BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008350
(569 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|330370545|gb|AEC12442.1| DNA (cytosine-5)-methyltransferase DRM1/2 [Gossypium hirsutum]
Length = 636
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/580 (73%), Positives = 494/580 (85%), Gaps = 14/580 (2%)
Query: 1 MIDHFVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSASSSASSSKSKLIDHFVGMGFS 60
+IDHFVGMGFS+E+V KAI+ENGE+N++LILEALL++SASS ASSS SKLIDHFVGMGFS
Sbjct: 59 LIDHFVGMGFSQELVTKAIEENGEENSNLILEALLQYSASSLASSSNSKLIDHFVGMGFS 118
Query: 61 VDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSPELDGSFLDGFSDTD 120
+MV KA+QENGE NTD+ILETLLTYSAL +S+ +QH +SD S + +G+FLD F+D D
Sbjct: 119 EEMVLKAVQENGEGNTDTILETLLTYSALEKSAPVQQHADSDDFSSDYEGNFLDDFTDID 178
Query: 121 SF-EGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKA 179
S + EEI NP D+E KL+ L MGYS EAS+AMERCGP++SIAELTDFICAAQMAKA
Sbjct: 179 SSSDTEEIINPGSDEESKLLYLTKMGYSEAEASVAMERCGPDSSIAELTDFICAAQMAKA 238
Query: 180 ADALLAEIEDKPRPKPSN-------GYHKHKKRRMLDYEKP---PIDEPIRLPNPMIGFG 229
ADAL + KP SN GY K+++ + EK +D+ + LPNPMIGFG
Sbjct: 239 ADALFPVEDRKPFCNGSNYNKRRNLGYDLWKRKKQMKLEKKLLNEVDDALHLPNPMIGFG 298
Query: 230 VPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAA 289
VP+ PD+I R+LPEAA GPPYFYYENVALAPKGVW TISRFLYDVEPEFVDSK+FCAAA
Sbjct: 299 VPTEPDLITQRTLPEAAVGPPYFYYENVALAPKGVWSTISRFLYDVEPEFVDSKFFCAAA 358
Query: 290 RKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTER 349
RKRGY+HNLPI+NR L+P PP+ I+EA PL+RKWWPSWD R+ LNC+QTC ASA+LTER
Sbjct: 359 RKRGYIHNLPIENRFPLLPFPPRTIHEAFPLTRKWWPSWDPRTKLNCIQTCTASARLTER 418
Query: 350 IRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRG 409
IRKALE DGEP P +VQK+V+DECRKWNLVWVGRNK+APLE DEVEMLLGFPKNHTRG
Sbjct: 419 IRKALEAYDGEP--PLNVQKYVLDECRKWNLVWVGRNKVAPLEADEVEMLLGFPKNHTRG 476
Query: 410 GGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMK 469
GG+SRTDRYKSLGNSFQVDTVAYHLSVLK+M+P GIN+LSLFSGIGGAEVALHRLG+ +K
Sbjct: 477 GGMSRTDRYKSLGNSFQVDTVAYHLSVLKDMFPGGINLLSLFSGIGGAEVALHRLGIPLK 536
Query: 470 NVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSP 529
NVVSV+ISEVNRNIVR WWEQTNQ+GTLID ADVQ+L+ +R+EQ+++ FGGFDLV+GGSP
Sbjct: 537 NVVSVEISEVNRNIVRGWWEQTNQRGTLIDIADVQELNGDRLEQLMSRFGGFDLVVGGSP 596
Query: 530 CNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQRN 569
CNNLAGSNRH RDGLEGKESSLF+DY RILDLV+ MQRN
Sbjct: 597 CNNLAGSNRHHRDGLEGKESSLFFDYCRILDLVR-CMQRN 635
>gi|255560872|ref|XP_002521449.1| conserved hypothetical protein [Ricinus communis]
gi|223539348|gb|EEF40939.1| conserved hypothetical protein [Ricinus communis]
Length = 686
Score = 831 bits (2147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/584 (71%), Positives = 489/584 (83%), Gaps = 19/584 (3%)
Query: 1 MIDHFVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSASSSASSSKSKLIDHFVGMGFS 60
++DHFVGMGF E++VA+AIQENGE+N DLILE LLK S SS SSS SKLIDHFVGMGF
Sbjct: 107 VMDHFVGMGFPEKMVAEAIQENGEENADLILETLLKFSTISSPSSSGSKLIDHFVGMGFD 166
Query: 61 VDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSPELDGSFLDGFSDTD 120
V+MV +AIQENGEE TDSILETLLTYS + +S Q + H++SD S E +GSFL+ FSD D
Sbjct: 167 VEMVDRAIQENGEEKTDSILETLLTYSVIEKSHQEQPHVDSDHWSSEYEGSFLNDFSDID 226
Query: 121 SFEGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAA 180
S E EE P + L LA MGY+ EASIA+ERCGP+ +IAELTDFICAAQMAKAA
Sbjct: 227 SSENEENGKSQPVEGNTLRFLARMGYTTDEASIALERCGPDANIAELTDFICAAQMAKAA 286
Query: 181 DALLAEIEDKPRPKP-SNGYHKHKKRRMLDYEKPPI--------------DEPIRLPNPM 225
DA E +KP+ + + Y K+KKR +Y+ DE IRLPNPM
Sbjct: 287 DASFPE--EKPKIRHFDDDYPKNKKRNYAEYDMWKKKKQMKLDKKLLNGDDELIRLPNPM 344
Query: 226 IGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYF 285
+GFGVP++P ++ HR LPEAA GPP+FYYENVALAPKGVW TISRFLYDVEPEFVDSKYF
Sbjct: 345 LGFGVPTDPAIVTHRKLPEAALGPPFFYYENVALAPKGVWQTISRFLYDVEPEFVDSKYF 404
Query: 286 CAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAK 345
CAAARKRGYVHNLPI+NR+ L+PLPP NI+EALPL+++WWPSWDTR+ LNCLQTC+ASAK
Sbjct: 405 CAAARKRGYVHNLPIQNRYPLLPLPPNNIHEALPLTKRWWPSWDTRTKLNCLQTCVASAK 464
Query: 346 LTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKN 405
LT+RIRKALE+ +GEP P ++K+V+DECRKWNL+WVGRNKLAPLEPDEVEMLLGFP+N
Sbjct: 465 LTDRIRKALEDYEGEP--PLSIRKYVLDECRKWNLLWVGRNKLAPLEPDEVEMLLGFPRN 522
Query: 406 HTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLG 465
HTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLK+M+P+GI++LSLFSGIGGAEVALHRLG
Sbjct: 523 HTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKDMFPEGISLLSLFSGIGGAEVALHRLG 582
Query: 466 VRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVI 525
+R+K VVSV+ISEVNRNI+R WWEQTNQ GTLID ADV L+A+R+EQ++++FGGFDLV+
Sbjct: 583 IRLKRVVSVEISEVNRNIMRCWWEQTNQTGTLIDIADVHDLNADRLEQLMSSFGGFDLVV 642
Query: 526 GGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQRN 569
GGSPCNNLAGSNRH RDGLEGKESSLF+DY RILDLVK +M RN
Sbjct: 643 GGSPCNNLAGSNRHHRDGLEGKESSLFFDYCRILDLVKCIMTRN 686
>gi|341868933|gb|AEK98590.1| domain rearranged methyltransferase [Vitis amurensis]
Length = 603
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 397/556 (71%), Positives = 457/556 (82%), Gaps = 27/556 (4%)
Query: 39 ASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQ------- 91
ASSS S SKLI+HF+GMGFS MV KAI+++GE NTDSILE LLTYSAL
Sbjct: 49 ASSSTGPSNSKLINHFIGMGFSEKMVVKAIEQDGEGNTDSILEYLLTYSALENCPQELEN 108
Query: 92 SSQAEQHINSDQNSPELDGSFLDGFSDTDS-FEGEEITNPDPDKEEKLVSLASMGYSVQE 150
S QAE + SD S + D SFLD FSDTDS E +E N DKE+KL+ LA MGY+V+E
Sbjct: 109 SPQAEPQVVSDNCSSDYDESFLDDFSDTDSCHENQENINSMSDKEKKLLFLADMGYTVEE 168
Query: 151 ASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPSN---GYHKHKKRRM 207
ASIAM+RCGP++S+ ELTDFI AAQ++KAADA L E+ D+ +P+P + Y+K KKR+
Sbjct: 169 ASIAMDRCGPDSSVVELTDFISAAQISKAADADLGELSDEEKPRPKHLYKDYNKQKKRKF 228
Query: 208 LDYE--------------KPPIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFY 253
LDY + DEPIRLPNPM+GFGVP+ P + HR+LPEAA GPPYFY
Sbjct: 229 LDYRLWERKKQRGYEKKLRNEDDEPIRLPNPMVGFGVPAEPCPVFHRTLPEAAVGPPYFY 288
Query: 254 YENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQN 313
YENVALAPKGVW TISRFLYDVEPEFVDSKYFCA ARKRGY+HNLPI+NR L+PLPP
Sbjct: 289 YENVALAPKGVWSTISRFLYDVEPEFVDSKYFCATARKRGYIHNLPIQNRFPLLPLPPLT 348
Query: 314 IYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMD 373
IYEALPL+RKWWPSWDTR+ LNC+QTC+ SAKLT+RIRKALEE DG P P VQK+V+D
Sbjct: 349 IYEALPLTRKWWPSWDTRTKLNCIQTCVGSAKLTDRIRKALEEWDGVP--PMSVQKYVLD 406
Query: 374 ECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYH 433
ECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYH
Sbjct: 407 ECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYH 466
Query: 434 LSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQ 493
SVLK+M+P GI +LSLFSGIGGAE+ALHRLG+ +KNVV+V+ISE NRNI+RSWWEQTNQ
Sbjct: 467 FSVLKDMFPGGITLLSLFSGIGGAEIALHRLGIPLKNVVAVEISETNRNILRSWWEQTNQ 526
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFY 553
+GTL+D ADVQQL+ +R+EQ+I+ FGGFDL++GGSPCNNLAGSNR SRDGLEGKES+LFY
Sbjct: 527 RGTLVDIADVQQLNGDRLEQLIHTFGGFDLIVGGSPCNNLAGSNRVSRDGLEGKESALFY 586
Query: 554 DYFRILDLVKNMMQRN 569
DYFRILDLVK +M RN
Sbjct: 587 DYFRILDLVKCIMGRN 602
>gi|359488834|ref|XP_002273972.2| PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Vitis
vinifera]
Length = 616
Score = 799 bits (2064), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/556 (71%), Positives = 457/556 (82%), Gaps = 27/556 (4%)
Query: 39 ASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQ------- 91
ASSS S SKLI+HF+GMGFS MV KAI+++GE NTDSILE LLTYSAL
Sbjct: 62 ASSSTGPSNSKLINHFMGMGFSEKMVVKAIEQDGEGNTDSILEYLLTYSALENCPQELEN 121
Query: 92 SSQAEQHINSDQNSPELDGSFLDGFSDTDS-FEGEEITNPDPDKEEKLVSLASMGYSVQE 150
S QAE + SD S + D SFLD FSDTDS E +E N DKE+KL+ LA MGY+V+E
Sbjct: 122 SPQAEPQVVSDNCSSDYDESFLDDFSDTDSCHENQENINSLSDKEKKLLFLADMGYTVEE 181
Query: 151 ASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPSN---GYHKHKKRRM 207
ASIAM+RCGP++S+ ELTDFI AAQ++KAADA L E+ D+ +P+P + Y+K KKR+
Sbjct: 182 ASIAMDRCGPDSSVVELTDFISAAQISKAADADLGELSDEEKPRPKHLYKDYNKQKKRKF 241
Query: 208 LDYE--------------KPPIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFY 253
LDY + DEPIRLPNPM+GFGVP+ P + HR+LPEAA GPPYFY
Sbjct: 242 LDYRLWERKKQRGYEKKLRNEDDEPIRLPNPMVGFGVPAEPCPVFHRTLPEAAVGPPYFY 301
Query: 254 YENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQN 313
YENVALAPKGVW TISRFLYDVEPEFVDSKYFCA ARKRGY+HNLPI+NR L+PLPP
Sbjct: 302 YENVALAPKGVWSTISRFLYDVEPEFVDSKYFCATARKRGYIHNLPIQNRFPLLPLPPLT 361
Query: 314 IYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMD 373
IYEALPL+RKWWPSWDTR+ LNC+QTC+ SAKLT+RIRKALEE DG P P VQK+V+D
Sbjct: 362 IYEALPLTRKWWPSWDTRTKLNCIQTCVGSAKLTDRIRKALEEWDGVP--PMSVQKYVLD 419
Query: 374 ECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYH 433
ECRKWNLVWVGRNKLAPLEPDEVEMLLGFP+NHTRGGGISRTDRYKSLGNSFQVDTVAYH
Sbjct: 420 ECRKWNLVWVGRNKLAPLEPDEVEMLLGFPRNHTRGGGISRTDRYKSLGNSFQVDTVAYH 479
Query: 434 LSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQ 493
SVLK+M+P GI +LSLFSGIGGAE+ALHRLG+ +KNVV+V+ISE NRNI+RSWWEQTNQ
Sbjct: 480 FSVLKDMFPGGITLLSLFSGIGGAEIALHRLGIPLKNVVAVEISETNRNILRSWWEQTNQ 539
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFY 553
+GTL+D ADVQQL+ +R+EQ+I+ FGGFDL++GGSPCNNLAGSNR SRDGLEGKES+LFY
Sbjct: 540 RGTLVDIADVQQLNGDRLEQLIHTFGGFDLIVGGSPCNNLAGSNRVSRDGLEGKESALFY 599
Query: 554 DYFRILDLVKNMMQRN 569
DYFRILDLVK +M RN
Sbjct: 600 DYFRILDLVKCIMGRN 615
>gi|449446682|ref|XP_004141100.1| PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Cucumis
sativus]
gi|449515567|ref|XP_004164820.1| PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Cucumis
sativus]
Length = 586
Score = 778 bits (2010), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/541 (71%), Positives = 447/541 (82%), Gaps = 11/541 (2%)
Query: 39 ASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQH 98
ASSSA S SK +D+F+GMGFS MVAKAI++NGEENTDSILETLLT SAL S +QH
Sbjct: 44 ASSSAGPSNSKTVDYFIGMGFSAKMVAKAIEDNGEENTDSILETLLTLSALENSPPKQQH 103
Query: 99 INSDQNSPELDGSFLDGFSDTDS-FEGEEITNPDPDKEEKLVSLASMGYSVQEASIAMER 157
+++D + + +GSFLD FSD DS +E E P D + K+ L MGYS EA A+ER
Sbjct: 104 VDTDDSFSDYEGSFLDDFSDLDSDYENEATAKPVSDADNKMTFLVDMGYSEDEAYAAIER 163
Query: 158 CGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPSNGYHKHKKRRMLD-----YEK 212
CG ++S AELTDFI AAQ++KAAD LL ++ +P+PK NG K KRR D +K
Sbjct: 164 CGVHSSFAELTDFISAAQISKAADVLLGDLPVRPKPKNLNGCSKLNKRRHYDDDTWKKKK 223
Query: 213 PPI-----DEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDT 267
P D+ IRLPNPMIGFGVP+ + VHR +PEAA GPPYFYYENVALAPKGVW+T
Sbjct: 224 PRCFEDEDDDTIRLPNPMIGFGVPNELCLTVHRKIPEAAMGPPYFYYENVALAPKGVWNT 283
Query: 268 ISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPS 327
ISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPI NR L+PLPP ++EALPL+R+WWPS
Sbjct: 284 ISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIHNRFPLLPLPPHTVHEALPLTRRWWPS 343
Query: 328 WDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNK 387
WDTR+ LNCLQTCI SA+LT+RIR+ALE+ DG +PP HVQKFV+++CRKWNLVWVG+NK
Sbjct: 344 WDTRTQLNCLQTCIGSARLTDRIRRALEDYDGVRDPPLHVQKFVVEQCRKWNLVWVGKNK 403
Query: 388 LAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINV 447
+APLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLK+M+P GIN+
Sbjct: 404 VAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKDMFPGGINL 463
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
LSLFSGIGGAEVALHRLG+ +KNVVSVDISEVNRNIVR WWEQTNQKGTLID ADVQ+LD
Sbjct: 464 LSLFSGIGGAEVALHRLGIPLKNVVSVDISEVNRNIVRCWWEQTNQKGTLIDLADVQELD 523
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQ 567
A+R++ +N FGGFDLV+GGSPCNNL GSNR++RDGLEGKES LFYDYFRILDLVK +
Sbjct: 524 ADRLQYYMNLFGGFDLVVGGSPCNNLTGSNRYTRDGLEGKESILFYDYFRILDLVKCIAT 583
Query: 568 R 568
+
Sbjct: 584 K 584
>gi|356511676|ref|XP_003524549.1| PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Glycine
max]
Length = 590
Score = 751 bits (1938), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/546 (69%), Positives = 426/546 (78%), Gaps = 26/546 (4%)
Query: 39 ASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQH 98
ASSSA + SK++DHFV MGFS +MV+K IQE GEEN D +LE LLTY AL SS+ +Q
Sbjct: 47 ASSSAVLANSKVLDHFVSMGFSREMVSKVIQEYGEENEDKLLEELLTYKALESSSRPQQR 106
Query: 99 INSDQNSPELDGSFLDGFSDTDSF-EGEEITNPDPDKEEKLVSLASMGYSVQEASIAMER 157
I D S E GS D FSDTD F + EEI + ++ L SL MGY EA IA+ER
Sbjct: 107 IEPDPCSSENAGSSWDDFSDTDIFSDDEEIAKTMSENDDTLRSLVKMGYKQVEALIAIER 166
Query: 158 CGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPK-PSNGYHKHKKRRMLDYE----K 212
GPN S+ EL DFI AQMAKA DALL P+ K N Y K KRR+ DYE K
Sbjct: 167 LGPNASLEELVDFIGVAQMAKAEDALLP-----PQEKLQYNDYAKSNKRRLYDYEVLGRK 221
Query: 213 PPID-------------EPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVAL 259
P E + LPNPMIGFGVP+ I HR LPE A GPPYFYYENVAL
Sbjct: 222 KPRGCEKKILNEDDEDAEALHLPNPMIGFGVPTESSFITHRRLPEDAIGPPYFYYENVAL 281
Query: 260 APKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALP 319
APKGVW TISRFLYDVEPEFVDSK+FCAAARKRGY+HNLPI+NR L+PLPP+ I+EA P
Sbjct: 282 APKGVWQTISRFLYDVEPEFVDSKFFCAAARKRGYIHNLPIQNRFPLLPLPPRTIHEAFP 341
Query: 320 LSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWN 379
L++KWWPSWD R+ LNCLQTCI SAKLTERIRKA+E D +PP VQK+V+ +CRKWN
Sbjct: 342 LTKKWWPSWDIRTKLNCLQTCIGSAKLTERIRKAVEIYD--EDPPESVQKYVLHQCRKWN 399
Query: 380 LVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKE 439
LVWVGRNK+APLEPDEVE LLGFP+NHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKE
Sbjct: 400 LVWVGRNKVAPLEPDEVETLLGFPRNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKE 459
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
MYP+GIN+LSLFSGIGGAEVALHRLG+ +KNVVSV+ SEVNRNIVRSWWEQTNQKG L D
Sbjct: 460 MYPNGINLLSLFSGIGGAEVALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLYD 519
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
DV++LD +R+EQ+++ FGGFDL++GGSPCNNLAGSNR SRDGLEGKESSLF+DYFRIL
Sbjct: 520 MDDVRELDGDRLEQLMSTFGGFDLIVGGSPCNNLAGSNRVSRDGLEGKESSLFFDYFRIL 579
Query: 560 DLVKNM 565
DLVKNM
Sbjct: 580 DLVKNM 585
>gi|356573315|ref|XP_003554807.1| PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Glycine
max]
Length = 625
Score = 749 bits (1933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/546 (68%), Positives = 426/546 (78%), Gaps = 25/546 (4%)
Query: 39 ASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQH 98
ASSSA + SK++DHFV MGFS +MV+K IQE GEEN D +LE LL+Y AL S Q +Q
Sbjct: 81 ASSSAVLANSKVLDHFVNMGFSREMVSKVIQEYGEENEDKLLEELLSYKALESSPQPQQR 140
Query: 99 INSDQNSPELDGSFLDGFSDTDSF-EGEEITNPDPDKEEKLVSLASMGYSVQEASIAMER 157
I D S E GS D FSDTD F + EEI + ++ L SL MGY +EA +A+ER
Sbjct: 141 IEPDPCSSENAGSSWDDFSDTDIFSDDEEIAKTMSENDDTLRSLVKMGYKQEEALVAIER 200
Query: 158 CGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPSNGYHKHKKRRMLDYEKPPIDE 217
GPN S+ EL DFI AQMAKA DALL E+K + N Y K KRR DYE +
Sbjct: 201 LGPNASLEELVDFIGVAQMAKAEDALLPP-EEKLQ---YNDYAKSNKRRFYDYEVLGRKK 256
Query: 218 P------------------IRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVAL 259
P + LPNPMIGFGVP+ I HR +PE A GPPYFYYENVAL
Sbjct: 257 PRGCEKKILNEDDDEEDEALHLPNPMIGFGVPTESSFITHRRIPEDAIGPPYFYYENVAL 316
Query: 260 APKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALP 319
APKGVW TISRFLYDV+PEFVDSK+FCAAARKRGY+HNLPI+NR L+PLPP+ I+EA P
Sbjct: 317 APKGVWQTISRFLYDVQPEFVDSKFFCAAARKRGYIHNLPIQNRFPLLPLPPRTIHEAFP 376
Query: 320 LSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWN 379
L++KWWPSWDTR+ LNCLQTCI SAKLTERIRKA+E D +PP VQKFV+ +CRKWN
Sbjct: 377 LTKKWWPSWDTRTKLNCLQTCIGSAKLTERIRKAVEIYD--EDPPESVQKFVLHQCRKWN 434
Query: 380 LVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKE 439
LVWVGRNK+APLEPDEVE LLGFP+NHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKE
Sbjct: 435 LVWVGRNKVAPLEPDEVETLLGFPRNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKE 494
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
MYP+GIN+LSLFSGIGGAEVALHRLG+ +KNVVSV+ SEVNRNIVRSWWEQTNQKG L D
Sbjct: 495 MYPNGINLLSLFSGIGGAEVALHRLGIPLKNVVSVEKSEVNRNIVRSWWEQTNQKGNLYD 554
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
DV++LD +R+EQ+++ FGGFDL++GGSPCNNLAGSNR SRDGLEGKESSLF+DYFRIL
Sbjct: 555 IDDVRELDGDRLEQLMSTFGGFDLIVGGSPCNNLAGSNRVSRDGLEGKESSLFFDYFRIL 614
Query: 560 DLVKNM 565
DLVKNM
Sbjct: 615 DLVKNM 620
>gi|233770214|gb|ACQ91180.1| DRM-type cytosine DNA-methyltransferase [Fragaria x ananassa]
gi|233770218|gb|ACQ91182.1| DRM-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 596
Score = 723 bits (1867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/568 (63%), Positives = 436/568 (76%), Gaps = 39/568 (6%)
Query: 34 LLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSS 93
L SSS S +K+ HFV MGFS MV+KA++E+GEE+TDSILE+LL Y+AL S+
Sbjct: 35 LCSGEGSSSPGPSNTKVFGHFVSMGFSHKMVSKAVKEHGEEDTDSILESLLLYNALENST 94
Query: 94 Q------------------AEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKE 135
+Q I+SD S + +GSFLDGFSD DS + EE P +++
Sbjct: 95 SEQDSPPEQDSPPEQCFPPQQQQIDSDPFSSDYEGSFLDGFSDLDSSDNEENFIPTSEED 154
Query: 136 EKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKP 195
+KLVSL +MGY+ EASIA+ERCG ++S+ +LTDFI AAQ +KA D +E+KPR
Sbjct: 155 KKLVSLVNMGYTEFEASIAIERCGVDSSLVDLTDFISAAQFSKAEDVHFP-LEEKPRRLH 213
Query: 196 SNGYHKHKKRRMLDY----EKPPI----------DEPIRLPNPMIGFGVPSNPDVIVHRS 241
+ KKR++ +Y K + DE + LPNPMIGFG P++ VHRS
Sbjct: 214 ID---DKKKRKLCEYAMSKRKKKVGLGNGIIEEDDEALHLPNPMIGFGTPTHL-CQVHRS 269
Query: 242 LPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIK 301
+PEAA GPPYFYYENVAL PKGVW+TISRFLYD+ PEFVDSKYFCAAARKRGYVHNLPI+
Sbjct: 270 IPEAARGPPYFYYENVALTPKGVWNTISRFLYDIPPEFVDSKYFCAAARKRGYVHNLPIE 329
Query: 302 NRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEP 361
NR L+PLPPQNI++A P++R+WWPSWD R LNCLQTC ASA+LTERIR AL++ +
Sbjct: 330 NRFPLIPLPPQNIFDAFPMTRRWWPSWDERRQLNCLQTCYASAQLTERIRLALKDYGEDE 389
Query: 362 EPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSL 421
PP V+++V+ ECRKWNL+WVG+NK+APLEPDEVEMLLGFP+NHTR GISRTDRYKSL
Sbjct: 390 VPPERVRRYVLHECRKWNLLWVGKNKVAPLEPDEVEMLLGFPRNHTR--GISRTDRYKSL 447
Query: 422 GNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR 481
GNSFQ+DTVAYHLSVLK+ +P+GIN+LSLFSGIGGAE+ALHRLG+RMKNVVSV+IS V+R
Sbjct: 448 GNSFQIDTVAYHLSVLKDRFPNGINLLSLFSGIGGAEIALHRLGIRMKNVVSVEISAVSR 507
Query: 482 NIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSR 541
+VR+WWEQTNQKG L ADVQ+L+A+R+E IN FGGFDLV+GGSPCNNLAGSNRH R
Sbjct: 508 TVVRTWWEQTNQKGNLYHLADVQELNADRLEHYINTFGGFDLVVGGSPCNNLAGSNRHHR 567
Query: 542 DGLEGKESSLFYDYFRILDLVKNMMQRN 569
DGLEGKESSLFYDYFRILD+VK +M N
Sbjct: 568 DGLEGKESSLFYDYFRILDIVKGLMASN 595
>gi|233770216|gb|ACQ91181.1| DRM-type cytosine DNA-methyltransferase [Fragaria x ananassa]
Length = 596
Score = 720 bits (1859), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/569 (63%), Positives = 439/569 (77%), Gaps = 41/569 (7%)
Query: 34 LLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSS 93
L SSS S +K+ HFV MGFS MV+KA++E+GEE+ DSILE+LL Y+AL ++S
Sbjct: 35 LCSGEGSSSPGPSNTKVFGHFVSMGFSHKMVSKAVKEHGEEDADSILESLLLYNAL-ENS 93
Query: 94 QAEQ-------------------HINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDK 134
+EQ I+SD S + +GSFLDGFSD DS + EE P ++
Sbjct: 94 TSEQDSPPEQDSPPEQFFPPQQQQIDSDPFSSDYEGSFLDGFSDLDSSDNEESFIPTSEE 153
Query: 135 EEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPK 194
++KLVSL +MGY+ EASIA+ERCG ++S+ +LTDFI AAQ +KA D +E+KPR
Sbjct: 154 DKKLVSLVNMGYTEFEASIAIERCGVDSSLVDLTDFISAAQFSKAEDVHFP-LEEKPRRL 212
Query: 195 PSNGYHKHKKRRMLDY----EKPPI----------DEPIRLPNPMIGFGVPSNPDVIVHR 240
+ HK KKR++ +Y K + DE + LPNPMIGFG P++ VHR
Sbjct: 213 HID--HK-KKRKLCEYAVSKRKKKVGLGNGIIEEDDEALHLPNPMIGFGTPTHL-CQVHR 268
Query: 241 SLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPI 300
S+PEAA GPPYFYYENVAL PKGVW+TISRFLYD+ PEFVDSKYFCAAARKRGY+HNLPI
Sbjct: 269 SIPEAARGPPYFYYENVALTPKGVWNTISRFLYDIPPEFVDSKYFCAAARKRGYIHNLPI 328
Query: 301 KNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGE 360
+NR L+PLPPQNI++A P++R+WWPSWD R LNCLQTC ASA+LTERIR AL++ +
Sbjct: 329 ENRFPLIPLPPQNIFDAFPMTRRWWPSWDERRQLNCLQTCYASAQLTERIRLALKDYGED 388
Query: 361 PEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKS 420
PP V+++V+ ECRKWNL+WVG+NK+APLEPDEVEMLLGFP+NHTR GISRTDRYKS
Sbjct: 389 EVPPERVRRYVLHECRKWNLLWVGKNKVAPLEPDEVEMLLGFPRNHTR--GISRTDRYKS 446
Query: 421 LGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVN 480
LGNSFQ+DTVAYHLSVLK+ +P+GIN+LSLFSGIGGAE+ALHRLG+RMKNVVSV+IS V+
Sbjct: 447 LGNSFQIDTVAYHLSVLKDRFPNGINLLSLFSGIGGAEIALHRLGIRMKNVVSVEISGVS 506
Query: 481 RNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHS 540
R +VR+WWEQTNQKG L ADVQ+L+A+R+E IN FGGFDLV+GGSPCNNLAGSNRH
Sbjct: 507 RTVVRTWWEQTNQKGNLYHLADVQELNADRLEHYINTFGGFDLVVGGSPCNNLAGSNRHH 566
Query: 541 RDGLEGKESSLFYDYFRILDLVKNMMQRN 569
RDGLEGKESSLFYDYFRILD+VK +M N
Sbjct: 567 RDGLEGKESSLFYDYFRILDIVKGLMTTN 595
>gi|411012955|gb|AFV99134.1| DRM-type cytosine DNA-methyltransferase 2 [Malus x domestica]
Length = 930
Score = 719 bits (1856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 370/579 (63%), Positives = 433/579 (74%), Gaps = 71/579 (12%)
Query: 32 EALLKHS-ASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENG------------------ 72
EA+++ +SSSA S +K++DHFV MGFS MV KAIQE+G
Sbjct: 196 EAIVRSGESSSSAGPSNTKVLDHFVAMGFSEKMVVKAIQEHGKSIVSFHFSKRFHTNGSI 255
Query: 73 --------EENTDSILETLLTYSALGQSSQAEQHINS-----------------DQNSPE 107
EENTDSILETLLTYSAL S + +Q + + D + +
Sbjct: 256 TALMEYPGEENTDSILETLLTYSALESSPEEKQEVETLQEVEPQEVEPQEADSDDFSLDD 315
Query: 108 LDGSFLDGFSDTDSF-EGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERCGPNTSIAE 166
D SFLD FSD DS + EEI NP +K K+ SL +MGY+++EASIA+ERCG ++++ E
Sbjct: 316 YDESFLDDFSDLDSCSDTEEIINPTSEKG-KIRSLVNMGYTMEEASIAIERCGTDSTVVE 374
Query: 167 LTDFICAAQMAKAADALLAEIEDKPRPKPSNGYHKHKKRRMLDYE--------------K 212
LTDFICAAQMA+A DALL IE+KP G H +KKR++L+YE +
Sbjct: 375 LTDFICAAQMARAEDALLP-IEEKP------GSHSYKKRKLLEYEILKKKKRQMRLCGNQ 427
Query: 213 PPIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFL 272
DE + LPNPM+GFG P++P V+ HR+LPEAA GPPYFYYENVALAPKGVW TISRFL
Sbjct: 428 GDDDETVHLPNPMVGFGTPTDPYVLTHRTLPEAAVGPPYFYYENVALAPKGVWTTISRFL 487
Query: 273 YDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRS 332
YDV+PEFVDSKYF AAARKRGYVHNLPI+NR L+P PP I +A PL+RKWWPSWD R
Sbjct: 488 YDVQPEFVDSKYFSAAARKRGYVHNLPIQNRFPLMPQPPDTIAKAFPLTRKWWPSWDNRE 547
Query: 333 HLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLE 392
LNCLQTCIASAKLTERIRKA+E+ DG EPP VQK+V+DECRKWNLVWVGRNK+APLE
Sbjct: 548 KLNCLQTCIASAKLTERIRKAIEQFDG--EPPERVQKYVLDECRKWNLVWVGRNKVAPLE 605
Query: 393 PDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFS 452
PDEVEMLLGFPKNHTR GISRTDRYKSLGNSFQVDTVAYHLSVLK+MYP+GINVLSLF+
Sbjct: 606 PDEVEMLLGFPKNHTR--GISRTDRYKSLGNSFQVDTVAYHLSVLKDMYPNGINVLSLFT 663
Query: 453 GIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIE 512
GIGGAEVALHRLGV +KNV+SV+ISEVNRN+V SWWEQTNQ+G L DVQQL+ + +E
Sbjct: 664 GIGGAEVALHRLGVPLKNVISVEISEVNRNVVSSWWEQTNQRGRLQHVDDVQQLNGDHLE 723
Query: 513 QMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSL 551
Q ++ FGGFDLVIGGSPCNNLAGSNRH RDGLEG E +
Sbjct: 724 QYMSEFGGFDLVIGGSPCNNLAGSNRHHRDGLEGGEGKI 762
>gi|169977330|emb|CAQ18912.1| domains rearranged methyltransferase [Nicotiana sylvestris]
gi|169977332|emb|CAQ18913.1| domains rearranged methyltransferase [Nicotiana sylvestris]
gi|169977334|emb|CAQ18914.1| domains rearranged methyltransferase [Nicotiana sylvestris]
gi|169977336|emb|CAQ18915.1| domains rearranged methyltransferase [Nicotiana sylvestris]
Length = 608
Score = 712 bits (1838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/566 (65%), Positives = 432/566 (76%), Gaps = 45/566 (7%)
Query: 39 ASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQH 98
ASSS+ +SK I FV MGF +AKAI++NGE N+D +L+ LLT+ AL S + +
Sbjct: 51 ASSSSVPCQSKFIQQFVVMGFPEASIAKAIEQNGE-NSDLVLDALLTFKALEDSPEEQPS 109
Query: 99 ------INSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKE--------------EKL 138
INSD +S E + +FLD + DS+ + + + K+ + L
Sbjct: 110 ASPQPCINSDDSSSEYNENFLDDVYEEDSWSSDSDSCRNSAKQCYVKVESSSSSEKEQTL 169
Query: 139 VSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPS-- 196
LASMGY +EASIAMERCGP+ S+AELTDFICAAQMA+A D L E +PK +
Sbjct: 170 SFLASMGYPAEEASIAMERCGPDASVAELTDFICAAQMARAEDVYLPE---DVKPKLNHI 226
Query: 197 -NGYHKHKKRRMLD-----------YEKPPIDEPIRLPNPMIGFGVPSN-PDVIVHRSLP 243
NG +KKR+M + +E +E IRLP PMIGFGVP+ +V R+LP
Sbjct: 227 LNGSGGYKKRKMYNELCKRKKAKAIFE----EETIRLPKPMIGFGVPTELVPAMVQRTLP 282
Query: 244 EAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNR 303
E A GPP+FYYENVALAPKGVWDTISRFLYD+EPEFVDSKYFCAAARKRGY+HNLPI+NR
Sbjct: 283 EQAVGPPFFYYENVALAPKGVWDTISRFLYDIEPEFVDSKYFCAAARKRGYIHNLPIENR 342
Query: 304 HHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEP 363
L PL P+ I+EALPLS+KWWPSWD R+ LNCLQT I SA+LT RIRKA+E+ DGEP
Sbjct: 343 FPLFPLAPRTIHEALPLSKKWWPSWDPRTKLNCLQTAIGSAQLTNRIRKAVEDFDGEP-- 400
Query: 364 PHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGN 423
P VQKFV+D+CRKWNLVWVGRNK+APLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGN
Sbjct: 401 PMRVQKFVLDQCRKWNLVWVGRNKVAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGN 460
Query: 424 SFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNI 483
SFQVDTVAYHLSVLK ++PDGINVLSLFSGIGG EVAL+RLG+ + VVSV+ SEVNR+I
Sbjct: 461 SFQVDTVAYHLSVLKNLFPDGINVLSLFSGIGGGEVALYRLGIPLNTVVSVEKSEVNRDI 520
Query: 484 VRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDG 543
VRSWWEQTNQKG LI F DVQQL+ +R+EQ+I +FGGFDLVIGGSPCNNLAGSNR SRDG
Sbjct: 521 VRSWWEQTNQKGNLIHFNDVQQLNGDRLEQLIESFGGFDLVIGGSPCNNLAGSNRVSRDG 580
Query: 544 LEGKESSLFYDYFRILDLVKNMMQRN 569
LEGKESSLFYDY RILDLVK++M R+
Sbjct: 581 LEGKESSLFYDYVRILDLVKSIMSRH 606
>gi|29467228|dbj|BAC67060.1| DNA methyltransferase [Nicotiana tabacum]
Length = 608
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/566 (64%), Positives = 432/566 (76%), Gaps = 45/566 (7%)
Query: 39 ASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQH 98
ASSS+ +SK I FV MGF +AKAI++NGE+ +D +L+ LLT+ AL S + +
Sbjct: 51 ASSSSVPCQSKFIQQFVVMGFPEASIAKAIEQNGED-SDLVLDALLTFKALEDSPEEQPS 109
Query: 99 ------INSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKE--------------EKL 138
INSD +S E + + LD + DS+ + + + K+ + L
Sbjct: 110 ASPQPCINSDDSSSEYNENLLDDVYEEDSWSSDSDSCRNSAKQCYVKVESSSSSEKEQTL 169
Query: 139 VSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPS-- 196
+ LASMGY +EASIAMERCGP S+AELTDFICAAQMA+A D L E +PK +
Sbjct: 170 LFLASMGYPAEEASIAMERCGPEASVAELTDFICAAQMARAEDVYLPE---DVKPKLNHI 226
Query: 197 -NGYHKHKKRRMLD-----------YEKPPIDEPIRLPNPMIGFGVPSNP-DVIVHRSLP 243
NG +KKR+M + +E +E IRLP PMIGFGVP+ P +V R+LP
Sbjct: 227 LNGSGGYKKRKMYNELCKRKKAKAIFE----EETIRLPKPMIGFGVPTEPLPAMVRRTLP 282
Query: 244 EAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNR 303
E A GPP+FYYENVALAPKGVWDTISRFLYD+EPEFVDSKYFCAAARKRGY+HNLP++NR
Sbjct: 283 EQAVGPPFFYYENVALAPKGVWDTISRFLYDIEPEFVDSKYFCAAARKRGYIHNLPVENR 342
Query: 304 HHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEP 363
L PL P+ I+EALPLS+KWWPSWD R+ LNCLQT I SA+LT RIRKA+E+ DGEP
Sbjct: 343 FPLFPLAPRTIHEALPLSKKWWPSWDPRTKLNCLQTAIGSAQLTNRIRKAVEDFDGEP-- 400
Query: 364 PHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGN 423
P VQKFV+D+CRKWNLVWVGRNK+APLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGN
Sbjct: 401 PMRVQKFVLDQCRKWNLVWVGRNKVAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGN 460
Query: 424 SFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNI 483
SFQVDTVAYHLSVLK+++P GINVLSLFSGIGG EVAL+RLG+ + VVSV+ SEVNR+I
Sbjct: 461 SFQVDTVAYHLSVLKDLFPGGINVLSLFSGIGGGEVALYRLGIPLNTVVSVEKSEVNRDI 520
Query: 484 VRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDG 543
VRSWWEQTNQ+G LI F DVQQL+ +R+EQ+I +FGGFDLVIGGSPCNNLAGSNR SRDG
Sbjct: 521 VRSWWEQTNQRGNLIHFNDVQQLNGDRLEQLIESFGGFDLVIGGSPCNNLAGSNRVSRDG 580
Query: 544 LEGKESSLFYDYFRILDLVKNMMQRN 569
LEGKESSLFYDY RILDLVK++M R+
Sbjct: 581 LEGKESSLFYDYVRILDLVKSIMSRH 606
>gi|296087643|emb|CBI34899.3| unnamed protein product [Vitis vinifera]
Length = 512
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/500 (69%), Positives = 406/500 (81%), Gaps = 27/500 (5%)
Query: 55 VGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQ-------SSQAEQHINSDQNSPE 107
+GMGFS MV KAI+++GE NTDSILE LLTYSAL S QAE + SD S +
Sbjct: 1 MGMGFSEKMVVKAIEQDGEGNTDSILEYLLTYSALENCPQELENSPQAEPQVVSDNCSSD 60
Query: 108 LDGSFLDGFSDTDS-FEGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERCGPNTSIAE 166
D SFLD FSDTDS E +E N DKE+KL+ LA MGY+V+EASIAM+RCGP++S+ E
Sbjct: 61 YDESFLDDFSDTDSCHENQENINSLSDKEKKLLFLADMGYTVEEASIAMDRCGPDSSVVE 120
Query: 167 LTDFICAAQMAKAADALLAEIEDKPRPKPSN---GYHKHKKRRMLDYE------------ 211
LTDFI AAQ++KAADA L E+ D+ +P+P + Y+K KKR+ LDY
Sbjct: 121 LTDFISAAQISKAADADLGELSDEEKPRPKHLYKDYNKQKKRKFLDYRLWERKKQRGYEK 180
Query: 212 --KPPIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTIS 269
+ DEPIRLPNPM+GFGVP+ P + HR+LPEAA GPPYFYYENVALAPKGVW TIS
Sbjct: 181 KLRNEDDEPIRLPNPMVGFGVPAEPCPVFHRTLPEAAVGPPYFYYENVALAPKGVWSTIS 240
Query: 270 RFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWD 329
RFLYDVEPEFVDSKYFCA ARKRGY+HNLPI+NR L+PLPP IYEALPL+RKWWPSWD
Sbjct: 241 RFLYDVEPEFVDSKYFCATARKRGYIHNLPIQNRFPLLPLPPLTIYEALPLTRKWWPSWD 300
Query: 330 TRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLA 389
TR+ LNC+QTC+ SAKLT+RIRKALEE DG P P VQK+V+DECRKWNLVWVGRNKLA
Sbjct: 301 TRTKLNCIQTCVGSAKLTDRIRKALEEWDGVP--PMSVQKYVLDECRKWNLVWVGRNKLA 358
Query: 390 PLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLS 449
PLEPDEVEMLLGFP+NHTRGGGISRTDRYKSLGNSFQVDTVAYH SVLK+M+P GI +LS
Sbjct: 359 PLEPDEVEMLLGFPRNHTRGGGISRTDRYKSLGNSFQVDTVAYHFSVLKDMFPGGITLLS 418
Query: 450 LFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDAN 509
LFSGIGGAE+ALHRLG+ +KNVV+V+ISE NRNI+RSWWEQTNQ+GTL+D ADVQQL+ +
Sbjct: 419 LFSGIGGAEIALHRLGIPLKNVVAVEISETNRNILRSWWEQTNQRGTLVDIADVQQLNGD 478
Query: 510 RIEQMINAFGGFDLVIGGSP 529
R+EQ+I+ FGGFDL++ SP
Sbjct: 479 RLEQLIHTFGGFDLIVVTSP 498
>gi|357483267|ref|XP_003611920.1| DNA (cytosine-5)-methyltransferase DRM2 [Medicago truncatula]
gi|355513255|gb|AES94878.1| DNA (cytosine-5)-methyltransferase DRM2 [Medicago truncatula]
Length = 751
Score = 695 bits (1793), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/548 (64%), Positives = 419/548 (76%), Gaps = 24/548 (4%)
Query: 39 ASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQH 98
ASS A S +K++DHF+ MGF ++V+K IQE GEE+ D +LE +LTYSAL SSQ Q
Sbjct: 45 ASSFAGPSNTKVLDHFISMGFPGEVVSKVIQEYGEEDEDKLLEEILTYSALESSSQQHQQ 104
Query: 99 INSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERC 158
+ D S E GS D SD DSF EE+ ++ L+SL +MG+ +EA +A+ER
Sbjct: 105 VEPDPTSSEYAGSSWDDLSDGDSFSDEEMPKSVSRNDDTLLSLVNMGFKEEEALMAIERL 164
Query: 159 GP---NTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPSNGYHKHKKRRMLDYE---- 211
G ++S+ +L DFI AQ+ K D+LL EDK + +G+ K +KR + +YE
Sbjct: 165 GVLRLDSSLDDLVDFIGVAQLVKEEDSLLPP-EDKV--QQCSGHSKPRKRSLYEYEVLGK 221
Query: 212 --------KPPIDE-----PIRLPNPMIGFGVPSNP-DVIVHRSLPEAAAGPPYFYYENV 257
+ P +E + LPNPM+GFGVP+ P +I HR+LPE A GPPYFYYENV
Sbjct: 222 KKRKVSDKRTPCEEEDDGQTLNLPNPMMGFGVPNEPKSIITHRTLPENAIGPPYFYYENV 281
Query: 258 ALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEA 317
AL PKGVW TISRFLYDV+PE+VDSKYFCAAARKRGYVHNLPI NR L+PLPP+ I +A
Sbjct: 282 ALTPKGVWQTISRFLYDVQPEYVDSKYFCAAARKRGYVHNLPIANRFPLLPLPPRTILDA 341
Query: 318 LPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRK 377
PL RKWWPSWD R +LNCLQT SA+ T+RIRK LE C+ EP V+K+V+++CRK
Sbjct: 342 FPLLRKWWPSWDPRKNLNCLQTVHGSAQTTDRIRKKLESCEEFEEPSESVKKYVLEQCRK 401
Query: 378 WNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVL 437
WNLVWVG+NK+APLEPDEVEMLLGFP+NHTRGGGISRTDR+KSLGNSFQVDTVAYHLSVL
Sbjct: 402 WNLVWVGKNKVAPLEPDEVEMLLGFPRNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVL 461
Query: 438 KEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTL 497
KEMYP+GIN+LSLFSGIGGAEVALHRLGV + NVVSV+ SEVNRNIVRSWWEQTNQKG L
Sbjct: 462 KEMYPNGINLLSLFSGIGGAEVALHRLGVPLNNVVSVEKSEVNRNIVRSWWEQTNQKGNL 521
Query: 498 IDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
ID DVQQLDA R+EQ+++A GGFDLV+GGSPCNNLAGSNR SR GLEG ES+LFYDYFR
Sbjct: 522 IDIDDVQQLDAERLEQLMSACGGFDLVVGGSPCNNLAGSNRVSRIGLEGTESALFYDYFR 581
Query: 558 ILDLVKNM 565
ILDLVK M
Sbjct: 582 ILDLVKAM 589
>gi|357495801|ref|XP_003618189.1| DNA (cytosine-5)-methyltransferase DRM1 [Medicago truncatula]
gi|355493204|gb|AES74407.1| DNA (cytosine-5)-methyltransferase DRM1 [Medicago truncatula]
Length = 588
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/546 (63%), Positives = 420/546 (76%), Gaps = 22/546 (4%)
Query: 40 SSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHI 99
SS A S +K+ DHF+ MGF ++V+K IQE+GEEN + +L +LTYS L S Q +Q
Sbjct: 46 SSFAGPSNTKVFDHFISMGFPGEVVSKVIQEHGEENEEKLLNEILTYSVLESSPQQQQPA 105
Query: 100 NSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERCG 159
D S E GS + S+ D F EE+ D ++ L L MG+ +EA +A++R G
Sbjct: 106 ELDPTSSECAGSSWEDLSEDDFFSDEELPKFDSTNDDTLTKLVKMGFEEEEALVAIDRIG 165
Query: 160 PNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPSNGYHKHKKRRMLDYE-----KPP 214
+ S+ L DFI AAQ+AKA +ALL EDKP +G K KKR + +YE +P
Sbjct: 166 SD-SLEALVDFIGAAQVAKAENALLLP-EDKPG---CSGNPKLKKRSLYEYEVLGKKRPK 220
Query: 215 ID-----------EPIRLPNPMIGFGVPSNPD-VIVHRSLPEAAAGPPYFYYENVALAPK 262
++ + + LPNPM+GFG+P+ P +I HR LPE A GPPYFYYENVALAPK
Sbjct: 221 LEKRTLCEDEEEAQTLNLPNPMMGFGIPNEPSSMITHRRLPENAVGPPYFYYENVALAPK 280
Query: 263 GVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSR 322
GVW TISRFLYDVEPE+VDSKYFCAAARKRGY+HNLPI NR L+PLPP+ I++A PL R
Sbjct: 281 GVWQTISRFLYDVEPEYVDSKYFCAAARKRGYIHNLPIVNRFPLLPLPPRTIHDAFPLLR 340
Query: 323 KWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVW 382
+WWP+WD R+ LNCLQT ASAKLT+RIRKA+E CD EP V+K+V+D+CRKWNLVW
Sbjct: 341 RWWPTWDPRTKLNCLQTVHASAKLTDRIRKAVESCDDFEEPSETVKKYVLDQCRKWNLVW 400
Query: 383 VGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYP 442
VG+NK+APLEPDEVEMLLGFP+NHTRGGGISRTDR+KSLGNSFQVDTVAYHLSVLKEMYP
Sbjct: 401 VGKNKVAPLEPDEVEMLLGFPRNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLKEMYP 460
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD 502
G+N+LSLFSGIGGAEVALHRLG+ ++NVVSV+ SEVNRNIVRSWWEQTNQ+G L+DF D
Sbjct: 461 KGVNLLSLFSGIGGAEVALHRLGIPLRNVVSVEKSEVNRNIVRSWWEQTNQRGNLVDFDD 520
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
VQQLDA+R+E+++ AFGGFDL++GGSPCNNLAGSNR SR+GLEG ES LFY+YFRILDLV
Sbjct: 521 VQQLDADRLERLMGAFGGFDLIVGGSPCNNLAGSNRVSRNGLEGSESILFYEYFRILDLV 580
Query: 563 KNMMQR 568
K M R
Sbjct: 581 KVMAPR 586
>gi|350534774|ref|NP_001233903.1| DNA cytosine 5-methyltransferase-like [Solanum lycopersicum]
gi|164470590|gb|ABY58121.1| putative DNA cytosine 5-methyltransferase [Solanum lycopersicum]
Length = 602
Score = 693 bits (1788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/560 (63%), Positives = 429/560 (76%), Gaps = 37/560 (6%)
Query: 39 ASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQA--- 95
ASSS+ +S I F+ MGFS + +AKAI++NGE N+D +L+ LLT A+ S +
Sbjct: 48 ASSSSVPGQSTFIQKFLVMGFSEESIAKAIEQNGE-NSDLVLDALLTLKAIEDSPEEQPS 106
Query: 96 -----EQHINSDQNSPELDGSFLDGFSD-----------TDSFEG---EEITNPDPDKEE 136
E INSD +S E + +FLD D T+S + +E +N +KE+
Sbjct: 107 ASPHLEPCINSDDSSSEYNENFLDDVYDEDSWSSDSDYCTNSVKQCYVKEESNSLSEKEQ 166
Query: 137 KLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPS 196
++ LA+MGY V+E SIAMERCGP S++ELTDFICAAQMA+ D L E +PK +
Sbjct: 167 TILFLANMGYPVEEVSIAMERCGPEASVSELTDFICAAQMAREEDPYLPE---DVKPKLN 223
Query: 197 NGYHKHKKRRMLDY----EKPPI---DEPIRLPNPMIGFGVPSNP-DVIVHRSLPEAAAG 248
+G +KKR+M + +KP +E IRLP PMIGFGVP+ IV R++PE A G
Sbjct: 224 HGSGGYKKRKMFNQLCKSKKPRAIFDEETIRLPKPMIGFGVPTESVSAIVRRTIPEQAFG 283
Query: 249 PPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVP 308
PP+FYYENVALAPKGVWDTISRFLYD+EPEFVDSKYFCA ARKRGY+HNLP +NR L+P
Sbjct: 284 PPFFYYENVALAPKGVWDTISRFLYDIEPEFVDSKYFCATARKRGYIHNLPTENRFPLLP 343
Query: 309 LPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQ 368
LPP+ I EALPL++KWWPSWD R+ LNCLQT I SA+LT+RIRKA+E DGEP P VQ
Sbjct: 344 LPPRTINEALPLTKKWWPSWDPRTKLNCLQTAIGSARLTDRIRKAVEAFDGEP--PMRVQ 401
Query: 369 KFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVD 428
KFV+D+CRKWNLVWVGRNK+AP + +G PKNHTRGGGISRTDRYKSLGNSFQVD
Sbjct: 402 KFVLDQCRKWNLVWVGRNKVAPWS-QRIGNAIGVPKNHTRGGGISRTDRYKSLGNSFQVD 460
Query: 429 TVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWW 488
TVAYHLSVLK+M+P+G+NVLSLFSGIGGAEVAL+RLG+++ NVVSV+ SEVNRNIVRSWW
Sbjct: 461 TVAYHLSVLKDMFPNGMNVLSLFSGIGGAEVALYRLGIQLNNVVSVEKSEVNRNIVRSWW 520
Query: 489 EQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKE 548
EQTNQ+G LIDF DVQQL+ +R+EQ+I++ GGFDL+IGGSPCNNLAGSNR SRDGLEGKE
Sbjct: 521 EQTNQRGNLIDFDDVQQLNGDRLEQLIDSCGGFDLLIGGSPCNNLAGSNRVSRDGLEGKE 580
Query: 549 SSLFYDYFRILDLVKNMMQR 568
SSLFYDY RILDLVK++M R
Sbjct: 581 SSLFYDYVRILDLVKSIMSR 600
>gi|357456233|ref|XP_003598397.1| DNA (cytosine-5)-methyltransferase DRM2 [Medicago truncatula]
gi|358348372|ref|XP_003638221.1| DNA (cytosine-5)-methyltransferase DRM2 [Medicago truncatula]
gi|355487445|gb|AES68648.1| DNA (cytosine-5)-methyltransferase DRM2 [Medicago truncatula]
gi|355504156|gb|AES85359.1| DNA (cytosine-5)-methyltransferase DRM2 [Medicago truncatula]
Length = 628
Score = 686 bits (1769), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/546 (63%), Positives = 415/546 (76%), Gaps = 20/546 (3%)
Query: 39 ASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQH 98
A SSA S +K++DHF+ MGF ++V+K IQE GEE+ D +LE +LTYSAL SSQ Q
Sbjct: 45 ARSSAGPSNTKVLDHFISMGFPGEVVSKVIQEYGEEDEDKLLEEILTYSALESSSQQHQQ 104
Query: 99 INSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERC 158
+ D S E GS D SD +SF EE ++ L+SL +MG+ +EA +A+ER
Sbjct: 105 VEPDPTSSEYAGSSWDDLSDGNSFSDEETPKSVSRNDDTLLSLVNMGFKEEEALMAIERL 164
Query: 159 GP---NTSIAELTDFICAAQMAKAADALLAEIEDK-------PRPKPSNGYHKH---KKR 205
G ++S+ +L DFI AQ+ K D+LL EDK P+P+ + Y KK+
Sbjct: 165 GVLRLDSSLDDLVDFIGVAQLVKEEDSLLPP-EDKVQQCSGHPKPRKRSLYEYEVLGKKK 223
Query: 206 RMLDYEKPPIDE-----PIRLPNPMIGFGVPSNP-DVIVHRSLPEAAAGPPYFYYENVAL 259
R + ++ P +E + LPNPM+GFGVP+ P +I HR+LPE A GPPYFYYENVA+
Sbjct: 224 RKVSDKRTPCEEEDDGQTLNLPNPMMGFGVPNEPKSIITHRTLPENAIGPPYFYYENVAI 283
Query: 260 APKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALP 319
PKGVW ISRFLYDV+PE+VDSKYFCAAARKRGYVHNLPI NR L+PLPP+ I +A P
Sbjct: 284 TPKGVWQKISRFLYDVQPEYVDSKYFCAAARKRGYVHNLPIANRFPLLPLPPRTILDAFP 343
Query: 320 LSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWN 379
R+WWPSWD R +LNCLQT SA+ T+RIRK LE C+ EP V+K+V+++CRKWN
Sbjct: 344 PLRRWWPSWDPRKNLNCLQTVHGSAQTTDRIRKKLESCEEFEEPSESVKKYVLEQCRKWN 403
Query: 380 LVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKE 439
LVWVG+NK+APLEPDEVEMLLGFPKNHTRGGGISRTDR+KSLGNSFQVDTVAYHLSVLKE
Sbjct: 404 LVWVGKNKVAPLEPDEVEMLLGFPKNHTRGGGISRTDRFKSLGNSFQVDTVAYHLSVLKE 463
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
MYP+GIN+LSLFSGIGGAEVALHRLGV + NVVSV+ SEVNRNIVRSWW+QTNQKG LID
Sbjct: 464 MYPNGINLLSLFSGIGGAEVALHRLGVPLNNVVSVEKSEVNRNIVRSWWDQTNQKGNLID 523
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
DVQ LDA R+EQ+++A GGFDLVIGGSPCNNLAGSNR SR GLEG ES+LFYDYFRIL
Sbjct: 524 LDDVQHLDAERLEQLMSACGGFDLVIGGSPCNNLAGSNRVSRIGLEGTESALFYDYFRIL 583
Query: 560 DLVKNM 565
DLVK M
Sbjct: 584 DLVKAM 589
>gi|297807559|ref|XP_002871663.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297317500|gb|EFH47922.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 593
Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/578 (59%), Positives = 431/578 (74%), Gaps = 32/578 (5%)
Query: 2 IDHFVGMGFSEEVVAKAIQENGEQNTD--LILEALLKHSASSSASSSKSKLIDHFVGMGF 59
+ F+ MGFS E++A+AI+E G N++ +ILE L +SAS+ ASSSKSK+IDHF+GMGF
Sbjct: 26 VASFIEMGFSSEMIARAIEETGGANSEPRMILETLFNYSASTEASSSKSKVIDHFIGMGF 85
Query: 60 SVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSPELDGSFLDGFSDT 119
+ V KAIQE G+EN D I+ LLTY+ + + + + + + N+ + D + SD
Sbjct: 86 PEENVIKAIQEYGDENIDDIMNALLTYAEVDRLGETK---DVNINTTDDDDNLYSLSSDD 142
Query: 120 DSFEGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKA 179
D E+ N ++ L +L M YS +EA+IA+ERCG + S+ E+ DFICAAQMA+
Sbjct: 143 D----EDELNNSSQEDSILQALIKMDYSREEAAIAIERCGEDASVEEVVDFICAAQMARQ 198
Query: 180 ADALLAEIEDKPRPKPSNGYHKHKKRRMLDYEKPPI-----------DEPIRLPNPMIGF 228
D AE DK P + KKRR Y +PP D+ I LP MIGF
Sbjct: 199 FDEFFAE-PDKKEP-----MNNSKKRRT--YNEPPRRERKPNTAMANDQLIYLPKEMIGF 250
Query: 229 GVPSNPDVIVHRSLP--EAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFC 286
GVP+ P ++++R++P + A GPP+FYYENVA+APKGVW TIS LYD+ PEFVDSK+FC
Sbjct: 251 GVPNRPGLMMNRAVPVPDIACGPPFFYYENVAMAPKGVWATISSHLYDILPEFVDSKHFC 310
Query: 287 AAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKL 346
AAARKRGY+HNLPI+NR + P P I EALPL+++WWPSWD R+ LNCL TCIASAKL
Sbjct: 311 AAARKRGYIHNLPIQNRFQIQPQPHNTIQEALPLTKRWWPSWDERTKLNCLLTCIASAKL 370
Query: 347 TERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNH 406
T RIR+ALE+ DGEP P VQK VM +C+KWNLVWVG+NKLAPLEPDE+E LLGFP++H
Sbjct: 371 TNRIREALEKYDGEP--PLQVQKQVMYQCKKWNLVWVGKNKLAPLEPDEMEKLLGFPRDH 428
Query: 407 TRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGV 466
TRGGGISRTDRYKSLGNSFQVDTVAYHLSVLK ++P+GI VLSLF+GIGG EVALHRL +
Sbjct: 429 TRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKPLFPNGIKVLSLFTGIGGGEVALHRLQI 488
Query: 467 RMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIG 526
RM VVSV+ISE NRNI+RS+WEQTNQKG L +F DV++LD N IEQ+++ +GGFDLVIG
Sbjct: 489 RMNVVVSVEISEANRNILRSFWEQTNQKGILREFKDVEKLDDNTIEQLMDEYGGFDLVIG 548
Query: 527 GSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
GSPCNNLAG NRHSR GLEG+ SSLF+DY RIL+ V++
Sbjct: 549 GSPCNNLAGGNRHSRVGLEGEHSSLFFDYCRILETVRH 586
>gi|297811595|ref|XP_002873681.1| hypothetical protein ARALYDRAFT_488304 [Arabidopsis lyrata subsp.
lyrata]
gi|297319518|gb|EFH49940.1| hypothetical protein ARALYDRAFT_488304 [Arabidopsis lyrata subsp.
lyrata]
Length = 629
Score = 677 bits (1746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/569 (58%), Positives = 426/569 (74%), Gaps = 22/569 (3%)
Query: 8 MGFSEEVVAKAIQENG-EQNTDLILEALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAK 66
MGF E++A+AI+E G T +I++ + K+S++ A SSKSK IDHF+ MGF + V K
Sbjct: 76 MGFPVEMIARAIKETGPNAETSVIIDTISKYSSNCEAGSSKSKAIDHFLAMGFDEEKVIK 135
Query: 67 AIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEE 126
AIQE+GEEN ++I LL+ + + E+ D +S + +SD + E+
Sbjct: 136 AIQEHGEENMEAIANALLSCAEAEKLPVVEEEDVIDWSSDDETN-----YSDILVSDDEK 190
Query: 127 ITNPDPDKEE---KLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADAL 183
DP+ +E ++ SL MG+S EAS+A+ERCG N IAELTDF+CAA+MA+
Sbjct: 191 ----DPNSKENSNQIRSLVRMGFSELEASLAVERCGENVDIAELTDFLCAAKMAREFSEF 246
Query: 184 LAEIEDKPRPKPSNGYHKHKKRRMLDYEKPPI---DEPIRLPNPMIGFGVPSNPDVIVHR 240
+ E++ KP N KKRR+ ++P DEP+RLPNPMIGFGVP+ P +I HR
Sbjct: 247 HTDPEER---KPRNDI---KKRRLESKKEPRSSVDDEPVRLPNPMIGFGVPNEPGLITHR 300
Query: 241 SLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPI 300
SLPE A GPP+FYYENVAL PKGVW+TISR L+D+ PEFVDSKYFCAAARKRGY+HNLPI
Sbjct: 301 SLPELARGPPFFYYENVALTPKGVWETISRHLFDIPPEFVDSKYFCAAARKRGYIHNLPI 360
Query: 301 KNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGE 360
NR + P P I++A PLS++WWP WD R+ LNC+ TC SA+LT RIR ALE +GE
Sbjct: 361 NNRFQIQPPPKYTIHDAFPLSKRWWPDWDKRTKLNCILTCTGSAQLTNRIRLALEPYNGE 420
Query: 361 PEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKS 420
PEPP HVQ++V+D+CR+WNLVWVG+NK APLEPDE+E +LGFPKNHTRGGG+SRT+RYKS
Sbjct: 421 PEPPKHVQRYVIDQCRRWNLVWVGKNKAAPLEPDEMENILGFPKNHTRGGGMSRTERYKS 480
Query: 421 LGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVN 480
LGNSFQVDTVAYHLSVLK ++P GINVLSLF+GIGG EVALHRL +RMK VVSV+IS+VN
Sbjct: 481 LGNSFQVDTVAYHLSVLKPIFPHGINVLSLFTGIGGGEVALHRLQIRMKLVVSVEISKVN 540
Query: 481 RNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHS 540
RNI++ +WEQTNQ G LI+F+D+Q L + IE ++ +GGFDLVIGGSPCNNLAG NR S
Sbjct: 541 RNILKDFWEQTNQTGVLIEFSDIQHLTNDTIEGLMEKYGGFDLVIGGSPCNNLAGGNRVS 600
Query: 541 RDGLEGKESSLFYDYFRILDLVKNMMQRN 569
R GLEG +SSLF++Y RIL++V+ M+R+
Sbjct: 601 RVGLEGDQSSLFFEYCRILEVVRARMRRS 629
>gi|159461702|gb|ABW96890.1| DRM-type DNA-methyltransferase [Elaeis guineensis]
Length = 591
Score = 672 bits (1735), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/541 (61%), Positives = 407/541 (75%), Gaps = 28/541 (5%)
Query: 46 SKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNS 105
S+ L+ F+ MGF DMV KAI+ENGE +T++ILETLLTY A+ ++ +D +
Sbjct: 59 SRPSLVREFIVMGFKEDMVVKAIEENGEGDTEAILETLLTYKAIEKAPSDHDSSPNDCSL 118
Query: 106 PELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERCGPNTSIA 165
P + + SD D F+ EE T +K+ KL+ L MG+ +AS A+ RCGP+ S+
Sbjct: 119 PSDKENTDEDLSDMDGFKDEEFTEDLSEKDRKLLILVEMGFPTDKASSAINRCGPHASLL 178
Query: 166 ELTDFICAAQMAKAADALLAE------------IEDKPR------PKPSNGYHKHKKRRM 207
EL D I AAQMA+ +D L E I D R P+ +N +KR +
Sbjct: 179 ELADSIHAAQMAEESDYHLRESPISGSSEEGTYIYDSQRGRKRRSPEETNC---KRKRWL 235
Query: 208 LDYEKPPIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDT 267
D E I LP PM+GF +P+ I +R +PEAA GPPYFYYENVALAPKG W+T
Sbjct: 236 SDNESM-----IFLPKPMVGFSLPNQRMTIANRKIPEAAIGPPYFYYENVALAPKGAWET 290
Query: 268 ISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPS 327
ISRFLYD+EPEFVDSK+FCAAARKRGYVHNLPI NR L P PP+ I EA P+++KWWPS
Sbjct: 291 ISRFLYDIEPEFVDSKHFCAAARKRGYVHNLPIHNRFPLRPTPPKTIQEAFPMTKKWWPS 350
Query: 328 WDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNK 387
WD+R NCLQTC+ASAKLTERIR LE+ G+P PP +QK+V+DECR+WNLVWVGR+K
Sbjct: 351 WDSRRQFNCLQTCVASAKLTERIRIELEKY-GDP-PPERIQKYVLDECRRWNLVWVGRHK 408
Query: 388 LAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINV 447
+APLEPDE+EMLLGFP++HTRGGGISR +RYKSLGNSFQVDTVAYHLSVLK+M+P+GI V
Sbjct: 409 VAPLEPDEIEMLLGFPRDHTRGGGISRINRYKSLGNSFQVDTVAYHLSVLKDMFPNGITV 468
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
LSLFSGIGGAEVALHRLG+ +K VVSV+IS+VNRNI++SWWEQTNQ G LID DVQ+L+
Sbjct: 469 LSLFSGIGGAEVALHRLGIHLKTVVSVEISDVNRNILKSWWEQTNQTGELIDLFDVQELN 528
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQ 567
+++EQMIN FGGFDLVIGGSPCNNL+GSNR+SRDGLEGK SSLFYDYFRILDLVK +M
Sbjct: 529 GDKLEQMINTFGGFDLVIGGSPCNNLSGSNRYSRDGLEGKHSSLFYDYFRILDLVKCIMG 588
Query: 568 R 568
+
Sbjct: 589 K 589
>gi|30684984|ref|NP_196966.2| DNA (cytosine-5)-methyltransferase DRM2 [Arabidopsis thaliana]
gi|75184795|sp|Q9M548.1|DRM2_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase DRM2; AltName:
Full=Protein DOMAINS REARRANGED METHYLASE 2
gi|7658293|gb|AAF66129.1|AF240695_1 cytosine methyltransferase [Arabidopsis thaliana]
gi|51970418|dbj|BAD43901.1| putative protein [Arabidopsis thaliana]
gi|62319261|dbj|BAD94486.1| putative protein [Arabidopsis thaliana]
gi|110738276|dbj|BAF01067.1| hypothetical protein [Arabidopsis thaliana]
gi|332004673|gb|AED92056.1| DNA (cytosine-5)-methyltransferase DRM2 [Arabidopsis thaliana]
Length = 626
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/569 (58%), Positives = 418/569 (73%), Gaps = 24/569 (4%)
Query: 8 MGFSEEVVAKAIQENGEQ-NTDLILEALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAK 66
MGF E++++AI+E G T +I++ + K+S+ A SSKSK IDHF+ MGF + V K
Sbjct: 71 MGFPVEMISRAIKETGPNVETSVIIDTISKYSSDCEAGSSKSKAIDHFLAMGFDEEKVVK 130
Query: 67 AIQENGEENTDSILETLLTY-SALGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGE 125
AIQE+GE+N ++I LL+ A + E+ D +S + D ++ D + D
Sbjct: 131 AIQEHGEDNMEAIANALLSCPEAKKLPAAVEEEDGIDWSSSDDDTNYTDMLNSDDE---- 186
Query: 126 EITNPDPDKEE---KLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADA 182
DP+ E K+ SL MG+S EAS+A+ERCG N IAELTDF+CAAQMA+
Sbjct: 187 ----KDPNSNENGSKIRSLVKMGFSELEASLAVERCGENVDIAELTDFLCAAQMAREFSE 242
Query: 183 LLAEIED-KPRPKPSNGYHKHKKRRMLDYEKPPI---DEPIRLPNPMIGFGVPSNPDVIV 238
E E+ KPR H KKRR +P DEPIRLPNPMIGFGVP+ P +I
Sbjct: 243 FYTEHEEQKPR-------HNIKKRRFESKGEPRSSVDDEPIRLPNPMIGFGVPNEPGLIT 295
Query: 239 HRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNL 298
HRSLPE A GPP+FYYENVAL PKGVW+TISR L+++ PEFVDSKYFC AARKRGY+HNL
Sbjct: 296 HRSLPELARGPPFFYYENVALTPKGVWETISRHLFEIPPEFVDSKYFCVAARKRGYIHNL 355
Query: 299 PIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECD 358
PI NR + P P I++A PLS++WWP WD R+ LNC+ TC SA+LT RIR ALE +
Sbjct: 356 PINNRFQIQPPPKYTIHDAFPLSKRWWPEWDKRTKLNCILTCTGSAQLTNRIRVALEPYN 415
Query: 359 GEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRY 418
EPEPP HVQ++V+D+C+KWNLVWVG+NK APLEPDE+E +LGFPKNHTRGGG+SRT+R+
Sbjct: 416 EEPEPPKHVQRYVIDQCKKWNLVWVGKNKAAPLEPDEMESILGFPKNHTRGGGMSRTERF 475
Query: 419 KSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE 478
KSLGNSFQVDTVAYHLSVLK ++P GINVLSLF+GIGG EVALHRL ++MK VVSV+IS+
Sbjct: 476 KSLGNSFQVDTVAYHLSVLKPIFPHGINVLSLFTGIGGGEVALHRLQIKMKLVVSVEISK 535
Query: 479 VNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNR 538
VNRNI++ +WEQTNQ G LI+F+D+Q L + IE ++ +GGFDLVIGGSPCNNLAG NR
Sbjct: 536 VNRNILKDFWEQTNQTGELIEFSDIQHLTNDTIEGLMEKYGGFDLVIGGSPCNNLAGGNR 595
Query: 539 HSRDGLEGKESSLFYDYFRILDLVKNMMQ 567
SR GLEG +SSLF++Y RIL++V+ M+
Sbjct: 596 VSRVGLEGDQSSLFFEYCRILEVVRARMR 624
>gi|42567866|ref|NP_197042.2| DNA (cytosine-5)-methyltransferase DRM1 [Arabidopsis thaliana]
gi|257096638|sp|Q9LXE5.2|DRM1_ARATH RecName: Full=DNA (cytosine-5)-methyltransferase DRM1; AltName:
Full=Protein DOMAINS REARRANGED METHYLASE 1
gi|332004771|gb|AED92154.1| DNA (cytosine-5)-methyltransferase DRM1 [Arabidopsis thaliana]
Length = 624
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/565 (57%), Positives = 417/565 (73%), Gaps = 20/565 (3%)
Query: 5 FVGMGFSEEVVAKAIQENGEQNTD--LILEALLKHSASSSASSSKSKLIDHFVGMGFSVD 62
FV MGFS +++A+AI+E N + +ILE L +SAS+ ASSSKSK+I+HF+ MGF +
Sbjct: 66 FVEMGFSTQMIARAIEETAGANMEPMMILETLFNYSASTEASSSKSKVINHFIAMGFPEE 125
Query: 63 MVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSF 122
V KA+QE+G+E+ I LLTY+ + + ++E D N D + +S +
Sbjct: 126 HVIKAMQEHGDEDVGEITNALLTYAEVDKLRESE-----DMNININDDDDDNLYSLSSDD 180
Query: 123 EGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADA 182
E +E+ N +++ L +L MGY ++A+IA+ERCG + S+ E+ DFICAAQMA+ D
Sbjct: 181 EEDELNNSS-NEDRILQALIKMGYLREDAAIAIERCGEDASMEEVVDFICAAQMARQFDE 239
Query: 183 LLAEIEDKPRPKPSNGYHKHKKRRMLDY--EKPPIDEPIRLPNPMIGFGVPSNPDVIVHR 240
+ AE P + +KKRR KP D+ I LP MIGFGVP++P +++HR
Sbjct: 240 IYAE------PDKKELMNNNKKRRTYTETPRKPNTDQLISLPKEMIGFGVPNHPGLMMHR 293
Query: 241 S--LPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNL 298
+P+ A GPP+FYYENVA+ PKGVW IS LYD+ PEFVDSK+FCAAARKRGY+HNL
Sbjct: 294 PVPIPDIARGPPFFYYENVAMTPKGVWAKISSHLYDIVPEFVDSKHFCAAARKRGYIHNL 353
Query: 299 PIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECD 358
PI+NR + P I EA PL+++WWPSWD R+ LNCL TCIAS++LTE+IR+ALE D
Sbjct: 354 PIQNRFQIQPPQHNTIQEAFPLTKRWWPSWDGRTKLNCLLTCIASSRLTEKIREALERYD 413
Query: 359 GEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRY 418
GE P VQK+VM EC+KWNLVWVG+NKLAPL+ DE+E LLGFP++HTRGGGIS TDRY
Sbjct: 414 GET--PLDVQKWVMYECKKWNLVWVGKNKLAPLDADEMEKLLGFPRDHTRGGGISTTDRY 471
Query: 419 KSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE 478
KSLGNSFQVDTVAYHLSVLK ++P+GINVLSLF+GIGG EVALHRL ++M VVSV+IS+
Sbjct: 472 KSLGNSFQVDTVAYHLSVLKPLFPNGINVLSLFTGIGGGEVALHRLQIKMNVVVSVEISD 531
Query: 479 VNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNR 538
NRNI+RS+WEQTNQKG L +F DVQ+LD N IE++++ +GGFDLVIGGSPCNNLAG NR
Sbjct: 532 ANRNILRSFWEQTNQKGILREFKDVQKLDDNTIERLMDEYGGFDLVIGGSPCNNLAGGNR 591
Query: 539 HSRDGLEGKESSLFYDYFRILDLVK 563
H R GL G+ SSLF+DY RIL+ V+
Sbjct: 592 HHRVGLGGEHSSLFFDYCRILEAVR 616
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 46/222 (20%)
Query: 1 MIDHFVGMGFSEEVVAKAIQENGEQNTDLILEALLK------------------------ 36
+I+HF+ MGF EE V KA+QE+G+++ I ALL
Sbjct: 113 VINHFIAMGFPEEHVIKAMQEHGDEDVGEITNALLTYAEVDKLRESEDMNININDDDDDN 172
Query: 37 -HSASS-------SASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSA 88
+S SS + SS++ +++ + MG+ + A AI+ GE D+ +E ++ +
Sbjct: 173 LYSLSSDDEEDELNNSSNEDRILQALIKMGYLREDAAIAIERCGE---DASMEEVVDFIC 229
Query: 89 LGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLAS--MGY 146
Q ++ I ++ + EL + + T++ P ++L+SL +G+
Sbjct: 230 AAQMARQFDEIYAEPDKKELMNNNKKRRTYTET--------PRKPNTDQLISLPKEMIGF 281
Query: 147 SV-QEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEI 187
V + M R P IA F +A + A+I
Sbjct: 282 GVPNHPGLMMHRPVPIPDIARGPPFFYYENVAMTPKGVWAKI 323
>gi|212720705|ref|NP_001131171.1| uncharacterized protein LOC100192479 [Zea mays]
gi|194690774|gb|ACF79471.1| unknown [Zea mays]
gi|414864327|tpg|DAA42884.1| TPA: DNA cytosine methyltransferase Zmet3 [Zea mays]
Length = 609
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 311/553 (56%), Positives = 384/553 (69%), Gaps = 39/553 (7%)
Query: 48 SKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQ---------SSQAEQH 98
+ L+ ++ MGF+ ++V KA+++NG+ DS++E LLTY LG S A Q
Sbjct: 63 ASLVQKYMDMGFTEEIVRKAMKDNGDNGADSLVELLLTYQELGNDLKVDNGFASGCAPQT 122
Query: 99 INSDQNSPEL---DGSFLDGFSDT------DSFEGEEITNPDPDKEEKLVSLASMGYSVQ 149
++ + L D DG T D E E+ N K++K+ SL MG+
Sbjct: 123 VDDSDDDDILENWDDEDADGGRSTRVANSIDDSEDEDFLNEMSQKDKKVDSLVKMGFPED 182
Query: 150 EASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIED--------KPRPKPSNGYHK 201
EA++A+ RCG + SI+ L D I A+Q A D + D + + + +G K
Sbjct: 183 EAALAITRCGQDASISVLVDSIYASQTA--GDGYCGNLSDYEGNSNGGRNKGRFMDGNKK 240
Query: 202 HKKRR--MLDYEKPPID----EPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYE 255
+KR + P+D EP+ LPNPM+GF +P + V RSLP A GPPYFYYE
Sbjct: 241 KRKRYGGQAQGNRGPLDGSCEEPMPLPNPMVGFNLPDHWTRPVDRSLPTQAIGPPYFYYE 300
Query: 256 NVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIY 315
NVALAPKGVW TISRFLYD++PEFVDSKYFCAAARKRGY+HNLP++ R L+PLPP+ I+
Sbjct: 301 NVALAPKGVWTTISRFLYDIQPEFVDSKYFCAAARKRGYIHNLPLERRSPLLPLPPKTIF 360
Query: 316 EALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDEC 375
EA P +++WWPSWD R NCLQTC +SAKL ERIR L + PP VQKFV++EC
Sbjct: 361 EAFPRTKRWWPSWDPRRQFNCLQTCTSSAKLLERIRVTL--ANSSDPPPPLVQKFVLEEC 418
Query: 376 RKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLS 435
RKWNL WVG NK+APLEPDE+E LLGFPK+HTR GISRT+RY+SLGNSFQVDTVAYHLS
Sbjct: 419 RKWNLAWVGLNKVAPLEPDEMEFLLGFPKDHTR--GISRTERYRSLGNSFQVDTVAYHLS 476
Query: 436 VLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKG 495
VLK+ YP G+NVLSLF+GIGGAEVALHRLG+RM VVSV+ SEVNR I++SWW+QT Q G
Sbjct: 477 VLKDRYPQGMNVLSLFTGIGGAEVALHRLGIRMNTVVSVEKSEVNRTILKSWWDQT-QTG 535
Query: 496 TLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDY 555
TLI+ DVQ L A+RIE I GGFDLVIGGSPCNNLAGSNRH RDGLEG+ SSLFY Y
Sbjct: 536 TLIEINDVQTLTADRIEAYIRRIGGFDLVIGGSPCNNLAGSNRHHRDGLEGEHSSLFYHY 595
Query: 556 FRILDLVKNMMQR 568
FRILD VK++M+R
Sbjct: 596 FRILDSVKSIMER 608
>gi|162463668|ref|NP_001104977.1| uncharacterized protein LOC541826 [Zea mays]
gi|7716575|gb|AAF68437.1| putative DNA cytosine methyltransferase Zmet3 [Zea mays]
Length = 603
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 303/548 (55%), Positives = 381/548 (69%), Gaps = 35/548 (6%)
Query: 48 SKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINS------ 101
+ L+ +V MGFS ++V KA+++NG+ DS++E LLTY LG + + S
Sbjct: 63 ASLVQKYVDMGFSEEIVLKAMKDNGDNGADSLVELLLTYQELGNDLKVDNDFASSCAPKT 122
Query: 102 --------------DQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYS 147
D+++ + D+D E+ + K+EK+ SL MG+
Sbjct: 123 ADDSDDDDTLEIWDDEDAGGRSTRVANSVDDSDD---EDFLHEMSRKDEKVDSLVKMGFP 179
Query: 148 VQEASIAMERCGPNTSIAELTDFICAAQMA-KAADALLAEIEDKPRPKPSNGYHKHKKRR 206
EA++A+ RCGP+ SI+ L D I A+Q A L++ ED S G K +KR
Sbjct: 180 EDEAALAITRCGPDASISVLVDSIYASQTAGDGYCGNLSDYEDNSYGGRSTGNKKKRKRY 239
Query: 207 --MLDYEKPPID----EPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALA 260
+ P+D EP+ LP+PM+GF +P V RSLP A GPPYFYYENVALA
Sbjct: 240 GGQAQGSRGPLDGSCDEPMPLPHPMVGFNLPDQWSRRVDRSLPAQAIGPPYFYYENVALA 299
Query: 261 PKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPL 320
PKGVW TISRFLYD++PEFVDSKYFCAAARKRGY+HNLP++NR L+P+PP+ I EA P
Sbjct: 300 PKGVWTTISRFLYDIQPEFVDSKYFCAAARKRGYIHNLPLENRSPLLPIPPKTISEAFPR 359
Query: 321 SRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNL 380
+++WWPSWD R NCLQTC++SAKL ERIR AL + PP VQK+V++ECRKWNL
Sbjct: 360 TKRWWPSWDPRRQFNCLQTCVSSAKLLERIRVAL--TNSSDPPPPRVQKYVLEECRKWNL 417
Query: 381 VWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEM 440
WVG NK+APLEPDE+E LLGFPK+HTR GISRT+RY+SLGNSFQVDTVAYHLSVLK++
Sbjct: 418 AWVGLNKVAPLEPDEMEFLLGFPKDHTR--GISRTERYRSLGNSFQVDTVAYHLSVLKDL 475
Query: 441 YPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
+P G+NVLSLFSGIGGAEVALHRLG+RM V+SV+ SEVNR I++SWW+QT Q GTLI+
Sbjct: 476 FPQGMNVLSLFSGIGGAEVALHRLGIRMNTVISVEKSEVNRTILKSWWDQT-QTGTLIEI 534
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
DVQ L + RIE I GGFDLVIGGSPCNNL GSNRH RDGLEG+ S+LF+ YFRIL
Sbjct: 535 TDVQTLSSERIEAYIRRIGGFDLVIGGSPCNNLTGSNRHHRDGLEGEHSALFHHYFRILH 594
Query: 561 LVKNMMQR 568
VK++M+R
Sbjct: 595 AVKSIMER 602
>gi|223945129|gb|ACN26648.1| unknown [Zea mays]
gi|413957185|gb|AFW89834.1| putative DNA cytosine methyltransferase Zmet3 isoform 1 [Zea mays]
gi|413957186|gb|AFW89835.1| putative DNA cytosine methyltransferase Zmet3 isoform 2 [Zea mays]
gi|413957187|gb|AFW89836.1| putative DNA cytosine methyltransferase Zmet3 isoform 3 [Zea mays]
Length = 603
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 302/548 (55%), Positives = 381/548 (69%), Gaps = 35/548 (6%)
Query: 48 SKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINS------ 101
+ L+ +V MGFS ++V KA+++NG+ DS++E LLTY LG + + S
Sbjct: 63 ASLVQKYVDMGFSEEIVLKAMKDNGDNGADSLVELLLTYQELGNDLKVDNDFASSCAPKT 122
Query: 102 --------------DQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYS 147
D+++ + D+D E+ + K+EK+ SL MG+
Sbjct: 123 ADDSDDDDTLEIWDDEDAGGRSTRVANSVDDSDD---EDFLHEMSRKDEKVDSLVKMGFP 179
Query: 148 VQEASIAMERCGPNTSIAELTDFICAAQMA-KAADALLAEIEDKPRPKPSNGYHKHKKRR 206
EA++A+ RCGP+ SI+ L D I A+Q A L++ ED S G K +KR
Sbjct: 180 EDEAALAITRCGPDASISVLVDSIYASQTAGDGYCGNLSDYEDNSYGGRSTGNKKKRKRY 239
Query: 207 --MLDYEKPPID----EPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALA 260
+ P+D EP+ LP+PM+GF +P V RSLP A GPPYFYYENVALA
Sbjct: 240 GGQAQGSRGPLDGSCDEPMPLPHPMVGFNLPDQWSRRVDRSLPAQAIGPPYFYYENVALA 299
Query: 261 PKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPL 320
PKGVW TISRFLYD++PEFVDSKYFCAAARKRGY+HNLP++NR L+P+PP+ I EA P
Sbjct: 300 PKGVWTTISRFLYDIQPEFVDSKYFCAAARKRGYIHNLPLENRSPLLPIPPKTISEAFPR 359
Query: 321 SRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNL 380
+++WWPSWD R NCLQTC++SAKL ERIR AL + PP VQK+V++ECRKWNL
Sbjct: 360 TKRWWPSWDPRRQFNCLQTCVSSAKLLERIRVAL--TNSSDPPPPRVQKYVLEECRKWNL 417
Query: 381 VWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEM 440
WVG NK+APLEPDE+E LLGFPK+HTR GISRT+RY+SLGNSFQVDTVAYHLSVLK++
Sbjct: 418 AWVGLNKVAPLEPDEMEFLLGFPKDHTR--GISRTERYRSLGNSFQVDTVAYHLSVLKDL 475
Query: 441 YPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
+P G+NVLSLFSGIGGAEVALHRLG++M V+SV+ SEVNR I++SWW+QT Q GTLI+
Sbjct: 476 FPQGMNVLSLFSGIGGAEVALHRLGIQMNTVISVEKSEVNRTILKSWWDQT-QTGTLIEI 534
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
DVQ L + RIE I GGFDLVIGGSPCNNL GSNRH RDGLEG+ S+LF+ YFRIL
Sbjct: 535 TDVQTLSSERIEAYIRRIGGFDLVIGGSPCNNLTGSNRHHRDGLEGEHSALFHHYFRILH 594
Query: 561 LVKNMMQR 568
VK++M+R
Sbjct: 595 AVKSIMER 602
>gi|413957188|gb|AFW89837.1| hypothetical protein ZEAMMB73_474031 [Zea mays]
Length = 602
Score = 595 bits (1535), Expect = e-167, Method: Compositional matrix adjust.
Identities = 302/548 (55%), Positives = 381/548 (69%), Gaps = 35/548 (6%)
Query: 48 SKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINS------ 101
+ L+ +V MGFS ++V KA+++NG+ DS++E LLTY LG + + S
Sbjct: 62 ASLVQKYVDMGFSEEIVLKAMKDNGDNGADSLVELLLTYQELGNDLKVDNDFASSCAPKT 121
Query: 102 --------------DQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYS 147
D+++ + D+D E+ + K+EK+ SL MG+
Sbjct: 122 ADDSDDDDTLEIWDDEDAGGRSTRVANSVDDSDD---EDFLHEMSRKDEKVDSLVKMGFP 178
Query: 148 VQEASIAMERCGPNTSIAELTDFICAAQMA-KAADALLAEIEDKPRPKPSNGYHKHKKRR 206
EA++A+ RCGP+ SI+ L D I A+Q A L++ ED S G K +KR
Sbjct: 179 EDEAALAITRCGPDASISVLVDSIYASQTAGDGYCGNLSDYEDNSYGGRSTGNKKKRKRY 238
Query: 207 --MLDYEKPPID----EPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALA 260
+ P+D EP+ LP+PM+GF +P V RSLP A GPPYFYYENVALA
Sbjct: 239 GGQAQGSRGPLDGSCDEPMPLPHPMVGFNLPDQWSRRVDRSLPAQAIGPPYFYYENVALA 298
Query: 261 PKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPL 320
PKGVW TISRFLYD++PEFVDSKYFCAAARKRGY+HNLP++NR L+P+PP+ I EA P
Sbjct: 299 PKGVWTTISRFLYDIQPEFVDSKYFCAAARKRGYIHNLPLENRSPLLPIPPKTISEAFPR 358
Query: 321 SRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNL 380
+++WWPSWD R NCLQTC++SAKL ERIR AL + PP VQK+V++ECRKWNL
Sbjct: 359 TKRWWPSWDPRRQFNCLQTCVSSAKLLERIRVAL--TNSSDPPPPRVQKYVLEECRKWNL 416
Query: 381 VWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEM 440
WVG NK+APLEPDE+E LLGFPK+HTR GISRT+RY+SLGNSFQVDTVAYHLSVLK++
Sbjct: 417 AWVGLNKVAPLEPDEMEFLLGFPKDHTR--GISRTERYRSLGNSFQVDTVAYHLSVLKDL 474
Query: 441 YPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
+P G+NVLSLFSGIGGAEVALHRLG++M V+SV+ SEVNR I++SWW+QT Q GTLI+
Sbjct: 475 FPQGMNVLSLFSGIGGAEVALHRLGIQMNTVISVEKSEVNRTILKSWWDQT-QTGTLIEI 533
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
DVQ L + RIE I GGFDLVIGGSPCNNL GSNRH RDGLEG+ S+LF+ YFRIL
Sbjct: 534 TDVQTLSSERIEAYIRRIGGFDLVIGGSPCNNLTGSNRHHRDGLEGEHSALFHHYFRILH 593
Query: 561 LVKNMMQR 568
VK++M+R
Sbjct: 594 AVKSIMER 601
>gi|108705796|gb|ABF93591.1| DNA cytosine methyltransferase Zmet3, putative, expressed [Oryza
sativa Japonica Group]
gi|283379278|dbj|BAI66065.1| DNA methyltransferase [Oryza sativa Japonica Group]
Length = 598
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 317/571 (55%), Positives = 400/571 (70%), Gaps = 55/571 (9%)
Query: 35 LKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALG---- 90
L A+ A+ S + L+ F+GMGF +M+ KAI+E G+ +T+ +LE LLTY A+G
Sbjct: 41 LPQDANGKANGSGA-LVAEFMGMGFPKEMILKAIKEIGDTDTEQLLELLLTYQAIGGDAS 99
Query: 91 -----QSSQAEQHINSDQ-----NSPELDGS-------FLDGFSDTDSFEGEEITNPDPD 133
S+ A Q + D+ N E D + DG D D F+ E++ +
Sbjct: 100 VGNCSASACAPQTLEVDEEEDDTNWDEYDTAGNCDRTPHSDGSGDEDFFQ--EMS----E 153
Query: 134 KEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMA-KAADALLAEIEDKPR 192
K+EK+ SL +MG+ EA +A++RCG + +A L D I A+Q A A L++ ED
Sbjct: 154 KDEKMKSLVNMGFPEDEAKMAIDRCGLDAPVAVLVDSIYASQEAGNGYSANLSDYEDTE- 212
Query: 193 PKPSNGYHKHKKRRMLDYEKP-------------PID----EPIRLPNPMIGFGVPSNPD 235
+ + KK R +D K P D EP+ LPNPM+GF +P+
Sbjct: 213 ---FSSFGGRKKTRFVDGSKKRKRYGSGPSGNQVPFDGSHEEPMPLPNPMVGFSLPNERL 269
Query: 236 VIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYV 295
VHR+LP+ A GPP+FYYENVALAPKGVW TISRFLYD++PEFVDSKYFCAAARKRGY+
Sbjct: 270 RSVHRNLPDQALGPPFFYYENVALAPKGVWTTISRFLYDIQPEFVDSKYFCAAARKRGYI 329
Query: 296 HNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALE 355
HNLPI+NR ++P+PP+ I EA P +++WWPSWD R NCLQTC+ASAKLTERIR AL
Sbjct: 330 HNLPIENRSPVLPMPPKTISEAFPNTKRWWPSWDPRRQFNCLQTCMASAKLTERIRCALG 389
Query: 356 ECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRT 415
P P VQK+V+DECRKWNLVWVG+NK+APLEPDE+E LLG+P+NHTR G+SRT
Sbjct: 390 RFSDVPTP--QVQKYVLDECRKWNLVWVGKNKVAPLEPDEMEFLLGYPRNHTR--GVSRT 445
Query: 416 DRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVD 475
+RY++LGNSFQVDTVAYHLSVL++++P+G+NVLSLFSGIGGAEVALHRLG+ MK V+SV+
Sbjct: 446 ERYRALGNSFQVDTVAYHLSVLRDLFPNGMNVLSLFSGIGGAEVALHRLGIHMKTVISVE 505
Query: 476 ISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAG 535
SEVNR I++SWW+QT Q GTLI+ ADV+ L RIE I FGGFDLVIGGSPCNNLAG
Sbjct: 506 KSEVNRTILKSWWDQT-QTGTLIEIADVRHLTTERIETFIRRFGGFDLVIGGSPCNNLAG 564
Query: 536 SNRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
SNRH RDGLEG+ S+LFYDY RIL+ VK M
Sbjct: 565 SNRHHRDGLEGEHSALFYDYIRILEHVKATM 595
>gi|195655665|gb|ACG47300.1| DNA cytosine methyltransferase Zmet3 [Zea mays]
Length = 609
Score = 595 bits (1534), Expect = e-167, Method: Compositional matrix adjust.
Identities = 309/553 (55%), Positives = 384/553 (69%), Gaps = 39/553 (7%)
Query: 48 SKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQ---------SSQAEQH 98
+ L+ ++ MGF+ ++V KA+++NG+ DS++E LLTY LG S A Q
Sbjct: 63 ASLVQKYMDMGFTEEIVRKAMKDNGDNGADSLVELLLTYQELGNDLKVDNGFASGCAPQT 122
Query: 99 INSDQNSPEL---DGSFLDGFSDT------DSFEGEEITNPDPDKEEKLVSLASMGYSVQ 149
++ + L D DG T D E E+ N K++K+ SL MG+
Sbjct: 123 VDDSDDDDILENWDDEDADGGRSTRVANSIDDSEDEDFLNEMSQKDKKVDSLVKMGFPED 182
Query: 150 EASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIED--------KPRPKPSNGYHK 201
EA++A+ RCG + SI+ L D I A+Q A D + D + + + +G K
Sbjct: 183 EAALAITRCGQDASISVLVDSIYASQTA--GDGYCGNLSDYEGNSNGGRNKGRFMDGNKK 240
Query: 202 HKKRR--MLDYEKPPID----EPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYE 255
+KR + P+D EP+ LPNPM+GF +P + V RSLP A GPPYFYYE
Sbjct: 241 KRKRYGGQAQGNRGPLDGSCEEPMPLPNPMVGFNLPDHWTRPVDRSLPTQAIGPPYFYYE 300
Query: 256 NVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIY 315
NVALAPKGVW TISRFLYD++PEFVDSKYFCAAARKRGY+HNLP++ R L+P+PP+ I+
Sbjct: 301 NVALAPKGVWTTISRFLYDIQPEFVDSKYFCAAARKRGYIHNLPLERRSPLLPIPPKTIF 360
Query: 316 EALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDEC 375
EA P +++WWPSWD R NCLQTC +SAKL ERIR L + PP VQKFV++EC
Sbjct: 361 EAFPRTKRWWPSWDPRRQFNCLQTCTSSAKLLERIRVTL--ANSSDPPPPLVQKFVLEEC 418
Query: 376 RKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLS 435
RKWNL WVG NK+APLEPDE+E LLGFPK+HTR GISRT+RY+SLGNSFQVDTVAYHLS
Sbjct: 419 RKWNLAWVGLNKVAPLEPDEMEFLLGFPKDHTR--GISRTERYRSLGNSFQVDTVAYHLS 476
Query: 436 VLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKG 495
VLK+ YP G+NVLSLF+GIGGAEVALHRLG+RM V+SV+ SEVNR I++SWW+QT Q G
Sbjct: 477 VLKDRYPQGMNVLSLFTGIGGAEVALHRLGIRMNTVISVEKSEVNRTILKSWWDQT-QIG 535
Query: 496 TLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDY 555
TLI+ DVQ L A+RIE I GGFDLVIGGSPCNNLAGSNRH RDGLEG+ SSLFY Y
Sbjct: 536 TLIEINDVQTLTADRIEAYIRRIGGFDLVIGGSPCNNLAGSNRHHRDGLEGEHSSLFYHY 595
Query: 556 FRILDLVKNMMQR 568
FRILD VK++M+R
Sbjct: 596 FRILDSVKSIMER 608
>gi|218191946|gb|EEC74373.1| hypothetical protein OsI_09692 [Oryza sativa Indica Group]
Length = 921
Score = 595 bits (1533), Expect = e-167, Method: Compositional matrix adjust.
Identities = 315/565 (55%), Positives = 398/565 (70%), Gaps = 55/565 (9%)
Query: 35 LKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALG---- 90
L A+ A+ S + L+ F+GMGF +M+ KAI+E G+ +T+ +LE LLTY A+G
Sbjct: 121 LPQDANGKANGSGA-LVAEFMGMGFPKEMILKAIKEIGDTDTEQLLELLLTYQAIGGDAS 179
Query: 91 -----QSSQAEQHINSDQ-----NSPELDGS-------FLDGFSDTDSFEGEEITNPDPD 133
S+ A Q + D+ N E D + DG D D F+ E++ +
Sbjct: 180 VGNCSASACAPQTLEVDEEEDDTNWDEYDTAGNCDRTPHSDGSGDEDFFQ--EMS----E 233
Query: 134 KEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMA-KAADALLAEIEDKPR 192
K+EK+ SL +MG+ EA +A++RCG + +A L D I A+Q A A L++ ED
Sbjct: 234 KDEKMKSLVNMGFPEDEAKMAIDRCGLDAPVAVLVDSIYASQEAGNGYSANLSDYEDTE- 292
Query: 193 PKPSNGYHKHKKRRMLDYEKP-------------PID----EPIRLPNPMIGFGVPSNPD 235
+ + KK R +D K P D EP+ LPNPM+GF +P+
Sbjct: 293 ---FSSFGGRKKTRFVDGSKKRKRYGSGPSGNQVPFDGSHEEPMPLPNPMVGFSLPNERL 349
Query: 236 VIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYV 295
VHR+LP+ A GPP+FYYENVALAPKGVW TISRFLYD++PEFVDSKYFCAAARKRGY+
Sbjct: 350 RSVHRNLPDQALGPPFFYYENVALAPKGVWTTISRFLYDIQPEFVDSKYFCAAARKRGYI 409
Query: 296 HNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALE 355
HNLPI+NR ++P+PP+ I EA P +++WWPSWD R NCLQTC+ASAKLTERIR AL
Sbjct: 410 HNLPIENRSPVLPMPPKTISEAFPNTKRWWPSWDPRRQFNCLQTCMASAKLTERIRCALG 469
Query: 356 ECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRT 415
P P VQK+V+DECRKWNLVWVG+NK+APLEPDE+E LLG+P+NHTR G+SRT
Sbjct: 470 RFSDVPTP--QVQKYVLDECRKWNLVWVGKNKVAPLEPDEMEFLLGYPRNHTR--GVSRT 525
Query: 416 DRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVD 475
+RY++LGNSFQVDTVAYHLSVL++++P+G+NVLSLFSGIGGAEVALHRLG+RMK V+SV+
Sbjct: 526 ERYRALGNSFQVDTVAYHLSVLRDLFPNGMNVLSLFSGIGGAEVALHRLGIRMKTVISVE 585
Query: 476 ISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAG 535
SEVNR I++SWW+QT Q GTLI+ ADV+ L RIE I FGGFDLVIGGSPCNNLAG
Sbjct: 586 KSEVNRTILKSWWDQT-QTGTLIEIADVRHLTTERIETFIRRFGGFDLVIGGSPCNNLAG 644
Query: 536 SNRHSRDGLEGKESSLFYDYFRILD 560
SNRH RDGLEG+ S+LFYDY RIL+
Sbjct: 645 SNRHHRDGLEGEHSALFYDYIRILE 669
>gi|222624058|gb|EEE58190.1| hypothetical protein OsJ_09131 [Oryza sativa Japonica Group]
Length = 918
Score = 592 bits (1527), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/565 (55%), Positives = 397/565 (70%), Gaps = 55/565 (9%)
Query: 35 LKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALG---- 90
L A+ A+ S + L+ F+GMGF +M+ KAI+E G+ +T+ +LE LLTY A+G
Sbjct: 118 LPQDANGKANGSGA-LVAEFMGMGFPKEMILKAIKEIGDTDTEQLLELLLTYQAIGGDAS 176
Query: 91 -----QSSQAEQHINSDQ-----NSPELDGS-------FLDGFSDTDSFEGEEITNPDPD 133
S+ A Q + D+ N E D + DG D D F+ E++ +
Sbjct: 177 VGNCSASACAPQTLEVDEEEDDTNWDEYDTAGNCDRTPHSDGSGDEDFFQ--EMS----E 230
Query: 134 KEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMA-KAADALLAEIEDKPR 192
K+EK+ SL +MG+ EA +A++RCG + +A L D I A+Q A A L++ ED
Sbjct: 231 KDEKMKSLVNMGFPEDEAKMAIDRCGLDAPVAVLVDSIYASQEAGNGYSANLSDYEDTE- 289
Query: 193 PKPSNGYHKHKKRRMLDYEKP-------------PID----EPIRLPNPMIGFGVPSNPD 235
+ + KK R +D K P D EP+ LPNPM+GF +P+
Sbjct: 290 ---FSSFGGRKKTRFVDGSKKRKRYGSGPSGNQVPFDGSHEEPMPLPNPMVGFSLPNERL 346
Query: 236 VIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYV 295
VHR+LP+ A GPP+FYYENVALAPKGVW TISRFLYD++PEFVDSKYFCAAARKRGY+
Sbjct: 347 RSVHRNLPDQALGPPFFYYENVALAPKGVWTTISRFLYDIQPEFVDSKYFCAAARKRGYI 406
Query: 296 HNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALE 355
HNLPI+NR ++P+PP+ I EA P +++WWPSWD R NCLQTC+ASAKLTERIR AL
Sbjct: 407 HNLPIENRSPVLPMPPKTISEAFPNTKRWWPSWDPRRQFNCLQTCMASAKLTERIRCALG 466
Query: 356 ECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRT 415
P P VQK+V+DECRKWNLVWVG+NK+APLEPDE+E LLG+P+NHTR G+SRT
Sbjct: 467 RFSDVPTP--QVQKYVLDECRKWNLVWVGKNKVAPLEPDEMEFLLGYPRNHTR--GVSRT 522
Query: 416 DRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVD 475
+RY++LGNSFQVDTVAYHLSVL++++P+G+NVLSLFSGIGGAEVALHRLG+ MK V+SV+
Sbjct: 523 ERYRALGNSFQVDTVAYHLSVLRDLFPNGMNVLSLFSGIGGAEVALHRLGIHMKTVISVE 582
Query: 476 ISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAG 535
SEVNR I++SWW+QT Q GTLI+ ADV+ L RIE I FGGFDLVIGGSPCNNLAG
Sbjct: 583 KSEVNRTILKSWWDQT-QTGTLIEIADVRHLTTERIETFIRRFGGFDLVIGGSPCNNLAG 641
Query: 536 SNRHSRDGLEGKESSLFYDYFRILD 560
SNRH RDGLEG+ S+LFYDY RIL+
Sbjct: 642 SNRHHRDGLEGEHSALFYDYIRILE 666
>gi|224060119|ref|XP_002300046.1| DNA methyltransferase [Populus trichocarpa]
gi|222847304|gb|EEE84851.1| DNA methyltransferase [Populus trichocarpa]
Length = 344
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 273/344 (79%), Positives = 306/344 (88%), Gaps = 2/344 (0%)
Query: 225 MIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKY 284
M+GFGVP+ P ++ R+L EAA GPP+FYYENVALAPKGVW TISRFLYDVEPEFVDSK+
Sbjct: 1 MVGFGVPTEPGIVTRRTLSEAAIGPPFFYYENVALAPKGVWQTISRFLYDVEPEFVDSKH 60
Query: 285 FCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASA 344
FCAAARKRGYVHNLPI NR L+PLPP I+EALPL+RKWWP+WD R+ LNCLQTCIASA
Sbjct: 61 FCAAARKRGYVHNLPIHNRFPLLPLPPNTIHEALPLTRKWWPAWDERTKLNCLQTCIASA 120
Query: 345 KLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPK 404
KLTERIRKALE +GEP P HVQKF+MDECRKWNLVWVGRNK+APLE DEVEMLLGFP+
Sbjct: 121 KLTERIRKALEAYEGEP--PLHVQKFIMDECRKWNLVWVGRNKVAPLEADEVEMLLGFPR 178
Query: 405 NHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRL 464
NHTRGGGISRTDRYKSLGNSFQVDTVAYHLS LK+++P GINVLSLFSGIGGAEVALHRL
Sbjct: 179 NHTRGGGISRTDRYKSLGNSFQVDTVAYHLSSLKDLFPGGINVLSLFSGIGGAEVALHRL 238
Query: 465 GVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLV 524
G+R+KNVVSV+IS VNR+I+ WWEQTNQ G LI DVQ L A+R+EQ++N +G FDLV
Sbjct: 239 GIRLKNVVSVEISNVNRSIMSCWWEQTNQTGNLIHIEDVQHLTADRLEQLMNMYGSFDLV 298
Query: 525 IGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
+GGSPCNNLAGSNRH RDGLEGKESSLF+DY RILD+VKN+ R
Sbjct: 299 VGGSPCNNLAGSNRHHRDGLEGKESSLFFDYCRILDVVKNLTSR 342
>gi|24431594|gb|AAN61474.1| Putative DNA cytosine methyltransferase Zmet3 [Oryza sativa
Japonica Group]
Length = 881
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 314/565 (55%), Positives = 397/565 (70%), Gaps = 55/565 (9%)
Query: 35 LKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALG---- 90
L A+ A+ S + L+ F+GMGF +M+ KAI+E G+ +T+ +LE LLTY A+G
Sbjct: 246 LPQDANGKANGSGA-LVAEFMGMGFPKEMILKAIKEIGDTDTEQLLELLLTYQAIGGDAS 304
Query: 91 -----QSSQAEQHINSDQ-----NSPELDGS-------FLDGFSDTDSFEGEEITNPDPD 133
S+ A Q + D+ N E D + DG D D F+ E++ +
Sbjct: 305 VGNCSASACAPQTLEVDEEEDDTNWDEYDTAGNCDRTPHSDGSGDEDFFQ--EMS----E 358
Query: 134 KEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMA-KAADALLAEIEDKPR 192
K+EK+ SL +MG+ EA +A++RCG + +A L D I A+Q A A L++ ED
Sbjct: 359 KDEKMKSLVNMGFPEDEAKMAIDRCGLDAPVAVLVDSIYASQEAGNGYSANLSDYEDTE- 417
Query: 193 PKPSNGYHKHKKRRMLDYEKP-------------PID----EPIRLPNPMIGFGVPSNPD 235
+ + KK R +D K P D EP+ LPNPM+GF +P+
Sbjct: 418 ---FSSFGGRKKTRFVDGSKKRKRYGSGPSGNQVPFDGSHEEPMPLPNPMVGFSLPNERL 474
Query: 236 VIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYV 295
VHR+LP+ A GPP+FYYENVALAPKGVW TISRFLYD++PEFVDSKYFCAAARKRGY+
Sbjct: 475 RSVHRNLPDQALGPPFFYYENVALAPKGVWTTISRFLYDIQPEFVDSKYFCAAARKRGYI 534
Query: 296 HNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALE 355
HNLPI+NR ++P+PP+ I EA P +++WWPSWD R NCLQTC+ASAKLTERIR AL
Sbjct: 535 HNLPIENRSPVLPMPPKTISEAFPNTKRWWPSWDPRRQFNCLQTCMASAKLTERIRCALG 594
Query: 356 ECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRT 415
P P VQK+V+DECRKWNLVWVG+NK+APLEPDE+E LLG+P+NHTR G+SRT
Sbjct: 595 RFSDVPTP--QVQKYVLDECRKWNLVWVGKNKVAPLEPDEMEFLLGYPRNHTR--GVSRT 650
Query: 416 DRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVD 475
+RY++LGNSFQVDTVAYHLSVL++++P+G+NVLSLFSGIGGAEVALHRLG+ MK V+SV+
Sbjct: 651 ERYRALGNSFQVDTVAYHLSVLRDLFPNGMNVLSLFSGIGGAEVALHRLGIHMKTVISVE 710
Query: 476 ISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAG 535
SEVNR I++SWW+QT Q GTLI+ ADV+ L RIE I FGGFDLVIGGSPCNNLAG
Sbjct: 711 KSEVNRTILKSWWDQT-QTGTLIEIADVRHLTTERIETFIRRFGGFDLVIGGSPCNNLAG 769
Query: 536 SNRHSRDGLEGKESSLFYDYFRILD 560
SNRH RDGLEG+ S+LFYDY RIL+
Sbjct: 770 SNRHHRDGLEGEHSALFYDYIRILE 794
>gi|115450235|ref|NP_001048718.1| Os03g0110800 [Oryza sativa Japonica Group]
gi|108705795|gb|ABF93590.1| DNA cytosine methyltransferase Zmet3, putative, expressed [Oryza
sativa Japonica Group]
gi|113547189|dbj|BAF10632.1| Os03g0110800 [Oryza sativa Japonica Group]
Length = 597
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/571 (55%), Positives = 399/571 (69%), Gaps = 56/571 (9%)
Query: 35 LKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALG---- 90
L A+ A+ S + L+ F+GMGF +M+ KAI+E G+ +T+ +LE LLTY A+G
Sbjct: 41 LPQDANGKANGSGA-LVAEFMGMGFPKEMILKAIKEIGDTDTEQLLELLLTYQAIGGDAS 99
Query: 91 -----QSSQAEQHINSDQ-----NSPELDGS-------FLDGFSDTDSFEGEEITNPDPD 133
S+ A Q + D+ N E D + DG D D F+ E++ +
Sbjct: 100 VGNCSASACAPQTLEVDEEEDDTNWDEYDTAGNCDRTPHSDGSGDEDFFQ--EMS----E 153
Query: 134 KEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMA-KAADALLAEIEDKPR 192
K+EK+ SL +MG+ EA +A++RC + +A L D I A+Q A A L++ ED
Sbjct: 154 KDEKMKSLVNMGFPEDEAKMAIDRC-LDAPVAVLVDSIYASQEAGNGYSANLSDYEDTE- 211
Query: 193 PKPSNGYHKHKKRRMLDYEKP-------------PID----EPIRLPNPMIGFGVPSNPD 235
+ + KK R +D K P D EP+ LPNPM+GF +P+
Sbjct: 212 ---FSSFGGRKKTRFVDGSKKRKRYGSGPSGNQVPFDGSHEEPMPLPNPMVGFSLPNERL 268
Query: 236 VIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYV 295
VHR+LP+ A GPP+FYYENVALAPKGVW TISRFLYD++PEFVDSKYFCAAARKRGY+
Sbjct: 269 RSVHRNLPDQALGPPFFYYENVALAPKGVWTTISRFLYDIQPEFVDSKYFCAAARKRGYI 328
Query: 296 HNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALE 355
HNLPI+NR ++P+PP+ I EA P +++WWPSWD R NCLQTC+ASAKLTERIR AL
Sbjct: 329 HNLPIENRSPVLPMPPKTISEAFPNTKRWWPSWDPRRQFNCLQTCMASAKLTERIRCALG 388
Query: 356 ECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRT 415
P P VQK+V+DECRKWNLVWVG+NK+APLEPDE+E LLG+P+NHTR G+SRT
Sbjct: 389 RFSDVPTP--QVQKYVLDECRKWNLVWVGKNKVAPLEPDEMEFLLGYPRNHTR--GVSRT 444
Query: 416 DRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVD 475
+RY++LGNSFQVDTVAYHLSVL++++P+G+NVLSLFSGIGGAEVALHRLG+ MK V+SV+
Sbjct: 445 ERYRALGNSFQVDTVAYHLSVLRDLFPNGMNVLSLFSGIGGAEVALHRLGIHMKTVISVE 504
Query: 476 ISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAG 535
SEVNR I++SWW+QT Q GTLI+ ADV+ L RIE I FGGFDLVIGGSPCNNLAG
Sbjct: 505 KSEVNRTILKSWWDQT-QTGTLIEIADVRHLTTERIETFIRRFGGFDLVIGGSPCNNLAG 563
Query: 536 SNRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
SNRH RDGLEG+ S+LFYDY RIL+ VK M
Sbjct: 564 SNRHHRDGLEGEHSALFYDYIRILEHVKATM 594
>gi|242052551|ref|XP_002455421.1| hypothetical protein SORBIDRAFT_03g010500 [Sorghum bicolor]
gi|241927396|gb|EES00541.1| hypothetical protein SORBIDRAFT_03g010500 [Sorghum bicolor]
Length = 608
Score = 585 bits (1507), Expect = e-164, Method: Compositional matrix adjust.
Identities = 304/556 (54%), Positives = 376/556 (67%), Gaps = 46/556 (8%)
Query: 48 SKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSD---QN 104
+ L+ ++ MGF ++V KA+++NG+ DS++E LLTY LG + + S QN
Sbjct: 63 ASLVHKYMDMGFPEEIVLKAMKDNGDNGADSLVELLLTYQELGNDLKVDNGFASGCVPQN 122
Query: 105 -------------SPELDGSFLDGFSDT-DSFEGEEITNPDPDKEEKLVSLASMGYSVQE 150
E G G +++ D E+ + +EK+ SL MG+ E
Sbjct: 123 VDDSDDDDILENWDDEDAGGRSTGVANSVDDSGDEDFLHEMSQTDEKVYSLVKMGFPEDE 182
Query: 151 ASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPSNGYHKHKKRRMLDY 210
A++A+ RCG + SI+ L D I A+Q A D + D N Y K R +D
Sbjct: 183 AALAVTRCGQDASISVLVDSIYASQTA--GDVYCGNLSDYE----DNSYGGRNKGRFMDA 236
Query: 211 EKP--------------PID----EPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYF 252
K P+D EP+ LP+PM+GF +P V RSLP A GPPYF
Sbjct: 237 NKKRRKRYEGQAHGSRGPLDGSSDEPMPLPHPMVGFSLPHQCTRPVDRSLPSQAMGPPYF 296
Query: 253 YYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQ 312
YYENVALAPKGVW TISRFLYD++PEFVDSKYFCAAARKRGY+HNLP++NR L+P+PP+
Sbjct: 297 YYENVALAPKGVWTTISRFLYDIQPEFVDSKYFCAAARKRGYIHNLPLENRSPLLPIPPK 356
Query: 313 NIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVM 372
I EA P +++WWPSWD R NCLQTC++SAKL ERIR AL + PP VQKFV+
Sbjct: 357 KISEAFPHTKRWWPSWDPRRQFNCLQTCVSSAKLLERIRVAL--TNSSDPPPPRVQKFVL 414
Query: 373 DECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAY 432
+ECRKWNL WVG NK+APLEPDE+E LLGFPK+HTR GISR +RY+SLGNSFQVDTVAY
Sbjct: 415 EECRKWNLAWVGLNKVAPLEPDEMEFLLGFPKDHTR--GISRRERYRSLGNSFQVDTVAY 472
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTN 492
HLSVLK+MYP G+NVLSLFSGIGGAEVALHRLG+RMK V+SV+ SEVNR I++SWW+QT
Sbjct: 473 HLSVLKDMYPQGMNVLSLFSGIGGAEVALHRLGIRMKTVISVEKSEVNRTILKSWWDQT- 531
Query: 493 QKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLF 552
Q G LI+ DVQ L + RIE + GGFDLVIGGSPCNNL GSNR+ RDGLEG+ SSLF
Sbjct: 532 QTGLLIEICDVQTLTSERIEAYVRRIGGFDLVIGGSPCNNLTGSNRYHRDGLEGEHSSLF 591
Query: 553 YDYFRILDLVKNMMQR 568
Y Y RILD VK++M+R
Sbjct: 592 YHYVRILDSVKSIMER 607
>gi|242042531|ref|XP_002468660.1| hypothetical protein SORBIDRAFT_01g049860 [Sorghum bicolor]
gi|241922514|gb|EER95658.1| hypothetical protein SORBIDRAFT_01g049860 [Sorghum bicolor]
Length = 740
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 302/546 (55%), Positives = 379/546 (69%), Gaps = 31/546 (5%)
Query: 48 SKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSPE 107
+ L+ ++ MGF+ ++V KAI++NG+ D+++E LLTY LG + S
Sbjct: 199 ASLVQRYIDMGFAEEIVVKAIKDNGDNGADALVELLLTYQELGNDLNVDNGFASGCVPQT 258
Query: 108 LDGS----FLDGFSDTDSF-EGEEITNPDPD------------KEEKLVSLASMGYSVQE 150
+D S FL+ + D D+ + N D K+ K+ SL MG+ E
Sbjct: 259 VDDSGDDDFLENWDDLDAGGRSTRVANSVDDSGDEDFLHEMSQKDNKIDSLVKMGFPEDE 318
Query: 151 ASIAMERCGPNTSIAELTDFICAAQMA-KAADALLAEIEDKPRPKPS--NGYHKHKKR-- 205
A++A+ RCG + SI+ L D I A+Q A L++ ED R K +G +K +KR
Sbjct: 319 AALAITRCGQDASISVLADSIYASQTAGDGYCGNLSDYEDGGRNKGRFMDGNNKKRKRYG 378
Query: 206 -RMLDYEKP---PIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAP 261
+ L P DEP+ LPNPM+GF +P V+R LP A GPPYFYYENVALAP
Sbjct: 379 SQALGSRGPLDGSADEPMLLPNPMVGFSLPDQWPRPVNRDLPALAMGPPYFYYENVALAP 438
Query: 262 KGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLS 321
KGVW ISRFLYD++PEFVDSKYFCAAARKRGY+HNLP++NR L+P PP+ I A P +
Sbjct: 439 KGVWTIISRFLYDIQPEFVDSKYFCAAARKRGYIHNLPLENRSPLLPKPPRTITVAFPHT 498
Query: 322 RKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLV 381
++WWPSWD R NCLQTC++SAKL E+IR L + PP VQK V++ECRKWNL
Sbjct: 499 KRWWPSWDPRQQFNCLQTCVSSAKLLEKIRVTL--TNSSDPPPPRVQKLVLEECRKWNLA 556
Query: 382 WVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMY 441
WVG NK+APLEPDE+E LLGFPK+HTR GI RT+R++SLGNSFQVDTVAYHLSVLK+MY
Sbjct: 557 WVGLNKVAPLEPDEMEFLLGFPKDHTR--GICRTERFRSLGNSFQVDTVAYHLSVLKDMY 614
Query: 442 PDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
P+G+NVLSLFSGIGGAEVALHRLG+RMK V+SV+ SEVNR I+RSWW+QT Q GTLI+
Sbjct: 615 PEGMNVLSLFSGIGGAEVALHRLGIRMKTVISVEKSEVNRTILRSWWDQT-QTGTLIEIN 673
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
DVQ L + RIE I FGGFDLVIGGSPCNNLAGSNRH R+GLEG+ SSLF+ Y RIL+
Sbjct: 674 DVQTLTSERIEAYIRRFGGFDLVIGGSPCNNLAGSNRHHRNGLEGEHSSLFFQYVRILES 733
Query: 562 VKNMMQ 567
VK++ +
Sbjct: 734 VKSIQR 739
>gi|108705797|gb|ABF93592.1| DNA cytosine methyltransferase Zmet3, putative, expressed [Oryza
sativa Japonica Group]
Length = 626
Score = 582 bits (1501), Expect = e-163, Method: Compositional matrix adjust.
Identities = 317/599 (52%), Positives = 399/599 (66%), Gaps = 83/599 (13%)
Query: 35 LKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSIL-------------- 80
L A+ A+ S + L+ F+GMGF +M+ KAI+E G +N + +L
Sbjct: 41 LPQDANGKANGSGA-LVAEFMGMGFPKEMILKAIKEIGNDNNNLVLLFASGCILNLLFQL 99
Query: 81 --------------ETLLTYSALG---------QSSQAEQHINSDQ-----NSPELDGS- 111
E LLTY A+G S+ A Q + D+ N E D +
Sbjct: 100 LSFLSGDTDTEQLLELLLTYQAIGGDASVGNCSASACAPQTLEVDEEEDDTNWDEYDTAG 159
Query: 112 ------FLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERCGPNTSIA 165
DG D D F +E++ +K+EK+ SL +MG+ EA +A++RCG + +A
Sbjct: 160 NCDRTPHSDGSGDEDFF--QEMS----EKDEKMKSLVNMGFPEDEAKMAIDRCGLDAPVA 213
Query: 166 ELTDFICAAQMA-KAADALLAEIEDKPRPKPSNGYHKHKKRRMLDYEKP----------- 213
L D I A+Q A A L++ ED + + KK R +D K
Sbjct: 214 VLVDSIYASQEAGNGYSANLSDYED----TEFSSFGGRKKTRFVDGSKKRKRYGSGPSGN 269
Query: 214 --PID----EPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDT 267
P D EP+ LPNPM+GF +P+ VHR+LP+ A GPP+FYYENVALAPKGVW T
Sbjct: 270 QVPFDGSHEEPMPLPNPMVGFSLPNERLRSVHRNLPDQALGPPFFYYENVALAPKGVWTT 329
Query: 268 ISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPS 327
ISRFLYD++PEFVDSKYFCAAARKRGY+HNLPI+NR ++P+PP+ I EA P +++WWPS
Sbjct: 330 ISRFLYDIQPEFVDSKYFCAAARKRGYIHNLPIENRSPVLPMPPKTISEAFPNTKRWWPS 389
Query: 328 WDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNK 387
WD R NCLQTC+ASAKLTERIR AL P P VQK+V+DECRKWNLVWVG+NK
Sbjct: 390 WDPRRQFNCLQTCMASAKLTERIRCALGRFSDVPTP--QVQKYVLDECRKWNLVWVGKNK 447
Query: 388 LAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINV 447
+APLEPDE+E LLG+P+NHTR G+SRT+RY++LGNSFQVDTVAYHLSVL++++P+G+NV
Sbjct: 448 VAPLEPDEMEFLLGYPRNHTR--GVSRTERYRALGNSFQVDTVAYHLSVLRDLFPNGMNV 505
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
LSLFSGIGGAEVALHRLG+ MK V+SV+ SEVNR I++SWW+QT Q GTLI+ ADV+ L
Sbjct: 506 LSLFSGIGGAEVALHRLGIHMKTVISVEKSEVNRTILKSWWDQT-QTGTLIEIADVRHLT 564
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
RIE I FGGFDLVIGGSPCNNLAGSNRH RDGLEG+ S+LFYDY RIL+ VK M
Sbjct: 565 TERIETFIRRFGGFDLVIGGSPCNNLAGSNRHHRDGLEGEHSALFYDYIRILEHVKATM 623
>gi|326514650|dbj|BAJ96312.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 302/575 (52%), Positives = 388/575 (67%), Gaps = 43/575 (7%)
Query: 26 NTDLILEALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLT 85
N D + L + ++ + + L++ +V MGF +MV K I+E G + +++LE LLT
Sbjct: 32 NLDAAGPSTLDSNGWANEEAPPTSLVEGYVLMGFPKEMVLKGIKEIGHSDANALLELLLT 91
Query: 86 Y------SALGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPD------ 133
Y +A+G S + S ++ + D DG +D D E ++ D D
Sbjct: 92 YKTLGEDAAVGNCSTSGCFPQSVEDDDDFDFENWDGDNDADGREPNPDSSGDEDFLREMS 151
Query: 134 -KEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMA--------------- 177
K++K+ SL MG+ EA++A+ RCG + ++ L D + A+Q A
Sbjct: 152 EKDDKIKSLVDMGFPEDEANMAITRCGVDAALTVLVDSVYASQAAGDCHYGNLSGYEVTG 211
Query: 178 KAADALLAE-----IEDKPRPKPSNGYHKHKKRRMLDYEKPPIDEPIRLPNPMIGFGVPS 232
D+L +ED + + G RR LD +EP+ LPNPM+GF +P+
Sbjct: 212 SCFDSLGVRKKARLMEDSKKKRKQYGGGAQGNRRPLDGNH---EEPMPLPNPMVGFSLPN 268
Query: 233 NPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKR 292
+ V R LP+ A GPP+FYYENVALAPKGVW TISRFLYD+EPEFVDSK+ CAAARKR
Sbjct: 269 DRLRSVTRRLPQQAIGPPFFYYENVALAPKGVWATISRFLYDIEPEFVDSKHLCAAARKR 328
Query: 293 GYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRK 352
GY+HNLPI+NR ++PLPP+ I+EA P KWWPSWD R NCLQT ++SAKLTERI+
Sbjct: 329 GYIHNLPIENRFPVLPLPPKTIFEAFPHYEKWWPSWDPRRQFNCLQTSMSSAKLTERIQC 388
Query: 353 ALEECDGEPEPPHH-VQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGG 411
AL PPH VQK+VMDECRKWNLVWVG+NK+A LEP EVE LLGFP++HTR G
Sbjct: 389 ALANSG---NPPHRSVQKYVMDECRKWNLVWVGKNKVAHLEPHEVEYLLGFPRDHTR--G 443
Query: 412 ISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNV 471
+ +T+R+KSLGNSFQVDTVAYHLSVLK+M+P+G+NVLSLF+GIGG EVALHRLG+ M+ V
Sbjct: 444 VGKTERFKSLGNSFQVDTVAYHLSVLKDMFPNGVNVLSLFTGIGGGEVALHRLGIHMRTV 503
Query: 472 VSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN 531
VSV+I EVNR I+R WW+QT Q GTLI+ ADV+ L +RI + FGGFDLVIGGSPCN
Sbjct: 504 VSVEIGEVNRRILRGWWDQT-QTGTLIEIADVKSLTNDRIATFVRRFGGFDLVIGGSPCN 562
Query: 532 NLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
NLAGSNRH RDGLEG++S+LFY YFRILD VK+ M
Sbjct: 563 NLAGSNRHHRDGLEGEQSALFYHYFRILDAVKSEM 597
>gi|356502024|ref|XP_003519822.1| PREDICTED: DNA (cytosine-5)-methyltransferase DRM1-like [Glycine
max]
Length = 537
Score = 572 bits (1475), Expect = e-160, Method: Compositional matrix adjust.
Identities = 287/539 (53%), Positives = 367/539 (68%), Gaps = 66/539 (12%)
Query: 38 SASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQ 97
S++S +S+ SKLI FVGMGFS + V KAI ENG +N + I+E LLT +A E+
Sbjct: 52 SSASCSSAKHSKLIHLFVGMGFSRETVIKAIDENGRDNEEDIMEALLTLTA-------EK 104
Query: 98 HINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYSVQEASIAMER 157
+ + K+E L L +MGY +EA A+++
Sbjct: 105 PLTVE-------------------------------KDEALSVLVNMGYPFEEALTAIDK 133
Query: 158 CGPNTSIAELTDFICAAQMAKAADALLAEIEDK--------PRP-KPSNGYHKHKKRRML 208
CGP I+EL DFI A+Q+ K + +K +P +PS Y+ H +++
Sbjct: 134 CGPKAHISELADFISASQLEKGLHSPQESPNNKHDASDYTHEKPCQPSGEYYLHTSKKV- 192
Query: 209 DYEKPPIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTI 268
+G G+ + ++ R P A PYFY+ENVALAPKGVW TI
Sbjct: 193 ----------------KLGLGIFNEASQVISRKFPREVANKPYFYFENVALAPKGVWKTI 236
Query: 269 SRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSW 328
SRFLY++EPE+VDSKYFCAA RKRGY+HNLP NR L+P+PP I EA P ++KWWPSW
Sbjct: 237 SRFLYEIEPEYVDSKYFCAATRKRGYIHNLPTHNRSPLLPIPPLTIQEAFPTTKKWWPSW 296
Query: 329 DTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKL 388
D R+ LNCL T +A +TERIRK LE+ EP P HVQ+ V+ E RKWNLVWVG+NKL
Sbjct: 297 DRRTKLNCLLTRVAPGPVTERIRKLLEKFGDEP--PLHVQENVLVEIRKWNLVWVGKNKL 354
Query: 389 APLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVL 448
APLEPDE EMLLGFP++HTRGGG++RT+RYKSLGN+FQV+TVAYHLSVLK +P+GINVL
Sbjct: 355 APLEPDEYEMLLGFPRDHTRGGGVTRTERYKSLGNAFQVNTVAYHLSVLKGRFPNGINVL 414
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLFSGIGGAEVALHRLG+ +KNVVSV+I+EVNRNI+RSWWEQTNQ+G LI+ DVQ++ +
Sbjct: 415 SLFSGIGGAEVALHRLGMMLKNVVSVEIAEVNRNIIRSWWEQTNQRGNLIEVEDVQKVSS 474
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQ 567
N + Q I FGGFDL+IGGSPCNN++GSNR SR GLEG++SSLFY+YFRI++ V + +
Sbjct: 475 NELSQWITKFGGFDLIIGGSPCNNISGSNRVSRHGLEGEQSSLFYEYFRIVEAVMEIQR 533
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 1 MIDHFVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSASSSASSSKSKLIDHFVGMGFS 60
+I FVGMGFS E V KAI ENG N + I+EALL +A + K + + V MG+
Sbjct: 64 LIHLFVGMGFSRETVIKAIDENGRDNEEDIMEALLTLTAEKPLTVEKDEALSVLVNMGYP 123
Query: 61 VDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSP 106
+ AI + G + S L ++ +SQ E+ ++S Q SP
Sbjct: 124 FEEALTAIDKCGPKAHISELADFIS------ASQLEKGLHSPQESP 163
>gi|357150432|ref|XP_003575456.1| PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like
[Brachypodium distachyon]
Length = 592
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 295/551 (53%), Positives = 381/551 (69%), Gaps = 36/551 (6%)
Query: 41 SSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALG---------- 90
++ + + L++ +VGMGF +MV KAI+E G + +++LE LLTY LG
Sbjct: 50 ANGDAPSTSLVEEYVGMGFPKEMVLKAIKEIGHNDANALLELLLTYKVLGEDPTVGNCST 109
Query: 91 -----QSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMG 145
QS + + + D + + G + DS E+ + ++K+ SL MG
Sbjct: 110 LGCAPQSVEDDDDGDLDSEDWDDEDDADGGEPNFDSSGDEDFLQEMSEHDKKIKSLVDMG 169
Query: 146 YSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLA---EIEDKPRPKPSNGYHKH 202
+ E+++A+ RCG + ++ L D I A+Q A ++ + E+ D S G ++
Sbjct: 170 FPEDESNMAIVRCGVDAALTVLVDSIYASQAAGDCNSRNSSHHEVCD------SFGGRRN 223
Query: 203 KKRRM-----LDYEKPP--IDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYE 255
KK+R +P +E + LPNPM+GF +P+ V R LP+ A GPP+FYYE
Sbjct: 224 KKKRKQYGGGAQGNRPSECHEELMPLPNPMVGFSLPTARLPSVSRRLPKQATGPPFFYYE 283
Query: 256 NVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIY 315
NVALAPKGVW ISR LYD+ PEFVDSKY CA ARKRGYVHNLPI+NR L+PLPP+ I+
Sbjct: 284 NVALAPKGVWTIISRNLYDIAPEFVDSKYMCATARKRGYVHNLPIENRSPLLPLPPKTIF 343
Query: 316 EALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDEC 375
EA P +KWWPSWD R LNC+QTC++SAKLTERI+ AL G+P PP HVQK+VM EC
Sbjct: 344 EAFPHYKKWWPSWDPRRQLNCVQTCVSSAKLTERIQCALAR-SGDP-PPLHVQKYVMHEC 401
Query: 376 RKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLS 435
RKWNLVWVG+NK+APLEPDE+E LLG+P++HTR GI +T RYK LGNSFQVDTVAYHLS
Sbjct: 402 RKWNLVWVGKNKVAPLEPDEMEYLLGYPRDHTR--GIGKTARYKCLGNSFQVDTVAYHLS 459
Query: 436 VLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKG 495
VL++++P+G+NVLSLF+GIGG EVALHRLG+ MK VVSV+ISEVNR I+R WW+QT Q G
Sbjct: 460 VLRDIFPNGLNVLSLFTGIGGGEVALHRLGIHMKTVVSVEISEVNRRILRGWWDQT-QTG 518
Query: 496 TLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDY 555
TLI+ DVQ +++I I FGGFDL+IGGSPCNNLAGSNRH RDGLEG+ SSLFY Y
Sbjct: 519 TLIEIPDVQSFTSDKIRSFIRRFGGFDLIIGGSPCNNLAGSNRHHRDGLEGEHSSLFYHY 578
Query: 556 FRILDLVKNMM 566
RILD VK++M
Sbjct: 579 PRILDTVKDVM 589
>gi|108705798|gb|ABF93593.1| DNA cytosine methyltransferase Zmet3, putative, expressed [Oryza
sativa Japonica Group]
Length = 507
Score = 563 bits (1451), Expect = e-158, Method: Compositional matrix adjust.
Identities = 284/471 (60%), Positives = 350/471 (74%), Gaps = 34/471 (7%)
Query: 114 DGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICA 173
DG D D F+ E++ +K+EK+ SL +MG+ EA +A++RC + +A L D I A
Sbjct: 50 DGSGDEDFFQ--EMS----EKDEKMKSLVNMGFPEDEAKMAIDRC-LDAPVAVLVDSIYA 102
Query: 174 AQMA-KAADALLAEIEDKPRPKPSNGYHKHKKRRMLDYEKP-------------PID--- 216
+Q A A L++ ED + + KK R +D K P D
Sbjct: 103 SQEAGNGYSANLSDYEDTE----FSSFGGRKKTRFVDGSKKRKRYGSGPSGNQVPFDGSH 158
Query: 217 -EPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDV 275
EP+ LPNPM+GF +P+ VHR+LP+ A GPP+FYYENVALAPKGVW TISRFLYD+
Sbjct: 159 EEPMPLPNPMVGFSLPNERLRSVHRNLPDQALGPPFFYYENVALAPKGVWTTISRFLYDI 218
Query: 276 EPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLN 335
+PEFVDSKYFCAAARKRGY+HNLPI+NR ++P+PP+ I EA P +++WWPSWD R N
Sbjct: 219 QPEFVDSKYFCAAARKRGYIHNLPIENRSPVLPMPPKTISEAFPNTKRWWPSWDPRRQFN 278
Query: 336 CLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDE 395
CLQTC+ASAKLTERIR AL P P VQK+V+DECRKWNLVWVG+NK+APLEPDE
Sbjct: 279 CLQTCMASAKLTERIRCALGRFSDVPTP--QVQKYVLDECRKWNLVWVGKNKVAPLEPDE 336
Query: 396 VEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIG 455
+E LLG+P+NHTR G+SRT+RY++LGNSFQVDTVAYHLSVL++++P+G+NVLSLFSGIG
Sbjct: 337 MEFLLGYPRNHTR--GVSRTERYRALGNSFQVDTVAYHLSVLRDLFPNGMNVLSLFSGIG 394
Query: 456 GAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMI 515
GAEVALHRLG+ MK V+SV+ SEVNR I++SWW+QT Q GTLI+ ADV+ L RIE I
Sbjct: 395 GAEVALHRLGIHMKTVISVEKSEVNRTILKSWWDQT-QTGTLIEIADVRHLTTERIETFI 453
Query: 516 NAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
FGGFDLVIGGSPCNNLAGSNRH RDGLEG+ S+LFYDY RIL+ VK M
Sbjct: 454 RRFGGFDLVIGGSPCNNLAGSNRHHRDGLEGEHSALFYDYIRILEHVKATM 504
>gi|7573311|emb|CAB87629.1| putative protein [Arabidopsis thaliana]
Length = 413
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/413 (65%), Positives = 328/413 (79%), Gaps = 11/413 (2%)
Query: 159 GPNTSIAELTDFICAAQMAKAADALLAEIED-KPRPKPSNGYHKHKKRRMLDYEKPPI-- 215
G N IAELTDF+CAAQMA+ E E+ KPR H KKRR +P
Sbjct: 6 GENVDIAELTDFLCAAQMAREFSEFYTEHEEQKPR-------HNIKKRRFESKGEPRSSV 58
Query: 216 -DEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYD 274
DEPIRLPNPMIGFGVP+ P +I HRSLPE A GPP+FYYENVAL PKGVW+TISR L++
Sbjct: 59 DDEPIRLPNPMIGFGVPNEPGLITHRSLPELARGPPFFYYENVALTPKGVWETISRHLFE 118
Query: 275 VEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHL 334
+ PEFVDSKYFC AARKRGY+HNLPI NR + P P I++A PLS++WWP WD R+ L
Sbjct: 119 IPPEFVDSKYFCVAARKRGYIHNLPINNRFQIQPPPKYTIHDAFPLSKRWWPEWDKRTKL 178
Query: 335 NCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPD 394
NC+ TC SA+LT RIR ALE + EPEPP HVQ++V+D+C+KWNLVWVG+NK APLEPD
Sbjct: 179 NCILTCTGSAQLTNRIRVALEPYNEEPEPPKHVQRYVIDQCKKWNLVWVGKNKAAPLEPD 238
Query: 395 EVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGI 454
E+E +LGFPKNHTRGGG+SRT+R+KSLGNSFQVDTVAYHLSVLK ++P GINVLSLF+GI
Sbjct: 239 EMESILGFPKNHTRGGGMSRTERFKSLGNSFQVDTVAYHLSVLKPIFPHGINVLSLFTGI 298
Query: 455 GGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQM 514
GG EVALHRL ++MK VVSV+IS+VNRNI++ +WEQTNQ G LI+F+D+Q L + IE +
Sbjct: 299 GGGEVALHRLQIKMKLVVSVEISKVNRNILKDFWEQTNQTGELIEFSDIQHLTNDTIEGL 358
Query: 515 INAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQ 567
+ +GGFDLVIGGSPCNNLAG NR SR GLEG +SSLF++Y RIL++V+ M+
Sbjct: 359 MEKYGGFDLVIGGSPCNNLAGGNRVSRVGLEGDQSSLFFEYCRILEVVRARMR 411
>gi|255568838|ref|XP_002525390.1| conserved hypothetical protein [Ricinus communis]
gi|223535353|gb|EEF37028.1| conserved hypothetical protein [Ricinus communis]
Length = 479
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 246/346 (71%), Positives = 290/346 (83%), Gaps = 2/346 (0%)
Query: 219 IRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPE 278
+ LPNPMIGFG+P P I R L A GPPYFYYEN AL PKGVW IS FLYD++PE
Sbjct: 116 LHLPNPMIGFGIPHEPWKITERKLHPIAVGPPYFYYENAALTPKGVWSKISSFLYDIQPE 175
Query: 279 FVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQ 338
FVDS YFCAAARKRGYVHNLPI+NR L+P PP I+E LP + KWWPSWD R+ LNCL
Sbjct: 176 FVDSIYFCAAARKRGYVHNLPIQNRFPLLPRPPLTIHEVLPSTEKWWPSWDKRTKLNCLL 235
Query: 339 TCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEM 398
T +AKLTE IRKALE+CDGEP +K+V+++C++WNLVWVG+NK+APLEPDE+EM
Sbjct: 236 TSYGNAKLTECIRKALEDCDGEPT--LRAKKYVLEQCKRWNLVWVGKNKVAPLEPDEMEM 293
Query: 399 LLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAE 458
LLGFPK+HTRGGGI+R DRYK+LGNSFQVDTVAYHLSVLK ++P GI VLSLFSGIGGAE
Sbjct: 294 LLGFPKDHTRGGGINRNDRYKALGNSFQVDTVAYHLSVLKNLFPYGITVLSLFSGIGGAE 353
Query: 459 VALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAF 518
VALHRLG+ + +VVSV+ISEVNRNI RSWWEQTNQKG LI+ DV+++D + I++ I F
Sbjct: 354 VALHRLGIPLNSVVSVEISEVNRNIPRSWWEQTNQKGYLIEIGDVREVDGDSIKRWIKLF 413
Query: 519 GGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
GGFDLVIGGSPCNNLAG+NR +RDGLEG++SSLFYDY+RIL LV++
Sbjct: 414 GGFDLVIGGSPCNNLAGANRRNRDGLEGEQSSLFYDYYRILKLVRD 459
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 33 ALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYS 87
++L+ A+S S S+++ FV MGFS +V +AI ENGE+ SIL++LLTYS
Sbjct: 24 SILRSQANSLTGCSSSRMVHQFVNMGFSEKLVMQAIDENGEDEA-SILDSLLTYS 77
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 1 MIDHFVGMGFSEEVVAKAIQENGEQNTDLILEALLKHS 38
M+ FV MGFSE++V +AI ENGE IL++LL +S
Sbjct: 41 MVHQFVNMGFSEKLVMQAIDENGEDEAS-ILDSLLTYS 77
>gi|242041781|ref|XP_002468285.1| hypothetical protein SORBIDRAFT_01g043010 [Sorghum bicolor]
gi|241922139|gb|EER95283.1| hypothetical protein SORBIDRAFT_01g043010 [Sorghum bicolor]
Length = 576
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 287/552 (51%), Positives = 367/552 (66%), Gaps = 39/552 (7%)
Query: 33 ALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQS 92
+LL + A SAS L++ FVGMG I+ NG+ +S+LE LL Y A+G
Sbjct: 47 SLLVNGAGPSAS-----LVEDFVGMGL--------IKGNGDGGAESLLELLLAYKAIGND 93
Query: 93 SQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPD---------------PDKEEK 137
++ ++ P D ++ D+ + ++ D K+EK
Sbjct: 94 PSLDKS-SASVCGPRTICDDKDILANWDAHDASTSSDRDHASDDSGDEDFLQGLSQKDEK 152
Query: 138 LVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPSN 197
+ SL MG+ EA +A+ RCG + ++ L D I +++ ++ D S
Sbjct: 153 IESLVRMGFPKDEAEMAIVRCGQDAPMSVLIDLIYSSEASE--DGYYGNFSG--HEDDSF 208
Query: 198 GYHKHKKRRMLDYEK-PPIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYEN 256
G K K++R D E+ DEP+ LPNPM+GF +P+ V RSLP A GPP+FYYEN
Sbjct: 209 GGRKEKRKRSEDAEQGSSHDEPMPLPNPMVGFNLPNVSLRSVDRSLPSKAIGPPFFYYEN 268
Query: 257 VALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYE 316
VA+APKGVW TIS+FLYD++PEFVDS++ CAAARKRGYVHNLPI+NR L+PLPP+ I+E
Sbjct: 269 VAIAPKGVWTTISQFLYDIQPEFVDSRFLCAAARKRGYVHNLPIENRSPLLPLPPKTIFE 328
Query: 317 ALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECR 376
A P ++KWWPSWD R NCL T +A KLTE+I AL +C + PP VQK+V++ CR
Sbjct: 329 AFPHTKKWWPSWDPRKQFNCLLTSMAKPKLTEQIHHALAKC--KDPPPRRVQKYVLETCR 386
Query: 377 KWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSV 436
NLVWVG NK+A LEPDE+E LLGFPK+HTR GI R +R+KSLGNSF VDTVAYHLS
Sbjct: 387 TANLVWVGLNKVAHLEPDEMEFLLGFPKDHTR--GIGRPERFKSLGNSFHVDTVAYHLSA 444
Query: 437 LKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGT 496
L++M+P G+NVLSLFSGIGGAEVALHRL +RMK VVSV+ISE NR ++R+WW QT Q GT
Sbjct: 445 LRDMFPHGMNVLSLFSGIGGAEVALHRLDIRMKTVVSVEISETNRFVLRTWWNQT-QTGT 503
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
LI+ DVQ L R+E I GGFDLVIGGSPCNNLAG NR RDGLEG++SSLFY Y+
Sbjct: 504 LIEITDVQSLTTERLESCIRRIGGFDLVIGGSPCNNLAGRNRFHRDGLEGEQSSLFYHYY 563
Query: 557 RILDLVKNMMQR 568
RILD VK++M R
Sbjct: 564 RILDTVKSIMGR 575
>gi|357115496|ref|XP_003559524.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
DRM2-like [Brachypodium distachyon]
Length = 602
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 284/557 (50%), Positives = 370/557 (66%), Gaps = 39/557 (7%)
Query: 37 HSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQ----- 91
+ A+ SASS + FVGMGF +MV K I+E G+ + ++++E LLTY ALG
Sbjct: 59 NGAAPSASS-----VGKFVGMGFPKEMVLKGIKEIGDRDPNALVELLLTYKALGDFPPVG 113
Query: 92 ---------SSQAEQHINSDQNSPELDGSFLDGFSD----TDSFEGEEITNPDPDKEEKL 138
E + + D S + D S D +D E+ ++K+
Sbjct: 114 NCSTSSRCIPQSVEDNDDDDLTSEDWDESDAAAERDHIPISDGSGYEDFLQEMSQMDKKI 173
Query: 139 VSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPSNG 198
L SMG+ EA++A+ RCG + +I+ L D I A++ + + + +E K +G
Sbjct: 174 KYLVSMGFPENEANMAITRCGSDAAISVLVDLIYASEYVE--NCFNSSVERKKARFIEDG 231
Query: 199 YHKHKKR---RMLDYEKPPID----EPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPY 251
K KKR R Y+ PP+D P+RLPNPM+GFG+P +V R LP A GPP+
Sbjct: 232 -KKRKKRYGSRAQRYQ-PPLDGVHEXPLRLPNPMVGFGLPGERLQLVTRRLPALAIGPPF 289
Query: 252 FYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPP 311
FY+ENVA PKG W+ ISR LYD+EPEFVDSK+FCAA R+RGY+HNLPI+ R ++PLPP
Sbjct: 290 FYFENVAXTPKGSWEIISRXLYDIEPEFVDSKFFCAAIRQRGYIHNLPIEGRFPILPLPP 349
Query: 312 QNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFV 371
+ I EA P +KWWPS D+R NCL TC+ SAKL ERI +AL + G P P Q++V
Sbjct: 350 KTILEAFPQFKKWWPSCDSREXFNCLLTCVGSAKLAERIHRALSK-SGNP-PSQGDQEYV 407
Query: 372 MDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVA 431
M ECRKWNLV VG+ K+APLEP+E+E+LLG+P +HT G +++ +RYKSLGNSFQVDTVA
Sbjct: 408 MRECRKWNLVXVGKXKVAPLEPNEMELLLGYPADHT--GQVAKMERYKSLGNSFQVDTVA 465
Query: 432 YHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQT 491
YHLSVLKE +P GINV SLF+GIGGAEVALHRLG+R++ VVSV+ISEV+R+I + W +QT
Sbjct: 466 YHLSVLKEKFPGGINVSSLFTGIGGAEVALHRLGIRLRAVVSVEISEVSRSISKGWCDQT 525
Query: 492 NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSL 551
Q GTLI+ +VQ L +RIE I G FDLVIGGSPCNNL+GSNRH R GL+G +S+L
Sbjct: 526 -QTGTLIEIYEVQSLTDDRIESFIRRLGRFDLVIGGSPCNNLSGSNRHHRVGLDGAQSAL 584
Query: 552 FYDYFRILDLVKNMMQR 568
FYDY RIL VK+ M R
Sbjct: 585 FYDYVRILKSVKSTMAR 601
>gi|357120992|ref|XP_003562206.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
DRM1-like [Brachypodium distachyon]
Length = 612
Score = 518 bits (1333), Expect = e-144, Method: Compositional matrix adjust.
Identities = 278/563 (49%), Positives = 354/563 (62%), Gaps = 65/563 (11%)
Query: 48 SKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSPE 107
+ L++ +VGMGF DMV KAI++ G + +S++E LLTY L +S + + +S +P
Sbjct: 68 ASLVEEYVGMGFPKDMVLKAIKQIGSD-ANSLVELLLTYKVLAESDASVGNPSSSGCAPH 126
Query: 108 -------------------------------LDGSFLDGFSDTDSFEGEEITNPDPDKEE 136
+ FL S D +
Sbjct: 127 SVENDDDDNLDSEDWDDDDDSDGSSDEVDDSISLDFLQEMSKED---------------D 171
Query: 137 KLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKP----- 191
K SL MG+ V+EA +A+ RCG + + L D I A+Q A + + E+ D+
Sbjct: 172 KAKSLVDMGFPVEEAKMAITRCGADAASIVLVDSIYASQAADSGNVFDHEVSDRSFRSFG 231
Query: 192 ---RPKPSNGYHKHKKRRMLDYE--KPPID---EPIRLPNPMIGFGVPSNPDVIVHRSLP 243
R G K KR + + P+D + + LPNPM+GF +P +R LP
Sbjct: 232 ERKRAISIEGSKKKAKRYGGGAQGNRTPLDGSDDEMPLPNPMVGFSLPGGMQRSXNRRLP 291
Query: 244 EAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNR 303
A PP+FYYENVA APKG W +SR LYD+ PEFVDS + CAAARKRGY+HNLPI NR
Sbjct: 292 VLATAPPFFYYENVARAPKGEWREMSRNLYDIHPEFVDSVHLCAAARKRGYIHNLPIVNR 351
Query: 304 HHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEP 363
++PLPP+ I EA P KWWPSWD+R LNCLQT ASAKLTERI+ L P P
Sbjct: 352 SPILPLPPKTILEAFPHYSKWWPSWDSRKKLNCLQTSGASAKLTERIQLTLANSTNPPPP 411
Query: 364 PHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGN 423
HVQK+V+++C++WNLVWVG+NK+APLEP EVE LLGFPK+HTR GI + +R KSLGN
Sbjct: 412 --HVQKYVLNQCKRWNLVWVGKNKVAPLEPHEVEYLLGFPKDHTR--GICKKEREKSLGN 467
Query: 424 SFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNI 483
SFQVDTVAYHLSVL++ +P+G+NVLSLF GIGGAEVALHRLG+R+K VVSV+IS NR I
Sbjct: 468 SFQVDTVAYHLSVLRDKFPNGMNVLSLFIGIGGAEVALHRLGIRLKTVVSVEISPANRRI 527
Query: 484 VRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDG 543
++ WW+QT Q GTLI+ DV+ L ++ I ++ +GGFDLVIGGSPCNNLAGSNRH R G
Sbjct: 528 LKGWWDQT-QTGTLIEIEDVKTLKSDTIASFVSKYGGFDLVIGGSPCNNLAGSNRHHRVG 586
Query: 544 LEGKESSLFYDYFRILDLVKNMM 566
LEG+ SSLFY Y RIL VK M
Sbjct: 587 LEGEHSSLFYHYPRILGDVKRAM 609
>gi|68655485|emb|CAJ01711.1| putative cytosine methyltransferase [Hordeum vulgare subsp.
vulgare]
Length = 377
Score = 517 bits (1332), Expect = e-144, Method: Compositional matrix adjust.
Identities = 250/381 (65%), Positives = 299/381 (78%), Gaps = 10/381 (2%)
Query: 187 IEDKPRPKPSNGYHKHKKRRMLDYEKPPIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAA 246
+ED + + G RR LD +EP+ LPNPM+GF +P++ V R LP+ A
Sbjct: 3 MEDSKKKRKQYGGGAQGNRRPLDGNH---EEPMPLPNPMVGFSLPNDRLRSVTRRLPQQA 59
Query: 247 AGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHL 306
GPP+FYYENVALAPKGVW TISRFLYD+EPEFVDSK+ CAAARKRGY+HNLPI+NR +
Sbjct: 60 IGPPFFYYENVALAPKGVWATISRFLYDIEPEFVDSKHLCAAARKRGYIHNLPIENRFPV 119
Query: 307 VPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHH 366
+PLPP+ I+EA P KWWPSWD R NCLQT ++SAKLTERI+ AL PPH
Sbjct: 120 LPLPPKTIFEAFPHYEKWWPSWDPRRQFNCLQTSMSSAKLTERIQCALANSG---NPPHR 176
Query: 367 -VQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSF 425
VQK+VMDECRKWNLVWVG+NK+A LEP EVE LLGFP++HTR G+ +T+R+KSLGNSF
Sbjct: 177 SVQKYVMDECRKWNLVWVGKNKVAHLEPHEVEYLLGFPRDHTR--GVGKTERFKSLGNSF 234
Query: 426 QVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVR 485
QVDTVAYHLSVLK+M+P+G+NVLSLF+GIGG EVALHRLG+ M+ VVSV+I EVNR I+R
Sbjct: 235 QVDTVAYHLSVLKDMFPNGVNVLSLFTGIGGGEVALHRLGIHMRTVVSVEIGEVNRRILR 294
Query: 486 SWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLE 545
WW+QT Q GTLI+ ADV+ L +RI + FGGFDLVIGGSPCNNLAGSNRH RDGLE
Sbjct: 295 GWWDQT-QTGTLIEIADVKSLTNDRIATFVRRFGGFDLVIGGSPCNNLAGSNRHHRDGLE 353
Query: 546 GKESSLFYDYFRILDLVKNMM 566
G++ +LFY YFRILD VK+ M
Sbjct: 354 GEQFALFYHYFRILDAVKSEM 374
>gi|7671507|emb|CAB89348.1| putative protein [Arabidopsis thaliana]
Length = 375
Score = 515 bits (1327), Expect = e-143, Method: Compositional matrix adjust.
Identities = 246/366 (67%), Positives = 298/366 (81%), Gaps = 6/366 (1%)
Query: 202 HKKRRMLDY--EKPPIDEPIRLPNPMIGFGVPSNPDVIVHRS--LPEAAAGPPYFYYENV 257
+KKRR KP D+ I LP MIGFGVP++P +++HR +P+ A GPP+FYYENV
Sbjct: 4 NKKRRTYTETPRKPNTDQLISLPKEMIGFGVPNHPGLMMHRPVPIPDIARGPPFFYYENV 63
Query: 258 ALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEA 317
A+ PKGVW IS LYD+ PEFVDSK+FCAAARKRGY+HNLPI+NR + P I EA
Sbjct: 64 AMTPKGVWAKISSHLYDIVPEFVDSKHFCAAARKRGYIHNLPIQNRFQIQPPQHNTIQEA 123
Query: 318 LPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRK 377
PL+++WWPSWD R+ LNCL TCIAS++LTE+IR+ALE DGE P VQK+VM EC+K
Sbjct: 124 FPLTKRWWPSWDGRTKLNCLLTCIASSRLTEKIREALERYDGET--PLDVQKWVMYECKK 181
Query: 378 WNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVL 437
WNLVWVG+NKLAPL+ DE+E LLGFP++HTRGGGIS TDRYKSLGNSFQVDTVAYHLSVL
Sbjct: 182 WNLVWVGKNKLAPLDADEMEKLLGFPRDHTRGGGISTTDRYKSLGNSFQVDTVAYHLSVL 241
Query: 438 KEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTL 497
K ++P+GINVLSLF+GIGG EVALHRL ++M VVSV+IS+ NRNI+RS+WEQTNQKG L
Sbjct: 242 KPLFPNGINVLSLFTGIGGGEVALHRLQIKMNVVVSVEISDANRNILRSFWEQTNQKGIL 301
Query: 498 IDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
+F DVQ+LD N IE++++ +GGFDLVIGGSPCNNLAG NRH R GL G+ SSLF+DY R
Sbjct: 302 REFKDVQKLDDNTIERLMDEYGGFDLVIGGSPCNNLAGGNRHHRVGLGGEHSSLFFDYCR 361
Query: 558 ILDLVK 563
IL+ V+
Sbjct: 362 ILEAVR 367
>gi|326504862|dbj|BAK06722.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 579
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/565 (43%), Positives = 352/565 (62%), Gaps = 54/565 (9%)
Query: 33 ALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQS 92
+ L + ++ + + LI+ +V MGF ++V K ++E G + D++LE +LTY ALG
Sbjct: 39 STLDSNGRANEEAPSTALIEEYVAMGFPKEIVLKGVKEIGHSDADALLELILTYQALGAD 98
Query: 93 SQAEQHINS-------DQNSPELDGSFLDGFSDTDSFEGEEITNPDP----------DKE 135
+ S +++ + D F + D G+E DP K+
Sbjct: 99 DTVDNCSTSGCAPHSVEEDDDDDDLDFENWDDKNDDVAGKEPNCDDPGDEDFLREMSQKD 158
Query: 136 EKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIED-KPRPK 194
+K+ SL MG+ EA+IA+ RCG + + EL D I A+Q+A D I D + +
Sbjct: 159 KKINSLVGMGFPEDEANIAITRCGVDADLVELVDSISASQVA--GDLNSRNISDYQVMDR 216
Query: 195 PSNGYHKHKKRRMLDYEK-------PPI----DEPIRLPNPMIGFGVPSNPDVIVHRSLP 243
+ + KK R+++ K P DEP R+P+PM+GF +PS+ V R LP
Sbjct: 217 CFDSFGGRKKARLMEESKMRSMQYGPSFAGSHDEPTRIPDPMVGFNLPSDRQPSVIRMLP 276
Query: 244 EAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNR 303
E A GPP+FY++N A AP+G W TIS+ YD++PEFVDSKYFCAA+R+ GY+HNLP+++R
Sbjct: 277 EQAIGPPFFYFQNAARAPRGAWTTISKKFYDIQPEFVDSKYFCAASREIGYIHNLPVEDR 336
Query: 304 HHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEP 363
L+P PP+ +++A P ++WWPSWD R LNCLQ +A+AKL +I+ AL
Sbjct: 337 EALLPFPPKTVFDAFPQYKRWWPSWDQRRQLNCLQASVATAKLINQIQHALARSGN---- 392
Query: 364 PHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGN 423
P VQ V+DEC+ W+LVWVG++K++ LEPDE+E LLGFP++HTR G+ +T+RY+SL N
Sbjct: 393 PLSVQNRVVDECKTWDLVWVGKDKVSQLEPDEMESLLGFPRDHTR--GVVKTERYRSLAN 450
Query: 424 SFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNI 483
SFQVDT+AYHLSVL++M+P+GINVLSL +GIGG VALHRLG+RM+ VSV+ E NR I
Sbjct: 451 SFQVDTIAYHLSVLRDMFPNGINVLSLSTGIGGGAVALHRLGIRMRTAVSVEKGETNRRI 510
Query: 484 VRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDG 543
WW+QT Q G L++ AD++ L +RI ++ +GGFDLVIGGSP
Sbjct: 511 FNGWWDQT-QTGKLVEIADMKSLTNDRIASLVGRYGGFDLVIGGSP-------------- 555
Query: 544 LEGKESSLFYDYFRILDLVKNMMQR 568
++S+L YDY RILD +K+ M R
Sbjct: 556 --SEQSALLYDYPRILDAIKSAMAR 578
>gi|218200251|gb|EEC82678.1| hypothetical protein OsI_27322 [Oryza sativa Indica Group]
Length = 467
Score = 452 bits (1164), Expect = e-124, Method: Compositional matrix adjust.
Identities = 259/540 (47%), Positives = 328/540 (60%), Gaps = 89/540 (16%)
Query: 33 ALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQS 92
+L + + S+ S L+ +F+GMGFS +MV +AI+E G+ +++ ILE LLTY A+G
Sbjct: 8 GILMDANGKANGSTPSALVAYFLGMGFSREMVFRAIKEIGDTDSEQILELLLTYQAIG-- 65
Query: 93 SQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYSVQEAS 152
++ + + +SP D LD E EE N D D +V
Sbjct: 66 --SDPSVGNSSHSP-CDPQILDE-------EDEEDVNWDEDD------------TVDNFD 103
Query: 153 IAMERCGPNTSIAELTDFICAAQMAKAADALLAEIED-KPRPK----PSNGYHKHKKRRM 207
A G E + F + K D + E + RP+ P +G H
Sbjct: 104 RATYSDGSGDEDTEFSSF-GGRKKTKLIDGTKKKRERYRSRPQWNQVPFDGSH------- 155
Query: 208 LDYEKPPIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDT 267
+EP+ LPNPM+GF +P++ VHR+LP+ A GPP+FYYENVALAPKGVW T
Sbjct: 156 --------EEPMPLPNPMVGFSLPNDGLRSVHRNLPDHALGPPFFYYENVALAPKGVWTT 207
Query: 268 ISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPS 327
ISRFLYD+ PEFVDSKYFCAAARKRGY+HNLPI+NR ++P+PP+ I EA P ++ WWPS
Sbjct: 208 ISRFLYDIYPEFVDSKYFCAAARKRGYIHNLPIENRSPILPIPPKTISEAFPSTKMWWPS 267
Query: 328 WDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNK 387
WD R NCLQT +ASAK TERIR AL G+ PP VQK V++ECRKWNLVWVG+NK
Sbjct: 268 WDPRRQFNCLQTYVASAKHTERIRCALGRF-GDALPP-AVQKSVLEECRKWNLVWVGKNK 325
Query: 388 LAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINV 447
+A LEPDE+E LLG+P+NHTR G+SR + LG
Sbjct: 326 VATLEPDEMEFLLGYPRNHTR--GVSRKRDIELLG------------------------- 358
Query: 448 LSLFSGIGGAEVALH-RLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
+H +LG+RMK VVSV+ISE N ++RSWW+QT Q GTLI+ ADVQ L
Sbjct: 359 -------------IHSKLGIRMKTVVSVEISEANMALLRSWWDQT-QTGTLIEIADVQNL 404
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
A RIE I FGGFDLVIGG+PCNNLAGSNR+ RDGLEGK S+LFY Y+RILD VK +M
Sbjct: 405 TAERIELFIRRFGGFDLVIGGNPCNNLAGSNRYDRDGLEGKHSTLFYHYYRILDSVKTIM 464
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 1 MIDHFVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSASSSASS 45
++ +F+GMGFS E+V +AI+E G+ +++ ILE LL + A S S
Sbjct: 25 LVAYFLGMGFSREMVFRAIKEIGDTDSEQILELLLTYQAIGSDPS 69
>gi|213498016|emb|CAS84143.1| domains rearranged methyltransferase [Nicotiana tomentosiformis]
Length = 259
Score = 446 bits (1147), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/261 (79%), Positives = 235/261 (90%), Gaps = 2/261 (0%)
Query: 265 WDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKW 324
WDTISRFLYD+EPEFVDSKYFCAAARKRGY+HNLP++NR L PL P+ I+EALPLS+KW
Sbjct: 1 WDTISRFLYDIEPEFVDSKYFCAAARKRGYIHNLPVENRFPLFPLAPRTIHEALPLSKKW 60
Query: 325 WPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVG 384
WPSWD R+ LNCLQT I SA+LT RIRKA+E+ DGEP P VQKFV+D+CRKWNLVWVG
Sbjct: 61 WPSWDPRTKLNCLQTAIGSAQLTNRIRKAVEDFDGEP--PMRVQKFVLDQCRKWNLVWVG 118
Query: 385 RNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDG 444
RNK+APLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLK+++P G
Sbjct: 119 RNKVAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKDLFPGG 178
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
INVLSLFSGIGG EVAL+RLG+ + VVSV+ SEVNR+IVRSWWEQTNQ+G LI F DVQ
Sbjct: 179 INVLSLFSGIGGGEVALYRLGIPLNTVVSVEKSEVNRDIVRSWWEQTNQRGNLIHFNDVQ 238
Query: 505 QLDANRIEQMINAFGGFDLVI 525
QL+ +R+EQ+I +FGGFDLVI
Sbjct: 239 QLNGDRLEQLIESFGGFDLVI 259
>gi|42766606|gb|AAS45433.1| At5g15380 [Arabidopsis thaliana]
Length = 307
Score = 442 bits (1136), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/308 (67%), Positives = 254/308 (82%), Gaps = 4/308 (1%)
Query: 211 EKPPIDEPIRLPNPMIGFGVPSNPDVIVHRS--LPEAAAGPPYFYYENVALAPKGVWDTI 268
KP D+ I LP MIGFGVP++P +++HR +P+ A GPP+FYYENVA+ PKGVW I
Sbjct: 1 RKPNTDQLISLPKEMIGFGVPNHPGLMMHRPVPIPDIARGPPFFYYENVAMTPKGVWAKI 60
Query: 269 SRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSW 328
S LYD+ PEFVDSK+FCAAARKRGY+HNLPI+NR + P I EA PL+++WWPSW
Sbjct: 61 SSHLYDIVPEFVDSKHFCAAARKRGYIHNLPIQNRFQIQPPQHNTIQEAFPLTKRWWPSW 120
Query: 329 DTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKL 388
D R+ LNCL TCIAS++LTE+IR+ALE DGE P VQK+VM EC+KWNLVWVG+NKL
Sbjct: 121 DGRTKLNCLLTCIASSRLTEKIREALERYDGET--PLDVQKWVMYECKKWNLVWVGKNKL 178
Query: 389 APLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVL 448
APL+ DE+E LLGFP++HTRGGGIS TDRYKSLGNSFQVDTVAYHLSVLK ++P+GINVL
Sbjct: 179 APLDADEMEKLLGFPRDHTRGGGISTTDRYKSLGNSFQVDTVAYHLSVLKPLFPNGINVL 238
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF+GIGG EVALHRL ++M VVSV+IS+ NRNI+RS+WEQTNQKG L +F DVQ+LD
Sbjct: 239 SLFTGIGGGEVALHRLQIKMNVVVSVEISDANRNILRSFWEQTNQKGILREFKDVQKLDD 298
Query: 509 NRIEQMIN 516
N IE++++
Sbjct: 299 NTIERLMD 306
>gi|115461927|ref|NP_001054563.1| Os05g0133900 [Oryza sativa Japonica Group]
gi|113578114|dbj|BAF16477.1| Os05g0133900 [Oryza sativa Japonica Group]
Length = 667
Score = 354 bits (909), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 224/638 (35%), Positives = 333/638 (52%), Gaps = 101/638 (15%)
Query: 4 HFVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSA---SSSASSSKSKLID-------- 52
F+GMGFS +V + +Q++G++++D ILEALL SA S S S S L D
Sbjct: 53 QFIGMGFSPMLVDRVLQKHGDRDSDTILEALLSQSALQKSGSESGSLGDLFDSDNEENSS 112
Query: 53 HFV-------------------------GMGFSVDMVAKAIQENGEENTDSILETLLTYS 87
HF M FS V A+ + GEE + LE L+ +
Sbjct: 113 HFAPRKEVIQDIKVEADSSSEKRSYLLSTMNFSQREVDLALNQLGEEAS---LEQLVDFI 169
Query: 88 ALGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYS 147
GQ S + S E+ L G D K + L MG++
Sbjct: 170 VTGQVSGCSGGNENGDASNEVKDESLFGVMD------------------KTLHLLQMGFT 211
Query: 148 VQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIE----DKPRPK-----PSNG 198
+E S +++ GP ++ EL D I A ++A + + ++E D+ PSN
Sbjct: 212 EEEVSSVIDKAGPEATVLELADTIFARRIASSIEQKEVKVEPDFLDETETSYSAYHPSNS 271
Query: 199 ---YH---------KHKKRRMLD---------YEKPPIDEPIRLPNPMIGFG-VPSNPDV 236
Y+ K K +D +P +D ++ G V D
Sbjct: 272 GLRYYDDDHDNIRIKRAKHMFIDDSAGSSSRAGNQPNLDPWLKDHRATTSDGSVKEEFDA 331
Query: 237 I---VHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRG 293
+ + R++ A PPYF Y NV PK W +S FLY+VEPEFV+S++F A +RK G
Sbjct: 332 MTPGIRRNVRSDVANPPYFLYGNVVEIPKATWRQLSEFLYNVEPEFVNSQFFSALSRKEG 391
Query: 294 YVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIAS-AKLTERIRK 352
Y+HNLP + R +LVP P I EA P +R+ WPSWDTR LN + T +A +L ER+ K
Sbjct: 392 YIHNLPTEGRRNLVPRSPMTIEEAFPFTRQCWPSWDTRKQLNSVATEVAGIEQLCERLGK 451
Query: 353 ALEECDG--EPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGG 410
+ + G E H+ M +C+ NL+WVG ++L+PL+P +VE +LG+P+ HT
Sbjct: 452 MVRDSGGYLSQEKKTHI----MHQCKLANLIWVGPDRLSPLDPQQVERILGYPRKHTNLF 507
Query: 411 GISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKN 470
G++ DR +++ SFQ DT+ Y LSVLK++YPDG+ VLS++SGIGGA +ALHRLG+ ++
Sbjct: 508 GLNPQDRIEAMRYSFQTDTLGYLLSVLKDLYPDGLRVLSIYSGIGGAAIALHRLGIPLQC 567
Query: 471 VVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPC 530
VVSVD S+ NR I+R WW T QKG L + +L N +E ++ FGGFD++IGG+
Sbjct: 568 VVSVDQSDTNRKILRRWWSNTEQKGQLRQINTIWKLKINVLEDLVKEFGGFDIIIGGNFS 627
Query: 531 NNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
+ G+ +S G+ +S+ F++Y R++ VK++M R
Sbjct: 628 SCKGGTTVNSSMGM---DSNQFFEYVRVVQRVKHIMGR 662
>gi|50878401|gb|AAT85176.1| putative DNA methyltransferase DMT106 [Oryza sativa Japonica Group]
gi|215693344|dbj|BAG88726.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 680
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 224/638 (35%), Positives = 333/638 (52%), Gaps = 101/638 (15%)
Query: 4 HFVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSA---SSSASSSKSKLID-------- 52
F+GMGFS +V + +Q++G++++D ILEALL SA S S S S L D
Sbjct: 53 QFIGMGFSPMLVDRVLQKHGDRDSDTILEALLSQSALQKSGSESGSLGDLFDSDNEENSS 112
Query: 53 HFV-------------------------GMGFSVDMVAKAIQENGEENTDSILETLLTYS 87
HF M FS V A+ + GEE + LE L+ +
Sbjct: 113 HFAPRKEVIQDIKVEADSSSEKRSYLLSTMNFSQREVDLALNQLGEEAS---LEQLVDFI 169
Query: 88 ALGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYS 147
GQ S + S E+ L G D K + L MG++
Sbjct: 170 VTGQVSGCSGGNENGDASNEVKDESLFGVMD------------------KTLHLLQMGFT 211
Query: 148 VQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIE----DKPRPK-----PSNG 198
+E S +++ GP ++ EL D I A ++A + + ++E D+ PSN
Sbjct: 212 EEEVSSVIDKAGPEATVLELADTIFARRIASSIEQKEVKVEPDFLDETETSYSAYHPSNS 271
Query: 199 ---YH---------KHKKRRMLD---------YEKPPIDEPIRLPNPMIGFG-VPSNPDV 236
Y+ K K +D +P +D ++ G V D
Sbjct: 272 GLRYYDDDHDNIRIKRAKHMFIDDSAGSSSRAGNQPNLDPWLKDHRATTSDGSVKEEFDA 331
Query: 237 I---VHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRG 293
+ + R++ A PPYF Y NV PK W +S FLY+VEPEFV+S++F A +RK G
Sbjct: 332 MTPGIRRNVRSDVANPPYFLYGNVVEIPKATWRQLSEFLYNVEPEFVNSQFFSALSRKEG 391
Query: 294 YVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIAS-AKLTERIRK 352
Y+HNLP + R +LVP P I EA P +R+ WPSWDTR LN + T +A +L ER+ K
Sbjct: 392 YIHNLPTEGRRNLVPRSPMTIEEAFPFTRQCWPSWDTRKQLNSVATEVAGIEQLCERLGK 451
Query: 353 ALEECDG--EPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGG 410
+ + G E H+ M +C+ NL+WVG ++L+PL+P +VE +LG+P+ HT
Sbjct: 452 MVRDSGGYLSQEKKTHI----MHQCKLANLIWVGPDRLSPLDPQQVERILGYPRKHTNLF 507
Query: 411 GISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKN 470
G++ DR +++ SFQ DT+ Y LSVLK++YPDG+ VLS++SGIGGA +ALHRLG+ ++
Sbjct: 508 GLNPQDRIEAMRYSFQTDTLGYLLSVLKDLYPDGLRVLSIYSGIGGAAIALHRLGIPLQC 567
Query: 471 VVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPC 530
VVSVD S+ NR I+R WW T QKG L + +L N +E ++ FGGFD++IGG+
Sbjct: 568 VVSVDQSDTNRKILRRWWSNTEQKGQLRQINTIWKLKINVLEDLVKEFGGFDIIIGGNFS 627
Query: 531 NNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
+ G+ +S G+ +S+ F++Y R++ VK++M R
Sbjct: 628 SCKGGTTVNSSMGM---DSNQFFEYVRVVQRVKHIMGR 662
>gi|218196042|gb|EEC78469.1| hypothetical protein OsI_18342 [Oryza sativa Indica Group]
Length = 693
Score = 351 bits (901), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 216/595 (36%), Positives = 321/595 (53%), Gaps = 77/595 (12%)
Query: 30 ILEALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSAL 89
+L A +K SSS S + F+GMGFS +V + +Q++G+ ++D+ILE LL+ SAL
Sbjct: 102 LLRATVKEEVEGQPSSSSSHVRSQFIGMGFSPMLVDRVLQKHGDRDSDTILEALLSQSAL 161
Query: 90 GQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNP------------DPDKEEK 137
Q S GS D F D+D+ E P D E++
Sbjct: 162 -------------QKSGSESGSLGDLF-DSDNEENSSHFAPRKEVIQDIKVEADSSSEKR 207
Query: 138 LVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMA---------------KAADA 182
L++M +S +E +A+ + G S+ +L DFI Q++ K
Sbjct: 208 SYLLSTMNFSQREVDLALNQLGEEASLEQLVDFIVTGQVSGCSGGNENGDASNEVKVEPD 267
Query: 183 LLAEIEDKPRP-KPSNG---YH---------KHKKRRMLD---------YEKPPIDEPIR 220
L E E PSN Y+ K K +D +P +D ++
Sbjct: 268 FLDETETSYSAYHPSNSGLRYYDDDHDNIRIKRAKHMFIDDSAGSSSRAGNQPNLDPWLK 327
Query: 221 LPNPMIGFG-VPSNPDVI---VHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVE 276
G V D + + R++ A PPYF Y NV PK W +S FLY+VE
Sbjct: 328 DHRATTSDGSVKEEFDAMTPGIRRNVRSDVANPPYFLYGNVVEIPKATWRQLSEFLYNVE 387
Query: 277 PEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNC 336
PEFV+S++F A +RK GY+HNLP + R +LVP P I EA P +R+ WPSWDTR LN
Sbjct: 388 PEFVNSQFFSALSRKEGYIHNLPTEGRRNLVPRSPMTIEEAFPFTRQCWPSWDTRKQLNS 447
Query: 337 LQTCIASA-KLTERIRKALEECDG--EPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEP 393
+ T +A +L ER+ K + + G E H+ M +C+ NL+WVG ++L+PL+P
Sbjct: 448 VATEVAGIEQLCERLGKMVRDSGGYLSQEKKTHI----MHQCKLANLIWVGPDRLSPLDP 503
Query: 394 DEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSG 453
+VE +LG+P+ HT G++ DR +++ SFQ DT+ Y LSVLK++YPDG+ VLS++SG
Sbjct: 504 QQVERILGYPRKHTNLFGLNPQDRIEAMRYSFQTDTLGYLLSVLKDLYPDGLRVLSIYSG 563
Query: 454 IGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQ 513
IGGA +ALHRLG+ ++ VVSVD S+ NR I+R WW T QKG L + +L N +E
Sbjct: 564 IGGAAIALHRLGIPLQCVVSVDQSDTNRKILRRWWSNTEQKGQLRQINTIWKLKINVLED 623
Query: 514 MINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
++ FGGFD++IGG+ + G+ +S G+ +S+ F++Y R++ VK++M R
Sbjct: 624 LVKEFGGFDIIIGGNFSSCKGGTTVNSTMGM---DSNQFFEYVRVVQRVKHIMGR 675
>gi|302757657|ref|XP_002962252.1| hypothetical protein SELMODRAFT_76095 [Selaginella moellendorffii]
gi|300170911|gb|EFJ37512.1| hypothetical protein SELMODRAFT_76095 [Selaginella moellendorffii]
Length = 338
Score = 338 bits (867), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 157/327 (48%), Positives = 217/327 (66%), Gaps = 5/327 (1%)
Query: 241 SLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPI 300
SL A PYFY+ENV P G WD IS LY ++PEFV + +F + R RGY+HNLP+
Sbjct: 17 SLTSTQARKPYFYFENVRTMPNGSWDIISNSLYGIQPEFVCASHFSVSRRARGYIHNLPL 76
Query: 301 KNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGE 360
+NR ++P+PP+ I E LP + ++ P+WDTR LNC+ TC +A +++ +
Sbjct: 77 ENRQLILPIPPKTIREFLPATVQYTPAWDTRQQLNCINTCGNTASFCRNVQRLM----AA 132
Query: 361 PEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKS 420
EP +K +M R+WNLVW G +PLE E+E LG+ + HTRG I+ +R+KS
Sbjct: 133 GEPSEEAKKTIMSLVRRWNLVWTGPGTCSPLEAHEIEQALGYERGHTRGA-ITINERFKS 191
Query: 421 LGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVN 480
LGN+FQVD V +HLS L+ ++PDGI +LSLFSGIGGAEVALHR G+++K VVSV+ + N
Sbjct: 192 LGNTFQVDVVGFHLSALRPLFPDGIRMLSLFSGIGGAEVALHRAGIKLKFVVSVESNVDN 251
Query: 481 RNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHS 540
R I+ WW + Q G DVQ L + +++ GGFDLVIGGSPCNNL G+NR S
Sbjct: 252 RRILERWWSTSGQTGQHRILDDVQDLTMAVVARLMEESGGFDLVIGGSPCNNLTGNNRSS 311
Query: 541 RDGLEGKESSLFYDYFRILDLVKNMMQ 567
R GL G+ S LF+++ RIL+LV+++ +
Sbjct: 312 RTGLGGEHSVLFFEFSRILNLVRSLTR 338
>gi|115486934|ref|NP_001065954.1| Os12g0108900 [Oryza sativa Japonica Group]
gi|77553397|gb|ABA96193.1| DNA cytosine methyltransferase Zmet3, putative [Oryza sativa
Japonica Group]
gi|113648461|dbj|BAF28973.1| Os12g0108900 [Oryza sativa Japonica Group]
Length = 437
Score = 338 bits (867), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 196/426 (46%), Positives = 264/426 (61%), Gaps = 46/426 (10%)
Query: 33 ALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEEN----------------- 75
+L + + S+ S L+ +F+GMGFS +MV +AI+E G +N
Sbjct: 8 GILMDANGKANGSAPSALVAYFLGMGFSREMVFRAIKEIGNDNNNTFPHLLQLLPFLSGD 67
Query: 76 TDS--ILETLLTYSALGQSSQAEQHINSDQNSPE-LD-GSFLDGFSDTDSFEGEEITNPD 131
TDS ILE LLTY L + + E + ++ + D ++ DG D D + E++
Sbjct: 68 TDSEQILELLLTYQILEEEDEEEDVNWDEDDTVDNFDRATYSDGSGDEDFLQ--EMS--- 122
Query: 132 PDKEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICA---------AQMAKAADA 182
+K+EK+ SL SMG+ EA A+ RCG + S+ L + I A ++ D
Sbjct: 123 -EKDEKIKSLVSMGFPEDEAMRAITRCGLDASVDLLVESIYAPASAGNVYFTNLSDYEDT 181
Query: 183 LLAEIEDKPRPKPSNGYHKHKKR--RMLDYEKPPID----EPIRLPNPMIGFGVPSNPDV 236
+ + + K +G K ++R + + P D EP+ LPNPM+GF +P++
Sbjct: 182 EFSSFGGRKKTKLIDGTKKKRERYRSRPQWNQVPFDGSHEEPMPLPNPMVGFSLPNDGLR 241
Query: 237 IVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVH 296
VHR+LP+ A GPP+FYYENVALAPKGVW TISRFLYD+ PEFVDSKYFCAAARKRGY+H
Sbjct: 242 SVHRNLPDHALGPPFFYYENVALAPKGVWTTISRFLYDIYPEFVDSKYFCAAARKRGYIH 301
Query: 297 NLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEE 356
NLPI+NR ++P+PP+ I EA P ++ WWPSWD R NCLQT +ASAK TERIR AL
Sbjct: 302 NLPIENRSPVLPIPPKTISEAFPSTKMWWPSWDPRRQFNCLQTYVASAKHTERIRCALGR 361
Query: 357 CDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTD 416
G+ PP VQK V++ECRKWNLVWVG+NK+A LEPDE+E LLG+P+NHTR G+SR
Sbjct: 362 F-GDALPP-AVQKSVLEECRKWNLVWVGKNKVATLEPDEMEFLLGYPRNHTR--GVSRKR 417
Query: 417 RYKSLG 422
+ LG
Sbjct: 418 DIELLG 423
>gi|302763491|ref|XP_002965167.1| hypothetical protein SELMODRAFT_83383 [Selaginella moellendorffii]
gi|300167400|gb|EFJ34005.1| hypothetical protein SELMODRAFT_83383 [Selaginella moellendorffii]
Length = 338
Score = 337 bits (863), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 156/327 (47%), Positives = 216/327 (66%), Gaps = 5/327 (1%)
Query: 241 SLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPI 300
SL A PYFY+ENV P G WD IS LY ++PEFV + +F + R RGY+HNLP+
Sbjct: 17 SLTSTQARKPYFYFENVRTMPNGSWDIISNSLYGIQPEFVCASHFSVSRRARGYIHNLPL 76
Query: 301 KNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGE 360
+NR ++P+PP+ I E LP + ++ P+WDTR LNC+ TC +A +++ +
Sbjct: 77 ENRQLILPIPPKTIREFLPATVQYTPAWDTRQQLNCINTCGNTASFCRNVQRLM----AA 132
Query: 361 PEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKS 420
EP +K +M R+WNLVW G +PLE E+E LG+ + HTRG I+ +R+KS
Sbjct: 133 GEPSEEAKKTIMSLVRRWNLVWTGPGTCSPLEAHEIEQALGYERGHTRGA-ITINERFKS 191
Query: 421 LGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVN 480
LGN+FQVD V +HLS L+ ++PDGI +LSLFSGIGGAEVALHR G+++K VV V+ + N
Sbjct: 192 LGNTFQVDVVGFHLSALRPLFPDGIRMLSLFSGIGGAEVALHRAGIKLKFVVCVESNVDN 251
Query: 481 RNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHS 540
R I+ WW + Q G DVQ L + +++ GGFDLVIGGSPCNNL G+NR S
Sbjct: 252 RRILERWWSTSGQTGQHRILDDVQDLTMAVVARLMEESGGFDLVIGGSPCNNLTGNNRSS 311
Query: 541 RDGLEGKESSLFYDYFRILDLVKNMMQ 567
R GL G+ S LF+++ RIL+LV+++ +
Sbjct: 312 RTGLGGEHSVLFFEFSRILNLVRSLTR 338
>gi|225432124|ref|XP_002264226.1| PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Vitis
vinifera]
Length = 712
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/378 (44%), Positives = 241/378 (63%), Gaps = 17/378 (4%)
Query: 198 GYHKHKKRRMLDYEKPPIDEPIRLPNPMIG----FGVPSNPDVIVHRSLPEAAAGPPYFY 253
G HK RM P+ P R N + G FG+ S + +SL + A PPYF+
Sbjct: 343 GDHKFSSCRM------PL--PRRDLNQVAGQLNKFGMSSISKPMPCKSLDQLVAKPPYFF 394
Query: 254 YENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQN 313
Y NV W+ IS+FLY +EPEFV++++F A RK GY+HNLP +NR H++P PP
Sbjct: 395 YGNVTNVSHDSWNKISQFLYALEPEFVNTQFFSALNRKEGYIHNLPSENRFHILPKPPMT 454
Query: 314 IYEALPLSRKWWPSWDTRSHLNCLQTCIAS-AKLTERIRKALEECDGEPEPPHHVQKFVM 372
I E +P ++KWWPSWDTR L+C+ + + ++L +R+ K L D Q+ ++
Sbjct: 455 IEEVIPYTKKWWPSWDTRKQLSCISSETSGISQLCDRLGKIL--VDSRGLLSFEQQRDIL 512
Query: 373 DECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAY 432
CR NLVWVG+ KL+P+EP+ +E +LG+P NHTR S +R +SL + FQ+DT+ Y
Sbjct: 513 HHCRTLNLVWVGQCKLSPIEPEHLERILGYPLNHTRVPEYSLIERLQSLRHCFQIDTLGY 572
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTN 492
HLSVLK M+P G+ +LSLFSGIGGAE+ LH+LG+ +K VVSV+ISE RNI++ WW T
Sbjct: 573 HLSVLKSMFPKGLTMLSLFSGIGGAELTLHQLGIHLKGVVSVEISETKRNILKKWWHNTG 632
Query: 493 QKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDG--LEGKESS 550
Q G L+ D+Q+L ++++E +I FGGFD VI +PC + +++ DG L G + S
Sbjct: 633 QTGELVQIDDIQKLASSKLESLIEKFGGFDFVICQNPCTYSSRNSKMVADGDSLTGFDFS 692
Query: 551 LFYDYFRILDLVKNMMQR 568
LF ++ R+L V++ M+R
Sbjct: 693 LFCEFVRVLHRVRSTMER 710
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 14/151 (9%)
Query: 36 KHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQS-SQ 94
+H + ASSS SKL F+GMGF +V K I+E GE++ D +LETL +AL +S S+
Sbjct: 41 RHIGHNGASSSGSKLRSSFIGMGFLPSLVDKVIEEKGEDDVDLLLETLCANAALQKSISE 100
Query: 95 AEQHINS-----DQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYSVQ 149
+ ++S D N+P F GF + + N D K +L M +SV
Sbjct: 101 SSDSLDSFLNDEDTNNPP---KFSAGFHPKEEPDVSSGVNDD-----KRATLVMMKFSVD 152
Query: 150 EASIAMERCGPNTSIAELTDFICAAQMAKAA 180
E AM++ G + EL DFI AAQ+A ++
Sbjct: 153 EVEFAMDKLGEGAPVNELVDFIIAAQIAGSS 183
>gi|255556520|ref|XP_002519294.1| conserved hypothetical protein [Ricinus communis]
gi|223541609|gb|EEF43158.1| conserved hypothetical protein [Ricinus communis]
Length = 678
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/352 (45%), Positives = 225/352 (63%), Gaps = 5/352 (1%)
Query: 220 RLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEF 279
++ + GF +P P +S+ A PPYF Y NVA W IS+FLY VEPEF
Sbjct: 327 KVDTEITGFRIPREPKFKSCKSVDRMVAKPPYFLYGNVATVSLDTWGKISQFLYAVEPEF 386
Query: 280 VDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQ- 338
V++++F A +RK GYVHNLP +NR H++P PP +I +A+P +KWWPSWDTR L+ +
Sbjct: 387 VNTQFFSALSRKEGYVHNLPTENRFHILPKPPMSILDAMPHIKKWWPSWDTRKQLSFINY 446
Query: 339 TCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEM 398
++L +R+ + L + G ++ ++ C K NLVWVG +K+ P+EP+ +E+
Sbjct: 447 ETNGLSQLCDRLGRMLTDSRGLISSQQ--KRDILHHCHKLNLVWVGLHKVRPIEPEHLEL 504
Query: 399 LLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAE 458
+LG+P NHT+ S T+R +L SFQ+DT+ YHLSVLK M+P+GI VLSLFSGIGGAE
Sbjct: 505 ILGYPLNHTQTTEGSLTERLHALRYSFQIDTLGYHLSVLKSMFPEGITVLSLFSGIGGAE 564
Query: 459 VALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAF 518
VALHRLG+ MK VVSV+ SE R I+R WW + Q G L D+Q+L +I+++I F
Sbjct: 565 VALHRLGIHMKGVVSVETSETKRKILRMWWRNSGQTGELEQIEDIQKLTTKKIDRLIERF 624
Query: 519 GGFDLVIGGSPCNNLAGSNRHSR--DGLEGKESSLFYDYFRILDLVKNMMQR 568
GGFD VI SPC +G+ + + D + SLF ++ R+L V+ +QR
Sbjct: 625 GGFDFVICQSPCTCASGNPKMEQRADARSALDFSLFCEFVRVLQRVRTQVQR 676
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 79/164 (48%), Gaps = 24/164 (14%)
Query: 27 TDLILEALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTY 86
+D I + L +A ASSS S + GMGF +V K IQENGE+N D +LE L+
Sbjct: 54 SDFIYSSQLGETA---ASSSASDVRSFLTGMGFLPSLVDKVIQENGEDNVDLLLEILMEC 110
Query: 87 SALGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEE---------K 137
S +S+ Q+S LD F+D D+ E + KEE K
Sbjct: 111 SDPQKSNS--------QSSDSLDTL----FNDKDASNPPEYSKFGQPKEEPDVFGFDDSK 158
Query: 138 LVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAAD 181
SL M +S +E AME+ G + + E+ DFI AAQ+A D
Sbjct: 159 RASLLHMNFSAEEVDFAMEKLGTDAPVDEIVDFITAAQVAANFD 202
>gi|147779004|emb|CAN75753.1| hypothetical protein VITISV_038412 [Vitis vinifera]
Length = 1960
Score = 333 bits (854), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 157/344 (45%), Positives = 230/344 (66%), Gaps = 5/344 (1%)
Query: 228 FGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCA 287
FG+ S + +SL + A PPYF+Y NV W+ IS+FLY +EPEFV++++F A
Sbjct: 1530 FGMSSISKPMPCKSLDQLVAKPPYFFYGNVXNVSHDSWNKISQFLYALEPEFVNTQFFSA 1589
Query: 288 AARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIAS-AKL 346
RK GY+HNLP +NR H++P PP I E +P ++KWWPSWDTR L+C+ + + ++L
Sbjct: 1590 LNRKEGYIHNLPSENRFHILPKPPMTIEEVIPYTKKWWPSWDTRKQLSCISSETSGISQL 1649
Query: 347 TERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNH 406
+R+ K L + G Q+ ++ CR NLVWVG+ KL+P+EP+ +E +LG+P NH
Sbjct: 1650 CDRLGKILVDSRGLLS--FEQQRDILHHCRTLNLVWVGQCKLSPIEPEHLERILGYPLNH 1707
Query: 407 TRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGV 466
TR S +R +SL + FQ+DT+ YHLSVLK M+P G+ +LSLFSGIGGAE+ LH+LG+
Sbjct: 1708 TRVPEYSLIERLQSLRHCFQIDTLGYHLSVLKSMFPKGLTMLSLFSGIGGAELTLHQLGI 1767
Query: 467 RMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIG 526
+K VVSV+ISE RNI++ WW T Q G L+ D+Q+L ++++E +I FGGFD VI
Sbjct: 1768 HLKGVVSVEISETKRNILKKWWHNTGQTGELVQIDDIQKLASSKLESLIEKFGGFDFVIC 1827
Query: 527 GSPCNNLAGSNRHSRDG--LEGKESSLFYDYFRILDLVKNMMQR 568
+PC + +++ DG L G + SLF ++ R+L V++ M+R
Sbjct: 1828 QNPCTYSSRNSKMVADGDSLTGFDFSLFCEFVRVLHRVRSTMER 1871
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 70/156 (44%), Gaps = 37/156 (23%)
Query: 54 FVGMGFSVDMVAKAIQEN-----------------------GEENTDSILETLLTYSALG 90
F+GMGF +V K I+E GE++ D +LETL +AL
Sbjct: 890 FIGMGFLPSLVDKVIEEKVLFFMEFVNVFPKILIKLSSLNPGEDDVDLLLETLCANAALQ 949
Query: 91 QS-SQAEQHINS-----DQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASM 144
+S S++ ++S D N+P F GF + + N D K +L M
Sbjct: 950 KSISESSDSLDSFLNDEDTNNPP---KFSAGFHPKEEPDVSSGVNDD-----KRATLVMM 1001
Query: 145 GYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAA 180
+SV E AM++ G + EL DFI AAQ+A ++
Sbjct: 1002 KFSVDEVEFAMDKLGEGAPVNELVDFIIAAQIAGSS 1037
>gi|162458589|ref|NP_001105094.1| DNA methyl transferase 106 [Zea mays]
gi|22135461|gb|AAM93211.1|AF527610_1 DNA methyltransferase DMT106 [Zea mays]
gi|223949331|gb|ACN28749.1| unknown [Zea mays]
Length = 659
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 209/612 (34%), Positives = 320/612 (52%), Gaps = 57/612 (9%)
Query: 4 HFVGMGFSEEVVAKAIQENGEQNTDLILEALLKHS----ASSSASSSKSKLIDHFVGMGF 59
F+GMGFS ++V K +Q +G+ +++ ILE+LL +S + S +S S D+
Sbjct: 53 QFIGMGFSSKLVDKVLQRHGDDDSNTILESLLSYSDLQQSGSESSDSFGSFFDNDNEENN 112
Query: 60 SVDMVAKAIQENGEENTDS-------ILETL--------LTYSALGQSSQAEQHINSDQN 104
S K I ++ + DS +L T+ L + LG + EQ ++ +
Sbjct: 113 SPSESRKGIYQDIKPELDSFSEKWSFLLRTMNFSQQEVDLAFKQLGDEAPLEQLVDFIVS 172
Query: 105 SPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERCGPNTSI 164
+ G T E T EK +SL MG++ +E S A++ ++
Sbjct: 173 A---QSGVPSGGLQTGDATNEGKTELLYGVMEKTLSLLQMGFTEEEVSSAIDNFDQRATV 229
Query: 165 AELTDFICAAQMAKAADALLAEIEDKPRPKPSNGYHKHK--------------KRRMLDY 210
EL D I A ++A + + ++E + Y ++ R+
Sbjct: 230 QELADSILARRIANSIEQKEIKVESDFLDEAETDYSSYQPSYSDVSYYDDDNNNTRVKRA 289
Query: 211 EKPPIDE----PIRLPNPMIGFGVPSNPDVIVHRSLPEAAAG-----------PPYFYYE 255
+ ID+ L +P D+ V L G PP+F Y
Sbjct: 290 KHIFIDDIGASSSHLGDPWSMGQRAGTNDMSVKVELEAMTPGRRANVQGDLAKPPFFLYG 349
Query: 256 NVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIY 315
NV PK W + +FLY+VEPEFV+S+ F A R+ GY+HNLP++ R +VP P I
Sbjct: 350 NVVEVPKDTWHQLKQFLYNVEPEFVNSQSFSALTRREGYIHNLPVEKRSVVVPKSPMTIE 409
Query: 316 EALPLSRKWWPSWDTRSHLNCLQTCIASAKLT-ERIRKALEECDGEPEPPHHVQKFVMDE 374
EALP +R+WWPSWDTR H++ + T A + T ER+ + E G +Q ++ +
Sbjct: 410 EALPFTRQWWPSWDTRKHISVITTEAAGIEQTCERLGGMVRESRGVLSQARQMQ--IIHQ 467
Query: 375 CRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHL 434
CR NL+WVGR++L PLEP +VE +LG+P NHT +++ DR ++ +FQ DT++Y L
Sbjct: 468 CRVSNLIWVGRDRLGPLEPRQVEKILGYPYNHTNLFELNQPDRLAAMKYAFQTDTLSYLL 527
Query: 435 SVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQK 494
SVLK Y DGI VLS++SGIGGAEVALHRLG+ +K V+SV+ SEVNR I+R WW +T Q
Sbjct: 528 SVLKGKYQDGIRVLSIYSGIGGAEVALHRLGIPLKCVISVEESEVNRKILRRWWLKTEQT 587
Query: 495 GTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYD 554
G L A + +L + IE ++ FGGFDL+IGG+ + G+ ++ G+ +S+ FY+
Sbjct: 588 GVLRQHAGIWKLKTHVIEDLVKEFGGFDLIIGGNYTSCKGGTTVNTTMGM---DSNRFYE 644
Query: 555 YFRILDLVKNMM 566
Y R++ V+ +
Sbjct: 645 YNRVVKRVRTAV 656
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 21/142 (14%)
Query: 44 SSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQ------ 97
SSS KL F+GMGFS +V K +Q +G++++++ILE+LL+YS L QS
Sbjct: 44 SSSSGKLRSQFIGMGFSSKLVDKVLQRHGDDDSNTILESLLSYSDLQQSGSESSDSFGSF 103
Query: 98 --HINSDQNSP--ELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYSVQEASI 153
+ N + NSP G + D + DSF E+ L +M +S QE +
Sbjct: 104 FDNDNEENNSPSESRKGIYQDIKPELDSF-----------SEKWSFLLRTMNFSQQEVDL 152
Query: 154 AMERCGPNTSIAELTDFICAAQ 175
A ++ G + +L DFI +AQ
Sbjct: 153 AFKQLGDEAPLEQLVDFIVSAQ 174
>gi|357134950|ref|XP_003569077.1| PREDICTED: DNA (cytosine-5)-methyltransferase DRM1-like
[Brachypodium distachyon]
Length = 660
Score = 328 bits (841), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 206/635 (32%), Positives = 322/635 (50%), Gaps = 104/635 (16%)
Query: 5 FVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSASS----------------------- 41
F+GMGF +V K +Q++G+++ + ILE+LL HS+ +
Sbjct: 53 FIGMGFPPTLVDKMLQKHGDKDFNAILESLLFHSSLTKSGSESSSSLGSLFDSDSEENIS 112
Query: 42 -----------------SASSSKSKLIDHFVGMGFSVDMVAKAIQENGEEN-TDSILETL 83
S S +S L+ M FS V A + GEE D +++T+
Sbjct: 113 RLGSMKEPHEEIKPEPDSFSERRSYLLS---AMNFSQQEVDWAFNQLGEEAPLDQLVDTI 169
Query: 84 LTYSALGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLAS 143
+T G + E N D + E L G EK + L
Sbjct: 170 VTAQVAGFTGGNE---NVDATT-EGKAESLFGVM------------------EKTLHLLQ 207
Query: 144 MGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPSNGYHK-H 202
MG++ +E S A++ G ++ EL D I A ++ + +IE N + H
Sbjct: 208 MGFTEEEVSGAIDSSGQEATVQELADSIFARRIDNSIKQTEVKIESDFLGGTENQHSTCH 267
Query: 203 KKRRMLDYEKPPI------------------DEPIRLPN--PMIGFGVPSNPDVIVHRSL 242
++ R D E I P P+ P + S + V
Sbjct: 268 QRLRYYDDEDDKIGVKRAKSIFTDNSSGASSSRPGNQPSLTPWLSGCTGSVSNGYVKEEF 327
Query: 243 PEAAAGP-----------PYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARK 291
A+GP PYF Y NV PKG W +S FL++VEPEF++S+YF A R+
Sbjct: 328 DAMASGPRPDVRPEIAKPPYFLYGNVVDIPKGTWHQLSDFLFNVEPEFLNSQYFSAVMRR 387
Query: 292 RGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIAS-AKLTERI 350
GY+HNLP++ RH +VP P I +ALP +R+WWPSWDTR H+ + +A ++ E++
Sbjct: 388 EGYLHNLPMETRHIVVPKSPMTIEDALPFTRQWWPSWDTRKHIGVVTLDVAEIEQMCEKL 447
Query: 351 RKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGG 410
K + + G H Q +M +C+ NL+W+G+++L+PLEP ++E +LG+P+NHT
Sbjct: 448 GKIMTDSRGVLS--HEKQAHIMQQCKMSNLIWIGKDRLSPLEPHQLEHILGYPRNHTEQF 505
Query: 411 GISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKN 470
++ DR ++ +FQ D +AY LSVLK YP+G+ +LS++SG+GGAEVAL RLG+ +K
Sbjct: 506 ELNTPDRLAAMKYTFQTDVLAYLLSVLKSKYPNGLRLLSIYSGLGGAEVALDRLGIPIKC 565
Query: 471 VVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPC 530
+VSV+ S+VNR I+R WW +TNQ G L F + +L +E ++ FGGFDL+IGG+
Sbjct: 566 IVSVEESDVNRKILRKWWRRTNQAGELRQFVGIWKLKTIVLEDLVKEFGGFDLIIGGNYS 625
Query: 531 NNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
+ G ++ G+ +S+ FY+Y R++ +V+ +
Sbjct: 626 SCRGGRTINATMGM---DSNKFYEYARVVKIVRAL 657
>gi|168032180|ref|XP_001768597.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680096|gb|EDQ66535.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 383
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 155/348 (44%), Positives = 228/348 (65%), Gaps = 12/348 (3%)
Query: 226 IGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYF 285
+GFG+P + R L E G P+FY+ENVA P W+ I R L+D+EPEFVDS +F
Sbjct: 38 VGFGLPGT--TVQPRHLDEDVKGAPFFYFENVANMPNDEWERIRRHLFDIEPEFVDSLHF 95
Query: 286 CAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAK 345
A R RGY+HNLPI+ R ++ PP I E LP ++ +WP+WD R+ LNC+ T + S
Sbjct: 96 SACRRPRGYIHNLPIEGRRKILRDPPMTIQELLPHTKSFWPAWDPRTKLNCITTRMGSEF 155
Query: 346 LTERIR----KALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLG 401
L +++ AL+ D P+ Q+ ++ CR WNLVW N P++ E+E +LG
Sbjct: 156 LIKKLHIGEGTALQTTDPSPDQ----QREILHLCRHWNLVWTAPNIPTPIDETEIEAMLG 211
Query: 402 FPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVAL 461
F H+R +S RYK+LGNSF V TVA+H SVLK +YP GI VLSLFSGIGGAEVAL
Sbjct: 212 FDAGHSR-NILSNRSRYKALGNSFSVYTVAFHFSVLKPLYPKGIKVLSLFSGIGGAEVAL 270
Query: 462 HRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTL-IDFADVQQLDANRIEQMINAFGG 520
H++G+++ VVSV+I + R + +WW + Q G L ++ +++ L +I +++N +GG
Sbjct: 271 HKMGMKLLVVVSVEIDDGTRRCLEAWWATSKQTGVLNQNYHNIKDLGRAQISELVNKYGG 330
Query: 521 FDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
FDL++GG+PCNNL+GSN +R GL+G +S++F+++ R++ V+ + R
Sbjct: 331 FDLIVGGTPCNNLSGSNHVTRVGLDGTQSAVFFEFSRVVAAVRELTMR 378
>gi|168056113|ref|XP_001780066.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668469|gb|EDQ55075.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 346
Score = 325 bits (832), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 164/348 (47%), Positives = 227/348 (65%), Gaps = 17/348 (4%)
Query: 226 IGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYF 285
IGFG+P P RSL E G P+FY+ENVA P G WD I L+ +EPEFVDS +F
Sbjct: 1 IGFGLPGQPQK--QRSLQEDVKGAPFFYFENVAGMPVGEWDRIVTHLFGIEPEFVDSMHF 58
Query: 286 CAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAK 345
A R RGY+HNLP++ R ++ PP I E +P + +WP WD R+ LNC+ T K
Sbjct: 59 SACRRSRGYIHNLPLEGRRKIIKDPPMTIQELMPQTVPFWPEWDKRTKLNCINT----VK 114
Query: 346 LTERIRKALEECDGEPEPPHHVQKFVMDE-------CRKWNLVWVGRNKLAPLEPDEVEM 398
TE I + L D P + V++E CRK NLVW + P+E +E+E
Sbjct: 115 GTEFILRKLGIEDATAIPT--AAELVLEEQTKYSYWCRKMNLVWTSPSIPTPIEANEIEA 172
Query: 399 LLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAE 458
+LGF ++HTR ++ + RYK+LGNSF V TVAYH SVLK ++P GI VLSLFSGIGGAE
Sbjct: 173 MLGFDRDHTR-CILNTSIRYKALGNSFSVYTVAYHFSVLKPLFPRGIKVLSLFSGIGGAE 231
Query: 459 VALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTL-IDFADVQQLDANRIEQMINA 517
VALH++G+++ VVSV+I R +++WW TNQ G L +++ DV+ L + + +++N
Sbjct: 232 VALHKIGIKLNVVVSVEIELEPRRCLQTWWSVTNQTGHLDVEYHDVRHLTKSVLTRLVNK 291
Query: 518 FGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
+ GFDL++GGSPCNN AGSNR SR GLEG S++F+++ RI+ V+++
Sbjct: 292 YQGFDLIVGGSPCNNFAGSNRVSRIGLEGGHSTMFFEFSRIVVTVRDL 339
>gi|341868935|gb|AEK98591.1| domain rearranged methyltransferase [Vitis amurensis]
Length = 710
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/378 (43%), Positives = 239/378 (63%), Gaps = 19/378 (5%)
Query: 198 GYHKHKKRRMLDYEKPPIDEPIRLPNPMIG----FGVPSNPDVIVHRSLPEAAAGPPYFY 253
G HK RM P+ P R N + G FG+ S + +SL + A PPYF+
Sbjct: 343 GDHKFSSCRM------PL--PRRDLNQVAGQLNKFGMSSISKPMPCKSLDQLVAKPPYFF 394
Query: 254 YENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQN 313
Y NV+ W+ IS+FLY +EPEFV++++F A RK G HNLP +NR H++P PP
Sbjct: 395 YGNVSNVSHDSWNKISQFLYALEPEFVNTQFFSALNRKEG--HNLPSENRFHILPKPPMT 452
Query: 314 IYEALPLSRKWWPSWDTRSHLNCLQTCIAS-AKLTERIRKALEECDGEPEPPHHVQKFVM 372
I E +P ++KWWPSWDT L+C+ + + ++L +R+ K L D Q+ ++
Sbjct: 453 IEEVIPYTKKWWPSWDTIKQLSCISSETSGISQLCDRLGKIL--VDSRGLLSFEQQRDIL 510
Query: 373 DECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAY 432
CR NLVWVG+ KL+P+EP+ +E +LG+P NHTR S +R +SL + FQ+DT+ Y
Sbjct: 511 HHCRTLNLVWVGQCKLSPIEPEHLERILGYPLNHTRVPEYSLIERLQSLRHCFQIDTLGY 570
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTN 492
HLSVLK M+P G+ +LSLFSGIGGAE+ LH+LG+ +K VVSV+ISE RNI++ WW T
Sbjct: 571 HLSVLKSMFPKGLTMLSLFSGIGGAELTLHQLGIHLKGVVSVEISETKRNILKKWWHNTG 630
Query: 493 QKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDG--LEGKESS 550
Q G L+ D+Q+L ++++E +I FGGFD VI +PC + +++ DG L G + S
Sbjct: 631 QTGELVQIDDIQKLASSKLESLIEKFGGFDFVICQNPCTYSSRNSKMVADGDSLTGFDFS 690
Query: 551 LFYDYFRILDLVKNMMQR 568
LF ++ R+L V++ M+R
Sbjct: 691 LFCEFVRVLHRVRSTMER 708
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 80/151 (52%), Gaps = 14/151 (9%)
Query: 36 KHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQS-SQ 94
+H + ASSS SKL F+GMGF +V K I+E GE+N D +LETL +AL +S S+
Sbjct: 41 RHIGHNGASSSGSKLRSSFIGMGFLPSLVDKVIEEKGEDNVDLLLETLCANAALQKSISE 100
Query: 95 AEQHINS-----DQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYSVQ 149
+ ++S D N+P F GF + + N D K +L M +SV
Sbjct: 101 SSDSLDSFLNDEDTNNPP---KFSAGFHPKEEPDVSSGVNDD-----KRATLVMMKFSVD 152
Query: 150 EASIAMERCGPNTSIAELTDFICAAQMAKAA 180
E AM++ G + EL DFI AAQ+A ++
Sbjct: 153 EVEFAMDKLGEGAPVNELVDFIIAAQIAGSS 183
>gi|302793280|ref|XP_002978405.1| hypothetical protein SELMODRAFT_108655 [Selaginella moellendorffii]
gi|300153754|gb|EFJ20391.1| hypothetical protein SELMODRAFT_108655 [Selaginella moellendorffii]
Length = 336
Score = 318 bits (814), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 166/345 (48%), Positives = 225/345 (65%), Gaps = 12/345 (3%)
Query: 226 IGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYF 285
+GFG+P P R+LP ++ PP+FY+ENVA+ P+G W+ I+RFL +EPE V+SK+F
Sbjct: 1 MGFGIPGQPPR--SRTLPSSSLPPPFFYFENVAIMPRGSWEDITRFLDGIEPELVNSKWF 58
Query: 286 CAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAK 345
CAA+R RGYVHNLP+K R L P P I E +P P WD R LNC+ T S+
Sbjct: 59 CAASRPRGYVHNLPVKGRRALPP-GPMTIQELVPGMENVRPPWDKRVKLNCITT---SSD 114
Query: 346 LTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKN 405
R++ + E + + V V + ++ NLVW GR LAPLE E+E++ GF
Sbjct: 115 RAARVQASAEAFYNDDD----VDPQVFLDMKRANLVWRGRGILAPLEVQELEVVQGFDVG 170
Query: 406 HTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLG 465
HT G S +R K+LGN+ QV TVA+HLSVL ++P GI VLSLFSGIGG EVAL +LG
Sbjct: 171 HTSSGQ-SPAERIKALGNAMQVHTVAWHLSVLAALFPTGIRVLSLFSGIGGIEVALEKLG 229
Query: 466 VRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQM-INAFGGFDLV 524
+ +K +VSV+ + ++RSWW +T Q+GT I DV +L RIE++ A GGFDLV
Sbjct: 230 IPIKFLVSVETNADCHRVLRSWWHRTRQRGTHIVLGDVTELSRERIEELAARAGGGFDLV 289
Query: 525 IGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQRN 569
GGSPCNN +G+NR SR G+ G +S LF+DY RIL V+++M ++
Sbjct: 290 AGGSPCNNFSGNNRTSRTGITGDKSRLFFDYVRILTTVRSIMAKS 334
>gi|449528407|ref|XP_004171196.1| PREDICTED: DNA (cytosine-5)-methyltransferase DRM2-like [Cucumis
sativus]
Length = 644
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 182/522 (34%), Positives = 275/522 (52%), Gaps = 100/522 (19%)
Query: 136 EKLVSLASMGYSVQEASIAMERCGPNTSIAELT--------------------------- 168
EK + L MG+S E S+A+E+ G T ++EL
Sbjct: 132 EKTLRLLEMGFSENEVSLAIEKFGSETQVSELADSIVTGRIASDYPGDVKCSPSSFGIGG 191
Query: 169 -----DFICAAQMAKAADAL--------LAEIEDKPRPK---------PSNGYHKHKKRR 206
D++ + +++ A+ + I+ RPK P+ +KHK +R
Sbjct: 192 LYTPEDYVTKVKAEESSSAVGPLPRNVNIEAIQKGKRPKEENMDDLLNPTTRLNKHKGKR 251
Query: 207 -------------------------MLDYEKPP---------IDEPI-RLPNPMIGFGVP 231
+ ++ PP +D+ + + P P +
Sbjct: 252 PKQEYADDLGSLYGPGWVESKVNPDITSFDIPPSSRLNLSRSLDKLVAKPPCPPLK---- 307
Query: 232 SNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARK 291
SNP R+L + PP+F Y NV + W +S+FLY VEPEFVD++ F A +R
Sbjct: 308 SNPS----RALEKVVTKPPFFLYGNVLDISRDSWAKVSKFLYAVEPEFVDTRSFSALSRT 363
Query: 292 RGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASA-KLTERI 350
GYVHNLP +NR H++PLPP I +A ++KWWPSWDTR +L+C+ + +L +R+
Sbjct: 364 EGYVHNLPCENRFHIIPLPPMTIQDAT-RTKKWWPSWDTRKYLSCINSETRGVPQLCDRL 422
Query: 351 RKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGG 410
K L + G P H ++ ++ C NL+WV + KLAP+EP+++E +LG+P NHT+
Sbjct: 423 TKTLTDSGGHPS--SHQERDILHHCIALNLIWVSQFKLAPVEPEQLECVLGYPVNHTQDA 480
Query: 411 GISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKN 470
S +R + L FQ D + YHLSVLK M+P+G+ VLS+FSGIGGAE+ALHRLG+ +K
Sbjct: 481 ESSSIERLQYLKYCFQTDALGYHLSVLKSMFPEGLVVLSIFSGIGGAEIALHRLGIHLKV 540
Query: 471 VVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPC 530
VVSV+ S R I++ WW + Q G L D+Q+L + +I I +GGFDLVI +PC
Sbjct: 541 VVSVESSAAKRRILKKWWHSSGQTGELEQIEDIQKLTSIKINNWITKYGGFDLVICQNPC 600
Query: 531 NNLAGSNRHSRDG-LEGKES---SLFYDYFRILDLVKNMMQR 568
+ S++ ++ G EG S S+FY++ R+L V+N M R
Sbjct: 601 SRCLSSSKLNQSGDAEGIASFDFSIFYEFVRVLQSVRNTMHR 642
>gi|449441506|ref|XP_004138523.1| PREDICTED: uncharacterized protein LOC101206985 [Cucumis sativus]
Length = 724
Score = 316 bits (809), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 182/522 (34%), Positives = 275/522 (52%), Gaps = 100/522 (19%)
Query: 136 EKLVSLASMGYSVQEASIAMERCGPNTSIAELT--------------------------- 168
EK + L MG+S E S+A+E+ G T ++EL
Sbjct: 212 EKTLRLLEMGFSENEVSLAIEKFGSETQVSELADSIVTGRIASDYPGDVKCSPSSFGIGG 271
Query: 169 -----DFICAAQMAKAADAL--------LAEIEDKPRPK---------PSNGYHKHKKRR 206
D++ + +++ A+ + I+ RPK P+ +KHK +R
Sbjct: 272 LYTREDYVTKVKAEESSSAVGPLPRNVNIEAIQKGKRPKEENMDDLLNPTTRLNKHKGKR 331
Query: 207 -------------------------MLDYEKPP---------IDEPI-RLPNPMIGFGVP 231
+ ++ PP +D+ + + P P +
Sbjct: 332 PKQEYADDLGSLYGPGWVESKVNPDITSFDIPPSSRLNLSRSLDKLVAKPPCPPLK---- 387
Query: 232 SNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARK 291
SNP R+L + PP+F Y NV + W +S+FLY VEPEFVD++ F A +R
Sbjct: 388 SNPS----RALEKVVTKPPFFLYGNVLDISRDSWAKVSKFLYAVEPEFVDTRSFSALSRT 443
Query: 292 RGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASA-KLTERI 350
GYVHNLP +NR H++PLPP I +A ++KWWPSWDTR +L+C+ + +L +R+
Sbjct: 444 EGYVHNLPCENRFHIIPLPPMTIQDAT-RTKKWWPSWDTRKYLSCINSETRGVPQLCDRL 502
Query: 351 RKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGG 410
K L + G P H ++ ++ C NL+WV + KLAP+EP+++E +LG+P NHT+
Sbjct: 503 TKTLTDSGGHPS--SHEERDILHHCIALNLIWVSQFKLAPVEPEQLECVLGYPVNHTQDA 560
Query: 411 GISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKN 470
S +R + L FQ D + YHLSVLK M+P+G+ VLS+FSGIGGAE+ALHRLG+ +K
Sbjct: 561 ESSSIERLQYLKYCFQTDALGYHLSVLKSMFPEGLVVLSIFSGIGGAEIALHRLGIHLKV 620
Query: 471 VVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPC 530
VVSV+ S R I++ WW + Q G L D+Q+L + +I I +GGFDLVI +PC
Sbjct: 621 VVSVESSAAKRRILKKWWHSSGQTGELEQIEDIQKLTSIKINNWITKYGGFDLVICQNPC 680
Query: 531 NNLAGSNRHSRDG-LEGKES---SLFYDYFRILDLVKNMMQR 568
+ S++ ++ G EG S S+FY++ R+L V+N M R
Sbjct: 681 SRCLSSSKLNQSGDAEGIASFDFSIFYEFVRVLQSVRNTMHR 722
>gi|356564666|ref|XP_003550572.1| PREDICTED: DNA (cytosine-5)-methyltransferase DRM1-like [Glycine
max]
Length = 729
Score = 315 bits (808), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 147/330 (44%), Positives = 217/330 (65%), Gaps = 4/330 (1%)
Query: 240 RSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLP 299
R L AA PP+F + NV+ W +S+FLY +EPEF +++ F A R GY+HNLP
Sbjct: 402 RCLSSVAAKPPFFLFGNVSNISYDSWTKMSKFLYGIEPEFANAQSFSALDRIEGYIHNLP 461
Query: 300 IKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQT-CIASAKLTERIRKALEECD 358
++NR H++P PP I +A+PL++KWWP WD+R L+ + A+ +R+ L +
Sbjct: 462 VENRFHILPKPPMTIEDAMPLTKKWWPPWDSRKQLSSIYCETNGIAQTCDRLGNILADSG 521
Query: 359 GEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRY 418
G +QK ++ CR NLVW+G+ KL P+EP+++E++LG+P NHTR + +R
Sbjct: 522 GVLT--SELQKDILRYCRGLNLVWIGKFKLGPVEPEQLELILGYPLNHTRASEGNVAERL 579
Query: 419 KSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE 478
KSL FQ DT+ YHLSVL+ ++P G+ +LSLFSG+GGAE+ALHRLG+++K VVSV+ SE
Sbjct: 580 KSLKYCFQTDTLGYHLSVLRPIFPHGLTMLSLFSGLGGAEIALHRLGIKIKVVVSVETSE 639
Query: 479 VNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNR 538
R I+ WW Q+ Q GTL+ D+Q+L + ++E +I+ FGGFDLVI +PC+NL+ S
Sbjct: 640 TKRKILERWWRQSGQTGTLVQLEDIQKLTSKKLEGLISKFGGFDLVIYQNPCSNLS-SRL 698
Query: 539 HSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
+ GL E S+F + R+L ++ M QR
Sbjct: 699 LAGVGLPALEFSVFCECVRVLQRIRGMYQR 728
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 80/166 (48%), Gaps = 30/166 (18%)
Query: 43 ASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSD 102
ASSS KL F+GMGF +V K I+ENGEEN+D++LE LL YSA + + +
Sbjct: 40 ASSSGGKLRAFFIGMGFLPCLVDKVIEENGEENSDTLLEALLRYSAHKSNCDSFDSLGVS 99
Query: 103 QNSPELDGS---FLDGFSDT-----------------DSFEGEEITNPDPDKEE------ 136
N+ + + DG S D + EI+N + KEE
Sbjct: 100 HNTSRGRSAPNFYPDGHSKEALQKSNSQSSDSLDSLFDDKDPPEISNVNQAKEEPDELSG 159
Query: 137 ----KLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAK 178
K SL M +SV+E +A+ + G SI EL DFI A Q+AK
Sbjct: 160 VIDDKRGSLLMMNFSVEEVELAIHKLGDEASIPELVDFIFAWQIAK 205
>gi|413950055|gb|AFW82704.1| DNA methyltransferase DMT106 [Zea mays]
Length = 460
Score = 312 bits (799), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 173/459 (37%), Positives = 258/459 (56%), Gaps = 35/459 (7%)
Query: 136 EKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKP 195
EK +SL MG++ +E S A++ ++ EL D I A ++A + + ++E +
Sbjct: 2 EKTLSLLQMGFTEEEVSSAIDNFDQRATVQELADSILARRIANSIEQKEIKVESDFLDEA 61
Query: 196 SNGYHKHK--------------KRRMLDYEKPPIDE----PIRLPNPMIGFGVPSNPDVI 237
Y ++ R+ + ID+ L +P D+
Sbjct: 62 ETDYSSYQPSYSDVSYYDDDNNNTRVKRAKHIFIDDIGASSSHLGDPWSMGQRAGTNDMS 121
Query: 238 VHRSLPEAAAG-----------PPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFC 286
V L G PP+F Y NV PK W + +FLY+VEPEFV+S+ F
Sbjct: 122 VKVELEAMTPGRRANVQGDLAKPPFFLYGNVVEVPKDTWHQLKQFLYNVEPEFVNSQSFS 181
Query: 287 AAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKL 346
A R+ GY+HNLP++ R +VP P I EALP +R+WWPSWDTR H++ + T A +
Sbjct: 182 ALTRREGYIHNLPVEKRSVVVPKSPMTIEEALPFTRQWWPSWDTRKHISVITTEAAGIEQ 241
Query: 347 T-ERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKN 405
T ER+ + E G +Q ++ +CR NL+WVGR++L PLEP +VE +LG+P N
Sbjct: 242 TCERLGGMVRESRGVLSQARQMQ--IIHQCRVSNLIWVGRDRLGPLEPRQVEKILGYPYN 299
Query: 406 HTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLG 465
HT +++ DR ++ +FQ DT++Y LSVLK Y DGI VLS++SGIGGAEVALHRLG
Sbjct: 300 HTNLFELNQPDRLAAMKYAFQTDTLSYLLSVLKGKYQDGIRVLSIYSGIGGAEVALHRLG 359
Query: 466 VRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVI 525
+ +K V+SV+ SEVNR I+R WW +T Q G L A + +L + IE ++ FGGFDL+I
Sbjct: 360 IPLKCVISVEESEVNRKILRRWWLKTEQTGVLRQHAGIWKLKTHVIEDLVKEFGGFDLII 419
Query: 526 GGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
GG+ + G+ ++ G+ +S+ FY+Y R++ V+
Sbjct: 420 GGNYTSCKGGTTVNTTMGM---DSNRFYEYNRVVKRVRT 455
>gi|224112050|ref|XP_002316067.1| DNA methyltransferase [Populus trichocarpa]
gi|222865107|gb|EEF02238.1| DNA methyltransferase [Populus trichocarpa]
Length = 609
Score = 309 bits (792), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 204/613 (33%), Positives = 318/613 (51%), Gaps = 65/613 (10%)
Query: 5 FVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSASSSASSSKSKLIDH-FVGMGFS--- 60
F MG+S +V + I+ENGE N DL+LE L++ S +S S +D F G S
Sbjct: 11 FTEMGYSPSLVNRVIEENGEDNVDLLLEILMECSGLQKPNSQSSDSLDCLFDDRGESSPP 70
Query: 61 -------VDMVAKAIQENGEENTDSIL-------ETLLTYSALGQSSQAEQHIN---SDQ 103
V E ++ S+L E L LG+++ + I+ + Q
Sbjct: 71 KYSTVTGVKEEPDVFDEVYDDKRVSLLKMNFPAKEVELAMDKLGENAPINEIIDFIIAAQ 130
Query: 104 NSPELDGSFLDGFSDTDSFEGEEITNPDP-DKEEKLVSLASMGYSVQEASIAMERCGPNT 162
+ LD D D D+ E++ + +K + L +MG+S E S+A++ +
Sbjct: 131 IANNLDRETED-MPDIDAENKEDVNDETLYGTMDKTLCLLNMGFSENEVSLAIDNWVKSE 189
Query: 163 SIAELTDFICAAQMAKAADALLAEIEDKPRPKPSNGYHKHKKR--------------RML 208
+ D I ++ + + +PR + GY + + R +
Sbjct: 190 TEDCRRDAILQSRDMNTKETRKGK---RPRQEHIEGYQEAQPRHDSLEENCAGEQPKQEY 246
Query: 209 DY------EKPPIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPK 262
DY E ++E + + FG+P + L + AA PPYF+Y NVA A
Sbjct: 247 DYGSSSYFEHEWVEEKVN--SDTTTFGMPKPFKCNPCKILDQIAAKPPYFFYGNVATASS 304
Query: 263 GVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSR 322
W IS+FLY +EPEFVD+++F A +R+ GY+HNLP +NR H++P PP + + +P ++
Sbjct: 305 DTWGKISQFLYGIEPEFVDTQFFSALSRREGYIHNLPTENRSHILPKPPITLEDLMPSTK 364
Query: 323 KWWPSWDTRSHLNCLQ-TCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLV 381
KWWPSWD R ++C S++L + + + L++ G Q+ ++ C+ NL+
Sbjct: 365 KWWPSWDARKKMSCRNFDSSGSSQLCDMLGRMLDDSRGLLSAEQ--QRDLLRHCQALNLM 422
Query: 382 WVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMY 441
WVG NKL+PLE +E +LG+P NHT T+R SL SFQ DT+ YHLSVLK ++
Sbjct: 423 WVGPNKLSPLESAHLEKILGYPLNHTLIADYPLTERMYSLRYSFQTDTLGYHLSVLKSIF 482
Query: 442 PDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
P GI VLSLFSGIGGAE+ LHRLG+ +K VVSV+ SE NR +++ WW + Q G L
Sbjct: 483 PQGITVLSLFSGIGGAEITLHRLGIHLKGVVSVETSETNRRVLKRWWYSSGQTGRLEQIE 542
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSR-----DGLEGK---ESSLFY 553
D+++L ++ +E+++ F FD VI C N R S+ GLE + + +LF
Sbjct: 543 DIRKLTSSTVERLVENFVCFDFVI----CQN--SFTRPSKIPGVGSGLESQHFFDFTLFN 596
Query: 554 DYFRILDLVKNMM 566
++ R+L V++ +
Sbjct: 597 EFVRVLQRVRSAI 609
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 79/154 (51%), Gaps = 17/154 (11%)
Query: 44 SSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQ 103
SSS+S L F MG+S +V + I+ENGE+N D +LE L+ S L Q NS Q
Sbjct: 1 SSSRSYLRSFFTEMGYSPSLVNRVIEENGEDNVDLLLEILMECSGL-------QKPNS-Q 52
Query: 104 NSPELDGSFLD-GFSDTDSFEGEEITNPDPD-----KEEKLVSLASMGYSVQEASIAMER 157
+S LD F D G S + +PD ++K VSL M + +E +AM++
Sbjct: 53 SSDSLDCLFDDRGESSPPKYSTVTGVKEEPDVFDEVYDDKRVSLLKMNFPAKEVELAMDK 112
Query: 158 CGPNTSIAELTDFICAAQMAKAADALLAEIEDKP 191
G N I E+ DFI AAQ+A D E ED P
Sbjct: 113 LGENAPINEIIDFIIAAQIANNLD---RETEDMP 143
>gi|356519874|ref|XP_003528594.1| PREDICTED: DNA (cytosine-5)-methyltransferase DRM1-like [Glycine
max]
Length = 702
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 142/327 (43%), Positives = 211/327 (64%), Gaps = 8/327 (2%)
Query: 240 RSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLP 299
R L AA PP+F + NV+ W +S+FLY +EPEF +++ F A R GY+HNLP
Sbjct: 367 RCLSSVAAKPPFFLFGNVSNISYDSWTKMSQFLYGIEPEFANAQSFSAMDRIEGYIHNLP 426
Query: 300 IKNRHHLVPLPPQNIYEALPLSRKWWPSWDTR---SHLNCLQTCIASAKLTERIRKALEE 356
++NR H++P PP I +A+P ++KWWP WD+R S + C IA + +R+ L +
Sbjct: 427 VENRFHILPKPPMTIEDAMPQTKKWWPPWDSRKLLSSIYCETNGIA--QTCDRLGNFLAD 484
Query: 357 CDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTD 416
G QK ++ CR+ NLVW+G+ KL P+EP+++E++LG+P NHTR + +
Sbjct: 485 SGGVLTSEQ--QKDILRYCRRLNLVWIGKFKLGPVEPEQLELILGYPLNHTRATEGNVAE 542
Query: 417 RYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDI 476
R KSL FQ DT+ YHLSVL+ ++P G+ +LSLFSG+GGAE+ALHRL +++K VVSV+
Sbjct: 543 RLKSLKYCFQTDTLGYHLSVLRPIFPHGLTMLSLFSGLGGAEIALHRLAIKIKAVVSVET 602
Query: 477 SEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGS 536
SE R I+ WW Q+ Q GTL+ D+Q+L + ++E +I+ FGGFDLVI +PC + + S
Sbjct: 603 SETKRKILEKWWRQSGQTGTLVQIEDIQKLTSKKLEGLISKFGGFDLVIYQNPC-SYSSS 661
Query: 537 NRHSRDGLEGKESSLFYDYFRILDLVK 563
+ GL + S+F + R+L V+
Sbjct: 662 RLQAGVGLSALDFSVFCECVRVLQRVR 688
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 75/141 (53%), Gaps = 15/141 (10%)
Query: 43 ASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSD 102
ASSS KL F+GMGF +V K I+ENGEEN+D +LE LL YSAL +S+
Sbjct: 40 ASSSGGKLRAFFIGMGFLPCLVDKVIEENGEENSDILLEALLRYSALQKSNS-------- 91
Query: 103 QNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLV-----SLASMGYSVQEASIAMER 157
Q+S LD F D D +PD+ +V SL M +SV+E A+ +
Sbjct: 92 QSSVSLDSLFDD--KDPPEISNVNQAKEEPDELSGVVDDTRGSLLMMNFSVEEVEFAIHK 149
Query: 158 CGPNTSIAELTDFICAAQMAK 178
G SI EL DFI A Q+AK
Sbjct: 150 LGDEASIPELVDFIFALQIAK 170
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 87/205 (42%), Gaps = 50/205 (24%)
Query: 5 FVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSASSSASSSKSKLIDHF---------- 54
F+GMGF +V K I+ENGE+N+D++LEALL++SA ++S S +D
Sbjct: 51 FIGMGFLPCLVDKVIEENGEENSDILLEALLRYSALQKSNSQSSVSLDSLFDDKDPPEIS 110
Query: 55 -----------------------VGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQ 91
+ M FSV+ V AI + G+E + L + + +
Sbjct: 111 NVNQAKEEPDELSGVVDDTRGSLLMMNFSVEEVEFAIHKLGDEASIPELVDFIFALQIAK 170
Query: 92 SSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDP-DKEEKLVSLASMGYSVQE 150
+ E D + T G E+TN K + L MG+S E
Sbjct: 171 KLKKEP----------------DDITFTYYGRGNEVTNEKLFGIMAKTLQLFEMGFSENE 214
Query: 151 ASIAMERCGPNTSIAELTDFICAAQ 175
S A+++ G I+EL +FI A Q
Sbjct: 215 VSSAIDKLGSEAPISELANFIFAEQ 239
>gi|357479111|ref|XP_003609841.1| DNA (cytosine-5)-methyltransferase DRM2 [Medicago truncatula]
gi|355510896|gb|AES92038.1| DNA (cytosine-5)-methyltransferase DRM2 [Medicago truncatula]
Length = 1032
Score = 300 bits (769), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 146/331 (44%), Positives = 206/331 (62%), Gaps = 6/331 (1%)
Query: 240 RSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLP 299
RSL AA PP+F + NV+ W +S+FLY +EPEFV+++ F A R GY+HNLP
Sbjct: 401 RSLSSVAAKPPFFLFGNVSNITYDSWKKMSQFLYCIEPEFVNTELFSALNRIEGYIHNLP 460
Query: 300 IKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASA--KLTERIRKALEEC 357
+NR ++P PP I +A+P ++KWWP WD+R LNC C +L +R+ +AL
Sbjct: 461 TENRFQILPKPPMTIEDAIPRTKKWWPPWDSRKKLNC-NYCETGGITQLCDRLGRALANS 519
Query: 358 DGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDR 417
G QK ++ CR NLVW G+ KL P+EP+ ++ +LG+P NHTR T+R
Sbjct: 520 GGILTSQQ--QKDILRYCRGLNLVWTGKYKLGPIEPEHLDHILGYPLNHTRTDECDLTER 577
Query: 418 YKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDIS 477
+ L +SFQ DT+ YHLSVLK ++P G+ +LS+FSGIGGAEVALHRLG+++K +VSV+ S
Sbjct: 578 LQLLKHSFQTDTLGYHLSVLKPIFPTGVTLLSIFSGIGGAEVALHRLGIKIKALVSVETS 637
Query: 478 EVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSN 537
R I+ WW + Q GTL+ ++Q+L + + E +IN FG FDLVI +PC+
Sbjct: 638 ATKRKILEKWWRSSGQSGTLVQIEEIQKLTSKKFENLINNFGVFDLVIYQNPCSQPI-VR 696
Query: 538 RHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
H GL E S F + RIL V+ + +R
Sbjct: 697 PHQVGGLSAVEFSAFCESVRILQRVRALCER 727
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 82/176 (46%), Gaps = 32/176 (18%)
Query: 33 ALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENG-----EENTDSILETLLTYS 87
AL + ++ASSS SK+ F+GMGF +V K I+ENG EEN+D++LE LL S
Sbjct: 30 ALSRDFRETAASSSGSKVRGFFIGMGFLPGLVDKVIEENGTLCVSEENSDALLEILLRCS 89
Query: 88 ALGQSSQA-EQHINSDQNSP-------------------ELDGSFLDGFSDTDSFEGEEI 127
G SS + E +N++++ E S F D DS E I
Sbjct: 90 TNGDSSDSLEGSLNTNEHRSIPNFFPNAHSKEALQISNLESSDSLDSLFDDKDSPEVSMI 149
Query: 128 TNPDP-------DKEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQM 176
P D E+ +L M +S +E A+ + G + EL DFI AAQ+
Sbjct: 150 NQPKEEVDEIFEDIEDSRGTLLMMNFSAEEVEFAIRKLGNKAPVPELVDFIFAAQI 205
>gi|326532950|dbj|BAJ89320.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 510
Score = 292 bits (747), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 156/468 (33%), Positives = 265/468 (56%), Gaps = 49/468 (10%)
Query: 136 EKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKP 195
+K + L MG++ +E S+A++ G ++ EL D I A ++A + +IE + + +
Sbjct: 49 DKTLHLLQMGFTEEEVSLAIDSFGQEAAVQELADSIFARRIASTIEQKQVKIESEFQGEQ 108
Query: 196 SNGYHKHKKRRMLDY------------------------EKPPIDEPIRLP--NPMIG-- 227
Y + +R L+Y +++P P + G
Sbjct: 109 ETEYSTYHQR--LNYYDDDDDKLRAKRAKHIFRDDRGASSSHAVNQPSFTPWLSGCAGSA 166
Query: 228 ---------FGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPE 278
+ + S P VH L A PP+F Y NV K W +S FL V+PE
Sbjct: 167 GDGYLKEEDYEMTSGPRANVHADL----AKPPFFLYGNVVNITKAAWSELSDFLLSVQPE 222
Query: 279 FVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQ 338
F++S+ F A R+ GY+HNLP + R+ +VP P I +A+P +R +WP+WDTR H+ +
Sbjct: 223 FINSQLFSALMRREGYLHNLPTERRNVVVPKSPMTIEDAVPSTRHYWPTWDTRKHIGNVT 282
Query: 339 TCIASA-KLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVE 397
+ +A +L E + K +++ G Q ++ +C+ NL+W+G+++L PL+P+++E
Sbjct: 283 SEVAGIEQLCETLGKTIKDSRGFLSEEKRAQ--ILHQCKMANLIWIGQDRLGPLQPNQME 340
Query: 398 MLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGA 457
+LG+P NHT ++ DR ++ +FQ DT+AY LSVLK++YP+G+ VLS++SG+GGA
Sbjct: 341 RILGYPPNHTSLFTLNPPDRIAAMKYAFQTDTIAYVLSVLKDIYPNGLRVLSIYSGVGGA 400
Query: 458 EVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINA 517
EVALHRLG+ +K VVS++ S+VNR I++ WW +T Q G L + +L + +E +
Sbjct: 401 EVALHRLGIPLKCVVSIEESDVNRKILKRWWAKTEQSGVLRQLPGIWKLKTDVLEDLFKE 460
Query: 518 FGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
FGGFDLV+GG+ + G+ ++ G++ K+ ++++ R+L+ V++M
Sbjct: 461 FGGFDLVVGGNYDSCRGGTTVNAAMGMDSKK---YFEFVRVLNRVRSM 505
>gi|302773662|ref|XP_002970248.1| hypothetical protein SELMODRAFT_411110 [Selaginella moellendorffii]
gi|300161764|gb|EFJ28378.1| hypothetical protein SELMODRAFT_411110 [Selaginella moellendorffii]
Length = 565
Score = 280 bits (717), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 176/451 (39%), Positives = 252/451 (55%), Gaps = 50/451 (11%)
Query: 141 LASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADA------LLAEIEDKPRPK 194
L SMG+S ++ + A+ G + + ++ + I A + A + + E +++ RP
Sbjct: 141 LKSMGFSDEQIANALGLFGNDAKLEDVVEHIFAKEAAPRLEEKPDLARIYREWDEESRPG 200
Query: 195 PSN---GYHKHKKRRMLDYEKPPIDE----------PIRLPNPMIGFGVPSNPDVIVHRS 241
S+ K++R D D+ R +GFG+P P R+
Sbjct: 201 SSSRRVDTTDGKRKREDDTFFANFDDLEDNFDGFLPEQRNQGDGMGFGIPGQPPR--SRT 258
Query: 242 LPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIK 301
LP ++ PP+FY+ENVA+ P+G W+ DS + + RGYVHNLP+K
Sbjct: 259 LPSSSLPPPFFYFENVAVMPRGSWE--------------DSTA-SSQSSPRGYVHNLPVK 303
Query: 302 NRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEEC--DG 359
R L P P I E +P P WD R LNC+ T S+ R++ + E D
Sbjct: 304 GRRALHP-GPMTIQELVPGMENVRPPWDKRVKLNCITT---SSDRAARVQASAEAFYNDD 359
Query: 360 EPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYK 419
+ +P Q F+ + ++ NLVW GR LAPLE E+E++ GF HT G S +R K
Sbjct: 360 DVDP----QVFL--DMKRANLVWRGRGILAPLEVQELEVVQGFDVGHT-SSGQSPAERIK 412
Query: 420 SLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV 479
+LGN+ QV TVA+HLSVL E++P GI VLSLFSGIGG EVAL +LG+ +K +VSV+ S
Sbjct: 413 ALGNAMQVHTVAWHLSVLGELFPSGIRVLSLFSGIGGIEVALEKLGIPIKFLVSVETSAD 472
Query: 480 NRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQM-INAFGGFDLVIGGSPCNNLAGSNR 538
++RSWW +T Q+GT I DV +L RIE++ A GGFDLV GGSPCNN +G+NR
Sbjct: 473 CHRVLRSWWHRTRQRGTHIVLGDVTELSRERIEELAARAGGGFDLVAGGSPCNNFSGNNR 532
Query: 539 HSRDGLEGKESSLFYDYFRILDLVKNMMQRN 569
SR G+ G +S LF+DY RIL V+++M ++
Sbjct: 533 TSRTGITGDKSRLFFDYVRILTTVRSIMAKS 563
>gi|15292897|gb|AAK92819.1| unknown protein [Arabidopsis thaliana]
Length = 710
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/332 (40%), Positives = 192/332 (57%), Gaps = 6/332 (1%)
Query: 238 VHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHN 297
+ +SL A PYF+Y + W IS FL+ + PE VD++ A R GY+HN
Sbjct: 382 LSQSLGPKVARRPYFFYGQLGELSPSWWSKISGFLFGIHPEHVDTRLCSALRRTEGYLHN 441
Query: 298 LPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIA---SAKLTERIRKAL 354
LP NR + +P P I +A+P R WWP WD R H N TC + L ERI + +
Sbjct: 442 LPTVNRFNTLPNPRLTIQDAMPHMRSWWPQWDIRKHFNS-GTCSNMKDATLLCERIGRRI 500
Query: 355 EECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISR 414
EC G+P Q ++ C NL+W+ N L+PLEP+ +E ++G+P NHT GG
Sbjct: 501 AECKGKPT--QQDQTLILRHCHTSNLIWIAPNILSPLEPEHLECIMGYPMNHTNIGGGRL 558
Query: 415 TDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSV 474
+R K FQ DT+ YHLSVLK M+P G+ VLSLFSGIGGAE+AL RLG+ +K VVSV
Sbjct: 559 AERLKLFDYCFQTDTLGYHLSVLKSMFPQGLTVLSLFSGIGGAEIALDRLGIHLKGVVSV 618
Query: 475 DISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLA 534
+ ++RNI++ WW+ + Q G L+ +++ L A R+E ++ FGGFD VI +P L
Sbjct: 619 ESCGLSRNILKRWWQTSGQTGELVQIEEIKSLTAKRLETLMQRFGGFDFVICQNPSTPLD 678
Query: 535 GSNRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
S S + +LF ++ R+ V++MM
Sbjct: 679 LSKEISNSEACEFDYTLFNEFARVTKRVRDMM 710
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 34/146 (23%)
Query: 37 HSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAE 96
++ASSS S+ KS LI+ MGF +V KAI E+G+++ + +LE L +S++ E
Sbjct: 47 NAASSSGSNVKSLLIE----MGFCPTLVQKAIDESGQDDFELLLEILT------KSTETE 96
Query: 97 QHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKL----VSLASMGYSVQEAS 152
SF G P+PD E + ++L +M +
Sbjct: 97 --------------------PPGPSFHGLMEPKPEPDIEYETDRIRIALLTMKFPENLVD 136
Query: 153 IAMERCGPNTSIAELTDFICAAQMAK 178
A++R G +T I E+ DFI AAQ+A+
Sbjct: 137 FALDRLGKDTPIDEMVDFIVAAQLAE 162
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 5 FVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSASSSASSSKSKLID------------ 52
+ MGF +V KAI E+G+ + +L+LE L K + + S L++
Sbjct: 60 LIEMGFCPTLVQKAIDESGQDDFELLLEILTKSTETEPPGPSFHGLMEPKPEPDIEYETD 119
Query: 53 ----HFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSPEL 108
+ M F ++V A+ G+ D+ ++ ++ + Q AE++ ++S L
Sbjct: 120 RIRIALLTMKFPENLVDFALDRLGK---DTPIDEMVDFIVAAQ--LAEKYAEESEDS--L 172
Query: 109 DGSFLDGFSDTD----SFEGEEITNPDP-DKEEKLVSLASMGYSVQEASIAMERCGPNTS 163
DG+ ++ D D + G E+ N + +K + L MG+S E S+A+E+ G
Sbjct: 173 DGAEINE-EDEDVTPVTARGPEVPNEQLFETMDKTLRLLEMGFSNDEISMAIEKIGTKGQ 231
Query: 164 IAELTDFICAAQMAKAADALLAEIEDK 190
I+ L + I + L +IE K
Sbjct: 232 ISVLAESIVTGEFPAECHDDLEDIEKK 258
>gi|11994548|dbj|BAB02735.1| unnamed protein product [Arabidopsis thaliana]
Length = 751
Score = 276 bits (705), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/332 (40%), Positives = 192/332 (57%), Gaps = 6/332 (1%)
Query: 238 VHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHN 297
+ +SL A PYF+Y + W IS FL+ + PE VD++ A R GY+HN
Sbjct: 423 LSQSLGPKVARRPYFFYGQLGELSPSWWSKISGFLFGIHPEHVDTRLCSALRRTEGYLHN 482
Query: 298 LPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIA---SAKLTERIRKAL 354
LP NR + +P P I +A+P R WWP WD R H N TC + L ERI + +
Sbjct: 483 LPTVNRFNTLPNPRLTIQDAMPHMRSWWPQWDIRKHFNS-GTCSNMKDATLLCERIGRRI 541
Query: 355 EECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISR 414
EC G+P Q ++ C NL+W+ N L+PLEP+ +E ++G+P NHT GG
Sbjct: 542 AECKGKPT--QQDQTLILRHCHTSNLIWIAPNILSPLEPEHLECIMGYPMNHTNIGGGRL 599
Query: 415 TDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSV 474
+R K FQ DT+ YHLSVLK M+P G+ VLSLFSGIGGAE+AL RLG+ +K VVSV
Sbjct: 600 AERLKLFDYCFQTDTLGYHLSVLKSMFPQGLTVLSLFSGIGGAEIALDRLGIHLKGVVSV 659
Query: 475 DISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLA 534
+ ++RNI++ WW+ + Q G L+ +++ L A R+E ++ FGGFD VI +P L
Sbjct: 660 ESCGLSRNILKRWWQTSGQTGELVQIEEIKSLTAKRLETLMQRFGGFDFVICQNPSTPLD 719
Query: 535 GSNRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
S S + +LF ++ R+ V++MM
Sbjct: 720 LSKEISNSEACEFDYTLFNEFARVTKRVRDMM 751
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 34/146 (23%)
Query: 37 HSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAE 96
++ASSS S+ KS LI+ MGF +V KAI ENG+++ + +LE L +S++ E
Sbjct: 73 NAASSSGSNVKSLLIE----MGFCPTLVQKAIDENGQDDFELLLEILT------KSTETE 122
Query: 97 QHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKL----VSLASMGYSVQEAS 152
SF G P+PD E + ++L +M +
Sbjct: 123 --------------------PPGPSFHGLMEPKPEPDIEYETDRIRIALLTMKFPENLVD 162
Query: 153 IAMERCGPNTSIAELTDFICAAQMAK 178
A++R G +T I E+ DFI AAQ+A+
Sbjct: 163 FALDRLGKDTPIDEMVDFIVAAQLAE 188
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 31/203 (15%)
Query: 5 FVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSASSSASSSKSKLID------------ 52
+ MGF +V KAI ENG+ + +L+LE L K + + S L++
Sbjct: 86 LIEMGFCPTLVQKAIDENGQDDFELLLEILTKSTETEPPGPSFHGLMEPKPEPDIEYETD 145
Query: 53 ----HFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSPEL 108
+ M F ++V A+ G+ D+ ++ ++ + Q AE++ ++S L
Sbjct: 146 RIRIALLTMKFPENLVDFALDRLGK---DTPIDEMVDFIVAAQ--LAEKYAEESEDS--L 198
Query: 109 DGSFLDGFSDTD----SFEGEEITNPDP-DKEEKLVSLASMGYSVQEASIAMERCGPNTS 163
DG+ ++ D D + G E+ N + +K + L MG+S E S+A+E+
Sbjct: 199 DGAEINE-EDEDVTPVTARGPEVPNEQLFETMDKTLRLLEMGFSNDEISMAIEKIA--RP 255
Query: 164 IAELTDFICAAQMAKAADALLAE 186
+ + + C + K ++LAE
Sbjct: 256 VVLVYNLFCTSSGTKGQISVLAE 278
>gi|18401465|ref|NP_566573.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
gi|30684462|ref|NP_850603.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
gi|23297499|gb|AAN12982.1| unknown protein [Arabidopsis thaliana]
gi|222422929|dbj|BAH19451.1| AT3G17310 [Arabidopsis thaliana]
gi|332642414|gb|AEE75935.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
gi|332642415|gb|AEE75936.1| S-adenosyl-L-methionine-dependent methyltransferase-like protein
[Arabidopsis thaliana]
Length = 710
Score = 275 bits (704), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 136/332 (40%), Positives = 192/332 (57%), Gaps = 6/332 (1%)
Query: 238 VHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHN 297
+ +SL A PYF+Y + W IS FL+ + PE VD++ A R GY+HN
Sbjct: 382 LSQSLGPKVARRPYFFYGQLGELSPSWWSKISGFLFGIHPEHVDTRLCSALRRTEGYLHN 441
Query: 298 LPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIA---SAKLTERIRKAL 354
LP NR + +P P I +A+P R WWP WD R H N TC + L ERI + +
Sbjct: 442 LPTVNRFNTLPNPRLTIQDAMPHMRSWWPQWDIRKHFNS-GTCSNMKDATLLCERIGRRI 500
Query: 355 EECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISR 414
EC G+P Q ++ C NL+W+ N L+PLEP+ +E ++G+P NHT GG
Sbjct: 501 AECKGKPT--QQDQTLILRHCHTSNLIWIAPNILSPLEPEHLECIMGYPMNHTNIGGGRL 558
Query: 415 TDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSV 474
+R K FQ DT+ YHLSVLK M+P G+ VLSLFSGIGGAE+AL RLG+ +K VVSV
Sbjct: 559 AERLKLFDYCFQTDTLGYHLSVLKSMFPQGLTVLSLFSGIGGAEIALDRLGIHLKGVVSV 618
Query: 475 DISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLA 534
+ ++RNI++ WW+ + Q G L+ +++ L A R+E ++ FGGFD VI +P L
Sbjct: 619 ESCGLSRNILKRWWQTSGQTGELVQIEEIKSLTAKRLETLMQRFGGFDFVICQNPSTPLD 678
Query: 535 GSNRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
S S + +LF ++ R+ V++MM
Sbjct: 679 LSKEISNSEACEFDYTLFNEFARVTKRVRDMM 710
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 71/146 (48%), Gaps = 34/146 (23%)
Query: 37 HSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAE 96
++ASSS S+ KS LI+ MGF +V KAI ENG+++ + +LE L +S++ E
Sbjct: 47 NAASSSGSNVKSLLIE----MGFCPTLVQKAIDENGQDDFELLLEILT------KSTETE 96
Query: 97 QHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKL----VSLASMGYSVQEAS 152
SF G P+PD E + ++L +M +
Sbjct: 97 --------------------PPGPSFHGLMEPKPEPDIEYETDRIRIALLTMKFPENLVD 136
Query: 153 IAMERCGPNTSIAELTDFICAAQMAK 178
A++R G +T I E+ DFI AAQ+A+
Sbjct: 137 FALDRLGKDTPIDEMVDFIVAAQLAE 162
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 5 FVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSASSSASSSKSKLID------------ 52
+ MGF +V KAI ENG+ + +L+LE L K + + S L++
Sbjct: 60 LIEMGFCPTLVQKAIDENGQDDFELLLEILTKSTETEPPGPSFHGLMEPKPEPDIEYETD 119
Query: 53 ----HFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSPEL 108
+ M F ++V A+ G+ D+ ++ ++ + Q AE++ ++S L
Sbjct: 120 RIRIALLTMKFPENLVDFALDRLGK---DTPIDEMVDFIVAAQ--LAEKYAEESEDS--L 172
Query: 109 DGSFLDGFSDTD----SFEGEEITNPDP-DKEEKLVSLASMGYSVQEASIAMERCGPNTS 163
DG+ ++ D D + G E+ N + +K + L MG+S E S+A+E+ G
Sbjct: 173 DGAEINE-EDEDVTPVTARGPEVPNEQLFETMDKTLRLLEMGFSNDEISMAIEKIGTKGQ 231
Query: 164 IAELTDFICAAQMAKAADALLAEIEDK 190
I+ L + I + L +IE K
Sbjct: 232 ISVLAESIVTGEFPAECHDDLEDIEKK 258
>gi|297834636|ref|XP_002885200.1| methyltransferase family protein [Arabidopsis lyrata subsp. lyrata]
gi|297331040|gb|EFH61459.1| methyltransferase family protein [Arabidopsis lyrata subsp. lyrata]
Length = 743
Score = 272 bits (696), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/333 (39%), Positives = 193/333 (57%), Gaps = 6/333 (1%)
Query: 238 VHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHN 297
+ +SL A PYF+Y + W IS FL+ + PE VD++ A R GY+HN
Sbjct: 412 LSQSLGPNVAKRPYFFYGQLGELSPSWWSKISGFLFGIHPEHVDTRLCSALHRTEGYLHN 471
Query: 298 LPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLT---ERIRKAL 354
LP NR +++P P I +A+P + WWP WD R H N TC +T ERI + +
Sbjct: 472 LPTVNRFNILPKPRLTIQDAMPQMKSWWPQWDIRKHFNS-GTCSNRKDVTLLCERIGRRI 530
Query: 355 EECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISR 414
EC G+P Q ++ C NL+W+ N L+P+EP+ +E ++G+P NHT GG
Sbjct: 531 AECRGKPT--QQDQTLILRHCHTSNLIWIAPNILSPVEPEHLECIMGYPTNHTNIGGGRL 588
Query: 415 TDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSV 474
+R K FQ DT+ YH SVLK M+P+G+ VLSLFSGIGGAE+AL RLG+ +K VVSV
Sbjct: 589 AERLKLFDYCFQTDTLGYHFSVLKSMFPEGLTVLSLFSGIGGAEIALDRLGIHLKGVVSV 648
Query: 475 DISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLA 534
+ ++RNI++ WW+ + Q G L+ +++ L ++E ++ FGGFD VI +P L
Sbjct: 649 ESCGLSRNILKRWWQTSGQTGELVQIEEIKSLTTKKLETLVQRFGGFDFVICQNPSTPLD 708
Query: 535 GSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQ 567
S S + +LF ++ R+ V++MM+
Sbjct: 709 LSKEISNSEACEFDYTLFNEFARVTKRVRDMME 741
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 67/146 (45%), Gaps = 34/146 (23%)
Query: 37 HSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAE 96
++ASSS S+ KS LI+ MGF +V KAI ENGE++ + +LE L + Q
Sbjct: 77 NAASSSGSNVKSLLIE----MGFCPTLVQKAIDENGEDDIEFLLEILTKSTVTEQPGT-- 130
Query: 97 QHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEE----KLVSLASMGYSVQEAS 152
SF G P+PD E + ++L +M +
Sbjct: 131 ------------------------SFHGLMEPKPEPDIEYETDGRRIALLTMQFPENLVD 166
Query: 153 IAMERCGPNTSIAELTDFICAAQMAK 178
A++R G + I E+ DFI AAQ+A+
Sbjct: 167 FALDRLGKDAPIDEMVDFIVAAQLAE 192
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 5 FVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSASSSASSSKSKLID------------ 52
+ MGF +V KAI ENGE + + +LE L K + + +S L++
Sbjct: 90 LIEMGFCPTLVQKAIDENGEDDIEFLLEILTKSTVTEQPGTSFHGLMEPKPEPDIEYETD 149
Query: 53 ----HFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSPEL 108
+ M F ++V A+ G+ D+ ++ ++ + Q AE++ ++S L
Sbjct: 150 GRRIALLTMQFPENLVDFALDRLGK---DAPIDEMVDFIVAAQ--LAEKYAEESEDS--L 202
Query: 109 DGSFLDGFSDTD----SFEGEEITNPDP-DKEEKLVSLASMGYSVQEASIAMERCGPNTS 163
DG+ ++ D D + G E+ N + +K + L MG+S E S+A+E+ G
Sbjct: 203 DGAEINE-EDEDVTPVTARGPEVPNEQLFETMDKTLHLLEMGFSNDEISMAIEKIGTEGQ 261
Query: 164 IAELTDFICAAQMAKAADALLAEIEDK 190
I+ L + I + L +IE K
Sbjct: 262 ISVLAESIVTGEFPAVCHDDLEDIEKK 288
>gi|218185097|gb|EEC67524.1| hypothetical protein OsI_34820 [Oryza sativa Indica Group]
gi|222615374|gb|EEE51506.1| hypothetical protein OsJ_32669 [Oryza sativa Japonica Group]
Length = 477
Score = 257 bits (657), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 153/362 (42%), Positives = 205/362 (56%), Gaps = 51/362 (14%)
Query: 33 ALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQS 92
+L + + S+ S L+ +F+GMGFS +MV +AI+E G+ +++ ILE LLTY A+G
Sbjct: 8 GILMDANGKANGSAPSALVAYFLGMGFSREMVFRAIKEIGDTDSEQILELLLTYQAIGSD 67
Query: 93 SQAEQHINSDQNSPELDGSF------------LDGFSDTDSFEG---EEITNPDPDKEEK 137
+S + L+ +D F +G E+ +K+EK
Sbjct: 68 PSVGNSSHSACDPQILEEEDEEEDVNWDEDDTVDNFDRATYSDGSGDEDFLQEMSEKDEK 127
Query: 138 LVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIED-KPRPK-- 194
+ SL SMG+ P E + F + K D + E + RP+
Sbjct: 128 IKSLVSMGF-------------PEDEDTEFSSF-GGRKKTKLIDGSKKKRERYRSRPQWN 173
Query: 195 --PSNGYHKHKKRRMLDYEKPPIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYF 252
P +G H +EP+ LPN M+GF +P++ VHR+LP+ A GPP+F
Sbjct: 174 QVPFDGSH---------------EEPMPLPNSMVGFSLPNDGLRSVHRNLPDQALGPPFF 218
Query: 253 YYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQ 312
YYENVALAPKGVW TISRFLYD+ PEFV SKYFCAAARKRGY+HNLPIKNR ++P+PP+
Sbjct: 219 YYENVALAPKGVWTTISRFLYDIYPEFVYSKYFCAAARKRGYIHNLPIKNRSPVLPIPPK 278
Query: 313 NIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVM 372
I EA P ++ WWP WD R NCLQTC+ASAK TERIR AL G+ PP VQK V+
Sbjct: 279 TISEAFPSTKMWWPFWDPRRQFNCLQTCVASAKHTERIRCALGRF-GDALPP-AVQKSVL 336
Query: 373 DE 374
+E
Sbjct: 337 EE 338
Score = 209 bits (533), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/140 (71%), Positives = 118/140 (84%), Gaps = 1/140 (0%)
Query: 427 VDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRS 486
++ AYHLSVL++++P+G+NVLSLFSGIGGAEVALHRLG+ MK VV V+ISEVN ++RS
Sbjct: 336 LEEFAYHLSVLRDIFPNGMNVLSLFSGIGGAEVALHRLGICMKTVVLVEISEVNMTLLRS 395
Query: 487 WWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEG 546
WW+QT Q GTLI+ ADVQ L A RIE I FGGFDLVIGGSPCNNLAGSNR+ RDGLEG
Sbjct: 396 WWDQT-QTGTLIEIADVQNLTAERIELFIRRFGGFDLVIGGSPCNNLAGSNRYHRDGLEG 454
Query: 547 KESSLFYDYFRILDLVKNMM 566
K S+LFY Y+RILD VK +M
Sbjct: 455 KHSALFYHYYRILDSVKTIM 474
>gi|224137126|ref|XP_002327031.1| DNA methyltransferase [Populus trichocarpa]
gi|222835346|gb|EEE73781.1| DNA methyltransferase [Populus trichocarpa]
Length = 245
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/310 (46%), Positives = 175/310 (56%), Gaps = 80/310 (25%)
Query: 258 ALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEA 317
A APKGVW T+SRFL V Y+HN R +P P +I EA
Sbjct: 14 AFAPKGVWSTMSRFLKGV------------------YIHN-----RFPSLPRQPLSIQEA 50
Query: 318 LPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRK 377
LP + KWWPSWD R+ LNCL T I SAKL ERI+ LE
Sbjct: 51 LPSTSKWWPSWDPRTKLNCLVTVIGSAKLIERIKLRLE---------------------- 88
Query: 378 WNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGG-ISRTDRYKSLGNSFQVDTVAYHLSV 436
R+K+ HTRGGG +S T+RYK LGNSFQ+ + +
Sbjct: 89 -------RSKIHWY--------------HTRGGGGVSITERYKVLGNSFQMSFIMGLMC- 126
Query: 437 LKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGT 496
SLFSGIGGAEVALHRLG+ +KNVVSV+IS R+++R+WWEQ NQKG
Sbjct: 127 ------------SLFSGIGGAEVALHRLGIPLKNVVSVEISVSKRDVIRNWWEQANQKGN 174
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
LI+ D+Q ++ + IE I +FGGFDLVIGGSPCNNLAG NR SRD LEG+ SLF Y
Sbjct: 175 LIEITDIQTINGSDIETWIRSFGGFDLVIGGSPCNNLAGGNRVSRDRLEGQHCSLFNQYV 234
Query: 557 RILDLVKNMM 566
R+L LV+NMM
Sbjct: 235 RVLGLVRNMM 244
>gi|297727887|ref|NP_001176307.1| Os11g0109200 [Oryza sativa Japonica Group]
gi|77548342|gb|ABA91139.1| hypothetical protein LOC_Os11g01810 [Oryza sativa Japonica Group]
gi|255679702|dbj|BAH95035.1| Os11g0109200 [Oryza sativa Japonica Group]
Length = 473
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/163 (73%), Positives = 140/163 (85%), Gaps = 3/163 (1%)
Query: 404 KNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHR 463
+N+TRG +SRT RY++LGNSFQVDTVAYHLSVL++++P+G+NVLSLFSGIGGAEVALHR
Sbjct: 269 RNYTRG--VSRTARYRALGNSFQVDTVAYHLSVLRDIFPNGMNVLSLFSGIGGAEVALHR 326
Query: 464 LGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDL 523
LG+ MK VV V+ISEVN ++RSWW+QT Q GTLI+ ADVQ L A RIE I FGGFDL
Sbjct: 327 LGICMKTVVLVEISEVNMTLLRSWWDQT-QTGTLIEIADVQNLTAERIELFIRRFGGFDL 385
Query: 524 VIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
VIGGSPCNNLAGSNR+ RDGLEGK S+LFY Y+RILD VK +M
Sbjct: 386 VIGGSPCNNLAGSNRYHRDGLEGKHSALFYHYYRILDSVKTIM 428
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 118/306 (38%), Positives = 163/306 (53%), Gaps = 49/306 (16%)
Query: 33 ALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQS 92
+L + + S+ S L+ +F+GMGFS +MV +AI+E G+ +++ ILE LLTY A+G
Sbjct: 8 GILMDANGKANGSAPSALVAYFLGMGFSREMVFRAIKEIGDTDSEQILELLLTYQAIGSD 67
Query: 93 SQAEQHINSDQNSPELDGSF------------LDGFSDTDSFEG---EEITNPDPDKEEK 137
+S + L+ +D F +G E+ +K+EK
Sbjct: 68 PSVGNSSHSACDPQILEEEDEEEDVNWDEDDTVDNFDRATYSDGSGDEDFLQEMSEKDEK 127
Query: 138 LVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIED-KPRPK-- 194
+ SL SMG+ P E + F + K D + E + RP+
Sbjct: 128 IKSLVSMGF-------------PEDEDTEFSSF-GGRKKTKLIDGSKKKRERYRSRPQWN 173
Query: 195 --PSNGYHKHKKRRMLDYEKPPIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYF 252
P +G H +EP+ LPN M+GF +P++ VHR+LP+ A GPP+F
Sbjct: 174 QVPFDGSH---------------EEPMPLPNSMVGFSLPNDGLRSVHRNLPDQALGPPFF 218
Query: 253 YYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQ 312
YYENVALAPKGVW TISRFLYD+ PEFV SKYFCAAARKRGY+HNLPIKNR++ +
Sbjct: 219 YYENVALAPKGVWTTISRFLYDIYPEFVYSKYFCAAARKRGYIHNLPIKNRNYTRGVSRT 278
Query: 313 NIYEAL 318
Y AL
Sbjct: 279 ARYRAL 284
>gi|283379280|dbj|BAI66066.1| DNA metyltransferase [Oryza sativa Japonica Group]
Length = 189
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 117/164 (71%), Positives = 138/164 (84%), Gaps = 5/164 (3%)
Query: 399 LLGF--PKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGG 456
++GF P + RG +SRT RY++LGNSFQVDTVAYHLSVL++++P+G+NVLSLFSGIGG
Sbjct: 28 MVGFSLPNDGLRG--VSRTARYRALGNSFQVDTVAYHLSVLRDIFPNGMNVLSLFSGIGG 85
Query: 457 AEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMIN 516
AEVALHRLG+ MK VV V+ISEVN ++RSWW+QT Q GTLI+ ADVQ L A RIE I
Sbjct: 86 AEVALHRLGICMKTVVLVEISEVNMTLLRSWWDQT-QTGTLIEIADVQNLTAERIELFIR 144
Query: 517 AFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
FGGFDLVIGGSPCNNLAGSNR+ RDGLEGK S+LFY Y+RILD
Sbjct: 145 RFGGFDLVIGGSPCNNLAGSNRYHRDGLEGKHSALFYHYYRILD 188
>gi|222630097|gb|EEE62229.1| hypothetical protein OsJ_17016 [Oryza sativa Japonica Group]
Length = 551
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/251 (43%), Positives = 165/251 (65%), Gaps = 10/251 (3%)
Query: 321 SRKWWPSWDTRSHLNCLQTCIASA-KLTERIRKALEECDG--EPEPPHHVQKFVMDECRK 377
S + WPSWDTR LN + T +A +L ER+ K + + G E H+ M +C+
Sbjct: 290 SNECWPSWDTRKQLNSVATEVAGIEQLCERLGKMVRDSGGYLSQEKKTHI----MHQCKL 345
Query: 378 WNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVL 437
NL+WVG ++L+PL+P +VE +LG+P+ HT G++ DR +++ SFQ DT+ Y LSVL
Sbjct: 346 ANLIWVGPDRLSPLDPQQVERILGYPRKHTNLFGLNPQDRIEAMRYSFQTDTLGYLLSVL 405
Query: 438 KEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTL 497
K++YPDG+ VLS++SGIGGA +ALHRLG+ ++ VVSVD S+ NR I+R WW T QKG L
Sbjct: 406 KDLYPDGLRVLSIYSGIGGAAIALHRLGIPLQCVVSVDQSDTNRKILRRWWSNTEQKGQL 465
Query: 498 IDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
+ +L N +E ++ FGGFD++IGG+ + G+ +S G+ +S+ F++Y R
Sbjct: 466 RQINTIWKLKINVLEDLVKEFGGFDIIIGGNFSSCKGGTTVNSSMGM---DSNQFFEYVR 522
Query: 558 ILDLVKNMMQR 568
++ VK++M R
Sbjct: 523 VVQRVKHIMGR 533
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 26/163 (15%)
Query: 30 ILEALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSAL 89
+L A +K SSS S + F+GMGFS +V + +Q++G+ ++D+ILE LL+ SAL
Sbjct: 133 LLRATVKEEVEGQPSSSSSHVRSQFIGMGFSPMLVDRVLQKHGDRDSDTILEALLSQSAL 192
Query: 90 GQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNP------------DPDKEEK 137
Q S GS D F D+D+ E P D E++
Sbjct: 193 -------------QKSGSESGSLGDLF-DSDNEENSSHFAPRKEVIQDIKVEADSSSEKR 238
Query: 138 LVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAA 180
L++M +S +E +A+ + G S+ +L DFI Q++ +
Sbjct: 239 SYLLSTMNFSQREVDLALNQLGEEASLEQLVDFIVTGQVSGCS 281
>gi|414881396|tpg|DAA58527.1| TPA: hypothetical protein ZEAMMB73_831685 [Zea mays]
Length = 362
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 112/200 (56%), Positives = 137/200 (68%), Gaps = 33/200 (16%)
Query: 342 ASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLG 401
AS+ L E I AL + E P VQK+V+ +CRKWNLVWVGR+++APLEPDE+E LLG
Sbjct: 47 ASSALIEHILDALA--NSEDPPSATVQKYVLGQCRKWNLVWVGRHRVAPLEPDEIEFLLG 104
Query: 402 FPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVAL 461
FPK+HTRG I+ T+RY+SLGNSFQV TVAYHLSVL+EM+P+G+NVLSLFS IGGA++AL
Sbjct: 105 FPKDHTRG--INSTERYRSLGNSFQVHTVAYHLSVLREMFPNGMNVLSLFSEIGGAKIAL 162
Query: 462 HRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGF 521
H+LG+RMK +VSV+ +I W E T I GG
Sbjct: 163 HKLGIRMKTMVSVE------SITSDWLEST-----------------------IKEIGGL 193
Query: 522 DLVIGGSPCNNLAGSNRHSR 541
DLVIGGSPCNN GSNR+ R
Sbjct: 194 DLVIGGSPCNNFTGSNRYHR 213
>gi|169977326|emb|CAQ18910.1| domains rearranged methyltransferase [Nicotiana sylvestris]
Length = 126
Score = 206 bits (525), Expect = 2e-50, Method: Composition-based stats.
Identities = 97/124 (78%), Positives = 110/124 (88%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
NVLSLFSGIGG EVAL+RLG+ + VVSV+ SEVNR+IVRSWWEQTNQKG LI F DVQQ
Sbjct: 1 NVLSLFSGIGGGEVALYRLGIPLNTVVSVEKSEVNRDIVRSWWEQTNQKGNLIHFNDVQQ 60
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
L+ +R+EQ+I +FGGFDLVIGGSPCNNLA SNR SRDGLEGKESSLFYDY RILDLVK++
Sbjct: 61 LNGDRLEQLIESFGGFDLVIGGSPCNNLACSNRVSRDGLEGKESSLFYDYVRILDLVKSI 120
Query: 566 MQRN 569
M R+
Sbjct: 121 MSRH 124
>gi|68655490|emb|CAJ01712.1| putative cytosine methyltransferase [Hordeum vulgare subsp.
vulgare]
Length = 149
Score = 186 bits (471), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 120/167 (71%), Gaps = 19/167 (11%)
Query: 402 FPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVAL 461
FP++HTRG + +T+RY+SL NSFQVDT+AYHLSVL++M+P+GINVLSL +GIGG VAL
Sbjct: 1 FPRDHTRG--VVKTERYRSLANSFQVDTIAYHLSVLRDMFPNGINVLSLSTGIGGGAVAL 58
Query: 462 HRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGF 521
HRLG+RM+ VSV+ E+NR I WW+QT Q G L++ AD++ L +RI ++ +GGF
Sbjct: 59 HRLGIRMRTAVSVEKGEINRRIFNGWWDQT-QTGKLVEIADMKSLTNDRIASLVGRYGGF 117
Query: 522 DLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
DLVIGGSP ++S+L YDY RILD +K++M R
Sbjct: 118 DLVIGGSPS----------------EQSALLYDYPRILDAIKSVMAR 148
>gi|169977320|emb|CAQ18907.1| domains rearranged methyltransferase [Nicotiana sylvestris]
gi|169977322|emb|CAQ18908.1| domains rearranged methyltransferase [Nicotiana sylvestris]
gi|169977324|emb|CAQ18909.1| domains rearranged methyltransferase [Nicotiana sylvestris]
Length = 110
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/107 (77%), Positives = 95/107 (88%)
Query: 462 HRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGF 521
+RLG+ + VVSV+ SEVNR+IVRSWWEQTNQKG LI F DVQQL+ +R+EQ+I +FGGF
Sbjct: 1 YRLGIPLNTVVSVEKSEVNRDIVRSWWEQTNQKGNLIHFNDVQQLNGDRLEQLIESFGGF 60
Query: 522 DLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
DLVIGGSPCNNLAGSNR SRDGLEGKESSLFYDY RILDLVK++M R
Sbjct: 61 DLVIGGSPCNNLAGSNRVSRDGLEGKESSLFYDYVRILDLVKSIMSR 107
>gi|161621506|gb|ABX75257.1| cytosine-5-methyltransferase [Malus x domestica]
Length = 107
Score = 175 bits (444), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/107 (76%), Positives = 95/107 (88%)
Query: 424 SFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNI 483
SFQVDTVAYHLS LK+MYP+GINVLSLF+GIGGAEVALHRLGV +KNV+SV+ISEVNRN+
Sbjct: 1 SFQVDTVAYHLSALKDMYPNGINVLSLFTGIGGAEVALHRLGVPLKNVISVEISEVNRNV 60
Query: 484 VRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPC 530
V SWWEQTNQ+G L DVQQL+ + +EQ ++ FGGFDLVIGGSPC
Sbjct: 61 VSSWWEQTNQRGRLQHVDDVQQLNGDHLEQYMSEFGGFDLVIGGSPC 107
>gi|297736778|emb|CBI25979.3| unnamed protein product [Vitis vinifera]
Length = 460
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 126/424 (29%), Positives = 182/424 (42%), Gaps = 110/424 (25%)
Query: 5 FVGMGFSEEVVAKAIQENGEQNTDLILEALLKHSASSSASSSKSKLIDHF---------- 54
F+GMGF +V K I+E GE + DL+LE L ++A + S S +D F
Sbjct: 37 FIGMGFLPSLVDKVIEEKGEDDVDLLLETLCANAALQKSISESSDSLDSFLNDEDTNNPP 96
Query: 55 --------------------------VGMGFSVDMVAKAIQENGEENTDSILETLLTYSA 88
V M FSVD V A+ + GE + L + +
Sbjct: 97 KFSAGFHPKEEPDVSSGVNDDKRATLVMMKFSVDEVEFAMDKLGEGAPVNELVDFIIAAQ 156
Query: 89 LGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKE------EKLVSLA 142
+ SS+ D + P G E D + E +K + L
Sbjct: 157 IAGSSKM------DADDPTY---------------GNEERKEDCNNEALFGTMDKTLRLL 195
Query: 143 SMGYSVQEASIAMERCGPNTSIAELTDFICAAQMA---KAADALL--------------- 184
MG+S E S A+E+ G I+EL D I A Q+A K + A
Sbjct: 196 EMGFSENEISSAIEKFGSEVPISELADSIFAGQIAEKDKHSSATFRLNHSHTGNDYRSFG 255
Query: 185 AEIEDKPRPKPSNGY-----------------------HKHK--KRRMLD----YEKPPI 215
+ED + + S + HK K K+ LD Y P
Sbjct: 256 KGMEDGLKRRSSGTFMVKTEEYSPEAVSQLRAVDIGDDHKGKRPKQESLDDSSAYIGPTW 315
Query: 216 DEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDV 275
E ++ + FG+ S + +SL + A PPYF+Y NV W+ IS+FLY +
Sbjct: 316 LEGRKVAGQLNKFGMSSISKPMPCKSLDQLVAKPPYFFYGNVTNVSHDSWNKISQFLYAL 375
Query: 276 EPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLN 335
EPEFV++++F A RK GY+HNLP +NR H++P PP I E +P ++KWWPSWDTR L+
Sbjct: 376 EPEFVNTQFFSALNRKEGYIHNLPSENRFHILPKPPMTIEEVIPYTKKWWPSWDTRKQLS 435
Query: 336 CLQT 339
C+ +
Sbjct: 436 CISS 439
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 80/151 (52%), Gaps = 14/151 (9%)
Query: 36 KHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSALGQS-SQ 94
+H + ASSS SKL F+GMGF +V K I+E GE++ D +LETL +AL +S S+
Sbjct: 19 RHIGHNGASSSGSKLRSSFIGMGFLPSLVDKVIEEKGEDDVDLLLETLCANAALQKSISE 78
Query: 95 AEQHINS-----DQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLASMGYSVQ 149
+ ++S D N+P F GF + + N D K +L M +SV
Sbjct: 79 SSDSLDSFLNDEDTNNPP---KFSAGFHPKEEPDVSSGVNDD-----KRATLVMMKFSVD 130
Query: 150 EASIAMERCGPNTSIAELTDFICAAQMAKAA 180
E AM++ G + EL DFI AAQ+A ++
Sbjct: 131 EVEFAMDKLGEGAPVNELVDFIIAAQIAGSS 161
>gi|341868921|gb|AEK98584.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 95
Score = 157 bits (397), Expect = 1e-35, Method: Composition-based stats.
Identities = 74/97 (76%), Positives = 84/97 (86%), Gaps = 2/97 (2%)
Query: 281 DSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTC 340
DSKYFCA ARKRGY+HNLPI+NR L+PLPP IYEALPL+RKWWPSWDTR+ LNC+QTC
Sbjct: 1 DSKYFCATARKRGYIHNLPIQNRFPLLPLPPLTIYEALPLTRKWWPSWDTRTKLNCIQTC 60
Query: 341 IASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRK 377
+ SAKLT+RIRKALEE DG PP VQK+V+DECRK
Sbjct: 61 VGSAKLTDRIRKALEEWDG--VPPMSVQKYVLDECRK 95
>gi|444302583|gb|AGD99090.1| domains rearranged methyltransferase 2, partial [Quercus suber]
Length = 73
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 60/72 (83%), Positives = 69/72 (95%)
Query: 468 MKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGG 527
+KNVVSV+ISEVNRNIVRSWWEQTNQKG LID ADVQQL+ +R+EQ++N+FGGFDLV+GG
Sbjct: 2 LKNVVSVEISEVNRNIVRSWWEQTNQKGNLIDLADVQQLNGDRLEQLMNSFGGFDLVVGG 61
Query: 528 SPCNNLAGSNRH 539
SPCNNLAGSNRH
Sbjct: 62 SPCNNLAGSNRH 73
>gi|7671506|emb|CAB89347.1| putative protein [Arabidopsis thaliana]
Length = 255
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 117/184 (63%), Gaps = 8/184 (4%)
Query: 5 FVGMGFSEEVVAKAIQENGEQNTD--LILEALLKHSASSSASSSKSKLIDHFVGMGFSVD 62
FV MGFS +++A+AI+E N + +ILE L +SAS+ ASSSKSK+I+HF+ MGF +
Sbjct: 66 FVEMGFSTQMIARAIEETAGANMEPMMILETLFNYSASTEASSSKSKVINHFIAMGFPEE 125
Query: 63 MVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSF 122
V KA+QE+G+E+ I LLTY+ + + ++E D N D + +S +
Sbjct: 126 HVIKAMQEHGDEDVGEITNALLTYAEVDKLRESE-----DMNININDDDDDNLYSLSSDD 180
Query: 123 EGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADA 182
E +E+ N +++ L +L MGY ++A+IA+ERCG + S+ E+ DFICAAQMA+ D
Sbjct: 181 EEDELNNS-SNEDRILQALIKMGYLREDAAIAIERCGEDASMEEVVDFICAAQMARQFDE 239
Query: 183 LLAE 186
+ AE
Sbjct: 240 IYAE 243
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 1 MIDHFVGMGFSEEVVAKAIQENGEQNTDLILEALLKHS 38
+I+HF+ MGF EE V KA+QE+G+++ I ALL ++
Sbjct: 113 VINHFIAMGFPEEHVIKAMQEHGDEDVGEITNALLTYA 150
>gi|297723955|ref|NP_001174341.1| Os05g0313900 [Oryza sativa Japonica Group]
gi|255676233|dbj|BAH93069.1| Os05g0313900 [Oryza sativa Japonica Group]
Length = 1070
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 2/65 (3%)
Query: 263 GVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSR 322
GVW TISRFL+D++PEFV S FCAAARK Y+HNLPI+NR ++PLPP I EA +
Sbjct: 983 GVWTTISRFLFDIQPEFVGS--FCAAARKMDYIHNLPIENRSPVLPLPPNTISEAFLPTN 1040
Query: 323 KWWPS 327
WWPS
Sbjct: 1041 MWWPS 1045
>gi|7573312|emb|CAB87630.1| putative protein [Arabidopsis thaliana]
Length = 229
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 91/157 (57%), Gaps = 13/157 (8%)
Query: 8 MGFSEEVVAKAIQENGEQ-NTDLILEALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAK 66
MGF E++++AI+E G T +I++ + K+S+ A SSKSK IDHF+ MGF + V K
Sbjct: 71 MGFPVEMISRAIKETGPNVETSVIIDTISKYSSDCEAGSSKSKAIDHFLAMGFDEEKVVK 130
Query: 67 AIQENGEENTDSILETLLTY-SALGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGE 125
AIQE+GE+N ++I LL+ A + E+ D +S + D ++ D + D
Sbjct: 131 AIQEHGEDNMEAIANALLSCPEAKKLPAAVEEEDGIDWSSSDDDTNYTDMLNSDDE---- 186
Query: 126 EITNPDPDKEE---KLVSLASMGYSVQEASIAMERCG 159
DP+ E K+ SL MG+S EAS+A+ERCG
Sbjct: 187 ----KDPNSNENGSKIRSLVKMGFSELEASLAVERCG 219
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 25/34 (73%)
Query: 2 IDHFVGMGFSEEVVAKAIQENGEQNTDLILEALL 35
IDHF+ MGF EE V KAIQE+GE N + I ALL
Sbjct: 115 IDHFLAMGFDEEKVVKAIQEHGEDNMEAIANALL 148
>gi|341868923|gb|AEK98585.1| domain rearranged methyltransferase 1 [Vitis amurensis]
Length = 97
Score = 87.4 bits (215), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 55/80 (68%), Gaps = 1/80 (1%)
Query: 281 DSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTC 340
++++F A RK GY+HNLP +NR H++P PP I E +P ++KWWPSWDTR L+C+ +
Sbjct: 1 NTQFFSALNRKEGYIHNLPSENRFHILPKPPMTIEEVIPYTKKWWPSWDTRKQLSCISSE 60
Query: 341 IAS-AKLTERIRKALEECDG 359
+ ++L +R+ K L + G
Sbjct: 61 TSGISQLCDRLGKILVDSRG 80
>gi|302773608|ref|XP_002970221.1| hypothetical protein SELMODRAFT_411052 [Selaginella moellendorffii]
gi|300161737|gb|EFJ28351.1| hypothetical protein SELMODRAFT_411052 [Selaginella moellendorffii]
Length = 459
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 98/203 (48%), Gaps = 32/203 (15%)
Query: 329 DTRSHLNCLQTCIASAKLTERIRKALEEC--DGEPEPPHHVQKFVMDECRKWNLVWVGRN 386
D R LNC+ T S+ R++ + E D + +P Q F+ + ++ NLVW GR
Sbjct: 283 DKRVKLNCITT---SSDRAARVQASAEAFYNDDDVDP----QVFL--DMKRANLVWRGRG 333
Query: 387 KLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGIN 446
LAPLE E+E++ GF HT G S +R K+LGN+ QV TVA+HLS L YP +
Sbjct: 334 ILAPLEVQELEVVQGFDVGHT-SSGQSPAERIKALGNAMQVHTVAWHLS-LPNRYPGPLA 391
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
+L GG A R N +V RN Q T I DV +L
Sbjct: 392 LLGDRRHRGGVGEA------RYSN-------QVPRN-----QRGLPQAATHIVLGDVTEL 433
Query: 507 DANRIEQM-INAFGGFDLVIGGS 528
RIE++ A GGFDL G S
Sbjct: 434 SRERIEELAARAGGGFDLSRGSS 456
>gi|348517108|ref|XP_003446077.1| PREDICTED: hypothetical protein LOC100692348 [Oreochromis niloticus]
Length = 1526
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VLSLF GIG L LG+++ ++ ++ E + + N G ++ DV+
Sbjct: 1215 VRVLSLFDGIGTGFYVLKVLGIKIDKYIASEVCEDSVAVA-----TINHDGKIVHIGDVR 1269
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ R+EQ +G FDL+IGGSPCN+L+ N R GL LF+DY+RIL +K
Sbjct: 1270 HITQERLEQ----WGPFDLLIGGSPCNDLSIVN-PLRKGLYEGTGRLFFDYYRILQWLK 1323
>gi|198422315|ref|XP_002126359.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha [Ciona
intestinalis]
Length = 678
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 13/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI VAL +LG++++ V+ +I E +V+ N+ ++ D+
Sbjct: 386 IRVLSLFDGIATGVVALKQLGLQIQKFVASEIDEAAIRLVQ------NRHPEVMHVGDIT 439
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS--LFYDYFRIL 559
+L + I + +G FDLV+GGSPCN+L+G+N R GL +E + LF+D+FR+L
Sbjct: 440 KLTDDDITR----YGPFDLVMGGSPCNDLSGANPR-RKGLLDQEGTGCLFFDFFRVL 491
>gi|410898996|ref|XP_003962983.1| PREDICTED: uncharacterized protein LOC101065802 [Takifugu rubripes]
Length = 2114
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GIG V L LG +++ V+ ++ E + + N +G + DV+
Sbjct: 1135 IRVLSLFDGIGTGYVVLKDLGFKVETYVASEVCEDSIAVT-----AVNHEGKITQVGDVR 1189
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ +E+ +G FDL+IGGSPCN+L+ N R GL LF++Y+RIL+L+K
Sbjct: 1190 FITQEHLER----WGPFDLLIGGSPCNDLSIVN-PIRKGLYEGTGRLFFEYYRILELLK 1243
>gi|190337984|gb|AAI62467.1| DNA (cytosine-5-)-methyltransferase 3 [Danio rerio]
Length = 1448
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG +++ V+ +I E + I N G + DV+
Sbjct: 1164 IRVLSLFDGIATGYLVLRDLGFKVEKYVASEIDEESITI-----SMVNHDGKITQVDDVK 1218
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IEQ +G FDL+IGGSPCN+L+ N +R GL LF++Y+R+L+++K
Sbjct: 1219 NITKKHIEQ----WGPFDLLIGGSPCNDLSIVN-PARKGLYEGTGRLFFEYYRLLNVLK 1272
>gi|62719324|ref|NP_571461.1| DNA (cytosine-5-)-methyltransferase 3 [Danio rerio]
gi|62433259|dbj|BAD95477.1| DNA methyltransferase [Danio rerio]
Length = 1448
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG +++ V+ +I E + I N G + DV+
Sbjct: 1164 IRVLSLFDGIATGYLVLRDLGFKVEKYVASEIDEESITI-----SMVNHDGKITQVDDVK 1218
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IEQ +G FDL+IGGSPCN+L+ N +R GL LF++Y+R+L+++K
Sbjct: 1219 NITKKHIEQ----WGPFDLLIGGSPCNDLSIVN-PARKGLYEGTGRLFFEYYRLLNVLK 1272
>gi|4894862|gb|AAD32631.1|AF135438_1 de novo DNA methyltransferase 3 [Danio rerio]
Length = 842
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG +++ V+ +I E + I N G + DV+
Sbjct: 558 IRVLSLFDGIATGYLVLRDLGFKVEKYVASEIDEESITI-----SMVNHDGKITQVDDVK 612
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ +EQ +G FDL+IGGSPCN+L+ N +R GL LF++Y+R+L+++K
Sbjct: 613 NITKKHMEQ----WGPFDLLIGGSPCNDLSIVN-PARKGLYEGTGRLFFEYYRLLNVLK 666
>gi|432960286|ref|XP_004086448.1| PREDICTED: uncharacterized protein LOC101168440 [Oryzias latipes]
Length = 1481
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 67/119 (56%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VLSLF GIG + L LG +++ V+ ++ E + + N G ++ DV+
Sbjct: 1163 VRVLSLFDGIGTGYLVLKDLGFKVEKYVASEVCEDSITV-----SAVNHDGKILQIGDVR 1217
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ ++ + A+G FDL+IGGSPCN+L+ N R GL LF++++RIL L+K
Sbjct: 1218 FI----TKEFMEAWGPFDLLIGGSPCNDLSIVN-PVRKGLYEGTGRLFFEFYRILQLLK 1271
>gi|66392184|ref|NP_001018150.1| DNA (cytosine-5)-methyltransferase 3A [Danio rerio]
gi|62433265|dbj|BAD95480.1| DNA methyltransferase [Danio rerio]
Length = 731
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 67/117 (57%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG++++ V+ ++ E + IVR +G ++ D
Sbjct: 451 IRVLSLFDGIATGLLVLRELGIQVERYVASEVCEDSITVGIVR-------HQGRIMYVGD 503
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+QL I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 504 VRQLTRKNIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 555
>gi|66472742|ref|NP_001018315.1| DNA methyltransferase dnmt5 [Danio rerio]
gi|62433263|dbj|BAD95479.1| DNA methyltransferase [Danio rerio]
Length = 1297
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VLSLF GI + L LG +++ V+ ++ E + I N +G + DV+
Sbjct: 1013 VRVLSLFDGIATGYLVLRDLGFKVEKYVASEVDEESVTI-----SMVNHEGKITYVDDVK 1067
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ I++ +G FDL+IGGSPCN+L N R GL LF++Y+R+L+++K
Sbjct: 1068 KITRKHIDK----WGPFDLLIGGSPCNDLCTVN-PGRKGLFEGSGRLFFEYYRLLNVLK 1121
>gi|348510619|ref|XP_003442842.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Oreochromis
niloticus]
Length = 934
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ V+ ++ E + IVR +G ++ D
Sbjct: 656 IRVLSLFDGIATGLLVLKELGIQVGRYVASEVCEDSITVGIVR-------HEGRIMYVGD 708
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ N + IN +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 709 VR----NITRKHINEWGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 760
>gi|190338655|gb|AAI62582.1| Dnmt6 protein [Danio rerio]
Length = 728
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 17/117 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG++++ V+ ++ E + IVR +G ++ D
Sbjct: 451 IRVLSLFDGIATGLLVLRELGIQVERYVASEVCEDSITVGIVR-------HQGRIMYVGD 503
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+QL I++ +G FDLVIGGSPCN+L+ N ++G LF++++R+L
Sbjct: 504 VRQLTRKNIQE----WGPFDLVIGGSPCNDLSIVNPARKEG----TGRLFFEFYRLL 552
>gi|390341362|ref|XP_787412.3| PREDICTED: uncharacterized protein LOC582367 [Strongylocentrotus
purpuratus]
Length = 1462
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 76/153 (49%), Gaps = 19/153 (12%)
Query: 414 RTDRYKSLGNSFQVDTVA-------YHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGV 466
R D + L + F D VA Y +L P I VLSLF G+G + L LG
Sbjct: 1142 RDDWQEQLVDFFNRDQVADFEPLRMYKPLLLSNRRP--IRVLSLFDGLGTGMLVLRELGF 1199
Query: 467 RMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIG 526
++ + ++SE + KG + DVQ++ ++ ++G FD++IG
Sbjct: 1200 DVECYYASEVSEEAITVA-----AVRLKGQIQQIGDVQKITPKELK----SWGPFDILIG 1250
Query: 527 GSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
GSPCN+L+ N +R GL G LF++++RIL
Sbjct: 1251 GSPCNDLSIVN-PARKGLAGGTGLLFFEFYRIL 1282
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 40/197 (20%)
Query: 250 PYFY-YENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLV- 307
P+F+ +ENV + I RFL P +DS++ R R Y NLP +R ++
Sbjct: 1294 PFFWLFENVVFMGRKDKLNICRFL-QCNPVMIDSRHMSPTHRARYYWGNLPGMHRPYVAG 1352
Query: 308 ---PLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPP 364
PL Q E P D ++ + + T ++ + + A+
Sbjct: 1353 ADNPLCLQECLE---------PHCDRQAQFSKVGTITTTSHSIRQTKDAI---------- 1393
Query: 365 HHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNS 424
L + + L E+E L GFP ++T G +SRT R K LG +
Sbjct: 1394 ---------------LPVIMNGREDGLWSTELERLFGFPDHYTDVGNLSRTARQKLLGKA 1438
Query: 425 FQVDTVAYHLSVLKEMY 441
+ V + + ++ LK+ +
Sbjct: 1439 WSVPVIRHLMAPLKDYF 1455
>gi|405116967|gb|AFR91944.1| DNA cytosine-5-methyltransferase 3 [Patiria pectinifera]
Length = 670
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ LSLF GIG + L LGV++ + +ISE + G + DV+
Sbjct: 384 VRALSLFDGIGTGMLVLKELGVKVDCYYASEISEEAMQV-----SSVRHDGVIQQLNDVR 438
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ EQ I + G FDL+IGGSPCN+L+ +N +R GL LF++++R+L V+
Sbjct: 439 GI----TEQEIKSLGPFDLLIGGSPCNDLSIAN-PARKGLFEGTGVLFFEFYRLLTAVR 492
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 91/205 (44%), Gaps = 42/205 (20%)
Query: 243 PEAAAGPPYFY-YENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIK 301
PEA + P+F+ +ENV P ISRFL +P VD+K A R R ++ NLP
Sbjct: 493 PEADSQRPFFWLFENVVGMPHKHKMDISRFL-QCDPVVVDAKDVSPAHRARYFLGNLPGM 551
Query: 302 NRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIA-----SAKLTERIRKALEE 356
NR P+ T + CLQ C+ A+ + ++R +
Sbjct: 552 NR----------------------PNVATDHNALCLQDCLEPNCNRQAQFS-KVRTVTSK 588
Query: 357 CDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTD 416
+ + V +M+ + + +W E+E + GFP+++T +SR+
Sbjct: 589 LNSIKQRSEQVLPVLMNG--QEDALWC----------TEMERIFGFPEHYTDIANMSRSS 636
Query: 417 RYKSLGNSFQVDTVAYHLSVLKEMY 441
R+K +G ++ V + + L+ LKE +
Sbjct: 637 RHKLIGQAWSVPVIKHLLAPLKEYF 661
>gi|410916995|ref|XP_003971972.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Takifugu
rubripes]
Length = 867
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+R+ V+ ++ E + +VR G ++ D
Sbjct: 589 IRVLSLFDGIATGLLVLKDLGIRVDKYVASEVCEDSITVGMVR-------HHGRIMYVGD 641
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 642 VRNVTRKHIEE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 693
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 42/210 (20%)
Query: 237 IVHRSLPEAAAGPPYFY-YENVALAPKGVWDT--ISRFLYDVEPEFVDSKYFCAAARKRG 293
++H + P+ P+F+ +ENV GV D ISRFL + P +D+K AA R R
Sbjct: 692 LLHEARPKLGDERPFFWLFENVVAM--GVSDKRDISRFL-ESNPVMIDAKEVSAAHRARY 748
Query: 294 YVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLT--ERIR 351
+ NLP +R PL P T L+ LQ C+ ++ E++R
Sbjct: 749 FWGNLPGMSR----PLSPM-----------------TNDRLD-LQECLEHGRVAKFEKLR 786
Query: 352 KALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGG 411
+ + MD K +++W E+E + GFP ++T
Sbjct: 787 TITTRSNSVKQGKDEHFPVFMDS--KEDILWC----------TEMERVFGFPVHYTDVSN 834
Query: 412 ISRTDRYKSLGNSFQVDTVAYHLSVLKEMY 441
+SR R + LG S+ V + + + LKE +
Sbjct: 835 MSRLARQRLLGRSWSVPVIRHLFAPLKEYF 864
>gi|219119343|ref|XP_002180434.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407907|gb|EEC47842.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 699
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
G+ VL +F+GIG A V L RLG+++ +V V+ ++ ++ + + TL D D+
Sbjct: 241 GLTVLDMFAGIGTATVCLKRLGLQISKIVRVEHDHISTHVYQE-NHDCSYNPTLADHGDI 299
Query: 504 QQLDANR-------IEQMINAFGGFDLVIGGSPCNNLAGSN--RHSRDGLEGKESSLFYD 554
+ + + +E M G FDLVIGG PC + + N R +G++G+ + F
Sbjct: 300 KHVYCQKFEDFRDNLEHMAETHGPFDLVIGGPPCVDYSAVNARRQGAEGVQGRYTIEFGH 359
Query: 555 YFRILDLVKN 564
R L+ ++N
Sbjct: 360 LIRKLERLQN 369
>gi|432947191|ref|XP_004083937.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Oryzias
latipes]
Length = 804
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ V+ ++ E + IVR +G ++ D
Sbjct: 526 IRVLSLFDGIATGLLVLKDLGIQVDKYVASEVCEDSITVGIVR-------HQGRIMYVGD 578
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 579 VRNVTRRHIEE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 630
>gi|345488444|ref|XP_001599223.2| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Nasonia
vitripennis]
Length = 1095
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 12/121 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GIG V L L V ++ + +I + + S++ N+ +I DV+
Sbjct: 824 IRVLSLFDGIGTGLVVLKHLNVNIECYYASEIDPDSMQV--SFFNHGNE---IIQLGDVR 878
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS--LFYDYFRILDLV 562
+D +I+++ DL+IGGSPCN L+ +N R GL+ E + LFYDY RI+ LV
Sbjct: 879 NIDEKKIKEI----APIDLLIGGSPCNELSLANPKRR-GLDDPEGTGILFYDYVRIMKLV 933
Query: 563 K 563
K
Sbjct: 934 K 934
>gi|392397796|ref|YP_006434397.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
gi|390528874|gb|AFM04604.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
Length = 328
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 15/115 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF GI A +AL + G+ + N + +I + + + + T I D++
Sbjct: 1 MNILSLFDGISCARIALEKAGIEVNNYYASEIDKYAIQVAKKNFPST------IHLGDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+D + + ++ DL+IGGSPC +L+ + + GL+G++SSLFY+Y R+L
Sbjct: 55 NIDVSDLPKI-------DLLIGGSPCQDLSQAQKGL--GLQGEKSSLFYEYIRLL 100
>gi|410897655|ref|XP_003962314.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Takifugu
rubripes]
Length = 937
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 64/117 (54%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+ + V+ ++ E + IVR +G ++ D
Sbjct: 659 IRVLSLFDGIATGLLVLKELGIEVDRYVASEVCEDSITLGIVR-------HQGRIMYVGD 711
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 712 VRSVTRKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 763
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 42/210 (20%)
Query: 237 IVHRSLPEAAAGPPYFY-YENVALAPKGVWDT--ISRFLYDVEPEFVDSKYFCAAARKRG 293
++H + P+ P+F+ +ENV GV D ISRFL + P +D+K AA R R
Sbjct: 762 LLHEARPKEGDDRPFFWLFENVVAM--GVSDKRDISRFL-ECNPVMIDAKEVSAAHRARY 818
Query: 294 YVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLT--ERIR 351
+ NLP NR PLS T + LQ C+ + E++R
Sbjct: 819 FWGNLPGMNR---------------PLS-------STNTDKLDLQECLEHGRTAKFEKVR 856
Query: 352 KALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGG 411
+ + M+E K +++W E+E + GFP ++T
Sbjct: 857 TITTRSNSIKQGKDQHFPVYMNE--KEDILWC----------TEIERIFGFPVHYTDVSN 904
Query: 412 ISRTDRYKSLGNSFQVDTVAYHLSVLKEMY 441
+SR R + LG S+ V + + + LKE +
Sbjct: 905 MSRLARQRLLGRSWSVPVIRHLFAPLKEYF 934
>gi|426226271|ref|XP_004007272.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Ovis aries]
Length = 1104
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 826 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 878
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 879 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 930
>gi|67514593|ref|NP_001020003.1| DNA (cytosine-5)-methyltransferase 3A [Gallus gallus]
gi|82227308|sp|Q4W5Z4.1|DNM3A_CHICK RecName: Full=DNA (cytosine-5)-methyltransferase 3A; Short=Dnmt3a
gi|66766324|dbj|BAD99023.1| DNA methyltransferase 3A [Gallus gallus]
Length = 877
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 599 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 651
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ N ++ I +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 652 VR----NVTQKHIQEWGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 703
>gi|326935591|ref|XP_003213853.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like, partial
[Meleagris gallopavo]
Length = 698
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 420 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 472
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ N ++ I +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 473 VR----NVTQKHIQEWGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 524
>gi|395507060|ref|XP_003757846.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Sarcophilus
harrisii]
Length = 913
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 635 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 687
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ N ++ I +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 688 VR----NVTQKHIQEWGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 739
>gi|327287014|ref|XP_003228224.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Anolis
carolinensis]
gi|289657686|gb|ADD14584.1| DNA methyltransferase 3A [Anolis carolinensis]
Length = 689
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 411 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 463
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ N ++ I +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 464 VR----NVTQKHIQEWGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 515
>gi|301626439|ref|XP_002942400.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Xenopus
(Silurana) tropicalis]
Length = 937
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+ ++ ++ ++ E + +VR +G ++ D
Sbjct: 659 IRVLSLFDGIATGLLVLKDLGIHIERYIASEVCEDSITVGMVR-------HQGKIMYVGD 711
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 712 VRNITRKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLFEGTGRLFFEFYRLL 763
>gi|348574247|ref|XP_003472902.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
3A-like [Cavia porcellus]
Length = 969
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 691 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 743
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 744 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 795
>gi|291387188|ref|XP_002710120.1| PREDICTED: DNA cytosine methyltransferase 3 alpha [Oryctolagus
cuniculus]
Length = 940
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 662 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 714
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + ++ I +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 715 VRSV----TQKHIQEWGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 766
>gi|334312425|ref|XP_001380132.2| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Monodelphis
domestica]
Length = 1154
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 876 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 928
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ N ++ I +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 929 VR----NVTQKHIQEWGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 980
>gi|444524132|gb|ELV13759.1| DNA (cytosine-5)-methyltransferase 3A [Tupaia chinensis]
Length = 1277
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 999 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 1051
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 1052 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 1103
>gi|32350983|gb|AAP75902.1| DNA methyltransferase 3a isoform 4 [Bos taurus]
Length = 821
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 543 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 595
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 596 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 647
>gi|348517682|ref|XP_003446362.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Oreochromis
niloticus]
Length = 953
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG++++ V+ ++ E + +VR +G ++ D
Sbjct: 675 IRVLSLFDGIATGLLVLKDLGIQVEKYVASEVCEDSITVGMVR-------HEGRIMYVGD 727
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + + I+ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 728 VRTV----TRKHIDKWGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 779
>gi|432096830|gb|ELK27408.1| DNA (cytosine-5)-methyltransferase 3A [Myotis davidii]
Length = 1045
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 767 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 819
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 820 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 871
>gi|395732058|ref|XP_003780691.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
3A [Pongo abelii]
Length = 916
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 638 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 690
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 691 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 742
>gi|47221238|emb|CAG13174.1| unnamed protein product [Tetraodon nigroviridis]
Length = 835
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 63/117 (53%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+ + V+ ++ E + VR +G ++ D
Sbjct: 552 IRVLSLFDGIATGLLVLKELGIEVDRYVASEVCEDSITLGFVR-------HQGRIMYVGD 604
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 605 VRGVTRKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 656
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 91/210 (43%), Gaps = 37/210 (17%)
Query: 237 IVHRSLPEAAAGPPYFY-YENVALAPKGVWDT--ISRFLYDVEPEFVDSKYFCAAARKRG 293
++H + P+ P+F+ +ENV GV D ISRFL + P +D+K AA R R
Sbjct: 655 LLHEARPKEGDNRPFFWLFENVVAM--GVSDKRDISRFL-ECNPVMIDAKEVSAAHRARY 711
Query: 294 YVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLT--ERIR 351
+ NLP NR + E WP T + LQ C+ ++ +++R
Sbjct: 712 FWGNLPGMNRL---------VCE--------WPLSATNTDKLDLQECLEHGRMAKFDKVR 754
Query: 352 KALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGG 411
+ + M+E K +++W E+E + GFP ++T
Sbjct: 755 TITTRSNSIKQGKDQHFPVYMNE--KEDILWC----------TEMERIFGFPVHYTDVSN 802
Query: 412 ISRTDRYKSLGNSFQVDTVAYHLSVLKEMY 441
+SR R + LG S+ V + + + LKE +
Sbjct: 803 MSRLARQRLLGRSWSVPVIRHLFAPLKEYF 832
>gi|426241297|ref|XP_004014528.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 2 [Ovis
aries]
Length = 848
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 570 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 624
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 625 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 678
>gi|345781920|ref|XP_540110.3| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Canis lupus
familiaris]
Length = 1093
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 815 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 867
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 868 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 919
>gi|330417960|ref|NP_001193431.1| DNA (cytosine-5)-methyltransferase 3A [Bos taurus]
Length = 909
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 631 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 683
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 684 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 735
>gi|149050844|gb|EDM03017.1| DNA methyltransferase 3A [Rattus norvegicus]
Length = 728
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 450 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 502
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 503 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 554
>gi|351716002|gb|EHB18921.1| DNA (cytosine-5)-methyltransferase 3A, partial [Heterocephalus
glaber]
Length = 914
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 636 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 688
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 689 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 740
>gi|338714103|ref|XP_001503030.2| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Equus caballus]
Length = 973
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 695 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 747
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 748 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 799
>gi|417413163|gb|JAA52927.1| Putative dna cytosine-5-methyltransferase 3a, partial [Desmodus
rotundus]
Length = 930
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 652 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 704
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 705 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 756
>gi|359071877|ref|XP_003586885.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 2
[Bos taurus]
Length = 848
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 570 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 624
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 625 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 678
>gi|32350981|gb|AAP75901.1| DNA methyltransferase 3a [Bos taurus]
Length = 888
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 610 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 662
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 663 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 714
>gi|440906097|gb|ELR56402.1| DNA (cytosine-5)-methyltransferase 3A, partial [Bos grunniens
mutus]
Length = 914
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 636 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 688
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 689 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 740
>gi|332243317|ref|XP_003270826.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Nomascus
leucogenys]
Length = 891
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 613 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 665
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 666 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 717
>gi|426241301|ref|XP_004014530.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 4 [Ovis
aries]
Length = 731
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 516 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 570
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 571 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 624
>gi|301756030|ref|XP_002913875.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
3A-like [Ailuropoda melanoleuca]
Length = 957
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 679 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 731
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 732 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 783
>gi|359070308|ref|XP_003586708.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Bos taurus]
Length = 778
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 500 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 552
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 553 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 604
>gi|426241305|ref|XP_004014532.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 6 [Ovis
aries]
Length = 695
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 480 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 534
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 535 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 588
>gi|354469390|ref|XP_003497112.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Cricetulus
griseus]
Length = 929
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 651 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 703
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 704 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 755
>gi|296482345|tpg|DAA24460.1| TPA: DNA (cytosine-5-)-methyltransferase 3 alpha [Bos taurus]
Length = 723
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 445 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 497
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 498 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 549
>gi|12751473|ref|NP_072046.2| DNA (cytosine-5)-methyltransferase 3A isoform a [Homo sapiens]
gi|28559069|ref|NP_783328.1| DNA (cytosine-5)-methyltransferase 3A isoform a [Homo sapiens]
gi|166215081|sp|Q9Y6K1.4|DNM3A_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 3A; Short=Dnmt3a;
AltName: Full=DNA methyltransferase HsaIIIA; Short=DNA
MTase HsaIIIA; Short=M.HsaIIIA
gi|12746532|gb|AAD33084.2|AF067972_1 DNA cytosine methyltransferase 3 alpha [Homo sapiens]
gi|27694444|gb|AAH43617.1| DNA (cytosine-5-)-methyltransferase 3 alpha [Homo sapiens]
gi|62822212|gb|AAY14761.1| unknown [Homo sapiens]
gi|119621132|gb|EAX00727.1| DNA (cytosine-5-)-methyltransferase 3 alpha, isoform CRA_a [Homo
sapiens]
gi|261859196|dbj|BAI46120.1| DNA (cytosine-5-)-methyltransferase 3 alpha [synthetic construct]
Length = 912
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 634 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 686
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 687 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 738
>gi|410955684|ref|XP_003984481.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Felis catus]
Length = 909
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 631 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 683
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 684 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 735
>gi|301765804|ref|XP_002918315.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 1
[Ailuropoda melanoleuca]
Length = 848
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 570 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 624
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 625 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 678
>gi|26346729|dbj|BAC37013.1| unnamed protein product [Mus musculus]
Length = 618
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ + ++ ++ E + +VR +G ++ D
Sbjct: 411 IRVLSLFDGIATGLLVLKDLGIQVDHYIASEVCEDSITVGMVR-------HQGKIMYVGD 463
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 464 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 515
>gi|426241303|ref|XP_004014531.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 5 [Ovis
aries]
Length = 773
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 558 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 612
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 613 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 666
>gi|390474710|ref|XP_003734830.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A isoform 2
[Callithrix jacchus]
Length = 909
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 631 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 683
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 684 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 735
>gi|380798679|gb|AFE71215.1| DNA (cytosine-5)-methyltransferase 3A isoform a, partial [Macaca
mulatta]
Length = 765
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 487 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 539
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 540 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 591
>gi|358415113|ref|XP_003583010.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 2
[Bos taurus]
Length = 848
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 570 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 624
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 625 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 678
>gi|426241295|ref|XP_004014527.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 1 [Ovis
aries]
Length = 842
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 564 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 618
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 619 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 672
>gi|51556265|ref|NP_001003957.1| DNA (cytosine-5)-methyltransferase 3A isoform 2 [Rattus norvegicus]
gi|50539391|tpe|CAE52318.1| TPA: putative DNA (cytosine-5) methyltransferase 3a2 [Rattus
norvegicus]
Length = 689
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 411 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 463
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 464 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 515
>gi|119621133|gb|EAX00728.1| DNA (cytosine-5-)-methyltransferase 3 alpha, isoform CRA_b [Homo
sapiens]
Length = 914
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 636 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 688
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 689 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 740
>gi|431911894|gb|ELK14038.1| DNA (cytosine-5)-methyltransferase 3A [Pteropus alecto]
Length = 928
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 650 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 702
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + ++ I +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 703 VRSV----TQKHIQEWGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 754
>gi|18033253|gb|AAL57039.1|AF331856_1 DNA cytosine methyltransferase 3 alpha [Homo sapiens]
Length = 909
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 631 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 683
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 684 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 735
>gi|167774091|gb|ABZ92480.1| DNA (cytosine-5-)-methyltransferase 3 alpha [synthetic construct]
Length = 912
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 634 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 686
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 687 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 738
>gi|62087246|dbj|BAD92070.1| DNA cytosine methyltransferase 3 alpha isoform a variant [Homo
sapiens]
Length = 811
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 664 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 716
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + ++ I +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 717 VRSV----TQKHIQEWGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 768
>gi|426334932|ref|XP_004028990.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Gorilla
gorilla gorilla]
gi|23954438|gb|AAN40037.1|AF480163_1 DNA cytosine methyltransferase 3A2 [Homo sapiens]
Length = 689
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 411 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 463
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 464 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 515
>gi|410954030|ref|XP_003983670.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 1 [Felis
catus]
Length = 848
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 570 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 624
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 625 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 678
>gi|359071887|ref|XP_003586887.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 4
[Bos taurus]
Length = 773
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 558 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 612
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 613 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 666
>gi|51556225|ref|NP_001003958.1| DNA (cytosine-5)-methyltransferase 3A isoform 1 [Rattus norvegicus]
gi|123778851|sp|Q1LZ53.1|DNM3A_RAT RecName: Full=DNA (cytosine-5)-methyltransferase 3A; Short=Dnmt3a
gi|50539389|tpe|CAE52317.1| TPA: putative DNA (cytosine-5) methyltransferase 3a [Rattus
norvegicus]
Length = 908
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 630 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 682
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 683 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 734
>gi|358415119|ref|XP_003583013.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 5
[Bos taurus]
Length = 731
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 516 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 570
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 571 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 624
>gi|31074169|gb|AAP20555.1| DNA cytosine-5 methyltransferase 3b isoform 5 [Bos taurus]
Length = 785
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 566 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 620
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 621 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 674
>gi|426241299|ref|XP_004014529.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3 [Ovis
aries]
Length = 856
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 578 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 632
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 633 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 686
>gi|344279847|ref|XP_003411697.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 1
[Loxodonta africana]
Length = 847
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 569 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 623
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 624 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 677
>gi|13938621|gb|AAH07466.1| DNA methyltransferase 3A [Mus musculus]
Length = 908
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 630 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 682
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 683 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 734
>gi|395828672|ref|XP_003787491.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Otolemur
garnettii]
Length = 723
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 445 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 497
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 498 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 549
>gi|403288228|ref|XP_003935313.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A isoform 1 [Saimiri
boliviensis boliviensis]
Length = 909
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 631 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 683
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 684 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 735
>gi|344280204|ref|XP_003411875.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Loxodonta
africana]
Length = 967
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 689 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 741
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 742 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 793
>gi|148222543|ref|NP_001090906.1| DNA (cytosine-5)-methyltransferase 3A [Sus scrofa]
gi|110559302|gb|ABG75907.1| DNA methyltransferase 3a2 [Sus scrofa]
Length = 689
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 411 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 463
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 464 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 515
>gi|359071890|ref|XP_003586888.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 5
[Bos taurus]
Length = 731
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 516 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 570
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 571 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 624
>gi|6681209|ref|NP_031898.1| DNA (cytosine-5)-methyltransferase 3A isoform 1 [Mus musculus]
gi|418203928|ref|NP_001258682.1| DNA (cytosine-5)-methyltransferase 3A isoform 1 [Mus musculus]
gi|17374900|sp|O88508.2|DNM3A_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 3A; Short=Dnmt3a;
AltName: Full=DNA methyltransferase MmuIIIA; Short=DNA
MTase MmuIIIA; Short=M.MmuIIIA
gi|6449468|gb|AAC40177.2| DNA cytosine-5 methyltransferase 3A [Mus musculus]
gi|26354967|dbj|BAC41110.1| unnamed protein product [Mus musculus]
gi|74181067|dbj|BAE27806.1| unnamed protein product [Mus musculus]
gi|74188565|dbj|BAE28033.1| unnamed protein product [Mus musculus]
gi|74188590|dbj|BAE28043.1| unnamed protein product [Mus musculus]
gi|74188648|dbj|BAE28067.1| unnamed protein product [Mus musculus]
gi|148669440|gb|EDL01387.1| DNA methyltransferase 3A, isoform CRA_a [Mus musculus]
Length = 908
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 630 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 682
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 683 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 734
>gi|358415117|ref|XP_003583012.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 4
[Bos taurus]
Length = 773
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 558 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 612
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 613 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 666
>gi|24371231|ref|NP_714965.1| DNA (cytosine-5)-methyltransferase 3A isoform 2 [Mus musculus]
gi|23954440|gb|AAN40038.1|AF480164_1 DNA cytosine methyltransferase 3A2 [Mus musculus]
gi|74180540|dbj|BAE34200.1| unnamed protein product [Mus musculus]
gi|148669441|gb|EDL01388.1| DNA methyltransferase 3A, isoform CRA_b [Mus musculus]
Length = 689
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 411 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 463
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 464 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 515
>gi|359071874|ref|XP_003586884.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 1
[Bos taurus]
Length = 842
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 564 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 618
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 619 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 672
>gi|359071893|ref|XP_003586889.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 6
[Bos taurus]
Length = 695
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 480 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 534
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 535 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 588
>gi|358415111|ref|XP_003583009.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 1
[Bos taurus]
Length = 842
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 564 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 618
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 619 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 672
>gi|410954034|ref|XP_003983672.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3 [Felis
catus]
Length = 731
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 516 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 570
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 571 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 624
>gi|358415121|ref|XP_003583014.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 6
[Bos taurus]
Length = 695
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 480 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 534
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 535 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 588
>gi|345322832|ref|XP_001509081.2| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like
[Ornithorhynchus anatinus]
Length = 853
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 575 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 627
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ N ++ I +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 628 VR----NVTQKHIQEWGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 679
>gi|109102239|ref|XP_001083358.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A isoform 2 [Macaca
mulatta]
gi|402890260|ref|XP_003908407.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A [Papio anubis]
Length = 723
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 445 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 497
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 498 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 549
>gi|77176455|ref|NP_715640.2| DNA (cytosine-5)-methyltransferase 3A isoform b [Homo sapiens]
gi|114576490|ref|XP_001148731.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A isoform 5 [Pan
troglodytes]
gi|397513583|ref|XP_003827091.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Pan
paniscus]
Length = 723
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 445 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 497
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 498 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 549
>gi|301765810|ref|XP_002918318.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 4
[Ailuropoda melanoleuca]
Length = 773
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 558 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 612
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 613 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 666
>gi|359071880|ref|XP_003586886.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 3
[Bos taurus]
Length = 856
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 578 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 632
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 633 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 686
>gi|358415115|ref|XP_003583011.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 3
[Bos taurus]
Length = 856
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 578 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 632
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 633 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 686
>gi|410954038|ref|XP_003983674.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 5 [Felis
catus]
Length = 773
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 558 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 612
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 613 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 666
>gi|31074167|gb|AAP20554.1| DNA cytosine-5 methyltransferase 3b isoform 4 [Bos taurus]
Length = 735
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 566 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 620
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 621 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 674
>gi|164448558|ref|NP_861529.2| DNA (cytosine-5)-methyltransferase 3B [Bos taurus]
Length = 844
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 566 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 620
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 621 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 674
>gi|410954036|ref|XP_003983673.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 4 [Felis
catus]
Length = 695
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 480 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 534
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 535 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 588
>gi|296481021|tpg|DAA23136.1| TPA: DNA (cytosine-5-)-methyltransferase 3 beta [Bos taurus]
Length = 842
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 566 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 620
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 621 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 674
>gi|440912517|gb|ELR62078.1| DNA (cytosine-5)-methyltransferase 3B [Bos grunniens mutus]
Length = 852
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 574 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 628
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 629 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 682
>gi|345789914|ref|XP_003433293.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
3B [Canis lupus familiaris]
Length = 843
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 565 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 619
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 620 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 673
>gi|344279853|ref|XP_003411700.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 4
[Loxodonta africana]
Length = 730
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 515 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 569
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 570 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 623
>gi|296224354|ref|XP_002758031.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A isoform 1
[Callithrix jacchus]
gi|403288230|ref|XP_003935314.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A isoform 2 [Saimiri
boliviensis boliviensis]
Length = 723
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 445 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 497
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 498 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 549
>gi|281339306|gb|EFB14890.1| hypothetical protein PANDA_006761 [Ailuropoda melanoleuca]
Length = 854
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 576 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 630
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 631 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 684
>gi|410954032|ref|XP_003983671.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 2 [Felis
catus]
Length = 856
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 578 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 632
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 633 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 686
>gi|31074163|gb|AAP20552.1| DNA cytosine-5 methyltransferase 3b isoform 1 [Bos taurus]
Length = 826
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 566 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 620
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 621 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 674
>gi|344279851|ref|XP_003411699.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3
[Loxodonta africana]
Length = 772
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 557 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 611
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 612 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 665
>gi|301765806|ref|XP_002918316.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 2
[Ailuropoda melanoleuca]
Length = 856
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 578 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 632
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 633 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 686
>gi|301765808|ref|XP_002918317.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like isoform 3
[Ailuropoda melanoleuca]
Length = 848
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 570 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 624
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 625 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 678
>gi|344279849|ref|XP_003411698.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 2
[Loxodonta africana]
Length = 855
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 577 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 631
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 632 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 685
>gi|31074165|gb|AAP20553.1| DNA cytosine-5 methyltransferase 3b isoform 3 [Bos taurus]
Length = 763
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 566 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 620
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 621 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 674
>gi|344279855|ref|XP_003411701.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 5
[Loxodonta africana]
Length = 695
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 480 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 534
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 535 NITKRNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 588
>gi|351708403|gb|EHB11322.1| DNA (cytosine-5)-methyltransferase 3B [Heterocephalus glaber]
Length = 861
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 583 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 637
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 638 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 691
>gi|348581219|ref|XP_003476375.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Cavia
porcellus]
Length = 657
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ +I E + + +G + DV+
Sbjct: 379 IRVLSLFDGIATGYLVLKELGIKVEKYVASEICEESIAV-----GTVKHEGNIKYVNDVR 433
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+
Sbjct: 434 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLN 484
>gi|40226497|gb|AAH23612.1| DNMT3A protein [Homo sapiens]
Length = 351
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 73 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 125
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 126 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 177
>gi|395830032|ref|XP_003788140.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3
[Otolemur garnettii]
Length = 847
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 569 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 623
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 624 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 677
>gi|431894289|gb|ELK04089.1| DNA (cytosine-5)-methyltransferase 3B [Pteropus alecto]
Length = 837
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 559 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 613
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 614 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 667
>gi|432096400|gb|ELK27152.1| DNA (cytosine-5)-methyltransferase 3B [Myotis davidii]
Length = 836
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 558 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 612
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ +E+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 613 NITKKNVEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYAR 666
>gi|395830034|ref|XP_003788141.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 4
[Otolemur garnettii]
Length = 772
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 557 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 611
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 612 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 665
>gi|395830030|ref|XP_003788139.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 2
[Otolemur garnettii]
Length = 835
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 557 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 611
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 612 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 665
>gi|348517110|ref|XP_003446078.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Oreochromis
niloticus]
Length = 919
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG ++ V+ ++ E ++ +VR +G + D
Sbjct: 641 IRVLSLFDGIATGYLVLRDLGFKVGQYVASEVCEDSISVGVVR-------HEGKIKYVHD 693
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 694 VRNITKKNIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLLSEA 748
Query: 563 K 563
K
Sbjct: 749 K 749
>gi|395830028|ref|XP_003788138.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 1
[Otolemur garnettii]
Length = 855
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 577 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 631
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 632 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 685
>gi|395830036|ref|XP_003788142.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 5
[Otolemur garnettii]
Length = 730
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 515 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 569
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 570 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 623
>gi|156363806|ref|XP_001626231.1| predicted protein [Nematostella vectensis]
gi|156213100|gb|EDO34131.1| predicted protein [Nematostella vectensis]
Length = 623
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VL+LF GI AL+ LG+ S +I E + + N + D++
Sbjct: 337 IRVLALFDGIATGLQALNELGIVSDKYYSAEIDEQAIQVTK-----VNHGDRITHLGDIK 391
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
L ++I ++ G FDLVIGGSPC +L+ +N R EG LF+++FR+L
Sbjct: 392 DLTESQIREL----GPFDLVIGGSPCQDLSIANPARRGIFEG-SGRLFFEFFRLL 441
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 35/211 (16%)
Query: 236 VIVHRSLPEAAAGPPYFY-YENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGY 294
+++H P+F+ +ENV TISRFL P VD+K A R R +
Sbjct: 440 LLMHAKPSRTCPSRPFFWLFENVVGMRAEDKKTISRFLQS-NPVVVDAKEVSPAHRPRYF 498
Query: 295 VHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKAL 354
NLP NR +PLP + L L P+ ++ +QT +A + +K +
Sbjct: 499 WGNLPGMNRPA-IPLPG----DRLTLQECLEPNCGRKARFTKVQTITTNANSLTQTKKNI 553
Query: 355 EEC----DGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGG 410
DG E + +++W E+E L GFP ++T
Sbjct: 554 LPVAVNDDGGQE--------------REDILWC----------TEMERLFGFPSHYTDVN 589
Query: 411 GISRTDRYKSLGNSFQVDTVAYHLSVLKEMY 441
+ RT R + LGN++ V V + LS LK+ +
Sbjct: 590 NMGRTQRQRLLGNAWSVPVVRHLLSPLKDYF 620
>gi|395830038|ref|XP_003788143.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 6
[Otolemur garnettii]
Length = 694
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 479 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 533
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 534 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 587
>gi|332249027|ref|XP_003273664.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B [Nomascus
leucogenys]
Length = 868
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 590 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 644
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 645 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 698
>gi|291388722|ref|XP_002710851.1| PREDICTED: DNA cytosine-5 methyltransferase 3 beta isoform 1
[Oryctolagus cuniculus]
Length = 776
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 561 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 615
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
N ++ I+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 616 ----NITKKNIDEWGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 669
>gi|161761041|pdb|2QRV|A Chain A, Structure Of Dnmt3a-Dnmt3l C-Terminal Domain Complex
gi|161761044|pdb|2QRV|D Chain D, Structure Of Dnmt3a-Dnmt3l C-Terminal Domain Complex
gi|161761045|pdb|2QRV|E Chain E, Structure Of Dnmt3a-Dnmt3l C-Terminal Domain Complex
gi|161761048|pdb|2QRV|H Chain H, Structure Of Dnmt3a-Dnmt3l C-Terminal Domain Complex
Length = 295
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 17 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 69
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 70 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 121
>gi|291388724|ref|XP_002710852.1| PREDICTED: DNA cytosine-5 methyltransferase 3 beta isoform 2
[Oryctolagus cuniculus]
Length = 859
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 581 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 635
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
N ++ I+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 636 ----NITKKNIDEWGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 689
>gi|355684541|gb|AER97433.1| DNA -methyltransferase 3 alpha [Mustela putorius furo]
Length = 428
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 150 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 202
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 203 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 254
>gi|119596756|gb|EAW76350.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_a [Homo
sapiens]
Length = 812
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 629
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 630 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 683
>gi|354480325|ref|XP_003502358.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 2
[Cricetulus griseus]
Length = 783
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ + + +G + DV+
Sbjct: 568 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCTESIAV-----GTVKHEGQIKYVNDVR 622
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 623 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 676
>gi|291388726|ref|XP_002710853.1| PREDICTED: DNA cytosine-5 methyltransferase 3 beta isoform 3
[Oryctolagus cuniculus]
Length = 796
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ E + + +G + DV+
Sbjct: 581 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 635
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
N ++ I+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 636 ----NITKKNIDEWGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 689
>gi|296199840|ref|XP_002747336.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 2
[Callithrix jacchus]
Length = 845
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 567 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 621
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 622 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 675
>gi|354480329|ref|XP_003502360.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 4
[Cricetulus griseus]
Length = 741
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ + + +G + DV+
Sbjct: 526 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCTESIAV-----GTVKHEGQIKYVNDVR 580
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 581 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 634
>gi|354480323|ref|XP_003502357.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 1
[Cricetulus griseus]
Length = 866
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ + + +G + DV+
Sbjct: 588 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCTESIAV-----GTVKHEGQIKYVNDVR 642
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 643 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 696
>gi|354480327|ref|XP_003502359.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3
[Cricetulus griseus]
Length = 803
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ + + +G + DV+
Sbjct: 588 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCTESIAV-----GTVKHEGQIKYVNDVR 642
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 643 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 696
>gi|296199842|ref|XP_002747337.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3
[Callithrix jacchus]
Length = 770
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 609
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 610 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 663
>gi|17390482|gb|AAH18214.1| DNMT3A protein, partial [Homo sapiens]
Length = 285
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 7 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 59
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 60 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 111
>gi|28559065|ref|NP_787046.1| DNA (cytosine-5)-methyltransferase 3B isoform 6 [Homo sapiens]
gi|397487385|ref|XP_003814781.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B [Pan paniscus]
gi|6118092|gb|AAF04015.1|AF176228_1 DNA cytosine-5 methyltransferase 3B [Homo sapiens]
gi|119596762|gb|EAW76356.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_e [Homo
sapiens]
Length = 845
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 567 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 621
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 622 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 675
>gi|426391345|ref|XP_004062035.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3 [Gorilla
gorilla gorilla]
Length = 845
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 567 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 621
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 622 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 675
>gi|296199844|ref|XP_002747338.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 4
[Callithrix jacchus]
Length = 728
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 513 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 567
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 568 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 621
>gi|297260031|ref|XP_001107440.2| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3 [Macaca
mulatta]
Length = 823
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 545 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 599
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 600 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 653
>gi|296199838|ref|XP_002747335.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 1
[Callithrix jacchus]
Length = 853
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 629
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 630 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 683
>gi|354480331|ref|XP_003502361.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 5
[Cricetulus griseus]
Length = 700
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ + + +G + DV+
Sbjct: 485 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCTESIAV-----GTVKHEGQIKYVNDVR 539
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 540 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 593
>gi|402882794|ref|XP_003904918.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3 [Papio
anubis]
Length = 845
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 567 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 621
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 622 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 675
>gi|326790943|ref|YP_004308764.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427]
gi|326541707|gb|ADZ83566.1| DNA-cytosine methyltransferase [Clostridium lentocellum DSM 5427]
Length = 292
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 12/117 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+NVLSLF GI VAL R G+++ N + +I + + I + + Q G +
Sbjct: 1 MNVLSLFDGISCGMVALERAGIKVDNYYASEIEQDSIKISKKNYPWIIQLGDI------- 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLA--GSNRHSRDGLEGKESSLFYDYFRIL 559
N ++M++ D+VIGGSPC +L+ +R GL G++S LF+ Y RIL
Sbjct: 54 ---TNITKEMLDTIMPIDIVIGGSPCQDLSVYKYDRGEVTGLNGEKSGLFHHYVRIL 107
>gi|28559061|ref|NP_787044.1| DNA (cytosine-5)-methyltransferase 3B isoform 2 [Homo sapiens]
gi|119596761|gb|EAW76355.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_d [Homo
sapiens]
Length = 833
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 609
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 610 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 663
>gi|402882796|ref|XP_003904919.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 4 [Papio
anubis]
Length = 770
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 609
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 610 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 663
>gi|426391343|ref|XP_004062034.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 2 [Gorilla
gorilla gorilla]
Length = 833
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 609
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 610 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 663
>gi|332858344|ref|XP_003316964.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 1 [Pan
troglodytes]
Length = 833
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 609
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 610 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 663
>gi|333440487|ref|NP_001193984.1| DNA (cytosine-5)-methyltransferase 3B isoform 7 [Homo sapiens]
Length = 728
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 513 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 567
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 568 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 621
>gi|344244170|gb|EGW00274.1| DNA (cytosine-5)-methyltransferase 3B [Cricetulus griseus]
Length = 763
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ + + +G + DV+
Sbjct: 485 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCTESIAV-----GTVKHEGQIKYVNDVR 539
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 540 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 593
>gi|426391341|ref|XP_004062033.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 1 [Gorilla
gorilla gorilla]
Length = 853
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 629
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 630 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 683
>gi|403281272|ref|XP_003932117.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B [Saimiri
boliviensis boliviensis]
Length = 694
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 479 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 533
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 534 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 587
>gi|296199846|ref|XP_002747339.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 5
[Callithrix jacchus]
Length = 694
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 479 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 533
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 534 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 587
>gi|426391349|ref|XP_004062037.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 5 [Gorilla
gorilla gorilla]
Length = 728
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 513 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 567
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 568 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 621
>gi|332858346|ref|XP_003316965.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 2 [Pan
troglodytes]
Length = 770
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 609
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 610 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 663
>gi|5901940|ref|NP_008823.1| DNA (cytosine-5)-methyltransferase 3B isoform 1 [Homo sapiens]
gi|17375667|sp|Q9UBC3.1|DNM3B_HUMAN RecName: Full=DNA (cytosine-5)-methyltransferase 3B; Short=Dnmt3b;
AltName: Full=DNA methyltransferase HsaIIIB; Short=DNA
MTase HsaIIIB; Short=M.HsaIIIB
gi|5823168|gb|AAD53063.1|AF156488_1 DNA cytosine-5 methyltransferase 3 beta 1 [Homo sapiens]
gi|18033255|gb|AAL57040.1|AF331857_1 DNA cytosine methyltransferase 3 beta [Homo sapiens]
gi|108752172|gb|AAI11934.1| DNMT3B protein [synthetic construct]
gi|110645774|gb|AAI18503.1| DNMT3B protein [synthetic construct]
gi|119596758|gb|EAW76352.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_c [Homo
sapiens]
gi|119596760|gb|EAW76354.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_c [Homo
sapiens]
gi|261857548|dbj|BAI45296.1| DNA (cytosine-5-)-methyltransferase 3 beta [synthetic construct]
Length = 853
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 629
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 630 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 683
>gi|402882792|ref|XP_003904917.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 2 [Papio
anubis]
Length = 833
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 609
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 610 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 663
>gi|332858348|ref|XP_003316966.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 3 [Pan
troglodytes]
Length = 728
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 513 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 567
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 568 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 621
>gi|198420928|ref|XP_002123461.1| PREDICTED: similar to DNA cytosine methyltransferase 3 alpha [Ciona
intestinalis]
Length = 662
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Query: 407 TRGGGISRTDRYKSLGNSF-QVDTVAYHLSVLKEMYP----DGINVLSLFSGIGGAEVAL 461
T G + R D + + + F V V Y + L + P I VLSLF GI V+L
Sbjct: 332 TEKGLLHRRDNWHNRLSKFVSVGEVEYEIVSLPKSPPAWERKPIRVLSLFDGIATGFVSL 391
Query: 462 HRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGF 521
+LG+ +K + SE++ + + + DV ++ ++M++ +G F
Sbjct: 392 KQLGIEVKVYFA---SEIDHEAICV--SEIRHPRVVKHVGDVCEI----TDKMLSDWGPF 442
Query: 522 DLVIGGSPCNNLAGSNRHSRDGLEGKESS--LFYDYFRILDLVKNMMQR 568
DLVIGGSPCN+L+ N +R G+ + S LF++Y RIL+ K + +
Sbjct: 443 DLVIGGSPCNDLSIVN-PARKGIWSDKGSGHLFFEYLRILNTCKVLAAK 490
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 77/197 (39%), Gaps = 39/197 (19%)
Query: 251 YFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLP 310
++ +ENV + TIS +L P +D+K A R R + NLP R
Sbjct: 496 FWLFENVVCMDQSSRQTISHYL-QRNPIVLDAKEVSPAHRPRCFWGNLPGMRR------- 547
Query: 311 PQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAK--LTERIRKALEECD----GEPEPP 364
P T++H L+ C+ + T+++R + G
Sbjct: 548 ---------------PMVATKAHKLTLEECLEPGRKATTDKLRTITTKLQSVRGGHGSGG 592
Query: 365 HHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNS 424
V+ + + + +W+ E+E + GFP ++T + RT R + LG S
Sbjct: 593 LTSNSLVIQQRDQHDCLWI----------TEIERVFGFPDHYTDVCNLPRTGRLRILGKS 642
Query: 425 FQVDTVAYHLSVLKEMY 441
+ V + + + LK+ +
Sbjct: 643 WSVPVIKHIFAPLKDYF 659
>gi|387541422|gb|AFJ71338.1| DNA (cytosine-5)-methyltransferase 3B isoform 3 [Macaca mulatta]
Length = 770
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 609
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 610 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 663
>gi|332858342|ref|XP_514580.3| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 5 [Pan
troglodytes]
Length = 853
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 629
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 630 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 683
>gi|28559063|ref|NP_787045.1| DNA (cytosine-5)-methyltransferase 3B isoform 3 [Homo sapiens]
gi|5823166|gb|AAD53062.1|AF156487_1 DNA cytosine-5 methyltransferase 3 beta 3 [Homo sapiens]
gi|119596757|gb|EAW76351.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_b [Homo
sapiens]
gi|119596759|gb|EAW76353.1| DNA (cytosine-5-)-methyltransferase 3 beta, isoform CRA_b [Homo
sapiens]
gi|410301244|gb|JAA29222.1| DNA (cytosine-5-)-methyltransferase 3 beta [Pan troglodytes]
Length = 770
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 609
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 610 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 663
>gi|402882798|ref|XP_003904920.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 5 [Papio
anubis]
Length = 728
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 513 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 567
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 568 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 621
>gi|426391347|ref|XP_004062036.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 4 [Gorilla
gorilla gorilla]
Length = 770
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 555 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 609
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 610 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 663
>gi|402882790|ref|XP_003904916.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 1 [Papio
anubis]
Length = 853
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 629
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 630 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 683
>gi|355563226|gb|EHH19788.1| DNA (cytosine-5)-methyltransferase 3B [Macaca mulatta]
gi|355784580|gb|EHH65431.1| DNA (cytosine-5)-methyltransferase 3B [Macaca fascicularis]
Length = 853
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 629
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 630 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 683
>gi|333440489|ref|NP_001193985.1| DNA (cytosine-5)-methyltransferase 3B isoform 8 [Homo sapiens]
Length = 694
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 479 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 533
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 534 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 587
>gi|297706862|ref|XP_002830246.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B, partial [Pongo
abelii]
Length = 751
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 473 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 527
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 528 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 581
>gi|402882800|ref|XP_003904921.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 6 [Papio
anubis]
Length = 694
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 479 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 533
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 534 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 587
>gi|332858350|ref|XP_003316967.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 4 [Pan
troglodytes]
Length = 694
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 479 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 533
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 534 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 587
>gi|20385949|gb|AAM21516.1|AF438205_2 GST-M.SPRX methyltransferase fusion protein [Mutation screening
vector pSPRX]
Length = 659
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 62/115 (53%), Gaps = 13/115 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIGG E AL +GV + V SE+++ V+S+ N L +F DV
Sbjct: 230 LRVMSLFSGIGGFEAALRNIGVGYE---LVGFSEIDKYAVKSFCAIHNVDEQL-NFGDVS 285
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++D ++ + FD+++GGSPC + + + R G E +LF+ Y L
Sbjct: 286 KIDKKKLPE-------FDILVGGSPCQSFSVAGH--RKGFEDTRGTLFFQYVETL 331
>gi|426391351|ref|XP_004062038.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B isoform 6 [Gorilla
gorilla gorilla]
Length = 694
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 479 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 533
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 534 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 587
>gi|301621114|ref|XP_002939909.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Xenopus
(Silurana) tropicalis]
Length = 495
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI V+L L ++++ V+ ++ + N+ +T G + DV+
Sbjct: 217 IRVLSLFDGIATGLVSLKILKIQVEKYVASEVCKDAINV-----GKTRHPGEITYVGDVR 271
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
N + I+ +G FDLVIGGSPCN+LA N R GL LF+D+ R+L
Sbjct: 272 ----NITRKQISEWGPFDLVIGGSPCNDLAVVN-PVRKGLFDGTGRLFFDFPRLL 321
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 33/205 (16%)
Query: 237 IVHRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVH 296
++H + P+A P ++ +ENV KGV I FL + P +D+K AA R R +
Sbjct: 320 LLHEAEPKANERPFFWLFENVVAMDKGVRKYICNFL-ESNPVMIDAKEMSAAHRARNFWG 378
Query: 297 NLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEE 356
NLP RH P+ +N D +CL+T +++
Sbjct: 379 NLPGMTRH---PVATEN---------------DKLELQDCLET--GRVAKFKKVHTITTN 418
Query: 357 CDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTD 416
+ H MD +++W E+E + GFP ++T G ++R D
Sbjct: 419 PYSMKQGKQHQYPVTMDGNE--DILWC----------TEMERVFGFPVHYTDVGNMNRID 466
Query: 417 RYKSLGNSFQVDTVAYHLSVLKEMY 441
R + LG S+ V + + + LKE +
Sbjct: 467 RQRLLGRSWSVPVIRHLFAPLKEYF 491
>gi|8347118|gb|AAF74515.1|AF151969_1 DNA cytosine-specific methyltransferase isoform 1 [Mus musculus]
gi|8347128|gb|AAF74519.1|AF151973_1 DNA cytosine-specific methyltransferase isoform 5 [Mus musculus]
Length = 859
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ ++ ++ + + +G + DV+
Sbjct: 581 IRVLSLFDGIATGYLVLKELGIKVEKYIASEVCAESIAV-----GTVKHEGQIKYVNDVR 635
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 636 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 689
>gi|8347123|gb|AAF74517.1|AF151971_1 DNA cytosine-specific methyltransferase isoform 3 [Mus musculus]
gi|8347137|gb|AAF74522.1|AF151976_1 DNA cytosine-specific methyltransferase isoform 8 [Mus musculus]
Length = 776
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ ++ ++ + + +G + DV+
Sbjct: 561 IRVLSLFDGIATGYLVLKELGIKVEKYIASEVCAESIAV-----GTVKHEGQIKYVNDVR 615
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 616 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 669
>gi|8347126|gb|AAF74518.1|AF151972_1 DNA cytosine-specific methyltransferase isoform 4 [Mus musculus]
gi|8347135|gb|AAF74521.1|AF151975_1 DNA cytosine-specific methyltransferase isoform 7 [Mus musculus]
Length = 796
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ ++ ++ + + +G + DV+
Sbjct: 581 IRVLSLFDGIATGYLVLKELGIKVEKYIASEVCAESIAV-----GTVKHEGQIKYVNDVR 635
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 636 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 689
>gi|8347120|gb|AAF74516.1|AF151970_1 DNA cytosine-specific methyltransferase isoform 2 [Mus musculus]
gi|8347131|gb|AAF74520.1|AF151974_1 DNA cytosine-specific methyltransferase isoform 6 [Mus musculus]
Length = 839
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ ++ ++ + + +G + DV+
Sbjct: 561 IRVLSLFDGIATGYLVLKELGIKVEKYIASEVCAESIAV-----GTVKHEGQIKYVNDVR 615
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 616 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 669
>gi|172088103|ref|NP_034198.3| DNA (cytosine-5)-methyltransferase 3B isoform 3 [Mus musculus]
gi|415701966|ref|NP_001258676.1| DNA (cytosine-5)-methyltransferase 3B isoform 3 [Mus musculus]
gi|6449474|gb|AAC40180.2| DNA cytosine-5 methyltransferase 3B3 [Mus musculus]
gi|148674085|gb|EDL06032.1| mCG10465, isoform CRA_a [Mus musculus]
gi|148674088|gb|EDL06035.1| mCG10465, isoform CRA_a [Mus musculus]
Length = 776
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ ++ ++ + + +G + DV+
Sbjct: 561 IRVLSLFDGIATGYLVLKELGIKVEKYIASEVCAESIAV-----GTVKHEGQIKYVNDVR 615
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 616 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 669
>gi|172088099|ref|NP_001003961.2| DNA (cytosine-5)-methyltransferase 3B isoform 1 [Mus musculus]
gi|415701731|ref|NP_001258673.1| DNA (cytosine-5)-methyltransferase 3B isoform 1 [Mus musculus]
gi|17374904|sp|O88509.2|DNM3B_MOUSE RecName: Full=DNA (cytosine-5)-methyltransferase 3B; Short=Dnmt3b;
AltName: Full=DNA methyltransferase MmuIIIB; Short=DNA
MTase MmuIIIB; Short=M.MmuIIIB
gi|6449470|gb|AAC40178.2| DNA cytosine-5 methyltransferase 3B1 [Mus musculus]
gi|148674086|gb|EDL06033.1| mCG10465, isoform CRA_b [Mus musculus]
gi|148674089|gb|EDL06036.1| mCG10465, isoform CRA_b [Mus musculus]
Length = 859
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ ++ ++ + + +G + DV+
Sbjct: 581 IRVLSLFDGIATGYLVLKELGIKVEKYIASEVCAESIAV-----GTVKHEGQIKYVNDVR 635
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 636 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 689
>gi|193785499|dbj|BAG50865.1| unnamed protein product [Homo sapiens]
Length = 489
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 274 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 328
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+
Sbjct: 329 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLN 379
>gi|172088101|ref|NP_001003960.2| DNA (cytosine-5)-methyltransferase 3B isoform 2 [Mus musculus]
gi|415701816|ref|NP_001258674.1| DNA (cytosine-5)-methyltransferase 3B isoform 2 [Mus musculus]
gi|6449472|gb|AAC40179.2| DNA cytosine-5 methyltransferase 3B2 [Mus musculus]
gi|148674090|gb|EDL06037.1| mCG10465, isoform CRA_d [Mus musculus]
gi|148674091|gb|EDL06038.1| mCG10465, isoform CRA_d [Mus musculus]
Length = 839
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ ++ ++ + + +G + DV+
Sbjct: 561 IRVLSLFDGIATGYLVLKELGIKVEKYIASEVCAESIAV-----GTVKHEGQIKYVNDVR 615
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 616 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 669
>gi|172088108|ref|NP_001116469.1| DNA (cytosine-5)-methyltransferase 3B isoform 5 [Mus musculus]
gi|76780249|gb|AAI05923.1| DNA methyltransferase 3B [Mus musculus]
gi|111493961|gb|AAI05678.1| DNA methyltransferase 3B [Mus musculus]
Length = 860
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ ++ ++ + + +G + DV+
Sbjct: 582 IRVLSLFDGIATGYLVLKELGIKVEKYIASEVCAESIAV-----GTVKHEGQIKYVNDVR 636
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 637 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 690
>gi|149030967|gb|EDL85994.1| rCG37517, isoform CRA_c [Rattus norvegicus]
Length = 796
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ + + +G + DV+
Sbjct: 581 IRVLSLFDGIATGYLVLKDLGIKVEKYVASEVCAESIAV-----GTIKHEGQIKYVNDVR 635
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 636 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 689
>gi|149030968|gb|EDL85995.1| rCG37517, isoform CRA_d [Rattus norvegicus]
Length = 776
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ + + +G + DV+
Sbjct: 561 IRVLSLFDGIATGYLVLKDLGIKVEKYVASEVCAESIAV-----GTIKHEGQIKYVNDVR 615
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 616 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 669
>gi|172088105|ref|NP_001003963.2| DNA (cytosine-5)-methyltransferase 3B isoform 4 [Mus musculus]
gi|415701903|ref|NP_001258675.1| DNA (cytosine-5)-methyltransferase 3B isoform 4 [Mus musculus]
gi|21655121|gb|AAL85481.1| DNA cytosine methyltransferase 3b6 [Mus musculus]
gi|148674087|gb|EDL06034.1| mCG10465, isoform CRA_c [Mus musculus]
gi|148674092|gb|EDL06039.1| mCG10465, isoform CRA_c [Mus musculus]
Length = 796
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ ++ ++ + + +G + DV+
Sbjct: 581 IRVLSLFDGIATGYLVLKELGIKVEKYIASEVCAESIAV-----GTVKHEGQIKYVNDVR 635
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 636 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 689
>gi|345309758|ref|XP_001519246.2| PREDICTED: DNA (cytosine-5)-methyltransferase 3B, partial
[Ornithorhynchus anatinus]
Length = 674
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ V+ +I E + VR +G + D
Sbjct: 443 IRVLSLFDGIATGYLVLKDLGIKVDKYVASEICEDSIALGTVR-------HEGNIEYVHD 495
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
V+ N ++ I+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+
Sbjct: 496 VR----NITKRHIDEWGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYA 550
Query: 563 K 563
+
Sbjct: 551 R 551
>gi|126293841|ref|XP_001362485.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Monodelphis
domestica]
Length = 756
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ ++ +I E + + +G + DV+
Sbjct: 478 IRVLSLFDGIATGYLVLKELGIKVDKYIASEICEDSIAV-----GTVKHEGNIKYVHDVR 532
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
N ++ I+ +G FDL+IGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 533 ----NITKRQIDEWGPFDLLIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 586
>gi|149030966|gb|EDL85993.1| rCG37517, isoform CRA_b [Rattus norvegicus]
Length = 839
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ + + +G + DV+
Sbjct: 561 IRVLSLFDGIATGYLVLKDLGIKVEKYVASEVCAESIAV-----GTIKHEGQIKYVNDVR 615
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 616 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 669
>gi|432867047|ref|XP_004071010.1| PREDICTED: uncharacterized protein LOC101175080 [Oryzias latipes]
Length = 1421
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VLSLF GI + L LG +++ ++ +I + + + +G + DV+
Sbjct: 1140 LKVLSLFDGIATGYLVLKHLGFKIERYIASEICDDSIAV-----GMIKHEGKIEYVNDVR 1194
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + + +G FDL+IGGSPCN+LA N + R GL LF++++RIL+L++
Sbjct: 1195 TITRKHLAE----WGPFDLLIGGSPCNDLATVNPN-RKGLYEGTGRLFFEFYRILNLLR 1248
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 36/201 (17%)
Query: 243 PEAAAGPPYFY-YENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIK 301
P P+F+ +ENV I RFL + P +D+ A R R + NLP
Sbjct: 1249 PREEDNRPFFWLFENVVHMNSRDKTDICRFL-ECNPVLIDAIDVSPAHRARYFWGNLP-- 1305
Query: 302 NRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHL-NCLQTCIASAKLTERIRKALEECDGE 360
+SR+ S D + +L +CL+ I +++R + +
Sbjct: 1306 -----------------GMSRRVATSLDDKVNLQDCLE--IGRVAKFDKVRTITTKTN-- 1344
Query: 361 PEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKS 420
M + + L + K L E+E++ GFPK++T +SR R +
Sbjct: 1345 ----------CMRQGKTGQLPVIMNGKDDSLWCTEMELIFGFPKHYTDVNNMSRMQRQRV 1394
Query: 421 LGNSFQVDTVAYHLSVLKEMY 441
LG S+ V + + L+ LK+ Y
Sbjct: 1395 LGRSWSVPVIRHLLAPLKDYY 1415
>gi|289657684|gb|ADD14583.1| DNA methyltransferase 3B [Anolis carolinensis]
Length = 852
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG++++ V+ +I E + VR +G + D
Sbjct: 574 IRVLSLFDGIATGYLVLRDLGIKVEKYVASEICEESIAVGTVR-------HEGNITYVHD 626
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
V+ N ++ I+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+
Sbjct: 627 VR----NITKRNIDEWGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYHLLNYS 681
Query: 563 K 563
+
Sbjct: 682 R 682
>gi|51556273|ref|NP_001003959.1| DNA (cytosine-5)-methyltransferase 3B [Rattus norvegicus]
gi|50539393|tpe|CAE52319.1| TPA: putative DNA (cytosine-5) methyltransferase 3b [Rattus
norvegicus]
gi|149030965|gb|EDL85992.1| rCG37517, isoform CRA_a [Rattus norvegicus]
Length = 859
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ + + +G + DV+
Sbjct: 581 IRVLSLFDGIATGYLVLKDLGIKVEKYVASEVCAESIAV-----GTIKHEGQIKYVNDVR 635
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 636 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 689
>gi|340375074|ref|XP_003386062.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3A-like [Amphimedon
queenslandica]
Length = 984
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 11/123 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VL LF GIG + L LG+ ++ ++ +I + R + +I ++
Sbjct: 636 MRVLGLFDGIGTGLLVLKELGINVEVYIASEIDPDAIKVSRI------KHPEIIHVGAIE 689
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
Q+ E+ + ++G FDLV GGSPCN+L+ N +R G+ LF+++FRIL K
Sbjct: 690 QV----TEKEVRSWGPFDLVFGGSPCNDLSIVN-PARKGIYDGTGKLFFEFFRILSYAKP 744
Query: 565 MMQ 567
Q
Sbjct: 745 QPQ 747
>gi|327289287|ref|XP_003229356.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B, partial [Anolis
carolinensis]
Length = 418
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ +I E + + +G + DV+
Sbjct: 142 IRVLSLFDGIATGYLVLRDLGIKVEKYVASEICEESIAV-----GTVRHEGNITYVHDVR 196
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+ I++ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+
Sbjct: 197 NITKRNIDE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYHLLN 247
>gi|449281919|gb|EMC88864.1| DNA (cytosine-5)-methyltransferase 3A, partial [Columba livia]
Length = 563
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 64/117 (54%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 285 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 337
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ N ++ I +G FDL +GGSPCN+L+ N +R GL LF++++R+L
Sbjct: 338 VR----NVTQKHIQEWGPFDLGMGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 389
>gi|321467881|gb|EFX78869.1| Dpahnia pulex DNMT3 [Daphnia pulex]
Length = 480
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VLSLF GIG VAL +LG+ ++ + ++ + R T G L V
Sbjct: 197 LRVLSLFDGIGTGLVALRKLGIEVEVYYASEVLTAAATVSR-----TRLGGVLHHIGSVG 251
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGK-ESSLFYDYFRILDLVK 563
++ R+E++ L+IGGSPCN+ + NR +D + + S F+D+ R+L+L++
Sbjct: 252 EVTQQRLEEI----SPIHLLIGGSPCNDFSAINRFPKDFYDPRGYSRYFFDFVRVLNLMR 307
Query: 564 NM 565
+
Sbjct: 308 KI 309
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 85/187 (45%), Gaps = 28/187 (14%)
Query: 252 FYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPP 311
+ +ENVA P+ +TISR L D +P +D+K F R+R + N+P H L
Sbjct: 318 WLFENVASMPQHYRETISRHL-DCQPAVIDAKNFSPQLRRRLFWGNIPGLFTVHEQQLTQ 376
Query: 312 QNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFV 371
E+L L + P+ R+ ++T + ++ E CD
Sbjct: 377 DG--ESLSLEKSLMPNSGRRAAQEKIRT--LTTNTNSLLQGRTENCDE------------ 420
Query: 372 MDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVA 431
D+ + +++W+ E+E + G P++ T G +SRTDR K LG+++ V +A
Sbjct: 421 -DDNLQTDVLWL----------QEIEHVFGLPRHFTDVGNMSRTDRQKLLGHAWSVPVIA 469
Query: 432 YHLSVLK 438
S LK
Sbjct: 470 SIFSNLK 476
>gi|344244168|gb|EGW00272.1| DNA (cytosine-5)-methyltransferase 3B [Cricetulus griseus]
Length = 646
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ + + +G + DV+
Sbjct: 431 IRVLSLFDGIATGYLVLKELGIKVEKYVASEVCTESIAV-----GTVKHEGQIKYVDDVR 485
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ I++ +G FDLVIGGSPCN+L+ N R GL LF++++R+L+ +
Sbjct: 486 NITKGNIDE----WGPFDLVIGGSPCNDLSCVN-PGRKGLFEGTGRLFFEFYRLLNYAR 539
>gi|901818|gb|AAA69959.1| 5C-DNA methyltransferase [Bacillus phage H2]
Length = 503
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 25/121 (20%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWW------EQTNQKGTLI 498
+ V+SLFSGIG E AL +GV + V SE+++ ++S+ EQ+N
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVEYE---LVGFSEIDKYAIKSYCAIHNVDEQSN------ 54
Query: 499 DFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
F DV ++D ++ + FDL++GGSPC + S R R G E +LF+ Y
Sbjct: 55 -FGDVSKIDKKKLPE-------FDLLVGGSPCQSF--SVRGYRKGFEDTRGTLFFQYIDT 104
Query: 559 L 559
L
Sbjct: 105 L 105
>gi|148674093|gb|EDL06040.1| mCG140755 [Mus musculus]
Length = 637
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 14/118 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ ++ ++ ++ GT+ ++
Sbjct: 422 IRVLSLFDGIATGYLVLKELGIKVEKYIASEVCA-----------ESIAVGTVKHEGQIK 470
Query: 505 QLD--ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+D N ++ I+ +G FDLVIGGSPCN+L+ N R GL LF++++R+L+
Sbjct: 471 YVDDIRNITKEHIDEWGPFDLVIGGSPCNDLSCVN-PVRKGLFEGTGRLFFEFYRLLN 527
>gi|355751166|gb|EHH55421.1| hypothetical protein EGM_04630 [Macaca fascicularis]
Length = 982
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 28/131 (21%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 665 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 717
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKE-------------- 548
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL G++
Sbjct: 718 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYGRQPQLMAFSSDLSEGT 772
Query: 549 SSLFYDYFRIL 559
LF++++R+L
Sbjct: 773 GRLFFEFYRLL 783
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 47/225 (20%)
Query: 237 IVHRSLPEAAAGPPYFY-YENVALAPKGVWDT--ISRFLYDVEPEFVDSKYFCAAARKRG 293
++H + P+ P+F+ +ENV GV D ISRFL + P +D+K AA R R
Sbjct: 782 LLHDARPKEGDDRPFFWLFENVVAM--GVSDKRDISRFL-ESNPVMIDAKEVSAAHRARY 838
Query: 294 YVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKA 353
+ NLP NR PL+ T + LQ C+ ++ + +
Sbjct: 839 FWGNLPGMNR---------------PLA-------STVNDKLELQECLEHGRIAKETVQG 876
Query: 354 LEECDGEPE--------PPHHVQKFVMDECRKWNLVWVGRNKLAP---------LEPDEV 396
G+PE P + V + N + G+++ P L E+
Sbjct: 877 --HAAGQPEEGPGLLAFSPSSLFSKVRTITTRSNSIKQGKDQHFPVFMNEKEDILWCTEM 934
Query: 397 EMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMY 441
E + GFP ++T +SR R + LG S+ V + + + LKE +
Sbjct: 935 ERVFGFPVHYTDVSNMSRLARQRLLGRSWSVPVIRHLFAPLKEYF 979
>gi|338719203|ref|XP_001916549.2| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
3B [Equus caballus]
Length = 850
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + E+ K + D+
Sbjct: 570 IRVLSLFDGIATGYLVLKELGIKVXKYVASEVCEESIAVGSLKHERQLSKXCXMTSRDIT 629
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + I +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 630 KRN-------IEEWGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 680
>gi|355565519|gb|EHH21948.1| hypothetical protein EGK_05123 [Macaca mulatta]
Length = 957
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 28/131 (21%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 640 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 692
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKE-------------- 548
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL G++
Sbjct: 693 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYGRQPQLMAFSSDLSEGT 747
Query: 549 SSLFYDYFRIL 559
LF++++R+L
Sbjct: 748 GRLFFEFYRLL 758
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 47/225 (20%)
Query: 237 IVHRSLPEAAAGPPYFY-YENVALAPKGVWDT--ISRFLYDVEPEFVDSKYFCAAARKRG 293
++H + P+ P+F+ +ENV GV D ISRFL + P +D+K AA R R
Sbjct: 757 LLHDARPKEGDDRPFFWLFENVVAM--GVSDKRDISRFL-ESNPVMIDAKEVSAAHRARY 813
Query: 294 YVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKA 353
+ NLP NR PL+ T + LQ C+ ++ + +
Sbjct: 814 FWGNLPGMNR---------------PLA-------STVNDKLELQECLEHGRIAKETVQG 851
Query: 354 LEECDGEPE--------PPHHVQKFVMDECRKWNLVWVGRNKLAP---------LEPDEV 396
G+PE P + V + N + G+++ P L E+
Sbjct: 852 --HAAGQPEEGPGLLAFSPSSLFSKVRTITTRSNSIKQGKDQHFPVFMNEKEDILWCTEM 909
Query: 397 EMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMY 441
E + GFP ++T +SR R + LG S+ V + + + LKE +
Sbjct: 910 ERVFGFPVHYTDVSNMSRLARQRLLGRSWSVPVIRHLFAPLKEYF 954
>gi|302793528|ref|XP_002978529.1| hypothetical protein SELMODRAFT_418208 [Selaginella moellendorffii]
gi|300153878|gb|EFJ20515.1| hypothetical protein SELMODRAFT_418208 [Selaginella moellendorffii]
Length = 424
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 278 EFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCL 337
E V+SK+FCAA+R+RGYVHNLP +P P I E +P P WD R LNC+
Sbjct: 345 ELVNSKWFCAASRQRGYVHNLPA------LPPGPMTIQELVPGMENVRPPWDKRVKLNCI 398
Query: 338 QT 339
T
Sbjct: 399 TT 400
>gi|66392182|ref|NP_001018144.1| DNA (cytosine-5-)-methyltransferase 3 alpha a [Danio rerio]
gi|62433269|dbj|BAD95482.1| DNA methyltransferase [Danio rerio]
Length = 852
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ V+ ++ E + +VR + ++ T + D
Sbjct: 575 IRVLSLFDGIATGLLVLKDLGIQVDRYVASEVCEDSITVGMVRHF-----ERITYV--GD 627
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 628 IRNITRKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLFEGTGRLFFEFYRLL 679
>gi|1171045|sp|P09915.2|MTBR_BPRH1 RecName: Full=Modification methylase Rho11sI; Short=M.Rho11sI;
AltName: Full=Bsu P11s; AltName: Full=Cytosine-specific
methyltransferase Rho11sI
gi|579194|emb|CAA28869.1| unnamed protein product [Bacillus phage rho11s]
Length = 503
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIG E AL +GV + V SE+++ ++S+ N L +F DV
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVEYE---LVGFSEIDKYAIKSYCAIHNADEQL-NFGDVS 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++D ++ + FDL++GGSPC + + + R G E +LF+ Y L
Sbjct: 60 KIDKKKLPE-------FDLLVGGSPCQSFSVAG--YRKGFEDTRGTLFFQYIDTL 105
>gi|410900256|ref|XP_003963612.1| PREDICTED: uncharacterized protein LOC101061553 [Takifugu rubripes]
Length = 1374
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG +++ ++ +I E + + +G + DV+
Sbjct: 1096 IRVLSLFDGIATGYLVLKNLGFKIERYIASEICEDSIAV-----GMVKHEGKIEYVNDVR 1150
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + + +G FDL+IGGSPCN+L+ N R GL LF++++RIL ++K
Sbjct: 1151 TITKKHLAE----WGPFDLLIGGSPCNDLSMVN-PLRKGLFEGTGRLFFEFYRILTMLK 1204
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 81/202 (40%), Gaps = 38/202 (18%)
Query: 243 PEAAAGPPYFY-YENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIK 301
P+ P+F+ +ENV ISRFL + P +D+ A R R + N+P
Sbjct: 1205 PKEGDNRPFFWLFENVVFMSANDKSDISRFL-ECNPVLIDAVKVSPAHRARYFWGNIPGM 1263
Query: 302 NRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLT--ERIRKALEECDG 359
NR PL + L LQ C+ S + +++R + +
Sbjct: 1264 NR----PLATAVEKKVL------------------LQDCLESGRTAKFDKVRTITTKSNS 1301
Query: 360 EPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYK 419
+ M+ K + +W E+E + GFPK++T + RT R K
Sbjct: 1302 IRQGKTGPLPVNMNG--KDDYLWC----------TELEQIFGFPKHYTDVNNMGRTQRQK 1349
Query: 420 SLGNSFQVDTVAYHLSVLKEMY 441
+LG S+ V + + + LK+ Y
Sbjct: 1350 ALGRSWSVPVIRHLFAPLKDYY 1371
>gi|339248137|ref|XP_003375702.1| putative PWWP domain protein [Trichinella spiralis]
gi|316970903|gb|EFV54759.1| putative PWWP domain protein [Trichinella spiralis]
Length = 613
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 12/117 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI ++AL LG+ ++ S +I + + + N + ++ DV+
Sbjct: 326 IRVLSLFDGIATGKIALDELGINIEIYYSCEIDQEALLVTK-----VNHENQIVYLGDVR 380
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS--LFYDYFRIL 559
+ ++E++ DL+IGGSPCN+++ +N R GL E + LF++YFRIL
Sbjct: 381 GITREKLEEI----SPIDLLIGGSPCNDVSIANPKRR-GLYDPEGTGILFFEYFRIL 432
>gi|190337628|gb|AAI63546.1| Dnmt7 protein [Danio rerio]
Length = 1456
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG +++ ++ +I E + + +G + DV+
Sbjct: 1178 IRVLSLFDGIATGYLVLKDLGFKLERYIASEICEDSIAV-----GMVKHEGKIEYVKDVR 1232
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + + +G FDL+IGGSPCN+L+ N +R GL LF++Y+R+L +++
Sbjct: 1233 TITRKHLAE----WGPFDLLIGGSPCNDLSMVN-PARKGLFEGTGRLFFEYYRMLTMMR 1286
>gi|410898998|ref|XP_003962984.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Takifugu
rubripes]
Length = 876
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 14/121 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG ++ V+ ++ E ++ +VR +G + D
Sbjct: 598 IRVLSLFDGIATGYLVLRDLGFKVDLYVASEVCEDSISVGVVR-------HEGKIKYVHD 650
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
V+ + I + +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 651 VRDITKKNILE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLLSEA 705
Query: 563 K 563
K
Sbjct: 706 K 706
>gi|392339640|ref|XP_003753864.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
3B-like [Rattus norvegicus]
Length = 743
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 14/118 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ + + GT+ ++
Sbjct: 465 IRVLSLFDGIATGYLVLKDLGIKVEKYVASEVCADSIAV-----------GTIKHEGQIK 513
Query: 505 QLD--ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+D N ++ I+ +G FDLVIGGSPCN+L+ N R GL LF++++R+L+
Sbjct: 514 YVDDIQNIAKEHIDEWGPFDLVIGGSPCNDLSCVN-PIRKGLFEGTGRLFFEFYRLLN 570
>gi|66472506|ref|NP_001018312.1| DNA (cytosine-5-)-methyltransferase 3 beta [Danio rerio]
gi|62433267|dbj|BAD95481.1| DNA methyltransferase [Danio rerio]
Length = 1433
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG +++ ++ +I E + + +G + DV+
Sbjct: 1155 IRVLSLFDGIATGYLVLKDLGFKLERYIASEICEDSIAV-----GMVKHEGKIEYVKDVR 1209
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + + +G FDL+IGGSPCN+L+ N +R GL LF++Y+R+L +++
Sbjct: 1210 TITRKHLAE----WGPFDLLIGGSPCNDLSMVN-PARKGLFEGTGRLFFEYYRMLTMMR 1263
>gi|392346844|ref|XP_003749649.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
3B-like [Rattus norvegicus]
Length = 799
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ + + +G + D+Q
Sbjct: 512 IRVLSLFDGIATGYLVLKDLGIKVEKYVASEVCADSIAV-----GTIKHEGQIKYVDDIQ 566
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
N ++ I+ +G FDLVIGGSPCN+L+ N R GL LF++++R+L+
Sbjct: 567 ----NIAKEHIDEWGPFDLVIGGSPCNDLSCVN-PIRKGLFEGTGRLFFEFYRLLN 617
>gi|432960288|ref|XP_004086449.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Oryzias
latipes]
Length = 824
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 14/121 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG ++ V+ ++ + ++ +VR +G + D
Sbjct: 546 IRVLSLFDGIATGYLVLRDLGFKVDQYVASEVCQDSISVGVVR-------HEGKIQYVHD 598
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
V+ + I + +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 599 VRNITKKNILE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLLSEA 653
Query: 563 K 563
K
Sbjct: 654 K 654
>gi|149030964|gb|EDL85991.1| rCG37512 [Rattus norvegicus]
Length = 461
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ V+ ++ + + +G + D+Q
Sbjct: 246 IRVLSLFDGIATGYLVLKDLGIKVEKYVASEVCADSIAV-----GTIKHEGQIKYVDDIQ 300
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
N ++ I+ +G FDLVIGGSPCN+L+ N R GL LF++++R+L+ +
Sbjct: 301 ----NIAKEHIDEWGPFDLVIGGSPCNDLSCVN-PIRKGLFEGTGRLFFEFYRLLNYSR 354
>gi|240851538|ref|NP_001155876.1| DNA (cytosine-5)-methyltransferase 3B [Sus scrofa]
gi|226222434|gb|ACO38648.1| DNA methyltransferase 3B [Sus scrofa]
Length = 852
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 10/120 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSL GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 574 IRVLSLLDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 628
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ ++
Sbjct: 629 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEHYHLLNYSRS 683
>gi|194389448|dbj|BAG61690.1| unnamed protein product [Homo sapiens]
Length = 694
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 10/117 (8%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
VLSLF GI + L LG+++ V+ ++ E + + +G + DV+ +
Sbjct: 481 VLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVRNI 535
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
IE+ +G FDLVIGGSPCN+L N +R GL LF++++ +L+ +
Sbjct: 536 TKKNIEE----WGPFDLVIGGSPCNDLPNVN-PARKGLYEGTGRLFFEFYHLLNYSR 587
>gi|414864328|tpg|DAA42885.1| TPA: hypothetical protein ZEAMMB73_589132 [Zea mays]
Length = 177
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 18/149 (12%)
Query: 29 LILEALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSA 88
+ A K + + + + L+ ++ MGF+ ++V KA+++NG+ DS++E LLTY
Sbjct: 4 FVCGAAFKVANGNGKAGPSASLVQKYMDMGFTEEIVRKAMKDNGDNGADSLVELLLTYQE 63
Query: 89 LGQ---------SSQAEQHINSDQNSPEL---DGSFLDGFSDT------DSFEGEEITNP 130
LG S A Q ++ + L D DG T D E E+ N
Sbjct: 64 LGNDLKVDNGFASGCAPQTVDDSDDDDILENWDDEDADGGRSTRVANSIDDSEDEDFLNE 123
Query: 131 DPDKEEKLVSLASMGYSVQEASIAMERCG 159
K++K+ SL MG+ EA++A+ RCG
Sbjct: 124 MSQKDKKVDSLVKMGFPEDEAALAITRCG 152
>gi|194706066|gb|ACF87117.1| unknown [Zea mays]
Length = 177
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 18/149 (12%)
Query: 29 LILEALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSA 88
+ A K + + + + L+ ++ MGF+ ++V KA+++NG+ DS++E LLTY
Sbjct: 4 FVCGAAFKVANGNGKAGPSASLVQKYMDMGFTEEIVRKAMKDNGDNGADSLVELLLTYQE 63
Query: 89 LGQ---------SSQAEQHINSDQNSPEL---DGSFLDGFSDT------DSFEGEEITNP 130
LG S A Q ++ + L D DG T D E E+ N
Sbjct: 64 LGNDLKVDNGFASGCAPQTVDDSDDDDILENWDDEDADGGRSTRVANSIDDSEDEDFLNE 123
Query: 131 DPDKEEKLVSLASMGYSVQEASIAMERCG 159
K++K+ SL MG+ EA++A+ RCG
Sbjct: 124 MSQKDKKVDSLVKMGFPEDEAALAITRCG 152
>gi|194389584|dbj|BAG61753.1| unnamed protein product [Homo sapiens]
Length = 728
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF I + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 513 IRVLSLFDDIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 567
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 568 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 621
>gi|216171|gb|AAA32604.1| DNA methyltransferase [Bacillus phage SPR]
Length = 439
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIG E AL +GV + V SE+++ V+S+ N L +F DV
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVGYE---LVGFSEIDKYAVKSFCAIHNVDEQL-NFGDVS 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++D ++ + FDL++GGSPC + + + R G E +LF+ Y L
Sbjct: 60 KIDKKKLPE-------FDLLVGGSPCQSFSVAGH--RKGFEDTRGTLFFQYVETL 105
>gi|127431|sp|P00476.1|MTBS_BPSPR RecName: Full=Modification methylase SPRI; Short=M.SPRI; AltName:
Full=Cytosine-specific methyltransferase SPRI
gi|224091|prf||1010250A methyltransferase
Length = 439
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIG E AL +GV + V SE+++ V+S+ N L +F DV
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVGYE---LVGFSEIDKYAVKSFCAIHNVDEQL-NFGDVS 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++D ++ + FDL++GGSPC + + + R G E +LF+ Y L
Sbjct: 60 KIDKKKLPE-------FDLLVGGSPCQSFSVAGH--RKGFEDTRGTLFFQYVETL 105
>gi|345808363|gb|AEO16873.1| DNA (cytosine-5-)-methyltransferase 7 [Carassius auratus]
Length = 1459
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG ++ ++ +I E + + +G + DV+
Sbjct: 1181 IRVLSLFDGIATGYLVLKDLGFKLGRYIASEICEDSIAV-----GMIKHEGLVEYVKDVR 1235
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + + +G FDL+IGGSPCN+L+ N +R GL LF++Y+R+L +++
Sbjct: 1236 TITRKHLAE----WGPFDLLIGGSPCNDLSMVN-PARKGLFEGTGRLFFEYYRMLTMMR 1289
>gi|384158938|ref|YP_005541011.1| SP-beta prophage DNA (cytosine-5-)-methyltransferase [Bacillus
amyloliquefaciens TA208]
gi|384167980|ref|YP_005549358.1| 5C-DNA methyltransferase [Bacillus amyloliquefaciens XH7]
gi|328553026|gb|AEB23518.1| SP-beta prophage DNA (cytosine-5-)-methyltransferase [Bacillus
amyloliquefaciens TA208]
gi|341827259|gb|AEK88510.1| 5C-DNA methyltransferase [Bacillus amyloliquefaciens XH7]
Length = 503
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 25/121 (20%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWW------EQTNQKGTLI 498
+ V+SLFSGIG E AL +GV + V SE+++ ++S+ EQ+N
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVEYE---LVGFSEIDKYAIKSYCAIHNVDEQSN------ 54
Query: 499 DFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
F DV ++D ++ + FDL++GGSPC + + + R G E +LF+ Y
Sbjct: 55 -FGDVSKIDKKKLPE-------FDLLVGGSPCQSFSVAG--YRKGFEDTRGTLFFQYIDT 104
Query: 559 L 559
L
Sbjct: 105 L 105
>gi|348503201|ref|XP_003439154.1| PREDICTED: hypothetical protein LOC100696323 [Oreochromis niloticus]
Length = 1394
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ ++ +I + + + +G + DV+
Sbjct: 1116 IKVLSLFDGIATGYLVLKDLGLKIERYIASEICDDSIAV-----GMVKHEGKIEYVNDVR 1170
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + + +G FDL+IGGSPCN+L+ N + EG LF++++RIL L++
Sbjct: 1171 TITRKHLAE----WGPFDLLIGGSPCNDLSMVNPLRKGLFEGT-GRLFFEFYRILTLLR 1224
>gi|345517634|ref|ZP_08797100.1| site-specific DNA methylase [Bacteroides sp. 4_3_47FAA]
gi|423218473|ref|ZP_17204969.1| DNA (cytosine-5-)-methyltransferase [Bacteroides caccae CL03T12C61]
gi|423287679|ref|ZP_17266530.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus CL02T12C04]
gi|423306164|ref|ZP_17284163.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T00C23]
gi|423309287|ref|ZP_17287277.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T12C37]
gi|254836742|gb|EET17051.1| site-specific DNA methylase [Bacteroides sp. 4_3_47FAA]
gi|392627976|gb|EIY22011.1| DNA (cytosine-5-)-methyltransferase [Bacteroides caccae CL03T12C61]
gi|392671694|gb|EIY65165.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus CL02T12C04]
gi|392679176|gb|EIY72564.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T00C23]
gi|392684966|gb|EIY78285.1| DNA (cytosine-5-)-methyltransferase [Bacteroides uniformis
CL03T12C37]
Length = 420
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 36/141 (25%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VLSLF G+ ++AL RLG+R + + SE++R+ +R Q N T I DV
Sbjct: 1 MKVLSLFDGMSCGQIALKRLGIRTETYYA---SEIDRHAIRQ--TQLNFPDT-IQLGDVT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHS--------------------RDG- 543
Q+D ++E + DL+IGGSPC + + + + + R+G
Sbjct: 55 QVDVRQLEPI-------DLLIGGSPCQSFSFAGKRAGMSTIDKEEIYTLKRYLELKREGF 107
Query: 544 -LEGKESSLFYDYFRILDLVK 563
EG ES LF++Y RIL ++
Sbjct: 108 LFEG-ESYLFWEYMRILTDIR 127
>gi|384164646|ref|YP_005546025.1| Modification methylase Rho11sI [Bacillus amyloliquefaciens LL3]
gi|328912201|gb|AEB63797.1| Modification methylase Rho11sI [Bacillus amyloliquefaciens LL3]
Length = 503
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 13/115 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIG E AL +GV + V SE+++ ++S+ N L ++ DV
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVEYE---LVGFSEIDKYAIKSYCAIHNVDEQL-NYGDVS 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++D + + FDL++GGSPC + + + R G E +LF+ Y L
Sbjct: 60 KIDKTFLPE-------FDLLVGGSPCQSFSVAGH--RKGFEDTRGTLFFQYIETL 105
>gi|70887603|ref|NP_001020621.1| DNA (cytosine-5)-methyltransferase 3B [Danio rerio]
gi|62433261|dbj|BAD95478.1| DNA methyltransferase [Danio rerio]
Length = 816
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG ++ ++ ++ E + ++ +G + DV+
Sbjct: 538 IRVLSLFDGIATGYLVLRDLGFKVDLYIASEVCEDSISV-----GAVRHEGKIQYVHDVR 592
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ I + +G FD+VIGGSPCN+L+ N +R GL LF++++R+L K
Sbjct: 593 NITRKNIAE----WGPFDMVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLLSEAK 646
>gi|115313010|gb|AAI24099.1| DNA (cytosine-5-)-methyltransferase 4 [Danio rerio]
Length = 816
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 14/121 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG ++ ++ ++ E ++ VR +G + D
Sbjct: 538 IRVLSLFDGIATGYLVLRDLGFKVDLYIASEVCEDSISVGAVR-------HEGKIQYVHD 590
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
V+ + I + +G FD+VIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 591 VRNITRKNIAE----WGPFDMVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLLSEA 645
Query: 563 K 563
K
Sbjct: 646 K 646
>gi|167758237|ref|ZP_02430364.1| hypothetical protein CLOSCI_00575 [Clostridium scindens ATCC 35704]
gi|167664134|gb|EDS08264.1| DNA (cytosine-5-)-methyltransferase [Clostridium scindens ATCC
35704]
Length = 418
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VLSLF GI +VAL R G++++ V+ +I + I + Q+G DV
Sbjct: 21 MKVLSLFDGISCGKVALERAGIQIEEYVAFEIDKYAIKISKKNHPDIIQRG------DVT 74
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ D + F GFD+VIGGSPC + + + E S LF+++ R ++ VK
Sbjct: 75 KAD-------FSEFEGFDIVIGGSPCQGFSFAGKQLN--FEDPRSKLFFEFVRAVEQVK 124
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 388 LAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLK 438
+ L P E E L P N+T G++ RYK LGN + VD +A+ L LK
Sbjct: 301 IRKLTPVECERLQTLPDNYTDAPGVTDAQRYKCLGNGWTVDVIAHILKGLK 351
>gi|398307353|ref|ZP_10510939.1| Modification methylase Rho11sI [Bacillus vallismortis DV1-F-3]
Length = 422
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 13/115 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIG E AL +GV + V SE+++ ++S+ N L ++ DV
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVEYE---LVGFSEIDKYAIKSYCAIHNVDEQL-NYGDVS 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++D + + FDL++GGSPC + + + R G E +LF+ Y L
Sbjct: 60 KIDKTFLPE-------FDLLVGGSPCQSFSIAGH--RRGFEDTRGTLFFQYIETL 105
>gi|15676724|ref|NP_273868.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis MC58]
gi|385328153|ref|YP_005882456.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis
alpha710]
gi|385851511|ref|YP_005898026.1| DNA-cytosine methyltransferase [Neisseria meningitidis M04-240196]
gi|416172551|ref|ZP_11608744.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304]
gi|416197351|ref|ZP_11618561.1| DNA-cytosine methyltransferase [Neisseria meningitidis CU385]
gi|427827660|ref|ZP_18994689.1| modification methylase HpaII [Neisseria meningitidis H44/76]
gi|433511088|ref|ZP_20467920.1| modification methylase HpaII [Neisseria meningitidis 4119]
gi|7226061|gb|AAF41239.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis MC58]
gi|308389005|gb|ADO31325.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis
alpha710]
gi|316984499|gb|EFV63467.1| modification methylase HpaII [Neisseria meningitidis H44/76]
gi|325129944|gb|EGC52743.1| DNA-cytosine methyltransferase [Neisseria meningitidis OX99.30304]
gi|325140023|gb|EGC62552.1| DNA-cytosine methyltransferase [Neisseria meningitidis CU385]
gi|325206334|gb|ADZ01787.1| DNA-cytosine methyltransferase [Neisseria meningitidis M04-240196]
gi|389606087|emb|CCA45000.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis
alpha522]
gi|432248579|gb|ELL04004.1| modification methylase HpaII [Neisseria meningitidis 4119]
Length = 411
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 27/130 (20%)
Query: 442 PDG-INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV-------NRNIVRSWWEQTNQ 493
PD I + ++FSGIG E A HRL + V S DI N + +W
Sbjct: 34 PDSHIRLATVFSGIGAVEQAFHRLNLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHN--- 90
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFY 553
D+ Q DA + + D+++GGSPC A S R GLE +LFY
Sbjct: 91 --------DITQFDARKFRNQV------DILVGGSPCQ--AFSMVGKRAGLEDTRGTLFY 134
Query: 554 DYFRILDLVK 563
++ R++D V+
Sbjct: 135 EFARVVDEVQ 144
>gi|385853487|ref|YP_005900001.1| DNA-cytosine methyltransferase [Neisseria meningitidis H44/76]
gi|416213885|ref|ZP_11622578.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240013]
gi|433464805|ref|ZP_20422290.1| modification methylase HpaII [Neisseria meningitidis NM422]
gi|433488055|ref|ZP_20445223.1| modification methylase HpaII [Neisseria meningitidis M13255]
gi|433490174|ref|ZP_20447303.1| modification methylase HpaII [Neisseria meningitidis NM418]
gi|433504787|ref|ZP_20461727.1| modification methylase HpaII [Neisseria meningitidis 9506]
gi|433506843|ref|ZP_20463755.1| modification methylase HpaII [Neisseria meningitidis 9757]
gi|433508893|ref|ZP_20465766.1| modification methylase HpaII [Neisseria meningitidis 12888]
gi|325144138|gb|EGC66445.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240013]
gi|325200491|gb|ADY95946.1| DNA-cytosine methyltransferase [Neisseria meningitidis H44/76]
gi|432204292|gb|ELK60337.1| modification methylase HpaII [Neisseria meningitidis NM422]
gi|432224521|gb|ELK80286.1| modification methylase HpaII [Neisseria meningitidis M13255]
gi|432228082|gb|ELK83783.1| modification methylase HpaII [Neisseria meningitidis NM418]
gi|432242302|gb|ELK97826.1| modification methylase HpaII [Neisseria meningitidis 9506]
gi|432242632|gb|ELK98150.1| modification methylase HpaII [Neisseria meningitidis 9757]
gi|432247707|gb|ELL03142.1| modification methylase HpaII [Neisseria meningitidis 12888]
Length = 406
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 27/130 (20%)
Query: 442 PDG-INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV-------NRNIVRSWWEQTNQ 493
PD I + ++FSGIG E A HRL + V S DI N + +W
Sbjct: 29 PDSHIRLATVFSGIGAVEQAFHRLNLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHN--- 85
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFY 553
D+ Q DA + + D+++GGSPC A S R GLE +LFY
Sbjct: 86 --------DITQFDARKFRNQV------DILVGGSPCQ--AFSMVGKRAGLEDTRGTLFY 129
Query: 554 DYFRILDLVK 563
++ R++D V+
Sbjct: 130 EFARVVDEVQ 139
>gi|416162817|ref|ZP_11606826.1| DNA-cytosine methyltransferase [Neisseria meningitidis N1568]
gi|421542229|ref|ZP_15988339.1| cytosine-specific methyltransferase [Neisseria meningitidis NM255]
gi|421565026|ref|ZP_16010812.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3081]
gi|433473224|ref|ZP_20430588.1| modification methylase HpaII [Neisseria meningitidis 97021]
gi|433481774|ref|ZP_20439039.1| modification methylase HpaII [Neisseria meningitidis 2006087]
gi|433483759|ref|ZP_20440987.1| modification methylase HpaII [Neisseria meningitidis 2002038]
gi|433485959|ref|ZP_20443160.1| modification methylase HpaII [Neisseria meningitidis 97014]
gi|433536509|ref|ZP_20493017.1| modification methylase HpaII [Neisseria meningitidis 77221]
gi|325127899|gb|EGC50802.1| DNA-cytosine methyltransferase [Neisseria meningitidis N1568]
gi|402318165|gb|EJU53690.1| cytosine-specific methyltransferase [Neisseria meningitidis NM255]
gi|402345355|gb|EJU80472.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3081]
gi|432210825|gb|ELK66781.1| modification methylase HpaII [Neisseria meningitidis 97021]
gi|432217605|gb|ELK73473.1| modification methylase HpaII [Neisseria meningitidis 2006087]
gi|432221462|gb|ELK77272.1| modification methylase HpaII [Neisseria meningitidis 2002038]
gi|432223005|gb|ELK78787.1| modification methylase HpaII [Neisseria meningitidis 97014]
gi|432274459|gb|ELL29547.1| modification methylase HpaII [Neisseria meningitidis 77221]
Length = 411
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 59/130 (45%), Gaps = 27/130 (20%)
Query: 442 PDG-INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV-------NRNIVRSWWEQTNQ 493
PD I + ++FSGIG E A HRL + V S DI N + +W
Sbjct: 34 PDSHIRLATVFSGIGAVEQAFHRLNLNHTIVFSGDIDPYVKKSYLGNYKLNEDFWHN--- 90
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFY 553
D+ Q DA + + D+++GGSPC A S R GLE +LFY
Sbjct: 91 --------DITQFDARKFRNQV------DILVGGSPCQ--AFSMVGKRAGLEDTRGTLFY 134
Query: 554 DYFRILDLVK 563
++ R++D V+
Sbjct: 135 EFARVVDEVQ 144
>gi|2760954|gb|AAB95336.1| EaeI methyltransferase alpha subunit [Enterobacter aerogenes]
Length = 309
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V S F+GIGG ++ L + G M+ V +I++ + ++R W D+ QL
Sbjct: 11 VSSFFAGIGGFDLGLEKAG--MEVVFQCEINKFCQKVLRKNWPNVPLH------TDITQL 62
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+A+ I + GGF PC +++ +N+ R GLEG S LFY Y ++++
Sbjct: 63 NADEIPESSVWCGGF-------PCQDVSSANQGKRKGLEGARSGLFYTYAKLIE 109
>gi|47212796|emb|CAF96171.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2195
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
++ FSG + L LG +++ ++ ++ E + + N +G + DV+ +
Sbjct: 1856 IVLCFSGY----LVLKDLGFKVETYIASEVCEDSIAVA-----AVNHEGKITQVGDVRFI 1906
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ ++ ++ +G FDL+IGGSPCN+L+ N R GL LF++Y+RIL+L+K
Sbjct: 1907 N----QEQLHRWGPFDLLIGGSPCNDLSIVN-PIRKGLYEGTGRLFFEYYRILELLK 1958
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%)
Query: 459 VALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMIN 516
+ L LG ++ V+ ++ E ++ +VR +G + DV+ + I +
Sbjct: 493 LVLRDLGFKVDLYVASEVCEDSISVGVVR-------HEGKIKYVHDVRDITKKNIME--- 542
Query: 517 AFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+G FDLVIGGSPCN+L+ N +R GL LF++++R+L K
Sbjct: 543 -WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLLSEAK 587
>gi|406672487|ref|ZP_11079712.1| DNA (cytosine-5-)-methyltransferase [Bergeyella zoohelcum CCUG
30536]
gi|405587031|gb|EKB60759.1| DNA (cytosine-5-)-methyltransferase [Bergeyella zoohelcum CCUG
30536]
Length = 379
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 14/115 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+NVL LFSGIGG + L R G + SE+N++ V + + +D DVQ
Sbjct: 5 VNVLDLFSGIGGFSLGLERAGFEINKHY---FSEINKHSVACYRYRFPNA---MDLGDVQ 58
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
Q+++ I + I D++ GSPC + + + + R GLEG+ SSL + R++
Sbjct: 59 QINSETINERI------DIITFGSPCQDFSLAGK--RQGLEGERSSLIKEAMRLI 105
>gi|421563050|ref|ZP_16008872.1| cytosine-specific methyltransferase [Neisseria meningitidis NM2795]
gi|421906617|ref|ZP_16336510.1| Type II cytosine-5 DNA methyltransferase [Neisseria meningitidis
alpha704]
gi|393292365|emb|CCI72451.1| Type II cytosine-5 DNA methyltransferase [Neisseria meningitidis
alpha704]
gi|402341757|gb|EJU76930.1| cytosine-specific methyltransferase [Neisseria meningitidis NM2795]
Length = 389
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 27/130 (20%)
Query: 442 PDG-INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV-------NRNIVRSWWEQTNQ 493
PD I + ++FSGIG E A HRL + V + DI N + +W
Sbjct: 34 PDSHIRLATVFSGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHN--- 90
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFY 553
D+ Q DA + + D+++GGSPC A S R GLE +LFY
Sbjct: 91 --------DITQFDARKFRNQV------DILVGGSPCQ--AFSMVGKRAGLEDTRGTLFY 134
Query: 554 DYFRILDLVK 563
++ R++D V+
Sbjct: 135 EFARVVDEVQ 144
>gi|242035729|ref|XP_002465259.1| hypothetical protein SORBIDRAFT_01g035076 [Sorghum bicolor]
gi|241919113|gb|EER92257.1| hypothetical protein SORBIDRAFT_01g035076 [Sorghum bicolor]
Length = 75
Score = 57.4 bits (137), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 37/50 (74%)
Query: 383 VGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAY 432
VGR+KL PLEP +VE +LG+P NHT +++ DR+ ++ +FQ DT++Y
Sbjct: 7 VGRDKLGPLEPRQVERILGYPHNHTNLFELNQPDRFTAMKYAFQTDTLSY 56
>gi|218767941|ref|YP_002342453.1| modification methylase [Neisseria meningitidis Z2491]
gi|433479369|ref|ZP_20436663.1| modification methylase HpaII [Neisseria meningitidis 63041]
gi|433519546|ref|ZP_20476267.1| modification methylase HpaII [Neisseria meningitidis 65014]
gi|433540679|ref|ZP_20497134.1| modification methylase HpaII [Neisseria meningitidis 63006]
gi|6900408|emb|CAB72018.1| putative cytosine-specific methyltransferase [Neisseria
meningitidis]
gi|121051949|emb|CAM08255.1| putative modification methylase [Neisseria meningitidis Z2491]
gi|432217172|gb|ELK73041.1| modification methylase HpaII [Neisseria meningitidis 63041]
gi|432255537|gb|ELL10866.1| modification methylase HpaII [Neisseria meningitidis 65014]
gi|432277694|gb|ELL32740.1| modification methylase HpaII [Neisseria meningitidis 63006]
Length = 411
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 27/130 (20%)
Query: 442 PDG-INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV-------NRNIVRSWWEQTNQ 493
PD I + ++FSGIG E A HRL + V + DI N + +W
Sbjct: 34 PDSHIRLATVFSGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHN--- 90
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFY 553
D+ Q DA++ + D+++GGSPC A S R GLE +LFY
Sbjct: 91 --------DITQFDASKFRNQV------DILVGGSPCQ--AFSMVGKRAGLEDTRGTLFY 134
Query: 554 DYFRILDLVK 563
++ R++D V+
Sbjct: 135 EFARVVDEVQ 144
>gi|161869767|ref|YP_001598934.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442]
gi|161595320|gb|ABX72980.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis 053442]
Length = 411
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 27/130 (20%)
Query: 442 PDG-INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV-------NRNIVRSWWEQTNQ 493
PD I + ++FSGIG E A HRL + V + DI N + +W
Sbjct: 34 PDSHIRLATVFSGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHN--- 90
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFY 553
D+ Q DA++ + D+++GGSPC A S R GLE +LFY
Sbjct: 91 --------DITQFDASKFRNQV------DILVGGSPCQ--AFSMVGKRAGLEDTRGTLFY 134
Query: 554 DYFRILDLVK 563
++ R++D V+
Sbjct: 135 EFARVVDEVQ 144
>gi|421554581|ref|ZP_16000522.1| cytosine-specific methyltransferase [Neisseria meningitidis 98008]
gi|402332541|gb|EJU67866.1| cytosine-specific methyltransferase [Neisseria meningitidis 98008]
Length = 406
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 27/130 (20%)
Query: 442 PDG-INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV-------NRNIVRSWWEQTNQ 493
PD I + ++FSGIG E A HRL + V + DI N + +W
Sbjct: 29 PDSHIRLATVFSGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHN--- 85
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFY 553
D+ Q DA++ + D+++GGSPC A S R GLE +LFY
Sbjct: 86 --------DITQFDASKFRNQV------DILVGGSPCQ--AFSMVGKRAGLEDTRGTLFY 129
Query: 554 DYFRILDLVK 563
++ R++D V+
Sbjct: 130 EFARVVDEVQ 139
>gi|421540001|ref|ZP_15986154.1| cytosine-specific methyltransferase [Neisseria meningitidis 93004]
gi|402320285|gb|EJU55776.1| cytosine-specific methyltransferase [Neisseria meningitidis 93004]
Length = 406
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 27/130 (20%)
Query: 442 PDG-INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV-------NRNIVRSWWEQTNQ 493
PD I + ++FSGIG E A HRL + V + DI N + +W
Sbjct: 29 PDSHIRLATVFSGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHN--- 85
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFY 553
D+ Q DA++ + D+++GGSPC A S R GLE +LFY
Sbjct: 86 --------DITQFDASKFRNQV------DILVGGSPCQ--AFSMVGKRAGLEDTRGTLFY 129
Query: 554 DYFRILDLVK 563
++ R++D V+
Sbjct: 130 EFARVVDEVQ 139
>gi|285017024|ref|YP_003374735.1| DNA (cytosine-5-)-methyltransferase [Xanthomonas albilineans GPE
PC73]
gi|283472242|emb|CBA14748.1| putative dna (cytosine-5-)-methyltransferase protein [Xanthomonas
albilineans GPE PC73]
Length = 429
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 18/136 (13%)
Query: 433 HLSVLKEMYPDGINV---LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWE 489
H+S + Y +G NV LSLFSG+ A +AL LG V +D + ++R
Sbjct: 2 HVSSSRSAY-EGSNVMRYLSLFSGLEAAHLALSPLGWECVGVAEIDAAACA--LLRHRLP 58
Query: 490 QTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKES 549
G + + D +I G D+VIGGSPC +L+ + + R GL G S
Sbjct: 59 HVPNLGNVTEITDA----------VIAQLGAIDVVIGGSPCQDLSVAGK--RAGLAGARS 106
Query: 550 SLFYDYFRILDLVKNM 565
SLF++ RI +
Sbjct: 107 SLFHEQLRIFHAARTF 122
>gi|452821246|gb|EME28279.1| DNA (cytosine-5-)-methyltransferase [Galdieria sulphuraria]
Length = 455
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 62/125 (49%), Gaps = 15/125 (12%)
Query: 439 EMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLI 498
E P I V S F GI A +AL RLG+ V SE++ +R + +I
Sbjct: 225 EFTPQMI-VFSAFDGIAAARLALQRLGIVH---VRYYASEIDSKAIRV---AHTRFPDII 277
Query: 499 DFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
D++Q+ I + G D +IGGSPC +L+ R G++ SSLF++Y R+
Sbjct: 278 SLGDIRQVSKRDIPE------GVDFMIGGSPCQSLSRLGRQR--GIQSGPSSLFFEYVRL 329
Query: 559 LDLVK 563
L+ +K
Sbjct: 330 LEELK 334
>gi|301020988|ref|ZP_07185039.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1]
gi|3660493|emb|CAA57706.1| M.EcoHK31I alpha polypeptide [Escherichia coli]
gi|300398362|gb|EFJ81900.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli MS 69-1]
Length = 309
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 61/114 (53%), Gaps = 15/114 (13%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V S F+GIGG ++ L + G M+ V +I++ + ++R W + D+ +L
Sbjct: 11 VSSFFAGIGGFDLGLEKAG--MEVVFQCEINKFCQKVLRKNWSKVPLH------TDITRL 62
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+A+ I + ++ GG PC +++ +N+ R GLEG S LFY Y ++++
Sbjct: 63 NADEIPES-------NVWCGGFPCQDVSSANQGKRKGLEGARSGLFYTYAKLIE 109
>gi|304387865|ref|ZP_07370039.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC
13091]
gi|385324428|ref|YP_005878867.1| putative type II restriction-modification system enzyme Mod
[Neisseria meningitidis 8013]
gi|385337776|ref|YP_005891649.1| putative type II restriction-modification system enzyme Mod
[Neisseria meningitidis WUE 2594]
gi|385854962|ref|YP_005901475.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240355]
gi|416183674|ref|ZP_11612687.1| DNA-cytosine methyltransferase [Neisseria meningitidis M13399]
gi|418288047|ref|ZP_12900568.1| DNA-cytosine methyltransferase [Neisseria meningitidis NM233]
gi|418290308|ref|ZP_12902473.1| DNA-cytosine methyltransferase [Neisseria meningitidis NM220]
gi|421537848|ref|ZP_15984030.1| cytosine-specific methyltransferase [Neisseria meningitidis 93003]
gi|421544193|ref|ZP_15990271.1| cytosine-specific methyltransferase [Neisseria meningitidis NM140]
gi|421546303|ref|ZP_15992352.1| cytosine-specific methyltransferase [Neisseria meningitidis NM183]
gi|421548572|ref|ZP_15994597.1| cytosine-specific methyltransferase [Neisseria meningitidis NM2781]
gi|421550374|ref|ZP_15996379.1| cytosine-specific methyltransferase [Neisseria meningitidis 69166]
gi|421552597|ref|ZP_15998571.1| cytosine-specific methyltransferase [Neisseria meningitidis NM576]
gi|421557042|ref|ZP_16002951.1| cytosine-specific methyltransferase [Neisseria meningitidis 80179]
gi|421558765|ref|ZP_16004643.1| cytosine-specific methyltransferase [Neisseria meningitidis 92045]
gi|421560997|ref|ZP_16006850.1| modification methylase HpaII [Neisseria meningitidis NM2657]
gi|421567265|ref|ZP_16013001.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3001]
gi|433468975|ref|ZP_20426404.1| modification methylase HpaII [Neisseria meningitidis 98080]
gi|433477309|ref|ZP_20434632.1| modification methylase HpaII [Neisseria meningitidis 70012]
gi|433513179|ref|ZP_20469973.1| modification methylase HpaII [Neisseria meningitidis 63049]
gi|433515257|ref|ZP_20472029.1| modification methylase HpaII [Neisseria meningitidis 2004090]
gi|433517326|ref|ZP_20474075.1| modification methylase HpaII [Neisseria meningitidis 96023]
gi|433521648|ref|ZP_20478343.1| modification methylase HpaII [Neisseria meningitidis 61103]
gi|433523812|ref|ZP_20480477.1| modification methylase HpaII [Neisseria meningitidis 97020]
gi|433525616|ref|ZP_20482250.1| modification methylase HpaII [Neisseria meningitidis 69096]
gi|433530109|ref|ZP_20486702.1| modification methylase HpaII [Neisseria meningitidis NM3642]
gi|433534209|ref|ZP_20490754.1| modification methylase HpaII [Neisseria meningitidis 2001212]
gi|254670653|emb|CBA06706.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis
alpha153]
gi|254672637|emb|CBA06420.1| C-5 cytosine-specific DNA methylase [Neisseria meningitidis
alpha275]
gi|261392815|emb|CAX50396.1| putative type II restriction-modification system enzyme Mod
[Neisseria meningitidis 8013]
gi|304338130|gb|EFM04266.1| DNA (cytosine-5-)-methyltransferase [Neisseria meningitidis ATCC
13091]
gi|319410190|emb|CBY90526.1| putative type II restriction-modification system enzyme Mod
[Neisseria meningitidis WUE 2594]
gi|325134031|gb|EGC56686.1| DNA-cytosine methyltransferase [Neisseria meningitidis M13399]
gi|325203903|gb|ADY99356.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240355]
gi|372201826|gb|EHP15705.1| DNA-cytosine methyltransferase [Neisseria meningitidis NM220]
gi|372202684|gb|EHP16463.1| DNA-cytosine methyltransferase [Neisseria meningitidis NM233]
gi|402317885|gb|EJU53412.1| cytosine-specific methyltransferase [Neisseria meningitidis 93003]
gi|402324038|gb|EJU59476.1| cytosine-specific methyltransferase [Neisseria meningitidis NM183]
gi|402324305|gb|EJU59741.1| cytosine-specific methyltransferase [Neisseria meningitidis NM140]
gi|402326233|gb|EJU61638.1| cytosine-specific methyltransferase [Neisseria meningitidis NM2781]
gi|402330589|gb|EJU65936.1| cytosine-specific methyltransferase [Neisseria meningitidis 69166]
gi|402331229|gb|EJU66570.1| cytosine-specific methyltransferase [Neisseria meningitidis NM576]
gi|402335727|gb|EJU70991.1| cytosine-specific methyltransferase [Neisseria meningitidis 80179]
gi|402337508|gb|EJU72756.1| cytosine-specific methyltransferase [Neisseria meningitidis 92045]
gi|402339477|gb|EJU74693.1| modification methylase HpaII [Neisseria meningitidis NM2657]
gi|402344276|gb|EJU79417.1| cytosine-specific methyltransferase [Neisseria meningitidis NM3001]
gi|432205368|gb|ELK61398.1| modification methylase HpaII [Neisseria meningitidis 98080]
gi|432216531|gb|ELK72412.1| modification methylase HpaII [Neisseria meningitidis 70012]
gi|432248856|gb|ELL04280.1| modification methylase HpaII [Neisseria meningitidis 63049]
gi|432253845|gb|ELL09181.1| modification methylase HpaII [Neisseria meningitidis 2004090]
gi|432254335|gb|ELL09670.1| modification methylase HpaII [Neisseria meningitidis 96023]
gi|432260421|gb|ELL15680.1| modification methylase HpaII [Neisseria meningitidis 61103]
gi|432260711|gb|ELL15969.1| modification methylase HpaII [Neisseria meningitidis 97020]
gi|432261807|gb|ELL17052.1| modification methylase HpaII [Neisseria meningitidis 69096]
gi|432268037|gb|ELL23209.1| modification methylase HpaII [Neisseria meningitidis NM3642]
gi|432272719|gb|ELL27826.1| modification methylase HpaII [Neisseria meningitidis 2001212]
Length = 411
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 27/130 (20%)
Query: 442 PDG-INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV-------NRNIVRSWWEQTNQ 493
PD I + ++FSGIG E A HRL + V + DI N + +W
Sbjct: 34 PDSHIRLATVFSGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHN--- 90
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFY 553
D+ Q DA + + D+++GGSPC A S R GLE +LFY
Sbjct: 91 --------DITQFDARKFRNQV------DILVGGSPCQ--AFSMVGKRAGLEDTRGTLFY 134
Query: 554 DYFRILDLVK 563
++ R++D V+
Sbjct: 135 EFARVVDEVQ 144
>gi|121634611|ref|YP_974856.1| modification methylase [Neisseria meningitidis FAM18]
gi|385339792|ref|YP_005893664.1| DNA-cytosine methyltransferase [Neisseria meningitidis G2136]
gi|385342175|ref|YP_005896046.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149]
gi|385856978|ref|YP_005903490.1| DNA-cytosine methyltransferase [Neisseria meningitidis NZ-05/33]
gi|416178582|ref|ZP_11610633.1| DNA-cytosine methyltransferase [Neisseria meningitidis M6190]
gi|416188171|ref|ZP_11614640.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579]
gi|416192613|ref|ZP_11616719.1| DNA-cytosine methyltransferase [Neisseria meningitidis ES14902]
gi|416205493|ref|ZP_11620574.1| DNA-cytosine methyltransferase [Neisseria meningitidis 961-5945]
gi|433466968|ref|ZP_20424425.1| modification methylase HpaII [Neisseria meningitidis 87255]
gi|433492321|ref|ZP_20449415.1| modification methylase HpaII [Neisseria meningitidis NM586]
gi|433496582|ref|ZP_20453623.1| modification methylase HpaII [Neisseria meningitidis M7089]
gi|433500610|ref|ZP_20457596.1| modification methylase HpaII [Neisseria meningitidis NM174]
gi|433502798|ref|ZP_20459763.1| modification methylase HpaII [Neisseria meningitidis NM126]
gi|433532366|ref|ZP_20488932.1| modification methylase HpaII [Neisseria meningitidis 2007056]
gi|4887086|gb|AAD32180.1|AF125564_2 putative site specific DNA methyltransferase [Neisseria
meningitidis NMB]
gi|120866317|emb|CAM10058.1| putative modification methylase [Neisseria meningitidis FAM18]
gi|325132026|gb|EGC54724.1| DNA-cytosine methyltransferase [Neisseria meningitidis M6190]
gi|325135954|gb|EGC58564.1| DNA-cytosine methyltransferase [Neisseria meningitidis M0579]
gi|325137780|gb|EGC60355.1| DNA-cytosine methyltransferase [Neisseria meningitidis ES14902]
gi|325142075|gb|EGC64502.1| DNA-cytosine methyltransferase [Neisseria meningitidis 961-5945]
gi|325198036|gb|ADY93492.1| DNA-cytosine methyltransferase [Neisseria meningitidis G2136]
gi|325202381|gb|ADY97835.1| DNA-cytosine methyltransferase [Neisseria meningitidis M01-240149]
gi|325207867|gb|ADZ03319.1| DNA-cytosine methyltransferase [Neisseria meningitidis NZ-05/33]
gi|432203544|gb|ELK59595.1| modification methylase HpaII [Neisseria meningitidis 87255]
gi|432229110|gb|ELK84803.1| modification methylase HpaII [Neisseria meningitidis NM586]
gi|432235282|gb|ELK90898.1| modification methylase HpaII [Neisseria meningitidis M7089]
gi|432235901|gb|ELK91510.1| modification methylase HpaII [Neisseria meningitidis NM174]
gi|432240894|gb|ELK96425.1| modification methylase HpaII [Neisseria meningitidis NM126]
gi|432268311|gb|ELL23482.1| modification methylase HpaII [Neisseria meningitidis 2007056]
Length = 411
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 27/130 (20%)
Query: 442 PDG-INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV-------NRNIVRSWWEQTNQ 493
PD I + ++FSGIG E A HRL + V + DI N + +W
Sbjct: 34 PDSHIRLATVFSGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHN--- 90
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFY 553
D+ Q DA + + D+++GGSPC A S R GLE +LFY
Sbjct: 91 --------DITQFDARKFRNQV------DILVGGSPCQ--AFSMVGKRAGLEDTRGTLFY 134
Query: 554 DYFRILDLVK 563
++ R++D V+
Sbjct: 135 EFSRVVDEVQ 144
>gi|443723777|gb|ELU12047.1| hypothetical protein CAPTEDRAFT_1762 [Capitella teleta]
Length = 300
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 20/134 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VLSLF GIG ++ L LG ++ + SEVN + +R + + DV
Sbjct: 11 LRVLSLFDGIGTGKLVLDLLGFEVEAYFA---SEVNPDCLRL---TEVRHPAIKQLGDVT 64
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS---------LFYDY 555
L A ++ ++ DLVIGGSPC + + N R GL G+ S LF+D+
Sbjct: 65 MLTAEKLVEI----APIDLVIGGSPCQDFSIVN-PLRKGLMGRVSVVIPWLYHGLLFFDF 119
Query: 556 FRILDLVKNMMQRN 569
+RIL+ ++++ Q N
Sbjct: 120 YRILNELQSLQQAN 133
>gi|433471081|ref|ZP_20428472.1| modification methylase HpaII [Neisseria meningitidis 68094]
gi|433475430|ref|ZP_20432771.1| modification methylase HpaII [Neisseria meningitidis 88050]
gi|433527935|ref|ZP_20484546.1| modification methylase HpaII [Neisseria meningitidis NM3652]
gi|433538701|ref|ZP_20495181.1| modification methylase HpaII [Neisseria meningitidis 70030]
gi|432209570|gb|ELK65537.1| modification methylase HpaII [Neisseria meningitidis 68094]
gi|432211248|gb|ELK67203.1| modification methylase HpaII [Neisseria meningitidis 88050]
gi|432266242|gb|ELL21430.1| modification methylase HpaII [Neisseria meningitidis NM3652]
gi|432274709|gb|ELL29796.1| modification methylase HpaII [Neisseria meningitidis 70030]
Length = 406
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 27/130 (20%)
Query: 442 PDG-INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV-------NRNIVRSWWEQTNQ 493
PD I + ++FSGIG E A HRL + V + DI N + +W
Sbjct: 29 PDSHIRLATVFSGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHN--- 85
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFY 553
D+ Q DA + + D+++GGSPC A S R GLE +LFY
Sbjct: 86 --------DITQFDARKFRNQV------DILVGGSPCQ--AFSMVGKRAGLEDTRGTLFY 129
Query: 554 DYFRILDLVK 563
++ R++D V+
Sbjct: 130 EFARVVDEVQ 139
>gi|433494398|ref|ZP_20451468.1| modification methylase HpaII [Neisseria meningitidis NM762]
gi|433498642|ref|ZP_20455651.1| modification methylase HpaII [Neisseria meningitidis M7124]
gi|432231072|gb|ELK86742.1| modification methylase HpaII [Neisseria meningitidis NM762]
gi|432234476|gb|ELK90096.1| modification methylase HpaII [Neisseria meningitidis M7124]
Length = 406
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 27/130 (20%)
Query: 442 PDG-INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV-------NRNIVRSWWEQTNQ 493
PD I + ++FSGIG E A HRL + V + DI N + +W
Sbjct: 29 PDSHIRLATVFSGIGAVEQAFHRLNLNHTIVFAGDIDPYVKKSYLGNYKLNEDFWHN--- 85
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFY 553
D+ Q DA + + D+++GGSPC A S R GLE +LFY
Sbjct: 86 --------DITQFDARKFRNQV------DILVGGSPCQ--AFSMVGKRAGLEDTRGTLFY 129
Query: 554 DYFRILDLVK 563
++ R++D V+
Sbjct: 130 EFSRVVDEVQ 139
>gi|421863068|ref|ZP_16294769.1| putative DNA cytosine methyltransferase [Neisseria lactamica
Y92-1009]
gi|309379397|emb|CBX21964.1| putative DNA cytosine methyltransferase [Neisseria lactamica
Y92-1009]
Length = 195
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 19/126 (15%)
Query: 442 PDG-INVLSLFSGIGGAEVALHRLGVRMKNVVSVDI-SEVNRNIVRSWWEQTNQKGTLID 499
PD I + ++FSGIG E A +RL + V + DI S V ++ + ++ + N+ D
Sbjct: 34 PDSHIRLATVFSGIGAVEQAFYRLNLNHTIVFAGDIDSHVKKSYLGNY--KLNE-----D 86
Query: 500 F--ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
F D+ Q DA + + D+++GGSPC A S R GLE +LFY++ R
Sbjct: 87 FWHNDITQFDARKFRNQV------DILVGGSPCQ--AFSMVGKRAGLEDTRGTLFYEFAR 138
Query: 558 ILDLVK 563
++D V+
Sbjct: 139 VVDEVQ 144
>gi|331270911|ref|YP_004385622.1| putative cytosine-specific DNA methylotransferase [Clostridium
botulinum BKT015925]
gi|329127303|gb|AEB77247.1| putative cytosine-specific DNA methylotransferase [Clostridium
botulinum BKT015925]
Length = 318
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 20/118 (16%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
L LF+G G + L G + SEV++ ++++ K I++ D+ +++
Sbjct: 7 LELFAGSGLGGMVLDNYGGE-----CIGYSEVDKYAIKNYESNFPNK---INYGDITKIN 58
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLA-----GSNRHSRDGLEGKESSLFYDYFRILD 560
+ + FDL+IGGSPC N++ + +GL G ES LFYDY RIL+
Sbjct: 59 EKELPK-------FDLLIGGSPCQNISIMRKTNTKNGKVEGLRGNESKLFYDYIRILN 109
>gi|225158172|ref|ZP_03725067.1| DNA methyltransferase [Diplosphaera colitermitum TAV2]
gi|224802676|gb|EEG20930.1| DNA methyltransferase [Diplosphaera colitermitum TAV2]
Length = 414
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 17/111 (15%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF+GIGG ++ R G M + ++I E R+++R + T FAD++++D
Sbjct: 19 SLFAGIGGFDLGFKRAG--MNDCWQIEIDENCRDLLRRRFP------TCEKFADIREVDV 70
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ + + D++ GG PC +L+ + + R GL G S LFY+ RI+
Sbjct: 71 STLAPV-------DVICGGFPCQDLSVAGK--RAGLSGARSGLFYELVRIV 112
>gi|47229157|emb|CAG03909.1| unnamed protein product [Tetraodon nigroviridis]
Length = 628
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 30/139 (21%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG R++ ++ +I E + + +G + DV+
Sbjct: 314 IRVLSLFDGIATGYLVLRDLGFRIERYIASEICEDSIAV-----GMVKHEGKIEYVNDVR 368
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS-------------- 550
+ + + +G FDL+IGGSPCN+L+ N R GL G +S+
Sbjct: 369 TVTKKHLAE----WGPFDLLIGGSPCNDLSMVN-PLRKGLFGTKSTFPACFGSFHCCLCP 423
Query: 551 ------LFYDYFRILDLVK 563
LF++++RIL +++
Sbjct: 424 AEGTGRLFFEFYRILTMLR 442
>gi|171911440|ref|ZP_02926910.1| DNA-cytosine methyltransferase [Verrucomicrobium spinosum DSM 4136]
Length = 292
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 63/118 (53%), Gaps = 18/118 (15%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF+GIGG E+ R G + SV+I+ +NR ++ + + Q F DV++ A
Sbjct: 17 SLFAGIGGFELGFERAGFQCS--WSVEINPINRAVLADRFPHSRQ------FEDVRECGA 68
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAG---SNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + + D++ G PC +++ S++ R GL+G+ S L+ + RI+D ++
Sbjct: 69 HNLSPV-------DVLTAGFPCQDISAAGTSSKQGRPGLKGERSGLYREALRIIDAIR 119
>gi|379006890|ref|YP_005256341.1| DNA-cytosine methyltransferase [Sulfobacillus acidophilus DSM
10332]
gi|361053152|gb|AEW04669.1| DNA-cytosine methyltransferase [Sulfobacillus acidophilus DSM
10332]
Length = 406
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 17/119 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V S+FSG G ++A + G + + +D + ++++ W +T + +ADV
Sbjct: 3 LRVGSVFSGSGAMDLAFEQAGAEIAWQIELDAAA--QSVLARHWPETPR------YADVT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
Q+D ++ + D++IGG PC +L+ S R R GL G S LFY++ R+L+ ++
Sbjct: 55 QVDPADLDVV-------DVLIGGFPCQDLSISGR--RRGLAGARSGLFYEWIRLLESLR 104
>gi|222616490|gb|EEE52622.1| hypothetical protein OsJ_34959 [Oryza sativa Japonica Group]
Length = 157
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 76/148 (51%), Gaps = 27/148 (18%)
Query: 33 ALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAKAIQENGEEN----------------- 75
+L + + S+ S L+ +F+GMGFS +MV +AI+E G +N
Sbjct: 8 GILMDANGKANGSAPSALVAYFLGMGFSREMVFRAIKEIGNDNNNTFPHLLQLLPFLSGD 67
Query: 76 TDS--ILETLLTYSALGQSSQAEQHINSDQNSPE-LD-GSFLDGFSDTDSFEGEEITNPD 131
TDS ILE LLTY L + + E + ++ + D ++ DG D D +E++
Sbjct: 68 TDSEQILELLLTYQILEEEDEEEDVNWDEDDTVDNFDRATYSDGSGDEDFL--QEMS--- 122
Query: 132 PDKEEKLVSLASMGYSVQEASIAMERCG 159
+K+EK+ SL SMG+ EA A+ RCG
Sbjct: 123 -EKDEKIKSLVSMGFPEDEAMRAITRCG 149
>gi|398870617|ref|ZP_10625939.1| DNA-methyltransferase Dcm [Pseudomonas sp. GM74]
gi|398207854|gb|EJM94597.1| DNA-methyltransferase Dcm [Pseudomonas sp. GM74]
Length = 622
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID-FADV 503
I LSLFSG GG +V H G + V ++ N E +KG + ++
Sbjct: 4 IKTLSLFSGAGGLDVGFHMAGFDIVACVELETKYCNS------LEANKKKGNFLSPSTNI 57
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRD--GLEGKESSLFYDYFRILDL 561
+D + + G + +IGG PC + + R S G++ L+ +Y ILD+
Sbjct: 58 HNIDIRNFDPHLYKDAGIECIIGGPPCQTFSAAGRRSGGVIGIQDLRGQLYEEYCNILDV 117
Query: 562 VK 563
+K
Sbjct: 118 IK 119
>gi|339628971|ref|YP_004720614.1| DNA-cytosine methyltransferase [Sulfobacillus acidophilus TPY]
gi|339286760|gb|AEJ40871.1| DNA-cytosine methyltransferase [Sulfobacillus acidophilus TPY]
Length = 408
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 17/119 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V S+FSG G ++A + G + + +D + ++++ W +T + +ADV
Sbjct: 5 LRVGSVFSGSGAMDLAFEQAGAEIAWQIELDAAA--QSVLARHWPETPR------YADVT 56
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
Q+D ++ + D++IGG PC +L+ S R R GL G S LFY++ R+L+ ++
Sbjct: 57 QVDPADLDVV-------DVLIGGFPCQDLSISGR--RRGLAGARSGLFYEWIRLLESLR 106
>gi|418630145|ref|ZP_13192633.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
VCU127]
gi|374831827|gb|EHR95553.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
VCU127]
Length = 329
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 61/118 (51%), Gaps = 8/118 (6%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
N + LFSG GG + G KNV SV E +R +++ + N ++ D+Q+
Sbjct: 4 NYIDLFSGAGGMSLGFDLEG--FKNVFSV---EYDRQTAQTY--RYNFPNHVLINKDIQE 56
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ N I+++IN D++IGG PC + + + R ++ + LF +Y R + ++K
Sbjct: 57 ISTNEIKKIINN-NTVDVIIGGPPCQGFSLAGKFGRTFIDDPRNQLFKEYLRFVSILK 113
>gi|331027909|ref|YP_004421459.1| dcm gene product [Synechococcus phage S-CBS2]
gi|294805522|gb|ADF42361.1| DNA methylase [Synechococcus phage S-CBS2]
Length = 286
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+NVLSLF G+ ++AL++LG++ N + +I + + + + T Q G++ D
Sbjct: 1 MNVLSLFDGMSCGQIALNKLGIKYDNYFASEIDKYAIQVTQKNYPNTKQIGSITDVKG-- 58
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
DL+ GGSPC + SN + G +G +S LF+++ R+L K
Sbjct: 59 -----------EYLPKIDLLFGGSPCQSF--SNAGNNKGFDG-QSGLFWEFVRLLKETK 103
>gi|385328297|ref|YP_005882600.1| Cytosine-specific methyltransferase NlaX [Neisseria meningitidis
alpha710]
gi|308389149|gb|ADO31469.1| Cytosine-specific methyltransferase NlaX [Neisseria meningitidis
alpha710]
Length = 275
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
V SLF+GIGG ++ + G + V+I EVNR ++ + Q FADV+
Sbjct: 5 TVGSLFAGIGGFDLGFEQAG--FQTAWQVEIDEVNRAVLADRFPHARQ------FADVRT 56
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ D+++GG PC +++ + + R GL G+ + LFYD I+D +K
Sbjct: 57 --------ALPDLWSVDVIVGGFPCQDVSTAGK--RRGLAGERTGLFYDAMHIVDTLK 104
>gi|227357019|ref|ZP_03841390.1| DNA-cytosine methyltransferase [Proteus mirabilis ATCC 29906]
gi|261345118|ref|ZP_05972762.1| DNA (cytosine-5-)-methyltransferase [Providencia rustigianii DSM
4541]
gi|227162822|gb|EEI47782.1| DNA-cytosine methyltransferase [Proteus mirabilis ATCC 29906]
gi|282566805|gb|EFB72340.1| DNA (cytosine-5-)-methyltransferase [Providencia rustigianii DSM
4541]
Length = 301
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 15/114 (13%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V S F+GIGG ++ L R G M V +I++ ++++ W + + D+ L
Sbjct: 11 VSSFFAGIGGFDLGLERSG--MNVVFQCEINKFCQSVLNKNWPD------IPLYTDITNL 62
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
AN I ++ GG PC +++ +N+ R GLEG S LFY Y ++++
Sbjct: 63 KANDIPDS-------NVWCGGFPCQDVSSANQGKRKGLEGARSGLFYTYAKLIE 109
>gi|429219719|ref|YP_007181363.1| site-specific DNA methylase [Deinococcus peraridilitoris DSM 19664]
gi|429130582|gb|AFZ67597.1| site-specific DNA methylase [Deinococcus peraridilitoris DSM 19664]
Length = 239
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V SLF+GIGG E L G K + V+I R ++ W T + F DV+
Sbjct: 3 LTVGSLFAGIGGLESGLELTG-GFKTIWQVEIDPFARAVLEKHWPDTPR------FTDVR 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHS-RDGLEGKESSLFYDYFRIL 559
+ A + + D++ GG PC +++ +N S R GL G++S L+ +Y RI+
Sbjct: 56 DITATLVSRP-------DVICGGFPCQDISSANTASDRLGLAGEKSGLWSEYARIV 104
>gi|328698549|ref|XP_003240668.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like
[Acyrthosiphon pisum]
Length = 346
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 64/118 (54%), Gaps = 16/118 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD-V 503
+ VLSLF GIG AL +LG ++ + + SE++++ + T F+D +
Sbjct: 60 LRVLSLFDGIGTGYYALLKLGFDIEVIYA---SEIDKDALMV---------TKYHFSDNI 107
Query: 504 QQLDA--NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS-LFYDYFRI 558
+QL + +M++ +L+ GGSPC++L+G N + + K + LFYDY+RI
Sbjct: 108 KQLGSVTEITTKMLDQIAPINLLFGGSPCSDLSGVNYRKKGLFDPKGTGILFYDYYRI 165
>gi|424780746|ref|ZP_18207616.1| Modification methylase [Catellicoccus marimammalium M35/04/3]
gi|422842671|gb|EKU27120.1| Modification methylase [Catellicoccus marimammalium M35/04/3]
Length = 416
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 30/156 (19%)
Query: 432 YHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNI-------- 483
YH++ + INV ++FSGIG E AL R+ + K + + D E NI
Sbjct: 39 YHINFERNRNIIMINVATVFSGIGAIECALKRMNIPHKIIFACDNGERELNISYEEISRQ 98
Query: 484 -------------VRSWWEQTNQKGTLID-FADVQQLDANRIEQMINAFGG------FDL 523
+ ++QT ++ + + + +D N+ Q I G DL
Sbjct: 99 LQNRNNEYDIQTFINKIYDQTGKRNYVQESYQANYNIDPNKFFQDIRFVDGTNYRNKIDL 158
Query: 524 VIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+GGSPC + + S + R GL+ +LFYD+ R++
Sbjct: 159 FVGGSPCQSFSISGK--RAGLDDARGTLFYDFARLV 192
>gi|313668701|ref|YP_004048985.1| modification methylase [Neisseria lactamica 020-06]
gi|313006163|emb|CBN87625.1| putative modification methylase [Neisseria lactamica 020-06]
Length = 372
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 63/118 (53%), Gaps = 18/118 (15%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDI-SEVNRNIVRSWWEQTNQKGTLIDF--ADVQQ 505
++FSGIG E A +RL + V + DI S V ++ + ++ + N+ DF D+ Q
Sbjct: 3 TVFSGIGAVEQAFYRLNLNHTIVFAGDIDSHVKKSYLGNY--KLNE-----DFWHNDITQ 55
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
DA + + D+++GGSPC A S R GLE +LFY++ R++D V+
Sbjct: 56 FDARKFRNQV------DILVGGSPCQ--AFSMVGKRAGLEDTRGTLFYEFARVVDEVQ 105
>gi|281420730|ref|ZP_06251729.1| DNA (cytosine-5-)-methyltransferase [Prevotella copri DSM 18205]
gi|281405022|gb|EFB35702.1| DNA (cytosine-5-)-methyltransferase [Prevotella copri DSM 18205]
Length = 432
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 55/122 (45%), Gaps = 26/122 (21%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE-------VNRNIVRSWWEQTNQKGTL 497
+ + +LFSGIG E A RLG+ K V + DI N I W
Sbjct: 57 VRIGTLFSGIGAIEHAFQRLGLNHKIVFAGDIEPKCKISYFANYKINEEDW--------- 107
Query: 498 IDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
F D+++ DA + + G D ++GG+PC A S R G E +LFY++ R
Sbjct: 108 --FTDIREFDATKYK------GKVDFIVGGAPCQ--AFSMVGHRLGFEDARGTLFYEFAR 157
Query: 558 IL 559
++
Sbjct: 158 VV 159
>gi|428205526|ref|YP_007089879.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC
7203]
gi|428007447|gb|AFY86010.1| DNA-cytosine methyltransferase [Chroococcidiopsis thermalis PCC
7203]
Length = 356
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 20/117 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+NV+SLFSG GG ++ H+ G N++ + E +R+I ++ + N + T +D D++
Sbjct: 1 MNVVSLFSGCGGLDLGFHQAGF---NIIWAN--EYDRSIWNTY--EINHQNTKLDKRDIR 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
+ ++ I I +IGG PC + AG+ R G+ +FY+Y RIL
Sbjct: 54 SIQSDEIPDCIG-------IIGGPPCQSWSEAGAGR----GINDSRGQVFYEYIRIL 99
>gi|47222420|emb|CAG12940.1| unnamed protein product [Tetraodon nigroviridis]
Length = 775
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 58/107 (54%), Gaps = 14/107 (13%)
Query: 455 GGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIE 512
G + L LG+++ V+ ++ E + +VR +G ++ DV+ + IE
Sbjct: 507 GVCLLVLKDLGIQVDKYVASEVCEDSITVGMVR-------HQGRIMYVGDVRNVTRKHIE 559
Query: 513 QMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 560 E----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 601
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 42/210 (20%)
Query: 237 IVHRSLPEAAAGPPYFY-YENVALAPKGVWDT--ISRFLYDVEPEFVDSKYFCAAARKRG 293
++H + P+ P+F+ +ENV GV D ISRFL + P +D+K AA R R
Sbjct: 600 LLHEARPKVGDERPFFWLFENVVAM--GVSDKRDISRFL-ESNPVMIDAKEVSAAHRARY 656
Query: 294 YVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLT--ERIR 351
+ NLP +R PL P T L+ LQ C+ ++ E++R
Sbjct: 657 FWGNLPGMSR----PLTPM-----------------TNDKLD-LQECLEHGRVAKFEKLR 694
Query: 352 KALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGG 411
+ + MD K +++W E+E + GFP ++T
Sbjct: 695 TITTRSNSVKQGKDEHFPVFMDN--KEDILWC----------TEMERVFGFPVHYTDVSN 742
Query: 412 ISRTDRYKSLGNSFQVDTVAYHLSVLKEMY 441
+SR R + LG S+ V + + + LKE +
Sbjct: 743 MSRLARQRLLGRSWSVPVIRHLFAPLKEYF 772
>gi|168018932|ref|XP_001761999.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686716|gb|EDQ73103.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 970
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
VLSLF G+GG AL +LG+ S ++ +V+S + G D+++L
Sbjct: 356 VLSLFDGLGGIWQALTKLGIPFSGYSS-EVLAPAIQVVKSRHPRVKHVG------DIRKL 408
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + + + + DLV+GG PC +L+ + ++GL G S LF+D R+L + K
Sbjct: 409 NLSAVPEKV------DLVVGGFPCQDLSIMGK--KEGLHGSRSKLFFDLLRVLKVFK 457
>gi|67514587|ref|NP_001019999.1| DNA (cytosine-5)-methyltransferase 3B [Gallus gallus]
gi|66766326|dbj|BAD99024.1| DNA methyltransferase 3B [Gallus gallus]
Length = 851
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 13/92 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG++++ ++ +I E + VR +G + D
Sbjct: 569 IRVLSLFDGIATGYLVLKDLGIQVEKYIASEICEDPLAVGTVR-------HEGNITYVHD 621
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLA 534
V+ + IE+ +G FDLVIGGSPCN+L+
Sbjct: 622 VRNITKRNIEE----WGPFDLVIGGSPCNDLS 649
>gi|238923038|ref|YP_002936551.1| DcmB [Eubacterium rectale ATCC 33656]
gi|238874710|gb|ACR74417.1| DcmB [Eubacterium rectale ATCC 33656]
Length = 672
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 11/115 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++SLFSG GG ++ G + +E ++ I ++ + N T + D++
Sbjct: 1 MNIISLFSGCGGLDLGFESAGFNIPVA-----NEFDKTIWATF--KANHPNTHLIEGDIR 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
Q+ IEQ I+ G D +IGG PC + S S G++ LF+DY RIL
Sbjct: 54 QVTKEDIEQYID--GEIDGIIGGPPCQ--SWSEAGSLKGIKDARGQLFFDYIRIL 104
>gi|167997277|ref|XP_001751345.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162697326|gb|EDQ83662.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 812
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
VLSLF G+GG AL LG+ S ++ +V+S G DV++L
Sbjct: 148 VLSLFDGLGGIWQALTNLGIPFSGYSS-EVLAPAIQVVKSRHPHVKHVG------DVRKL 200
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + I + + DLV+GG PC +L+ + ++GL G S LF+D R+L + K
Sbjct: 201 NLSAIPEKV------DLVVGGFPCQDLSIMGK--KEGLHGSRSKLFFDLLRVLQIFK 249
>gi|416402327|ref|ZP_11687359.1| DNA-cytosine methyltransferase [Crocosphaera watsonii WH 0003]
gi|357261917|gb|EHJ11130.1| DNA-cytosine methyltransferase [Crocosphaera watsonii WH 0003]
Length = 422
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 15/148 (10%)
Query: 416 DRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVD 475
D KS+ N+ + VL+ I + LF+G GG + L GVR + +V
Sbjct: 43 DLLKSVHNNLNGNNSGREFKVLQSTEKTEIKTIELFAGCGGMALGLENAGVRHELLV--- 99
Query: 476 ISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAG 535
EV+++ V + Q N++ I DV +D + +G D+V GG PC +
Sbjct: 100 --EVSKDCVNTL--QKNRQNWTIFQEDVSNIDFQQY------YGKIDIVSGGFPCQAFSY 149
Query: 536 SNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + G E +LF+++ R L VK
Sbjct: 150 AGKCK--GFEDTRGTLFFEFARCLAEVK 175
>gi|67924199|ref|ZP_00517640.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67853953|gb|EAM49271.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 358
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 15/148 (10%)
Query: 416 DRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVD 475
D KS+ N+ + VL+ I + LF+G GG + L GVR + +V
Sbjct: 43 DLLKSVHNNLNGNNSGREFKVLQSTEKTEIKTIELFAGCGGMALGLENAGVRHELLV--- 99
Query: 476 ISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAG 535
EV+++ V + Q N++ I DV +D + +G D+V GG PC +
Sbjct: 100 --EVSKDCVNTL--QKNRQNWTIFQEDVSNIDFQQY------YGKIDIVSGGFPCQAFSY 149
Query: 536 SNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + G E +LF+++ R L VK
Sbjct: 150 AGKCK--GFEDTRGTLFFEFARCLAEVK 175
>gi|288576182|ref|ZP_05978340.2| DNA (cytosine-5-)-methyltransferase [Neisseria mucosa ATCC 25996]
gi|288566126|gb|EFC87686.1| DNA (cytosine-5-)-methyltransferase [Neisseria mucosa ATCC 25996]
Length = 406
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 64/120 (53%), Gaps = 14/120 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDIS-EVNRNIVRSWWEQTNQKGTLIDFADV 503
I + ++FSGIG E A +RL + V + DI V ++ + ++ Q ++ G D D+
Sbjct: 33 IRLATVFSGIGAVEQAFYRLNLNHTIVFAGDIDPHVKKSYLGNY--QLDE-GFWHD--DI 87
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
Q DA + + D+++GGSPC A S R GLE +LFY++ R++D V+
Sbjct: 88 TQFDARKFRNQV------DILVGGSPCQ--AFSMVGKRAGLEDTRGTLFYEFARVVDEVQ 139
>gi|307103760|gb|EFN52018.1| hypothetical protein CHLNCDRAFT_139582 [Chlorella variabilis]
Length = 632
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 12/131 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQK---GTLIDFA 501
I ++ LF+G+ A R G+R+ +V++S R + + + L D A
Sbjct: 168 IGLVDLFAGLSTAVCGALRAGMRVDRYYAVEVSPSVRRMADHHLRRLQARHGPAALPDSA 227
Query: 502 DV-------QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYD 554
Q +R+ +M + G DL+ G PC +L+ SNR ++ GL G S LF+
Sbjct: 228 LASAHSALPQDSGGSRLGRM--SLGRIDLLCSGFPCQDLSRSNRGAQLGLRGARSGLFFQ 285
Query: 555 YFRILDLVKNM 565
+IL+ VK +
Sbjct: 286 AAQILEWVKEV 296
>gi|334120434|ref|ZP_08494514.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
gi|333456412|gb|EGK85044.1| DNA-cytosine methyltransferase [Microcoleus vaginatus FGP-2]
Length = 330
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 64/118 (54%), Gaps = 20/118 (16%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
G+N++SLFSG GG + LG R+ V +E +++I ++ + N T++D D+
Sbjct: 4 GMNIISLFSGCGGLD-----LGFRLAGFNPVWANEYDKSIWDTY--EFNHPETILDRRDI 56
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
++++++ I I +IGG PC + AG+ R G++ LF++Y RI+
Sbjct: 57 RKINSDEIPNCIG-------IIGGPPCQSWSEAGAKR----GIDDSRGQLFWEYIRIV 103
>gi|269976186|ref|ZP_06183182.1| modification methylase Eco47II [Mobiluncus mulieris 28-1]
gi|269935515|gb|EEZ92053.1| modification methylase Eco47II [Mobiluncus mulieris 28-1]
Length = 424
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 428 DTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSW 487
D H VL + P+G + LF+G GG + L G R V +SE++++ V +
Sbjct: 60 DETRRHFRVLNDPKPNGFTSVDLFAGAGGTALGLENAGFR-----HVLLSELDKDAVATL 114
Query: 488 WEQTNQKGTLIDFADVQQLDANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDGLEG 546
+ N+ + DV LD AF G DLV GG PC + + HSR G E
Sbjct: 115 --RLNRPNWNVSAGDVASLD-------FRAFAGKVDLVEGGFPCQAFSYAG-HSR-GFED 163
Query: 547 KESSLFYDYFRIL 559
+LF+++ R +
Sbjct: 164 TRGTLFFEFARAV 176
>gi|227876656|ref|ZP_03994765.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC
35243]
gi|227842553|gb|EEJ52753.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus mulieris ATCC
35243]
Length = 424
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 428 DTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSW 487
D H VL + P+G + LF+G GG + L G R V +SE++++ V +
Sbjct: 60 DETRRHFRVLNDPKPNGFTSVDLFAGAGGTALGLENAGFR-----HVLLSELDKDAVATL 114
Query: 488 WEQTNQKGTLIDFADVQQLDANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDGLEG 546
+ N+ + DV LD AF G DLV GG PC + + HSR G E
Sbjct: 115 --RLNRPNWNVSAGDVASLD-------FRAFAGKVDLVEGGFPCQAFSYAG-HSR-GFED 163
Query: 547 KESSLFYDYFRIL 559
+LF+++ R +
Sbjct: 164 TRGTLFFEFARAV 176
>gi|306817606|ref|ZP_07451349.1| modification methylase Eco47II [Mobiluncus mulieris ATCC 35239]
gi|307699879|ref|ZP_07636930.1| DNA binding domain protein, excisionase family [Mobiluncus mulieris
FB024-16]
gi|304649648|gb|EFM46930.1| modification methylase Eco47II [Mobiluncus mulieris ATCC 35239]
gi|307614917|gb|EFN94135.1| DNA binding domain protein, excisionase family [Mobiluncus mulieris
FB024-16]
Length = 424
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 17/133 (12%)
Query: 428 DTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSW 487
D H VL + P+G + LF+G GG + L G R V +SE++++ V +
Sbjct: 60 DETRRHFRVLNDPKPNGFTSVDLFAGAGGTALGLENAGFR-----HVLLSELDKDAVATL 114
Query: 488 WEQTNQKGTLIDFADVQQLDANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDGLEG 546
+ N+ + DV LD AF G DLV GG PC + + HSR G E
Sbjct: 115 --RLNRPNWNVSAGDVASLD-------FRAFAGKVDLVEGGFPCQAFSYAG-HSR-GFED 163
Query: 547 KESSLFYDYFRIL 559
+LF+++ R +
Sbjct: 164 TRGTLFFEFARAV 176
>gi|383852052|ref|XP_003701544.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Megachile
rotundata]
Length = 753
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 18/136 (13%)
Query: 435 SVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDI---SEVNRNIVRSWWEQT 491
SV + I VLSLF G+ + L +LG+ +VD+ SE++ + + +
Sbjct: 459 SVQHSQHGRKIRVLSLFDGLSTGLLVLQKLGL------AVDVYYASEIDPDALLV--SAS 510
Query: 492 NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS- 550
+ ++ DV+ + +I+++ DL+IGGSPCN+L+ +N +R GL +
Sbjct: 511 HFGDRIVHLGDVRGITKEKIKEI----APIDLLIGGSPCNDLSLAN-PARLGLYDPNGTG 565
Query: 551 -LFYDYFRILDLVKNM 565
LF++Y RIL+L+K +
Sbjct: 566 ILFFEYRRILELLKKI 581
>gi|254412384|ref|ZP_05026158.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180694|gb|EDX75684.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 221
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 63/115 (54%), Gaps = 6/115 (5%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
++ LSLFSG GG ++ + + G + + ++I +RS ++ N + LI+ D++
Sbjct: 2 LSALSLFSGAGGMDIGVRQAGFEI--LADIEIDPYCCKTIRSAMDRENLRTLLIE-KDIK 58
Query: 505 QLD-ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
Q+D ++ I ++ G DL+ GGSPC + + + + R L + L +++ R+
Sbjct: 59 QVDPSHLIRELTIQPGDLDLLFGGSPCQSFSQAGK--RGSLNDERGLLLFEFVRL 111
>gi|47201036|emb|CAF88359.1| unnamed protein product [Tetraodon nigroviridis]
Length = 234
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 10/102 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG +++ ++ ++ E + + N +G + DV+
Sbjct: 142 IRVLSLFDGIATGYLVLKDLGFKVETYIASEVCEDSIAVA-----AVNHEGKITQVGDVR 196
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEG 546
++ ++ ++ +G FDL+IGGSPCN+L+ N R GL G
Sbjct: 197 FIN----QEHLHRWGPFDLLIGGSPCNDLSIVNP-IRKGLYG 233
>gi|153007575|ref|YP_001368790.1| DNA (cytosine-5-)-methyltransferase [Ochrobactrum anthropi ATCC
49188]
gi|151559463|gb|ABS12961.1| DNA (cytosine-5-)-methyltransferase [Ochrobactrum anthropi ATCC
49188]
Length = 283
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VL LFSGIGG + L R G + V +I E R ++ W + + DV+
Sbjct: 4 LRVLDLFSGIGGFSLGLERTG-GFETVAFCEIEEFPRRVLAKHWPEVPC------YHDVR 56
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+L A ++ A D++ GG PC +++ + + GLEG+ S L+ +Y R++ ++
Sbjct: 57 ELTAAKLASDGIA---IDVICGGFPCQDISTAGHGA--GLEGERSGLWSEYARLIGELR 110
>gi|225862882|ref|YP_002748260.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
gi|225789623|gb|ACO29840.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus 03BB102]
Length = 360
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 8/117 (6%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V+ LF G GG G R+ V ++N + V ++ N + AD++++
Sbjct: 5 VIDLFCGCGGISE-----GFRLSGFEIVGGLDINEDAVETF--NKNFPDSQAYCADIEKI 57
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ I M + G D+++GG PC + +NR ++ +E + LFY+Y R ++++K
Sbjct: 58 KNDDIPFMFDLLGDIDVIVGGPPCQGFSSANRWQKE-IEDPRNKLFYEYIRFVEVLK 113
>gi|240142445|ref|YP_002966955.1| putative site-specific DNA-methyltransferase [Methylobacterium
extorquens AM1]
gi|240012389|gb|ACS43614.1| putative site-specific DNA-methyltransferase [Methylobacterium
extorquens AM1]
Length = 335
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 25/126 (19%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VL LFSGIGG + L R G + + + E R I+R W DV+
Sbjct: 8 LTVLDLFSGIGGISLGLERAGP-FRTIAFCEALEARRRILRRHWPDVPI------HDDVR 60
Query: 505 QLDANRIEQMINAFGG-----FDLVIGGSPCNN--LAGSNRHSRDGLEGKESSLFYDYFR 557
LD +FG D++ GG PC + LAG R GLEG+ S L+ +Y R
Sbjct: 61 TLDG-------RSFGAGSSRSVDVICGGFPCQDISLAGKGR----GLEGERSGLWSEYAR 109
Query: 558 ILDLVK 563
++ ++
Sbjct: 110 LVGEIR 115
>gi|424782896|ref|ZP_18209741.1| DNA-cytosine methyltransferase [Campylobacter showae CSUNSWCD]
gi|421959342|gb|EKU10952.1| DNA-cytosine methyltransferase [Campylobacter showae CSUNSWCD]
Length = 377
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+ +LFSGIG E A + NV ++ E+++ +S+ Q N ++ + DV
Sbjct: 1 MNLATLFSGIGAPEFAAREV---FDNVKTIFACEIDKFARQSY--QANHDAPIVFYEDVC 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
LDA G D++IGGSPC + + + + R G +G+ +L + ++R++
Sbjct: 56 DLDARAYA------GQIDILIGGSPCQDFSIAGQ--RAGEDGERGNLIWQFYRVV 102
>gi|258406639|ref|YP_003199380.1| transcriptional regulator, XRE family [Desulfohalobium retbaense
DSM 5692]
gi|257798866|gb|ACV69802.1| transcriptional regulator, XRE family [Desulfohalobium retbaense
DSM 5692]
Length = 468
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 23/165 (13%)
Query: 403 PKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMY--PDG--INVLSLFSGIGGAE 458
PK R SRT+ +S N+ LS++++ + P G +N +SLFSG GG
Sbjct: 80 PKQSGRSSRASRTNGNESFINA---------LSIIEKKHANPKGEALNAISLFSGCGGFS 130
Query: 459 VALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAF 518
+ G ++ + +D R I R + + + G D+ Q+ +I+ +
Sbjct: 131 LGFSAAGFNVRGFLELDPGL--RKIYRLNFPNSFEMG-----GDITQIQDAKIKNYKSLI 183
Query: 519 GGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
G D++IGG PC + S + RD + ++LF Y R +D +
Sbjct: 184 GDIDVIIGGPPCQGFSLSGK--RD-VNDPRNTLFKHYLRFVDAFR 225
>gi|50914506|ref|YP_060478.1| Type II restriction-modification system methylation subunit
[Streptococcus pyogenes MGAS10394]
gi|40218542|gb|AAR83196.1| type II modification methylase [Streptococcus pyogenes]
gi|50261587|gb|AAT72355.1| methylase [Streptococcus pyogenes]
gi|50903580|gb|AAT87295.1| Type II restriction-modification system methylation subunit
[Streptococcus pyogenes MGAS10394]
gi|114386439|gb|ABI74454.1| DNA methyltransferase [Streptococcus pyogenes]
Length = 408
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 436 VLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKG 495
++ E P ++ LF+GIGG RLG ++ N V + S W++ QK
Sbjct: 94 IISENLP--FKMIDLFAGIGGT-----RLGFQLTNEVET--------VFTSEWDKFAQKT 138
Query: 496 TLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDY 555
+ +F D + D +I++ N D+++ G PC A S R G E +LF+D
Sbjct: 139 YITNFGDTPEGDITQIDE--NTIPDHDILVAGFPCQ--AFSQAGKRLGFEDTRGTLFFDV 194
Query: 556 FRIL 559
RI+
Sbjct: 195 ARII 198
>gi|251811836|ref|ZP_04826309.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282875124|ref|ZP_06283997.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
gi|417914581|ref|ZP_12558225.1| putative modification methylase HaeIII [Staphylococcus epidermidis
VCU109]
gi|421608173|ref|ZP_16049400.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis AU12-03]
gi|251804633|gb|EES57290.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295889|gb|EFA88410.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
SK135]
gi|341652137|gb|EGS75927.1| putative modification methylase HaeIII [Staphylococcus epidermidis
VCU109]
gi|406656171|gb|EKC82583.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis AU12-03]
Length = 329
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
N + LFSG GG + G KNV SV+ ++ + + N ++ D+Q+
Sbjct: 4 NYIDLFSGAGGMSLGFDLEG--FKNVFSVEY-----DLQTAQTYRYNFPNHVLINKDIQE 56
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ N I+++IN D++IGG PC + + + R ++ + LF +Y R + ++K
Sbjct: 57 ISTNEIKKIINN-NTVDVIIGGPPCQGFSLAGKFGRTFIDDPRNQLFKEYLRFVSILK 113
>gi|403070814|ref|ZP_10912146.1| prophage LambdaSa04, methyltransferase C-5 [Oceanobacillus sp.
Ndiop]
Length = 456
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ FSGIGG RLG+ M + + E ++ VRS+ + +G D+ +L
Sbjct: 10 IDFFSGIGG-----FRLGLEMAGMKCIGFCEKDKFAVRSYRAMYDTEGEWYG-EDITKLR 63
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
N I + D+ GSPC NL+ + R R GL G S LF+D+ +L
Sbjct: 64 TNEIPRA-------DIWTAGSPCQNLSIAGR--RSGLHGDRSGLFFDFVDLL 106
>gi|392959668|ref|ZP_10325150.1| DNA-cytosine methyltransferase [Pelosinus fermentans DSM 17108]
gi|421052466|ref|ZP_15515455.1| DNA-cytosine methyltransferase [Pelosinus fermentans B4]
gi|421057582|ref|ZP_15520385.1| DNA-cytosine methyltransferase [Pelosinus fermentans B3]
gi|421063431|ref|ZP_15525415.1| DNA-cytosine methyltransferase [Pelosinus fermentans A12]
gi|421070578|ref|ZP_15531710.1| DNA-cytosine methyltransferase [Pelosinus fermentans A11]
gi|392443197|gb|EIW20748.1| DNA-cytosine methyltransferase [Pelosinus fermentans B4]
gi|392448204|gb|EIW25407.1| DNA-cytosine methyltransferase [Pelosinus fermentans A11]
gi|392456221|gb|EIW32975.1| DNA-cytosine methyltransferase [Pelosinus fermentans DSM 17108]
gi|392462706|gb|EIW38751.1| DNA-cytosine methyltransferase [Pelosinus fermentans B3]
gi|392462937|gb|EIW38951.1| DNA-cytosine methyltransferase [Pelosinus fermentans A12]
Length = 399
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
GINVLSLF GI +VAL R G+++ + SE+++N ++ Q N T I D+
Sbjct: 3 GINVLSLFDGISCGQVALERAGIKVAKYYA---SEIDKNAIQV--TQKNYPNT-IQLGDI 56
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ I+ + +VIGGSPC + + + S LF+ Y IL+ +K
Sbjct: 57 TKWREWNID-----WSSIRIVIGGSPCQGFSFAGLQLN--FDDPRSKLFFVYAEILEHIK 109
Query: 564 NM 565
++
Sbjct: 110 SV 111
>gi|402494952|ref|ZP_10841687.1| DNA-cytosine methyltransferase, partial [Aquimarina agarilytica
ZC1]
Length = 234
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+L LFSG GG + L + G +K +I + ++ +N G ++
Sbjct: 4 FTLLDLFSGTGGFPLGLLKAGFTLKKHYFSEIDPFAIANYQYNFKNSNYAGP------IE 57
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ N IE+ D++ GSPC +L+ + R R GL+G +S LF++ RILDL K
Sbjct: 58 EIQKNTIEKP-------DIISFGSPCQDLSVAGR--RKGLKGSKSKLFFEAIRILDLYK 107
>gi|405958684|gb|EKC24789.1| DNA (cytosine-5)-methyltransferase 3A [Crassostrea gigas]
Length = 824
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 64/122 (52%), Gaps = 9/122 (7%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
+ LSLF GI +V L +G+ ++ + SE++ + + N + ++ DV
Sbjct: 547 AVRALSLFDGISTGKVVLDNIGLDVEEYYA---SEIDDDAILV--SMVNHRDSVQHLGDV 601
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ L +++++ G DL+IGGSPCN+L+ N R E L +++ R+L+ ++
Sbjct: 602 RSLTREKLDKL----GRIDLLIGGSPCNDLSIVNPARRGLSEEGTGHLVFEFGRVLEYLQ 657
Query: 564 NM 565
++
Sbjct: 658 SV 659
>gi|373121633|ref|ZP_09535500.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
21_3]
gi|371664612|gb|EHO29781.1| DNA (cytosine-5-)-methyltransferase [Erysipelotrichaceae bacterium
21_3]
Length = 663
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 17/118 (14%)
Query: 442 PDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
P + + SLF G GG LG + + V SE+ +R T + + +
Sbjct: 21 PQTLTLGSLFDGSGG-----FPLGGLLSGITPVWASEIEPFPIRV---TTKRLPFMKHYG 72
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
DV ++D +IE + D++ GSPC +++ + R R+GL+G SSLFY+ RI+
Sbjct: 73 DVSRMDGGKIEPV-------DIITFGSPCQDMSIAGR--REGLDGSRSSLFYEAVRIV 121
>gi|443648361|ref|ZP_21129981.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa DIANCHI905]
gi|159030022|emb|CAO90403.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443335207|gb|ELS49684.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa DIANCHI905]
Length = 412
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQT 491
L +L+ + P V+ LF+G GG + L G++ + +V ++ VN + R W
Sbjct: 57 ELRILQTVEPTNYTVIELFAGCGGMALGLENAGLKTQLLVEINQDCVNTLRLNRPQWNVI 116
Query: 492 NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKES 549
NQ I F+D + D+V GG PC + AG + GLE
Sbjct: 117 NQDIKKIKFSDFRD--------------KIDIVAGGFPCQPFSYAGLGK----GLEDLRG 158
Query: 550 SLFYDYFRILDLVK 563
SLF+++ R L V+
Sbjct: 159 SLFFEFARCLQEVQ 172
>gi|425454122|ref|ZP_18833869.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9807]
gi|389805294|emb|CCI15002.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9807]
Length = 412
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQT 491
L +L+ + P V+ LF+G GG + L G++ + +V ++ VN + R W
Sbjct: 57 ELRILQTVEPTNYTVIELFAGCGGMALGLENAGLKTQLLVEINQDCVNTLRLNRPQWNVI 116
Query: 492 NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKES 549
NQ I F+D + D+V GG PC + AG + GLE
Sbjct: 117 NQDIKKIKFSDFRD--------------KIDIVAGGFPCQPFSYAGLGK----GLEDLRG 158
Query: 550 SLFYDYFRILDLVK 563
SLF+++ R L V+
Sbjct: 159 SLFFEFARCLQEVQ 172
>gi|425471048|ref|ZP_18849908.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9701]
gi|389883163|emb|CCI36438.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9701]
Length = 412
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQT 491
L +L+ + P V+ LF+G GG + L G++ + +V ++ VN + R W
Sbjct: 57 ELRILQTVEPTNYTVIELFAGCGGMALGLENAGLKTQLLVEINQDCVNTLRLNRPQWNVI 116
Query: 492 NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKES 549
NQ I F+D + D+V GG PC + AG + GLE
Sbjct: 117 NQDIKKIKFSDFRD--------------KIDIVAGGFPCQPFSYAGLGK----GLEDLRG 158
Query: 550 SLFYDYFRILDLVK 563
SLF+++ R L V+
Sbjct: 159 SLFFEFARCLQEVQ 172
>gi|425436512|ref|ZP_18816948.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9432]
gi|425446714|ref|ZP_18826715.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9443]
gi|389678748|emb|CCH92417.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9432]
gi|389732936|emb|CCI03215.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9443]
Length = 412
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQT 491
L +L+ + P V+ LF+G GG + L G++ + +V ++ VN + R W
Sbjct: 57 ELRILQTVEPTNYTVIELFAGCGGMALGLENAGLKTQLLVEINQDCVNTLRLNRPQWNVI 116
Query: 492 NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKES 549
NQ I F+D + D+V GG PC + AG + GLE
Sbjct: 117 NQDIKKIKFSDFRD--------------KIDIVAGGFPCQPFSYAGLGK----GLEDLRG 158
Query: 550 SLFYDYFRILDLVK 563
SLF+++ R L V+
Sbjct: 159 SLFFEFARCLQEVQ 172
>gi|390438626|ref|ZP_10227076.1| Modification methylase Eco47II [Microcystis sp. T1-4]
gi|389837957|emb|CCI31200.1| Modification methylase Eco47II [Microcystis sp. T1-4]
Length = 412
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQT 491
L +L+ + P V+ LF+G GG + L G++ + +V ++ VN + R W
Sbjct: 57 ELRILQTVEPTNYTVIELFAGCGGMALGLENAGLKTQLLVEINQDCVNTLRLNRPQWNVI 116
Query: 492 NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKES 549
NQ I F+D + D+V GG PC + AG + GLE
Sbjct: 117 NQDIKKIKFSDFRD--------------KIDIVAGGFPCQPFSYAGLGK----GLEDLRG 158
Query: 550 SLFYDYFRILDLVK 563
SLF+++ R L V+
Sbjct: 159 SLFFEFARCLQEVQ 172
>gi|109947738|ref|YP_664966.1| site-specific DNA methyltransferase [Helicobacter acinonychis str.
Sheeba]
gi|109714959|emb|CAJ99967.1| site-specific DNA methyltransferase [Helicobacter acinonychis str.
Sheeba]
Length = 327
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E ++NI ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEQAGFKI-----VIANEYDKNITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L N I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTNEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLKELK 104
>gi|441511021|ref|ZP_20992918.1| putative modification methylase [Gordonia aichiensis NBRC 108223]
gi|441444914|dbj|GAC50879.1| putative modification methylase [Gordonia aichiensis NBRC 108223]
Length = 340
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 14/115 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V S F+GIGG ++ + M+ V + E +I+ W + D+Q
Sbjct: 21 VRVASFFAGIGGFDLGFENSEM-METVWQCEKKEFCLDILEKHWPNVPRA------TDIQ 73
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
Q+ AN I + ++ GG PC +++ + R GL GK+S LFYD+ ++
Sbjct: 74 QVKANDIPEA-------EIWAGGFPCQDVSLARMGPRSGLRGKQSGLFYDFAELI 121
>gi|425467447|ref|ZP_18846730.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9809]
gi|389829771|emb|CCI28632.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9809]
Length = 412
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQT 491
L +L+ + P V+ LF+G GG + L G++ + +V ++ VN + R W
Sbjct: 57 ELKILQTVEPTNYTVIELFAGCGGMALGLENAGLKTQLLVEINQDCVNTLRLNRPQWNVI 116
Query: 492 NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKES 549
NQ I F+D + D+V GG PC + AG + GLE
Sbjct: 117 NQDIKKIKFSDFRD--------------KIDVVAGGFPCQPFSYAGLGK----GLEDLRG 158
Query: 550 SLFYDYFRILDLVK 563
SLF+++ R L V+
Sbjct: 159 SLFFEFARCLQEVQ 172
>gi|282879499|ref|ZP_06288233.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
gi|281306646|gb|EFA98672.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
Length = 438
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I + ++FSGIG E AL RL ++ V + DI + N +S++ + K F D +
Sbjct: 62 IRLGTMFSGIGAIEHALQRLRLKHHIVFAGDI---DANCKKSYFANYDIKEKDW-FNDAR 117
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
DA + G DL++GG+PC A S R G E +LFY++ R++
Sbjct: 118 TFDARKYR------GQIDLLVGGAPCQ--AFSMVGKRLGFEDARGTLFYEFARVI 164
>gi|440751643|ref|ZP_20930846.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa TAIHU98]
gi|440176136|gb|ELP55409.1| DNA-cytosine methyltransferase family protein [Microcystis
aeruginosa TAIHU98]
Length = 412
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQT 491
L +L+ + P V+ LF+G GG + L G++ + +V ++ VN + R W
Sbjct: 57 ELRILQTVEPTNYTVIELFAGCGGMALGLENAGLKTQLLVEINQDCVNTLRLNRPQWNVI 116
Query: 492 NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKES 549
NQ I F+D + D+V GG PC + AG + GLE
Sbjct: 117 NQDIKKIKFSDFRD--------------KIDVVAGGFPCQPFSYAGLGK----GLEDLRG 158
Query: 550 SLFYDYFRILDLVK 563
SLF+++ R L V+
Sbjct: 159 SLFFEFARCLQEVQ 172
>gi|91976449|ref|YP_569108.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB5]
gi|91682905|gb|ABE39207.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris BisB5]
Length = 490
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 19/120 (15%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V SLF+GIGG + A + + V +I R ++R W QT F D+
Sbjct: 27 LRVASLFAGIGGFDKAFESVSASV--VAQCEIDSFCRAVLRRHWPQTKL------FEDIT 78
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLA-GSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+++ F D+ G PC +++ H RDGL+G +SLF F+++DL +
Sbjct: 79 KINPAE-------FPAADIWTAGFPCQDVSLARGNHGRDGLKGNHTSLF---FKLMDLAE 128
>gi|257058000|ref|YP_003135888.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|256588166|gb|ACU99052.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 423
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 21/122 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVD---ISEVNRNIVRSWWEQTNQKGTLIDFA 501
++V+ LF+G GG + L G++ + +V +D ++ + +N R +W + T IDF
Sbjct: 73 LSVIELFAGCGGMALGLENAGLKTELLVEIDRDCVNTLQKN--RPYWPIIQEDVTKIDFR 130
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
Q G D+V+GG PC + + + G E +LF+++ R L
Sbjct: 131 SYQ--------------GKIDIVLGGFPCQAFSYAGKGK--GFEDTRGTLFFEFARCLAE 174
Query: 562 VK 563
V+
Sbjct: 175 VQ 176
>gi|433484057|ref|ZP_20441283.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2002038]
gi|432220743|gb|ELK76560.1| DNA (cytosine-5-)-methyltransferase family protein [Neisseria
meningitidis 2002038]
Length = 269
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
V SLF+GIGG ++ + G V+I+ V R ++ + Q F DV+
Sbjct: 7 TVGSLFAGIGGFDLGFEQAG--FDTAWQVEINPVPRAVLTDRFPYAKQ------FEDVRT 58
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ ++ D++IGG PC +++ + + R GL G+ + LFYD RI+D +K
Sbjct: 59 V--------LSELWPVDVIIGGFPCQDVSIAGK--RKGLAGERTGLFYDAMRIVDQLK 106
>gi|336436234|ref|ZP_08615947.1| hypothetical protein HMPREF0988_01532 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336008274|gb|EGN38293.1| hypothetical protein HMPREF0988_01532 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 722
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ R G + +E+++ I ++ + N T + D++
Sbjct: 1 MQLISLFSGCGGLDLGFERAGFEIPVA-----NEIDKKIWATF--RANHPKTHLIEGDIR 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+++ +++ ++ G D +IGG PC + S S G+E LF+DY RIL
Sbjct: 54 KVNKEDLQEFLS--GEVDGIIGGPPCQSW--SEAGSLKGIEDARGQLFFDYIRIL 104
>gi|29566487|ref|NP_818053.1| gp80 [Mycobacterium phage Che9d]
gi|29425212|gb|AAN07998.1| gp80 [Mycobacterium phage Che9d]
Length = 252
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKG---TLIDFA 501
+NVLSLFSGIGG E+ L R G M V V+I+ R I+ W + T +++
Sbjct: 1 MNVLSLFSGIGGLELGLERAG--MTVVGQVEINPYCRQILAKHWPHVPRHDDVRTTVEWW 58
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
+ ++ DL+ GG PC ++ SN +R G+ G +SSL+ +L
Sbjct: 59 ESEERPR------------VDLICGGFPCQDI--SNAGARKGITGPKSSLWGG---MLHT 101
Query: 562 VKNMMQR 568
V+N+ R
Sbjct: 102 VRNIRPR 108
>gi|422302441|ref|ZP_16389804.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9806]
gi|389788313|emb|CCI16067.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9806]
Length = 412
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 59/134 (44%), Gaps = 21/134 (15%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQT 491
L +L+ + P V+ LF+G GG + L G++ + +V ++ VN + R W
Sbjct: 57 ELKILQTVEPTNYTVIELFAGCGGMALGLENAGLKTQLLVEINQDCVNTLRLNRPQWNVI 116
Query: 492 NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKES 549
NQ I F+ N D+V GG PC + AG + GLE
Sbjct: 117 NQDIKKIKFS--------------NFIDKIDIVAGGFPCQPFSYAGLGK----GLEDLRG 158
Query: 550 SLFYDYFRILDLVK 563
SLF+++ R L V+
Sbjct: 159 SLFFEFARCLQEVQ 172
>gi|402492999|ref|ZP_10839755.1| DNA-cytosine methyltransferase [Aquimarina agarilytica ZC1]
Length = 699
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 15/113 (13%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
+L LFSG GG + L + G + K SEV+ + + ++ Q N K I VQ++
Sbjct: 11 LLDLFSGTGGFALGLQQAGFKFKKHY---FSEVDTHAIANY--QYNFKNA-IYVGAVQEI 64
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+IE+ D++ GSPC NL+ + + R+GL G++S LF++ ++
Sbjct: 65 TKQKIERP-------DIITFGSPCQNLSTAGK--REGLYGEKSRLFFEAIAVI 108
>gi|308235652|ref|ZP_07666389.1| DcmB [Gardnerella vaginalis ATCC 14018 = JCM 11026]
gi|311115197|ref|YP_003986418.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis ATCC
14019]
gi|310946691|gb|ADP39395.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis ATCC
14019]
Length = 333
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWE--QTNQKGTLIDFAD 502
+ VLSLFSG GG ++ + G + D ++ W+ + N T + D
Sbjct: 1 MKVLSLFSGCGGLDLGFEKAGFEIPVANEFD---------KTIWDTFKINHPKTHLIEGD 51
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
V+++ N I + ++ G D +IGG PC + AGS R G++ LF+DY RIL
Sbjct: 52 VRKVSKNDISEYLS--GNLDGIIGGPPCQSWSEAGSLR----GIDDDRGKLFFDYIRIL 104
>gi|124009653|ref|ZP_01694325.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134]
gi|123984703|gb|EAY24688.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134]
Length = 354
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLFSG+GG ++A R+G NV +V+ + + I+R +W T I + D++Q D
Sbjct: 5 SLFSGLGGFDLAAQRMG--WTNVFTVENNPFCQTILRHYWPDT------IHYEDIRQTD- 55
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRD 542
+G DL+ GG PC AG R + D
Sbjct: 56 -----FTPHYGQIDLLTGGFPCQPFSQAGKRRGAAD 86
>gi|148826164|ref|YP_001290917.1| modification methylase [Haemophilus influenzae PittEE]
gi|386266072|ref|YP_005829564.1| cytosine-specific DNA methyltransferase [Haemophilus influenzae
R2846]
gi|148716324|gb|ABQ98534.1| modification methylase [Haemophilus influenzae PittEE]
gi|162532590|gb|ABY16693.1| probable methylase [Haemophilus influenzae]
gi|309973308|gb|ADO96509.1| Probable cytosine-specific DNA methyltransferase [Haemophilus
influenzae R2846]
Length = 409
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 26/126 (20%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE-------VNRNIVRSWWEQTNQKGTL 497
I + ++FSGIG E A+ RL + + + + DI N + W
Sbjct: 35 IRLATVFSGIGAIEQAMKRLKLNHEIIFAGDIDPHVKKSYLANYQLSEEHWH-------- 86
Query: 498 IDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
+D+ DA + I DL++GGSPC A S R GLE +LFYD+ R
Sbjct: 87 ---SDITTFDATPYREQI------DLLVGGSPCQ--AFSMVGKRHGLEDTRGTLFYDFAR 135
Query: 558 ILDLVK 563
+++ K
Sbjct: 136 VVNETK 141
>gi|307191164|gb|EFN74862.1| DNA (cytosine-5)-methyltransferase 3A [Camponotus floridanus]
Length = 704
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDI-SEVNRNIVRSWWEQTNQKGTLIDFADV 503
I VLSLF G+ + L LG+ VV V SE+++N + + T + DV
Sbjct: 401 IRVLSLFDGLSTGFLVLLNLGI----VVDVYYASEIDKNALTISSAHFGDRITYL--GDV 454
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS--LFYDYFRILDL 561
+ + +I+++ DL+IGGSPCN+L+ N +R GL + + LF++Y RI L
Sbjct: 455 RDITKEKIQEI----APIDLLIGGSPCNDLSLVN-PARLGLHDPKGTGILFFEYCRIKKL 509
Query: 562 VK 563
+K
Sbjct: 510 MK 511
>gi|416221799|ref|ZP_11625950.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 103P14B1]
gi|326564851|gb|EGE15057.1| DNA-cytosine methyltransferase [Moraxella catarrhalis 103P14B1]
Length = 288
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 60/115 (52%), Gaps = 12/115 (10%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF+GIGG +V + G V+I+ V R ++ + Q FADV+
Sbjct: 18 SLFAGIGGFDVGFEKAGFHTS--WQVEINPVCRAVLSDRFPHAKQ------FADVKTC-L 68
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + N G D++ GG PC +++ + + R GL+GK +SLF++ I+D +K
Sbjct: 69 PELLSLPNG-GQVDVIAGGFPCQDVSVAGK--RAGLKGKRTSLFFNAMDIVDTLK 120
>gi|323650700|gb|ADX97434.1| M2.BspACI [Psychrobacillus psychrodurans]
Length = 444
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSGIGG E L V K V S +I + + + N G D+
Sbjct: 86 LKIVSLFSGIGGFEAGLEESNVSGKIVFSSEIDRFAKISYEANFPNHNLHG------DIT 139
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++DA + DL+IGG PC A S SR+G E +LF+D RI+
Sbjct: 140 KIDAKDVPNH-------DLLIGGFPCQ--AFSIAGSREGFEDIRGTLFFDVARII 185
>gi|386747419|ref|YP_006220627.1| site-specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384553661|gb|AFI05417.1| site-specific DNA methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 230
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E +++I ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKI-----VVANEYDKSITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L N I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQINEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLKELK 104
>gi|334128221|ref|ZP_08502118.1| DNA-cytosine methyltransferase [Centipeda periodontii DSM 2778]
gi|333388016|gb|EGK59202.1| DNA-cytosine methyltransferase [Centipeda periodontii DSM 2778]
Length = 535
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + SLFSG GG E LG + + + SE+ +R T + ++ D+
Sbjct: 2 MTLGSLFSGSGGFE-----LGAVLAGITPIWASEIEPFPIRV---TTKRLPSVKHLGDIH 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + IE + D++ GSPC NL+ + R R+GL G ES LF++ RI+
Sbjct: 54 RIHGDEIEPV-------DIITFGSPCTNLSIAGR--REGLHGTESVLFFEAIRIV 99
>gi|425451385|ref|ZP_18831207.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 7941]
gi|389767369|emb|CCI07230.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 7941]
Length = 412
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQT 491
L VL+ + P V+ LF+G GG + L G++ + +V ++ VN + R W
Sbjct: 57 ELRVLQTVEPTNYTVIELFAGCGGMALGLENAGLKTQLLVEINQDCVNTLRLNRPQWNVI 116
Query: 492 NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKES 549
NQ + F+D + D++ GG PC + AG + GLE
Sbjct: 117 NQDIKKLKFSDFRD--------------KIDVIAGGFPCQPFSYAGLGK----GLEDLRG 158
Query: 550 SLFYDYFRILDLVK 563
SLF+++ R L V+
Sbjct: 159 SLFFEFARCLQEVQ 172
>gi|308229522|gb|ADO24174.1| M.AclI [Acinetobacter calcoaceticus]
Length = 458
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVD--ISEVNRNIVRSWWEQTNQKGTLIDFAD 502
+ +SLFSG GG + GVR+ + D IS++ R+ S + N D
Sbjct: 121 LKAISLFSGCGGLCLGFSAAGVRIAGFIEKDKHISQIYRDNFSSTPQLAN---------D 171
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
+ L IEQ ++ G D+VIGG PC + S + + K LF +Y + +
Sbjct: 172 ITSLSHKDIEQYKDSIGEIDIVIGGPPCQGFSLSGKRDKSDARNK---LFENYLDFVTVF 228
Query: 563 K 563
K
Sbjct: 229 K 229
>gi|224078173|ref|XP_002196308.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B [Taeniopygia
guttata]
Length = 811
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 14/107 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF G+ L LG++++ ++ +I E + VR +G + D
Sbjct: 525 IRVLSLFDGVTTGYTVLKDLGIQVEKYIASEICENPIAMGKVRP-------EGNITYVHD 577
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKES 549
V+ + IE+ +G FDLVIGGSPC++++ N +R L GK +
Sbjct: 578 VRNITKRNIEE----WGPFDLVIGGSPCDDVSLVN-PTRKALFGKAA 619
>gi|239625135|ref|ZP_04668166.1| EaeI methyltransferase alpha subunit [Clostridiales bacterium
1_7_47_FAA]
gi|239519365|gb|EEQ59231.1| EaeI methyltransferase alpha subunit [Clostridiales bacterium
1_7_47FAA]
Length = 301
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 15/111 (13%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
S FSGIGG ++ L + G+ + V +I + +++ W D+ +L
Sbjct: 5 SFFSGIGGIDLGLEKSGIEI--VYQCEILSFGQKVLKKHWPNIPLS------QDITKLTG 56
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
I ++ GG PC +L+ +N+ R GLEG S LFY Y ++
Sbjct: 57 KDIPDA-------EIFAGGFPCQDLSLANQGKRKGLEGARSGLFYKYAELI 100
>gi|440800899|gb|ELR21928.1| DNA methyltransferase dnmt5, putative [Acanthamoeba castellanii
str. Neff]
Length = 865
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 41/206 (19%)
Query: 251 YFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLP 310
+F ENVA + IS + VEP +DSK R R Y HN+P ++ LP
Sbjct: 615 FFLLENVASMSRKDKTKISDCM-GVEPVRIDSKDITNVRRNRYYWHNIP----RNINALP 669
Query: 311 PQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLT-ERIRKALEECDGEPEPPHHVQK 369
E L S D + L + CI + T E ++K+LEE P+
Sbjct: 670 KATFQELL--------SQDGEA-LVLVGGCITTHNATMEYLKKSLEELLARPQ------- 713
Query: 370 FVMDECRKWNLVWV-GRNKLAPLEPDEVEMLLGF------PKNHTRGGG--------ISR 414
+ +++N + + G++K L+ E+E +LGF + +T+ G +++
Sbjct: 714 ----DLKRYNTIKIKGQDKCRSLKATEMERILGFRTKDSNEREYTKEGRDINGRVYILTK 769
Query: 415 TDRYKSLGNSFQVDTVAYHLSVLKEM 440
R K LG SF +A+ L+ L ++
Sbjct: 770 AQRNKLLGQSFDTRVIAHLLTPLLKL 795
>gi|308185228|ref|YP_003929361.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180]
gi|308061148|gb|ADO03044.1| DNA-cytosine methyltransferase [Helicobacter pylori SJM180]
Length = 368
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 43/154 (27%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVN---------------------RNI 483
+ V S+FSGIG E AL RL + + + + D ++ +N
Sbjct: 2 LKVASVFSGIGAFEWALKRLDLEHEILFACDNGNIDLKLDYDAELNKIKSLSSIKEKKNY 61
Query: 484 VRSWWEQTNQKGTLID--------------FADVQQLDANRIEQMINAFGGFDLVIGGSP 529
+ ++Q ++K + F D++ LD + D+++GGSP
Sbjct: 62 TNNLYKQHSRKTNFVKQSYLANYTIQNDCFFQDIKLLDGTDFTDKV------DILVGGSP 115
Query: 530 CNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
C + S+ ++ GLE +LFYDY R+L+ +K
Sbjct: 116 CQSF--SSIGNKLGLEDTRGTLFYDYIRVLNEIK 147
>gi|217033005|ref|ZP_03438476.1| hypothetical protein HPB128_151g1 [Helicobacter pylori B128]
gi|298736554|ref|YP_003729080.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
gi|216945262|gb|EEC23940.1| hypothetical protein HPB128_151g1 [Helicobacter pylori B128]
gi|298355744|emb|CBI66616.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori B8]
Length = 327
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E ++NI ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKI-----VVANEYDKNITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLKELK 104
>gi|166365618|ref|YP_001657891.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
gi|166087991|dbj|BAG02699.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 412
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQT 491
L +L+ + P V+ LF+G GG + L G++ + +V ++ VN + R W
Sbjct: 57 ELKILQTVEPTNYTVIELFAGCGGMALGLENAGLKTQLLVEINQDCVNTLRLNRPQWNVI 116
Query: 492 NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKES 549
NQ I F++ + D+V GG PC + AG + GLE
Sbjct: 117 NQDIKKIKFSNFRD--------------KIDIVAGGFPCQPFSYAGLGK----GLEDLRG 158
Query: 550 SLFYDYFRILDLVK 563
SLF+++ R L V+
Sbjct: 159 SLFFEFARCLQEVQ 172
>gi|421715162|ref|ZP_16154480.1| modification methylase HaeIII [Helicobacter pylori R036d]
gi|407216016|gb|EKE85854.1| modification methylase HaeIII [Helicobacter pylori R036d]
Length = 327
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E ++NI ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKI-----VVANEYDKNITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLKELK 104
>gi|373854861|ref|ZP_09597658.1| DNA-cytosine methyltransferase [Opitutaceae bacterium TAV5]
gi|372471643|gb|EHP31656.1| DNA-cytosine methyltransferase [Opitutaceae bacterium TAV5]
Length = 323
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 19/119 (15%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + SLF+GIGG ++ R G R V+I+ +NR ++ + + F DV+
Sbjct: 45 LTIGSLFAGIGGFDLGFERAGWR--TAWQVEINPLNRAVLAHRFPHAAR------FEDVR 96
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLA--GSNRHSRD--GLEGKESSLFYDYFRIL 559
+ A + ++ D + G PC +++ G NR + GL GK S LF++ RIL
Sbjct: 97 AVGAQELCKV-------DCITAGFPCQDISTCGYNRKDKSAVGLAGKRSGLFFEVVRIL 148
>gi|420398587|ref|ZP_14897800.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
gi|393015261|gb|EJB16432.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
Length = 327
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E ++NI ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKI-----VVANEYDKNITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLRELK 104
>gi|385227087|ref|YP_005787011.1| site-specific DNA methyltransferase [Helicobacter pylori SNT49]
gi|344332000|gb|AEN17030.1| site-specific DNA methyltransferase [Helicobacter pylori SNT49]
Length = 327
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E ++NI ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKI-----VVANEYDKNITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLRELK 104
>gi|386754039|ref|YP_006227257.1| site-specific DNA methyltransferase [Helicobacter pylori Shi112]
gi|384560297|gb|AFI00764.1| site-specific DNA methyltransferase [Helicobacter pylori Shi112]
Length = 327
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E ++NI ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKI-----VVANEYDKNITPTY--RLNHKNTRLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLRELK 104
>gi|425461897|ref|ZP_18841371.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9808]
gi|389825201|emb|CCI25262.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9808]
Length = 412
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQT 491
L +L+ + P V+ LF+G GG + L G++ + +V ++ VN + R W
Sbjct: 57 ELRILQTVEPTNYTVIELFAGCGGMALGLENAGLKTQLLVEINQDCVNTLRLNRPQWNVI 116
Query: 492 NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKES 549
NQ + F+D + D++ GG PC + AG + GLE
Sbjct: 117 NQDIKKLKFSDFRD--------------KIDVIAGGFPCQPFSYAGLGK----GLEDLRG 158
Query: 550 SLFYDYFRILDLVK 563
SLF+++ R L V+
Sbjct: 159 SLFFEFARCLQEVQ 172
>gi|336452302|ref|YP_004606768.1| DNA-cytosine methyltransferase [Helicobacter bizzozeronii CIII-1]
gi|335332329|emb|CCB79056.1| DNA-cytosine methyltransferase [Helicobacter bizzozeronii CIII-1]
Length = 332
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 21/117 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++SLF G GG ++ R G ++ V+ +E++ +I +++ + N + LI D+
Sbjct: 1 MNLISLFCGAGGLDLGFERAGFKV-----VEANEIDSSIWQTY--ENNHRAKLIR-GDIC 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
+L + AF D +IGG PC + AG+ R G+ LFY+Y R+L
Sbjct: 53 KLGS-------KAFAPCDGIIGGPPCQSWSEAGTLR----GINDPRGQLFYEYIRVL 98
>gi|188527304|ref|YP_001909991.1| site-specific DNA methyltransferase [Helicobacter pylori Shi470]
gi|386751241|ref|YP_006224461.1| site-specific DNA methyltransferase [Helicobacter pylori Shi417]
gi|386752834|ref|YP_006226053.1| site-specific DNA methyltransferase [Helicobacter pylori Shi169]
gi|188143544|gb|ACD47961.1| site-specific DNA methyltransferase [Helicobacter pylori Shi470]
gi|384557499|gb|AFH97967.1| site-specific DNA methyltransferase [Helicobacter pylori Shi417]
gi|384559092|gb|AFH99559.1| site-specific DNA methyltransferase [Helicobacter pylori Shi169]
Length = 327
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E ++NI ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKI-----VVANEYDKNITPTY--RLNHKNTRLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLRELK 104
>gi|352684729|ref|YP_004896714.1| DNA-cytosine methyltransferase [Acidaminococcus intestini RyC-MR95]
gi|350279384|gb|AEQ22574.1| DNA-cytosine methyltransferase [Acidaminococcus intestini RyC-MR95]
Length = 503
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I + SLFSG GG E LG + + V SE+ +R T + ++ + DV
Sbjct: 4 IKLGSLFSGSGGFE-----LGAILAGICPVWNSEIEPFPIRV---TTRRLPSVKHYGDVS 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ +IE + D++ GSPC +++ + + RDGL G +SSLFY RI+
Sbjct: 56 AVNGAQIEPV-------DIITFGSPCQDMSIAGK--RDGLGGSQSSLFYQAVRIV 101
>gi|329123496|ref|ZP_08252060.1| modification methylase HaeIII [Haemophilus aegyptius ATCC 11116]
gi|327471078|gb|EGF16533.1| modification methylase HaeIII [Haemophilus aegyptius ATCC 11116]
Length = 133
Score = 49.7 bits (117), Expect = 0.004, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++SLFSG GG ++ + G R+ + +E +++I +++ ++N LI D+
Sbjct: 21 MNLISLFSGAGGLDLGFQKAGFRI-----ICANEYDKSIWKTY--ESNHSAKLIK-GDIS 72
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ ++ F D +IGG PC + S S G++ LFY+Y RIL
Sbjct: 73 KISSDE-------FPKCDGIIGGPPCQSW--SEGGSLRGIDDPRGKLFYEYIRIL 118
>gi|384894101|ref|YP_005768150.1| site-specific DNA methyltransferase [Helicobacter pylori Sat464]
gi|308063355|gb|ADO05242.1| site-specific DNA methyltransferase [Helicobacter pylori Sat464]
Length = 327
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E ++NI ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKI-----VVANEYDKNITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLRELK 104
>gi|384895869|ref|YP_005769858.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
gi|384898848|ref|YP_005774227.1| Type II modification enzyme [Helicobacter pylori F30]
gi|385230134|ref|YP_005790050.1| site-specific DNA methyltransferase [Helicobacter pylori Puno135]
gi|315586485|gb|ADU40866.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 35A]
gi|317178791|dbj|BAJ56579.1| Type II modification enzyme [Helicobacter pylori F30]
gi|344336572|gb|AEN18533.1| site-specific DNA methyltransferase [Helicobacter pylori Puno135]
Length = 327
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E ++NI ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKI-----VVANEYDKNITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLRELK 104
>gi|425442866|ref|ZP_18823102.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9717]
gi|389715978|emb|CCH99730.1| Modification methylase Eco47II [Microcystis aeruginosa PCC 9717]
Length = 412
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQT 491
L +L+ + P V+ LF+G GG + L G++ + +V ++ VN + R W
Sbjct: 57 ELRILQTVEPTNYTVIELFAGCGGMALGLENAGLKTQLLVEINQDCVNTLRLNRPQWNVI 116
Query: 492 NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKES 549
NQ I F++ + D+V GG PC + AG + GLE
Sbjct: 117 NQDIKKIKFSNFRD--------------KIDIVAGGFPCQPFSYAGLGK----GLEDLRG 158
Query: 550 SLFYDYFRILDLVK 563
SLF+++ R L V+
Sbjct: 159 SLFFEFARCLQEVQ 172
>gi|420422200|ref|ZP_14921278.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
gi|393038718|gb|EJB39752.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4110]
Length = 327
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E ++NI ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKI-----VVANEYDKNITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLRELK 104
>gi|383328942|ref|YP_005354826.1| DNA-cytosine methyltransferase [Enterococcus faecium Aus0004]
gi|378938636|gb|AFC63708.1| DNA-cytosine methyltransferase [Enterococcus faecium Aus0004]
Length = 642
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + SLF G GG LG + + V SE+ +R T + + + DV
Sbjct: 4 LTLGSLFDGSGG-----FPLGGLLSGITPVWASEIEPFPIRV---TTKRLPFMKHYGDVS 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++D +IE + D++ GSPC +++ + R R+GL+G SSLFY+ RI+
Sbjct: 56 RMDGRKIEPV-------DIITFGSPCQDMSIAGR--REGLDGSRSSLFYEAVRIV 101
>gi|420401981|ref|ZP_14901172.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
gi|393017800|gb|EJB18952.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
Length = 327
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E ++NI ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKI-----VVANEYDKNITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLRELK 104
>gi|217034513|ref|ZP_03439924.1| hypothetical protein HP9810_873g29 [Helicobacter pylori 98-10]
gi|216943054|gb|EEC22533.1| hypothetical protein HP9810_873g29 [Helicobacter pylori 98-10]
Length = 327
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E ++NI ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKI-----VVANEYDKNITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLRELK 104
>gi|385216083|ref|YP_005776040.1| Type II modification enzyme [Helicobacter pylori F32]
gi|317180612|dbj|BAJ58398.1| Type II modification enzyme [Helicobacter pylori F32]
Length = 327
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E ++NI ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKI-----VVANEYDKNITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLRELK 104
>gi|420445573|ref|ZP_14944484.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-42]
gi|393062131|gb|EJB62990.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-42]
Length = 327
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E ++NI ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKI-----VIANEYDKNITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLRELK 104
>gi|238923216|ref|YP_002936731.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656]
gi|238925032|ref|YP_002938548.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656]
gi|238874890|gb|ACR74597.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656]
gi|238876707|gb|ACR76414.1| DNA-cytosine methyltransferase [Eubacterium rectale ATCC 33656]
Length = 361
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 18/123 (14%)
Query: 442 PDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
PD I + SLF GIG +A R G+R V + +I + +I + + ++
Sbjct: 2 PD-IKLGSLFDGIGVFPLAASRCGIR--PVWASEIEKAPISITKRHFPD------MVHLG 52
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
D+ ++D +I + ++ GSPC NL S +R GL G +SSLFY FRI+
Sbjct: 53 DITKVDGGKIPPV-------HIITFGSPCQNL--SLIGNRSGLAGAKSSLFYQAFRIIQE 103
Query: 562 VKN 564
+++
Sbjct: 104 MRD 106
>gi|291564095|emb|CBL42911.1| Site-specific DNA methylase [butyrate-producing bacterium SS3/4]
Length = 361
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 18/123 (14%)
Query: 442 PDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
PD I + SLF GIG +A R G+R V + +I + +I + + ++
Sbjct: 2 PD-IKLGSLFDGIGVFPLAASRCGIR--PVWASEIEKAPISITKRHFPD------MVHLG 52
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
D+ ++D +I + ++ GSPC NL S +R GL G +SSLFY FRI+
Sbjct: 53 DITKVDGGKIPPV-------HIITFGSPCQNL--SLIGNRSGLAGAKSSLFYQAFRIIQE 103
Query: 562 VKN 564
+++
Sbjct: 104 MRD 106
>gi|323484993|ref|ZP_08090347.1| hypothetical protein HMPREF9474_02098 [Clostridium symbiosum
WAL-14163]
gi|323401735|gb|EGA94079.1| hypothetical protein HMPREF9474_02098 [Clostridium symbiosum
WAL-14163]
Length = 361
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 18/123 (14%)
Query: 442 PDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
PD I + SLF GIG +A R G+R V + +I + +I + + ++
Sbjct: 2 PD-IKLGSLFDGIGVFPLAASRCGIR--PVWASEIEKAPISITKRHFPD------MVHLG 52
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
D+ ++D +I + ++ GSPC NL S +R GL G +SSLFY FRI+
Sbjct: 53 DITKVDGGKIPPV-------HIITFGSPCQNL--SLIGNRSGLAGAKSSLFYQAFRIIQE 103
Query: 562 VKN 564
+++
Sbjct: 104 MRD 106
>gi|428779076|ref|YP_007170862.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428693355|gb|AFZ49505.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 468
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 17/128 (13%)
Query: 436 VLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKG 495
+LK + + LF+GIGG +AL +LG + + SE++R+ R +++
Sbjct: 17 LLKSFCQNRFTFIDLFAGIGGFRIALEKLGGK-----CLGYSEIDRD-AREVYQK----- 65
Query: 496 TLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFY 553
I++ + ++D ++Q+ + DL++GG PC ++AG + G + L++
Sbjct: 66 NFINYVNSDEIDLGDVKQIHHLPWRIDLIVGGVPCQPWSIAGKS----GGFDDPRGRLWF 121
Query: 554 DYFRILDL 561
D RI++L
Sbjct: 122 DVIRIVEL 129
>gi|163938820|ref|YP_001643704.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4]
gi|163861017|gb|ABY42076.1| DNA-cytosine methyltransferase [Bacillus weihenstephanensis KBAB4]
Length = 350
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 25/117 (21%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRN---IVRSWWEQTNQKGTLIDFADVQQ 505
S+F+GIGG + + G + V +EV+RN R +W KG + ADV +
Sbjct: 9 SMFAGIGGTCLGFQQAGAEI-----VWANEVDRNASITYRHFW-----KGEYLQEADVTE 58
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
+D I Q+ D++IGG PC A S R G E + ++F F+ILD++
Sbjct: 59 VDKTTISQL-------DILIGGFPCQ--AFSIAGYRKGFEDERGNMF---FQILDVI 103
>gi|160893193|ref|ZP_02073981.1| hypothetical protein CLOL250_00739 [Clostridium sp. L2-50]
gi|160945817|ref|ZP_02093043.1| hypothetical protein FAEPRAM212_03350 [Faecalibacterium prausnitzii
M21/2]
gi|156865276|gb|EDO58707.1| C-5 cytosine-specific DNA methylase [Clostridium sp. L2-50]
gi|158443548|gb|EDP20553.1| C-5 cytosine-specific DNA methylase [Faecalibacterium prausnitzii
M21/2]
Length = 361
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 18/123 (14%)
Query: 442 PDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
PD I + SLF GIG +A R G+R V + +I + +I + + ++
Sbjct: 2 PD-IKLGSLFDGIGVFPLAASRCGIR--PVWASEIEKAPISITKRHFPD------MVHLG 52
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
D+ ++D +I + ++ GSPC NL S +R GL G +SSLFY FRI+
Sbjct: 53 DITKVDGGKIPPV-------HIITFGSPCQNL--SLIGNRSGLAGAKSSLFYQAFRIIQE 103
Query: 562 VKN 564
+++
Sbjct: 104 MRD 106
>gi|218244975|ref|YP_002370346.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|218165453|gb|ACK64190.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
Length = 423
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 21/133 (15%)
Query: 434 LSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVD---ISEVNRNIVRSWWEQ 490
VL+ ++V+ LF+G GG + L G++ + +V +D ++ + +N R +W
Sbjct: 62 FKVLESSQKTELSVIELFAGCGGMALGLENAGLKTELLVEIDRDCVNTLQKN--RPYWPI 119
Query: 491 TNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS 550
+ T IDF Q G D+V GG PC + + + G E +
Sbjct: 120 LQEDVTKIDFRSYQ--------------GKIDIVSGGFPCQAFSYAGKGK--GFEDTRGT 163
Query: 551 LFYDYFRILDLVK 563
LF+++ R L V+
Sbjct: 164 LFFEFARCLAEVQ 176
>gi|354998145|gb|AER49474.1| gp64 [Mycobacterium phage SG4]
Length = 252
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 16/124 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+NVLSLFSGIGG E+ L R G M V V+I+ R ++ W + D
Sbjct: 1 MNVLSLFSGIGGLELGLERAG--MTVVGQVEINPYCRQVLAKHWPDVPRHD---DVRTTV 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
+ A+ + DL+ GG PC ++ SN +R G+ G +SSL+ +L V+N
Sbjct: 56 EWWASEERPRV------DLICGGFPCQDI--SNAGARKGITGPKSSLWGG---MLHAVRN 104
Query: 565 MMQR 568
+ R
Sbjct: 105 IRPR 108
>gi|420475827|ref|ZP_14974496.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
gi|393091693|gb|EJB92320.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-21]
Length = 327
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E ++NI ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEQAGFKI-----VVANEYDKNITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLRELK 104
>gi|257867242|ref|ZP_05646895.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC30]
gi|257873577|ref|ZP_05653230.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC10]
gi|257801298|gb|EEV30228.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC30]
gi|257807741|gb|EEV36563.1| DNA-cytosine methyltransferase [Enterococcus casseliflavus EC10]
Length = 373
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 18/130 (13%)
Query: 436 VLKEMYP-DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQK 494
+ KEM + + SLF GIG +A + G+ + SE+ + +R Q
Sbjct: 11 IYKEMIRITNLTLGSLFDGIGVFPLAAQKQGITLSWA-----SEIEKAPIRI---TKKQF 62
Query: 495 GTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYD 554
+I D+ +L +I + D+V GSPC NL S +R+GL GK+S+LFY+
Sbjct: 63 PHMIHLGDLTKLHGGKIPPV-------DIVTFGSPCQNL--STIGNREGLAGKKSNLFYE 113
Query: 555 YFRILDLVKN 564
RI++ +++
Sbjct: 114 AIRIIEEMRD 123
>gi|421881766|ref|ZP_16313071.1| DNA-cytosine methyltransferase [Helicobacter bizzozeronii CCUG
35545]
gi|375316037|emb|CCF81067.1| DNA-cytosine methyltransferase [Helicobacter bizzozeronii CCUG
35545]
Length = 332
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 21/117 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++SLF G GG ++ R G ++ ++ +E++ +I +++ + N + LI D+
Sbjct: 1 MNLISLFCGAGGLDLGFERAGFKV-----IEANEIDSSIWQTY--ENNHRAKLIR-GDIC 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
+L + AF D +IGG PC + AG+ R G+ LFY+Y R+L
Sbjct: 53 KLGS-------KAFAPCDGIIGGPPCQSWSEAGTLR----GINDPRGQLFYEYIRVL 98
>gi|213691014|ref|YP_002321600.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|384198113|ref|YP_005583856.1| putative DNA methylase [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|213522475|gb|ACJ51222.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis ATCC 15697 = JCM 1222]
gi|320457065|dbj|BAJ67686.1| putative DNA methylase [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
Length = 390
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 11/118 (9%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
L F+GIG A + L G + S DI + R+ + Q+ TLI+ D+ +L
Sbjct: 18 ALEFFAGIGLARLGLEEAGFHV--AWSNDIDHAKCQMYRNQFGNNEQEHTLIE-GDMGEL 74
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
+ + I+ + G SPC +++ + +R GL GK+SS F+ Y R+L+ + N
Sbjct: 75 HGSDLPHNIS------IAWGSSPCTDISLAG--TRTGLNGKQSSAFWQYIRLLEEMGN 124
>gi|416256572|ref|ZP_11639748.1| DNA-cytosine methyltransferase [Moraxella catarrhalis O35E]
gi|326573696|gb|EGE23654.1| DNA-cytosine methyltransferase [Moraxella catarrhalis O35E]
Length = 408
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 12/115 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I + ++FSGIG E AL RL + V + DI N V+ + + +D+
Sbjct: 34 IRLATVFSGIGAIEQALKRLNLNHSIVFANDID----NFVKKSYLANYELDEKNWHSDIT 89
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
DA + + D+++GGSPC A S R GLE +LFYD+ R++
Sbjct: 90 TFDATPYKNQV------DILVGGSPCQ--AFSMVGKRLGLEDTRGTLFYDFARVV 136
>gi|449018909|dbj|BAM82311.1| probable DNA (cytosine-5)-methyltransferase 3 [Cyanidioschyzon
merolae strain 10D]
Length = 758
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 62/118 (52%), Gaps = 13/118 (11%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
VLSLF G+ A AL L + ++ SE++R+ + +Q ++ V+ L
Sbjct: 388 VLSLFDGLASARHALALLQI-PPTLIRYYASEIDRDALAV---AQSQYPDVLQLGPVEHL 443
Query: 507 DA-NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
A + I + I DL+IGGSPC +L+G + R GL S+LF+++ RI ++K
Sbjct: 444 AAFDDIPEQI------DLLIGGSPCTSLSGLGK--RKGLYHGTSALFFEFLRIKRVMK 493
>gi|355646953|ref|ZP_09054739.1| hypothetical protein HMPREF1030_03825 [Pseudomonas sp. 2_1_26]
gi|354828285|gb|EHF12410.1| hypothetical protein HMPREF1030_03825 [Pseudomonas sp. 2_1_26]
Length = 382
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 22/127 (17%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTN 492
+L L+++ P V LFSGIGG E+ H G + + + +D V ++++
Sbjct: 2 NLEKLQDLKP---KVCGLFSGIGGLELGFHLNGFQSQMLCEID--PVAAHVLK------- 49
Query: 493 QKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLF 552
+ F +V+ +D R +++ G D++ G PC NL+ S ++ G+ G +SSL
Sbjct: 50 -----VRFPNVELIDDVR---DVSSLRGADVLCAGFPCQNLSSSG--NKVGINGSQSSLV 99
Query: 553 YDYFRIL 559
+ FR+L
Sbjct: 100 DEVFRVL 106
>gi|319897026|ref|YP_004135221.1| modification methylase haeiii [Haemophilus influenzae F3031]
gi|317432530|emb|CBY80890.1| Modification methylase HaeIII [Haemophilus influenzae F3031]
Length = 330
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++SLFSG GG ++ + G R+ + +E +++I +++ ++N LI D+
Sbjct: 1 MNLISLFSGAGGLDLGFQKAGFRI-----ICANEYDKSIWKTY--ESNHSAKLIK-GDIS 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ ++ F D +IGG PC + S S G++ LFY+Y RIL
Sbjct: 53 KISSDE-------FPKCDGIIGGPPCQSW--SEGGSLRGIDDPRGKLFYEYIRIL 98
>gi|283466067|emb|CBG92842.1| hypothetical protein [Enterococcus casseliflavus]
Length = 359
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 17/116 (14%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF GIG +A + G+ + SE+ + +R Q +I D+ +L
Sbjct: 11 SLFDGIGVFPLAAQKQGITLSWA-----SEIEKAPIRI---TKKQFPHMIHLGDLTKLHG 62
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
+I + D+V GSPC NL S +R+GL GK+S+LFY+ RI++ +++
Sbjct: 63 GKIPPV-------DIVTFGSPCQNL--STIGNREGLAGKKSNLFYEAIRIIEEMRD 109
>gi|319776343|ref|YP_004138831.1| Modification methylase HaeIII [Haemophilus influenzae F3047]
gi|127460|sp|P20589.1|MTH3_HAEAE RecName: Full=Modification methylase HaeIII; Short=M.HaeIII;
AltName: Full=Cytosine-specific methyltransferase HaeIII
gi|148915|gb|AAA24970.1| methyltransferase [Haemophilus aegyptius]
gi|2961233|gb|AAC05696.1| HaeIII DNA modification methyltransferase [Haemophilus influenzae
biotype aegyptius]
gi|317450934|emb|CBY87160.1| Modification methylase HaeIII [Haemophilus influenzae F3047]
Length = 330
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++SLFSG GG ++ + G R+ + +E +++I +++ ++N LI D+
Sbjct: 1 MNLISLFSGAGGLDLGFQKAGFRI-----ICANEYDKSIWKTY--ESNHSAKLIK-GDIS 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ ++ F D +IGG PC + S S G++ LFY+Y RIL
Sbjct: 53 KISSDE-------FPKCDGIIGGPPCQSW--SEGGSLRGIDDPRGKLFYEYIRIL 98
>gi|420414315|ref|ZP_14913435.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|420419420|ref|ZP_14918510.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393026649|gb|EJB27746.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393031326|gb|EJB32398.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 369
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 44/155 (28%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDI-----------SEVNR-----------N 482
+ V S+FSGIG E AL RL + + + + D +E+N+ N
Sbjct: 2 LKVASVFSGIGAFEWALKRLDLEHEILFACDNGNIDLKDLDYEAELNKIKSLSNIKEKSN 61
Query: 483 IVRSWWEQTNQKGTLID--------------FADVQQLDANRIEQMINAFGGFDLVIGGS 528
+ ++Q ++K + F D++ LD + D+++GGS
Sbjct: 62 YTNNLYKQHSRKTNFVKQSYLANYTIQNDCFFQDIKLLDGTDFTDKV------DILVGGS 115
Query: 529 PCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
PC + S+ ++ GLE +LFYDY R+L+ +K
Sbjct: 116 PCQSF--SSIGNKLGLEDTRGTLFYDYIRVLNEIK 148
>gi|322801270|gb|EFZ21957.1| hypothetical protein SINV_06528 [Solenopsis invicta]
Length = 1113
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 28/167 (16%)
Query: 400 LGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEV 459
L + K +TR + RT + S VD Y KE P + VLSLF G+ +
Sbjct: 759 LDWKKRYTR---MFRTSKLTS-----DVDITHYK----KENRP--VRVLSLFDGLSTGFL 804
Query: 460 ALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF-ADVQQLDANRIEQMINAF 518
L +LG+ ++ + +I +VN + S G I + DV+ + +I+++
Sbjct: 805 VLQKLGLVVEVYYASEI-DVNALTISS-----AHFGDRISYLGDVRGITKEKIQEI---- 854
Query: 519 GGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS--LFYDYFRILDLVK 563
DL+IGGSPCN+L+ N +R GL + LF++Y RI LV+
Sbjct: 855 APIDLLIGGSPCNDLSLVN-PARLGLHDPRGTGVLFFEYCRIKKLVE 900
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 94/229 (41%), Gaps = 40/229 (17%)
Query: 251 YFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPL- 309
++ +ENVA P I++ L EP+ +DS F R R Y HNLP + +PL
Sbjct: 909 FWLFENVASMPTEYRLEINKNL-GREPDVIDSADFSPQHRLRLYWHNLPF---NPYMPLF 964
Query: 310 -PPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQ 368
QN+ + L +LN C +T R L+ G+ E +
Sbjct: 965 ESRQNVQDKLT------------PNLNREALCKKLRTVTGRKGSLLQ---GKAELKPIIM 1009
Query: 369 KFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVD 428
K D +W+ E+E + GFP+++T +S T+R K LG S+ V
Sbjct: 1010 KGKTD------TIWIT----------ELEEIFGFPRHYTDVKNLSATNRQKILGKSWSVQ 1053
Query: 429 TVAYHLSVLKEMYP---DGINVLSLFSGIGGAEVALHRLGVRMKNVVSV 474
T+ L L + D N + + A + LHR + +V++
Sbjct: 1054 TLTAILRPLCSYFKCNEDETNNILCEAHDSSATLRLHRHKEHLDAIVTM 1102
>gi|428312828|ref|YP_007123805.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
gi|428254440|gb|AFZ20399.1| DNA-methyltransferase Dcm [Microcoleus sp. PCC 7113]
Length = 666
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 10/121 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I LSLFSG GG ++A H G ++ ++ ++ V I +Q G ++ +
Sbjct: 56 IRTLSLFSGGGGLDIAFHDCGFQIVQMIELEAKYVQTLI------HNSQPGKRLENSSAV 109
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRD--GLEGKESSLFYDYFRILDLV 562
+D E N D +IGG PC + + R + G +LF +Y RIL +
Sbjct: 110 CIDIR--EYSPNPDLKVDFIIGGPPCQTFSAAGRRASGVAGTSDARGTLFQEYVRILKTL 167
Query: 563 K 563
+
Sbjct: 168 Q 168
>gi|1127162|pdb|1DCT|A Chain A, Dna (Cytosine-5) Methylase From Haeiii Covalently Bound To
Dna
gi|1127163|pdb|1DCT|B Chain B, Dna (Cytosine-5) Methylase From Haeiii Covalently Bound To
Dna
Length = 324
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++SLFSG GG ++ + G R+ + +E +++I +++ ++N LI D+
Sbjct: 1 MNLISLFSGAGGLDLGFQKAGFRI-----ICANEYDKSIWKTY--ESNHSAKLIK-GDIS 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ ++ F D +IGG PC + S S G++ LFY+Y RIL
Sbjct: 53 KISSDE-------FPKCDGIIGGPPCQ--SWSEGGSLRGIDDPRGKLFYEYIRIL 98
>gi|332016329|gb|EGI57242.1| DNA (cytosine-5)-methyltransferase 3B [Acromyrmex echinatior]
Length = 778
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 64/122 (52%), Gaps = 12/122 (9%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
+ VLSLF G+ + L +LG+ + + +I +VN + S + + DV
Sbjct: 483 AVRVLSLFDGLSTGFLVLQKLGLVVDVYYASEI-DVNALTISS----AHFGDRITYLGDV 537
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS--LFYDYFRILDL 561
+ + +I+++ DL+IGGSPCN+L+ N +R GL + + LF++Y RI L
Sbjct: 538 RSITKEKIQEI----APIDLLIGGSPCNDLSLVN-PARLGLHDPKGTGILFFEYCRIKKL 592
Query: 562 VK 563
++
Sbjct: 593 IE 594
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 37/182 (20%)
Query: 251 YFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPL- 309
++ +ENVA P I++ L EP+ +DS F R R Y HNLP + +PL
Sbjct: 603 FWLFENVASMPTEYRLEINKNL-GREPDVIDSADFSPQHRLRLYWHNLPF---NPYMPLF 658
Query: 310 -PPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQ 368
Q++ + L +LN C +T R L+ G+ E +
Sbjct: 659 ESRQDVQDKLT------------PNLNRKALCKKLHTVTGRTGSLLQ---GKAELKPIIM 703
Query: 369 KFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVD 428
K D +W+ E+E + GFP+++T +S T+R K LG S+ V
Sbjct: 704 KGKTDT------IWIT----------ELEEIFGFPRHYTDVKNLSATNRQKILGKSWSVQ 747
Query: 429 TV 430
T+
Sbjct: 748 TL 749
>gi|312902260|ref|ZP_07761468.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0635]
gi|310634319|gb|EFQ17602.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0635]
Length = 359
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 17/116 (14%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF GIG +A + G+ + SE+ + +R Q +I D+ +L
Sbjct: 11 SLFDGIGVFPLAAQKQGITLSWA-----SEIEKAPIRI---TKKQFPHMIHLGDLTKLHG 62
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
+I + D+V GSPC NL S +R+GL GK+S+LFY+ RI++ +++
Sbjct: 63 GKIPPV-------DIVTFGSPCQNL--STIGNREGLAGKKSNLFYEAIRIIEEMRD 109
>gi|218902126|ref|YP_002449960.1| cytosine-specific methyltransferase [Bacillus cereus AH820]
gi|218538919|gb|ACK91317.1| cytosine-specific methyltransferase NlaX [Bacillus cereus AH820]
Length = 350
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 25/117 (21%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRN---IVRSWWEQTNQKGTLIDFADVQQ 505
S+F+GIGG + + G + V +EV+RN R +W KG + ADV +
Sbjct: 9 SMFAGIGGTCLGFQQAGAEI-----VWANEVDRNASITYRHFW-----KGEYLQEADVTE 58
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
+D I Q+ D++IGG PC A S R G E + ++F F+ILD++
Sbjct: 59 VDKTTIPQL-------DILIGGFPCQ--AFSIAGYRKGFEDERGNMF---FQILDVI 103
>gi|239622757|ref|ZP_04665788.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|239514754|gb|EEQ54621.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
infantis CCUG 52486]
Length = 390
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
L F+GIG A + L G + S DI + R+ + Q+ TLI+ D+ +
Sbjct: 17 QALEFFAGIGLARLGLEEAGFHV--AWSNDIDHAKCQMYRNQFGNNEQEHTLIE-GDMGE 73
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
L + + I+ + G SPC +++ + +R GL GK+SS F+ Y R+L+ + N
Sbjct: 74 LHGSDLPHDIS------IAWGSSPCTDISLAG--TRTGLNGKQSSAFWQYIRLLEEMGN 124
>gi|149190453|ref|ZP_01868724.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1]
gi|148835707|gb|EDL52673.1| DNA-cytosine methyltransferase [Vibrio shilonii AK1]
Length = 373
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 15/109 (13%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V S F+GIGG ++ R G M+ V +++ + +++ W ++ +D++ L
Sbjct: 83 VASFFAGIGGFDLGCERAG--MEVVFQCEVNSFCQKVLKKHWP------SIPLHSDIKTL 134
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDY 555
A+ I ++ GG PC +++ +N+ R GL+G+ S LFY Y
Sbjct: 135 SASDIPDA-------NIWCGGFPCQDVSLANQGKRKGLKGERSGLFYTY 176
>gi|296114006|ref|YP_003627944.1| DNA-cytosine methyltransferase [Moraxella catarrhalis RH4]
gi|295921700|gb|ADG62051.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BBH18]
Length = 410
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 12/115 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I + ++FSGIG E AL RL + V + DI N V+ + + +D+
Sbjct: 36 IRLATVFSGIGAIEQALKRLNLNHSIVFANDID----NFVKKSYLANYELDEKNWHSDIT 91
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
DA + + D+++GGSPC A S R GLE +LFYD+ R++
Sbjct: 92 TFDATPYKNQV------DVLVGGSPCQ--AFSMVGKRLGLEDTRGTLFYDFARVV 138
>gi|449124105|ref|ZP_21760424.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola OTK]
gi|448942436|gb|EMB23330.1| DNA (cytosine-5-)-methyltransferase [Treponema denticola OTK]
Length = 249
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLFSGIGG E+ R G+ K + + +I+ R I++ + +T Q + D+ +
Sbjct: 5 SLFSGIGGFELGAKRAGI--KTIWNCEINPFCRKILKKHFPETTQ------YTDITTIKN 56
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D++ GG PC +++ +N +GL GK S L+ + FRI+
Sbjct: 57 PPY---------VDIISGGFPCQDISIANPKG-EGLNGKRSGLWKEMFRII 97
>gi|417845549|ref|ZP_12491577.1| putative s-adenosyl-L-methionine-dependent methyltransferase
[Haemophilus haemolyticus M21639]
gi|341955119|gb|EGT81584.1| putative s-adenosyl-L-methionine-dependent methyltransferase
[Haemophilus haemolyticus M21639]
Length = 113
Score = 48.9 bits (115), Expect = 0.008, Method: Composition-based stats.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++SLFSG GG ++ + G R+ + +E +++I +++ ++N LI D+
Sbjct: 1 MNLISLFSGAGGLDLGFQKAGFRI-----ICANEYDKSIWKTY--ESNHSAKLIK-GDIS 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ ++ F D +IGG PC + S S G++ LFY+Y RIL
Sbjct: 53 KISSDE-------FPKCDGIIGGPPCQSW--SEGGSLRGIDDPRGKLFYEYIRIL 98
>gi|423467247|ref|ZP_17444015.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BAG6O-1]
gi|423625948|ref|ZP_17601726.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus VD148]
gi|401253295|gb|EJR59537.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus VD148]
gi|402414481|gb|EJV46813.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BAG6O-1]
Length = 350
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 25/117 (21%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRN---IVRSWWEQTNQKGTLIDFADVQQ 505
S+F+GIGG + + G + V +EV+RN R +W KG + ADV +
Sbjct: 9 SMFAGIGGTCLGFQQAGAEI-----VWANEVDRNASITYRHFW-----KGEYLQEADVTE 58
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
+D + Q+ D++IGG PC A S R G E + ++F F+ILD++
Sbjct: 59 VDKTTVPQL-------DILIGGFPCQ--AFSIAGYRKGFEDERGNMF---FQILDVI 103
>gi|331090172|ref|ZP_08339060.1| hypothetical protein HMPREF1025_02643 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330402118|gb|EGG81690.1| hypothetical protein HMPREF1025_02643 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 681
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 17/119 (14%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
M + + + SLF G GG LG + + V SE+ +R T + +
Sbjct: 1 MEQNKLTLGSLFDGSGG-----FPLGGLISGITPVWASEIEPFPIRV---TTKRLPFMKH 52
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
+ DV ++D +IE + D++ GSPC +++ + R R+GL+G SSLFY+ RI
Sbjct: 53 YGDVSRMDGGKIEPV-------DIITFGSPCQDMSIAGR--REGLDGSRSSLFYEAVRI 102
>gi|424033621|ref|ZP_17773034.1| modification methylase HaeIII [Vibrio cholerae HENC-01]
gi|424037455|ref|ZP_17776242.1| modification methylase HaeIII [Vibrio cholerae HENC-02]
gi|408874280|gb|EKM13454.1| modification methylase HaeIII [Vibrio cholerae HENC-01]
gi|408895524|gb|EKM31886.1| modification methylase HaeIII [Vibrio cholerae HENC-02]
Length = 337
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 20/119 (16%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
++S F+G GG ++ + G NV + E +++I ++ + N T +D + +
Sbjct: 5 IVSFFAGAGGLDLGFEQAGF---NVTWAN--EYDKDIWATY--EKNHPHTTLDRRSITNI 57
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
DA+ + + D +IGG PC + AG+ R G+E K LF+D+ RIL+ K
Sbjct: 58 DADEVPEC-------DGIIGGPPCQSWSEAGAQR----GIEDKRGQLFFDFIRILEAKK 105
>gi|357052782|ref|ZP_09113886.1| hypothetical protein HMPREF9467_00858 [Clostridium clostridioforme
2_1_49FAA]
gi|355386207|gb|EHG33247.1| hypothetical protein HMPREF9467_00858 [Clostridium clostridioforme
2_1_49FAA]
Length = 415
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 373 DECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAY 432
DE K NL+ G + L P E E L P N+T GIS RYK +GN + + + +
Sbjct: 284 DEKYKINLL-DGYYTIRKLTPIECERLQTLPDNYT--DGISNAQRYKCIGNGWTAEVIIH 340
Query: 433 HLSVLK--EMYPDGINVLSLFSGIGGAEVALHRLG 465
LS + + YP I VLS++ GI L +LG
Sbjct: 341 ILSYIDFPKDYP--IEVLSMYDGIATGRYCLEKLG 373
>gi|420489567|ref|ZP_14988159.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|420523508|ref|ZP_15021926.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
gi|393104988|gb|EJC05539.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-11]
gi|393125857|gb|EJC26309.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-11b]
Length = 368
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 43/154 (27%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVN---------------------RNI 483
+ V S+FSGIG E AL RL + + + + D ++ +N
Sbjct: 2 LKVASVFSGIGAFEWALKRLDLEHEILFACDNGNIDLKLDYDAELNKIKSLSSIKEKKNY 61
Query: 484 VRSWWEQTNQKGTLID--------------FADVQQLDANRIEQMINAFGGFDLVIGGSP 529
+ ++Q ++K + F D++ D + D+++GGSP
Sbjct: 62 TNNLYKQHSRKTNFVKQSYLANYTIQNDCFFQDIKLFDGTDFTDKV------DILVGGSP 115
Query: 530 CNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
C + S+ ++ GLE +LFYDY R+L+ +K
Sbjct: 116 CQSF--SSIGNKLGLEDTRGTLFYDYIRVLNEIK 147
>gi|385800071|ref|YP_005836475.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228]
gi|309389435|gb|ADO77315.1| DNA-cytosine methyltransferase [Halanaerobium praevalens DSM 2228]
Length = 328
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 10/123 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLI-DFADV 503
+N + LFSG GG + G +N+ S+ E N ++ + + ++ D AD+
Sbjct: 2 LNYIDLFSGAGGMSCGFEKAG--FENIFSL---EFNPEFAETYKKNFPKNNLIVKDIADI 56
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + +I + D+++GG PC + + R R +E + LF ++ RI+ +VK
Sbjct: 57 SEPEVKKIIGETDV----DVIVGGPPCQGFSLAGRIGRTFIEDDRNYLFNEFVRIVSIVK 112
Query: 564 NMM 566
M
Sbjct: 113 PEM 115
>gi|317127844|ref|YP_004094126.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
gi|315472792|gb|ADU29395.1| DNA-cytosine methyltransferase [Bacillus cellulosilyticus DSM 2522]
Length = 360
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V+ LFSG GG G R+ + + N + V ++ + + AD+Q++
Sbjct: 5 VIDLFSGCGGISE-----GFRLAGFDILGGLDFNPDAVETFHQNFLNSRAIC--ADIQEI 57
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
+ I M + G D+++GG PC + +NR ++ + + LFY+Y R +++
Sbjct: 58 KNDEITYMFDLTGDIDVIVGGPPCQGFSSANRWQKE-MADPRNKLFYEYIRFVEV 111
>gi|225377327|ref|ZP_03754548.1| hypothetical protein ROSEINA2194_02974 [Roseburia inulinivorans DSM
16841]
gi|225210858|gb|EEG93212.1| hypothetical protein ROSEINA2194_02974 [Roseburia inulinivorans DSM
16841]
Length = 361
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 18/123 (14%)
Query: 442 PDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
PD I + SLF GIG +A R G+R V + +I + +I + + G
Sbjct: 2 PD-IKLGSLFDGIGVFPLAASRCGIR--PVWASEIEKAPISITKRHFPDMAHLG------ 52
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
D+ ++D +I + ++ GSPC NL S +R GL G +SSLFY FRI+
Sbjct: 53 DITKVDGGKIPPV-------HVITFGSPCQNL--SLIGNRSGLAGAKSSLFYQAFRIIQE 103
Query: 562 VKN 564
+++
Sbjct: 104 MRD 106
>gi|338210458|ref|YP_004654507.1| DNA-cytosine methyltransferase [Runella slithyformis DSM 19594]
gi|336304273|gb|AEI47375.1| DNA-cytosine methyltransferase [Runella slithyformis DSM 19594]
Length = 348
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 19/119 (15%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ LF+GIGG +AL LG + + S W+ QK +F +
Sbjct: 25 FTFIDLFAGIGGFRMALQSLG--------------GQCVFSSEWDPQAQKTYAANFGEKP 70
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
D + E GFD++ GG PC + + R R G E +LF+D + D+++
Sbjct: 71 FGDITKEETKSQIPDGFDMLCGGFPCQAFSIAGR--RGGFEDTRGTLFFD---VADIIR 124
>gi|320108256|ref|YP_004183846.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4]
gi|319926777|gb|ADV83852.1| DNA-cytosine methyltransferase [Terriglobus saanensis SP1PR4]
Length = 347
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
V SLF+GIGG ++ R G R V V+I+ + ++ + + +AD++
Sbjct: 4 FTVGSLFAGIGGIDLGFERAGFR--TVWQVEINPYCQRVLAKNFPHAER------YADIR 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ A+ ++ + D+++GG PC ++ SN R G+ G+ S L+ +Y RI+
Sbjct: 56 ECGAHNLKPV-------DVIVGGFPCQDI--SNAGKRAGITGERSGLWGEYARIV 101
>gi|396576851|emb|CBY99471.1| Phi92_gp043 [Enterobacteria phage phi92]
Length = 329
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VLSLF G+ G +AL G+ + + SE+++ + Q N F D+
Sbjct: 1 MKVLSLFDGMSGGMLALKSAGIEVDTYYA---SELDKFAIAE--SQAN-------FPDII 48
Query: 505 QL-DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
QL D + + +G DL++GGSPC + S + + S LF++Y IL+ +K
Sbjct: 49 QLGDVTKWREWDIPWGEIDLLLGGSPCQGFSSSGKGL--NFQDPRSKLFFEYVEILEHIK 106
Query: 564 NM 565
Sbjct: 107 KF 108
>gi|395505491|ref|XP_003757074.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B [Sarcophilus
harrisii]
Length = 795
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 43/119 (36%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++ V++ I+ W
Sbjct: 550 IRVLSLFDGIATGYLVLKELGIK-----------VDKYIIDEW----------------- 581
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
G FDL+IGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 582 --------------GPFDLLIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 625
>gi|417996763|ref|ZP_12637038.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei M36]
gi|410534759|gb|EKQ09397.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei M36]
Length = 337
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 16/122 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVD--ISEVNRNIVRSWWEQTNQKGTLIDFAD 502
IN + LF+G GG L + G+ +K V +D IS++ +E + K +I+ +D
Sbjct: 3 INAIDLFAGCGGLTEGLEQAGITVKYAVELDPRISKI--------YEGNHHKTIMIN-SD 53
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHS-RDGLEGKESSLFYDYFRILDL 561
++++ + +M G D+V G PC NR++ R K + L +Y R + +
Sbjct: 54 IRRISDDDFRRM----GHVDIVAGCPPCQGFTQMNRNNKRRAYSDKRNILIEEYLRAVKI 109
Query: 562 VK 563
+K
Sbjct: 110 IK 111
>gi|291557370|emb|CBL34487.1| Site-specific DNA methylase [Eubacterium siraeum V10Sc8a]
Length = 361
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 24/126 (19%)
Query: 442 PDGINVLSLFSGIGGAEVALHRLGVR---MKNVVSVDISEVNRNIVRSWWEQTNQKGTLI 498
PD I + SLF GIG +A R G+R + IS R+ ++
Sbjct: 2 PD-IKLGSLFDGIGVFPLAASRCGIRPAWASEIEKAPISITKRHFP-----------DMV 49
Query: 499 DFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
D+ ++D +I + ++ GSPC NL S +R GL G +SSLFY FRI
Sbjct: 50 HLGDITKVDGGKIPPV-------HVITFGSPCQNL--SLIGNRSGLAGAKSSLFYQAFRI 100
Query: 559 LDLVKN 564
+ +++
Sbjct: 101 IQEMRD 106
>gi|315654722|ref|ZP_07907628.1| modification methylase NgoPII [Mobiluncus curtisii ATCC 51333]
gi|315491186|gb|EFU80805.1| modification methylase NgoPII [Mobiluncus curtisii ATCC 51333]
Length = 360
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
M +G+NV+SLFSG GG ++ + G + +E + I ++ + N T +
Sbjct: 1 MRKNGMNVISLFSGCGGLDLGFEQAGFNIPVA-----NEFDPTIYETF--KANHPHTHLI 53
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFR 557
D++ + I I+ G +IGG PC + AG+ R G+E LFYDY R
Sbjct: 54 EGDIRGVTIEDIAPFID--GEVAGIIGGPPCQSWSEAGALR----GIEDARGQLFYDYIR 107
Query: 558 IL 559
IL
Sbjct: 108 IL 109
>gi|399116811|emb|CCG19620.1| modification methylase HhaI [Taylorella asinigenitalis 14/45]
Length = 324
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 18/116 (15%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
G + LFSGIGG VAL LG + + S W++ ++ I+F ++
Sbjct: 11 GFTFIDLFSGIGGFRVALQSLGAKC--------------LFSSDWDRYAKETYWINFKEL 56
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D +I+ + D++ G PC + S + R G E +LF+D RI+
Sbjct: 57 PHDDITKID--LKFIPEHDILCAGFPCQAFSISGK--RLGFEDSRGTLFFDVIRIV 108
>gi|348590059|ref|YP_004874521.1| DNA-cytosine methyltransferase [Taylorella asinigenitalis MCE3]
gi|347973963|gb|AEP36498.1| DNA-cytosine methyltransferase [Taylorella asinigenitalis MCE3]
Length = 325
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
G+ + LFSGIGG VAL LG + + S W++ ++ I+F ++
Sbjct: 11 GLTFIDLFSGIGGFRVALQSLGAKC--------------LFSSDWDRYAKETYWINFKEL 56
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
D +I+ I D++ G PC + S + R G E +LF+D RI
Sbjct: 57 PHDDITKID--IKFIPEHDILCAGFPCQAFSISGK--RLGFEDSRGTLFFDVVRI 107
>gi|315222611|ref|ZP_07864500.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
gi|315188297|gb|EFU22023.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
Length = 317
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
M D +NVL LF GIG + AL R + K ++D E+++N V+S+ N D
Sbjct: 1 MKIDELNVLELFGGIGAIKKALIRQKIPHK---TLDYVEIDKNCVKSYNALYNT-----D 52
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLE-------GKESSLF 552
F LD + ++ I DL++ GSPC + SR GL+ G SSL
Sbjct: 53 FKPKSILDFHPPDKRI------DLLMHGSPCQDF------SRSGLKKGGEKGSGTRSSLL 100
Query: 553 YDYFRILDLVK 563
++ RI++ +K
Sbjct: 101 FETIRIIEEMK 111
>gi|403070838|ref|ZP_10912170.1| C-5 cytosine-specific family DNA methylase [Oceanobacillus sp.
Ndiop]
Length = 351
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 11/122 (9%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
NVLS+FSG GG ++ + G + S D + + + + N+ G ++ D++
Sbjct: 3 NVLSVFSGGGGIDIGFKKAGYEI--CFSTDFWKPACDTL-----EHNKVGKMVVCDDIRN 55
Query: 506 LD-ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRD---GLEGKESSLFYDYFRILDL 561
++ A +E++ D+++GG PC + S + D LE + S Y+YFR L+
Sbjct: 56 INYAVSLEKIGMKLSDIDVLVGGPPCPAYSKSRFYRTDKKRALEDENSFTLYEYFRALEE 115
Query: 562 VK 563
++
Sbjct: 116 IR 117
>gi|347539480|ref|YP_004846905.1| hypothetical protein NH8B_1674 [Pseudogulbenkiania sp. NH8B]
gi|347539909|ref|YP_004847334.1| cytosine-specific methyltransferase [Pseudogulbenkiania sp. NH8B]
gi|345642658|dbj|BAK76491.1| hypothetical protein NH8B_1674 [Pseudogulbenkiania sp. NH8B]
gi|345643087|dbj|BAK76920.1| cytosine-specific methyltransferase [Pseudogulbenkiania sp. NH8B]
Length = 278
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 17/113 (15%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
V SLF+GIGG ++ G R V V+I+ V R ++ + Q F DV+
Sbjct: 11 TVGSLFAGIGGFDIGFENAGFR--TVWQVEINPVCRAVLADRFPHARQ------FDDVRS 62
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
+ A+ + + +++GG PC +L S + GL G+ S LFY+ RI
Sbjct: 63 IGAHNLAPVA-------VLVGGFPCQDL--STMGKQRGLAGERSGLFYEVCRI 106
>gi|319779706|ref|YP_004130619.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9]
gi|397661933|ref|YP_006502633.1| cytosine-specific methyltransferase [Taylorella equigenitalis ATCC
35865]
gi|317109730|gb|ADU92476.1| DNA-cytosine methyltransferase [Taylorella equigenitalis MCE9]
gi|394350112|gb|AFN36026.1| cytosine-specific methyltransferase [Taylorella equigenitalis ATCC
35865]
gi|399115775|emb|CCG18578.1| cytosine-specific methyltransferase [Taylorella equigenitalis
14/56]
Length = 329
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 18/116 (15%)
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD 502
+G+ + LF+GIGG VAL LG + + S W++ ++ ++F +
Sbjct: 10 EGLTFIDLFAGIGGFRVALQSLGAKC--------------VFSSEWDKFAKETYWLNFNE 55
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
+ D +I++ D++ G PC + S + R G E +LF+D RI
Sbjct: 56 IAHDDITKIDEC--TIPNHDILCAGFPCQAFSISGK--RLGFEDSRGTLFFDVVRI 107
>gi|386748038|ref|YP_006221246.1| DNA-cytosine methyltransferase [Helicobacter cetorum MIT 99-5656]
gi|384554280|gb|AFI06036.1| DNA-cytosine methyltransferase [Helicobacter cetorum MIT 99-5656]
Length = 437
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 20/119 (16%)
Query: 445 INVLSLFSGIGGA----EVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
+ + LF+G+GG E AL +G++ + V+S SE+ ++ ++++ + I
Sbjct: 29 VRFMDLFAGLGGLRLGFEQALSSIGLKSECVLS---SEIKKSALKAYANHFKE----IPQ 81
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ ++D N I FD+++ G PC + + + R GLE +LF++ R L
Sbjct: 82 GDITKIDTNNIPN-------FDILLAGFPCQPFSSAGK--RRGLEDTRGTLFFEIMRFL 131
>gi|423068110|ref|ZP_17056898.1| hypothetical protein HMPREF9682_00119 [Streptococcus intermedius
F0395]
gi|355367001|gb|EHG14714.1| hypothetical protein HMPREF9682_00119 [Streptococcus intermedius
F0395]
Length = 318
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 33/131 (25%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSW---WEQTNQKGT 496
M D +NVL LF GIG + AL R + K +VD E+++N V+S+ +++ + +
Sbjct: 1 MKIDELNVLELFGGIGAIKKALIRQKIPHK---TVDYVELDKNCVKSYNALYDEEFEPKS 57
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLE-------GKES 549
++DF + DL++ GSPC + SR GL+ G S
Sbjct: 58 IVDFHPTDE--------------KIDLLMHGSPCQDF------SRSGLKKGGTKGSGTRS 97
Query: 550 SLFYDYFRILD 560
SL ++ RI++
Sbjct: 98 SLLFETIRIIE 108
>gi|404483313|ref|ZP_11018536.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
gi|404343586|gb|EJZ69947.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
OBRC5-5]
Length = 325
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 17/127 (13%)
Query: 436 VLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKG 495
+L+ M + +NVL LF GIG AL R + K +D E+++N V+S+ N
Sbjct: 5 LLEVMKIETLNVLELFGGIGAIRKALIRQKIPHK---VIDYVEIDKNCVKSYNALYNA-- 59
Query: 496 TLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFY 553
DF + N +Q I DL++ GSPC + AG + + G G SSL +
Sbjct: 60 ---DFKPKSIIGYNPSKQRI------DLLMHGSPCQDFSRAGLKQGGKKG-SGTRSSLLF 109
Query: 554 DYFRILD 560
+ RI++
Sbjct: 110 ETIRIIE 116
>gi|124004276|ref|ZP_01689122.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134]
gi|123990346|gb|EAY29845.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134]
Length = 391
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLFSG+GG ++A R+G NV +V+ + + I+R +W T + D++Q D
Sbjct: 5 SLFSGMGGFDLAAERMG--WVNVFTVENNPFCQTILRHYWPDTTH------YEDIRQTD- 55
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGK 547
+G DL+ GG PC + + + R G+ K
Sbjct: 56 -----FTPHYGQIDLLTGGFPCQPFSQAGK--RKGINDK 87
>gi|119382891|ref|YP_913947.1| transposase IS116/IS110/IS902 family protein [Paracoccus
denitrificans PD1222]
gi|119372658|gb|ABL68251.1| transposase IS116/IS110/IS902 family protein [Paracoccus
denitrificans PD1222]
Length = 539
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGI-GGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
++VL LFSG GG + LHR G + + +I E R + + +AD+
Sbjct: 12 LHVLDLFSGAAGGWSLGLHRAG--FMTIAACEIVEWRRILYSENFPHVRL------YADI 63
Query: 504 QQLDANRIEQMINAFGGF-DLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ L A R +++ G D+V+G PC +++ +N + G+EG+ S L+ + R++
Sbjct: 64 RDLTATR---LVSDLGCLPDIVVGSPPCQDISSANTKGK-GIEGERSGLYLEAVRLV 116
>gi|420528218|ref|ZP_15026610.1| modification methylase HaeIII [Helicobacter pylori Hp P-25c]
gi|420530086|ref|ZP_15028471.1| modification methylase HaeIII [Helicobacter pylori Hp P-25d]
gi|393134113|gb|EJC34528.1| modification methylase HaeIII [Helicobacter pylori Hp P-25c]
gi|393136415|gb|EJC36806.1| modification methylase HaeIII [Helicobacter pylori Hp P-25d]
Length = 327
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E +++I ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEQAGFKI-----VVANEYDKSITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLKELK 104
>gi|448528713|ref|ZP_21620221.1| cytosine-specific methyltransferase [Halorubrum hochstenium ATCC
700873]
gi|445710453|gb|ELZ62267.1| cytosine-specific methyltransferase [Halorubrum hochstenium ATCC
700873]
Length = 657
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKG------- 495
D I V SLF+G GG ++ L + + +DI +V + +TN K
Sbjct: 3 DKIRVASLFTGAGGLDIGFSNLS-EFEVIFHLDIMDVAVQTL-----ETNAKADTDYVEE 56
Query: 496 -TLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSR--DGLEGKESSLF 552
++I DV + D + + DLVIGG PC + + R + +G E E SLF
Sbjct: 57 DSIIRHKDVTEYDGEDLGK-----ADVDLVIGGPPCQPFSAAARRAGGIEGTESDEGSLF 111
Query: 553 YDYFRIL 559
Y ++L
Sbjct: 112 RAYVKLL 118
>gi|428777144|ref|YP_007168931.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
gi|428691423|gb|AFZ44717.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
Length = 332
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 63/145 (43%), Gaps = 33/145 (22%)
Query: 442 PDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
P G + LF+GIGG +AL LG + I S W++ Q+ +F
Sbjct: 4 PKGYKFIDLFAGIGGFRIALEDLGCQC--------------IFTSEWDKFCQQTYFANFN 49
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHS----RDGLEG-KESSLFYD 554
+ Q D +I + DL++GG PC ++AG +++ + G E + +LF+
Sbjct: 50 ETPQGDITQISE--KEIPDHDLLVGGFPCQPFSIAGVTKNNSLNLKHGFEHITQGNLFFH 107
Query: 555 YFRILDL----------VKNMMQRN 569
RIL VKN++ N
Sbjct: 108 IVRILKYKQPRAFILENVKNLLSHN 132
>gi|423262634|ref|YP_007012659.1| DNA-cytosine methyltransferase [Mycoplasma hyorhinis SK76]
gi|422035171|gb|AFX74013.1| DNA-cytosine methyltransferase [Mycoplasma hyorhinis SK76]
Length = 413
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 368 QKFVMDECRKWNLVWVGRN-KLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQ 426
QKF+ E K +L+ +N K L+ + L + K + I +
Sbjct: 17 QKFIRKEIAKKSLISTKQNNKYLILDSHYQDWKLSYKKEASSNKKIGK------------ 64
Query: 427 VDTVAYHLSVLKEM---------YPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDIS 477
++ + VLKEM Y +G + LFSG GG L G + + SV+I
Sbjct: 65 IEEKVQFIDVLKEMNKLDGWNSNYKNGYKFIDLFSGAGGLSCGLVMAG--FEPIASVEIM 122
Query: 478 EVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFG--GFDLVIGGSPCNNLA- 534
++ +K LI+ D++ D E++ N F G DL++GG PC +
Sbjct: 123 PDAVETYVYNFQNRKKKEELIETRDIR--DVKVKEELYNKFKDTGIDLIVGGFPCQGFSM 180
Query: 535 GSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
NR D +SL Y +L++VKN+
Sbjct: 181 AGNRVVDD----PRNSL---YLEMLEIVKNL 204
>gi|363900396|ref|ZP_09326901.1| hypothetical protein HMPREF9625_01561 [Oribacterium sp. ACB1]
gi|395209970|ref|ZP_10398946.1| DNA (cytosine-5-)-methyltransferase [Oribacterium sp. ACB8]
gi|361956270|gb|EHL09588.1| hypothetical protein HMPREF9625_01561 [Oribacterium sp. ACB1]
gi|394704610|gb|EJF12145.1| DNA (cytosine-5-)-methyltransferase [Oribacterium sp. ACB8]
Length = 319
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 60/123 (48%), Gaps = 17/123 (13%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
M + +NVL LF GIG AL R + K +D E+++N V+S+ N +
Sbjct: 1 MKIETLNVLELFGGIGAIRKALIRQKIPHK---VIDYVEIDKNCVKSYNALYNA-----N 52
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFR 557
F +D N E+ I DL++ GSPC + AG + + G G SSL ++ R
Sbjct: 53 FKPKSIIDYNPPEKRI------DLLMHGSPCQDFSRAGLKQGGKKG-SGTRSSLLFETIR 105
Query: 558 ILD 560
I++
Sbjct: 106 IIE 108
>gi|406660433|ref|ZP_11068565.1| Modification methylase HpaII [Cecembia lonarensis LW9]
gi|405555818|gb|EKB50824.1| Modification methylase HpaII [Cecembia lonarensis LW9]
Length = 418
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 16/115 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ LF+GIGG +A+ LG + + S W++ +K +F +V
Sbjct: 95 FKFIDLFAGIGGFRLAMQSLG--------------GKCVFSSEWDEQAKKTYFANFGEVP 140
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D + E GFD++ G PC + + R R G E +LF+D I+
Sbjct: 141 FGDITKEETKQFIPDGFDVLCAGFPCQAFSIAGR--RGGFEDTRGTLFFDVAEII 193
>gi|420497856|ref|ZP_14996416.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25]
gi|393114135|gb|EJC14653.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25]
Length = 108
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E +++I ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEQAGFKI-----VVANEYDKSITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQSW--SEAGNLKGIDDARGQLFYEYLRLLKELK 104
>gi|402834039|ref|ZP_10882645.1| C-5 cytosine-specific DNA methylase domain protein [Selenomonas sp.
CM52]
gi|402278962|gb|EJU28008.1| C-5 cytosine-specific DNA methylase domain protein [Selenomonas sp.
CM52]
Length = 534
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + SLFSG GG E+ G++ K SE+ VR T + ++ D+
Sbjct: 5 LTLGSLFSGSGGFELGGVLAGIQPKWA-----SEIEPFPVRV---TTKRLPSVRHLGDIH 56
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+D IE + D++ GSPC +L+ + + R GLEG++S LF++ RI+
Sbjct: 57 AIDGGEIEPV-------DIITFGSPCTDLSIAGK--RAGLEGRQSCLFFEAVRII 102
>gi|294651999|ref|ZP_06729281.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter haemolyticus
ATCC 19194]
gi|292822115|gb|EFF81036.1| DNA (cytosine-5-)-methyltransferase [Acinetobacter haemolyticus
ATCC 19194]
Length = 336
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 16/119 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ + G + +E +++I ++ + N T +D +
Sbjct: 3 LKIVSLFSGAGGLDLGFQKAGFNITFA-----NEFDKDIWATY--EYNHPNTHLDKRSIT 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ N + + D +IGG PC + S +R G++ K LF+D+ RIL K
Sbjct: 56 EIKENEVPEC-------DGIIGGPPCQSW--SEGGARRGIDDKRGQLFFDFIRILKAKK 105
>gi|126700764|ref|YP_001089661.1| DNA-methyltransferase [Clostridium difficile 630]
gi|115252201|emb|CAJ70040.1| putative DNA-methyltransferase [Clostridium difficile 630]
Length = 541
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRM-KNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
NV+ LF+G GG LG M K V E N N +++ E ++ + D++
Sbjct: 3 NVIDLFAGAGGLS-----LGFEMTKKFNMVAFVEKNDNAAKTYLEN---HPSVKRYCDIK 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEG 546
+LD + ++N+ D+VIGG PC + +NR R + G
Sbjct: 55 RLD---FQDILNSVDKIDVVIGGPPCQGFSNANRQKRKIING 93
>gi|421711967|ref|ZP_16151308.1| modification methylase HaeIII [Helicobacter pylori R030b]
gi|407211459|gb|EKE81327.1| modification methylase HaeIII [Helicobacter pylori R030b]
Length = 327
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E +++I ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEQAGFKI-----VVANEYDKSITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLKELK 104
>gi|408370532|ref|ZP_11168308.1| DNA-cytosine methyltransferase [Galbibacter sp. ck-I2-15]
gi|407744015|gb|EKF55586.1| DNA-cytosine methyltransferase [Galbibacter sp. ck-I2-15]
Length = 363
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 20/117 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++S FSG GG ++ + G NVV + E +++I +++ E N T +D +
Sbjct: 1 MNLVSFFSGAGGLDLGFSKAGF---NVVWAN--EYDKDIWKTYEE--NHLDTFLDKRSIV 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
+ + + Q D +IGG PC + AGS R G++ K LF+D+ RIL
Sbjct: 54 DILSEEVPQC-------DGIIGGPPCQSWSEAGSLR----GIQDKRGQLFFDFIRIL 99
>gi|168335325|ref|ZP_02693422.1| DNA-cytosine methyltransferase [Epulopiscium sp. 'N.t. morphotype
B']
Length = 324
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 56/115 (48%), Gaps = 16/115 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLF+G GG ++ + G + +E ++ I ++ + N KG LI D+
Sbjct: 1 MRLISLFAGAGGLDLGFEKAGYEIAAA-----NEYDKTIWATY--EKNHKGPLIK-GDIS 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + G D +IGG PC + + + R G+E LFY+Y RIL
Sbjct: 53 KIPSADFPD------GIDGIIGGPPCQSWSAAGRLR--GIEDPRGRLFYEYIRIL 99
>gi|444375291|ref|ZP_21174586.1| site-specific DNA methyltransferase [Helicobacter pylori A45]
gi|443620139|gb|ELT80590.1| site-specific DNA methyltransferase [Helicobacter pylori A45]
Length = 327
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E +++I ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEKAGFKI-----VVANEYDKSITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLRELK 104
>gi|420453683|ref|ZP_14952519.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-8]
gi|420482428|ref|ZP_14981065.1| modification methylase HaeIII [Helicobacter pylori Hp P-2]
gi|420512850|ref|ZP_15011333.1| modification methylase HaeIII [Helicobacter pylori Hp P-2b]
gi|425432873|ref|ZP_18813414.1| modification methylase HaeIII [Helicobacter pylori GAM100Ai]
gi|393069432|gb|EJB70229.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-8]
gi|393099662|gb|EJC00244.1| modification methylase HaeIII [Helicobacter pylori Hp P-2]
gi|393157913|gb|EJC58174.1| modification methylase HaeIII [Helicobacter pylori Hp P-2b]
gi|410714596|gb|EKQ72060.1| modification methylase HaeIII [Helicobacter pylori GAM100Ai]
Length = 327
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G GG ++ + G ++ V +E +++I ++ + N K T + D++
Sbjct: 1 MNLLSLFAGAGGLDLGFEQAGFKI-----VVANEYDKSITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLKELK 104
>gi|428214875|ref|YP_007088019.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428003256|gb|AFY84099.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 298
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 16/118 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V S F+GIGG ++ R G M+ + +I + + I++ W + + D+
Sbjct: 1 MRVASFFAGIGGFDLGFERAG--MQVIFQCEIDKFCQAILKRHWPN------VPIYEDIT 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
L I Q DL G PC +L+ +N R GL G+ S LFY + ++ V
Sbjct: 53 TLTPATIPQS-------DLWCAGWPCQDLSNANTE-RKGLGGERSGLFYKFMELVGEV 102
>gi|434398887|ref|YP_007132891.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
gi|428269984|gb|AFZ35925.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
Length = 359
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 63/120 (52%), Gaps = 20/120 (16%)
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD 502
+ +N++SLFSG GG ++ + G ++ + ++ ++ I +++ Q N T +D D
Sbjct: 8 NNLNIVSLFSGCGGLDLGFSKAGFKI-----IWANDCDKEIWQTY--QYNHPKTYLDRRD 60
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRILD 560
++ + + I + FG +IGG PC + AGS R G++ LF +Y RIL+
Sbjct: 61 IRVIPSGDIP---DCFG----IIGGPPCQSWSEAGSQR----GIQDSRGQLFLEYIRILE 109
>gi|434397563|ref|YP_007131567.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
gi|428268660|gb|AFZ34601.1| DNA-cytosine methyltransferase [Stanieria cyanosphaera PCC 7437]
Length = 339
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 19/116 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LF+GIGG +AL ++G + S W++ QK +F +V
Sbjct: 29 LKFIDLFAGIGGMRIALEKIGASC--------------VFSSEWDKYAQKTYQANFGEVP 74
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEG-KESSLFYDYFRIL 559
D +I I FD+++ G PC + + R+G + + +LFY+ RIL
Sbjct: 75 HGDITKITTEI--IPDFDILVAGFPCQPFSSIGK--REGFQHPTQGTLFYEIIRIL 126
>gi|363890421|ref|ZP_09317758.1| hypothetical protein HMPREF9628_02047 [Eubacteriaceae bacterium
CM5]
gi|361965685|gb|EHL18660.1| hypothetical protein HMPREF9628_02047 [Eubacteriaceae bacterium
CM5]
Length = 407
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQTNQKGTLIDFADV 503
+ LF+G GG + + + G ++ D S + R W N D A++
Sbjct: 75 FKTIELFAGAGGLALGIEKAGFDTIGLIEFDKSASDTLKCNRPHWRVIND-----DIANI 129
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
LD + + G DL+ GG+PC + + + + R GLE +LFY Y + LD ++
Sbjct: 130 SCLDLEKYFDIKK--GELDLLSGGAPCQSFSYAGK--RLGLEDARGTLFYHYAKFLDKLQ 185
Query: 564 NMM 566
M
Sbjct: 186 PKM 188
>gi|347952141|gb|AEP33198.1| hypothetical protein [Enterococcus faecalis]
Length = 359
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 17/116 (14%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF GIG +A + G+ + E+ + +R Q +I D+ +L
Sbjct: 11 SLFDGIGVFPLAAQKQGITLSWA-----GEIEKAPIRI---TKKQFPHMIHLGDLTKLHG 62
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
+I + D+V GSPC NL S +R+GL GK+S+LFY+ RI++ +++
Sbjct: 63 GKIPPV-------DIVTFGSPCQNL--STIGNREGLAGKKSNLFYEAIRIIEEMRD 109
>gi|325269502|ref|ZP_08136118.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
gi|324988121|gb|EGC20088.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
Length = 393
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 26/122 (21%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE-------VNRNIVRSWWEQTNQKGTL 497
I + + FSGIG E ++HRLG++ + + DI N I + W
Sbjct: 33 IRLATSFSGIGAIEHSMHRLGLKCQIQFAGDIDANCKKTYFANYPISEAQWH-------- 84
Query: 498 IDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
DV DA + G DL +GG+PC + +H G E +LF ++ R
Sbjct: 85 ---TDVHDFDAKPYK------GKVDLFVGGAPCQAFSLRGKHG--GFEDTRGTLFREFAR 133
Query: 558 IL 559
I+
Sbjct: 134 IV 135
>gi|294667855|ref|ZP_06733064.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292602358|gb|EFF45800.1| DNA cytosine-5 -methyltransferase PliMCI [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 410
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 10/116 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+G GG G+R S+ +E++ +++ N GT +D D++
Sbjct: 11 LTSLDLFAGAGGLSE-----GLREAGFTSLYANEISPRYAQTY--AVNHPGTQVDSQDIR 63
Query: 505 QLDANRIEQMIN-AFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++DA ++ +++ G DL+ GG PC S + E + LF +Y R +
Sbjct: 64 KVDARKVRKLLGLKRGELDLIAGGPPCQGF--SINAPKRSTEDSRNHLFREYLRFV 117
>gi|357290807|gb|AET73407.1| modification methylase [Emiliania huxleyi virus PS401]
Length = 441
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 15/110 (13%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
+ PD I V + SG+ AL LG++ K++ S +I + R + EQ +GTL
Sbjct: 112 LLPDRIRVATDCSGLDAPIHALRLLGIKHKHIFSSEIEKA----ARCFLEQNYSEGTL-- 165
Query: 500 FADVQQLDANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDGLEGKE 548
F D+ Q D AF G DL + G PC + + N +D KE
Sbjct: 166 FGDISQRDV--------AFAGESDLFVAGFPCQSFSMMNAKKKDTDARKE 207
>gi|376262805|ref|YP_005149525.1| site-specific DNA methylase [Clostridium sp. BNL1100]
gi|373946799|gb|AEY67720.1| site-specific DNA methylase [Clostridium sp. BNL1100]
Length = 621
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 9/60 (15%)
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ DV LD +IE + D++ GSPC +++ + + RDGL+G+ SSLFYD RI+
Sbjct: 52 YGDVSCLDGGKIEPV-------DIITFGSPCQDMSVAGK--RDGLDGERSSLFYDAIRIV 102
>gi|427739200|ref|YP_007058744.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
gi|427374241|gb|AFY58197.1| DNA-methyltransferase Dcm [Rivularia sp. PCC 7116]
Length = 348
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 20/117 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++SLFSG GG ++ G NV+ + E +++I ++ + N T +D D++
Sbjct: 1 MNIVSLFSGCGGLDLGFEEAGF---NVIWAN--EYDKSIWDTY--EFNHPNTQLDKRDIR 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + I I +IGG PC + AG+ R G++ LF+DY RIL
Sbjct: 54 KIVPDDIPDCIG-------IIGGPPCQSWSEAGAQR----GIDDSRGRLFFDYIRIL 99
>gi|41019146|sp|P09389.1|MTBB_BPSPB RecName: Full=Modification methylase SPBetaI; Short=M.SPBetaI;
AltName: Full=Cytosine-specific methyltransferase
SPBetaI
Length = 257
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIG E AL +GV + + SE+++ ++S+ N TL + D+
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGV---DYELIGFSEIDKYAIKSYCAIHNVSETL-NVGDIS 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
+ + I FDL+ G PC + + RDG+E K S+ +++
Sbjct: 60 KAKKDNIPY-------FDLLTSGFPCPTFSVAG--GRDGMEYKCSNCSHEHL 102
>gi|428318000|ref|YP_007115882.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
gi|428241680|gb|AFZ07466.1| DNA-cytosine methyltransferase [Oscillatoria nigro-viridis PCC
7112]
Length = 359
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 20/118 (16%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
++++SLF G GG + LG R+ +V +E +++I ++ N T++D D+
Sbjct: 13 ALDIISLFCGCGGLD-----LGFRLAGFNAVWANEYDKSIWDTY--NFNHPETILDRRDI 65
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
+++ ++ I I +IGG PC + AG+ R G++ LF++Y RI+
Sbjct: 66 RKIKSDEIPNCIG-------IIGGPPCQSWSEAGAKR----GIDDSRGQLFWEYIRIV 112
>gi|293371778|ref|ZP_06618188.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f]
gi|292633230|gb|EFF51801.1| DNA (cytosine-5-)-methyltransferase [Bacteroides ovatus SD CMC 3f]
Length = 337
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++SLFSG GG ++ H+ G ++ V +E + I ++ + N T + D++
Sbjct: 1 MNLISLFSGAGGLDLGFHKAGFKV-----VTANEFDAKICPTF--RANFSDTNLIEGDIR 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ ++ I +IGG PC + S S G+E LFY+Y RIL
Sbjct: 54 DIPSSEFPDNIAG------IIGGPPCQSW--SEAGSLKGIEDARGQLFYEYIRIL 100
>gi|418962280|ref|ZP_13514147.1| modification methylase HpaII [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383345928|gb|EID24012.1| modification methylase HpaII [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 450
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG + L R G + V +I + R ++ +E + I+F D++
Sbjct: 1 MKFLDLFAGIGGFRLGLERQG--HECVGFCEIDKFARKSYKAMYETEGE----IEFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
Q+ Q+ G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 QVTDQNFRQLR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|422870872|ref|ZP_16917365.1| modification methylase Sau96I [Streptococcus sanguinis SK1087]
gi|328946253|gb|EGG40397.1| modification methylase Sau96I [Streptococcus sanguinis SK1087]
Length = 333
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 62/123 (50%), Gaps = 10/123 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+ LF+G GG + + R G S+ + E ++ + ++N+ + D++
Sbjct: 1 MKVIELFAGAGGLALGIERAGFE-----SIGLIEFDKAASETL--KSNRPDWNVIHEDIE 53
Query: 505 QLDANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ +E++ N G DL+ GG+PC + + + +R GLE +LFY Y LD ++
Sbjct: 54 KISPLNLEELFNIRKGELDLLSGGAPCQSFSYAG--NRLGLEDARGTLFYHYAVFLDKLQ 111
Query: 564 NMM 566
M
Sbjct: 112 PKM 114
>gi|220926735|ref|YP_002502037.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060]
gi|219951342|gb|ACL61734.1| DNA-cytosine methyltransferase [Methylobacterium nodulans ORS 2060]
Length = 454
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 21/142 (14%)
Query: 434 LSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQ 493
++ ++EM +G NV+S F+G GG+ G R+ + + + E R R+
Sbjct: 79 MAEIREMPWNGFNVISTFAGGGGSSTGYRMAGYRI--LFASEFVEAARETYRA----NAS 132
Query: 494 KGTLIDFADVQQLDANRIEQMINAF----GGFDLVIGGSPCNNLAGSNRHSR-------- 541
T++D D++QL A E ++ A G D++ G PC + + + + +
Sbjct: 133 PSTILDGRDIRQLTA---EDLLFATGLKPGELDILDGSPPCASFSTAGKREKGWGTVKAY 189
Query: 542 DGLEGKESSLFYDYFRILDLVK 563
+ + LF++Y R++D V+
Sbjct: 190 SDTQQRSDDLFFEYARLIDGVR 211
>gi|295646365|gb|ADG23068.1| DNA (cytosine-5)-methyltransferase 3a [Gadus morhua]
Length = 130
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 491 TNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS 550
+G ++ DV+ + I++ +G FDLVIGGSPCN+L+ N +R GL
Sbjct: 9 VRHQGRIMYVGDVRNVTRKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLFEGTGR 63
Query: 551 LFYDYFRIL 559
LF++++R+L
Sbjct: 64 LFFEFYRLL 72
>gi|419538899|ref|ZP_14078247.1| DNA-cytosine methyltransferase [Campylobacter coli 90-3]
gi|380516588|gb|EIA42719.1| DNA-cytosine methyltransferase [Campylobacter coli 90-3]
Length = 703
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 21/114 (18%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +AL LG + V +E++ + ++++ E N T D+ +LD
Sbjct: 7 IDLFAGIGGFRLALESLGAK-----CVFSAEIDPHAIQTYKENFNDDPT----CDITKLD 57
Query: 508 ANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRIL 559
RI FD++ G PC +++G + D G +LF+D RIL
Sbjct: 58 PKRIPD-------FDILCAGFPCQAFSISGKQKGFSDTTRG---TLFFDICRIL 101
>gi|308814119|ref|XP_003084365.1| possible site-specific DNA-methyltransferase (ISS) [Ostreococcus
tauri]
gi|116056249|emb|CAL58430.1| possible site-specific DNA-methyltransferase (ISS) [Ostreococcus
tauri]
Length = 625
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V SLF+GIGG +V L R G R+ V+ V+ R ++ K D A V+
Sbjct: 4 LRVASLFAGIGGFDVGLERAGHRV--VLQVEKDPRCRRVL---------KRRFPDVALVR 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLE-GKESSLFYDYFRIL 559
+ E + +A G DL++ G PCN+ + N +R GL G + L FR+L
Sbjct: 53 DV----AEVLPHALDGVDLLVAGFPCNDCSFEN-PTRPGLRYGHSTRLVRHVFRLL 103
>gi|420487387|ref|ZP_14985991.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|420521170|ref|ZP_15019601.1| modification methylase BanI [Helicobacter pylori Hp P-8b]
gi|393101964|gb|EJC02530.1| cytosine-specific methyltransferase [Helicobacter pylori Hp P-8]
gi|393127757|gb|EJC28202.1| modification methylase BanI [Helicobacter pylori Hp P-8b]
Length = 423
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 20/119 (16%)
Query: 445 INVLSLFSGIGGA----EVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
+ + LF+G+GG E AL +G++ + V+S +I + + +++T Q
Sbjct: 18 VRFVDLFAGLGGLRLGFEQALFSIGLKSQCVLSSEIKKSALQAYINHFKETPQ------- 70
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
DV Q+D N I FD+++ G PC + + + R GL+ +LF++ R L
Sbjct: 71 GDVTQIDTNAIPN-------FDILLAGFPCQPFSSAGK--RRGLDDTRGTLFFEIMRFL 120
>gi|160947479|ref|ZP_02094646.1| hypothetical protein PEPMIC_01413 [Parvimonas micra ATCC 33270]
gi|158446613|gb|EDP23608.1| modification methylase HaeIII [Parvimonas micra ATCC 33270]
Length = 348
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 436 VLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKG 495
+L+ Y +N++SLFSG GG ++ R G N+V + E ++ I ++ + N K
Sbjct: 2 ILRRKYK--MNLVSLFSGAGGLDLGFERAGF---NIVVAN--EYDKTIWETY--EKNHKT 52
Query: 496 TLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDY 555
LI D+ + + + F D +IGG PC + S S G+E LFY Y
Sbjct: 53 KLIK-GDICGIPS-------DMFPKCDGIIGGPPCQSW--SEAGSLKGIEDPRGQLFYQY 102
Query: 556 FRIL 559
RIL
Sbjct: 103 IRIL 106
>gi|156936516|ref|YP_001440431.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
gi|156534770|gb|ABU79595.1| hypothetical protein ESA_pESA2p06562 [Cronobacter sakazakii ATCC
BAA-894]
Length = 415
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+G GG G+R S+ +E++ +++ N GT+++ D++
Sbjct: 16 LTSLDLFAGAGGLSE-----GLREAGFTSLYANEISPRYAQTY--AVNHPGTIVESRDIR 68
Query: 505 QLDANRIEQMIN-AFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++DA++I ++ G DL+ GG PC S + E + LF +Y R +
Sbjct: 69 EVDAHKIRNLLGLKRGELDLIAGGPPCQGF--SINAPKRSTEDSRNHLFREYLRFV 122
>gi|124005671|ref|ZP_01690510.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134]
gi|123988739|gb|EAY28345.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134]
Length = 352
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 17/115 (14%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLFSG+GG ++A R+G NV +V+ + + I+R +W T I + D++Q +
Sbjct: 5 SLFSGLGGFDLAAQRMG--WVNVFTVENNPFCQAILRHYWPDT------IHYEDIRQTNF 56
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ +G D++ GG PC SN R G+ E L+ + R + ++
Sbjct: 57 HPY------YGKVDIITGGFPCQPF--SNAGKRRGIN-DERYLWPEMLRAIQEIR 102
>gi|308229518|gb|ADO24171.1| M.AciI [Arthrobacter citreus]
Length = 703
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 117/301 (38%), Gaps = 57/301 (18%)
Query: 269 SRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSW 328
S+ + D+ + VD KY+ + + + ++ + I V P I + L L R+
Sbjct: 228 SQIISDILDDIVDKKYYFNSEKMKRFLSTINIDE----VNEPVSKIVKVLDLPRETHNDN 283
Query: 329 DTRSHLNCLQTCIASAKLTERIRKALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKL 388
+ + + + + K + DGE + K
Sbjct: 284 ERQRRVYSVNGISPTILARSDSTKIIVNKDGE----------------------LAIRKF 321
Query: 389 APLEPDEVEMLLGFPKNHT---RGGGISRTDRYKSLGNSFQ---VDTVAYH----LSVLK 438
P+E V+ GF K T + GIS T YK GN+ + +A H LS L+
Sbjct: 322 TPIENFRVQ---GFDKEFTDTLKHAGISDTQLYKQSGNAVSPPVITGIANHISEVLSDLE 378
Query: 439 EMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLI 498
E + + LFSGIGG +AL + G + S DI + R +++
Sbjct: 379 EKRMTKFSFIDLFSGIGGFRLALEKNGGTC--LFSSDIDKYAR---ETYFN--------- 424
Query: 499 DFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
+F ++ D +I F D++ G PC + + + R G E +LF+D RI
Sbjct: 425 NFGEMPSGDITKIASENIPFH--DILCAGFPCQPFSIAGK--RLGFEDTRGTLFFDVARI 480
Query: 559 L 559
+
Sbjct: 481 I 481
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 17/118 (14%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V+SLFSGIGG E+ L + + S +I + + + + N G D+ ++
Sbjct: 24 VVSLFSGIGGFELGLKYSSLSSHVIFSSEIDKFAQQSYLANFPNHNLVG------DITKI 77
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLA-GSNRHSRDGLEGKESSLFYDYFRILDLVK 563
D I D+++GG PC + NRH G E +LF++ RIL+ K
Sbjct: 78 DEQEIPDH-------DILMGGFPCQAFSIAGNRH---GFEDTRGTLFFNVARILNAKK 125
>gi|224543136|ref|ZP_03683675.1| hypothetical protein CATMIT_02336 [Catenibacterium mitsuokai DSM
15897]
gi|224523923|gb|EEF93028.1| modification methylase BanI [Catenibacterium mitsuokai DSM 15897]
Length = 430
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 19/119 (15%)
Query: 445 INVLSLFSGIGGA----EVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
I + LF+GIGG E+A GV+ + V + +I +++ Q + T+
Sbjct: 5 IKFVDLFAGIGGIRKGFELACSDRGVKTECVFTSEIKPYAIKVLK----QNHPNETIT-- 58
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ Q+DA +I FD ++GG PC + + + R G E +LF+D RI+
Sbjct: 59 GDITQVDATKIPD-------FDFLLGGFPCQAFSAAGK--RLGFEDTRGTLFFDVERIM 108
>gi|428778187|ref|YP_007169974.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
gi|428692466|gb|AFZ45760.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
Length = 452
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 20/119 (16%)
Query: 445 INVLSLFSGIGGA----EVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
+N + LF+GIGG E A H LG+ V S SEV + + ++ + N
Sbjct: 4 VNFIDLFAGIGGMRLGFESACHELGLTPNCVFS---SEVKKTAILTYEKNFNS------- 53
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
Q++ + E +NA FD ++ G PC A S R G +LF++ +IL
Sbjct: 54 ----QVEGDITEINLNAIPNFDFLLAGFPCQ--AFSTAGKRQGFLDTRGTLFFEIEKIL 106
>gi|402309650|ref|ZP_10828636.1| C-5 cytosine-specific DNA methylase domain protein, partial
[Eubacterium sp. AS15]
gi|402309691|ref|ZP_10828675.1| C-5 cytosine-specific DNA methylase domain protein, partial
[Eubacterium sp. AS15]
gi|400371250|gb|EJP24213.1| C-5 cytosine-specific DNA methylase domain protein, partial
[Eubacterium sp. AS15]
gi|400371333|gb|EJP24293.1| C-5 cytosine-specific DNA methylase domain protein, partial
[Eubacterium sp. AS15]
Length = 130
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 17/126 (13%)
Query: 437 LKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGT 496
++ +Y D +NVL LF GIG AL RL + K VD E+++N V+S+ N
Sbjct: 1 MEVVYIDEVNVLELFGGIGALRKALIRLKIPHK---VVDYVEIDKNCVKSYNALYNT--- 54
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLA--GSNRHSRDGLEGKESSLFYD 554
DF + + + + DL++ GSPC + + G + G G SSL ++
Sbjct: 55 --DFISKDIVKYHAPNERV------DLLMHGSPCQDFSRIGQKKGGVKG-TGTRSSLLFE 105
Query: 555 YFRILD 560
RI++
Sbjct: 106 TVRIIE 111
>gi|268607976|ref|ZP_06141707.1| cytosine-specific DNA-methyltransferase Sau96I [Ruminococcus
flavefaciens FD-1]
Length = 407
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 14/125 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVD---ISEVNRNIVRSWWEQTNQKGTLIDFA 501
+ + LF+G GG + + + G +V VD + RN R W N D A
Sbjct: 74 FSTIELFAGAGGLALGVEKAGFNTLGLVEVDKDASDTLRRN--RPEWRVIND-----DIA 126
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
+V LD + G DL+ GG+PC + + + + R GLE +LFY Y + L+
Sbjct: 127 NVSCLDLQEYFGLKQ--GELDLLSGGAPCQSFSYAGK--RLGLEDARGTLFYHYAKFLEQ 182
Query: 562 VKNMM 566
++ M
Sbjct: 183 LQPKM 187
>gi|124009862|ref|ZP_01694529.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134]
gi|123984098|gb|EAY24464.1| site-specific DNA-methyltransferase [Microscilla marina ATCC 23134]
Length = 353
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 17/115 (14%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLFSG+GG ++A R+G NV +V+ + + I+R +W + + D++Q+D
Sbjct: 5 SLFSGLGGFDLAAERMG--WVNVFTVENNPFCQTILRHYWPDSTH------YEDIRQIDF 56
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ +G DL+ GG PC + + + R G+ E L+ + R + ++
Sbjct: 57 SPY------YGQIDLLTGGFPCQPFSQAGK--RKGI-NDERYLWPEMLRAIREIR 102
>gi|306478566|gb|ADM89620.1| truncated DNA-methyltransferase 3a [Felis catus]
Length = 98
Score = 46.6 bits (109), Expect = 0.032, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 512 EQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
++ I +G FDLVIGGSPCN+L+ N +R GL LF++++R+L +
Sbjct: 13 QKHIQEWGPFDLVIGGSPCNDLSIVNP-ARKGLYEGTGRLFFEFYRLLQM 61
>gi|291521423|emb|CBK79716.1| DNA-methyltransferase (dcm) [Coprococcus catus GD/7]
Length = 521
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 8/119 (6%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LF+G GG G + V +E N+N +++ E + + DV+
Sbjct: 2 LKTIDLFAGAGGLSYGFESTG----EFLIVAAAENNKNARKTYIENHKGRNDIRLIPDVR 57
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
D + + F G D+VIGG PC + +NR ++ + +SL +YFR + ++
Sbjct: 58 DYD---FSALASEFDGIDVVIGGPPCQGFSNANRQ-KNHIISMNNSLVKEYFRAVKEIR 112
>gi|169786848|ref|YP_001700742.1| modification methylase (Cytosine-specific
methyltransferase)(HpaIIM-like) [Acinetobacter
baumannii]
gi|169150765|emb|CAP02959.1| modification methylase (Cytosine-specific
methyltransferase)(HpaIIM-like) [Acinetobacter
baumannii]
Length = 366
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 54/125 (43%), Gaps = 21/125 (16%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
+YP + LF+GIGG +A LG R +D++ QK +
Sbjct: 37 IYPSKFKFIDLFAGIGGFRLAFQNLGGRCVFSSEIDLAA--------------QKTYTAN 82
Query: 500 FADVQQLDANRIEQMINAF-GGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
F D D +E +A FD++ GG PC + + + R G E +LF+D +
Sbjct: 83 FGDTPYGDIT-LESTKDAIPDNFDILCGGFPCQAFSIAGK--RSGFEDTRGTLFFD---V 136
Query: 559 LDLVK 563
D++K
Sbjct: 137 ADIIK 141
>gi|67924690|ref|ZP_00518097.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
gi|67853467|gb|EAM48819.1| C-5 cytosine-specific DNA methylase [Crocosphaera watsonii WH 8501]
Length = 420
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 60/123 (48%), Gaps = 22/123 (17%)
Query: 445 INVLSLFSGIGGA----EVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
IN + LF+GIGG E+A +L + + ++S SE++ ++ ++F
Sbjct: 2 INFIDLFAGIGGMRLGLELACKKLNIETRCILS---SEIDYKACETYA---------LNF 49
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
++ Q D I+++ F+ ++ GSPC + + +H G +LF++ RILD
Sbjct: 50 DEIPQGDIKNIDKI----SSFNFILAGSPCQPFSYAGKHQ--GFGDTRGTLFFEVERILD 103
Query: 561 LVK 563
K
Sbjct: 104 KYK 106
>gi|417993543|ref|ZP_12633890.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei CRF28]
gi|410531479|gb|EKQ06205.1| C-5 cytosine-specific DNA methylase [Lactobacillus casei CRF28]
Length = 311
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 16/122 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVD--ISEVNRNIVRSWWEQTNQKGTLIDFAD 502
IN + LF+G GG L + G+ +K V +D IS++ +E + K +I+ +D
Sbjct: 3 INAIDLFAGCGGLTEGLEQAGITVKYAVELDPRISKI--------YEGNHHKTIMIN-SD 53
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHS-RDGLEGKESSLFYDYFRILDL 561
++++ + +M G D+V G PC NR++ R K + L +Y R + +
Sbjct: 54 IRRISDDDFRRM----GHVDIVAGCPPCQGFTQMNRNNKRRAYSDKRNILIEEYLRAVKI 109
Query: 562 VK 563
+K
Sbjct: 110 IK 111
>gi|145356149|ref|XP_001422300.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582541|gb|ABP00617.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 778
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V SLFSGIGG ++ L R G V+ V+ R ++R + G L+D DV
Sbjct: 3 LRVASLFSGIGGLDLGLERAG--HDVVLRVERDAHCRELLRRQYPD----GALMD--DVA 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLE-GKESSLFYDYFRIL 559
+ M G DL+ G PCN+ + N +R GLE G+++ L FR+L
Sbjct: 55 AV-------MPRDLDGVDLLAAGFPCNDCSFEN-AARPGLEHGRDTRLVRHVFRLL 102
>gi|428777731|ref|YP_007169518.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
gi|428692010|gb|AFZ45304.1| DNA-cytosine methyltransferase [Halothece sp. PCC 7418]
Length = 468
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 19/144 (13%)
Query: 420 SLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV 479
S+ N Q+ HL L + + LF+GIGG +AL +LG + + SE+
Sbjct: 3 SVINCEQLKLFNPHL--LTSFCQNQFTFVDLFAGIGGFRIALEKLGGK-----CLGYSEI 55
Query: 480 NRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSN 537
+R R +++ I++ + ++D ++Q+ DL++GG PC ++AG +
Sbjct: 56 DRE-AREVYQK-----NFINYVNANEIDLGDVKQINYLPWHIDLIVGGVPCQPWSIAGKS 109
Query: 538 RHSRDGLEGKESSLFYDYFRILDL 561
G + L++D RI++L
Sbjct: 110 ----GGFDDPRGRLWFDVIRIVEL 129
>gi|224003607|ref|XP_002291475.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220973251|gb|EED91582.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 733
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 62/139 (44%), Gaps = 37/139 (26%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQ--------------- 490
NVLS+ SGIG A +AL +LGV MK VV V V++++ RS E+
Sbjct: 317 NVLSINSGIGSACLALKQLGVSMKKVVHVVDDRVSQHVFRSNHEKGYFGGKDNDDGIEHI 376
Query: 491 TNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS 550
TN TL D A Q+ ++ FG D+V+ P +E+
Sbjct: 377 TNLYNTLGDLAVDQK-------GLVEKFGPIDVVVCSCPMKT-------------EEETE 416
Query: 551 LFYDYFRILDLVKNMMQRN 569
F D F L+LVK + + N
Sbjct: 417 QFIDSF--LELVKQVERYN 433
>gi|317497297|ref|ZP_07955620.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
gi|316895366|gb|EFV17525.1| DNA-cytosine methyltransferase [Lachnospiraceae bacterium
5_1_63FAA]
Length = 385
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 18/112 (16%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG A R G N+ S W++ QK I+F ++ D
Sbjct: 75 IDLFAGIGGIRQAFQRQG--------------GYNVYSSEWDKFAQKTYRINFGEIPDGD 120
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ + N D+++ G PC + + H G E +LF+D RI+
Sbjct: 121 ITLVSE--NDIPDHDILLAGFPCQPFSQAGLHK--GFEDARGTLFFDVARII 168
>gi|315657354|ref|ZP_07910236.1| modification methylase NgoPII [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315491826|gb|EFU81435.1| modification methylase NgoPII [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 355
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+NV+SLFSG GG ++ + G + +E + I ++ + N T + D++
Sbjct: 1 MNVISLFSGCGGLDLGFEQAGFNIPVA-----NEFDPTIYETF--KANHPHTHLIEGDIR 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
+ I ++ G D +IGG PC + AG+ R G+E LFYDY RIL
Sbjct: 54 GVTIEDIAPFVD--GEVDGIIGGPPCQSWSEAGALR----GIEDARGQLFYDYIRIL 104
>gi|304390097|ref|ZP_07372051.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304326579|gb|EFL93823.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 355
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+NV+SLFSG GG ++ + G + +E + I ++ + N T + D++
Sbjct: 1 MNVISLFSGCGGLDLGFEQAGFNIPVA-----NEFDPTIYETF--KANHPHTHLIEGDIR 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
+ I ++ G D +IGG PC + AG+ R G+E LFYDY RIL
Sbjct: 54 GVTIEDIAPFVD--GEVDGIIGGPPCQSWSEAGALR----GIEDARGQLFYDYIRIL 104
>gi|298346143|ref|YP_003718830.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC
43063]
gi|298236204|gb|ADI67336.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii ATCC
43063]
Length = 355
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+NV+SLFSG GG ++ + G + +E + I ++ + N T + D++
Sbjct: 1 MNVISLFSGCGGLDLGFEQAGFNIPVA-----NEFDPTIYETF--KANHPHTHLIEGDIR 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
+ I ++ G D +IGG PC + AG+ R G+E LFYDY RIL
Sbjct: 54 GVTIEDIAPFVD--GEVDGIIGGPPCQSWSEAGALR----GIEDARGQLFYDYIRIL 104
>gi|389574574|ref|ZP_10164634.1| hypothetical protein BAME_32030 [Bacillus sp. M 2-6]
gi|388425696|gb|EIL83521.1| hypothetical protein BAME_32030 [Bacillus sp. M 2-6]
Length = 580
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 8/118 (6%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V+ LF+G GG + G R + V+V+I+E R + N + +I D+ +L
Sbjct: 6 VMDLFAGAGGLSNGFEQTG-RFEVKVAVEINENARKTFK-----INHRNDVILHEDITKL 59
Query: 507 D-ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ + I F D+VIGG PC + +NR ++ L ++L +Y R ++ ++
Sbjct: 60 QYTDKNGEKIGEFRDIDVVIGGPPCQGFSNANRQ-QNTLISSNNNLVKEYLRAIEEIR 116
>gi|402311123|ref|ZP_10830074.1| putative modification methylase HhaI [Eubacterium sp. AS15]
gi|400365859|gb|EJP18903.1| putative modification methylase HhaI [Eubacterium sp. AS15]
Length = 314
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 59/123 (47%), Gaps = 17/123 (13%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
+Y D +NVL LF GIG AL RL + K VD E+++N V+S+ N D
Sbjct: 4 VYIDEVNVLELFGGIGALRKALIRLKIPHK---VVDYVEIDKNCVKSYNALYNT-----D 55
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLA--GSNRHSRDGLEGKESSLFYDYFR 557
F + + + + DL++ GSPC + + G + G G SSL ++ R
Sbjct: 56 FISKDIVKYHAPNERV------DLLMHGSPCQDFSRIGQKKGGVKG-TGTRSSLLFETVR 108
Query: 558 ILD 560
I++
Sbjct: 109 IIE 111
>gi|422937084|ref|YP_007007349.1| putative DNA-methyltransferase [Enterobacteria phage vB_KleM-RaK2]
gi|375281274|gb|AFA44467.1| putative DNA-methyltransferase [Enterobacteria phage vB_KleM-RaK2]
Length = 297
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 19/133 (14%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
M+ I VLSLF+G+ +AL G+ ++ S SE+++ + Q N
Sbjct: 1 MFMKPITVLSLFNGMSVGYMALKNAGIPVQKYYS---SEIDKFAIAE--SQAN------- 48
Query: 500 FADVQQL-DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRH------SRDGLEGKESSLF 552
+ D+ QL D + E +G DL+IGGSPC +++ + + +G G S LF
Sbjct: 49 YPDIIQLGDITKWEDWDIDWGSIDLLIGGSPCTDVSFAGKQEGLVKPDENGDGGTRSGLF 108
Query: 553 YDYFRILDLVKNM 565
Y I + +K++
Sbjct: 109 YIMIDIFNHIKSI 121
>gi|294673665|ref|YP_003574281.1| prophage PRU01 DNA methylase, C-5 cytosine-specific family
[Prevotella ruminicola 23]
gi|294471747|gb|ADE81136.1| prophage PRU01, DNA methylase, C-5 cytosine-specific family
[Prevotella ruminicola 23]
Length = 330
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 23/123 (18%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWE--QTNQKGTLIDFAD 502
+ V+SLFSG GG ++ R G + D S WE + N T + D
Sbjct: 1 MKVISLFSGCGGLDLGFERAGFEVPVANEFD---------PSIWETFEANHPKTKLIRGD 51
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRILD 560
++ + + + + D +IGG PC + AGS R G+E LF+DY RIL
Sbjct: 52 IRNIKESDFPKDV------DGIIGGPPCQSWSEAGSLR----GIEDARGQLFFDYIRILQ 101
Query: 561 LVK 563
VK
Sbjct: 102 EVK 104
>gi|47212795|emb|CAF96170.1| unnamed protein product [Tetraodon nigroviridis]
Length = 270
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 14/107 (13%)
Query: 459 VALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMIN 516
+ L LG ++ V+ ++ E ++ +VR +G + DV+ + I +
Sbjct: 6 LVLRDLGFKVDLYVASEVCEDSISVGVVR-------HEGKIKYVHDVRDITKKNIME--- 55
Query: 517 AFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+G FDLVIGGSPCN+L+ N +R GL LF++++R+L K
Sbjct: 56 -WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLLSEAK 100
>gi|282880843|ref|ZP_06289537.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
gi|281305284|gb|EFA97350.1| DNA (cytosine-5-)-methyltransferase [Prevotella timonensis CRIS
5C-B1]
Length = 374
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 25/133 (18%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLI------ 498
+NV+ +FSG+GG V + G NVV + E++ I +S+ + N T++
Sbjct: 1 MNVVDIFSGVGGLSVGFEKAGF---NVVLAN--EIDEQIAQSY--KRNHTHTIMVNEDIR 53
Query: 499 DFAD---------VQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSN-RHSRDGLEG 546
F D ++L++N E++ ++VIGG PC ++AGS R + + ++
Sbjct: 54 SFVDHFDDSISKATERLNSNCKEKLYQELNDINVVIGGPPCQGFSMAGSRIRKTSEFIDD 113
Query: 547 KESSLFYDYFRIL 559
+ LF YF+I+
Sbjct: 114 SRNFLFRYYFKII 126
>gi|406659161|ref|ZP_11067299.1| modification methylase SsoII [Streptococcus iniae 9117]
gi|405577270|gb|EKB51418.1| modification methylase SsoII [Streptococcus iniae 9117]
Length = 406
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 13/118 (11%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
N+ + FSG+GG E+ + G V +E ++N +++ N T +D D+
Sbjct: 14 NIAAFFSGVGGIELGFEQTG----EFRVVYANEFDKNARKTY--ALNYPDTFLDSRDIHA 67
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+D + I DL++GG PC A S R G E + LF++ R++ + K
Sbjct: 68 VDPDEIPSET-----VDLIVGGFPCQ--AFSIAGYRKGFEDERGDLFFELLRMIKVKK 118
>gi|119490455|ref|ZP_01622916.1| cytosine specific DNA methyltransferase (DDEM) [Lyngbya sp. PCC
8106]
gi|119453926|gb|EAW35081.1| cytosine specific DNA methyltransferase (DDEM) [Lyngbya sp. PCC
8106]
Length = 399
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
G+ L LF G+GG L + +++ + +VD + N+ +E K L++
Sbjct: 2 GLKALDLFCGMGGLSWGL-KSTRKIEPIWAVDNCQTALNL----YELNLPKTNLLNLDLS 56
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLA 534
+QLD + + IN GG DL++GGSPC
Sbjct: 57 RQLDVTSLIEKINFNGGIDLMVGGSPCQGFT 87
>gi|119386086|ref|YP_917141.1| C-5 cytosine-specific DNA methylase [Paracoccus denitrificans
PD1222]
gi|119376681|gb|ABL71445.1| C-5 cytosine-specific DNA methylase [Paracoccus denitrificans
PD1222]
Length = 502
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 12/116 (10%)
Query: 445 INVLSLFSGI-GGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
++VL LFSG GG + LHR G + + +I E R + + +AD+
Sbjct: 12 LHVLDLFSGAAGGWSLGLHRAG--FMTIAACEIVEWRRILYSENFPHVRL------YADI 63
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ L A R+ + D+V+G PC +++ +N + G+EG+ S L+ + R++
Sbjct: 64 RDLTATRLVSDLGCL--PDIVVGSPPCQDISSANTKGK-GIEGERSGLYLEAVRLV 116
>gi|452204534|ref|YP_007484663.1| putative DNA-cytosine methyltransferase [Dehalococcoides mccartyi
BTF08]
gi|452111590|gb|AGG07321.1| putative DNA-cytosine methyltransferase [Dehalococcoides mccartyi
BTF08]
Length = 748
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 438 KEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTL 497
K M G+ + SLF G GG LG + + V SEV +R T + +
Sbjct: 5 KSMSESGLTLGSLFDGSGG-----FPLGGLLSGIKPVWASEVEPFPIRV---TTKRLPFM 56
Query: 498 IDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
+ DV +++ IE + D++ GSPC +++ + + R GL+G S+LFY+ R
Sbjct: 57 KHYGDVSKMNGGEIEPV-------DIITFGSPCQDMSVAGK--RAGLDGSRSNLFYEAVR 107
Query: 558 IL 559
I+
Sbjct: 108 IV 109
>gi|254228592|ref|ZP_04922017.1| Site-specific DNA methylase [Vibrio sp. Ex25]
gi|262392607|ref|YP_003284461.1| DNA-cytosine methyltransferase [Vibrio sp. Ex25]
gi|151938974|gb|EDN57807.1| Site-specific DNA methylase [Vibrio sp. Ex25]
gi|262336201|gb|ACY49996.1| DNA-cytosine methyltransferase [Vibrio sp. Ex25]
Length = 427
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 16/116 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N S F+GIGG ++A G + +++ +++++ W + G D+
Sbjct: 8 LNFNSFFAGIGGFDLAFENQG--FEPSFQCELNAFCQSVLKKHWGRVPLHG------DIS 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLA-GSNRHSRDGLEGKESSLFYDYFRIL 559
LDA+ I + GGF PC +L+ R GL G S LFY +F ++
Sbjct: 60 NLDASEIPKATVWCGGF-------PCQDLSVARGSKGRQGLRGSNSGLFYPFFDLI 108
>gi|402311117|ref|ZP_10830069.1| DNA (cytosine-5-)-methyltransferase [Eubacterium sp. AS15]
gi|400366058|gb|EJP19099.1| DNA (cytosine-5-)-methyltransferase [Eubacterium sp. AS15]
Length = 317
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 25/127 (19%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
+Y D +NVL LF GIG AL RL + K VD E+++N V+S+ N D
Sbjct: 4 VYIDEVNVLELFGGIGALRKALIRLKIPHK---VVDYVEIDKNCVKSYNALYNT-----D 55
Query: 500 F--ADVQQLDA--NRIEQMINAFGGFDLVIGGSPCNNLA--GSNRHSRDGLEGKESSLFY 553
F D+ + A R+ DL++ GSPC + + G + G G SSL +
Sbjct: 56 FISKDIVKYHAPNERV----------DLLMHGSPCQDFSRIGQKKGGVKG-TGTRSSLLF 104
Query: 554 DYFRILD 560
+ RI++
Sbjct: 105 ETVRIIE 111
>gi|327403407|ref|YP_004344245.1| DNA-cytosine methyltransferase [Fluviicola taffensis DSM 16823]
gi|327318915|gb|AEA43407.1| DNA-cytosine methyltransferase [Fluviicola taffensis DSM 16823]
Length = 422
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 16/112 (14%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +AL LG + + S W++ +K +F ++ D
Sbjct: 100 IDLFAGIGGFRLALQNLG--------------GKCVFTSEWDEQAKKTYQANFGEIPFGD 145
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ GFD++ GG PC + + + R G E +LF+D I+
Sbjct: 146 ITKDSTKAFIPDGFDVLCGGFPCQAFSIAGK--RGGFEDTRGTLFFDVAEII 195
>gi|149373126|ref|ZP_01892014.1| DcmB [unidentified eubacterium SCB49]
gi|149354274|gb|EDM42843.1| DcmB [unidentified eubacterium SCB49]
Length = 349
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 60/118 (50%), Gaps = 20/118 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++S F+G GG ++ + G NV+ + E ++ I ++ + N T++D +
Sbjct: 1 MKIVSFFAGAGGLDLGFQQAGF---NVIWAN--EYDKEIWETY--EKNHPNTILDKRSIV 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRILD 560
+ A+ + + D +IGG PC + AG+ R G++ K LFYD+ RIL+
Sbjct: 54 NIPADEVPEC-------DGIIGGPPCQSWSEAGAAR----GIKDKRGQLFYDFIRILE 100
>gi|428780596|ref|YP_007172382.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
gi|428694875|gb|AFZ51025.1| DNA-methyltransferase Dcm [Dactylococcopsis salina PCC 8305]
Length = 351
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG + LG R V +E +R I ++ Q N + T++D D++
Sbjct: 1 MQIVSLFSGCGGLD-----LGFRQAGFQVVWANEYDRTIWSTY--QRNHQNTILDQRDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + I + +IGG PC + + + G+ LF +Y R+L
Sbjct: 54 EITSQDIPDCVG-------IIGGPPCQSWSEGGKQR--GINDDRGRLFLEYIRVL 99
>gi|283783021|ref|YP_003373775.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
gi|283441534|gb|ADB14000.1| DNA (cytosine-5-)-methyltransferase [Gardnerella vaginalis 409-05]
Length = 357
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 19/122 (15%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
V+ LFSG+GG + G + + +E + +I ++ + N K T + D+
Sbjct: 4 TVIDLFSGVGGLSLGFEEEGFSV-----LLANEYDESIANAYMK--NHKTTKMVVGDITS 56
Query: 506 LDANRIEQMINAFGGF----DLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
LD + + FG + D++IGG PC S + R + K + LF Y ++++L
Sbjct: 57 LDLDAV------FGTYKNKIDVIIGGPPCQGF--SQKGQRKTIYDKRNFLFEYYVKVVEL 108
Query: 562 VK 563
VK
Sbjct: 109 VK 110
>gi|420417788|ref|ZP_14916883.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
gi|393030969|gb|EJB32042.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4044]
Length = 362
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 43/149 (28%)
Query: 450 LFSGIGGAEVALHRLGVRMKNVVSVDISEVN---------------------RNIVRSWW 488
+FSGIG E AL RL + + + + D ++ +N + +
Sbjct: 1 MFSGIGAFEWALKRLDLEHEILFACDNGNIDLKLDYDLELNKIKSLSSIKEKKNYTNNLY 60
Query: 489 EQTNQKGTLID--------------FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLA 534
+Q ++K + F D++ D + D+++GGSPC +
Sbjct: 61 KQHSRKTNFVKQSYLANYTIQNDCFFQDIKLFDGTDFTDKV------DILVGGSPCQSF- 113
Query: 535 GSNRHSRDGLEGKESSLFYDYFRILDLVK 563
S+ ++ GLE +LFYDY R+L+ +K
Sbjct: 114 -SSIGNKLGLEDTRGTLFYDYIRVLNEIK 141
>gi|296126993|ref|YP_003634245.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
gi|296018809|gb|ADG72046.1| DNA-cytosine methyltransferase [Brachyspira murdochii DSM 12563]
Length = 324
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 20/113 (17%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +AL LG + + + W++ ++ +F D+ D
Sbjct: 15 IDLFAGIGGFRIALESLGAKC--------------VYSNEWDKFAKESYYKNFGDIPDDD 60
Query: 508 ANRI-EQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+I E++I A D++ G PC + S + G E K +LF+D RIL
Sbjct: 61 ITKIDEKLIPA---HDILCAGFPCQAFSISGKQK--GFEDKRGNLFFDIARIL 108
>gi|425438535|ref|ZP_18818879.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9717]
gi|389718092|emb|CCH97890.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9717]
Length = 464
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 24/147 (16%)
Query: 418 YKSLGNSFQVDT---VAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSV 474
Y L + +V T + HL + Y + LF+GIGG +AL +LG R +
Sbjct: 6 YLPLKTTVKVSTQTQLPLHLVITHPQY----RFIDLFAGIGGFRIALEKLGGR-----CL 56
Query: 475 DISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--N 532
SE+++ ++ + + I + + ++ + ++ N DL++GG PC +
Sbjct: 57 GYSEIDKQAIQVYQQ------NFISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWS 110
Query: 533 LAGSNRHSRDGLEGKESSLFYDYFRIL 559
+AG R G E L++D +++
Sbjct: 111 VAGCLR----GFEDPRGKLWFDVIKLV 133
>gi|313675860|ref|YP_004053856.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
gi|312942558|gb|ADR21748.1| DNA-cytosine methyltransferase [Marivirga tractuosa DSM 4126]
Length = 412
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 21/120 (17%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQT---NQKGTLIDFADV 503
VL LF+G GG V L + G++ + + +D W QT N+ + D+
Sbjct: 76 VLELFAGAGGLAVGLEKAGLKCQALNEID----------KWACQTLRNNRPHWNVLEGDI 125
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ D +E I D+V GG PC + + + + GL+ +LFY++ R++ VK
Sbjct: 126 KDFDFKELENQI------DVVTGGFPCQAFSYAGK--KLGLKDARGTLFYEFARVVTEVK 177
>gi|425470152|ref|ZP_18849022.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9701]
gi|389884300|emb|CCI35387.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9701]
Length = 463
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 24/147 (16%)
Query: 418 YKSLGNSFQVDT---VAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSV 474
Y L + +V T + HL + Y + LF+GIGG +AL +LG R +
Sbjct: 5 YLPLKTTVKVSTQPQLPLHLVITHPQY----RFVDLFAGIGGFRIALEKLGGR-----CL 55
Query: 475 DISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--N 532
SE+++ ++ + + I + + ++ + ++ N DL++GG PC +
Sbjct: 56 GYSEIDKQAIQVYQQ------NFISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWS 109
Query: 533 LAGSNRHSRDGLEGKESSLFYDYFRIL 559
+AG R G E L++D +++
Sbjct: 110 VAGCLR----GFEDPRGKLWFDVIKLV 132
>gi|365119910|ref|ZP_09337763.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
gi|363648114|gb|EHL87299.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
Length = 363
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 13/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I ++SLFSG GG ++ ++G K + + D R + G +I D++
Sbjct: 6 IGIVSLFSGCGGLDLGFEQVG-DYKTLWANDFKHEACETFRKHF------GDIIVEGDIE 58
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
Q+D + + N DLV+GG PC + S R GL G+ +L+ + R +D K
Sbjct: 59 QIDPYTDKTIPNC----DLVLGGFPCQDF--SIIWKRPGLNGERGNLYKSFLRFVDAKK 111
>gi|357638955|ref|ZP_09136828.1| DNA (cytosine-5-)-methyltransferase [Streptococcus urinalis
2285-97]
gi|418416517|ref|ZP_12989716.1| DNA (cytosine-5-)-methyltransferase [Streptococcus urinalis
FB127-CNA-2]
gi|357587409|gb|EHJ56817.1| DNA (cytosine-5-)-methyltransferase [Streptococcus urinalis
2285-97]
gi|410874335|gb|EKS22266.1| DNA (cytosine-5-)-methyltransferase [Streptococcus urinalis
FB127-CNA-2]
Length = 333
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ +S+ KG I+F D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGLTREGHECIGFCEIDKFARKSYKAIYETKGE-IEFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
Q+ Q+ G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 QVTDQDFRQLR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|75812610|ref|YP_320229.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
gi|75705366|gb|ABA25040.1| C-5 cytosine-specific DNA methylase [Anabaena variabilis ATCC
29413]
Length = 253
Score = 46.2 bits (108), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 59/122 (48%), Gaps = 27/122 (22%)
Query: 446 NVLSLFSGIGG------AEVAL-HRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLI 498
+VLSLFSGIGG A L H+ VR V+IS +++++R QT
Sbjct: 3 SVLSLFSGIGGLCHHGIAAAGLSHKFQVRQ----FVEISPYSQSVLRYEQPQTPIH---- 54
Query: 499 DFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
+D+ NR G FD++ GG PC SN +R GL S+L+ + FRI
Sbjct: 55 --SDITTYHCNR--------GQFDILCGGFPCAGT--SNSGNRQGLSDPRSALWAEQFRI 102
Query: 559 LD 560
++
Sbjct: 103 IE 104
>gi|390440973|ref|ZP_10229162.1| Modification methylase HgiBI [Microcystis sp. T1-4]
gi|389835743|emb|CCI33288.1| Modification methylase HgiBI [Microcystis sp. T1-4]
Length = 462
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 24/147 (16%)
Query: 418 YKSLGNSFQVDT---VAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSV 474
Y L + +V T + HL + Y + LF+GIGG +AL +LG R +
Sbjct: 5 YLPLKTTVKVSTQPQLPLHLVITHPQY----RFVDLFAGIGGFRIALEKLGGR-----CL 55
Query: 475 DISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--N 532
SE+++ ++ + + I + + ++ + ++ N DL++GG PC +
Sbjct: 56 GYSEIDKQAIQVYQQ------NFISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWS 109
Query: 533 LAGSNRHSRDGLEGKESSLFYDYFRIL 559
+AG R G E L++D +++
Sbjct: 110 VAGCLR----GFEDPRGKLWFDVIKLV 132
>gi|339302136|ref|ZP_08651204.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
agalactiae ATCC 13813]
gi|319744417|gb|EFV96775.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
agalactiae ATCC 13813]
Length = 450
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ +S+ KG I+F D++
Sbjct: 4 MKFLDLFAGIGG-----FRLGLTRQGHECIGFCEIDKFARKSYKAIYETKGE-IEFHDIR 57
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
Q+ Q+ G D++ GG PC + + R R G E + +LF++ R
Sbjct: 58 QVTDEDFRQLR---GQVDIICGGFPCQAFSLAGR--RLGFEDTKGTLFFEIAR 105
>gi|254413040|ref|ZP_05026812.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
gi|196180204|gb|EDX75196.1| C-5 cytosine-specific DNA methylase superfamily [Coleofasciculus
chthonoplastes PCC 7420]
Length = 355
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 60/113 (53%), Gaps = 16/113 (14%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
++SLFSG GG ++ + G NVV + E +++I +++ Q+N T +D D++ +
Sbjct: 11 IVSLFSGCGGLDLGFRQAGF---NVVWAN--EYDKDIWQTY--QSNHPNTFLDRRDIRHV 63
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ I + FG ++GG PC + + + ++ G+ LF +Y RIL
Sbjct: 64 PSADIP---DCFG----IVGGPPCQSWSEAG--TQKGINDDRGRLFLEYIRIL 107
>gi|425443855|ref|ZP_18823918.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9443]
gi|389733504|emb|CCI02731.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9443]
Length = 463
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 67/147 (45%), Gaps = 24/147 (16%)
Query: 418 YKSLGNSFQVDT---VAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSV 474
Y L + +V T + HL + Y + LF+GIGG +AL +LG R +
Sbjct: 5 YLPLKTTVKVSTQTQLPLHLVITHPQY----RFVDLFAGIGGFRIALEKLGGR-----CL 55
Query: 475 DISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--N 532
SE+++ ++ + + I + + ++ + ++ N DL++GG PC +
Sbjct: 56 GYSEIDKQAIQVYQQ------NFISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWS 109
Query: 533 LAGSNRHSRDGLEGKESSLFYDYFRIL 559
+AG R G E L++D +++
Sbjct: 110 VAGCLR----GFEDPRGKLWFDVIKLV 132
>gi|408491073|ref|YP_006867442.1| DNA-cytosine methyltransferase Dcm [Psychroflexus torquis ATCC
700755]
gi|408468348|gb|AFU68692.1| DNA-cytosine methyltransferase Dcm [Psychroflexus torquis ATCC
700755]
Length = 412
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
+VL LF+G GG + L + G++ ++E+++ ++ +TN+ I D++
Sbjct: 77 SVLELFAGAGGLAIGLEQSGIK-----CTALNEIDKWACQTL--RTNRPSWNILEGDIKN 129
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
D + E + D+V GG PC + + + + GL+ +LFY++ R++ VK
Sbjct: 130 FDFRQYENKV------DIVTGGFPCQAFSYAGK--KLGLKDARGTLFYEFARVIQEVK 179
>gi|390434475|ref|ZP_10223013.1| DNA-cytosine methyltransferase [Pantoea agglomerans IG1]
Length = 419
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 8/119 (6%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVD--ISEV-NRNIVRSWWEQTNQKGTLIDFA 501
+ + LF+G GG +A HR G+ ++ + +D SE +N+V ++ QT I+
Sbjct: 17 LKAIDLFAGAGGFSLAAHRTGIDVQVAIELDKLASETYYKNLVENYEAQTQVFCQDINAV 76
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
D+ L Q I A G DL++GG PC + S+R + G + + L YF ++
Sbjct: 77 DIDSLMKF---QGIKA-GELDLILGGPPCQGFS-SHRINDAGKDDPRNDLLLRYFDFVE 130
>gi|416892728|ref|ZP_11924052.1| methylase [Aggregatibacter aphrophilus ATCC 33389]
gi|347814426|gb|EGY31075.1| methylase [Aggregatibacter aphrophilus ATCC 33389]
Length = 360
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 16/125 (12%)
Query: 435 SVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQK 494
++ K + + LF+GIGG +A+ +LG + + S W++ QK
Sbjct: 24 TIFKSNSQEKFTFIDLFAGIGGFRIAMQKLG--------------GKCVFSSEWDEQAQK 69
Query: 495 GTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYD 554
+F D+ D E FD++ G PC + + + R G E +LF+D
Sbjct: 70 TYEANFGDLPYGDITLEETKSFIPEKFDILCAGFPCQAFSIAGK--RGGFEDTRGTLFFD 127
Query: 555 YFRIL 559
I+
Sbjct: 128 VAEII 132
>gi|422758983|ref|ZP_16812745.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
gi|322411818|gb|EFY02726.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 451
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 21/135 (15%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ ++S+ +G I+F D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGLTNQGHECIGFCEIDKFAMKSYKAIYETEGE-IEFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDY--------- 555
Q+ +Q+ G D++ GG PC + + R R G E +LF++
Sbjct: 55 QVTDQDFKQLR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIARAAKQIQP 109
Query: 556 -FRILDLVKNMMQRN 569
F L+ VK ++ N
Sbjct: 110 RFLFLENVKGLLSHN 124
>gi|227828127|ref|YP_002829907.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.14.25]
gi|227830834|ref|YP_002832614.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.S.2.15]
gi|229581602|ref|YP_002840001.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.N.15.51]
gi|238620327|ref|YP_002915153.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.4]
gi|284998349|ref|YP_003420117.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.D.8.5]
gi|227457282|gb|ACP35969.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.S.2.15]
gi|227459923|gb|ACP38609.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.14.25]
gi|228012318|gb|ACP48079.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.N.15.51]
gi|238381397|gb|ACR42485.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.4]
gi|284446245|gb|ADB87747.1| DNA-cytosine methyltransferase [Sulfolobus islandicus L.D.8.5]
Length = 325
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I V+ LFSG GG + +LG+ K +++DI N R++ N T++ D++
Sbjct: 4 IKVIDLFSGAGGFSLGFKKLGIEPK--LAIDI---NHAAARTY--SLNFPNTIVIEDDIR 56
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSN-RHSRDGLE----GKESSLFYDYFRIL 559
Q+ I + N D++IGG PC +N +D L+ + SL ++ RI+
Sbjct: 57 QISGKEI--LKNVGDEIDVIIGGPPCEGYTAANPLRMQDPLDRLYLDQRGSLTLEFIRIV 114
Query: 560 DLVK 563
D +K
Sbjct: 115 DELK 118
>gi|390942511|ref|YP_006406272.1| DNA-methyltransferase Dcm [Belliella baltica DSM 15883]
gi|390415939|gb|AFL83517.1| DNA-methyltransferase Dcm [Belliella baltica DSM 15883]
Length = 425
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 16/115 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ LF+GIGG +A LG + + S W++ +K +F ++
Sbjct: 100 FKFIDLFAGIGGFRLAFQSLG--------------GKCVFTSEWDEQAKKTYYANFGEIP 145
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D + E GFD++ G PC + + + R G E +LFYD I+
Sbjct: 146 FGDITKPETKNFIPDGFDVLCAGFPCQAFSIAGK--RGGFEDTRGTLFYDVAEII 198
>gi|205360554|ref|ZP_02684441.2| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|417370248|ref|ZP_12141176.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
gi|205348823|gb|EDZ35454.1| modification methylase DdeI [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|353582256|gb|EHC42962.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Hvittingfoss str. A4-620]
Length = 394
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 19/127 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQT---NQKGTLIDFA 501
+ VL F+G GG + H G + + VD SW +T N +L+
Sbjct: 4 VKVLDTFAGAGGFSLGFHMAGAEIIGAIEVD----------SWATETFKFNHPESLVIKK 53
Query: 502 DVQQLDANRIEQMINAFGGF--DLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ Q E+++ F D+++GG PC + +N+ + D + + +SLF ++ RI
Sbjct: 54 DISQFSD---EEILETFKNNKPDIILGGPPCQGFSIANKKNGDHKDPR-NSLFEEFLRIG 109
Query: 560 DLVKNMM 566
++ M+
Sbjct: 110 RILSPMV 116
>gi|146309050|ref|YP_001189515.1| DNA-cytosine methyltransferase [Pseudomonas mendocina ymp]
gi|145577251|gb|ABP86783.1| DNA-cytosine methyltransferase [Pseudomonas mendocina ymp]
Length = 365
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ +L LFSG GG + + G + V +D I+ S + ++ ADV
Sbjct: 2 LTLLDLFSGCGGLTLGAKQAGFTTELAVDID------PILSSSFGLNFPSVPFLN-ADVT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L ++R++ ++ + G D VIGG PC +G R D SL ++FRI+ VK
Sbjct: 55 TLTSDRLKALLPS--GVDGVIGGPPCQAFSGMGRGLAD---DPRRSLLGEFFRIVATVK 108
>gi|390993340|ref|ZP_10263514.1| DNA-cytosine methyltransferase family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
gi|372551927|emb|CCF70489.1| DNA-cytosine methyltransferase family protein [Xanthomonas
axonopodis pv. punicae str. LMG 859]
Length = 404
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+G GG G+R S+ +E++ +++ N T +D D++
Sbjct: 5 LTSLDLFAGAGGLSE-----GLREAGFTSLYANEISPRYAQTY--AANHPATQVDSRDIR 57
Query: 505 QLDANRIEQMIN-AFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++DA ++ +++ G DLV GG PC S + E + LF +Y R +
Sbjct: 58 KVDARKVRKLLGLKRGELDLVAGGPPCQGF--SINAPKRSTEDSRNHLFREYLRFV 111
>gi|385773806|ref|YP_005646373.1| DNA-cytosine methyltransferase [Sulfolobus islandicus HVE10/4]
gi|385776441|ref|YP_005649009.1| DNA-cytosine methyltransferase [Sulfolobus islandicus REY15A]
gi|323475189|gb|ADX85795.1| DNA-cytosine methyltransferase [Sulfolobus islandicus REY15A]
gi|323477921|gb|ADX83159.1| DNA-cytosine methyltransferase [Sulfolobus islandicus HVE10/4]
Length = 325
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I V+ LFSG GG + +LG+ K +++DI N R++ N T++ D++
Sbjct: 4 IKVIDLFSGAGGFSLGFKKLGIEPK--LAIDI---NHAAARTY--SLNFPNTIVIEDDIR 56
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSN-RHSRDGLE----GKESSLFYDYFRIL 559
Q+ I + N D++IGG PC +N +D L+ + SL ++ RI+
Sbjct: 57 QISGKEI--LKNVGDEIDVIIGGPPCEGYTAANPLRMQDPLDRLYLDQRGSLTLEFIRIV 114
Query: 560 DLVK 563
D +K
Sbjct: 115 DELK 118
>gi|424842366|ref|ZP_18266991.1| DNA-methyltransferase Dcm [Saprospira grandis DSM 2844]
gi|395320564|gb|EJF53485.1| DNA-methyltransferase Dcm [Saprospira grandis DSM 2844]
Length = 399
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 23/123 (18%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ LF+GIGG +A +LG + + S W++ +QK +F ++
Sbjct: 85 FKFIDLFAGIGGFRLAFQQLG--------------GKCVFTSEWDRFSQKTYEANFGEIP 130
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGL-----EGKESSLFYDYFR 557
D +IE+ + D+++GG PC +LAG ++ + G + + +LF+D R
Sbjct: 131 FGDITKIEE--SQIPQHDILLGGFPCQPFSLAGVSKKNSLGRKHGFKDETQGTLFFDIVR 188
Query: 558 ILD 560
IL+
Sbjct: 189 ILE 191
>gi|417787172|ref|ZP_12434855.1| DNA-cytosine methyltransferase [Lactobacillus salivarius NIAS840]
gi|334307349|gb|EGL98335.1| DNA-cytosine methyltransferase [Lactobacillus salivarius NIAS840]
Length = 366
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 12/118 (10%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V+ LF+G GG + G + V D S I ++ + N GT + D++ +
Sbjct: 4 VIDLFAGAGGFSTGFRKAGFAITKAVEFDAS-----IAETYIK--NHPGTKMIVDDIKNV 56
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGK-ESSLFYDYFRILDLVK 563
D A +++IGG PC + + +RDG G + LF YF I+ VK
Sbjct: 57 DQTNEFSHNEA----EVIIGGPPCQGFSMAGARNRDGFMGDPRNYLFKHYFNIVKKVK 110
>gi|291544225|emb|CBL17334.1| DNA-methyltransferase (dcm) [Ruminococcus champanellensis 18P13]
Length = 407
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSV--DISEVNRNIVRSWWEQTNQKGTLIDFAD 502
+ + LF+G GG + + + G +V V D S+ R R W N D A+
Sbjct: 74 FSTIELFAGAGGLALGVEKAGFNTLGLVEVDKDASDTLRK-NRPEWRVIND-----DIAN 127
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
V LD + G DL+ GG+PC + + + + R GLE +LFY Y + L+ +
Sbjct: 128 VSCLDLQEYFGLKQ--GELDLLSGGAPCQSFSYAGK--RLGLEDARGTLFYHYAKFLEQL 183
Query: 563 KNMM 566
+ M
Sbjct: 184 QPKM 187
>gi|418519200|ref|ZP_13085307.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
gi|410700593|gb|EKQ59141.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas axonopodis
pv. malvacearum str. GSPB1386]
Length = 400
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+G GG G+R S+ +E++ +++ N T +D D++
Sbjct: 1 MTSLDLFAGAGGLSE-----GLREAGFTSLYANEISPRYAQTY--AANHPATQVDSRDIR 53
Query: 505 QLDANRIEQMIN-AFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++DA ++ +++ G DLV GG PC S + E + LF +Y R +
Sbjct: 54 KVDARKVRKLLGLKRGELDLVAGGPPCQGF--SINAPKRSTEDSRNHLFREYLRFV 107
>gi|229585366|ref|YP_002843868.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.27]
gi|228020416|gb|ACP55823.1| DNA-cytosine methyltransferase [Sulfolobus islandicus M.16.27]
Length = 325
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I V+ LFSG GG + +LG+ K +++DI N R++ N T++ D++
Sbjct: 4 IKVIDLFSGAGGFSLGFKKLGIEPK--LAIDI---NHAAARTY--SLNFPNTIVIEDDIR 56
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSN-RHSRDGLE----GKESSLFYDYFRIL 559
Q+ I + N D++IGG PC +N +D L+ + SL ++ RI+
Sbjct: 57 QISGKEI--LKNVGDEIDVIIGGPPCEGYTAANPLRMQDPLDRLYLDQRGSLTLEFIRIV 114
Query: 560 DLVK 563
D +K
Sbjct: 115 DELK 118
>gi|462651|sp|P34906.1|MTF1_FUSNU RecName: Full=Modification methylase FnuDI; Short=M.FnuDI; AltName:
Full=Cytosine-specific methyltransferase FnuDI
gi|2961231|gb|AAC05695.1| FnuDI DNA modification methyltransferase [Fusobacterium nucleatum]
Length = 344
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 21/117 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ +LSLFSG GG ++ R G + + +E ++ I ++ + N K LI D++
Sbjct: 1 MKLLSLFSGAGGLDLGFERAGFEI-----IVANEYDKTIWETY--EKNHKAKLIK-KDIR 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + + + D +IGG PC + AGS R G+ LFY+Y RIL
Sbjct: 53 EILSEELPKS-------DGIIGGPPCQSWSEAGSLR----GINDPRGKLFYEYIRIL 98
>gi|330718183|ref|ZP_08312783.1| cytosine-specific methyltransferase [Leuconostoc fallax KCTC 3537]
Length = 414
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 15/121 (12%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
+++S F+G+GG ++ G +V +E ++N ++ +GT +D D++Q
Sbjct: 4 DIVSFFAGVGGIDLGFEDAG----EYRTVYANEFDKNAQHTFETNFKSRGTYLDRRDIKQ 59
Query: 506 LDANRIE-QMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
+DA ++ + NA +++ G PC ++AG R G E LF++ RI+ +
Sbjct: 60 VDAKEVKAKAPNA----SVLLAGFPCQPFSIAG----YRHGFEDNRGDLFFETHRIIRFL 111
Query: 563 K 563
+
Sbjct: 112 Q 112
>gi|229579730|ref|YP_002838129.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.G.57.14]
gi|228010445|gb|ACP46207.1| DNA-cytosine methyltransferase [Sulfolobus islandicus Y.G.57.14]
Length = 325
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I V+ LFSG GG + +LG+ K +++DI N R++ N T++ D++
Sbjct: 4 IKVIDLFSGAGGFSLGFKKLGIEPK--LAIDI---NHAAARTY--SLNFPNTIVIEDDIR 56
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSN-RHSRDGLE----GKESSLFYDYFRIL 559
Q+ I + N D++IGG PC +N +D L+ + SL ++ RI+
Sbjct: 57 QISGKEI--LKNVGDEIDVIIGGPPCEGYTAANPLRMQDPLDRLYLDQRGSLTLEFIRIV 114
Query: 560 DLVK 563
D +K
Sbjct: 115 DELK 118
>gi|312863775|ref|ZP_07724013.1| DNA (cytosine-5-)-methyltransferase [Streptococcus vestibularis
F0396]
gi|311101311|gb|EFQ59516.1| DNA (cytosine-5-)-methyltransferase [Streptococcus vestibularis
F0396]
Length = 454
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 11/114 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ +S+ +G I+F D++
Sbjct: 4 MKFLDLFAGIGG-----FRLGLTRQGHECIGFCEIDKFARKSYKAIYKTEGE-IEFHDIR 57
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
Q+ Q+ G D++ GG PC + + R R G E +LF++ R+
Sbjct: 58 QVTDQDFRQLR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIARV 106
>gi|218895988|ref|YP_002444399.1| cytosine-specific methyltransferase [Bacillus cereus G9842]
gi|423371043|ref|ZP_17348383.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus AND1407]
gi|218540614|gb|ACK93008.1| cytosine-specific methyltransferase NlaX [Bacillus cereus G9842]
gi|401102869|gb|EJQ10854.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus AND1407]
Length = 348
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG AL ++ + E+ + + E G +I DV+
Sbjct: 3 LKYLDLFAGIGGFRQALINSSLKNVKFEPIGYCEIEKKCQLVYNEIFGTDGEVI-VDDVK 61
Query: 505 QLDANRIEQMINAFGG-----FDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + M+N G FDL++GG PC SN R GLE LF++ RIL
Sbjct: 62 KIFS---PDMVNVDGSKKLPEFDLLLGGFPCQPF--SNVGYRKGLEDPRGELFFEIVRIL 116
>gi|449274136|gb|EMC83419.1| DNA (cytosine-5)-methyltransferase 3B, partial [Columba livia]
Length = 617
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 14/107 (13%)
Query: 459 VALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMIN 516
+ L LG++++ ++ +I E + +R +G + DV+ + IE+
Sbjct: 381 LVLKDLGIQVEKYIASEICEDPIAVGTMR-------HEGNITYVHDVRNITKRNIEE--- 430
Query: 517 AFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+G FDLVIGGSPCN+ + + +R GL LF++++ +L+ +
Sbjct: 431 -WGPFDLVIGGSPCNDPSLVS-SARKGLYEGTGRLFFEFYHLLNYAR 475
>gi|428221233|ref|YP_007105403.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
gi|427994573|gb|AFY73268.1| DNA-methyltransferase Dcm [Synechococcus sp. PCC 7502]
Length = 167
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 26/117 (22%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
L LFSGIGG +A LG+ + + V+I + +++ +F ++
Sbjct: 4 LDLFSGIGGFTLAAQALGI--ETIQFVEIQDYCCHVLTK------------NFPNIP--- 46
Query: 508 ANRIEQMINAFGG----FDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
I Q I+ F +DL+ GGSPC +L+ + +R G+ G+ SSL+++ R+++
Sbjct: 47 ---IHQDIHTFHAEPNQYDLITGGSPCQDLSLAG--ARTGITGERSSLWFEMLRVIN 98
>gi|365154385|ref|ZP_09350818.1| modification methylase HaeIII [Campylobacter sp. 10_1_50]
gi|363650223|gb|EHL89314.1| modification methylase HaeIII [Campylobacter sp. 10_1_50]
Length = 331
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++SLFSG GG ++ + G ++ V +E ++ I ++ + N LI D+
Sbjct: 1 MNLISLFSGAGGLDLGFEKAGFKV-----VTANEYDKTIWETY--EKNHNTNLIK-GDIC 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ +++ F D +IGG PC + S S G++ LFY Y RIL
Sbjct: 53 TIPSSK-------FPDCDGIIGGPPCQ--SWSEAGSLKGIDDPRGQLFYQYIRIL 98
>gi|425465184|ref|ZP_18844494.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9809]
gi|389832604|emb|CCI23612.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9809]
Length = 462
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 21/129 (16%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTN 492
HL + Y + LF+GIGG +AL +LG R + SE+++ ++ + +
Sbjct: 23 HLVITHPQY----RFIDLFAGIGGFRIALEKLGGR-----CLGYSEIDKQAIQVYQQ--- 70
Query: 493 QKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESS 550
I + + ++ + ++ N DL++GG PC ++AG R G E
Sbjct: 71 ---NFISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWSVAGCLR----GFEDPRGK 123
Query: 551 LFYDYFRIL 559
L++D +++
Sbjct: 124 LWFDVIKLV 132
>gi|325298662|ref|YP_004258579.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170]
gi|324318215|gb|ADY36106.1| DNA-cytosine methyltransferase [Bacteroides salanitronis DSM 18170]
Length = 336
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 17/116 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ H G + ++ +E++ I ++ I+F DV+
Sbjct: 1 MTLISLFSGAGGLDLGFHYAGFK-----TIIANELDAKICPTY---------RINFPDVK 46
Query: 505 QLDANRIEQMINAF-GGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + + F G +IGG PC + S S G+E LFY+Y RIL
Sbjct: 47 LIEGDIRNIPSSEFPDGITGIIGGPPCQSW--SEAGSLKGIEDARGQLFYEYIRIL 100
>gi|401564027|ref|ZP_10804949.1| C-5 cytosine-specific DNA methylase domain protein [Selenomonas sp.
FOBRC6]
gi|400189251|gb|EJO23358.1| C-5 cytosine-specific DNA methylase domain protein [Selenomonas sp.
FOBRC6]
Length = 535
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + SLF G GG LG + + SEV +R T + ++ D+
Sbjct: 2 MTLGSLFDGSGG-----FTLGAVLTGIEPKWASEVEPFPIRV---TTKRLPSVKHLGDIH 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + IE + D++ GSPC NL+ + R R+GL G+ES LF++ RI+
Sbjct: 54 RIHGDEIEPV-------DIITFGSPCTNLSIAGR--REGLHGQESILFFEAIRIV 99
>gi|397904752|ref|ZP_10505647.1| DNA-cytosine methyltransferase( EC:2.1.1.37 ) [Caloramator
australicus RC3]
gi|397162204|emb|CCJ32981.1| DNA-cytosine methyltransferase [Caloramator australicus RC3]
Length = 338
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 20/122 (16%)
Query: 438 KEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTL 497
K +Y G + LF+G+GG +AL LG + V SE++ ++ + E
Sbjct: 7 KSLY--GFTFIDLFAGLGGFRIALESLGAK-----CVFSSEIDESVREVYIENFGD---- 55
Query: 498 IDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
I + D+ Q+D I + D++ G PC + S + G E +LF+D R
Sbjct: 56 IPYGDITQIDEYSIPEH-------DILCAGFPCQAFSISGKQR--GFEDSRGTLFFDIAR 106
Query: 558 IL 559
I+
Sbjct: 107 IV 108
>gi|443476155|ref|ZP_21066075.1| DNA-cytosine methyltransferase [Pseudanabaena biceps PCC 7429]
gi|443018917|gb|ELS33091.1| DNA-cytosine methyltransferase [Pseudanabaena biceps PCC 7429]
Length = 364
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 20/116 (17%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWE--QTNQKGTLIDFADV 503
+V++LFSG GG ++ R G NV + E +++I WE + N T++D D+
Sbjct: 4 SVIALFSGCGGLDLGFRRAGF---NVTWAN--EYDKDI----WETYERNHVDTVLDRRDI 54
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+++ + E++ + G +IGG PC + S ++ G++ LF DY RIL
Sbjct: 55 RKIAS---EEIPDCLG----IIGGPPCQSW--SEGGTQRGIDDARGQLFLDYIRIL 101
>gi|408789603|ref|ZP_11201258.1| DNA-cytosine methyltransferase [Lactobacillus florum 2F]
gi|408521209|gb|EKK21195.1| DNA-cytosine methyltransferase [Lactobacillus florum 2F]
Length = 414
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 15/117 (12%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
+++S F+G+GG ++ G +V +E ++N ++ N++GT +D D+++
Sbjct: 4 DIISFFAGVGGIDLGFEDAG----KYHTVYANEFDKNAQHTFELNFNKRGTYLDRRDIKE 59
Query: 506 LDANRI-EQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ + I +Q NA D+++ G PC ++AG R G + LF++ RI+
Sbjct: 60 VTTDDIRKQTQNA----DVLLAGFPCQPFSVAG----FRKGFDDNRGDLFFETLRII 108
>gi|363889139|ref|ZP_09316505.1| hypothetical protein HMPREF9628_01141 [Eubacteriaceae bacterium
CM5]
gi|361967102|gb|EHL19968.1| hypothetical protein HMPREF9628_01141 [Eubacteriaceae bacterium
CM5]
Length = 323
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
+Y D +NVL LF GIG AL R + K VD E+++N V+S+ N T D
Sbjct: 4 VYIDEVNVLELFGGIGALRKALIRQKIPHK---VVDYVEIDKNCVKSYNALYNADFTPKD 60
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLA--GSNRHSRDGLEGKESSLFYDYFR 557
+ DL++ GSPC + + G + G G SSL ++ R
Sbjct: 61 IVKYHAPNER-----------VDLLMHGSPCQDFSRIGQKKGGVKG-TGTRSSLLFETIR 108
Query: 558 ILD 560
I++
Sbjct: 109 IIE 111
>gi|323486195|ref|ZP_08091524.1| cytosine-specific methyltransferase [Clostridium symbiosum
WAL-14163]
gi|323400521|gb|EGA92890.1| cytosine-specific methyltransferase [Clostridium symbiosum
WAL-14163]
Length = 382
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 28/144 (19%)
Query: 428 DTVAYHLSVLKEMYP-----DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRN 482
+ VAY++S +K+ D + LF+GIGG +A R G +
Sbjct: 33 EAVAYYVSDIKKKTEKSETDDSFRFIDLFAGIGGMRIAYERAG--------------GKC 78
Query: 483 IVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHS 540
+ S W + +Q+ +F + + D ++E D+++ G PC ++AG ++ +
Sbjct: 79 VYSSEWNKYSQQTYFANFGEQPEGDITQVEA--EDIPDHDILVAGFPCQPFSIAGVSKKN 136
Query: 541 R----DGLEGK-ESSLFYDYFRIL 559
G E K + +LF+D RIL
Sbjct: 137 SLGRATGFEDKTQGTLFFDVCRIL 160
>gi|216165|gb|AAA32601.1| methyltransferase (ttg start codon), partial [Bacillus phage
SPbeta]
Length = 143
Score = 45.1 bits (105), Expect = 0.097, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIG E AL +GV + + SE+++ ++S+ N TL + D+
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVDYE---LIGFSEIDKYAIKSYCAIHNVSETL-NVGDIS 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
+ + I FDL+ G PC + + RDG+E K S+ +++
Sbjct: 60 KAKKDNIPY-------FDLLTSGFPCPTFSVAG--GRDGMEYKCSNCSHEHL 102
>gi|422758769|ref|ZP_16812531.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
gi|322411604|gb|EFY02512.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae
subsp. dysgalactiae ATCC 27957]
Length = 451
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ +S+ KG I+F D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGLIRQGHECIGFCEIDKFARKSYKAIYETKGE-IEFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
Q+ Q+ G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 QVTDQDFRQLR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|220929948|ref|YP_002506857.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
gi|220000276|gb|ACL76877.1| DNA-cytosine methyltransferase [Clostridium cellulolyticum H10]
Length = 338
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 18/123 (14%)
Query: 437 LKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGT 496
+KE G + LF+G+GG +AL LG + + + W++ +K
Sbjct: 4 VKEKSLLGFKFIDLFAGLGGFRIALESLGAKC--------------VYSNEWDKPVRKVY 49
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
+F D+ + D +I + N+ D++ G PC + S + G E +LF+D
Sbjct: 50 TDNFGDIPEGDITQINE--NSIPEHDILCAGFPCQAFSISGKQR--GFEDSRGTLFFDVA 105
Query: 557 RIL 559
RI+
Sbjct: 106 RIV 108
>gi|9630267|ref|NP_046694.1| modification methylase [Bacillus phage SPBc2]
gi|16079084|ref|NP_389907.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis subsp.
subtilis str. 168]
gi|221309931|ref|ZP_03591778.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str.
168]
gi|221314254|ref|ZP_03596059.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221319176|ref|ZP_03600470.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221323451|ref|ZP_03604745.1| modification methylase Bsu [Bacillus subtilis subsp. subtilis str.
SMY]
gi|452915942|ref|ZP_21964567.1| modification methylase BanI [Bacillus subtilis MB73/2]
gi|56405062|sp|P68585.1|MTBP_BACSU RecName: Full=Phi-3T prophage-derived modification methylase
Phi3TI; Short=M.Phi3TI; AltName: Full=Cytosine-specific
methyltransferase Phi3TI
gi|56405063|sp|P68586.1|MTBP_BPPHT RecName: Full=Modification methylase Phi3TI; Short=M.Phi3TI;
AltName: Full=Cytosine-specific methyltransferase Phi3TI
gi|7433506|pir||T12906 modification methylase - Bacillus subtilis phage SPBc2
gi|215471|gb|AAA32352.1| methyltransferase (ttg start codon) [Bacillus phage phi3T]
gi|2634418|emb|CAB13917.1| DNA (cytosine-5-)-methyltransferase; phage SPbeta [Bacillus
subtilis subsp. subtilis str. 168]
gi|3025620|gb|AAC13115.1| modification methylase [Bacillus phage SPbeta]
gi|452114952|gb|EME05349.1| modification methylase BanI [Bacillus subtilis MB73/2]
Length = 443
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIG E AL +GV + + SE+++ ++S+ N TL + D+
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGV---DYELIGFSEIDKYAIKSYCAIHNVSETL-NVGDIS 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
+ + I FDL+ G PC + + RDG+E K S+ +++
Sbjct: 60 KAKKDNIPY-------FDLLTSGFPCPTFSVAG--GRDGMEYKCSNCSHEHL 102
>gi|402776277|ref|YP_006630221.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis QB928]
gi|402481458|gb|AFQ57967.1| DNA (cytosine-5-)-methyltransferase [Bacillus subtilis QB928]
Length = 444
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIG E AL +GV + + SE+++ ++S+ N TL + D+
Sbjct: 5 LRVMSLFSGIGAFEAALRNIGV---DYELIGFSEIDKYAIKSYCAIHNVSETL-NVGDIS 60
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
+ + I FDL+ G PC + + RDG+E K S+ +++
Sbjct: 61 KAKKDNIPY-------FDLLTSGFPCPTFSVAG--GRDGMEYKCSNCSHEHL 103
>gi|254804563|ref|YP_003082784.1| putative type II DNA modification methylase [Neisseria meningitidis
alpha14]
gi|421554152|ref|ZP_16000100.1| cytosine-specific methyltransferase [Neisseria meningitidis 98008]
gi|254668105|emb|CBA04653.1| putative type II DNA modification methylase [Neisseria meningitidis
alpha14]
gi|402333422|gb|EJU68725.1| cytosine-specific methyltransferase [Neisseria meningitidis 98008]
Length = 450
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 386 NKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAY 432
+KL L P E E L+GFP N+T G +T+RY+++GNS+ + + +
Sbjct: 270 DKLRRLSPLECERLMGFPDNYTLIDGAKKTNRYQAIGNSWAIPVIKW 316
>gi|366162865|ref|ZP_09462620.1| DNA-cytosine methyltransferase [Acetivibrio cellulolyticus CD2]
Length = 632
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 17/117 (14%)
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD 502
D + + SLF G GG LG + +V + SE+ +R T + + + D
Sbjct: 3 DKLTLGSLFDGSGG-----FPLGALLNGIVPIWASEIEPFPIRV---TTKRLPFVKHYGD 54
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+++++ IE + D++ GSPC +++ + + R GL+GK+S LF++ RI+
Sbjct: 55 IRKINGAEIEPV-------DIITFGSPCTDMSVAGK--RAGLDGKQSVLFHEAIRII 102
>gi|304372874|ref|YP_003856083.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1]
gi|304309065|gb|ADM21545.1| Cytosine-specific methyltransferase [Mycoplasma hyorhinis HUB-1]
Length = 413
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 36/211 (17%)
Query: 368 QKFVMDECRKWNLVWVGRN-KLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQ 426
QKF+ E K +L+ +N K L+ + L + K + I +
Sbjct: 17 QKFIRKEIAKKSLISTKQNNKYLILDSHYQDWKLSYKKEASSNKKIGK------------ 64
Query: 427 VDTVAYHLSVLKEM---------YPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDIS 477
++ + VLKEM Y +G + LFSG GG L G + + SV+I
Sbjct: 65 IEEKVQFIDVLKEMNKLDGWNSNYKNGYKFIDLFSGAGGLSCGLVMAG--FEPIASVEIM 122
Query: 478 EVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAF--GGFDLVIGGSPCNNLA- 534
++ +K LI+ D++ D E++ N F DL++GG PC +
Sbjct: 123 PDAVETYVYNFQNRKKKEELIETRDIR--DVKVKEELYNKFKDTDIDLIVGGFPCQGFSM 180
Query: 535 GSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
NR D +SL Y +L++VKN+
Sbjct: 181 AGNRVVDDP----RNSL---YLEMLEIVKNL 204
>gi|60202518|gb|AAX14650.1| BbvCI methyltransferase 1 [Brevibacillus brevis]
Length = 429
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 16/118 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQT---NQKGTLIDFA 501
+ + LF+G GG + G R+ + + VD W +T N T +
Sbjct: 19 LTAIDLFAGAGGFSLGFSMAGFRVTHAIEVD----------KWAAETFEVNFPRTKVVTR 68
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+QQ+ I+ +I+ +VIGG PC + SN +++D + + +SLF +Y R +
Sbjct: 69 DIQQISDEEIKDIIDERPL--VVIGGPPCQGFSHSNVNNKDPKDPR-NSLFQEYMRFV 123
>gi|374338337|ref|YP_005095049.1| Modification methylase HgiDII [Streptococcus macedonicus ACA-DC
198]
gi|372284449|emb|CCF02721.1| Modification methylase HgiDII [Streptococcus macedonicus ACA-DC
198]
Length = 451
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ +S+ + +G I+F D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGLTRQGHECIGFCEIDKFARKSYQAIYDTEGE-IEFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
Q+ Q+ G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 QVTDQDFRQLR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|343515669|ref|ZP_08752720.1| DNA-cytosine methyltransferase [Vibrio sp. N418]
gi|342797839|gb|EGU33476.1| DNA-cytosine methyltransferase [Vibrio sp. N418]
Length = 390
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
++ + LF+G GG +A H+ G+ + + +D S R ++ E+ NQ L++ D+
Sbjct: 1 MSAIDLFAGAGGFSLAAHQAGLDVLAAIELD-SSAARTYQKNIIERLNQPTKLLN-GDIL 58
Query: 505 QLDANRI-EQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
++D + E++ G +L++GG PC + S+R G++ + L Y+ ++
Sbjct: 59 KIDPLMLREELGLRRGQLELILGGPPCQGFS-SHRIKNAGVDDPRNKLLLRYYDFVE 114
>gi|166368611|ref|YP_001660884.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
gi|166090984|dbj|BAG05692.1| cytosine-specific methyltransferase [Microcystis aeruginosa
NIES-843]
Length = 464
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 24/147 (16%)
Query: 418 YKSLGNSFQVDT---VAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSV 474
Y L + +V T + HL + Y + LF+GIGG +AL +LG R +
Sbjct: 6 YLPLKTTVKVSTQTQLPLHLVITHPQY----RFIDLFAGIGGFRIALEKLGGR-----CL 56
Query: 475 DISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--N 532
SE+++ ++ + + I + + ++ + ++ N D ++GG PC +
Sbjct: 57 GYSEIDKQAIQVYQQ------NFISYLNSNEIAFGDVSKISNLPDNLDFIVGGVPCQPWS 110
Query: 533 LAGSNRHSRDGLEGKESSLFYDYFRIL 559
+AG R G E L++D +++
Sbjct: 111 VAGCLR----GFEDPRGKLWFDVIKLV 133
>gi|392396710|ref|YP_006433311.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
gi|390527788|gb|AFM03518.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
Length = 343
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 16/116 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++S F+G GG ++ + G + + +E ++ I ++ Q N T++D +
Sbjct: 1 MKIVSFFAGAGGLDLGFKKAGFDI-----IWANEYDKEIWETY--QKNHSQTILDKRSIV 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+ N + D +IGG PC + + + + G++ K LFYD+ RIL+
Sbjct: 54 DIATNEVPDC-------DGIIGGPPCQSWSEAGKAR--GIKDKRGQLFYDFIRILE 100
>gi|357048861|ref|ZP_09110094.1| hypothetical protein HMPREF9478_00077 [Enterococcus saccharolyticus
30_1]
gi|355384684|gb|EHG31745.1| hypothetical protein HMPREF9478_00077 [Enterococcus saccharolyticus
30_1]
Length = 333
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 57/114 (50%), Gaps = 8/114 (7%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
++SLFSG GG + LG +N +V E ++ I +++ + + D++ +
Sbjct: 6 MISLFSGAGGMD-----LGFEKENFTNVFSVEFDKKIAKTYEKNFPNNNLFV--GDIRDV 58
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
D +I +++ D+VIGG PC + + R ++ + LF ++ R+++
Sbjct: 59 DNKKINELMGN-EIVDVVIGGPPCQGFSMAGNIGRKFVDDPRNQLFKEFVRVVN 111
>gi|434394728|ref|YP_007129675.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
gi|428266569|gb|AFZ32515.1| DNA-cytosine methyltransferase [Gloeocapsa sp. PCC 7428]
Length = 372
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+SLFSG GG +V R GV +VVS + +++R+ ++ + N G +I +D+ +
Sbjct: 10 ISLFSGAGGMDVGFIRAGV---DVVSAN--DIDRDACLTY--EANHPGGIIKCSDINEYL 62
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLA 534
+ I+ F G DLV GG PC +
Sbjct: 63 ID-----IHRFKGIDLVFGGPPCQGFS 84
>gi|410495028|ref|YP_006904874.1| DNA (cytosine-5-)-methyltransferase [Streptococcus dysgalactiae
subsp. equisimilis AC-2713]
gi|410440188|emb|CCI62816.1| K00558 DNA (cytosine-5-)-methyltransferase [Streptococcus
dysgalactiae subsp. equisimilis AC-2713]
Length = 248
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG + L R G + + +I + R ++ +E + I+F D++
Sbjct: 1 MKFLDLFAGIGGFRLGLTRQG--HECIGFCEIDKFARKSYKAIYETEGE----IEFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
Q+ Q+ G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 QVTDQDFRQLR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|4877793|gb|AAD31434.1| DNA methyltransferase 3 beta 5 [Homo sapiens]
Length = 177
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 515 INAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
I +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+
Sbjct: 1 IEEWGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLN 45
>gi|266620546|ref|ZP_06113481.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM
13479]
gi|288867840|gb|EFD00139.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM
13479]
Length = 521
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LF+G GG G + V +E N+N +++ E + + DV+
Sbjct: 2 LKTIDLFAGAGGLSYGFESTG----EFLIVAAAENNKNARKTYIENHKGRNDIRMIPDVR 57
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D + + F G D+VIGG PC + +NR ++ + +SL ++FR +
Sbjct: 58 GYD---FSALASEFDGIDVVIGGPPCQGFSNANRQ-KNHIISMNNSLVKEFFRAI 108
>gi|300867442|ref|ZP_07112096.1| Modification methylase MthTI [Oscillatoria sp. PCC 6506]
gi|300334557|emb|CBN57264.1| Modification methylase MthTI [Oscillatoria sp. PCC 6506]
Length = 350
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 24/118 (20%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWE--QTNQKGTLIDFADV 503
++++LFSG GG ++ + G NV+ SE +++I WE + N T +D D+
Sbjct: 8 SIVALFSGCGGLDLGFSQAGF---NVIWA--SEYDKDI----WETYENNHPDTFLDKRDI 58
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
+ + + I +IGGSPC + AG R G++ LF DY RIL
Sbjct: 59 RAISSAEIPDCTG-------IIGGSPCQSWSEAGMQR----GIDDYRGKLFLDYVRIL 105
>gi|407943617|pdb|3UBT|Y Chain Y, Crystal Structure Of C71s Mutant Of Dna Cytosine-5
Methyltransferase M.Haeiii Bound To Dna
gi|407943618|pdb|3UBT|A Chain A, Crystal Structure Of C71s Mutant Of Dna Cytosine-5
Methyltransferase M.Haeiii Bound To Dna
gi|407943619|pdb|3UBT|B Chain B, Crystal Structure Of C71s Mutant Of Dna Cytosine-5
Methyltransferase M.Haeiii Bound To Dna
Length = 331
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++SLFSG GG ++ + G R+ + +E +++I +++ ++N LI D+
Sbjct: 1 MNLISLFSGAGGLDLGFQKAGFRI-----ICANEYDKSIWKTY--ESNHSAKLIK-GDIS 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ ++ F D +IGG P + S S G++ LFY+Y RIL
Sbjct: 53 KISSDE-------FPKCDGIIGGPPSQ--SWSEGGSLRGIDDPRGKLFYEYIRIL 98
>gi|425454182|ref|ZP_18833928.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9807]
gi|389805203|emb|CCI15146.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9807]
Length = 459
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 21/129 (16%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTN 492
HL + Y + LF+GIGG +AL +LG R + SE+++ ++ + +
Sbjct: 23 HLVITHPQY----RFVDLFAGIGGFRIALEKLGGR-----CLGYSEIDKQAIQVYQQ--- 70
Query: 493 QKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESS 550
I + + ++ + ++ N DL++GG PC ++AG R G E
Sbjct: 71 ---NFISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWSVAGCLR----GFEDPRGK 123
Query: 551 LFYDYFRIL 559
L++D +++
Sbjct: 124 LWFDVIKLV 132
>gi|379011715|ref|YP_005269527.1| putative DNA methylase [Acetobacterium woodii DSM 1030]
gi|375302504|gb|AFA48638.1| putative DNA methylase [Acetobacterium woodii DSM 1030]
Length = 400
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 428 DTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSW 487
+ V + LS K + +G + LF+GIGG +A G + S
Sbjct: 34 EAVLHMLSNRKNVTGNGFKFIDLFAGIGGMRLAFEANG--------------GECVFSSE 79
Query: 488 WEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAG---SNRHSRD 542
W++ QK +F D+ D ++++ D+++ G PC ++AG N RD
Sbjct: 80 WDKYCQKTYFENFGDLPVGDIRQVDE--KEIPDHDILVAGFPCQPFSIAGVSKKNSMGRD 137
Query: 543 -GLEGK-ESSLFYDYFRILD 560
G + K + +LF+D RILD
Sbjct: 138 HGFKDKTQGTLFFDVVRILD 157
>gi|317057160|ref|YP_004105627.1| XRE family transcriptional regulator [Ruminococcus albus 7]
gi|315449429|gb|ADU22993.1| transcriptional regulator, XRE family [Ruminococcus albus 7]
Length = 407
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 14/125 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVD---ISEVNRNIVRSWWEQTNQKGTLIDFA 501
+ + LF+G GG + + + G +V VD + RN R W N D A
Sbjct: 74 FSTIELFAGAGGLALGVEKAGFITLGLVEVDKDASDTLRRN--RPEWRVIND-----DIA 126
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
++ LD + G DL+ GG+PC + + + + R GLE +LFY Y + L+
Sbjct: 127 NISCLDLQDYFGLKK--GELDLLSGGAPCQSFSYAGK--RLGLEDARGTLFYHYAKFLEQ 182
Query: 562 VKNMM 566
++ M
Sbjct: 183 LQPKM 187
>gi|429735650|ref|ZP_19269590.1| hypothetical protein HMPREF9163_00433, partial [Selenomonas sp.
oral taxon 138 str. F0429]
gi|429157485|gb|EKY00074.1| hypothetical protein HMPREF9163_00433, partial [Selenomonas sp.
oral taxon 138 str. F0429]
Length = 149
Score = 44.7 bits (104), Expect = 0.12, Method: Composition-based stats.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 17/111 (15%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF G GG LG + + SEV +R T + ++ D+ +
Sbjct: 6 SLFDGSGG-----FTLGAVLAGITPKWASEVEPFPIRV---TTKRLPSVKHLGDIHNIRG 57
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++IE + D++ GSPC NL+ + R R+GL G+ES LF++ RI+
Sbjct: 58 DKIEPV-------DIITFGSPCTNLSIAGR--REGLHGQESILFFEAIRIV 99
>gi|294794108|ref|ZP_06759245.1| DNA (cytosine-5-)-methyltransferase [Veillonella sp. 3_1_44]
gi|294455678|gb|EFG24050.1| DNA (cytosine-5-)-methyltransferase [Veillonella sp. 3_1_44]
Length = 527
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 59/123 (47%), Gaps = 15/123 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID----F 500
+ + LF+G GG + G + K + + +E+N+N Q K +++ F
Sbjct: 2 LKTIDLFAGAGGLSLGFEMTG-KFKVLAA---AEINKN------AQATYKKNIVEGKPTF 51
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
++ ++ ++ GG D+VIGG PC + +NR ++ L +SL ++FR +
Sbjct: 52 TMIEDINGYDFMELNEKLGGIDVVIGGPPCQGFSNANRQ-KNHLISMNNSLVKEFFRAIK 110
Query: 561 LVK 563
+K
Sbjct: 111 EIK 113
>gi|319644454|ref|ZP_07998887.1| hypothetical protein HMPREF9011_04490 [Bacteroides sp. 3_1_40A]
gi|317384095|gb|EFV65072.1| hypothetical protein HMPREF9011_04490 [Bacteroides sp. 3_1_40A]
Length = 139
Score = 44.7 bits (104), Expect = 0.13, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 19/119 (15%)
Query: 445 INVLSLFSGIGGA----EVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
I + LF+GIGG E+A H G + + V + SE+ ++ ++ + N LI+
Sbjct: 5 IKFIDLFAGIGGIRCGLELAAHEAGYKTECVFT---SEIKKHAIKVL--KQNHPNELIN- 58
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ Q++ I FD+ G PC + +G + R G +LF+D RIL
Sbjct: 59 GDITQVNEKEIPD-------FDICCAGFPCQSFSGGGK--RLGFTETRGTLFFDVERIL 108
>gi|417840225|ref|ZP_12486373.1| Modification methylase HpaII [Haemophilus haemolyticus M19107]
gi|341949704|gb|EGT76306.1| Modification methylase HpaII [Haemophilus haemolyticus M19107]
Length = 359
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 16/112 (14%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +A+ LG + + S W++ QK +F D+ D
Sbjct: 37 IDLFAGIGGFRLAMQNLG--------------GKCVFSSEWDEQAQKTYAANFGDIPYGD 82
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
E FD++ G PC + + + R G E +LF+D I+
Sbjct: 83 ITLEETKARIPKEFDILCAGFPCQAFSIAGK--RGGFEDTRGTLFFDVAEII 132
>gi|225869346|ref|YP_002745294.1| C-5 cytosine-specific DNA methylase [Streptococcus equi subsp.
zooepidemicus]
gi|225702622|emb|CAX00673.1| C-5 cytosine-specific DNA methylase [Streptococcus equi subsp.
zooepidemicus]
Length = 451
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG + L R G K + +I + R ++ +E + I+F D++
Sbjct: 1 MKFLDLFAGIGGFRLGLTRQG--HKCIGFCEIDKFARKSYKAIYETKGE----IEFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
Q+ Q+ G D++ GG PC + + R R G E + F++ R
Sbjct: 55 QVTDQDFRQLR---GQMDIICGGFPCQAFSLAGR--RLGFEDTRGTWFFEIAR 102
>gi|161869727|ref|YP_001598894.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
meningitidis 053442]
gi|161595280|gb|ABX72940.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria
meningitidis 053442]
Length = 374
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQK--GTLIDFADVQ 504
+LSLFSG GG ++ H+ G + V + D S W ++ +K G +I D++
Sbjct: 18 ILSLFSGCGGLDLGFHQAG--YETVWANDFSH--------WACESFRKNIGDVIVEGDIE 67
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
Q+D N D+++GG PC + S + GLEG+ +L+ + R ++ K
Sbjct: 68 QIDPNN-----PTIPDCDIILGGFPCQDF--SMIWKQPGLEGERGNLYKSFLRFVNAKK 119
>gi|4877789|gb|AAD31432.1| DNA methyltransferase 3 beta 1 [Homo sapiens]
Length = 218
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 515 INAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
I +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+
Sbjct: 1 IEEWGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLN 45
>gi|422794573|ref|ZP_16847248.1| DNA-cytosine methyltransferase, partial [Escherichia coli TA007]
gi|323968854|gb|EGB64190.1| DNA-cytosine methyltransferase [Escherichia coli TA007]
Length = 272
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 21/123 (17%)
Query: 441 YPDGIN----VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGT 496
YP+ N ++ LF+GIGG RLG N V+V + S W++ QK
Sbjct: 64 YPNNENGRYRMIDLFAGIGGT-----RLGFHQTNAVNV--------VFSSEWDKFAQKTY 110
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
++ D D +I++ ++++GG PC +A S + G +LF+D
Sbjct: 111 HANYGDFPDGDITKIDE--KDIPDHEILVGGFPC--VAFSQAGLKKGFNDTRGTLFFDIA 166
Query: 557 RIL 559
RI+
Sbjct: 167 RII 169
>gi|385216117|ref|YP_005776074.1| Type II DNA modification enzyme [Helicobacter pylori F32]
gi|317180646|dbj|BAJ58432.1| Type II DNA modification enzyme [Helicobacter pylori F32]
Length = 348
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVS-VDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
V +F G GG G M + ++++++ + S+ Q N K T D+ Q
Sbjct: 4 VADIFCGAGGLSY-----GFSMHPYFELIWANDIDKDAILSY--QANHKETQTILCDIMQ 56
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
LD + + + D+++GG PC + + + D ++++LF +Y R+LDLVK
Sbjct: 57 LDCHNLPCV-----SIDILLGGPPCQSYSTLGKRKMD----EKANLFKEYLRLLDLVKPK 107
Query: 566 M 566
M
Sbjct: 108 M 108
>gi|416053093|ref|ZP_11578704.1| cell division protein MukB [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|418464457|ref|ZP_13035397.1| Type II modification methyltransferase HpaII/DNA
(cytosine-5-)-methyltransferase [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|347991393|gb|EGY32869.1| cell division protein MukB [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|359757253|gb|EHK91409.1| Type II modification methyltransferase HpaII/DNA
(cytosine-5-)-methyltransferase [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 359
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 16/125 (12%)
Query: 435 SVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQK 494
++ K + + LF+GIGG +A+ LG + + S W++ QK
Sbjct: 24 AIFKSDIKEKFTFIDLFAGIGGFRIAMQNLG--------------GKCVFSSEWDEQAQK 69
Query: 495 GTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYD 554
+F D+ D E FD++ G PC + + + R G E +LF+D
Sbjct: 70 TYEANFGDLPYGDITLEETKSVIPKKFDILCAGFPCQAFSIAGK--RGGFEDTRGTLFFD 127
Query: 555 YFRIL 559
I+
Sbjct: 128 VAEII 132
>gi|208289|gb|AAA72678.1| Mtase protein (ttg start codon) [synthetic construct]
Length = 474
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIG E AL +GV + + SE+++ ++S+ N TL + D+
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVDYE---LIGFSEIDKYAIKSYCAIHNVSETL-NVGDIS 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
+ + I FDL+ G PC + + RDG+E K S+ +++
Sbjct: 60 KAKKDNIPY-------FDLLTSGFPCPTFSVAG--GRDGMEYKCSNCSHEHL 102
>gi|239918514|ref|YP_002958072.1| DNA-methyltransferase Dcm [Micrococcus luteus NCTC 2665]
gi|281415284|ref|ZP_06247026.1| DNA-methyltransferase Dcm [Micrococcus luteus NCTC 2665]
gi|239839721|gb|ACS31518.1| DNA-methyltransferase Dcm [Micrococcus luteus NCTC 2665]
Length = 315
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
M + + S F+GIGG ++ G+R V +I + ++ W + +GT I+
Sbjct: 8 MLDTSLRMASFFTGIGGFDLGFENAGIR--TVYQCEIKDFCNQVLEYHWPEI-PRGTNIE 64
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHS-RDGLEGKESSLFYDYFRI 558
+ + D+ GG PC +++ + S R GL G +S LF+++ R+
Sbjct: 65 LVNPDDIPEA------------DIWTGGFPCQDISLARMSSERKGLHGSQSRLFFEFERL 112
Query: 559 LD 560
L+
Sbjct: 113 LE 114
>gi|15897209|ref|NP_341814.1| DNA modification methylase, type II R/M system [Sulfolobus
solfataricus P2]
gi|284174455|ref|ZP_06388424.1| DNA modification methylase, type II R/M system [Sulfolobus
solfataricus 98/2]
gi|384433723|ref|YP_005643081.1| DNA-cytosine methyltransferase [Sulfolobus solfataricus 98/2]
gi|13813404|gb|AAK40604.1| DNA modification methylase, type II R/M system [Sulfolobus
solfataricus P2]
gi|261601877|gb|ACX91480.1| DNA-cytosine methyltransferase [Sulfolobus solfataricus 98/2]
Length = 325
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I ++ LFSG GG + +LG+ K +++DI N R++ N T++ D++
Sbjct: 4 IKIIDLFSGAGGFSLGFKKLGIEPK--LAIDI---NHAATRTY--SLNFPNTIVIEDDIR 56
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSN-RHSRDGLE----GKESSLFYDYFRIL 559
++ I + N D+VIGG PC +N +D L+ + +L ++ RI+
Sbjct: 57 EISGGEI--LKNVGNDIDVVIGGPPCEGYTAANPLRMQDPLDRLYLDQRGNLTLEFIRIV 114
Query: 560 DLVK 563
D VK
Sbjct: 115 DEVK 118
>gi|124002907|ref|ZP_01687758.1| modification methylase PspPI [Microscilla marina ATCC 23134]
gi|123991557|gb|EAY30965.1| modification methylase PspPI [Microscilla marina ATCC 23134]
Length = 353
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLFSG+GG ++A R+G NV +V+ + + I+R +W T + D++Q +
Sbjct: 5 SLFSGMGGFDLAAERMG--WVNVFTVENNPFCQTILRHYWPDTTH------YEDIRQTN- 55
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRD 542
+G DL+ GG PC AG R D
Sbjct: 56 -----FTPHYGQIDLLTGGFPCQPFSQAGKRRGIND 86
>gi|417845616|ref|ZP_12491642.1| Modification methylase HpaII [Haemophilus haemolyticus M21639]
gi|341954685|gb|EGT81158.1| Modification methylase HpaII [Haemophilus haemolyticus M21639]
Length = 359
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 16/112 (14%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +A+ LG + + S W++ QK +F D+ D
Sbjct: 37 IDLFAGIGGFRLAMQNLG--------------GKCVFSSEWDEQAQKTYAANFGDIPYGD 82
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
E FD++ G PC + + + R G E +LF+D I+
Sbjct: 83 ITLEETKARIPKEFDILCAGFPCQAFSIAGK--RGGFEDTRGTLFFDVAEII 132
>gi|433590552|ref|YP_007280048.1| DNA-methyltransferase Dcm [Natrinema pellirubrum DSM 15624]
gi|433305332|gb|AGB31144.1| DNA-methyltransferase Dcm [Natrinema pellirubrum DSM 15624]
Length = 647
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 10/122 (8%)
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTN--QKGTLIDF 500
D I V SLF+G GG ++ L DI ++ + +R+ E+ + +I+
Sbjct: 3 DRIRVASLFTGAGGLDIGFSTLS-EFDVRFHTDIDDIAIDTLRTNAERGSYIDDDAIIER 61
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRD--GLEGKESSLFYDYFRI 558
D+ + D +E DLVIGG PC + + R S G + ++ LF Y ++
Sbjct: 62 TDITEYDGGDLEP-----DEVDLVIGGPPCQPFSAAARRSGGFAGADSEDGQLFRAYVKL 116
Query: 559 LD 560
L+
Sbjct: 117 LE 118
>gi|171472518|dbj|BAG15985.1| DNA methyltransferase 3A [Meriones unguiculatus]
Length = 176
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 518 FGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 2 WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 42
>gi|418963568|ref|ZP_13515403.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383342892|gb|EID21092.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 333
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+ LF+G GG + + + G ++ +D + + + N+ + D++
Sbjct: 1 MKVIELFAGAGGLALGIEKAGFESIGLIELDKAASDT-------LKYNRPNWNVLHEDIE 53
Query: 505 QLDANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ +E + N G DL+ GG+PC + S +R GLE +LFY Y LD ++
Sbjct: 54 KISPLNLEDLFNIKKGELDLLSGGAPCQSF--SYAGNRLGLEDARGTLFYHYAVFLDKLQ 111
Query: 564 NMM 566
M
Sbjct: 112 PKM 114
>gi|306821027|ref|ZP_07454646.1| possible DNA (cytosine-5-)-methyltransferase [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304550968|gb|EFM38940.1| possible DNA (cytosine-5-)-methyltransferase [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 317
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 17/123 (13%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
+Y D +NVL LF GIG AL R + K VD E+++N V+S+ N T D
Sbjct: 4 VYIDEVNVLELFGGIGALRKALIRQKIPHK---VVDYVEIDKNCVKSYNALYNADFTPKD 60
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLA--GSNRHSRDGLEGKESSLFYDYFR 557
+ DL++ GSPC + + G + G G SSL ++ R
Sbjct: 61 IVKYHAPNER-----------VDLLMHGSPCQDFSRIGQKKGGVKG-TGTRSSLLFETVR 108
Query: 558 ILD 560
I++
Sbjct: 109 IIE 111
>gi|442322885|ref|YP_007362906.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
gi|441490527|gb|AGC47222.1| DNA-cytosine methyltransferase [Myxococcus stipitatus DSM 14675]
Length = 421
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 19/115 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+++ LF+GIGG E G+RM + + E++ VR + A
Sbjct: 31 LSIAGLFAGIGGLE-----RGLRMAGHHTRMLCEIDEPAVR------------VLKAHFP 73
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ R + + A DLV+ G PC +L+ + R + G+ G S L + FR+L
Sbjct: 74 EVQLERDVREVKALPSIDLVVAGFPCQDLSQAGRTA--GITGARSGLVGEVFRLL 126
>gi|298677086|ref|NP_001177350.1| DNA methyltransferase 3 [Apis mellifera]
gi|296883331|gb|ADH84015.1| DNA methyltransferase 3 [Apis mellifera]
Length = 758
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS--LFYD 554
++ +V+ + N I+++ DL+IGGSPCN+L+ +N +R GL + LF++
Sbjct: 518 ILQLGNVKDITCNTIKEI----APIDLLIGGSPCNDLSLAN-PARLGLHDPRGTGVLFFE 572
Query: 555 YFRILDLVKNM 565
Y RIL LV+ +
Sbjct: 573 YRRILKLVRKL 583
>gi|1871451|dbj|BAA11167.1| C5-cytosine methylase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|3421011|emb|CAA76526.1| M.Ecl18kI (DNA-methyltransferase) [Enterobacter cloacae]
gi|360047424|gb|AEV93420.1| type II DNA-methyltransferase StyD4I [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 379
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 21/123 (17%)
Query: 441 YPDGIN----VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGT 496
YP+ N ++ LF+GIGG RLG N V+V + S W++ QK
Sbjct: 64 YPNNENGRYRMIDLFAGIGGT-----RLGFHQTNAVNV--------VFSSEWDKFAQKTY 110
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
++ D D +I++ ++++GG PC +A S + G +LF+D
Sbjct: 111 HANYGDFPDGDITKIDE--KDIPDHEILVGGFPC--VAFSQAGLKKGFNDTRGTLFFDIA 166
Query: 557 RIL 559
RI+
Sbjct: 167 RII 169
>gi|127459|sp|P15446.1|MTH2_HAEPA RecName: Full=Modification methylase HpaII; Short=M.HpaII; AltName:
Full=Cytosine-specific methyltransferase HpaII
gi|43630|emb|CAA35705.1| unnamed protein product [Haemophilus parainfluenzae]
gi|305377|gb|AAA20481.1| HpaII modification methyltransferase [Haemophilus parainfluenzae]
Length = 358
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 16/115 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ LF+GIGG +A+ LG + I S W++ QK +F D+
Sbjct: 32 FTFIDLFAGIGGFRIAMQNLG--------------GKCIFSSEWDEQAQKTYEANFGDLP 77
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D E FD++ G PC + + + R G E +LF+D I+
Sbjct: 78 YGDITLEETKAFIPEKFDILCAGFPCQAFSIAGK--RGGFEDTRGTLFFDVAEII 130
>gi|440753494|ref|ZP_20932697.1| modification methylase BanI [Microcystis aeruginosa TAIHU98]
gi|440177987|gb|ELP57260.1| modification methylase BanI [Microcystis aeruginosa TAIHU98]
Length = 456
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 17/114 (14%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +AL +LG R + SE+++ ++ + + I + + ++
Sbjct: 27 VDLFAGIGGFRIALEKLGGR-----CLGYSEIDKQAIQVYQQ------NFISYLNSDEIA 75
Query: 508 ANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ ++ N DL++GG PC ++AG R G E L++D +++
Sbjct: 76 FGDVSKISNLPDNLDLIVGGVPCQPWSVAGCLR----GFEDPRGKLWFDVIKLV 125
>gi|407072373|ref|ZP_11103211.1| cytosine specific DNA methyltransferase [Vibrio cyclitrophicus
ZF14]
Length = 391
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 61/120 (50%), Gaps = 10/120 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV---NRNIVRSWWEQTNQKGTLIDFA 501
++ + LF+G GG +A H+ G+ + + +D S +NI+ E+ QK L++
Sbjct: 1 MSAIDLFAGAGGFSLAAHQAGLDVLAAIELDASAAQTYQKNII----ERLEQKTKLLN-G 55
Query: 502 DVQQLDANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
D+ ++D + + + + G L++GG PC + S+R G++ + L Y+ ++
Sbjct: 56 DILKIDPSELRKELGLKKGELQLILGGPPCQGFS-SHRIKDAGVDDPRNKLLLRYYDFVE 114
>gi|225076231|ref|ZP_03719430.1| hypothetical protein NEIFLAOT_01268 [Neisseria flavescens
NRL30031/H210]
gi|224952355|gb|EEG33564.1| hypothetical protein NEIFLAOT_01268 [Neisseria flavescens
NRL30031/H210]
Length = 374
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQK--GTLIDFADVQ 504
+LSLFSG GG ++ H+ G + V + D S W ++ +K G +I D++
Sbjct: 18 ILSLFSGCGGLDLGFHQAG--YETVWANDFSH--------WACESFRKNIGDVIVEGDIE 67
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
Q+D N D+++GG PC + S + GLEG+ +L+ + R ++ K
Sbjct: 68 QIDPND-----PTIPDCDIILGGFPCQDF--SMIWKQPGLEGERGNLYKSFLRFVNAKK 119
>gi|422302716|ref|ZP_16390075.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9806]
gi|389787960|emb|CCI16678.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9806]
Length = 460
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 24/147 (16%)
Query: 418 YKSLGNSFQVDT---VAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSV 474
Y L + +V T + HL + Y + LF+GIGG +AL +LG R +
Sbjct: 6 YLPLKTTVKVSTQTQLPLHLVITHPQY----RFIDLFAGIGGFRIALEKLGGR-----CL 56
Query: 475 DISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--N 532
SE+++ ++ + + I + + ++ + ++ N D ++GG PC +
Sbjct: 57 GYSEIDKQAIQVYQQ------NFISYLNSDEIAFGDVSKISNLPDNLDFIVGGVPCQPWS 110
Query: 533 LAGSNRHSRDGLEGKESSLFYDYFRIL 559
+AG R G E L++D +++
Sbjct: 111 VAGCLR----GFEDPRGKLWFDVIKLV 133
>gi|219122422|ref|XP_002181544.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406820|gb|EEC46758.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 495
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 51/114 (44%), Gaps = 16/114 (14%)
Query: 450 LFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDAN 509
LF+GIGG VAL LG + V +I EV R + + NQ G D +V+ D
Sbjct: 146 LFAGIGGFGVALESLG--GECVFCSEIDEVCRTVYALNFSTKNQHG---DIYEVRDRDFP 200
Query: 510 RIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
DL++GG PC S+ + GL + +LF R+L L K
Sbjct: 201 ---------SQLDLLVGGFPCQPF--SSLSEQPGLHCPKGNLFLQIVRVLKLSK 243
>gi|420484211|ref|ZP_14982837.1| modification methylase HaeIII [Helicobacter pylori Hp P-3]
gi|420514572|ref|ZP_15013043.1| modification methylase HaeIII [Helicobacter pylori Hp P-3b]
gi|393101078|gb|EJC01651.1| modification methylase HaeIII [Helicobacter pylori Hp P-3]
gi|393156718|gb|EJC56981.1| modification methylase HaeIII [Helicobacter pylori Hp P-3b]
Length = 327
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N+LSLF+G G ++ + G ++ V +E +++I ++ + N K T + D++
Sbjct: 1 MNLLSLFAGARGLDLGFEQAGFKI-----VVANEYDKSITPTY--RLNHKNTQLLEKDIK 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
L + I + D +IGG PC + S + G++ LFY+Y R+L +K
Sbjct: 54 NLQTSEINFSV------DGIIGGPPCQ--SWSEAGNLKGIDDARGQLFYEYLRLLKELK 104
>gi|315639354|ref|ZP_07894516.1| DNA (cytosine-5-)-methyltransferase [Campylobacter upsaliensis
JV21]
gi|315480680|gb|EFU71322.1| DNA (cytosine-5-)-methyltransferase [Campylobacter upsaliensis
JV21]
Length = 320
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 16/114 (14%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
+V+SLFSG GG ++ + G + V +++++ S+ + G I D+
Sbjct: 4 SVISLFSGCGGLDLGFIKAGFEV-----VFANDIDKEACESYEKNI---GKHILCKDIYT 55
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
LD ++++ NA DL+IGG PC +N +RD L +SL+ +Y R+L
Sbjct: 56 LD---VKEIPNA----DLLIGGFPCLGFTIANGKNRD-LNSHYNSLYLEYARVL 101
>gi|416406066|ref|ZP_11688038.1| Type II modification methyltransferase HpaII [Crocosphaera watsonii
WH 0003]
gi|357261153|gb|EHJ10455.1| Type II modification methyltransferase HpaII [Crocosphaera watsonii
WH 0003]
Length = 420
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 22/123 (17%)
Query: 445 INVLSLFSGIGGA----EVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
IN + LF+GIGG E+A +L + + ++S SE++ ++ ++F
Sbjct: 2 INFIDLFAGIGGMRLGLELACKKLNIETRCILS---SEIDYKACETYA---------LNF 49
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
++ Q D I+++ F+ ++ G PC + + +H G +LF++ RILD
Sbjct: 50 DEIPQGDIKNIDKI----SSFNFILAGFPCQPFSYAGKHQ--GFGDTRGTLFFEVERILD 103
Query: 561 LVK 563
K
Sbjct: 104 KYK 106
>gi|384897195|ref|YP_005772623.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Lithuania75]
gi|317012300|gb|ADU82908.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Lithuania75]
Length = 348
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 477 SEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGS 536
++++++ + S+ Q N K T D+ QLD + + + D+++GG PC + +
Sbjct: 30 NDIDKDAILSY--QANHKKTQTILCDIMQLDCHNLPCV-----SIDILLGGPPCQSYSTL 82
Query: 537 NRHSRDGLEGKESSLFYDYFRILDLVK 563
+ D ++++LF +Y R+LDLVK
Sbjct: 83 GKRKMD----EKANLFKEYLRLLDLVK 105
>gi|200388503|ref|ZP_03215115.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|199605601|gb|EDZ04146.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
Length = 361
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 434 LSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQ 493
+S + E D I VLSLFSG GG + + G + V + D+ E + +++ T+
Sbjct: 1 MSSVFERENDNIRVLSLFSGCGGMDFGITSAGGDI--VFANDVVENACKTLGNYFPDTD- 57
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSL 551
I +D+ Q I +F D+V+GG PC ++AG+ + + D ++L
Sbjct: 58 ----IRHSDISQ---------IQSFPDVDIVVGGYPCQSFSMAGNRKPNND----DRTNL 100
Query: 552 FYDYFRILDLVK 563
+ + R+L+ V+
Sbjct: 101 YKHFLRVLETVR 112
>gi|443658594|ref|ZP_21132178.1| modification methylase HpaII [Microcystis aeruginosa DIANCHI905]
gi|159026722|emb|CAO89036.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332903|gb|ELS47486.1| modification methylase HpaII [Microcystis aeruginosa DIANCHI905]
Length = 455
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 17/114 (14%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +AL +LG R + SE+++ ++ + + I + + ++
Sbjct: 27 VDLFAGIGGFRIALEKLGGR-----CLGYSEIDKQAIQVYQQ------NFISYLNSDEIA 75
Query: 508 ANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ ++ N DL++GG PC ++AG R G E L++D +++
Sbjct: 76 FGDVSKISNLPDNLDLIVGGVPCQPWSVAGCLR----GFEDPRGKLWFDVIKLV 125
>gi|332523411|ref|ZP_08399663.1| modification methylase HpaII [Streptococcus porcinus str. Jelinkova
176]
gi|332314675|gb|EGJ27660.1| modification methylase HpaII [Streptococcus porcinus str. Jelinkova
176]
Length = 451
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ +S+ +G I+F D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGLTRQGHECIGFCEIDKFARKSYKAIYKTEGE-IEFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
Q+ Q+ G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 QVTDQDFRQLR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEVAR 102
>gi|32470131|ref|NP_863573.1| DNA-methyltransferase MKpn2kI [Klebsiella pneumoniae]
gi|386622391|ref|YP_006147220.1| type II DNA-methyltransferase [Escherichia coli O7:K1 str. CE10]
gi|462656|sp|P34879.1|MTS2_SHISO RecName: Full=Modification methylase SsoII; Short=M.SsoII; AltName:
Full=Cytosine-specific methyltransferase SsoII
gi|11559818|gb|AAG38101.1|AF300473_2 DNA-methyltransferase MKpn2kI [Klebsiella pneumoniae]
gi|294244|gb|AAA98279.1| C5-cytosine methylase [Plasmid P4]
gi|349741575|gb|AEQ15936.1| type II DNA-methyltransferase [Escherichia coli O7:K1 str. CE10]
Length = 379
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 21/123 (17%)
Query: 441 YPDGIN----VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGT 496
YP+ N ++ LF+GIGG RLG N V+V + S W++ QK
Sbjct: 64 YPNNENGRYRMIDLFAGIGGT-----RLGFHQTNAVNV--------VFSSEWDKFAQKTY 110
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
++ D D +I++ ++++GG PC +A S + G +LF+D
Sbjct: 111 HANYGDFPDGDITKIDE--KDIPDHEILVGGFPC--VAFSQAGLKKGFNDTRGTLFFDIA 166
Query: 557 RIL 559
RI+
Sbjct: 167 RII 169
>gi|335032436|ref|ZP_08525831.1| modification methylase HhaI domain protein [Streptococcus anginosus
SK52 = DSM 20563]
gi|333766956|gb|EGL44228.1| modification methylase HhaI domain protein [Streptococcus anginosus
SK52 = DSM 20563]
Length = 116
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 23/124 (18%)
Query: 442 PDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
P+ N+ + FSG+GG E LG N V + R +E N T +D
Sbjct: 10 PEKYNIAAFFSGVGGIE-----LGFEQTNEFRVVYANEFDKYARRTYE-LNYPDTFLDSR 63
Query: 502 DV-----QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
D+ +++ A R+ D+V+GG PC A S R GL+ LF++ F
Sbjct: 64 DIHAVKPEEIPAERV----------DVVMGGFPCQ--AFSIASYRKGLDDDRGDLFFELF 111
Query: 557 RILD 560
R+++
Sbjct: 112 RMIE 115
>gi|339300446|ref|ZP_08649598.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
agalactiae ATCC 13813]
gi|319746106|gb|EFV98380.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
agalactiae ATCC 13813]
Length = 458
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ +S+ +G I+F D++
Sbjct: 4 MKFLDLFAGIGG-----FRLGLTNQGHECIGFCEIDKFARKSYKAIYKTEGE-IEFHDIR 57
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
Q+ Q+ G D++ GG PC + + R R G E +LF++ R + ++
Sbjct: 58 QVTDQDFRQLR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIARAVKQIQ 111
>gi|209809294|ref|YP_002264832.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio
salmonicida LFI1238]
gi|208010856|emb|CAQ81257.1| putative C-5 cytosine-specific DNA methylase [Aliivibrio
salmonicida LFI1238]
Length = 387
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LF+G GG ++ H GV + V +++ + N + + ++K + D+
Sbjct: 3 VKAIDLFAGAGGFTLSAHNAGVEV--VAAIEFDKAAANTYKKNFILKDKKPIKLLNEDIN 60
Query: 505 QLDANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+D + + +N G DL++GG PC + ++R + G+ ++L YF +
Sbjct: 61 LVDPTGLRESLNLKAGELDLILGGPPCQGFS-THRINNAGVNDPRNALLLRYFEFV 115
>gi|319638577|ref|ZP_07993339.1| modification methylase NgoFVII [Neisseria mucosa C102]
gi|317400326|gb|EFV80985.1| modification methylase NgoFVII [Neisseria mucosa C102]
Length = 374
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQK--GTLIDFADVQ 504
+LSLFSG GG ++ H+ G + V + D S W ++ +K G +I D++
Sbjct: 18 ILSLFSGCGGLDLGFHQAG--YETVWANDFSH--------WACESFRKNIGDVIVEGDIE 67
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
Q+D N D+++GG PC + S + GLEG+ +L+ + R ++ K
Sbjct: 68 QIDPND-----PTIPDCDIILGGFPCQDF--SMIWKQPGLEGERGNLYKSFLRFVNAKK 119
>gi|265751237|ref|ZP_06087300.1| DNA-cytosine methyltransferase [Bacteroides sp. 3_1_33FAA]
gi|270294602|ref|ZP_06200804.1| DNA-cytosine methyltransferase [Bacteroides sp. D20]
gi|263238133|gb|EEZ23583.1| DNA-cytosine methyltransferase [Bacteroides sp. 3_1_33FAA]
gi|270276069|gb|EFA21929.1| DNA-cytosine methyltransferase [Bacteroides sp. D20]
Length = 335
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 21/118 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIV---RSWWEQTNQKGTLIDFA 501
+ ++SLFSG GG ++ H+ G R +V +E + I R+ + + N LI+
Sbjct: 1 MELISLFSGAGGLDLGFHKAGFR-----TVTANEFDAKICPTFRANFPEVN----LIE-G 50
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D++ + + I +IGG PC + S S G+E LFY+Y RIL
Sbjct: 51 DIRDIPSCEFPDNITG------IIGGPPCQSW--SEAGSLKGIEDARGQLFYEYIRIL 100
>gi|1657420|gb|AAC45971.1| DNA cytosine methyltransferase M.SenPI [Salmonella enterica subsp.
enterica serovar Enteritidis]
Length = 379
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 21/123 (17%)
Query: 441 YPDGIN----VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGT 496
YP+ N ++ LF+GIGG RLG N V+V + S W++ QK
Sbjct: 64 YPNNENGRYRMIDLFAGIGGT-----RLGFHQTNAVNV--------VFSSEWDKFAQKTY 110
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
++ D D +I++ ++++GG PC +A S + G +LF+D
Sbjct: 111 HANYGDFPDGDITKIDE--KDIPDHEILVGGFPC--VAFSQAGLKKGFNDTRGTLFFDIA 166
Query: 557 RIL 559
RI+
Sbjct: 167 RII 169
>gi|443662730|ref|ZP_21133000.1| modification methylase HpaII [Microcystis aeruginosa DIANCHI905]
gi|159027151|emb|CAO86782.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|443332022|gb|ELS46652.1| modification methylase HpaII [Microcystis aeruginosa DIANCHI905]
Length = 347
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 17/112 (15%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +AL LG + V S +I ++ + + + G L D D+++L+
Sbjct: 5 IDLFAGIGGFRIALENLGCQC--VFSSEIDPHSQKVYLANY------GHLPDNQDIRKLE 56
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
A + D++ GG PC + + R + G E +LF++ RIL
Sbjct: 57 AKTVPDH-------DILCGGFPCQAFSIAGR--KHGFEDARGTLFFEVARIL 99
>gi|429736802|ref|ZP_19270683.1| hypothetical protein HMPREF9163_01557, partial [Selenomonas sp.
oral taxon 138 str. F0429]
gi|429154091|gb|EKX96844.1| hypothetical protein HMPREF9163_01557, partial [Selenomonas sp.
oral taxon 138 str. F0429]
Length = 149
Score = 44.3 bits (103), Expect = 0.19, Method: Composition-based stats.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 17/111 (15%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF G GG + G+ K SEV +R T + ++ D+ Q+
Sbjct: 6 SLFDGSGGFTLGAVFAGIEPKWA-----SEVEPFPIRV---TTKRLPSVKHLGDIHQIRG 57
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ IE + D++ GSPC NL+ + R R+GL G+ES LF++ RI+
Sbjct: 58 DEIELV-------DIITFGSPCTNLSIAGR--REGLHGQESILFFEAVRIV 99
>gi|424780747|ref|ZP_18207617.1| Modification methylase [Catellicoccus marimammalium M35/04/3]
gi|422842672|gb|EKU27121.1| Modification methylase [Catellicoccus marimammalium M35/04/3]
Length = 360
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 67/136 (49%), Gaps = 23/136 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVN--------RNI------VRSWWEQ 490
+ + ++FSGIG E AL RL + K V + D E++ +NI +++ +E+
Sbjct: 2 LKLATVFSGIGAIEWALKRLNIDHKIVFACDNGEIDLDFENIDFKNISNKAEYIQNLYER 61
Query: 491 TNQ----KGTLIDFADVQQLDANRIEQMINAF---GGFDLVIGGSPCNNLAGSNRHSRDG 543
+ + K T + ++ + + I+ + G DL +GGSPC + S + G
Sbjct: 62 SRKTNFVKKTYMANYNIDNDNFLYDVRFIDGYQYRGQVDLFVGGSPCQSF--SIMGYQKG 119
Query: 544 LEGKESSLFYDYFRIL 559
L+ +LFYD+ R++
Sbjct: 120 LDDTRGTLFYDFARLV 135
>gi|227485932|ref|ZP_03916248.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC
51172]
gi|227235977|gb|EEI85992.1| DNA (cytosine-5-)-methyltransferase [Anaerococcus lactolyticus ATCC
51172]
Length = 358
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 15/116 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I + SLFSG+GG E L + V + SE++R +S+ + + D+
Sbjct: 5 IKIASLFSGVGGFEEGLRLAKIDFDLVFA---SEIDRFAQKSYSSNFDTDNL---YGDIT 58
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+++ I DL++ G PC + + + + R G E +LFYD RIL+
Sbjct: 59 KINEKNIPDH-------DLLLAGFPCQSFSIAGK--RKGFEDTRGTLFYDVARILN 105
>gi|403219369|emb|CCJ27729.1| cytosine-specific methyltransferase [Enterococcus faecium]
Length = 451
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ ++ + E+++ S+ N +G I++ D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGMELQGHECLGFCEIDKFARTSYKAMFNTEGE-IEYHDIK 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
++ + Q G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 EVTDHDFRQFR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|373118031|ref|ZP_09532169.1| hypothetical protein HMPREF0995_03005 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371667758|gb|EHO32875.1| hypothetical protein HMPREF0995_03005 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 241
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + SLF GIGG +A R G+ K + + +I + + KG D+
Sbjct: 3 LTMGSLFDGIGGFPLAAERYGI--KTLWASEIEPFPMKVTERRFPGMAHKG------DIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+L+ + + D++ GGSPC +L S +R GL G S LF + RI+
Sbjct: 55 KLNGRLLLPV-------DIICGGSPCQDL--SVAGARAGLSGARSGLFMEQIRII 100
>gi|297618103|ref|YP_003703262.1| DNA-cytosine methyltransferase [Syntrophothermus lipocalidus DSM
12680]
gi|297145940|gb|ADI02697.1| DNA-cytosine methyltransferase [Syntrophothermus lipocalidus DSM
12680]
Length = 388
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEV-----NRNIVRSWWEQTNQKGTLID 499
+ +S+FSG GG ++ + G + +D NR + + + + + ++
Sbjct: 5 LYAISIFSGAGGFDLGIEAAGFETRLCTDIDYHSCRTLRSNRRLGKETGKHSFLQNAVVL 64
Query: 500 FADVQQLDANRIEQMINA-FGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
D+++L+ I + G LVIGG PC + + R R G++ +L +D+ R+
Sbjct: 65 QRDIRKLNTKDILRAARLDRGKVSLVIGGPPCQSFSVFGR--RKGMDDPRGTLLWDFIRV 122
Query: 559 LDLVK 563
+ V+
Sbjct: 123 IREVQ 127
>gi|323512819|gb|ADX88273.1| putative DNA-methyltransferase, type II restriction-modification
system (Enterobacteria phage RB16) [Vibrio phage
ICP1_2006_D]
gi|323513047|gb|ADX88500.1| putative DNA-methyltransferase, type II restriction-modification
system (Enterobacteria phage RB16) [Vibrio phage
ICP1_2006_C]
Length = 332
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 20/127 (15%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+NVLSLF G+ +AL R G+++ N + SE+++N ++ Q N ++Q
Sbjct: 1 MNVLSLFDGMACCRIALERAGIQVGNYYA---SEIDKNAIKV--AQANWPD------NIQ 49
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
D + ++ + DLV GG PC ++AG +D + LF+ +LD++
Sbjct: 50 LGDVTKWQEWGIDWASIDLVTGGFPCQAWSIAGKQLGDKD----ERGMLFWT---MLDIM 102
Query: 563 KNMMQRN 569
K + + N
Sbjct: 103 KRVREYN 109
>gi|384512754|ref|YP_005707847.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis OG1RF]
gi|430359983|ref|ZP_19426027.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis OG1X]
gi|430371445|ref|ZP_19429388.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis M7]
gi|327534643|gb|AEA93477.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis OG1RF]
gi|429513123|gb|ELA02715.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis OG1X]
gi|429515101|gb|ELA04628.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis M7]
Length = 334
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ M + E+++ +S+ KG I+ D+
Sbjct: 1 MEFLDLFAGIGG-----FRLGMEMAGHHCIGFCEIDKYARKSYQAIHQTKGE-IELHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + I + G D++ GG PC + + + R G +LF++ R +++
Sbjct: 55 SVS----NEFIQSIGHTDILCGGFPCQAFSIAGK--RQGFADTRGTLFFEIARFTAILR 107
>gi|422343902|ref|ZP_16424829.1| hypothetical protein HMPREF9432_00889 [Selenomonas noxia F0398]
gi|355377999|gb|EHG25198.1| hypothetical protein HMPREF9432_00889 [Selenomonas noxia F0398]
Length = 535
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 17/119 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + SLF G GG + G+ K VD + T + ++ D+
Sbjct: 2 MTLGSLFDGSGGFTLGGILAGIEPKWASEVDPFPIRVT--------TKRLPSVKHLGDIH 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ + IE + D++ GSPC NL+ + R R+GL G+ES LF++ RI+ ++
Sbjct: 54 RIHGDEIEPV-------DIITFGSPCTNLSIAGR--REGLHGQESILFFEAIRIVQEMR 103
>gi|339300627|ref|ZP_08649768.1| type II DNA modification methyltransferase [Streptococcus
agalactiae ATCC 13813]
gi|319745928|gb|EFV98213.1| type II DNA modification methyltransferase [Streptococcus
agalactiae ATCC 13813]
Length = 454
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ +S+ +G I+F D++
Sbjct: 4 MKFLDLFAGIGG-----FRLGLTNQGHECIGFCEIDKFARKSYKAIYETEGE-IEFHDIR 57
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDY--------- 555
Q+ +Q+ G D++ GG PC + + R R G E +LF++
Sbjct: 58 QVTDQDFKQLR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIARAAKQIQP 112
Query: 556 -FRILDLVKNMMQRN 569
F L+ VK ++ N
Sbjct: 113 RFLFLENVKGLLSHN 127
>gi|386338842|ref|YP_006035011.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
gi|334281478|dbj|BAK29052.1| DNA (cytosine-5-)-methyltransferase [Streptococcus gallolyticus
subsp. gallolyticus ATCC 43143]
Length = 394
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 14/121 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
++ L LF+GIGG + L RLG +D R+ ++ ++F D+
Sbjct: 1 MDFLDLFAGIGGFRMGLERLGHHCVGFCEID------KFARASYKAIYHTEGEVEFHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
++ R E+ G DL+ GG PC ++AG R D G +LF++ R +
Sbjct: 55 KV---RSEEWRQFRGKVDLICGGFPCQAFSIAGKRRGFLDETRG---TLFFEIARAAKEI 108
Query: 563 K 563
K
Sbjct: 109 K 109
>gi|329767389|ref|ZP_08258914.1| hypothetical protein HMPREF0428_00611 [Gemella haemolysans M341]
gi|328836078|gb|EGF85769.1| hypothetical protein HMPREF0428_00611 [Gemella haemolysans M341]
Length = 144
Score = 43.9 bits (102), Expect = 0.21, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 12/117 (10%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V+ LFSG+GG G + V +EV+ +I S+ ++ + K +I+ D+ +L
Sbjct: 5 VIDLFSGVGGLSKGFFDSGFEI-----VLANEVDYSIANSY-KKNHPKVKMIN-EDISKL 57
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
D I+ + N + D+++GG PC S + R ++ + LF +F ++ +V+
Sbjct: 58 D---IDDVFNEYKNIDVIVGGPPCQGF--SQKGKRKIMDDPHNYLFKYFFEVVSVVR 109
>gi|424846779|ref|ZP_18271372.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium R501]
gi|424985690|ref|ZP_18398152.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium ERV69]
gi|424988835|ref|ZP_18401134.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium ERV38]
gi|424992832|ref|ZP_18404865.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium ERV26]
gi|402919648|gb|EJX40229.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium R501]
gi|402965255|gb|EJX81982.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium ERV69]
gi|402970754|gb|EJX87068.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium ERV38]
gi|402971459|gb|EJX87729.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium ERV26]
Length = 645
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + SLF G GG LG + + + SE+ +R T + + + DV
Sbjct: 6 LTLGSLFDGSGG-----FPLGGLISGITPIWASEIEPFPIRV---TTKRLPFMKHYGDVS 57
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+++ +E + D++ GSPC +++ + R R+GL+G SSLFY+ RI+
Sbjct: 58 KMNGADVEPV-------DIITFGSPCQDMSIAGR--REGLDGSRSSLFYEAVRIV 103
>gi|425440571|ref|ZP_18820869.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9717]
gi|389718951|emb|CCH97155.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9717]
Length = 347
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 17/112 (15%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +AL LG + V S +I ++ + + + G L D D+++L+
Sbjct: 5 IDLFAGIGGFRIALENLGCQC--VFSSEIDPHSQKVYLANY------GHLPDNQDIRKLE 56
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
A + D++ GG PC + + R + G E +LF++ RIL
Sbjct: 57 AKTVPDH-------DILCGGFPCQAFSIAGR--KHGFEDARGTLFFEVARIL 99
>gi|350413800|ref|XP_003490117.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Bombus
impatiens]
Length = 753
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS--LFYD 554
++ +VQ + +I+++ DL+IGGSPCN+L+ +N +R GL + + LF++
Sbjct: 514 IVHLGNVQDITKEKIQEI----APIDLLIGGSPCNDLSLAN-PARLGLYDPKGTGILFFE 568
Query: 555 YFRILDLVKNM 565
Y RI DL+K +
Sbjct: 569 YCRIKDLLKEV 579
>gi|242024278|ref|XP_002432555.1| Modification methylase HaeIII, putative [Pediculus humanus
corporis]
gi|212518015|gb|EEB19817.1| Modification methylase HaeIII, putative [Pediculus humanus
corporis]
Length = 267
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 18/101 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+NV+ L+SGIGG AL G+ K V +VDI N + + N TL+ ++Q
Sbjct: 1 MNVIELYSGIGGMHFALKESGIDYKVVKAVDI-----NTTANEVYKLNFPKTLLLGKNIQ 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLE 545
L + F G D+++ PC H+R+GL+
Sbjct: 56 SLQ-------LEDFNGIDMILMSPPC------QPHTRNGLK 83
>gi|378835572|ref|YP_005204848.1| cytosine-specific DNA methyltransferase [Mycoplasma hyorhinis
GDL-1]
gi|367460357|gb|AEX13880.1| cytosine-specific DNA methyltransferase [Mycoplasma hyorhinis
GDL-1]
Length = 413
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 36/211 (17%)
Query: 368 QKFVMDECRKWNLVWVGRN-KLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQ 426
QKF+ E K +L+ +N K L+ + L + K + I +
Sbjct: 17 QKFIRKEIAKKSLISTKQNNKCLILDSHYQDWKLSYKKEASSNKKIGK------------ 64
Query: 427 VDTVAYHLSVLKEM---------YPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDIS 477
++ + VLKEM Y +G + LFSG GG L G + + SV+I
Sbjct: 65 IEEKVQFIDVLKEMNKLDGWNSNYKNGYKFIDLFSGAGGLSCDLVMAG--FEPIASVEIM 122
Query: 478 EVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFG--GFDLVIGGSPCNNLA- 534
++ +K LI+ D++ D E++ N F DL++GG PC +
Sbjct: 123 PDAVETYVYNFQNRKKKEELIETRDIR--DVKVKEELYNKFKDTDIDLIVGGFPCQGFSM 180
Query: 535 GSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
NR D +SL Y +L++VKN+
Sbjct: 181 AGNRVVDDP----RNSL---YLEMLEIVKNL 204
>gi|153008840|ref|YP_001370055.1| DNA-cytosine methyltransferase [Ochrobactrum anthropi ATCC 49188]
gi|151560728|gb|ABS14226.1| DNA-cytosine methyltransferase [Ochrobactrum anthropi ATCC 49188]
Length = 414
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 434 LSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQ 493
+S + M +G NV+S F+G GG+ G R+ + + + E R + +
Sbjct: 71 MSDVSAMPWNGYNVISTFAGCGGSSTGYRMAGFRV--LFASEFIEAARET----YLANAR 124
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDGLEGKESS-- 550
GT++D D++Q+ A+ I G D+ G PC + + + + + + K+ S
Sbjct: 125 PGTIVDGRDIRQVTADEILAATGLKPGELDVFDGSPPCASFSTAGKREKAWGQVKKYSDS 184
Query: 551 ------LFYDYFRILDLVK 563
LF++Y R+L +K
Sbjct: 185 EQRVDDLFFEYARLLRQLK 203
>gi|170719133|ref|YP_001784281.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336]
gi|168827262|gb|ACA32633.1| DNA-cytosine methyltransferase [Haemophilus somnus 2336]
Length = 408
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 52/123 (42%), Gaps = 26/123 (21%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE-------VNRNIVRSWWEQTNQKGTL 497
I + + FSGIG E A RL + V + DI N ++ W
Sbjct: 34 IRLATTFSGIGAIEQAFKRLELNHCIVFAGDIDPHVKKSYLANYDLSEEHWH-------- 85
Query: 498 IDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
+D+ DA + D+++GGSPC A S R GLE +LFYD+ R
Sbjct: 86 ---SDITTFDAIPYRDQV------DILVGGSPCQ--AFSMVGKRHGLEDTRGTLFYDFAR 134
Query: 558 ILD 560
+++
Sbjct: 135 VVN 137
>gi|363890141|ref|ZP_09317485.1| hypothetical protein HMPREF9628_01927 [Eubacteriaceae bacterium
CM5]
gi|361965977|gb|EHL18930.1| hypothetical protein HMPREF9628_01927 [Eubacteriaceae bacterium
CM5]
Length = 465
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 387 KLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGIN 446
+L + P E E L+GFP N+T +RT RY++LGNS+ V V + LK+ + +
Sbjct: 268 RLRRISPLEAERLMGFPDNYTNIKKSTRTTRYQALGNSWSVPVVRWIGERLKKYANERLE 327
Query: 447 VLS 449
L+
Sbjct: 328 FLN 330
>gi|423302278|ref|ZP_17280301.1| DNA (cytosine-5-)-methyltransferase [Bacteroides finegoldii
CL09T03C10]
gi|408471369|gb|EKJ89901.1| DNA (cytosine-5-)-methyltransferase [Bacteroides finegoldii
CL09T03C10]
Length = 261
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLFSGIG E+A +G +N+ +I++ R+ + ++ T+ +AD+ D
Sbjct: 7 SLFSGIGAPELASEWMG--WENLFHCEINDFCRSFLEKRFKSTS-------YADITTTDF 57
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNR---HSRDGLEGKESSLFYDYFRILDLVK 563
N G D++ GG PC + + + + + GLEG + L++ +R +D ++
Sbjct: 58 NIWR------GRVDILTGGFPCQDASKAKQTGGRGQLGLEGHRTGLWWHMYRAIDEIR 109
>gi|404378161|ref|ZP_10983259.1| modification methylase NgoPII [Simonsiella muelleri ATCC 29453]
gi|294484031|gb|EFG31714.1| modification methylase NgoPII [Simonsiella muelleri ATCC 29453]
Length = 331
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 19/117 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSG GG ++ R G + D + + ++ + K LI+ D++
Sbjct: 1 MKVISLFSGCGGLDLGFERAGFEIPVANEYD------KTIWATYKANHPKTQLIE-GDIR 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
+ Q IN D +IGG PC + AG+ R G++ LF+DY RIL
Sbjct: 54 HI------QEINFPDEIDGIIGGPPCQSWSEAGALR----GIDDARGQLFFDYIRIL 100
>gi|42783651|ref|NP_980898.1| DNA-cytosine methyltransferase [Bacillus cereus ATCC 10987]
gi|42739580|gb|AAS43506.1| DNA-cytosine methyltransferase family protein [Bacillus cereus ATCC
10987]
Length = 362
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTN-QKGTLIDFADV 503
+N +S F+G GG ++ +H+ G ++ VSV++ V +R+ N +G ++ +
Sbjct: 1 MNCISFFAGAGGLDMGIHKAGFDVR--VSVELEPVYCETLRTNHPNWNVVEGDIMTYTPE 58
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNR 538
Q L+ +++ G DL+IGGSPC + + + +
Sbjct: 59 QVLEQADLQE-----GEVDLMIGGSPCQSFSTAGK 88
>gi|425434653|ref|ZP_18815118.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9432]
gi|389675873|emb|CCH95075.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9432]
Length = 456
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 21/129 (16%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTN 492
HL + Y + LF+GIGG +AL +LG R + SE+++ ++ + +
Sbjct: 16 HLVITHPQY----RFVDLFAGIGGFRIALEKLGGR-----CLGYSEIDKQAIQVYQQ--- 63
Query: 493 QKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESS 550
I + + ++ + ++ N DL++GG PC ++AG R G +
Sbjct: 64 ---NFISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWSVAGCLR----GFDDPRGK 116
Query: 551 LFYDYFRIL 559
L++D +++
Sbjct: 117 LWFDVIKLV 125
>gi|422729221|ref|ZP_16785625.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0012]
gi|315150308|gb|EFT94324.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0012]
Length = 334
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ M + E+++ +S+ KG I+ D+
Sbjct: 1 MEFLDLFAGIGG-----FRLGMEMAGHHCIGFCEIDKYARKSYQAIHQTKGE-IELHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + I + G D++ GG PC + + + R G +LF++ R +++
Sbjct: 55 SVS----NEFIRSIGHTDILCGGFPCQAFSIAGK--RQGFADTRGTLFFEIARFTAILR 107
>gi|269122950|ref|YP_003305527.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
gi|268314276|gb|ACZ00650.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
Length = 328
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ + G + V +E ++ I ++ + N K LI D+
Sbjct: 1 MKIISLFSGAGGLDLGFKKAGFDI-----VAANEFDKTIWETY--EKNHKTHLIK-GDIC 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ ++ + D +IGG PC + S S G+E LFY Y RIL
Sbjct: 53 NIHSSMFPEC-------DGIIGGPPCQSW--SEAGSLKGIEDPRGQLFYQYIRIL 98
>gi|223932228|ref|ZP_03624232.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591]
gi|223899209|gb|EEF65566.1| DNA-cytosine methyltransferase [Streptococcus suis 89/1591]
Length = 451
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + V E+++ S+ N +G I++ D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESQGHKCVGFCEIDKFARTSYKAMFNTEGE-IEYHDIK 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
++ + Q G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 EVTDHDFRQFR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|385858452|ref|YP_005904963.1| cytosine specific DNA methyltransferase [Mycoplasma hyorhinis MCLD]
gi|330723541|gb|AEC45911.1| cytosine specific DNA methyltransferase [Mycoplasma hyorhinis MCLD]
Length = 416
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 87/211 (41%), Gaps = 36/211 (17%)
Query: 368 QKFVMDECRKWNLVWVGRN-KLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQ 426
QKF+ E K +L+ +N K L+ + L + K + I +
Sbjct: 17 QKFIRKEIAKKSLISTKQNNKCLILDSHYQDWKLSYKKEASSNKKIGK------------ 64
Query: 427 VDTVAYHLSVLKEM---------YPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDIS 477
++ + VLKEM Y +G + LFSG GG L G + + SV+I
Sbjct: 65 IEEKVQFIDVLKEMNKLDGWNSNYKNGYKFIDLFSGAGGLSCDLVMAG--FEPIASVEIM 122
Query: 478 EVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAF--GGFDLVIGGSPCNNLA- 534
++ +K LI+ D++ D E++ N F DL++GG PC +
Sbjct: 123 PDAVETYVYNFQNRKKKEELIETRDIR--DVKVKEELYNKFKDTDIDLIVGGFPCQGFSM 180
Query: 535 GSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
NR D +SL Y +L++VKN+
Sbjct: 181 AGNRVVDDP----RNSL---YLEMLEIVKNL 204
>gi|326204903|ref|ZP_08194756.1| DNA-cytosine methyltransferase [Clostridium papyrosolvens DSM 2782]
gi|325984952|gb|EGD45795.1| DNA-cytosine methyltransferase [Clostridium papyrosolvens DSM 2782]
Length = 569
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I V SLF GIGG +A R G V + +I + + + Q ++ D+
Sbjct: 5 ITVGSLFDGIGGFPMAGIRQG--FIPVWASEIEAFPIAVTKLRFPQ------MLHVGDIT 56
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+L + Q+ D+V GGSPC +L+ + + R GL+G+ S LF + RI+
Sbjct: 57 KLKGETLPQV-------DVVCGGSPCQDLSVAGK--RAGLKGERSGLFMEQIRII 102
>gi|62946466|ref|YP_227670.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
gi|17134568|dbj|BAB77127.1| site-specific DNA-methyltransferase [Nostoc sp. PCC 7120]
Length = 253
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 19/118 (16%)
Query: 446 NVLSLFSGIGGA---EVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD 502
++LSLFSGIGG +A L + + V+IS +++ +R QT +D
Sbjct: 3 SILSLFSGIGGLCHHGIAAAGLSHKFQVKQFVEISPYSQSRLRHEQPQTP------IHSD 56
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+ +R G FD+V GG PC SN +R GL+ S+L+ + FRI++
Sbjct: 57 ITTYHCHR--------GQFDIVAGGLPCQGT--SNAGNRQGLDDPRSALWAEQFRIIE 104
>gi|357238287|ref|ZP_09125624.1| DNA (cytosine-5-)-methyltransferase [Streptococcus ictaluri 707-05]
gi|356753010|gb|EHI70131.1| DNA (cytosine-5-)-methyltransferase [Streptococcus ictaluri 707-05]
Length = 496
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 23/114 (20%)
Query: 449 SLFSGIGGAEVALHRLGVR---MKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
SLF G GG +A ++G+ V I +NI ++ D+ +
Sbjct: 8 SLFDGSGGFPLAGLQVGIEPLWASEVEPYTILITRKNIP-----------SMKHLGDITK 56
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
L IE + D++ GSPC +++ + + RDGL GK SSLFY+ RI+
Sbjct: 57 LSGYEIEPV-------DIITFGSPCQDMSIAGK--RDGLNGKSSSLFYEAIRII 101
>gi|425461326|ref|ZP_18840806.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9808]
gi|389825852|emb|CCI24105.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 9808]
Length = 456
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 60/129 (46%), Gaps = 21/129 (16%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTN 492
HL + Y + LF+GIGG +AL +LG R + SE+++ ++ + +
Sbjct: 16 HLVITHPQY----RFVDLFAGIGGFRIALEKLGGR-----CLGYSEIDKQAIQVYQQ--- 63
Query: 493 QKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESS 550
I + + ++ + ++ N DL++GG PC ++AG R G +
Sbjct: 64 ---NFISYLNSDEIAFGDVSKISNLPDNLDLIVGGVPCQPWSVAGCLR----GFDDPRGK 116
Query: 551 LFYDYFRIL 559
L++D +++
Sbjct: 117 LWFDVIKLV 125
>gi|417844498|ref|ZP_12490540.1| modification methylase EcoRII [Haemophilus haemolyticus M21639]
gi|341956695|gb|EGT83114.1| modification methylase EcoRII [Haemophilus haemolyticus M21639]
Length = 306
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 15/115 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I ++ LF+GIGG + + NV V SE+++ ++++ +TN K + F D+
Sbjct: 3 IKIVDLFAGIGGIRLGFEQA---FNNVDCVFSSEIDKYAIQTY--KTNFKDEFV-FGDIT 56
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
Q+D + D+++ G PC S + G +LF+D RIL
Sbjct: 57 QIDEKLVPDH-------DILLAGFPCQPF--SQAGLKKGFSDTRGTLFFDIERIL 102
>gi|423068658|ref|ZP_17057446.1| hypothetical protein HMPREF9682_00667 [Streptococcus intermedius
F0395]
gi|355365958|gb|EHG13677.1| hypothetical protein HMPREF9682_00667 [Streptococcus intermedius
F0395]
Length = 452
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 21/135 (15%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ +S+ + +G I F D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGLTRQGHECMGFCEIDKFARKSYQAIYDTEGE-ITFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDY--------- 555
Q+ Q+ G D++ GG PC + + R R G E +LF++
Sbjct: 55 QVRDQDFRQLR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIARATKQIQP 109
Query: 556 -FRILDLVKNMMQRN 569
F L+ VK ++ N
Sbjct: 110 RFLFLENVKGLLSHN 124
>gi|444308413|ref|ZP_21144059.1| DNA-cytosine methyltransferase [Ochrobactrum intermedium M86]
gi|443488245|gb|ELT51001.1| DNA-cytosine methyltransferase [Ochrobactrum intermedium M86]
Length = 496
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 434 LSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQ 493
+S + M +G NV+S F+G GG+ G R+ + + + E R ++ +
Sbjct: 71 MSEVAAMPWNGFNVISTFAGCGGSSTGYRMAGFRV--LFASEFIEAARET----YQANAR 124
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDGLEGKESS-- 550
GT++D D++Q+ A I G D++ G PC + + + + + + K+ S
Sbjct: 125 PGTIVDGRDIRQVSAEDILAATGLKPGELDVLDGSPPCASFSTAGKREKAWGKVKKYSDS 184
Query: 551 ------LFYDYFRIL 559
LF++Y R++
Sbjct: 185 EQRVDDLFFEYARLV 199
>gi|315656923|ref|ZP_07909810.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
gi|315492878|gb|EFU82482.1| DNA (cytosine-5-)-methyltransferase [Mobiluncus curtisii subsp.
holmesii ATCC 35242]
Length = 503
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 27/124 (21%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVD-----ISEVNRNIVRSWWEQTNQKGTLID 499
+ + SLF G GG +A +G++ VD +++ N VR
Sbjct: 4 LTLGSLFDGSGGFPLAAKMVGIKPMWASEVDPFAIRVTKKNLPEVR-------------H 50
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ LD R++ + D++ GSPC +L+ + + R G++G SSLFY RI+
Sbjct: 51 VGDINLLDGGRLQPV-------DVITFGSPCQDLSIAGK--RSGIDGSRSSLFYQAVRII 101
Query: 560 DLVK 563
+ ++
Sbjct: 102 EEMR 105
>gi|304389869|ref|ZP_07371828.1| possible DNA-cytosine methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
gi|304327045|gb|EFL94284.1| possible DNA-cytosine methyltransferase [Mobiluncus curtisii subsp.
curtisii ATCC 35241]
Length = 503
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 27/124 (21%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVD-----ISEVNRNIVRSWWEQTNQKGTLID 499
+ + SLF G GG +A +G++ VD +++ N VR
Sbjct: 4 LTLGSLFDGSGGFPLAAKMVGIKPMWASEVDPFAFRVTKKNLPEVR-------------H 50
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ LD R++ + D++ GSPC +L+ + + R G++G SSLFY RI+
Sbjct: 51 VGDINLLDGGRLQPV-------DVITFGSPCQDLSIAGK--RSGIDGSRSSLFYQAVRII 101
Query: 560 DLVK 563
+ ++
Sbjct: 102 EEMR 105
>gi|402558610|ref|YP_006607738.1| site-specific DNA-methyltransferase [Bacillus thuringiensis HD-771]
gi|402560235|ref|YP_006602959.1| site-specific DNA-methyltransferase [Bacillus thuringiensis HD-771]
gi|401788887|gb|AFQ14926.1| site-specific DNA-methyltransferase [Bacillus thuringiensis HD-771]
gi|401793996|gb|AFQ20030.1| site-specific DNA-methyltransferase [Bacillus thuringiensis HD-771]
Length = 246
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 15/121 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ +L LFSGIGG +A G+ + +I N+ ++ W T+ F+D++
Sbjct: 1 MKMLDLFSGIGGISLAADWAGI--ETAAFCEIEPFNQKVLNKHWP------TVPIFSDIR 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
L +E+ G +V GG PC ++AG + D + L+ + FRI++ +
Sbjct: 53 TLTKKSLEESGVDVGAISIVAGGFPCQPYSVAGKQKGKED-----DRDLWPEMFRIIEEI 107
Query: 563 K 563
+
Sbjct: 108 R 108
>gi|386581935|ref|YP_006078339.1| C-5 cytosine-specific DNA methylase [Streptococcus suis SS12]
gi|353734081|gb|AER15091.1| C-5 cytosine-specific DNA methylase [Streptococcus suis SS12]
Length = 451
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + V E+++ S+ N +G I++ D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESQGHKCVGFCEIDKFARTSYKAMFNTEGE-IEYHDIK 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
++ + Q G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 EVTDHDFRQFR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|225571452|ref|ZP_03780448.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM
15053]
gi|225159928|gb|EEG72547.1| hypothetical protein CLOHYLEM_07550 [Clostridium hylemonae DSM
15053]
Length = 377
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 30/149 (20%)
Query: 420 SLGNSFQVDTVAYHLSVLKEM-YPDGINVLSLFSGIGG----AEVALHRLGVRMKNVVSV 474
+LG S VD + LS ++ + YP I + LF GIGG ++ A +L + K V S
Sbjct: 50 ALGVS--VDKIFLDLSSVETIAYPKPIRYIDLFCGIGGFRYASQYAFDKLDLEGKCVFSS 107
Query: 475 DISEVNRNIVRSWWEQTNQKGTLID--FADVQQLDANRIEQMINAFGGFDLVIGGSPCN- 531
DI + + Q + + + D+ +++A+ I FD++ GG PC
Sbjct: 108 DIDK---------YAQVSYEANFGERPMGDITKIEASEIPD-------FDILFGGFPCQA 151
Query: 532 -NLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ G + D +G +LF+D RI+
Sbjct: 152 FSICGLQKGFADNTKG---TLFFDIARII 177
>gi|422301674|ref|ZP_16389039.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9806]
gi|389789264|emb|CCI14672.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9806]
Length = 347
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 17/112 (15%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+G+GG +AL LG + V S +I ++ + + + G L D D+++L+
Sbjct: 5 IDLFAGVGGFRIALENLGCQC--VFSSEIDPHSQKVYLANY------GHLPDNQDIRKLE 56
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
A + D++ GG PC + + R + G E +LF++ RIL
Sbjct: 57 AKTVPDH-------DILCGGFPCQAFSIAGR--KHGFEDARGTLFFEVARIL 99
>gi|452945335|gb|EME50857.1| DNA (cytosine-5-)-methyltransferase [Rhodococcus ruber BKS 20-38]
Length = 387
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 20/115 (17%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ- 504
N++ LF+GIGG E+ L G R + + +D + ++R+ FADV
Sbjct: 6 NMVGLFAGIGGLELGLAEHGWRTELLCEIDAGA--QAVLRA------------RFADVAL 51
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D R+ + A ++V G PC +L+ + R + G+ G S L + FR++
Sbjct: 52 HTDVTRLRSLPQA---TEIVTAGFPCQDLSQAGRTA--GITGSRSGLVDEVFRLV 101
>gi|423552903|ref|ZP_17529230.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus ISP3191]
gi|401185516|gb|EJQ92610.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus ISP3191]
Length = 402
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 62/117 (52%), Gaps = 8/117 (6%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+NV+ LF+G+GG V L R G N V + E ++ ++ + G DF +
Sbjct: 2 LNVIELFAGVGGFRVGLERSG--GFNFVWANQWEPSKKAQDAYNCYVSHFGE-SDFHSNE 58
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRD-GLEGKESSLFYDYFRILD 560
D N++++ F+L++GG PC + + + S + G++GK+ LF+D RI++
Sbjct: 59 --DINKVDE--TTLPEFELLVGGFPCQDYSVARSLSGELGIQGKKGVLFWDIIRIVE 111
>gi|420469222|ref|ZP_14967945.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-10]
gi|393084466|gb|EJB85157.1| cytosine-specific methyltransferase [Helicobacter pylori Hp H-10]
Length = 318
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 23/120 (19%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSW---WEQTNQKGTLIDFA 501
+ + SGIGG RLG+ ++ V +E+N +R++ ++ T+ +F
Sbjct: 4 LTFMDFCSGIGGG-----RLGLERCHLKCVGHAEINHEALRTYELFFKDTH------NFG 52
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
D+ +++ N + GFD++I G PC A S R GLE + ++ Y RIL +
Sbjct: 53 DLMRINPNDLP-------GFDVLISGFPCQ--AFSINGKRKGLEDERGTIIYGLIRILKV 103
>gi|257870038|ref|ZP_05649691.1| DNA methylase [Enterococcus gallinarum EG2]
gi|257804202|gb|EEV33024.1| DNA methylase [Enterococcus gallinarum EG2]
Length = 401
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 15/113 (13%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V + FSG+GG E+ + G + + V + +E ++N ++ E Q T +D D+ ++
Sbjct: 15 VAAFFSGVGGIELGFEQTG-KFRVVYA---NEFDKNAQITYAENYPQ--TPLDKRDIHEV 68
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ + DL++GG PC A S R G E LF++ RI+
Sbjct: 69 DSKEVPVS-------DLIVGGFPCQ--AFSIAGYRKGFEDDRGDLFFELLRII 112
>gi|206975132|ref|ZP_03236046.1| modification methylase HaeIII [Bacillus cereus H3081.97]
gi|206746553|gb|EDZ57946.1| modification methylase HaeIII [Bacillus cereus H3081.97]
Length = 352
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V+ LF+G+GG + + G + V +E + +I ++ + N + T + D+ +L
Sbjct: 5 VIDLFAGVGGLSLGFEQEGFEV-----VLANEYDESIANAY--KKNHRNTKMIVGDIAEL 57
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
D + G D++IGG PC S + R + + LF + ++ L+K M
Sbjct: 58 DIKNV--FCPYVGKIDVIIGGPPCQGF--SQKGQRKTINDDRNFLFKYFVSVVGLIKPM 112
>gi|123441984|ref|YP_001005967.1| prophage encoded DNA modification methylase [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|122088945|emb|CAL11755.1| prophage encoded DNA modification methylase [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 452
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 14/128 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVD---ISEVNRNIV---RSWWEQTNQKGTLI 498
+N + LFSG GG + L + G+ + V + + RN++ + + ++K +L
Sbjct: 1 MNFIDLFSGCGGFSLGLLKAGLTGRLAVEKNQDAFETLKRNLIEGNKFSYSWASEKISL- 59
Query: 499 DFADVQQLDANRIEQMINAFGG---FDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDY 555
D D+ L ++ ++ G DLV+GG PC + + R R+ L+ + + L YDY
Sbjct: 60 DNHDIHTL-LDKYSSYLSELGDGREIDLVVGGPPCQGFSSAGR--RNPLDPR-NQLAYDY 115
Query: 556 FRILDLVK 563
+++ LVK
Sbjct: 116 LKVVSLVK 123
>gi|4877791|gb|AAD31433.1| DNA methyltransferase 3 beta 4 [Homo sapiens]
Length = 109
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 515 INAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
I +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 1 IEEWGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 48
>gi|380010964|ref|XP_003689585.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like, partial
[Apis florea]
Length = 536
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 513 QMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS--LFYDYFRILDLVKNM 565
+ I DL+IGGSPCN+L+ +N +R GL + + LF++Y RIL LVK +
Sbjct: 306 KTIKEIAPIDLLIGGSPCNDLSLAN-PARLGLHDPKGTGILFFEYRRILKLVKKL 359
>gi|293371782|ref|ZP_06618192.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CMC 3f]
gi|292633234|gb|EFF51805.1| C-5 cytosine-specific DNA methylase [Bacteroides ovatus SD CMC 3f]
Length = 161
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 20/117 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLF+G GG ++ R G + V +E +++I +++ + N T++D +
Sbjct: 1 MKIVSLFAGAGGLDLGFERAGFDI-----VWANEYDKDIWKTY--EKNHSNTILDKRSIT 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
+ I + D +IGG PC + AG+ R G+ K LF+D+ RIL
Sbjct: 54 DIPTTDIPEC-------DGIIGGPPCQSWSEAGALR----GINDKRGQLFFDFIRIL 99
>gi|434383171|ref|YP_006704954.1| DNA-cytosine methyltransferase [Brachyspira pilosicoli WesB]
gi|404431820|emb|CCG57866.1| DNA-cytosine methyltransferase [Brachyspira pilosicoli WesB]
Length = 330
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 20/117 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
++++SLF+G GG ++ G + ++ +E ++ I ++ + N T +D ++
Sbjct: 5 LSIISLFTGAGGLDLGFKNAGFK-----TIWANEYDKTIWDTF--KYNFPETRLDTRNIT 57
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
++D+ I NA G +IGG PC + AG+ R G+ LFYDY R+L
Sbjct: 58 EIDSKDIP---NASG----LIGGPPCQSWSEAGAGR----GINDDRGKLFYDYIRVL 103
>gi|291514217|emb|CBK63427.1| DNA-methyltransferase (dcm) [Alistipes shahii WAL 8301]
Length = 296
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 27/122 (22%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSW---WEQTNQKGTLIDFA 501
+N+L LFSGIGG + L + G V SE++R+ V ++ + G++ D
Sbjct: 1 MNLLELFSGIGGFSLGLRQAGFTFDKVY---FSEIDRHAVANFKHNFPHAQHVGSVCD-- 55
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLF------YDY 555
+ IE+ D++ GSPC N + + GL+G ESSL DY
Sbjct: 56 ----ITGTSIERP-------DIITFGSPCQNFSAAGNGL--GLQGAESSLIRYAIKAIDY 102
Query: 556 FR 557
FR
Sbjct: 103 FR 104
>gi|197302809|ref|ZP_03167861.1| hypothetical protein RUMLAC_01538 [Ruminococcus lactaris ATCC
29176]
gi|197298046|gb|EDY32594.1| modification methylase HhaI [Ruminococcus lactaris ATCC 29176]
Length = 333
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
G + + LF+G+GG +AL LG + + + W QK +F D+
Sbjct: 11 GYSFIDLFAGLGGFRIALESLGAKC--------------VYSNEWNVPVQKVYADNFGDI 56
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ D ++++ N D++ G PC + S + G E +LF+D RI+
Sbjct: 57 PEGDITQVDE--NTIPDHDILCAGFPCQAFSISGKQR--GFEDSRGTLFFDVARIV 108
>gi|357054725|ref|ZP_09115806.1| hypothetical protein HMPREF9467_02778 [Clostridium clostridioforme
2_1_49FAA]
gi|355384029|gb|EHG31100.1| hypothetical protein HMPREF9467_02778 [Clostridium clostridioforme
2_1_49FAA]
Length = 640
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 17/120 (14%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF GIGG +A G+ V + +I + R + G D+ +LD
Sbjct: 3 SLFDGIGGFPLAATHYGI--TPVWASEIEAFPMEVTRIRFPDMTHVG------DITKLDG 54
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
++ + D++ GGSPC +L+ + R GL G+ S LF + RI+ +++ +R
Sbjct: 55 RKLPPV-------DVICGGSPCQDLSVAGH--RRGLAGERSGLFMEQVRIVKEMRDADER 105
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 41/92 (44%), Gaps = 15/92 (16%)
Query: 367 VQKFVMDECRKWNLVWV--------GRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRY 418
V MD+ + N +V RN + L P E E L GFP T S + RY
Sbjct: 547 VGTLCMDDGKGINNQYVDQDKCVVENRNLIRRLTPLECERLQGFPDGWTDIPSASDSARY 606
Query: 419 KSLGNS-------FQVDTVAYHLSVLKEMYPD 443
K+LGNS F + +AY L ++E PD
Sbjct: 607 KALGNSVAIPCVDFVLRGIAYFLRRIREECPD 638
>gi|332704951|ref|ZP_08425037.1| DNA-methyltransferase (dcm) [Moorea producens 3L]
gi|332356303|gb|EGJ35757.1| DNA-methyltransferase (dcm) [Moorea producens 3L]
Length = 360
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 15/118 (12%)
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD 502
D N + LF+G GG + H G ++ + +D S V + R + TN + +D
Sbjct: 3 DSKNAIDLFAGAGGLSLGFHMAGWQITTAIEIDKSAV--STYRENFPSTN-----VIRSD 55
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGL-EGKESSLFYDYFRIL 559
V+ +D F G DLV+G PC + N+ L K L ++ R +
Sbjct: 56 VRAID-------FTQFQGIDLVVGSPPCQPFSVPNQERNKQLSRAKPKDLVPEFIRAV 106
>gi|240145320|ref|ZP_04743921.1| DNA (cytosine-5-)-methyltransferase [Roseburia intestinalis L1-82]
gi|257202585|gb|EEV00870.1| DNA (cytosine-5-)-methyltransferase [Roseburia intestinalis L1-82]
Length = 504
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 17/120 (14%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF GIGG +A R G+R V + +I + + + + G D+ +L
Sbjct: 7 SLFDGIGGFPLAAKRNGIR--PVWASEIEKFPMAVTMHRFPEMKHMG------DITKLHG 58
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
+ + D++ GGSPC +L+ + R R GL G S LF + RI+ ++ +R
Sbjct: 59 ENLPVV-------DVIAGGSPCQDLSIAGR--RAGLAGMRSGLFLEQVRIIKEMRRQEER 109
>gi|291544930|emb|CBL18039.1| Site-specific DNA methylase [Ruminococcus champanellensis 18P13]
Length = 362
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VLSLF GI +AL R G+ ++ + +I + + + + G + D D
Sbjct: 1 MKVLSLFDGISCGMLALQRAGIPVECYDAFEIDKYAVTVSKRNFPVIVHHGNVYD-GDFT 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
Q F G+DL++GGSPC + + + G+ LF +Y R L+
Sbjct: 60 Q------------FKGYDLLLGGSPCTYWSIAKKDREIDCNGEGFRLFQEYVRALE 103
>gi|166368121|ref|YP_001660394.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa
NIES-843]
gi|166090494|dbj|BAG05202.1| C-5 cytosine-specific DNA-methylase [Microcystis aeruginosa
NIES-843]
Length = 347
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 17/112 (15%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+G+GG +AL LG + V S +I ++ + + + G L D D+++L+
Sbjct: 5 IDLFAGVGGFRIALENLGCQC--VFSSEIDPHSQKVYLANY------GHLPDNQDIRKLE 56
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
A + D++ GG PC + + R + G E +LF++ RIL
Sbjct: 57 AKTVPDH-------DILCGGFPCQAFSIAGR--KHGFEDARGTLFFEVARIL 99
>gi|350272701|ref|YP_004884009.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
gi|348597543|dbj|BAL01504.1| cytosine-specific methyltransferase [Oscillibacter valericigenes
Sjm18-20]
Length = 384
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 21/126 (16%)
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD 502
+ INV+SLFSG+GG + LG + + S+++ N ++ + D +
Sbjct: 6 NNINVVSLFSGLGGLD-----LGFVWEGFNIIWASDISSNATETYKLNFGHEAIRGDILN 60
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
V +N D+VIGG PC + + + + D + G+ FR LD+V
Sbjct: 61 VS----------LNDIPKADVVIGGPPCQSFSLVGKRNPDDIRGQL------VFRYLDVV 104
Query: 563 KNMMQR 568
K++M +
Sbjct: 105 KHLMPK 110
>gi|228469860|ref|ZP_04054799.1| modification methylase HaeIII [Porphyromonas uenonis 60-3]
gi|228308495|gb|EEK17283.1| modification methylase HaeIII [Porphyromonas uenonis 60-3]
Length = 359
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ H+ G ++ +E ++ I ++ +F DV
Sbjct: 3 MTLISLFSGAGGMDLGFHKAG-----FTTILANEYDKTICPTFKH---------NFPDVP 48
Query: 505 QL--DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
L D +I + + D +IGG PC + + + + G+E LF+DY RIL
Sbjct: 49 LLEGDIRKIPERLFP-RHIDGIIGGPPCQSWSEAG--ALKGIEDARGQLFFDYIRIL 102
>gi|386748451|ref|YP_006221659.1| type II R-M system methyltransferase [Helicobacter cetorum MIT
99-5656]
gi|384554693|gb|AFI06449.1| type II R-M system methyltransferase [Helicobacter cetorum MIT
99-5656]
Length = 319
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 23/120 (19%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSW---WEQTNQKGTLIDFA 501
+ + SGIGG RLG+ N+ V +E+NR +R++ ++ TN +F
Sbjct: 2 LTFIDFCSGIGGG-----RLGLEQCNLKCVGHAEINREALRTYELFFKDTN------NFG 50
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
D+ Q++ N + FD++I G PC A S R G + ++ Y IL +
Sbjct: 51 DLMQVNPNDLPH-------FDVLISGFPCQ--AFSINGKRKGFDDTRGTIIYGLIDILKI 101
>gi|425437022|ref|ZP_18817451.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9432]
gi|389678124|emb|CCH93007.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9432]
Length = 347
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 17/112 (15%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+G+GG +AL LG + V S +I ++ + + + G L D D+++L+
Sbjct: 5 IDLFAGVGGFRIALENLGCQC--VFSSEIDPHSQKVYLANY------GHLPDNQDIRKLE 56
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
A + D++ GG PC + + R + G E +LF++ RIL
Sbjct: 57 AKTVPDH-------DILCGGFPCQAFSIAGR--KHGFEDARGTLFFEVARIL 99
>gi|225375653|ref|ZP_03752874.1| hypothetical protein ROSEINA2194_01278 [Roseburia inulinivorans DSM
16841]
gi|225212510|gb|EEG94864.1| hypothetical protein ROSEINA2194_01278 [Roseburia inulinivorans DSM
16841]
Length = 473
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 17/120 (14%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF GIGG +A R G+R V + +I + + + + G D+ +L
Sbjct: 7 SLFDGIGGFPLAAKRNGIR--PVWASEIEKFPMAVTMYRFPEMKHMG------DITKLHG 58
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
+ + D++ GGSPC +L+ + R R GL G S LF + RI+ ++ +R
Sbjct: 59 ENLPVV-------DVIAGGSPCQDLSIAGR--RAGLAGMRSGLFLEQVRIIKEMRRQEER 109
>gi|269122857|ref|YP_003305434.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
gi|268314183|gb|ACZ00557.1| DNA-cytosine methyltransferase [Streptobacillus moniliformis DSM
12112]
Length = 329
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
G+ + LF+G+GG ++L G + + W++ QK ++F D+
Sbjct: 11 GLKFIDLFAGLGGFRLSLESFGAEC--------------VYSNEWDKNAQKVYQMNFGDM 56
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ D I++ N D++ G PC + S + G E +LF+D RI+
Sbjct: 57 PEGDITLIDE--NNIPDHDILCAGFPCQAFSISGKQK--GFEDNRGTLFFDVARII 108
>gi|373120361|ref|ZP_09534426.1| hypothetical protein HMPREF0995_05262 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371658469|gb|EHO23749.1| hypothetical protein HMPREF0995_05262 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 498
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF GIGG +A R G+ + V + +I + R + +++ D+ +L+
Sbjct: 6 SLFDGIGGFPLAAVRNGI--EPVWASEIEAFPIEVTRKRFP------SILHVGDITKLNG 57
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
+ + D++ GGSPC +L S +R GL G+ S LF + R++ +++ +R
Sbjct: 58 AELPPV-------DIITGGSPCQDL--SVAGARAGLAGERSGLFMEQIRVVKEMRDADER 108
>gi|386748677|ref|YP_006221885.1| type II DNA modification (methyltransferase) [Helicobacter cetorum
MIT 99-5656]
gi|384554919|gb|AFI06675.1| type II DNA modification (methyltransferase) [Helicobacter cetorum
MIT 99-5656]
Length = 349
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V +F G GG N + ++++++ + S+ Q N K T D+ QL
Sbjct: 5 VADIFCGAGGLSYGFST----HPNFELIWANDIDKDAILSY--QANHKNTQTILCDITQL 58
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + + D+++GG PC + + + D ++++LF +Y R+LDLVK
Sbjct: 59 NCQNLPRT-----QIDILLGGPPCQSYSTLGKRQMD----EKANLFKEYLRVLDLVK 106
>gi|417321064|ref|ZP_12107604.1| putative C-5 cytosine-specific DNA methylase [Vibrio
parahaemolyticus 10329]
gi|328471744|gb|EGF42621.1| putative C-5 cytosine-specific DNA methylase [Vibrio
parahaemolyticus 10329]
Length = 392
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 4/110 (3%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LFSG GG +A H LG+ + + +D ++ + E+ QK ++++ D+ +D
Sbjct: 6 IDLFSGAGGFSLAAHNLGLEIVAAIELD-KTASQTYQSNLVERLGQKTSILN-EDILSID 63
Query: 508 ANRIEQMINA-FGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
+ + + G +++GG PC + S+R G++ + L YF
Sbjct: 64 PEELRKSLGINIGELSIILGGPPCQGFS-SHRIKDAGVDDPRNKLLLRYF 112
>gi|291537886|emb|CBL10997.1| DNA-methyltransferase (dcm) [Roseburia intestinalis XB6B4]
Length = 473
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 17/120 (14%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF GIGG +A R G+R V + +I + + + + G D+ +L
Sbjct: 7 SLFDGIGGFPLAAKRNGIR--PVWASEIEKFPMAVTMYRFPEMKHMG------DITKLHG 58
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
+ + D++ GGSPC +L+ + R R GL G S LF + RI+ ++ +R
Sbjct: 59 ENLPVV-------DVIAGGSPCQDLSIAGR--RAGLAGMRSGLFLEQVRIIKEMRRQEER 109
>gi|387782130|ref|YP_005792843.1| type II m5C methylase [Helicobacter pylori 51]
gi|261837889|gb|ACX97655.1| type II m5C methylase [Helicobacter pylori 51]
Length = 348
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 17/121 (14%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVS-VDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
V +F G GG G M + ++++ + + S+ Q N K T D+ Q
Sbjct: 4 VADIFCGAGGLSY-----GFSMHPYFELIWANDIDNDAILSY--QANHKETQTILCDIMQ 56
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
LD + + + D+++GG PC + + + D ++++LF +Y R+LDLVK
Sbjct: 57 LDCHNLPCV-----SIDILLGGPPCQSYSTLGKRKMD----EKANLFKEYLRLLDLVKPK 107
Query: 566 M 566
M
Sbjct: 108 M 108
>gi|433656500|ref|YP_007273879.1| DNA-cytosine methyltransferase( ) [Vibrio parahaemolyticus BB22OP]
gi|432507188|gb|AGB08705.1| DNA-cytosine methyltransferase( ) [Vibrio parahaemolyticus BB22OP]
Length = 392
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
+ LFSG GG +A H LG+ + + +D ++ + E+ QK ++++ D+ +
Sbjct: 5 AIDLFSGAGGFSLAAHNLGLEIVAAIELD-KTASQTYQSNLVERLGQKTSILN-EDILSI 62
Query: 507 DANRIEQMINA-FGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
D + + + G +++GG PC + S+R G++ + L YF
Sbjct: 63 DPEELRKSLGINIGELSIILGGPPCQGFS-SHRIKDAGVDDPRNKLLLRYF 112
>gi|433591426|ref|YP_007280922.1| DNA-methyltransferase Dcm [Natrinema pellirubrum DSM 15624]
gi|433306206|gb|AGB32018.1| DNA-methyltransferase Dcm [Natrinema pellirubrum DSM 15624]
Length = 751
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 13/122 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LF+G GG L G M+ ++D +E R + + + +D++
Sbjct: 320 LTAIDLFAGAGGFSCGLAHSGFDMQ--WAIDFNEYATATYRLNHPEIPHRNIVC--SDIR 375
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSR-------DGLEGKESSLFYDYFR 557
+ DA EQ+ + G DLV+GG PC +L+ + SR L+ + +SL+ +Y
Sbjct: 376 ETDA--AEQIRSTVGEPDLVVGGPPCQSLSLAGYRSRLAADDDYSTLDDERTSLYEEYLD 433
Query: 558 IL 559
I+
Sbjct: 434 II 435
>gi|457094700|gb|EMG25213.1| DNA-cytosine methyltransferase [Streptococcus parauberis KRS-02083]
Length = 596
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ +S+ +G I+F D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGLTNQGHECIGFCEIDKFARKSYKAIYKTEGE-IEFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
Q+ Q G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 QVTDQDFRQFR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|336413283|ref|ZP_08593635.1| hypothetical protein HMPREF1017_00743 [Bacteroides ovatus
3_8_47FAA]
gi|335938327|gb|EGN00217.1| hypothetical protein HMPREF1017_00743 [Bacteroides ovatus
3_8_47FAA]
Length = 261
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 18/118 (15%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLFSGIG E+A +G +N+ +I++ R+ + ++ T+ +AD+ D
Sbjct: 7 SLFSGIGAPELASEGMG--WENLFHCEINDFCRSFLEKRFKSTS-------YADITTTDF 57
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNR---HSRDGLEGKESSLFYDYFRILDLVK 563
N G D+V GG PC + + + + + GLEG+ + L++ R +D ++
Sbjct: 58 NIWR------GRVDIVTGGFPCQDASKAKQTGGKGQLGLEGERTGLWWHMCRAVDEIR 109
>gi|340355639|ref|ZP_08678317.1| DNA (cytosine-5-)-methyltransferase [Sporosarcina newyorkensis
2681]
gi|339622197|gb|EGQ26726.1| DNA (cytosine-5-)-methyltransferase [Sporosarcina newyorkensis
2681]
Length = 491
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 17/111 (15%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF G GG +A + G+ K SEV +R T + + D+ ++
Sbjct: 8 SLFDGSGGFPLAGLQCGITPKWA-----SEVEPFPIRV---TTKRIPQMKHLGDISSING 59
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
IE + D++ GSPC +L+ + + R GL+GK+SSLFY R++
Sbjct: 60 AEIEPV-------DIITFGSPCTDLSIAGK--RAGLDGKQSSLFYQAIRVI 101
>gi|427720675|ref|YP_007068669.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
gi|427353111|gb|AFY35835.1| DNA-cytosine methyltransferase [Calothrix sp. PCC 7507]
Length = 657
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 16/124 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVD---ISEVNRNIVRSWWEQTNQKGTLIDFA 501
+ LSLFSG GG ++A H G ++ +V ++ + + +N + W +Q
Sbjct: 54 VKTLSLFSGGGGLDIAFHDSGFQIIQMVELENKYVQTLLKNSLPGKWLAGSQPIC----T 109
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRD--GLEGKESSLFYDYFRIL 559
D++ + ++ D VIGG PC + + R + G +LF +Y RIL
Sbjct: 110 DIRNYSPDPNLKV-------DFVIGGPPCQTFSAAGRRAAGVLGTTDARGTLFQEYVRIL 162
Query: 560 DLVK 563
+++
Sbjct: 163 KILQ 166
>gi|420398545|ref|ZP_14897758.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
gi|393015219|gb|EJB16390.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1962]
Length = 352
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVS-VDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
V +F G GG G M + ++++++ + S+ Q N K T D+ Q
Sbjct: 4 VADIFCGAGGLSY-----GFSMHPYFELIWANDIDKDAILSY--QANHKKTQTILCDIMQ 56
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
L+ + + + D+++GG PC + + + D ++++LF +Y R+LDLVK
Sbjct: 57 LNCHNLPCV-----SIDILLGGPPCQSYSTLGKRKMD----EKANLFKEYLRLLDLVKPK 107
Query: 566 M 566
M
Sbjct: 108 M 108
>gi|319956919|ref|YP_004168182.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM
16511]
gi|319419323|gb|ADV46433.1| DNA-cytosine methyltransferase [Nitratifractor salsuginis DSM
16511]
Length = 394
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + +LFSGIG E+A + + V S +I + R + + G + DV
Sbjct: 1 MKIATLFSGIGAPEMAARHIFPSHEIVFSCEIDKFARKSYAAIY------GEEPLYHDVH 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+ A I G DL++GGSPC + + + R G+ +L Y ++R++D
Sbjct: 55 NVPA------IFYQGHIDLLVGGSPCQSFSVAG--IRKGVNDPRGALIYQFYRVVD 102
>gi|315222617|ref|ZP_07864506.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
gi|315188303|gb|EFU22029.1| DNA (cytosine-5-)-methyltransferase [Streptococcus anginosus F0211]
Length = 348
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 436 VLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKG 495
+L+ Y +N++SLFSG GG ++ + G NVV+ + E ++ I ++ + + K
Sbjct: 2 ILRRKYK--MNLISLFSGAGGLDLGFEKAGF---NVVAAN--EYDKTIWETYEKNHDTKL 54
Query: 496 TLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDY 555
D + F D +IGG PC + S S G++ LFY Y
Sbjct: 55 IKGDICGIPS----------EMFPKCDGIIGGPPCQ--SWSEAGSLKGIDDPRGQLFYQY 102
Query: 556 FRIL 559
RIL
Sbjct: 103 IRIL 106
>gi|404379748|ref|ZP_10984801.1| modification methylase HphIA [Simonsiella muelleri ATCC 29453]
gi|404379752|ref|ZP_10984804.1| modification methylase HphIA [Simonsiella muelleri ATCC 29453]
gi|294483036|gb|EFG30723.1| modification methylase HphIA [Simonsiella muelleri ATCC 29453]
gi|404294551|gb|EJZ50161.1| modification methylase HphIA [Simonsiella muelleri ATCC 29453]
Length = 328
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 16/123 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LFSG GG + R G R ++SV++ + R+ + + + V
Sbjct: 3 LTYIDLFSGAGGFSLGFDRAGFR--QLLSVELEKTYCETYRTNFPKHH----------VL 50
Query: 505 QLDANRI--EQMINAFGG--FDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
Q D + E+++N G D+VIGG PC + + R + + LF ++ R++
Sbjct: 51 QTDLTTLSNEKILNELNGQAVDVVIGGPPCQGFSMAGNIGRTFTDDPRNHLFKEFVRVVS 110
Query: 561 LVK 563
+VK
Sbjct: 111 VVK 113
>gi|414159048|ref|ZP_11415340.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sp. F0441]
gi|410869031|gb|EKS16995.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sp. F0441]
Length = 315
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + E+++ S+ N KG I+ D+
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESAGHECIGFCEIDKFARASYRAIHNTKGE-IELHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ ++ + G D++ GG PC A S +R G E +LF++ R ++K
Sbjct: 55 AVS----DEFVRGIGRVDIICGGFPCQ--AFSIAGARRGFEDTRGTLFFEIARFASILK 107
>gi|403058608|ref|YP_006646825.1| Modification methylase FnuDI [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402805934|gb|AFR03572.1| Modification methylase FnuDI [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 361
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 434 LSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQ 493
+S + E D I VLSLFSG GG + + G + V + D+ E + +++ T+
Sbjct: 1 MSSVFERENDNIRVLSLFSGCGGMDFGITSAGGDI--VFANDVVENACKTLGNYFPDTD- 57
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSL 551
+ +D+ Q I +F D+V+GG PC ++AG+ + + D ++L
Sbjct: 58 ----VIHSDISQ---------IQSFPDVDIVVGGYPCQSFSMAGNRKPNND----DRTNL 100
Query: 552 FYDYFRILDLVK 563
+ + R+L+ V+
Sbjct: 101 YKHFLRVLETVR 112
>gi|427730822|ref|YP_007077059.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
gi|427366741|gb|AFY49462.1| DNA-methyltransferase Dcm [Nostoc sp. PCC 7524]
Length = 455
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 17/115 (14%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +AL +LG + + SE+++ ++ + K I + + +++
Sbjct: 28 VDLFAGIGGFRIALEKLGGQ-----CLGYSEIDKQAIQVY------KQNFISYLNQDEIE 76
Query: 508 ANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRILD 560
I ++ D+V+GG PC ++AG R G + L++D R+++
Sbjct: 77 LGDITKIPELPANIDIVVGGVPCQPWSVAGCLR----GFDDPRGKLWFDVIRLVN 127
>gi|288801979|ref|ZP_06407420.1| modification methylase HaeIII (Cytosine-specific methyltransferase
HaeIII) [Prevotella melaninogenica D18]
gi|288335414|gb|EFC73848.1| modification methylase HaeIII (Cytosine-specific methyltransferase
HaeIII) [Prevotella melaninogenica D18]
Length = 336
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 15/115 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG + H G R ++ +E ++ I ++ + N T + D+
Sbjct: 1 MRLISLFSGAGGLDKGFHNAGFR-----TIVANEFDKKICPTF--RANFPDTKLIEGDIH 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ ++ +N G +IGG PC + + + + G+E LFY+Y RIL
Sbjct: 54 DIPSDAFP--MNPVG----IIGGPPCQSWSEAG--TLKGIEDARGQLFYEYIRIL 100
>gi|429737286|ref|ZP_19271155.1| DNA (cytosine-5-)-methyltransferase [Selenomonas sp. oral taxon 138
str. F0429]
gi|429153032|gb|EKX95830.1| DNA (cytosine-5-)-methyltransferase [Selenomonas sp. oral taxon 138
str. F0429]
Length = 539
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 11/110 (10%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
+++ LF+G GG + + G RM N+V+ +E+N N +++ + K + DV
Sbjct: 8 SIIDLFAGAGGLSLGFRQTG-RM-NIVAA--AEINPNARKTYKRNFHVKQL---YTDVCT 60
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDY 555
+D ++ + G D+VIGG PC + +NR R L + L +Y
Sbjct: 61 IDYAELKASV---GQIDMVIGGPPCQGFSNANRQ-RTSLINMNNRLVKEY 106
>gi|145638078|ref|ZP_01793692.1| putative type II 5-cytosoine methyltransferase [Haemophilus
influenzae PittHH]
gi|145268726|gb|EDK08715.1| putative type II 5-cytosoine methyltransferase [Haemophilus
influenzae PittHH]
Length = 226
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 21/122 (17%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
M + V+SLFSG GG ++ + G + + ++ +++ V ++ E ++ L
Sbjct: 1 MMNKKLTVISLFSGAGGLDLGFKQAGFNL-----IWANDFDKDAVETYKENIGKECVL-- 53
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFR 557
D+ ++ ++ I NA D++IGG PC ++A + RH D + +SL+ +Y R
Sbjct: 54 -GDITKIPSSEIP---NA----DVMIGGFPCQGFSMANTKRHELD----ERNSLYLEYVR 101
Query: 558 IL 559
IL
Sbjct: 102 IL 103
>gi|332711623|ref|ZP_08431554.1| DNA-methyltransferase [Moorea producens 3L]
gi|332349601|gb|EGJ29210.1| DNA-methyltransferase [Moorea producens 3L]
Length = 427
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 18/146 (12%)
Query: 419 KSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE 478
K + +Q VLK P V+ LF+G GG + G+ K +V +D
Sbjct: 56 KRIQRKYQGLATGVEFRVLKSK-PTSFRVIELFAGCGGMALGFENAGLTTKLLVEIDKDC 114
Query: 479 VNR-NIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSN 537
VN + R WE + +DF + + D+V GG PC + +
Sbjct: 115 VNTLKLNRPSWEIIPEDIANVDFTNYKD--------------NVDIVAGGVPCQAFSYAG 160
Query: 538 RHSRDGLEGKESSLFYDYFRILDLVK 563
G + +LF+++ R + V+
Sbjct: 161 LGK--GFDDTRGTLFFEFARCVKEVQ 184
>gi|259046940|ref|ZP_05737341.1| modification methylase Sau3AI (cytosine-specificmethyltransferase
Sau3AI) [Granulicatella adiacens ATCC 49175]
gi|259036383|gb|EEW37638.1| modification methylase Sau3AI (cytosine-specificmethyltransferase
Sau3AI) [Granulicatella adiacens ATCC 49175]
Length = 451
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 66/139 (47%), Gaps = 20/139 (14%)
Query: 437 LKEMYPDGINVLSLFSGIGGAEVAL----HRLGVRMKNVVSVDISEVNRNIVRSW----- 487
+KE+ + V S+F G+GG V L +L + V + E +R ++
Sbjct: 3 MKEVIMSKLKVFSMFDGVGGFIVGLDEANRKLNKKFFQVTDTNQFEPSRKAQDAFEVGVY 62
Query: 488 -WEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNN--LAGSNRHSRDGL 544
+ + N D+ Q+ + ++M G ++++GG PC + +A S +H G+
Sbjct: 63 NYPKINHSN-----EDIMQVSSEYFDEM--KANGVNMIVGGFPCQDYSVARSKKHEM-GI 114
Query: 545 EGKESSLFYDYFRILDLVK 563
EGK+ LF++ R ++ +K
Sbjct: 115 EGKKGVLFWEIIRAVNHIK 133
>gi|325269501|ref|ZP_08136117.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
gi|324988120|gb|EGC20087.1| DNA (cytosine-5-)-methyltransferase [Prevotella multiformis DSM
16608]
Length = 388
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 441 YPD-GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE-------VNRNIVRSWWEQTN 492
YP+ I + + FSGIG E A RL + ++ V + DI N I W
Sbjct: 28 YPNRTIRLATSFSGIGAIEHAFKRLNLNVEIVFAGDIDANCKKAYFANYKISEEQWH--- 84
Query: 493 QKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESS 550
D+Q LDA + G DL +GG+PC ++ G R G + +
Sbjct: 85 --------TDIQNLDARPYK------GKVDLFVGGAPCQAFSIVGDQR----GFDDTRGT 126
Query: 551 LFYDYFRIL 559
LF ++ R++
Sbjct: 127 LFREFARVV 135
>gi|398876925|ref|ZP_10632075.1| DNA-methyltransferase Dcm [Pseudomonas sp. GM67]
gi|398203383|gb|EJM90205.1| DNA-methyltransferase Dcm [Pseudomonas sp. GM67]
Length = 501
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 41/108 (37%), Gaps = 1/108 (0%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
VL LFSG GG + G M+ V D + R+ ++ + ID
Sbjct: 21 VLDLFSGCGGISLGFESAGFEMRGSVEFD-PDAARSHGLNFHDGAEAHSQPIDITKTSPA 79
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYD 554
D + N FD+V+GG PC A R +E + +D
Sbjct: 80 DLCLKLNLGNVADAFDIVVGGPPCQAFARVGRSKLREIEEHPEAFMHD 127
>gi|385249008|ref|YP_005777227.1| Type II DNA modification enzyme [Helicobacter pylori F57]
gi|317181803|dbj|BAJ59587.1| Type II DNA modification enzyme [Helicobacter pylori F57]
Length = 351
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 477 SEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGS 536
++++++ + S+ Q N K T D+ QL+ + + + D+++GG PC + +
Sbjct: 30 NDIDKDAILSY--QANHKKTQTILCDIMQLNCHNLPCV-----SIDILLGGPPCQSYSTL 82
Query: 537 NRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
+ D ++++LF +Y R+LDLVK M
Sbjct: 83 GKRKMD----EKANLFKEYLRLLDLVKPKM 108
>gi|413915569|emb|CCM44165.1| DNA-cytosine methyltransferase [Staphylococcus xylosus]
Length = 359
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 13/120 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA-DV 503
+ VL LF G GG + G + + D EV + T T FA D+
Sbjct: 3 LKVLDLFCGAGGLSLGFQNAGFNIYGGIEWD--EV------ASLTHTKNFNTNYHFAGDI 54
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ I++ + D++IGG PC + +NR+ +D + + LFY+Y R +++++
Sbjct: 55 TEVSNETIKKELLQI---DVIIGGPPCQGFSSANRYLKDE-DDPRNKLFYEYLRFVNIIR 110
>gi|384887473|ref|YP_005761984.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
gi|261839303|gb|ACX99068.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori 52]
Length = 348
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVS-VDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
V +F G GG G M + ++++++ + S+ Q N K T D+ Q
Sbjct: 4 VADIFCGAGGLSY-----GFSMHPYFELIWANDIDKDAILSY--QANHKKTQTILCDIMQ 56
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
L+ + + + D+++GG PC + + + D ++++LF +Y R+LDLVK
Sbjct: 57 LNCHNLPCV-----SIDILLGGPPCQSYSTLGKRKMD----EKANLFKEYLRLLDLVKPK 107
Query: 566 M 566
M
Sbjct: 108 M 108
>gi|420406668|ref|ZP_14905838.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
gi|393023505|gb|EJB24619.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6311]
Length = 351
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVS-VDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
V +F G GG G M + ++++++ + S+ Q N K T D+ Q
Sbjct: 4 VADIFCGAGGLSY-----GFSMHPYFELIWANDIDKDAILSY--QANHKKTQTILCDIMQ 56
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
L+ + + + D+++GG PC + + + D ++++LF +Y R+LDLVK
Sbjct: 57 LNCHNLPCV-----SIDILLGGPPCQSYSTLGKRKMD----EKANLFKEYLRLLDLVKPK 107
Query: 566 M 566
M
Sbjct: 108 M 108
>gi|383449604|ref|YP_005356325.1| Type II modification methyltransferase HpaII [Flavobacterium
indicum GPTSA100-9]
gi|380501226|emb|CCG52268.1| Type II modification methyltransferase HpaII [Flavobacterium
indicum GPTSA100-9]
Length = 422
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 16/112 (14%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +A+ LG + + S W++ ++ +F + D
Sbjct: 100 IDLFAGIGGFRLAMQNLG--------------GKCVFTSEWDKDAKRTYKANFGERPFGD 145
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ E GFDL+ G PC + + + R G E +LF+D I+
Sbjct: 146 ITKEETKAFIPDGFDLLCAGFPCQAFSIAGK--RGGFEDTRGTLFFDVAEII 195
>gi|423068115|ref|ZP_17056903.1| modification methylase HaeIII [Streptococcus intermedius F0395]
gi|355367006|gb|EHG14719.1| modification methylase HaeIII [Streptococcus intermedius F0395]
Length = 274
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++SLFSG GG ++ + G NVV+ + E ++ I ++ + N LI D+
Sbjct: 1 MNLISLFSGAGGLDLGFEKAGF---NVVAAN--EYDKTIWETY--EKNHDTKLIK-GDIC 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ + F D +IGG PC + S S G++ LFY Y RIL
Sbjct: 53 GIPS-------EMFPECDGIIGGPPCQSW--SEAGSLKGIDDPRGQLFYQYIRIL 98
>gi|387143640|ref|YP_005732034.1| phage C-5 cytosine-specific DNA methylase [Staphylococcus aureus
subsp. aureus TW20]
gi|418954249|ref|ZP_13506221.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus aureus subsp.
aureus IS-189]
gi|269941524|emb|CBI49922.1| phage C-5 cytosine-specific DNA methylase [Staphylococcus aureus
subsp. aureus TW20]
gi|375373336|gb|EHS77021.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus aureus subsp.
aureus IS-189]
Length = 332
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 15/121 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VL LFSG+G ++L+ LG+ + V SE + + + + N+K + + DV+
Sbjct: 2 IKVLELFSGVGSFSISLNTLGIEHE---IVGFSETRKTATQLFCKLHNKKESE-NLGDVR 57
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKE--SSLFYDYFRILDLV 562
+ A ++ DL++ GSPC + + + GL+G + S+L ++ RI++
Sbjct: 58 NVSAKDLD--------VDLLVFGSPCQSFTRAGKQG-GGLKGSDTRSALMWEAVRIMEEC 108
Query: 563 K 563
K
Sbjct: 109 K 109
>gi|167772229|ref|ZP_02444282.1| hypothetical protein ANACOL_03604 [Anaerotruncus colihominis DSM
17241]
gi|167665332|gb|EDS09462.1| DNA (cytosine-5-)-methyltransferase [Anaerotruncus colihominis DSM
17241]
Length = 603
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF GIGG +A R G+ + V + +I + R + +++ D+ +L+
Sbjct: 6 SLFDGIGGFPLAAVRNGI--EPVWASEIEAFPIEVTRKRFP------SILHVGDITKLNG 57
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
+ + D++ GGSPC +L S +R GL G+ S LF + R++ +++ +R
Sbjct: 58 AELPPV-------DIITGGSPCQDL--SVAGARAGLAGERSGLFMEQIRVVKEMRDADER 108
>gi|419682527|ref|ZP_14211259.1| cytosine specific methyltransferase [Campylobacter jejuni subsp.
jejuni 1213]
gi|380661488|gb|EIB77384.1| cytosine specific methyltransferase [Campylobacter jejuni subsp.
jejuni 1213]
Length = 338
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDI-SEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
+ LF+G GG + L + G +V +D + + R W N+ D++Q+
Sbjct: 6 IELFAGAGGLAIGLEKSGFEHIGLVEIDKHASLTLKYNRPCWNVINE--------DIEQV 57
Query: 507 DANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+E N G DL+ GG PC + + + +R G+E ++FY Y + L
Sbjct: 58 VERNLEIEFNIKKGELDLLSGGPPCQSFSYAG--NRLGIEDSRGTMFYFYAKFL 109
>gi|386819506|ref|ZP_10106722.1| DNA-methyltransferase Dcm [Joostella marina DSM 19592]
gi|386424612|gb|EIJ38442.1| DNA-methyltransferase Dcm [Joostella marina DSM 19592]
Length = 424
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 23/156 (14%)
Query: 414 RTDRYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVS 473
R D K LG F + V +S E D NVL LF+G GG V + + G++
Sbjct: 47 RKDIEKLLGKLFD-EVVEEEVSNYVEPEKD-YNVLELFAGAGGLAVGMEKAGLK-----C 99
Query: 474 VDISEVNRNIVRSWWEQT---NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPC 530
V ++E+++ W QT N+ + D++ D + + + D+V GG PC
Sbjct: 100 VALNEIDK-----WACQTLRKNRPNWNVLEGDIKNFDFSEYKNSV------DVVTGGFPC 148
Query: 531 NNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
+ + + + GL +LFY++ R++ V ++
Sbjct: 149 QAFSYAGK--KLGLNDARGTLFYEFARVVKEVNPLI 182
>gi|365844153|ref|ZP_09385017.1| DNA (cytosine-5-)-methyltransferase [Flavonifractor plautii ATCC
29863]
gi|364566228|gb|EHM43926.1| DNA (cytosine-5-)-methyltransferase [Flavonifractor plautii ATCC
29863]
Length = 603
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 59/120 (49%), Gaps = 17/120 (14%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF GIGG +A R G+ + V + +I + R + +++ D+ +L+
Sbjct: 6 SLFDGIGGFPLAAVRNGI--EPVWASEIEAFPIEVTRKRFP------SMLHVGDITKLNG 57
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
+ + D++ GGSPC +L S +R GL G+ S LF + R++ +++ +R
Sbjct: 58 AELPPV-------DIITGGSPCQDL--SVAGARAGLAGERSGLFMEQIRVVKEMRDADER 108
>gi|299820316|gb|ADJ54326.1| C5-cytosine specific methylase [archaeon enrichment culture clone
1(2010)]
Length = 396
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VL L+SG+GG + + + +R K ++ + E+N+N V ++ ++ DV
Sbjct: 4 LKVLDLYSGLGGLSLGV-AIALRPKEIIGL---EINKNAVDTYNLNLSRYNAKAFRQDVL 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
Q G +DL+IGGSPC + +N + G++ LF R D+V
Sbjct: 60 QWQPE---------GHYDLIIGGSPCEPFSIANPRRK----GEKHPLFPTLKRFYDIV 104
>gi|409385548|ref|ZP_11238142.1| Modification methylase Rho11sI [Lactococcus raffinolactis 4877]
gi|399207040|emb|CCK19057.1| Modification methylase Rho11sI [Lactococcus raffinolactis 4877]
Length = 96
Score = 43.1 bits (100), Expect = 0.44, Method: Composition-based stats.
Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 16/108 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I +L LF GIG VAL LG+ +K S+D E+ V S+ I +D++
Sbjct: 3 IKILELFGGIGSPRVALRNLGIDIK---SIDYVEIYVKAVASY--------NAIFASDLK 51
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRH-SRDGLEGKESSL 551
+ I+ + D++I GSPC +++ + RH D G SSL
Sbjct: 52 YKTQSVIDWELKP----DILIHGSPCQDISIAGRHLGTDAGSGTRSSL 95
>gi|48243617|gb|AAT40769.1| putative DNA methylase [Haemophilus influenzae]
Length = 293
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 60/117 (51%), Gaps = 21/117 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSG GG ++ + G + + ++ +++ V ++ E ++ L D+
Sbjct: 5 LTVISLFSGAGGLDLGFKQAGFNL-----IWANDFDKDAVETYKENIGKECVL---GDIT 56
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ ++ I D++IGG PC ++A + RH D + +SL+ +Y RIL
Sbjct: 57 KIPSSEIPNA-------DVMIGGFPCQGFSMANTKRHELD----ERNSLYLEYVRIL 102
>gi|418280512|ref|ZP_12893360.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus aureus subsp.
aureus 21178]
gi|420233384|ref|ZP_14737996.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
NIH051668]
gi|365168390|gb|EHM59737.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus aureus subsp.
aureus 21178]
gi|394300169|gb|EJE43686.1| DNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
NIH051668]
Length = 332
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 15/121 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VL LFSG+G ++L+ LG+ + V SE + + + + N+K + + DV+
Sbjct: 2 IKVLELFSGVGSFSISLNTLGIEHE---IVGFSETRKTATQLFCKLHNKKESE-NLGDVR 57
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKE--SSLFYDYFRILDLV 562
+ A ++ DL++ GSPC + + + GL+G + S+L ++ RI++
Sbjct: 58 NVSAKDLD--------VDLLVFGSPCQSFTRAGKQG-GGLKGSDTRSALMWEAVRIMEEC 108
Query: 563 K 563
K
Sbjct: 109 K 109
>gi|386584129|ref|YP_006080532.1| DNA-cytosine methyltransferase [Streptococcus suis D9]
gi|353736275|gb|AER17284.1| DNA-cytosine methyltransferase [Streptococcus suis D9]
Length = 451
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ S+ N +G I++ D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGLESQGHKCLGFCEIDKFARTSYKAMFNTEGE-IEYHDIK 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
++ + Q G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 EVTDHDFRQFR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|292670760|ref|ZP_06604186.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292647381|gb|EFF65353.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 476
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 20/121 (16%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLF GIGG +A GV V + +I ++ + Q F D+ Q+D
Sbjct: 5 SLFDGIGGWLLAARHAGV--TPVWASEIEPFPCSVTARHFPNVKQ------FGDITQIDP 56
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMMQR 568
+ I+ + D++ GSPC +L+ + + R GL+G+ S LF ++LV+ M R
Sbjct: 57 DEIDPV-------DIICAGSPCQDLSIAGK--RKGLDGERSGLFRT---AVELVRRMRIR 104
Query: 569 N 569
Sbjct: 105 T 105
>gi|74136491|ref|NP_001028141.1| DNA (cytosine-5)-methyltransferase 1 [Monodelphis domestica]
gi|22023943|gb|AAM89258.1|AF527541_1 cytosine-5-methyltransferase [Monodelphis domestica]
Length = 1514
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 62/146 (42%), Gaps = 24/146 (16%)
Query: 439 EMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLI 498
E+ P + L +FSG GG H+ G+ + + ++++ E R N GT +
Sbjct: 1031 EVKPPKLRTLDVFSGCGGLSEGFHQAGIS-ETLWAIEMWEPAAQAFR-----LNNPGTTV 1084
Query: 499 DFADVQQL--------DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS 550
D L N + Q + G +++ GG PC +G NR + ++S
Sbjct: 1085 FTEDCNVLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNS 1144
Query: 551 L------FYDYFR----ILDLVKNMM 566
L + DY+R +L+ V+N +
Sbjct: 1145 LVVSFLSYCDYYRPRFFLLENVRNFV 1170
>gi|288906872|emb|CBJ21706.1| type II DNA modification methyltransferase [Streptococcus mitis B6]
Length = 380
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + E+++ S+ N KG I+ D+
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESAGHKCIGFCEIDKFARESYKAIHNTKGE-IELHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
+ ++ I G D++ GG PC ++AG+ R G E +LF++ R ++
Sbjct: 55 AVS----DESIRGIGSVDIICGGFPCQAFSIAGNRR----GFEDTRGTLFFEIARFASIL 106
Query: 563 K 563
+
Sbjct: 107 R 107
>gi|336392213|ref|ZP_08573612.1| cytosine specific DNA methyltransferase [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 349
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 12/117 (10%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
++ LFSG+GG + G NVV + E++ +I S+ Q N T + D+ +L
Sbjct: 4 IIDLFSGVGGLSIGFRNAGY---NVVLAN--EIDASIANSY--QKNHPETKMINEDITKL 56
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
D I + ++IGG PC S + R L + LF +F ++ VK
Sbjct: 57 D---IADTFAEYRDVGMIIGGPPCQGF--SQKGKRLSLRDPRNYLFRYFFDVVKFVK 108
>gi|260557494|ref|ZP_05829709.1| site-specific DNA-methyltransferase [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|193076851|gb|ABO11576.2| site-specific DNA-methyltransferase [Acinetobacter baumannii ATCC
17978]
gi|260409120|gb|EEX02423.1| site-specific DNA-methyltransferase [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|452951679|gb|EME57125.1| site-specific DNA-methyltransferase [Acinetobacter baumannii
MSP4-16]
Length = 304
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 17/122 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF---A 501
+N L+LF+G GG +A + LG R V +V+ ++ Q G L F +
Sbjct: 1 MNELALFAGAGGGVLASYLLGWR--TVCAVERDAYAAQVL----AQRQNDGILEAFPIWS 54
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
D+ D + ++ D++ GG PC +++ + + + G+EG+ S L+ + RI+
Sbjct: 55 DITTFDGKPWQGIV------DVISGGFPCQDISSAGKGA--GIEGERSGLWSEMARIIGE 106
Query: 562 VK 563
V+
Sbjct: 107 VR 108
>gi|154173655|ref|YP_001409100.1| cytosine-specific methyltransferase NlaX [Campylobacter curvus
525.92]
gi|112802981|gb|EAU00325.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Campylobacter
curvus 525.92]
Length = 352
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 24/126 (19%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
M + I + ++FSGIG AE A + + +I + R Q+ ID
Sbjct: 1 MASEKIALATIFSGIGSAEFAAREVFAEYDMAFACEIDKFAR--------QSYLANHAID 52
Query: 500 ----FADVQQLDANRIEQMINAFGGFDLVIGGSPCNN--LAGSNRHSRDGLEGKESSLFY 553
++++LDA + D++IGGSPC + LAG R G EG+ L Y
Sbjct: 53 EKHFHCNIKELDAKIYTDKV------DVLIGGSPCQDFSLAG----LRAGTEGERGELIY 102
Query: 554 DYFRIL 559
++ RI+
Sbjct: 103 EFVRIV 108
>gi|268680341|ref|YP_003304772.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM
6946]
gi|268618372|gb|ACZ12737.1| DNA-cytosine methyltransferase [Sulfurospirillum deleyianum DSM
6946]
Length = 335
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 59/119 (49%), Gaps = 24/119 (20%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWE--QTNQKGTLIDFAD 502
+N++SLFSG GG ++ + G + +V +E ++ I WE + N T +D
Sbjct: 1 MNIISLFSGAGGLDLGFEKAGFK-----TVWANEYDKEI----WETFEKNFPHTTLDRRS 51
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + + I + I +IGG PC + AG+ R G+E LF+++ R+L
Sbjct: 52 IRNIPSCDIPEAIG-------LIGGPPCQSWSEAGALR----GIEDHRGQLFFEFIRVL 99
>gi|57867437|ref|YP_189088.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis RP62A]
gi|57638095|gb|AAW54883.1| DNA-cytosine methyltransferase [Staphylococcus epidermidis RP62A]
Length = 335
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 15/121 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VL LFSG+G ++L+ LG+ + V SE + + + + N+K + + DV+
Sbjct: 5 IKVLELFSGVGSFSISLNTLGIEHE---IVGFSETRKTATQLFCKLHNKKESE-NLGDVR 60
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKE--SSLFYDYFRILDLV 562
+ A ++ DL++ GSPC + + + GL+G + S+L ++ RI++
Sbjct: 61 NVSAKDLD--------VDLLVFGSPCQSFTRAGKQG-GGLKGSDTRSALMWEAVRIMEEC 111
Query: 563 K 563
K
Sbjct: 112 K 112
>gi|388482880|gb|AFK33206.1| Dnmt3 [Apis cerana cerana]
Length = 758
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 513 QMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS--LFYDYFRILDLVKNM 565
+ I DL+IGGSPCN+L+ +N +R GL + LF++Y R+L LVK +
Sbjct: 530 KTIKDIAPIDLLIGGSPCNDLSLAN-PARLGLHDPRGTGILFFEYRRVLKLVKKL 583
>gi|423490993|ref|ZP_17467643.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BtB2-4]
gi|402427209|gb|EJV59319.1| DNA (cytosine-5-)-methyltransferase [Bacillus cereus BtB2-4]
Length = 527
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 14/115 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V FSGIG +AL +LGV + +V I+E+++ ++S+ G ++ D+
Sbjct: 4 LKVFESFSGIGTQSMALKQLGVDYE---TVGIAEIDKFAIQSY---MAIHGETKNYGDIS 57
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++D + M DL PC +L+ S + G EG S L Y+ +++
Sbjct: 58 KIDPTELPDM-------DLFTYSFPCQDLSISGKQRGMG-EGTRSGLLYECEKVI 104
>gi|420395561|ref|ZP_14894788.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
gi|393013997|gb|EJB15171.1| cytosine-specific methyltransferase [Helicobacter pylori CPY1124]
Length = 352
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 477 SEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGS 536
++++++ + S+ Q N K T D+ QL+ + + + D+++GG PC + +
Sbjct: 30 NDIDKDAILSY--QANHKKTQTILCDIMQLNCHNLPCV-----SIDILLGGPPCQSYSTL 82
Query: 537 NRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
+ D ++++LF +Y R+LDLVK M
Sbjct: 83 GKRKMD----EKANLFKEYLRLLDLVKPKM 108
>gi|419467524|ref|ZP_14007404.1| modification methylase HhaI [Streptococcus pneumoniae GA05248]
gi|379542437|gb|EHZ07593.1| modification methylase HhaI [Streptococcus pneumoniae GA05248]
Length = 360
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + E+++ S+ N KG I+ D+
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESAGHKCIGFCEIDKFARESYKAIHNTKGE-IELHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ ++ I G D++ GG PC A S +R G E +LF++ R +++
Sbjct: 55 AVS----DESIRGIGSVDIICGGFPCQ--AFSIAGNRRGFEDTRGTLFFEIARFASILR 107
>gi|416241717|ref|ZP_11632930.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC7]
gi|326571776|gb|EGE21785.1| DNA-cytosine methyltransferase [Moraxella catarrhalis BC7]
Length = 458
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 19/117 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ LF+GIGG RLG + V SE ++ +++ Q N + F D+
Sbjct: 120 FKFIDLFAGIGGI-----RLGAERNGGLCVFSSEFDKFAQQTY--QLNHHE--MPFGDIT 170
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGK-ESSLFYDYFRILD 560
Q+DAN + DL++ G PC + S + +G E K +LF+D RIL+
Sbjct: 171 QIDANNLP-------SHDLLLAGFPCQPFSYSGK--TEGFEDKTRGTLFFDVLRILE 218
>gi|421556177|ref|ZP_16002094.1| cytosine-specific methyltransferase [Neisseria meningitidis 80179]
gi|402338030|gb|EJU73269.1| cytosine-specific methyltransferase [Neisseria meningitidis 80179]
Length = 330
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ + G + +E ++ I ++ + N T + D++
Sbjct: 1 MKIISLFSGCGGLDLGFEKAGFEIPAA-----NEYDKTIWATF--KANHPKTHLIEGDIR 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + G D +IGG PC + AG+ R G++ LF+DY RIL
Sbjct: 54 KIKEEDFPE------GIDGIIGGPPCQSWSEAGALR----GIDDTRGQLFFDYIRIL 100
>gi|386752472|ref|YP_006225691.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
gi|384558730|gb|AFH99197.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi169]
Length = 348
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVS-VDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
V +F G GG G M + ++++++ + S+ Q N K T D+ Q
Sbjct: 4 VADIFCGAGGLSY-----GFSMHPYFELIWANDIDKDAILSY--QANHKETQTILCDIMQ 56
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
L+ + + + D+++GG PC + + + D ++++LF +Y R+LDLVK
Sbjct: 57 LNCHNLPCV-----SIDILLGGPPCQSYSTLGKRKMD----EKANLFKEYLRLLDLVKPK 107
Query: 566 M 566
M
Sbjct: 108 M 108
>gi|316931670|ref|YP_004106652.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1]
gi|315599384|gb|ADU41919.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris DX-1]
Length = 390
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 18/116 (15%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LF+G+GG E+ LHR G +V +I E ++ + G D A ++
Sbjct: 1 MKIAGLFAGVGGLELGLHRAG--HDTLVFSEIWEPAGAVLERRFGGVPNVG---DVASLK 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
L A+ DL+ G PC +L+ + + + G++G++S L FR++D
Sbjct: 56 SLPAD-----------VDLMTAGFPCQDLSQAGKTA--GIKGRKSGLVSHVFRLID 98
>gi|269214273|ref|ZP_05986228.2| modification methylase NgoPII [Neisseria lactamica ATCC 23970]
gi|269210330|gb|EEZ76785.1| modification methylase NgoPII [Neisseria lactamica ATCC 23970]
Length = 330
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ + G + +E ++ I ++ + N T + D++
Sbjct: 1 MKIISLFSGCGGLDLGFEKAGFEIPAA-----NEYDKTIWATF--KANHPKTHLIEGDIR 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + G D +IGG PC + AG+ R G++ LF+DY RIL
Sbjct: 54 KIKEEDFPE------GIDGIIGGPPCQSWSEAGALR----GIDDARGQLFFDYIRIL 100
>gi|423061978|ref|ZP_17050768.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
gi|406716551|gb|EKD11700.1| DNA-cytosine methyltransferase [Arthrospira platensis C1]
Length = 406
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
++SLFSG GG ++ HR G ++ V ++D +E R + I ++Q++
Sbjct: 18 LISLFSGCGGMDLPFHRAGFQV--VWAIDCNEAACQTFRRNISEN------IACDNIQEI 69
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
+ ++ Q DL+ GG PC + S R GL G +L Y YF
Sbjct: 70 EITKVPQA-------DLITGGFPCQDF--SMIWKRPGLTGTRGNL-YTYF 109
>gi|373119248|ref|ZP_09533354.1| DNA (cytosine-5-)-methyltransferase [Lachnospiraceae bacterium
7_1_58FAA]
gi|371664217|gb|EHO29395.1| DNA (cytosine-5-)-methyltransferase [Lachnospiraceae bacterium
7_1_58FAA]
Length = 385
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 13/109 (11%)
Query: 450 LFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDAN 509
+F+GIGG L R G V E+++ S+ + + + + D +++D N
Sbjct: 1 MFAGIGGFRAGLDRAG----GFQCVGHCEIDKYADASYRAIHDIREEELYYPDARKIDPN 56
Query: 510 RIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
+ GFDL+ GG PC A SN R G E +LF++ R+
Sbjct: 57 DLP-------GFDLLCGGFPCQ--AFSNAGRRKGFEDARGTLFFEIARL 96
>gi|448494453|ref|ZP_21609440.1| DNA-cytosine methyltransferase [Halorubrum californiensis DSM
19288]
gi|445689288|gb|ELZ41528.1| DNA-cytosine methyltransferase [Halorubrum californiensis DSM
19288]
Length = 389
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD 502
D V FSG GG ++ R G + + D E R N T + D
Sbjct: 17 DAPVVAGFFSGCGGLDLGFERAGFDV--ALGSDQWEPAAKTYRR-----NFADTEVLEGD 69
Query: 503 VQQLDANRIEQMINAFG----GFDLVIGGSPCNNLAGSNRHS--RDGLE-GKESSLFYDY 555
V++LDA I + + G G D+VIGG PC + N D +E + ++LF ++
Sbjct: 70 VRELDAPTIREAVAGAGYDPDGVDVVIGGPPCQGFSRLNNEQIELDEMEKDRRNTLFEEF 129
Query: 556 FRILDLVKNMM 566
R++ +++ +
Sbjct: 130 LRVVSVLEPQL 140
>gi|15920534|ref|NP_376203.1| modification methylase [Sulfolobus tokodaii str. 7]
gi|15621317|dbj|BAB65312.1| DNA-cytosine methyltransferase [Sulfolobus tokodaii str. 7]
Length = 322
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V+ LFSG GG + +LG ++ + ++N R++ TN TL+ D++ +
Sbjct: 5 VVDLFSGAGGFSLGFKKLGFDIRFAI-----DINHAAARTY--ATNFPTTLVIEDDIRNI 57
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSN 537
IE +I D+VIG PC G+N
Sbjct: 58 TGRDIEYLIGR--KVDIVIGSPPCEPYTGAN 86
>gi|386750888|ref|YP_006224108.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi417]
gi|384557146|gb|AFH97614.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi417]
Length = 348
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVS-VDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
V +F G GG G M + ++++++ + S+ Q N K T D+ Q
Sbjct: 4 VADIFCGAGGLSY-----GFSMHPYFELIWANDIDKDAILSY--QANHKETQTILCDIMQ 56
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
L+ + + + D+++GG PC + + + D ++++LF +Y R+LDLVK
Sbjct: 57 LNCHNLPCV-----SIDILLGGPPCQSYSTLGKRKMD----EKANLFKEYLRLLDLVKPK 107
Query: 566 M 566
M
Sbjct: 108 M 108
>gi|329768652|ref|ZP_08260136.1| hypothetical protein HMPREF0428_01833 [Gemella haemolysans M341]
gi|328836366|gb|EGF86031.1| hypothetical protein HMPREF0428_01833 [Gemella haemolysans M341]
Length = 427
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N L LF+GIGG + + R G + +D RS ++ + I++ D++
Sbjct: 1 MNFLDLFAGIGGFRLGMERAGHKCVGFCEID------KFARSSYKVMHNTENEIEYHDIK 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ E+ D++ GG PC + + + G E +LFY+ R +K
Sbjct: 55 EVTN---EEFRKLRAKVDVICGGFPCQAFSIAGKQL--GFEDTRGTLFYEIARATKEIK 108
>gi|146318633|ref|YP_001198345.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 05ZYH33]
gi|146320840|ref|YP_001200551.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 98HAH33]
gi|253751755|ref|YP_003024896.1| C-5 cytosine-specific DNA methylase [Streptococcus suis SC84]
gi|253755540|ref|YP_003028680.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407]
gi|145689439|gb|ABP89945.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 05ZYH33]
gi|145691646|gb|ABP92151.1| C-5 cytosine-specific DNA methylase [Streptococcus suis 98HAH33]
gi|251816044|emb|CAZ51664.1| C-5 cytosine-specific DNA methylase [Streptococcus suis SC84]
gi|251818004|emb|CAZ55786.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407]
Length = 451
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ S+ N +G I++ D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGE-IEYHDIK 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
++ + Q G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 EVTDHDFRQFR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|59800809|ref|YP_207521.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae
FA 1090]
gi|254493277|ref|ZP_05106448.1| modification methylase NgoFVII [Neisseria gonorrhoeae 1291]
gi|268594414|ref|ZP_06128581.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae
35/02]
gi|268596411|ref|ZP_06130578.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae
FA19]
gi|268598542|ref|ZP_06132709.1| modification methylase NgoFVII [Neisseria gonorrhoeae MS11]
gi|268600894|ref|ZP_06135061.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID18]
gi|268681681|ref|ZP_06148543.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID332]
gi|268683908|ref|ZP_06150770.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-92-679]
gi|291044296|ref|ZP_06570005.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae
DGI2]
gi|293399487|ref|ZP_06643640.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|59717704|gb|AAW89109.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae
FA 1090]
gi|226512317|gb|EEH61662.1| modification methylase NgoFVII [Neisseria gonorrhoeae 1291]
gi|268547803|gb|EEZ43221.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae
35/02]
gi|268550199|gb|EEZ45218.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae
FA19]
gi|268582673|gb|EEZ47349.1| modification methylase NgoFVII [Neisseria gonorrhoeae MS11]
gi|268585025|gb|EEZ49701.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID18]
gi|268621965|gb|EEZ54365.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID332]
gi|268624192|gb|EEZ56592.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-92-679]
gi|291011190|gb|EFE03186.1| site-specific DNA-methyltransferase M.NgoVII [Neisseria gonorrhoeae
DGI2]
gi|291610056|gb|EFF39178.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
Length = 374
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQK--GTLIDFADVQ 504
+LSLFSG GG ++ H+ G + V + D S W ++ +K G +I D++
Sbjct: 18 ILSLFSGCGGLDLGFHQAGC--ETVWANDFSH--------WACESFRKNIGDVIVEGDIE 67
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
Q++ N D+++GG PC + S + GLEG+ +L+ + R ++ K
Sbjct: 68 QINPND-----PTIPDCDIILGGFPCQDF--SMIWKQPGLEGERGNLYKSFLRFVNAKK 119
>gi|209525887|ref|ZP_03274422.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
gi|209493696|gb|EDZ94016.1| DNA-cytosine methyltransferase [Arthrospira maxima CS-328]
Length = 406
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
++SLFSG GG ++ HR G ++ V ++D +E R + I ++Q++
Sbjct: 18 LISLFSGCGGMDLPFHRAGFQV--VWAIDCNEAACQTFRRNISEN------IACDNIQEI 69
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
+ ++ Q DL+ GG PC + S R GL G +L Y YF
Sbjct: 70 EITKVPQA-------DLITGGFPCQDF--SMIWKRPGLTGTRGNL-YTYF 109
>gi|268603200|ref|ZP_06137367.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID1]
gi|268587331|gb|EEZ52007.1| modification methylase NgoFVII [Neisseria gonorrhoeae PID1]
Length = 374
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQK--GTLIDFADVQ 504
+LSLFSG GG ++ H+ G + V + D S W ++ +K G +I D++
Sbjct: 18 ILSLFSGCGGLDLGFHQAGC--ETVWANDFSH--------WACESFRKNIGDVIVEGDIE 67
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
Q++ N D+++GG PC + S + GLEG+ +L+ + R ++ K
Sbjct: 68 QINPND-----PTIPDCDIILGGFPCQDF--SMIWKQPGLEGERGNLYKSFLRFVNAKK 119
>gi|421221549|ref|ZP_15678354.1| modification methylase Rho11sI [Streptococcus pneumoniae 2070425]
gi|395583369|gb|EJG43815.1| modification methylase Rho11sI [Streptococcus pneumoniae 2070425]
Length = 360
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + E+++ S+ N KG I+ D+
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESAGHKCIGFCEIDKFARESYKAIHNTKGE-IELHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
+ ++ I G D++ GG PC ++AG+ R G E +LF++ R ++
Sbjct: 55 AVS----DESIRGIGSVDIICGGFPCQAFSIAGNRR----GFEDTRGTLFFEIARFASIL 106
Query: 563 K 563
+
Sbjct: 107 R 107
>gi|260591850|ref|ZP_05857308.1| type II DNA modification methyltransferase [Prevotella veroralis
F0319]
gi|260536134|gb|EEX18751.1| type II DNA modification methyltransferase [Prevotella veroralis
F0319]
Length = 166
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++SLFSG GG + H G R ++ +E + I ++ + N T + D++
Sbjct: 1 MNLISLFSGAGGLDKGFHNAGFR-----TMVANEFDPKICPTF--KANFPDTKLIEGDIR 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
+ + + +IGG PC + S S G++ LFY+Y RIL+ V+
Sbjct: 54 NVKDGEFPKHVAG------IIGGPPCQSW--SEAGSLKGIDDARGQLFYEYIRILEAVQP 105
Query: 565 MM 566
+
Sbjct: 106 LF 107
>gi|188527268|ref|YP_001909955.1| type II DNA modification methyltransferase [Helicobacter pylori
Shi470]
gi|188143508|gb|ACD47925.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi470]
Length = 348
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 477 SEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGS 536
++++++ + S+ Q N K T D+ QL+ + + + D+++GG PC + +
Sbjct: 30 NDIDKDAILSY--QANHKETQTILCDIMQLNCHNLPCV-----SIDILLGGPPCQSYSTL 82
Query: 537 NRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
+ D ++++LF +Y R+LDLVK M
Sbjct: 83 GKRKMD----EKANLFKEYLRLLDLVKPKM 108
>gi|11386930|sp|Q59606.1|MTF7_NEIGO RecName: Full=Modification methylase NgoFVII; Short=M.NgoFVII;
AltName: Full=Cytosine-specific methyltransferase
NgoFVII; Short=M.NgoVII
gi|1165245|gb|AAA86270.1| M.NgoVII [Neisseria gonorrhoeae]
Length = 374
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQK--GTLIDFADVQ 504
+LSLFSG GG ++ H+ G + V + D S W ++ +K G +I D++
Sbjct: 18 ILSLFSGCGGLDLGFHQAGC--ETVWANDFSH--------WACESFRKNIGDVIVEGDIE 67
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
Q++ N D+++GG PC + S + GLEG+ +L+ + R ++ K
Sbjct: 68 QINPND-----PTIPDCDIILGGFPCQDF--SMIWKQPGLEGERGNLYKSFLRFVNAKK 119
>gi|376004314|ref|ZP_09782038.1| Modification methylase M.Asp8005ORF4014 (Cytosine-specific
methyltransferase M.Asp8005ORF4014) [Arthrospira sp. PCC
8005]
gi|375327309|emb|CCE17791.1| Modification methylase M.Asp8005ORF4014 (Cytosine-specific
methyltransferase M.Asp8005ORF4014) [Arthrospira sp. PCC
8005]
Length = 406
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 18/110 (16%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
++SLFSG GG ++ HR G ++ V ++D +E R + I ++Q++
Sbjct: 18 LISLFSGCGGMDLPFHRAGFQV--VWAIDCNEAACQTFRRNISEN------IACDNIQEI 69
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
+ ++ Q DL+ GG PC + S R GL G +L Y YF
Sbjct: 70 EITKVPQA-------DLITGGFPCQDF--SMIWKRPGLTGTRGNL-YTYF 109
>gi|227536485|ref|ZP_03966534.1| site-specific DNA-methyltransferase [Sphingobacterium spiritivorum
ATCC 33300]
gi|227243562|gb|EEI93577.1| site-specific DNA-methyltransferase [Sphingobacterium spiritivorum
ATCC 33300]
Length = 349
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLFSGIGG ++A +G +NV S + R +++ +W T + DF
Sbjct: 6 SLFSGIGGFDIAASWMG--WQNVFSCEKDPFCRTVLKHYWPNTAHYEDIYDF-------- 55
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ + G D++ GG PC + + R R G + + LF + RI+
Sbjct: 56 ----RATHFRGHIDIISGGFPCQPFSQAGR--RKGAK-DDRYLFPETIRII 99
>gi|224036442|pdb|3G7U|A Chain A, Crystal Structure Of Putative Dna Modification
Methyltransferase Encoded Within Prophage Cp-933r
(E.Coli)
Length = 376
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+NV+ LFSG+GG + R G +K V +D +N + + N +L DV
Sbjct: 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAI-------NFPRSLHVQEDVS 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
L+A I+ D +IGG PC + + + D + L+ ++R++
Sbjct: 56 LLNAEIIKGFFKNDMPIDGIIGGPPCQGFSSIGKGNPD---DSRNQLYMHFYRLV 107
>gi|108797795|ref|YP_637992.1| DNA-cytosine methyltransferase [Mycobacterium sp. MCS]
gi|119866887|ref|YP_936839.1| DNA-cytosine methyltransferase [Mycobacterium sp. KMS]
gi|108768214|gb|ABG06936.1| DNA-cytosine methyltransferase [Mycobacterium sp. MCS]
gi|119692976|gb|ABL90049.1| DNA-cytosine methyltransferase [Mycobacterium sp. KMS]
Length = 385
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 20/117 (17%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
G V LF+GIGG EV L R G + + +I R ++ DV
Sbjct: 2 GKTVAGLFAGIGGLEVGLSRSG--WETTLLCEIDPAARAVLSH------------HMPDV 47
Query: 504 Q-QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ Q D R+ + + DL+ G PC +L+ + R G+ GK S L + FR++
Sbjct: 48 ELQDDVRRLRALPQS---LDLLAAGFPCQDLSQAGRTR--GIAGKNSGLVGEVFRLI 99
>gi|168490143|ref|ZP_02714342.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae SP195]
gi|183571468|gb|EDT91996.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae SP195]
gi|321157174|emb|CBW39159.1| Cytosine-specific DNA methyltransferase [Streptococcus phage 11865]
Length = 360
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + E+++ S+ N KG I+ D+
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESAGHKCIGFCEIDKFARESYKAIHNTKGE-IELHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ ++ I G D++ GG PC A S +R G E +LF++ R +++
Sbjct: 55 AVS----DESIRGIGSVDIICGGFPCQ--AFSIAGNRRGFEDTRGTLFFEIARFASILR 107
>gi|268686152|ref|ZP_06153014.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-93-1035]
gi|268626436|gb|EEZ58836.1| modification methylase NgoFVII [Neisseria gonorrhoeae SK-93-1035]
Length = 374
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQK--GTLIDFADVQ 504
+LSLFSG GG ++ H+ G + V + D S W ++ +K G +I D++
Sbjct: 18 ILSLFSGCGGLDLGFHQAGC--ETVWANDFSH--------WACESFRKNIGDVIVEGDIE 67
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
Q++ N D+++GG PC + S + GLEG+ +L+ + R ++ K
Sbjct: 68 QINPND-----PTIPDCDIILGGFPCQDF--SMIWKQPGLEGERGNLYKSFLRFVNAKK 119
>gi|268611949|ref|ZP_06145676.1| DNA-cytosine methyltransferase [Ruminococcus flavefaciens FD-1]
Length = 352
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VLSLF GI +AL R G+ ++ + +I + + + + G + D D
Sbjct: 1 MKVLSLFDGISCGMLALQRAGIPVECYDAFEIDKYAVTVSKRNFPVIVHHGNVYD-GDFT 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
Q F G+DL++GGSPC + + + G+ LF +Y R L+
Sbjct: 60 Q------------FRGYDLLLGGSPCTYWSIAKKDREVDCNGEGFRLFKEYVRALE 103
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 387 KLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVL 437
KL P+E + ++ L P N+T GIS T RYK +GN + VD +A+ L L
Sbjct: 304 KLTPIEAERLQTL---PDNYT--AGISNTQRYKCIGNGWTVDVIAHILGGL 349
>gi|227525081|ref|ZP_03955130.1| possible DNA (cytosine-5-)-methyltransferase, partial
[Lactobacillus hilgardii ATCC 8290]
gi|227087758|gb|EEI23070.1| possible DNA (cytosine-5-)-methyltransferase [Lactobacillus
hilgardii ATCC 8290]
Length = 143
Score = 42.7 bits (99), Expect = 0.51, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
IN + LFSG GG L + + ++ + E++R I + TN I +D+Q
Sbjct: 3 INAIDLFSGCGGLTEGLEQSEINVEYAI-----ELDRKISNIY--ATNHPNVKIINSDIQ 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHS-RDGLEGKESSLFYDYFRILDLV 562
++ +QM N +LV G PC NR++ R + + L +Y R++ ++
Sbjct: 56 KVTDTTFKQMENV----NLVAGCPPCQGFTQMNRNNKRSNYKDSRNMLIQEYLRVVKII 110
>gi|420404923|ref|ZP_14904103.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
gi|393024793|gb|EJB25903.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6271]
Length = 351
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVS-VDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
V +F G GG G M + ++++++ + S+ Q N K T D+ Q
Sbjct: 4 VADIFCGAGGLSY-----GFSMHPYFELIWANDIDKDAILSY--QANHKETQTILCDIMQ 56
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
L+ + + + D+++GG PC + + + D ++++LF +Y R+LDLVK
Sbjct: 57 LNCHNLPCV-----SIDILLGGPPCQSYSTLGKRKMD----EKANLFKEYLRLLDLVKPK 107
Query: 566 M 566
M
Sbjct: 108 M 108
>gi|425464802|ref|ZP_18844112.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9809]
gi|389833097|emb|CCI22700.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9809]
Length = 347
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+G+GG +AL LG + V SE++ + + + G L D D+++L+
Sbjct: 5 IDLFAGVGGFRIALENLGCQ-----CVFSSEIDPHSQKGYLANY---GHLPDNQDIRKLE 56
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
A + D++ GG PC + + R + G E +LF++ RIL
Sbjct: 57 AKTVPDH-------DILCGGFPCQAFSIAGR--KHGFEDARGTLFFEVARIL 99
>gi|356995155|emb|CBZ42090.1| C-5 cytosine-specific DNA methylase [Streptococcus suis]
Length = 451
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ S+ N +G I++ D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGE-IEYHDIK 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
++ + Q G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 EVTDHDFRQFR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|418075122|ref|ZP_12712365.1| modification methylase HhaI [Streptococcus pneumoniae GA47502]
gi|418143175|ref|ZP_12779977.1| modification methylase HhaI [Streptococcus pneumoniae GA13494]
gi|421232980|ref|ZP_15689615.1| modification methylase Rho11sI [Streptococcus pneumoniae 2080076]
gi|353752377|gb|EHD33006.1| modification methylase HhaI [Streptococcus pneumoniae GA47502]
gi|353810187|gb|EHD90440.1| modification methylase HhaI [Streptococcus pneumoniae GA13494]
gi|395592825|gb|EJG53080.1| modification methylase Rho11sI [Streptococcus pneumoniae 2080076]
Length = 360
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + E+++ S+ N KG I+ D+
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESAGHKCIGFCEIDKFARESYKAIHNTKGE-IELHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ ++ I G D++ GG PC A S +R G E +LF++ R +++
Sbjct: 55 AVS----DESIRGIGSVDIICGGFPCQ--AFSIAGNRRGFEDTRGTLFFEIARFASILR 107
>gi|409991706|ref|ZP_11274944.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
gi|409991734|ref|ZP_11274970.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
gi|79835464|gb|ABB52092.1| Mod [Arthrospira platensis]
gi|409937402|gb|EKN78830.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
gi|409937432|gb|EKN78858.1| DNA-cytosine methyltransferase [Arthrospira platensis str. Paraca]
Length = 406
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 18/114 (15%)
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD 502
D ++SLFSG GG ++ HR G + V ++D + R +T I +
Sbjct: 14 DKPKLVSLFSGCGGMDLPFHRAGFEV--VWAIDCNGAACRTFRRNISET------IACNN 65
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
+Q++D ++ + DL+ GG PC + + + R GL G +L Y YF
Sbjct: 66 IQEIDITKVPKA-------DLITGGFPCQDFSMIGK--RPGLTGTRGNL-YTYF 109
>gi|253755079|ref|YP_003028219.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407]
gi|251817543|emb|CAZ55290.1| C-5 cytosine-specific DNA methylase [Streptococcus suis BM407]
Length = 451
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ S+ N +G I++ D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGE-IEYHDIK 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
++ + Q G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 EVTDHDFRQFR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|168821212|ref|ZP_02833212.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|409247997|ref|YP_006888689.1| C-5 cytosine-specific DNA methylase family protein [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
gi|205342142|gb|EDZ28906.1| modification methylase HaeIII [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|320088731|emb|CBY98489.1| C-5 cytosine-specific DNA methylase family protein [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
Length = 361
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 22/131 (16%)
Query: 434 LSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQ 493
+S + E D I VLSLFSG GG + + G + V + D+ E + +++ T+
Sbjct: 1 MSSVFERENDNIRVLSLFSGCGGMDFGITSAGGDI--VFANDVVENACKTLGNYFPDTD- 57
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSL 551
I D+ Q I +F D+V+GG PC ++AG+ + + D ++L
Sbjct: 58 ----IRHGDISQ---------IQSFPDVDIVVGGYPCQSFSMAGNRKPNND----DRTNL 100
Query: 552 FYDYFRILDLV 562
+ + R+L+ +
Sbjct: 101 YKHFLRVLETI 111
>gi|2894386|emb|CAA74996.1| Bpu10I (5m)cytosine-specific DNA modification methyltransferase
(C1) [Bacillus pumilus]
Length = 398
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 22/124 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQT---NQKGTLIDFA 501
++ + LF+G GG + G + V +D W T N++ + +
Sbjct: 8 VSPIDLFAGAGGMSLGFENAGFEIPLAVEID----------DWAVDTYRKNRENSNVIKN 57
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ ++D +Q F G D VIGG PC +++ SNR + D + L+ + R++
Sbjct: 58 DILEIDNAFFKQ----FSGIDAVIGGPPCQGFSISASNRRNPD---DPRNYLYRQFLRVI 110
Query: 560 DLVK 563
LVK
Sbjct: 111 KLVK 114
>gi|422316149|ref|ZP_16397550.1| DNA (cytosine-5-)-methyltransferase [Fusobacterium periodonticum
D10]
gi|404591451|gb|EKA93595.1| DNA (cytosine-5-)-methyltransferase [Fusobacterium periodonticum
D10]
Length = 361
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQTNQKGTLIDFADV 503
+ + LF+G GG + + + G ++ +D + N + R W N+ I ++
Sbjct: 29 LKAIELFAGAGGLALGVEKAGFNTIGLIEIDKNACNTLKLNRPNWNVINENIANISLKNL 88
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ D I++ G DL+ GG+PC A S R GLE +LFY Y L ++
Sbjct: 89 E--DFFSIKK-----GELDLLSGGAPCQ--AFSYAGKRLGLEDTRGTLFYHYALFLKQLQ 139
Query: 564 NMM 566
M
Sbjct: 140 PKM 142
>gi|228969793|ref|ZP_04130554.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|402564317|ref|YP_006607041.1| site-specific DNA-methyltransferase [Bacillus thuringiensis HD-771]
gi|228789920|gb|EEM37741.1| Cytosine-specific methyltransferase [Bacillus thuringiensis serovar
sotto str. T04001]
gi|401792969|gb|AFQ19008.1| site-specific DNA-methyltransferase [Bacillus thuringiensis HD-771]
Length = 246
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 15/121 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ +L LFSGIGG +A G+ + +I N+ ++ W + F+D++
Sbjct: 1 MKMLDLFSGIGGISLAADWAGI--ETTAFCEIEPFNQKVLNKHWPKVPI------FSDIR 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
L +E+ G +V GG PC ++AG R D + L+ + FRI++ +
Sbjct: 53 TLTKQSLEERGVDVGTISIVAGGFPCQPYSVAGKQRGQED-----DRDLWPEMFRIIEEI 107
Query: 563 K 563
+
Sbjct: 108 R 108
>gi|291568714|dbj|BAI90986.1| cytosine-specific methyltransferase [Arthrospira platensis NIES-39]
Length = 406
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 18/114 (15%)
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD 502
D ++SLFSG GG ++ HR G + V ++D + R +T I +
Sbjct: 14 DKPKLVSLFSGCGGMDLPFHRAGFEV--VWAIDCNGAACRTFRRNISET------IACNN 65
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
+Q++D ++ + DL+ GG PC + + + R GL G +L Y YF
Sbjct: 66 IQEIDITKVPKA-------DLITGGFPCQDFSMIGK--RPGLTGTRGNL-YTYF 109
>gi|168494837|ref|ZP_02718980.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|168494899|ref|ZP_02719042.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|168494952|ref|ZP_02719095.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|168494999|ref|ZP_02719142.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|418174730|ref|ZP_12811334.1| modification methylase HhaI [Streptococcus pneumoniae GA41277]
gi|421235148|ref|ZP_15691761.1| modification methylase Rho11sI [Streptococcus pneumoniae 2061617]
gi|183575153|gb|EDT95681.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|183575203|gb|EDT95731.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|183575231|gb|EDT95759.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|183575300|gb|EDT95828.1| cytosine-specific methyltransferase NlaX (M.NlaX) [Streptococcus
pneumoniae CDC3059-06]
gi|353834318|gb|EHE14421.1| modification methylase HhaI [Streptococcus pneumoniae GA41277]
gi|395599113|gb|EJG59296.1| modification methylase Rho11sI [Streptococcus pneumoniae 2061617]
Length = 360
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + E+++ S+ N KG I+ D+
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESAGHKCIGFCEIDKFARESYKAIHNTKGE-IELHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
+ ++ I G D++ GG PC ++AG+ R G E +LF++ R ++
Sbjct: 55 AVS----DESIRGIGSVDIICGGFPCQAFSIAGNRR----GFEDTRGTLFFEIARFASIL 106
Query: 563 K 563
+
Sbjct: 107 R 107
>gi|22537444|ref|NP_688295.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae
2603V/R]
gi|76797962|ref|ZP_00780222.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae
18RS21]
gi|77406085|ref|ZP_00783160.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae H36B]
gi|313890485|ref|ZP_07824113.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus
SPIN 20026]
gi|386316830|ref|YP_006012994.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
gi|416851031|ref|ZP_11908372.1| modification methylase HpaII [Streptococcus pseudoporcinus LQ
940-04]
gi|22534321|gb|AAN00168.1|AE014251_12 C-5 cytosine-specific DNA methylase [Streptococcus agalactiae
2603V/R]
gi|76586686|gb|EAO63184.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae
18RS21]
gi|77175318|gb|EAO78112.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae H36B]
gi|313121002|gb|EFR44113.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pseudoporcinus
SPIN 20026]
gi|323127117|gb|ADX24414.1| C-5 cytosine-specific DNA methylase [Streptococcus dysgalactiae
subsp. equisimilis ATCC 12394]
gi|356740710|gb|EHI65933.1| modification methylase HpaII [Streptococcus pseudoporcinus LQ
940-04]
Length = 451
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ S+ N +G I++ D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGE-IEYHDIK 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
++ + Q G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 EVTDHDFRQFR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|425447575|ref|ZP_18827560.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9443]
gi|389731828|emb|CCI04164.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9443]
Length = 347
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +AL LG + V S +I ++ + + + G L D D+++L+
Sbjct: 5 IDLFAGIGGFRIALENLGCQC--VFSSEIDPHSQKVYLANY------GHLPDNQDIRKLE 56
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ D++ GG PC + + R + G E +LF++ RIL
Sbjct: 57 VKTVPDH-------DILCGGFPCQAFSIAGR--KHGFEDARGTLFFEVARIL 99
>gi|381179821|ref|ZP_09888668.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
gi|380768299|gb|EIC02291.1| DNA-cytosine methyltransferase [Treponema saccharophilum DSM 2985]
Length = 415
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 64/147 (43%), Gaps = 12/147 (8%)
Query: 417 RYKSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDI 476
R+K G + Q H + + LF+G GG + L + G + +
Sbjct: 17 RFKDTGKNLQ----NCHTDSISLTRNPSFTFIDLFAGAGGLSLGLEQAGF-----TPIFV 67
Query: 477 SEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGS 536
+E+ ++ + N D+++L+ +I++ + F DLV GG PC + +
Sbjct: 68 NEIVPQFNETYRKNRNLSDDQYFVGDIKELNE-KIDEYLPRFKDADLVCGGPPCQGFSMA 126
Query: 537 NRHSRDGLEGKESSLFYDYFRILDLVK 563
NR ++ + L+ +Y ++L +V+
Sbjct: 127 NRQRI--IDDPRNQLYKEYLKLLSVVR 151
>gi|15801798|ref|NP_287816.1| DNA modification methyltransferase encoded within prophage CP-933R
[Escherichia coli O157:H7 str. EDL933]
gi|15831207|ref|NP_309980.1| methyltransferase [Escherichia coli O157:H7 str. Sakai]
gi|217329077|ref|ZP_03445157.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|415819247|ref|ZP_11508690.1| modification methylase XorII [Escherichia coli OK1180]
gi|416311247|ref|ZP_11656935.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. 1044]
gi|417194069|ref|ZP_12015490.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli 4.0522]
gi|417591375|ref|ZP_12242079.1| modification methylase XorII [Escherichia coli 2534-86]
gi|419109212|ref|ZP_13654286.1| cytosine-specific methyltransferase [Escherichia coli DEC4F]
gi|419887252|ref|ZP_14407849.1| methyltransferase [Escherichia coli O111:H8 str. CVM9570]
gi|419893202|ref|ZP_14413198.1| methyltransferase [Escherichia coli O111:H8 str. CVM9574]
gi|420092142|ref|ZP_14603863.1| methyltransferase [Escherichia coli O111:H8 str. CVM9602]
gi|420093064|ref|ZP_14604747.1| methyltransferase [Escherichia coli O111:H8 str. CVM9634]
gi|420294065|ref|ZP_14796180.1| modification methylase XorII [Escherichia coli TW11039]
gi|421818043|ref|ZP_16253571.1| cytosine-specific methyltransferase [Escherichia coli 10.0821]
gi|423700358|ref|ZP_17674845.1| modification methylase XorII [Escherichia coli PA31]
gi|424077054|ref|ZP_17814191.1| modification methylase XorII [Escherichia coli FDA505]
gi|424109477|ref|ZP_17843855.1| modification methylase XorII [Escherichia coli 93-001]
gi|424121490|ref|ZP_17854985.1| modification methylase XorII [Escherichia coli PA5]
gi|424140437|ref|ZP_17872496.1| modification methylase XorII [Escherichia coli PA14]
gi|424146885|ref|ZP_17878417.1| modification methylase XorII [Escherichia coli PA15]
gi|424442832|ref|ZP_17901068.1| modification methylase XorII [Escherichia coli PA32]
gi|424455388|ref|ZP_17906703.1| modification methylase XorII [Escherichia coli PA33]
gi|424474711|ref|ZP_17924182.1| modification methylase XorII [Escherichia coli PA42]
gi|425097610|ref|ZP_18500468.1| cytosine-specific methyltransferase [Escherichia coli 3.4870]
gi|425109650|ref|ZP_18511704.1| modification methylase XorII [Escherichia coli 6.0172]
gi|425122956|ref|ZP_18524591.1| cytosine-specific methyltransferase [Escherichia coli 8.0586]
gi|425162032|ref|ZP_18561041.1| modification methylase XorII [Escherichia coli FDA506]
gi|425167678|ref|ZP_18566299.1| modification methylase XorII [Escherichia coli FDA507]
gi|425173808|ref|ZP_18572047.1| modification methylase XorII [Escherichia coli FDA504]
gi|425186809|ref|ZP_18584154.1| modification methylase XorII [Escherichia coli FRIK1997]
gi|425211416|ref|ZP_18606966.1| modification methylase XorII [Escherichia coli PA4]
gi|425221302|ref|ZP_18616241.1| modification methylase XorII [Escherichia coli PA23]
gi|425230280|ref|ZP_18624485.1| modification methylase XorII [Escherichia coli PA45]
gi|425236440|ref|ZP_18630263.1| modification methylase XorII [Escherichia coli TT12B]
gi|425410596|ref|ZP_18792519.1| modification methylase XorII [Escherichia coli NE098]
gi|425416879|ref|ZP_18798301.1| modification methylase XorII [Escherichia coli FRIK523]
gi|425428121|ref|ZP_18808912.1| modification methylase XorII [Escherichia coli 0.1304]
gi|428952773|ref|ZP_19024700.1| cytosine-specific methyltransferase [Escherichia coli 88.1042]
gi|428958607|ref|ZP_19030084.1| cytosine-specific methyltransferase [Escherichia coli 89.0511]
gi|428977466|ref|ZP_19047435.1| cytosine-specific methyltransferase [Escherichia coli 90.2281]
gi|428983239|ref|ZP_19052772.1| cytosine-specific methyltransferase [Escherichia coli 93.0055]
gi|429007683|ref|ZP_19075365.1| cytosine-specific methyltransferase [Escherichia coli 95.1288]
gi|429026029|ref|ZP_19092208.1| cytosine-specific methyltransferase [Escherichia coli 96.0427]
gi|429044300|ref|ZP_19109123.1| cytosine-specific methyltransferase [Escherichia coli 96.0107]
gi|429050003|ref|ZP_19114618.1| cytosine-specific methyltransferase [Escherichia coli 97.0003]
gi|429060969|ref|ZP_19125042.1| cytosine-specific methyltransferase [Escherichia coli 97.0007]
gi|429077498|ref|ZP_19140704.1| cytosine-specific methyltransferase [Escherichia coli 99.0713]
gi|429825942|ref|ZP_19357170.1| cytosine-specific methyltransferase [Escherichia coli 96.0109]
gi|432874894|ref|ZP_20093758.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE147]
gi|444963437|ref|ZP_21281107.1| cytosine-specific methyltransferase [Escherichia coli 99.1775]
gi|444985261|ref|ZP_21302085.1| cytosine-specific methyltransferase [Escherichia coli PA11]
gi|445028738|ref|ZP_21344461.1| cytosine-specific methyltransferase [Escherichia coli 99.1781]
gi|445050378|ref|ZP_21365494.1| cytosine-specific methyltransferase [Escherichia coli 95.0083]
gi|445056433|ref|ZP_21371330.1| cytosine-specific methyltransferase [Escherichia coli 99.0670]
gi|12515382|gb|AAG56430.1|AE005370_3 putative DNA modification methyltransferase encoded within prophage
CP-933R [Escherichia coli O157:H7 str. EDL933]
gi|13361418|dbj|BAB35376.1| putative methyltransferase [Escherichia coli O157:H7 str. Sakai]
gi|217317516|gb|EEC25944.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str.
TW14588]
gi|323179669|gb|EFZ65230.1| modification methylase XorII [Escherichia coli OK1180]
gi|326343203|gb|EGD66970.1| DNA-cytosine methyltransferase [Escherichia coli O157:H7 str. 1044]
gi|345341862|gb|EGW74262.1| modification methylase XorII [Escherichia coli 2534-86]
gi|377959866|gb|EHV23358.1| cytosine-specific methyltransferase [Escherichia coli DEC4F]
gi|386189711|gb|EIH78465.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli 4.0522]
gi|388363244|gb|EIL27181.1| methyltransferase [Escherichia coli O111:H8 str. CVM9570]
gi|388368084|gb|EIL31736.1| methyltransferase [Escherichia coli O111:H8 str. CVM9574]
gi|390647701|gb|EIN26550.1| modification methylase XorII [Escherichia coli FDA505]
gi|390665446|gb|EIN42751.1| modification methylase XorII [Escherichia coli 93-001]
gi|390686521|gb|EIN61873.1| modification methylase XorII [Escherichia coli PA5]
gi|390704765|gb|EIN78595.1| modification methylase XorII [Escherichia coli PA15]
gi|390705490|gb|EIN79215.1| modification methylase XorII [Escherichia coli PA14]
gi|390747071|gb|EIO17657.1| modification methylase XorII [Escherichia coli PA31]
gi|390747904|gb|EIO18447.1| modification methylase XorII [Escherichia coli PA32]
gi|390749499|gb|EIO19766.1| modification methylase XorII [Escherichia coli PA33]
gi|390773013|gb|EIO41491.1| modification methylase XorII [Escherichia coli PA42]
gi|390795679|gb|EIO62963.1| modification methylase XorII [Escherichia coli TW11039]
gi|394380944|gb|EJE58656.1| methyltransferase [Escherichia coli O111:H8 str. CVM9602]
gi|394399788|gb|EJE75778.1| methyltransferase [Escherichia coli O111:H8 str. CVM9634]
gi|408084073|gb|EKH17860.1| modification methylase XorII [Escherichia coli FDA506]
gi|408086548|gb|EKH20073.1| modification methylase XorII [Escherichia coli FDA507]
gi|408096843|gb|EKH29768.1| modification methylase XorII [Escherichia coli FDA504]
gi|408105825|gb|EKH37958.1| modification methylase XorII [Escherichia coli FRIK1997]
gi|408131948|gb|EKH61963.1| modification methylase XorII [Escherichia coli PA4]
gi|408133917|gb|EKH63774.1| modification methylase XorII [Escherichia coli PA23]
gi|408149755|gb|EKH78421.1| modification methylase XorII [Escherichia coli PA45]
gi|408160513|gb|EKH88526.1| modification methylase XorII [Escherichia coli TT12B]
gi|408329862|gb|EKJ45250.1| modification methylase XorII [Escherichia coli NE098]
gi|408343017|gb|EKJ57429.1| modification methylase XorII [Escherichia coli FRIK523]
gi|408350074|gb|EKJ63978.1| modification methylase XorII [Escherichia coli 0.1304]
gi|408554511|gb|EKK31443.1| modification methylase XorII [Escherichia coli 6.0172]
gi|408554622|gb|EKK31550.1| cytosine-specific methyltransferase [Escherichia coli 3.4870]
gi|408586711|gb|EKK61432.1| cytosine-specific methyltransferase [Escherichia coli 8.0586]
gi|408615016|gb|EKK88256.1| cytosine-specific methyltransferase [Escherichia coli 10.0821]
gi|427210122|gb|EKV80068.1| cytosine-specific methyltransferase [Escherichia coli 88.1042]
gi|427211538|gb|EKV81285.1| cytosine-specific methyltransferase [Escherichia coli 89.0511]
gi|427228975|gb|EKV97341.1| cytosine-specific methyltransferase [Escherichia coli 90.2281]
gi|427247790|gb|EKW14840.1| cytosine-specific methyltransferase [Escherichia coli 93.0055]
gi|427267864|gb|EKW33070.1| cytosine-specific methyltransferase [Escherichia coli 95.1288]
gi|427284912|gb|EKW48922.1| cytosine-specific methyltransferase [Escherichia coli 96.0427]
gi|427302384|gb|EKW65184.1| cytosine-specific methyltransferase [Escherichia coli 97.0003]
gi|427303783|gb|EKW66486.1| cytosine-specific methyltransferase [Escherichia coli 96.0107]
gi|427318304|gb|EKW80177.1| cytosine-specific methyltransferase [Escherichia coli 97.0007]
gi|427332902|gb|EKW94022.1| cytosine-specific methyltransferase [Escherichia coli 99.0713]
gi|429256541|gb|EKY40710.1| cytosine-specific methyltransferase [Escherichia coli 96.0109]
gi|431403253|gb|ELG86535.1| DNA (cytosine-5-)-methyltransferase [Escherichia coli KTE147]
gi|444580321|gb|ELV56257.1| cytosine-specific methyltransferase [Escherichia coli 99.1775]
gi|444596653|gb|ELV71706.1| cytosine-specific methyltransferase [Escherichia coli PA11]
gi|444645113|gb|ELW18193.1| cytosine-specific methyltransferase [Escherichia coli 99.1781]
gi|444669859|gb|ELW41805.1| cytosine-specific methyltransferase [Escherichia coli 95.0083]
gi|444671532|gb|ELW43333.1| cytosine-specific methyltransferase [Escherichia coli 99.0670]
Length = 383
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 10/115 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+NV+ LFSG+GG + R G +K V +D +N + + N +L DV
Sbjct: 1 MNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAI-------NFPRSLHVQEDVS 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
L+A I+ D +IGG PC + + + D + L+ ++R++
Sbjct: 54 LLNAEIIKGFFKNDMPIDGIIGGPPCQGFSSIGKGNPD---DSRNQLYMHFYRLV 105
>gi|379730544|ref|YP_005322740.1| DNA-cytosine methyltransferase [Saprospira grandis str. Lewin]
gi|378576155|gb|AFC25156.1| DNA-cytosine methyltransferase [Saprospira grandis str. Lewin]
Length = 418
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 46/118 (38%), Gaps = 16/118 (13%)
Query: 442 PDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
P + LF+GIGG +AL LG + S W++ QK +F
Sbjct: 86 PAKFKFIDLFAGIGGFRLALQSLG--------------GECVFSSEWDKQAQKTYYTNFG 131
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ D + FD++ G PC + + + R G E +LF+D I+
Sbjct: 132 EYPFGDITKESVKSQIPDDFDILCAGFPCQAFSIAGK--RGGFEDTRGTLFFDVAEII 187
>gi|384899203|ref|YP_005774583.1| Type II DNA modification enzyme [Helicobacter pylori F30]
gi|317179147|dbj|BAJ56935.1| Type II DNA modification enzyme [Helicobacter pylori F30]
Length = 351
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 477 SEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGS 536
++++++ + S+ Q N K T D+ QL+ + + + D+++GG PC + +
Sbjct: 30 NDIDKDAILSY--QANHKETQTILCDIMQLNCHNLPCV-----SIDILLGGPPCQSYSTL 82
Query: 537 NRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
+ D ++++LF +Y R+LDLVK M
Sbjct: 83 GKRKMD----EKANLFKEYLRLLDLVKPKM 108
>gi|218900599|ref|YP_002449010.1| modification methylase HaeIII [Bacillus cereus G9842]
gi|218543463|gb|ACK95857.1| modification methylase HaeIII [Bacillus cereus G9842]
Length = 313
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSG GG ++ + G ++ + ++++++ V ++ + G I D++
Sbjct: 1 MKVISLFSGAGGLDLGFVQAGHQI-----IWANDIDKDAVETYKKNL---GNHIVLKDLK 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++D N I D+VIGG PC + +NR+ G E ++L+ + R++
Sbjct: 53 EVDTNDIPDA-------DIVIGGFPCQGFSVANRNRGTGDE--RNTLYLEMLRVI 98
>gi|420399961|ref|ZP_14899165.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
gi|393019502|gb|EJB20645.1| cytosine-specific methyltransferase [Helicobacter pylori CPY3281]
Length = 351
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 17/121 (14%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVS-VDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
V +F G GG G M + ++++++ + S+ Q N K T D+ Q
Sbjct: 4 VADIFCGAGGLSY-----GFSMHPYFELIWANDIDKDAILSY--QANHKETQTILCDIMQ 56
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNM 565
LD + + + D+++GG PC + + + D ++++LF +Y ++LDLVK
Sbjct: 57 LDCHNLPCV-----SIDILLGGPPCQSYSTLGKRKMD----EKANLFKEYLQLLDLVKPK 107
Query: 566 M 566
M
Sbjct: 108 M 108
>gi|218248203|ref|YP_002373574.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|257060473|ref|YP_003138361.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|218168681|gb|ACK67418.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|256590639|gb|ACV01526.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 460
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 55/114 (48%), Gaps = 17/114 (14%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +AL LG + + SE+++ ++ + + I++ + +
Sbjct: 26 IDLFAGIGGFRIALKSLGGK-----CLGFSEIDKQAIKVY------QHNFINYLTSDERE 74
Query: 508 ANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRIL 559
I Q+ N D+++GG PC ++AG + G E L++D R++
Sbjct: 75 FGDITQIPNLPQNVDIIVGGVPCQPWSVAGQLK----GFEDPRGRLWFDVIRLI 124
>gi|386586472|ref|YP_006082874.1| DNA-cytosine methyltransferase [Streptococcus suis D12]
gi|353738618|gb|AER19626.1| DNA-cytosine methyltransferase [Streptococcus suis D12]
Length = 451
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ S+ N +G I++ D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESQGHECLGFCEIDKFARTSYKAMFNTEGE-IEYHDIK 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
++ + Q G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 EVTDHDFRQFR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|385228214|ref|YP_005788147.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
gi|344334652|gb|AEN15096.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Puno120]
Length = 351
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 477 SEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGS 536
++++++ + S+ Q N K T D+ QL+ + + + D+++GG PC + +
Sbjct: 30 NDIDKDAILSY--QANHKETQTILCDIMQLNCHNLPCV-----SIDILLGGPPCQSYSTL 82
Query: 537 NRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
+ D ++++LF +Y R+LDLVK M
Sbjct: 83 GKRKMD----EKANLFKEYLRLLDLVKPKM 108
>gi|168207191|ref|ZP_02633196.1| modification methylase ScrFIB [Clostridium perfringens E str.
JGS1987]
gi|170661387|gb|EDT14070.1| modification methylase ScrFIB [Clostridium perfringens E str.
JGS1987]
Length = 310
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 21/123 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I +L LF GIG AL LGV +K ++D E+++ VRS+ E + D++
Sbjct: 2 IKILELFGGIGSPRKALVNLGVPVK---AIDYVEIDKKAVRSYNEMFKK--------DLK 50
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
+ + ++ D++I GSPC ++AG + +G G ESSL ++ L+++
Sbjct: 51 Y----KTQSVVGYNLKPDILIHGSPCQSFSIAGKQEGADEG-SGTESSLMWE---TLNII 102
Query: 563 KNM 565
K M
Sbjct: 103 KQM 105
>gi|357633530|ref|ZP_09131408.1| C-5 cytosine-specific DNA methylase [Desulfovibrio sp. FW1012B]
gi|357582084|gb|EHJ47417.1| C-5 cytosine-specific DNA methylase [Desulfovibrio sp. FW1012B]
Length = 253
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V SLFSG G ++A +G+ D R+I+ W D D+
Sbjct: 3 VGSLFSGAGLGDIAAEAIGLSHAWFCECD--PFARSILERRWPGVP---VFHDVRDIHAQ 57
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+A R+ D+VIGG PC +++ + + G+ GK S L+ +Y RIL
Sbjct: 58 NAKRV----------DIVIGGFPCQDISCAGAGA--GITGKRSGLWSEYARIL 98
>gi|416020937|ref|ZP_11566837.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
gi|320321292|gb|EFW77421.1| DNA-cytosine methyltransferase [Pseudomonas syringae pv. glycinea
str. B076]
Length = 410
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+G GG G+R S+ +E++ +++ N T +D D++
Sbjct: 11 LTSLDLFAGAGGLSE-----GLREAGFTSLYANEISPRYAQTYG--ANHPSTHVDNQDIR 63
Query: 505 QLDANRIEQMIN-AFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++DA ++ + + G DL+ GG PC S + E + LF +Y R +
Sbjct: 64 EVDARKVRKSLGLKRGELDLIAGGPPCQGF--SINAPKRSTEDSRNHLFREYLRFV 117
>gi|340754196|ref|ZP_08690959.1| C-5 cytosine-specific DNA methylase [Fusobacterium sp. 2_1_31]
gi|229423724|gb|EEO38771.1| C-5 cytosine-specific DNA methylase [Fusobacterium sp. 2_1_31]
Length = 361
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 10/123 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQTNQKGTLIDFADV 503
+ + LF+G GG + + + G ++ +D + N + R W N+ I ++
Sbjct: 29 LKAIELFAGAGGLALGVEKAGFNTIGLIEIDKNACNTLKLNRPNWNVINENIANISLKNL 88
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ D I++ G DL+ GG+PC A S R GLE +LFY Y L ++
Sbjct: 89 E--DFFSIKK-----GELDLLSGGAPCQ--AFSYAGKRLGLEDTRGTLFYHYALFLKQLQ 139
Query: 564 NMM 566
M
Sbjct: 140 PKM 142
>gi|22538008|ref|NP_688859.1| prophage LambdaSa2, type II DNA modification methyltransferase
[Streptococcus agalactiae 2603V/R]
gi|22534910|gb|AAN00732.1|AE014276_13 prophage LambdaSa2, type II DNA modification methyltransferase,
putative [Streptococcus agalactiae 2603V/R]
Length = 437
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 12/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + E+N+ R+ ++ + I+ D+
Sbjct: 1 MKFLDLFAGIGG-----FRLGMEQAGHECIGFCEINK-FARASYKVIHDTEGEIELHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ ++ I G D++ GG PC A S +R G E +LF++ R +++
Sbjct: 55 RVS----DEFIRGIGSVDVICGGFPCQ--AFSIAGNRRGFEDTRGTLFFEIARFASILR 107
>gi|188575624|ref|YP_001912553.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|188520076|gb|ACD58021.1| DNA (cytosine-5)-methyltransferase PliMCI [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 395
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 10/111 (9%)
Query: 450 LFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDAN 509
+F+G GG G+R S+ +E++ +++ N T +D D++++DA
Sbjct: 1 MFAGAGGLSE-----GLREAGFTSLYANEISPRYAQTY--AANHPATQVDSRDIRKVDAR 53
Query: 510 RIEQMIN-AFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+I ++ G DL+ GG PC S + E + LF +Y R +
Sbjct: 54 KIRNLLGLKRGELDLIAGGPPCQGF--SINAPKRSTEDSRNHLFREYLRFV 102
>gi|157419765|gb|ABV55454.1| DNA methylase [Streptococcus dysgalactiae subsp. equisimilis]
Length = 451
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ S+ N +G I++ D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESQGHKCLGFCEIDKFARTSYKAMFNTEGE-IEYHDIK 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
++ + Q G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 EVTDHDFRQFR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|402300660|ref|ZP_10820134.1| DNA-cytosine methyltransferase [Bacillus alcalophilus ATCC 27647]
gi|401724193|gb|EJS97577.1| DNA-cytosine methyltransferase [Bacillus alcalophilus ATCC 27647]
Length = 349
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 28/121 (23%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF--- 500
G+ + LF+GIGG +A+ G + S W++ Q +F
Sbjct: 13 GMKYVDLFAGIGGFHLAMKSFGAEC--------------VYASEWDKHAQTTYSANFGIH 58
Query: 501 --ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
D+ Q++A+ I Q D++ G PC + S + R G E +LF+D RI
Sbjct: 59 PEGDITQIEASEIPQH-------DILCAGFPCQPFSISGK--RQGFEDTRGTLFFDVARI 109
Query: 559 L 559
+
Sbjct: 110 V 110
>gi|256545597|ref|ZP_05472956.1| modification methylase HaeIII (cytosine-specificmethyltransferase
HaeIII) [Anaerococcus vaginalis ATCC 51170]
gi|256398722|gb|EEU12340.1| modification methylase HaeIII (cytosine-specificmethyltransferase
HaeIII) [Anaerococcus vaginalis ATCC 51170]
Length = 340
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ + G + V +E ++ I ++ + N + LI D+
Sbjct: 1 MKLISLFSGAGGLDLGFQKAGYEI-----VAANEFDKTIWETY--EKNHEAKLIK-GDIF 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ ++ + D +IGG PC + S S G+ LFY Y RIL
Sbjct: 53 KIPSDEFPEC-------DGIIGGPPCQSW--SEAGSLKGINDPRGQLFYQYIRIL 98
>gi|417090983|ref|ZP_11956207.1| putative DNA methylase [Streptococcus suis R61]
gi|353533349|gb|EHC03007.1| putative DNA methylase [Streptococcus suis R61]
Length = 382
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 12/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG + + R G +D R ++ + +F D+
Sbjct: 1 MKFLDLFAGIGGFRLGMERAGHECVGFCEID------QFARKSYKAIHDTEGEFEFHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ ++ + G D++ GG PC + + + R G E +LF+D R +++
Sbjct: 55 AV----ADESVRGIGRVDVICGGFPCQAFSIAGK--RAGFEDTRGTLFFDIARFASILR 107
>gi|158320884|ref|YP_001513391.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
gi|158141083|gb|ABW19395.1| DNA-cytosine methyltransferase [Alkaliphilus oremlandii OhILAs]
Length = 329
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 28/121 (23%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ + G ++ + +E ++ I ++ + N LI D++
Sbjct: 1 MKLISLFSGAGGMDLGFEKAGFKV-----IAANEYDKTIWETY--EKNHNAPLIK-GDIR 52
Query: 505 QLDANRIEQMINAFGGF----DLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRI 558
++ A G F D +IGG PC + AG+ R G+E LFY+Y R+
Sbjct: 53 EI----------ASGDFPDDCDGIIGGPPCQSWSEAGALR----GIEDSRGQLFYEYIRL 98
Query: 559 L 559
L
Sbjct: 99 L 99
>gi|329769727|ref|ZP_08261128.1| hypothetical protein HMPREF0433_00892 [Gemella sanguinis M325]
gi|328838089|gb|EGF87707.1| hypothetical protein HMPREF0433_00892 [Gemella sanguinis M325]
Length = 406
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 62/131 (47%), Gaps = 23/131 (17%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
NV + FSG+GG E+ + + + V + +E+++N ++ + N +D D+ +
Sbjct: 11 NVAAFFSGVGGIELGFEKTN-KFRVVYA---NEIDKNARITY--KLNFPNVFLDPRDIHE 64
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI------- 558
+ I++ D+++GG PC A S R G E + LF++ RI
Sbjct: 65 VKPEEIKEE-----KLDVIVGGFPCQ--AFSIAGYRKGFEDERGDLFFELLRIIKNKKPR 117
Query: 559 ---LDLVKNMM 566
L+ VKNM+
Sbjct: 118 AIFLENVKNMV 128
>gi|443315351|ref|ZP_21044847.1| DNA-methyltransferase Dcm [Leptolyngbya sp. PCC 6406]
gi|442785069|gb|ELR94913.1| DNA-methyltransferase Dcm [Leptolyngbya sp. PCC 6406]
Length = 450
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 13/127 (10%)
Query: 442 PDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTL---- 497
PD VLSLFSG G ++ L G + V ++ +R Q G L
Sbjct: 6 PDQYRVLSLFSGGMGLDLGLEYTG-HFRTVACIEKEPAFCETIR----QNRDAGRLPKDL 60
Query: 498 -IDFADVQQLD-ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDY 555
I AD+ QLD A ++ + D+V+GG PC + + + R R + +L +D+
Sbjct: 61 RILEADLSQLDPAVALDGLGVDPSSIDIVVGGPPCQSFSTAGR--RGTTQDPRGTLLWDF 118
Query: 556 FRILDLV 562
R + +
Sbjct: 119 LRFVSYI 125
>gi|421711053|ref|ZP_16150397.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
gi|407213258|gb|EKE83116.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori R030b]
Length = 355
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 49/117 (41%), Gaps = 8/117 (6%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
+L LF G GG L RL ++ +D + N + N K + D+ Q
Sbjct: 5 ILDLFCGAGGFSTGLERLK-EFSALIGLDCDKQALNTF-----ENNHKNAVGICGDITQT 58
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
D + G +++IGG PC SN+ GL+ + LF +Y I+ +K
Sbjct: 59 DIKEKVIELAKKLGINMIIGGPPCQGF--SNKGKNLGLKDPRNFLFLEYIEIVKAIK 113
>gi|325971313|ref|YP_004247504.1| DNA-cytosine methyltransferase [Sphaerochaeta globus str. Buddy]
gi|324026551|gb|ADY13310.1| DNA-cytosine methyltransferase [Sphaerochaeta globus str. Buddy]
Length = 516
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
VL LF+G GG G V+++ ++ + R ++T ++D++D
Sbjct: 5 VLDLFAGAGGLSQGFKNAG-NFSIAVAIENNKYAQETCRENHKETTMLSDVLDYSDFSDF 63
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRH 539
+G FD+VIGG PC + +NR
Sbjct: 64 KT--------KYGEFDVVIGGPPCQGFSNANRQ 88
>gi|403673689|ref|ZP_10935980.1| site-specific DNA-methyltransferase [Acinetobacter sp. NCTC 10304]
Length = 304
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 17/122 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF---A 501
+N L+LF+G GG +A + LG R V +V+ ++ Q G L F +
Sbjct: 1 MNELALFAGAGGGVLASYLLGWR--TVCAVERDAYAAQVL----AQRQNDGILEAFPIWS 54
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
D+ D + ++ D++ GG PC +++ + + + G+EG+ S L+ + RI+
Sbjct: 55 DITTFDGKPWQGIV------DVISGGFPCQDISSAGKGA--GIEGERSGLWSEMARIIGE 106
Query: 562 VK 563
V+
Sbjct: 107 VR 108
>gi|425451275|ref|ZP_18831097.1| Modification methylase HpaII [Microcystis aeruginosa PCC 7941]
gi|389767477|emb|CCI07114.1| Modification methylase HpaII [Microcystis aeruginosa PCC 7941]
Length = 342
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +AL LG + V S +I ++ + + + G L D D+++L+
Sbjct: 5 IDLFAGIGGFRIALENLGCQC--VFSSEIDPHSQKVYLANY------GHLPDNQDIRKLE 56
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ D++ GG PC + + R + G E +LF++ RIL
Sbjct: 57 VKTVPDH-------DILCGGFPCQAFSIAGR--KHGFEDARGTLFFEVARIL 99
>gi|417353993|ref|ZP_12130548.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
gi|353562966|gb|EHC29443.1| DNA-cytosine methyltransferase [Salmonella enterica subsp. enterica
serovar Gaminara str. A4-567]
Length = 400
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+NV+ LFSG+GG + R G + V +D + + Q N + DV
Sbjct: 18 MNVVDLFSGVGGLSLGAARAGFNLAGAVEIDKHAI-------FSHQLNFPNSAHLKKDVS 70
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+L A I N D VIGG PC + + + D + L+ +FR+++
Sbjct: 71 KLSAQDILAACNV-KEIDCVIGGPPCQGFSSIGKGNAD---DTRNELYVHFFRLVN 122
>gi|365120060|ref|ZP_09337880.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
gi|363647912|gb|EHL87106.1| DNA (cytosine-5-)-methyltransferase [Tannerella sp. 6_1_58FAA_CT1]
Length = 334
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
VL LF G GG G + +D +E Q N K + D+
Sbjct: 8 VLDLFCGCGGISEGYALAGFDIAG--GIDFNEYATITF-----QHNFKKAKVHNIDITTF 60
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
++IE+ +G D+++GG PC + +NR ++ +E + LF++Y R + +
Sbjct: 61 PDSQIEE---EYGDVDVIVGGPPCQGFSSANRWQKE-MEDPRNKLFFEYIRFVQKI 112
>gi|160933407|ref|ZP_02080795.1| hypothetical protein CLOLEP_02253 [Clostridium leptum DSM 753]
gi|156867284|gb|EDO60656.1| DNA (cytosine-5-)-methyltransferase [Clostridium leptum DSM 753]
Length = 382
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 14/117 (11%)
Query: 442 PDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
P I + LFSGIGG L R G V V E+++ +S+ + KG
Sbjct: 2 PKAITYIDLFSGIGGFREGLSRAG----GFVCVGHCEIDKYADQSYRALFDTKGEWFR-E 56
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
DV++ D + + FDL+ GG PC + + + R G +LF++ R+
Sbjct: 57 DVREADPDEMPD-------FDLLCGGFPCQSFSIAGH--RGGFADPRGTLFFEIARL 104
>gi|422024086|ref|ZP_16370586.1| cytosine-specific methyltransferase [Providencia sneebia DSM 19967]
gi|414091279|gb|EKT52966.1| cytosine-specific methyltransferase [Providencia sneebia DSM 19967]
Length = 353
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
NV+ LF G GG + G K V+ +D ++ ++++ + N K D+++
Sbjct: 3 NVVDLFCGCGGLSYGFEQEG--FKTVLGID---HDKAALKTF--KLNHKDAKTILGDIRE 55
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
+ +I +N D+VIGG PC L+ S LE + L+ + RI+ L+
Sbjct: 56 ISNQQILDKLNG-CSIDVVIGGPPCQGLSLSGPRK---LEDPRNQLYLSFIRIVSLL 108
>gi|345007263|ref|YP_004810115.1| DNA-cytosine methyltransferase [halophilic archaeon DL31]
gi|344322889|gb|AEN07742.1| DNA-cytosine methyltransferase [halophilic archaeon DL31]
Length = 598
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 438 KEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTL 497
++M G V+ LFSG GG L + G ++ + +D V R + + +
Sbjct: 161 QQMERTGPTVVDLFSGAGGLSCGLRQAGYDIRWAIDIDTDAVA--TYRLNHPEIPHQNVV 218
Query: 498 IDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDG-------LEGKESS 550
DV+++ N ++ +A DL++GG PC +L+ + SR G L+ ++
Sbjct: 219 C--GDVREV--NLTARIQDAVSELDLLVGGPPCQSLSKAGYRSRRGDDEDYSILDDDRTT 274
Query: 551 LFYDYFRILDLVK 563
L+ Y + ++ ++
Sbjct: 275 LYTQYVKAVEELR 287
>gi|385249206|ref|YP_005777425.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori F57]
gi|387908011|ref|YP_006338345.1| DNA-cytosine methyltransferase [Helicobacter pylori XZ274]
gi|317182001|dbj|BAJ59785.1| cytosine specific DNA methyltransferase (BSP6IM) [Helicobacter
pylori F57]
gi|387572946|gb|AFJ81654.1| DNA-cytosine methyltransferase [Helicobacter pylori XZ274]
Length = 434
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 20/119 (16%)
Query: 445 INVLSLFSGIGGAEVALHR----LGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
+ + LF+G+GG + + +G++ + ++S +I + +++T Q
Sbjct: 29 VRFVDLFAGLGGLRLGFEQASSSIGLKSQCILSSEIKKSALQAYTDHFKETPQ------- 81
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ Q++ N I FD+++ G PC SN R GL+ +LF++ R L
Sbjct: 82 GDITQINTNDIPN-------FDVLLAGFPCQPF--SNAGKRRGLDDTRGTLFFEIMRFL 131
>gi|440756964|ref|ZP_20936164.1| modification methylase HpaII [Microcystis aeruginosa TAIHU98]
gi|440172993|gb|ELP52477.1| modification methylase HpaII [Microcystis aeruginosa TAIHU98]
Length = 347
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +AL LG + V S +I ++ + + + G L D D+++L+
Sbjct: 5 IDLFAGIGGFRIALENLGCQC--VFSSEIDPHSQKVYLANY------GHLPDNQDIRKLE 56
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ D++ GG PC + + R + G E +LF++ RIL
Sbjct: 57 VKTVPDH-------DILCGGFPCQAFSIAGR--KHGFEDARGTLFFEVARIL 99
>gi|288904476|ref|YP_003429697.1| DNA methylase [Streptococcus gallolyticus UCN34]
gi|288731201|emb|CBI12749.1| Putative DNA methylase [Streptococcus gallolyticus UCN34]
Length = 366
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ LF+GIGG + L LG R +D R+ ++ I+F D++
Sbjct: 1 MKFFDLFAGIGGFRMGLESLGHRCVGFCEID------PFARASYKVIYDTEGDIEFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
+ + I G D++ GG PC ++AG+ R G E +LF++ R ++
Sbjct: 55 NVTTD----AIRGIGRVDIICGGFPCQAFSIAGNRR----GFEDTRGTLFFEVARFASIL 106
Query: 563 K 563
+
Sbjct: 107 R 107
>gi|425472619|ref|ZP_18851460.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9701]
gi|389881279|emb|CCI38157.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9701]
Length = 347
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +AL LG + V S +I ++ + + + G L D D+++L+
Sbjct: 5 IDLFAGIGGFRIALENLGCQC--VFSSEIDPHSQKVYLANY------GHLPDNQDIRKLE 56
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ D++ GG PC + + R + G E +LF++ RIL
Sbjct: 57 VKTVPDH-------DILCGGFPCQAFSIAGR--KHGFEDARGTLFFEVARIL 99
>gi|160873497|ref|YP_001552813.1| DNA-cytosine methyltransferase [Shewanella baltica OS195]
gi|378706736|ref|YP_005271630.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
gi|160859019|gb|ABX47553.1| DNA-cytosine methyltransferase [Shewanella baltica OS195]
gi|315265725|gb|ADT92578.1| DNA-cytosine methyltransferase [Shewanella baltica OS678]
Length = 385
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/117 (23%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LFSG GG +A H+ G+ + + +D + + + EQ LI+ D+
Sbjct: 1 MKAIDLFSGAGGLSLAAHQCGIDVIAAIELD-TAASITYRANLIEQLKAPTKLIN-GDIN 58
Query: 505 QLDANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
++D + + + G +L++GG PC + ++R + G++ + L YF +D
Sbjct: 59 EVDLPALMKELKLKSGELELLLGGPPCQGFS-THRINNAGIDDPRNQLLLKYFDFVD 114
>gi|403669254|ref|ZP_10934475.1| hypothetical protein KJC8E_10578 [Kurthia sp. JC8E]
Length = 417
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 59/130 (45%), Gaps = 29/130 (22%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA--- 501
+NV+ LF+G+GG V L + ++ + V + WE + + D
Sbjct: 5 LNVVELFAGVGGFRVGLEKADKKLFDTVWAN-----------QWEPSKKTQDAFDCYNSH 53
Query: 502 ---------DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRD-GLEGKESSL 551
D+ ++ E M DL++GG PC + + + S++ G+EGK+ L
Sbjct: 54 FPSSENCNDDISKVPNKTFEDM-----NIDLLVGGFPCQDYSVARSLSKEKGIEGKKGVL 108
Query: 552 FYDYFRILDL 561
F++ RI+++
Sbjct: 109 FWEIKRIVEV 118
>gi|392331416|ref|ZP_10276031.1| methyl transferase [Streptococcus canis FSL Z3-227]
gi|391419095|gb|EIQ81907.1| methyl transferase [Streptococcus canis FSL Z3-227]
Length = 420
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG R+G+ + + E+++ S+ N +G I++ D++
Sbjct: 1 MKFLDLFAGIGG-----FRMGLEAQGHECLGFCEIDKFARTSYKAMFNTEGE-IEYHDIK 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
++ + Q G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 EVTDHDFRQFR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIVR 102
>gi|390438785|ref|ZP_10227224.1| Modification methylase HpaII [Microcystis sp. T1-4]
gi|389837791|emb|CCI31348.1| Modification methylase HpaII [Microcystis sp. T1-4]
Length = 347
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +AL LG + V S +I ++ + + + G L D D+++L+
Sbjct: 5 IDLFAGIGGFRIALENLGCQC--VFSSEIDPHSQKVYLANY------GHLPDNQDIRKLE 56
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ D++ GG PC + + R + G E +LF++ RIL
Sbjct: 57 VKTVPDH-------DILCGGFPCQAFSIAGR--KHGFEDARGTLFFEVARIL 99
>gi|425451811|ref|ZP_18831630.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 7941]
gi|389766708|emb|CCI07720.1| Modification methylase HgiBI [Microcystis aeruginosa PCC 7941]
Length = 455
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 60/131 (45%), Gaps = 25/131 (19%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQ-- 490
HL + Y + LF+GIGG +AL +LG R + SE+++ ++ + +
Sbjct: 16 HLVITHPQY----RFVDLFAGIGGFRIALEKLGGR-----CLGYSEIDKQAMQVYQQNFI 66
Query: 491 TNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKE 548
++ I F DV ++ N DL++GG PC ++AG R G E
Sbjct: 67 SHLNSDEIAFGDVSKIS--------NLPDNLDLIVGGVPCQPWSVAGCLR----GFEDPR 114
Query: 549 SSLFYDYFRIL 559
L++D +++
Sbjct: 115 GKLWFDVIKLV 125
>gi|339301896|ref|ZP_08650975.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
agalactiae ATCC 13813]
gi|319744643|gb|EFV96990.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
agalactiae ATCC 13813]
Length = 451
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + + E+++ S+ N +G I++ D++
Sbjct: 1 MKFLDLFAGIGG-----FRLGLESQGHKCLGFCEIDKFARTSYKAMFNTEGE-IEYHDIK 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
++ + Q G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 EVTDHDFRQFR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|266624606|ref|ZP_06117541.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM
13479]
gi|288863534|gb|EFC95832.1| DNA (cytosine-5-)-methyltransferase [Clostridium hathewayi DSM
13479]
Length = 434
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 23/118 (19%)
Query: 445 INVLSLFSGIGGAEVALHRLGVR---MKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
I + +LF GIGG A G+R V+ IS R+I ++
Sbjct: 4 ITLGTLFDGIGGFPYAALFYGIRPVWASEVLPTAISVTKRHIPE-----------MVHVG 52
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ +LD ++ + D++ GSPC L+ S R R GL + S LF + RI+
Sbjct: 53 DITKLDGRKLPPV-------DIITFGSPCQGLSISGR--RLGLADERSGLFSEAIRII 101
>gi|355629761|ref|ZP_09050532.1| hypothetical protein HMPREF1020_04611 [Clostridium sp. 7_3_54FAA]
gi|365132575|ref|ZP_09342219.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum sp.
4_3_54A2FAA]
gi|354818909|gb|EHF03367.1| hypothetical protein HMPREF1020_04611 [Clostridium sp. 7_3_54FAA]
gi|363616515|gb|EHL67951.1| DNA (cytosine-5-)-methyltransferase [Subdoligranulum sp.
4_3_54A2FAA]
Length = 434
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 23/118 (19%)
Query: 445 INVLSLFSGIGGAEVALHRLGVR---MKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
I + +LF GIGG A G+R V+ IS R+I ++
Sbjct: 4 ITLGTLFDGIGGFPYAALFYGIRPVWASEVLPTAISVTKRHIPE-----------MVHVG 52
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ +LD ++ + D++ GSPC L+ S R R GL + S LF + RI+
Sbjct: 53 DITKLDGRKLPPV-------DIITFGSPCQGLSISGR--RLGLADERSGLFSEAIRII 101
>gi|425442125|ref|ZP_18822382.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9717]
gi|389716960|emb|CCH98858.1| Modification methylase HpaII [Microcystis aeruginosa PCC 9717]
Length = 347
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG +AL LG + V S +I ++ + + + G L D D+++L+
Sbjct: 5 IDLFAGIGGFRIALENLGCQC--VFSSEIDPHSQKVYLANY------GHLPDNQDIRKLE 56
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ D++ GG PC + + R + G E +LF++ RIL
Sbjct: 57 VKTVPDH-------DIMCGGFPCQAFSIAGR--KHGFEDARGTLFFEVARIL 99
>gi|350422372|ref|XP_003493144.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Bombus
impatiens]
Length = 1368
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 24/140 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L +F+G GG LH+ G+ +N+ +++ E N R N T + D
Sbjct: 894 LKTLDVFAGCGGLSEGLHQAGI-AENLWAIEKEEAAANAYR-----LNNPNTTVFTDDCN 947
Query: 505 QL--------DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSL----- 551
L N I Q + G +L+ GG PC +G NR + ++SL
Sbjct: 948 ILLKKVMDGETTNEIGQKLPQKGQVELLCGGPPCQGFSGMNRFNSRQYSLFKNSLVVSYL 1007
Query: 552 -FYDYFR----ILDLVKNMM 566
+ DY+R I++ V+N +
Sbjct: 1008 SYCDYYRPNFFIMENVRNFV 1027
>gi|163755904|ref|ZP_02163021.1| modification methylase (Eco47II, Sau96I) [Kordia algicida OT-1]
gi|161324075|gb|EDP95407.1| modification methylase (Eco47II, Sau96I) [Kordia algicida OT-1]
Length = 413
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 27/122 (22%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
VL LF+G GG + L + G++ V ++E+++ W QT ++ +
Sbjct: 77 VLELFAGAGGLAIGLEKAGIK-----CVALNEIDK-----WACQTLRE---------NRP 117
Query: 507 DANRIEQMINAF------GGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
D N +E I +F ++V GG PC + + + R GLE +LFY++ R++
Sbjct: 118 DWNVLEGNIKSFDFSKYKDKVEIVTGGFPCQAFSYAGK--RLGLEDARGTLFYEFARVVK 175
Query: 561 LV 562
V
Sbjct: 176 EV 177
>gi|421148127|ref|ZP_15607793.1| DNA (cytosine-5-)-methyltransferase [Streptococcus agalactiae
GB00112]
gi|401685103|gb|EJS81117.1| DNA (cytosine-5-)-methyltransferase [Streptococcus agalactiae
GB00112]
Length = 333
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+G GG + + + G +V D S + + + + N D A++ +LD
Sbjct: 4 IELFAGAGGLALGIEKAGFDTIGLVEFD-SAASETLK---YNRPNWNVIHDDVANISKLD 59
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
E + G DL+ GG+PC + + + + R GLE +LFY Y L+ ++ M
Sbjct: 60 LE--EYFLIKKGELDLLSGGAPCQSFSYAGK--RLGLEDTRGTLFYHYAVFLEKLQPKM 114
>gi|348536610|ref|XP_003455789.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase-like
[Oreochromis niloticus]
Length = 382
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 37/134 (27%)
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVR------SWWEQTNQKGT 496
D + VL L+SGIGG AL G+ + V ++DI+ + + + W +T + T
Sbjct: 2 DNLRVLELYSGIGGMHYALKESGIPAQVVTAIDINTTANQVYKHNFPDTALWNKTIEGIT 61
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEG-----KESSL 551
L +F + FD+++ PC +R GL+G + S
Sbjct: 62 LDEFNKL----------------SFDMILMSPPCQPF------TRIGLQGDVTDPRTKSF 99
Query: 552 FYDYFRILDLVKNM 565
Y ILDL+ +
Sbjct: 100 LY----ILDLLPRL 109
>gi|448332896|ref|ZP_21522116.1| DNA-cytosine methyltransferase [Natrinema pellirubrum DSM 15624]
gi|445624740|gb|ELY78115.1| DNA-cytosine methyltransferase [Natrinema pellirubrum DSM 15624]
Length = 477
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 13/122 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LF+G GG L G M+ ++D +E R + + + +D++
Sbjct: 46 LTAIDLFAGAGGFSCGLAHSGFDMQ--WAIDFNEYATATYRLNHPEIPHRNIVC--SDIR 101
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSR-------DGLEGKESSLFYDYFR 557
+ DA EQ+ + G DLV+GG PC +L+ + SR L+ + +SL+ +Y
Sbjct: 102 ETDA--AEQIRSTVGEPDLVVGGPPCQSLSLAGYRSRLAADDDYSTLDDERTSLYEEYLD 159
Query: 558 IL 559
I+
Sbjct: 160 II 161
>gi|15611502|ref|NP_223153.1| type II DNA modification (methyltransferase [Helicobacter pylori
J99]
gi|4154963|gb|AAD06007.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter
pylori J99]
Length = 351
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 477 SEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGS 536
++++++ + S+ Q N K T D+ QL + + ++ D+++GG PC + +
Sbjct: 30 NDIDKDAILSY--QANHKETQTILCDIAQLHCHNLPRV-----PIDILLGGPPCQSYSTL 82
Query: 537 NRHSRDGLEGKESSLFYDYFRILDLVK 563
+ D ++++LF +Y RILDLVK
Sbjct: 83 GKRKMD----EKANLFKEYLRILDLVK 105
>gi|420404369|ref|ZP_14903552.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6261]
gi|393018248|gb|EJB19399.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6261]
Length = 434
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 20/119 (16%)
Query: 445 INVLSLFSGIGGAEVALHR----LGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
+ + LF+G+GG + + +G++ + ++S +I + +++T Q
Sbjct: 29 VRFVDLFAGLGGLRLGFEQASSSIGLKSQCILSSEIKKSALQAYTDHFKETPQ------- 81
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ Q++ N I FD+++ G PC SN R GL+ +LF++ R L
Sbjct: 82 GDITQINTNDIPN-------FDVLLAGFPCQPF--SNAGKRRGLDDTRGTLFFEIMRFL 131
>gi|160934346|ref|ZP_02081733.1| hypothetical protein CLOLEP_03217 [Clostridium leptum DSM 753]
gi|156867019|gb|EDO60391.1| DNA (cytosine-5-)-methyltransferase [Clostridium leptum DSM 753]
Length = 433
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR-NIVRSWWEQTNQKGTLIDFADV 503
+ + LF+G GG + + G ++ D + + R W N D A++
Sbjct: 101 FSTIELFAGAGGLALGIEEAGFDTIGLIEFDKAASDTLKCNRPNWRVIND-----DIANI 155
Query: 504 QQLDANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
LD +E+ N G DL+ GG+PC + + + R GLE +LFY Y + L+ +
Sbjct: 156 SCLD---LEEYFNIKKGELDLLSGGAPCQAFSYAGK--RLGLEDARGTLFYHYAKFLEQL 210
Query: 563 KNMM 566
+ M
Sbjct: 211 QPKM 214
>gi|417937475|ref|ZP_12580775.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK970]
gi|343391739|gb|EGV04312.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK970]
Length = 364
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 55/120 (45%), Gaps = 12/120 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+NV+ LFSG GG + + G + V D S I ++ + N G + D+
Sbjct: 1 MNVIDLFSGAGGLSLGFIKDGHTVTKAVEFDDS-----IAHTY--KMNHPGVEVIIDDIA 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDG-LEGKESSLFYDYFRILDLVK 563
+D + + + G ++IGG PC + + R+G ++ + LF YF ++ VK
Sbjct: 54 NIDKSGVFKE----GDASIIIGGPPCQGFSMAGARIRNGFMDDPRNYLFKHYFNVVKTVK 109
>gi|288927044|ref|ZP_06420936.1| site-specific DNA-methyltransferase [Prevotella buccae D17]
gi|288336182|gb|EFC74571.1| site-specific DNA-methyltransferase [Prevotella buccae D17]
Length = 385
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I SLFSGIG E+A H +G KN+ +I E R ++ W+ + + + D+
Sbjct: 5 ITHASLFSGIGAPELAAHWMG--WKNLFHCEIQEFQRKVLEYWFPNS------VSYEDIT 56
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRD 542
+ D G D++ GG PC ++AG + D
Sbjct: 57 KTD------FTEWRGKVDILTGGFPCQPFSVAGKRLGAED 90
>gi|385221953|ref|YP_005771086.1| type II DNA modification (methyltransferase) [Helicobacter pylori
SouthAfrica7]
gi|317010732|gb|ADU84479.1| type II DNA modification (methyltransferase) [Helicobacter pylori
SouthAfrica7]
Length = 348
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 477 SEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGS 536
++++++ + S+ Q N K T D+ QLD + D+++GG PC + +
Sbjct: 30 NDIDKDAILSY--QANHKETQTILCDIAQLDCYNLPCT-----SIDILLGGPPCQSYSTL 82
Query: 537 NRHSRDGLEGKESSLFYDYFRILDLVK 563
+ D ++++LF +Y R+LDLVK
Sbjct: 83 GKRKMD----EKANLFKEYLRLLDLVK 105
>gi|421205706|ref|ZP_15662773.1| modification methylase HpaII domain protein [Streptococcus
pneumoniae 2090008]
gi|395578127|gb|EJG38655.1| modification methylase HpaII domain protein [Streptococcus
pneumoniae 2090008]
Length = 181
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + E+++ S+ N KG I+ D+
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESAGHKCIGFCEIDKFARESYKAIHNTKGE-IELHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
+ ++ I G D++ GG PC ++AG+ R G E +LF++ R ++
Sbjct: 55 AVS----DESIRGIGSVDIICGGFPCQAFSIAGNRR----GFEDTRGTLFFEIARFASIL 106
Query: 563 K 563
+
Sbjct: 107 R 107
>gi|392392195|ref|YP_006428797.1| DNA-methyltransferase Dcm [Desulfitobacterium dehalogenans ATCC
51507]
gi|390523273|gb|AFL99003.1| DNA-methyltransferase Dcm [Desulfitobacterium dehalogenans ATCC
51507]
Length = 359
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 17/121 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ +SLF+G GG +V GV + +D+ I N T++ +
Sbjct: 1 MRAVSLFAGAGGMDVGFSDAGVSIVWANELDLDAAQTYI-------KNNPDTML-----R 48
Query: 505 QLDANRIEQMINAF--GGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
Q D R+++ + F G DLV GG PC + + + D + S L ++Y +++++
Sbjct: 49 QGDIKRLKEELQQFDEGSIDLVFGGPPCQGFSVAGKMDPD---DERSKLIWEYMDVVNIL 105
Query: 563 K 563
K
Sbjct: 106 K 106
>gi|228473386|ref|ZP_04058140.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga
gingivalis ATCC 33624]
gi|228275288|gb|EEK14086.1| Cytosine-specific methyltransferase HphIA [Capnocytophaga
gingivalis ATCC 33624]
Length = 358
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 59/116 (50%), Gaps = 11/116 (9%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ +FSG GG LG M + E+N + +S+ N KG + D++ +D
Sbjct: 5 IDIFSGAGGLS-----LGAEMAGIQICYGIEINPSAAKSF--TRNHKGAKVLQGDIKDID 57
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+++++ I+ +++GG PC + SN +R+ ++ + + LF ++ R + +K
Sbjct: 58 PSKLKEGIDPVF---IIMGGPPCQGFSLSNTRTRN-MQNENNFLFLEFVRFVQELK 109
>gi|46580156|ref|YP_010964.1| C-5 cytosine-specific DNA methylase [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153409|ref|YP_005702345.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
gi|46449573|gb|AAS96223.1| C-5 cytosine-specific DNA methylase family protein [Desulfovibrio
vulgaris str. Hildenborough]
gi|311233853|gb|ADP86707.1| DNA-cytosine methyltransferase [Desulfovibrio vulgaris RCH1]
Length = 369
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 55/118 (46%), Gaps = 4/118 (3%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
+ LF G GG +A LG+ + V +++ + R + + +++ L+ D+ +
Sbjct: 13 AVDLFCGAGGFSLAARNLGIEV--VAALENNHYAAATYRHNFIEGSRRPPLLFEGDILAI 70
Query: 507 DANRIEQMINAF-GGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
Q N GG D+++GG PC + ++R G++ ++L YF + ++
Sbjct: 71 SPEAFMQAANLTPGGVDIIMGGPPCQGFS-THRIKGAGIDDPRNTLLLRYFEYVQAIR 127
>gi|406997686|gb|EKE15708.1| hypothetical protein ACD_11C00108G0002 [uncultured bacterium]
Length = 326
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 24/119 (20%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWE--QTNQKGTLIDFAD 502
+ + SLF+G GG ++ + G + V +E + I WE + N T +D
Sbjct: 1 MKIASLFTGAGGLDLGFEKAGFHV-----VWANEYDPTI----WETFEYNFPKTKLDKRS 51
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
+ + A+ I + D +IGG PC + AG+ R G+ K LFYDY R+L
Sbjct: 52 IVDVPASEIPDV-------DGIIGGPPCQSWSEAGAGR----GINDKRGKLFYDYIRLL 99
>gi|406905896|gb|EKD47227.1| hypothetical protein ACD_66C00167G0008 [uncultured bacterium]
Length = 319
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 13/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LF+GIGG ++ G + V S D E + + + + + D+Q
Sbjct: 1 MKFIDLFAGIGGIKIGFENAGFQC--VFSNDFDENAKITFDLNFSELFETEKQMVLGDIQ 58
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ A++I FD++ GG PC ++AG + D E +LF+D RIL
Sbjct: 59 KISASKIPD-------FDILCGGFPCQPFSIAGYKQGFND--EKDRGNLFFDIVRIL 106
>gi|296453364|ref|YP_003660507.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
longum JDM301]
gi|384196400|ref|YP_005582144.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium breve
ACS-071-V-Sch8b]
gi|296182795|gb|ADG99676.1| DNA-cytosine methyltransferase [Bifidobacterium longum subsp.
longum JDM301]
gi|333109600|gb|AEF26616.1| DNA (cytosine-5-)-methyltransferase [Bifidobacterium breve
ACS-071-V-Sch8b]
Length = 392
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 16/120 (13%)
Query: 447 VLSLFSGIGGAEVALHRLG--VRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
L F+GIG A + L G V N + E+ RN T+ G + D+
Sbjct: 17 ALEFFAGIGLARLGLEEAGFQVEWSNDIDAAKCEMYRNNF------TDTPGHTLVEGDMS 70
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
+L + + + + G SPC +L+ + +R GL GK+S F+ Y R+L+ + N
Sbjct: 71 ELSGDDLPHDAS------IAWGSSPCTDLSLAG--TRTGLNGKQSGAFWQYVRLLEELGN 122
>gi|392397795|ref|YP_006434396.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
gi|390528873|gb|AFM04603.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
Length = 321
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 47/114 (41%), Gaps = 22/114 (19%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF--ADVQQ 505
+ LF GIGG +A LG V S DI + + T K DF D+ +
Sbjct: 4 IDLFCGIGGFRIAFEELGGEC--VFSADIDK---------YACTTYKDNFGDFPLRDITK 52
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+D N I FD++ G PC + R G E +LF+D RIL
Sbjct: 53 VDENEIPN-------FDILCAGFPCQPFSIGGL--RKGFEDIRGTLFFDIERIL 97
>gi|332665156|ref|YP_004447944.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
gi|332333970|gb|AEE51071.1| DNA-cytosine methyltransferase [Haliscomenobacter hydrossis DSM
1100]
Length = 416
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVR----SWW------EQTNQKG 495
NV+SLFSG GG ++ L + G R V D++ R +R W + N+K
Sbjct: 28 NVVSLFSGAGGLDIGLEQAGFRTAVCVENDLN--CRTTLRHNRPEWLLFDHPTKVLNEKI 85
Query: 496 TLIDFADVQQLDANRIEQMINAF-GGFDLVIGGSPCNNLAGSNRHSRDGL-EGKESSLFY 553
D++ +DA + + G LV+GG+PC SN ++G + K LF
Sbjct: 86 ITRAPGDIRHIDAEELLEFAGLKPGKVALVVGGAPCQPF--SNIGKKEGENDAKNGDLFL 143
Query: 554 DYFRIL 559
++ R++
Sbjct: 144 EFVRMV 149
>gi|325288242|ref|YP_004264423.1| C-5 cytosine-specific DNA methylase [Syntrophobotulus glycolicus
DSM 8271]
gi|324963643|gb|ADY54422.1| C-5 cytosine-specific DNA methylase [Syntrophobotulus glycolicus
DSM 8271]
Length = 719
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 384 GRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNS-------FQVDTVAYHLSV 436
GRN + L P E E L GFP T G S + RYK+LGNS F + +AY L +
Sbjct: 643 GRNLIRRLTPLECERLQGFPDGWTLIPGASDSARYKALGNSVAIPCVDFVLRGIAYFLRI 702
Query: 437 LKE 439
+ E
Sbjct: 703 IHE 705
>gi|225691140|gb|ACO06242.1| 5'-methylcytosine methyltransferase M.BbrI [Bifidobacterium breve
UCC2003]
gi|339478470|gb|ABE94925.1| Modification methylase [Bifidobacterium breve UCC2003]
Length = 392
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 16/120 (13%)
Query: 447 VLSLFSGIGGAEVALHRLG--VRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
L F+GIG A + L G V N + E+ RN T+ G + D+
Sbjct: 17 ALEFFAGIGLARLGLEEAGFQVEWSNDIDAAKCEMYRNNF------TDTPGHTLVEGDMS 70
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
+L + + + + G SPC +L+ + +R GL GK+S F+ Y R+L+ + N
Sbjct: 71 ELSGDDLPHDAS------IAWGSSPCTDLSLAG--TRTGLNGKQSGAFWQYVRLLEELGN 122
>gi|421765734|ref|ZP_16202515.1| DNA-cytosine methyltransferase [Lactococcus garvieae DCC43]
gi|407625819|gb|EKF52507.1| DNA-cytosine methyltransferase [Lactococcus garvieae DCC43]
Length = 407
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 54/115 (46%), Gaps = 17/115 (14%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ-- 504
V S F G+GG ++ + K SV I+E ++N Q+ ++F DV+
Sbjct: 14 VASFFGGVGGIDLGFEQ----TKKFSSVFINEFDKNA---------QETISLNFPDVKLD 60
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ D + ++ N D++IGG PC A S R G + LF++ +RI+
Sbjct: 61 RRDIHVVDTETNDVPDTDVIIGGFPCQ--AFSIAGYRKGFSDERGDLFFELYRII 113
>gi|239624728|ref|ZP_04667759.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
1_7_47_FAA]
gi|239521114|gb|EEQ60980.1| DNA (cytosine-5-)-methyltransferase [Clostridiales bacterium
1_7_47FAA]
Length = 554
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 10/94 (10%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
NV+ LF+G GG + + G V + +E N N R +++ + L ++DV+
Sbjct: 24 NVIDLFAGAGGLSLGFKQTG----QVKIIAAAENNLN-ARKTYKRNFKLARL--YSDVRT 76
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRH 539
+D ++ + G D+VIGG PC + +NR
Sbjct: 77 IDYAELQDTV---GPVDIVIGGPPCQGFSNANRQ 107
>gi|420413687|ref|ZP_14912810.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|420418627|ref|ZP_14917719.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
gi|393028216|gb|EJB29303.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4099]
gi|393033453|gb|EJB34516.1| cytosine-specific methyltransferase [Helicobacter pylori NQ4076]
Length = 434
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 55/119 (46%), Gaps = 20/119 (16%)
Query: 445 INVLSLFSGIGGAEVALHR----LGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
+ + LF+G+GG + + +G++ + ++S +I + +++T Q
Sbjct: 29 VRFVDLFAGLGGLRLGFEQASSNIGLKSQCILSSEIKKSALQAYTDHFKETPQ------- 81
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ Q++ N I FD+++ G PC SN R GL+ +LF++ R L
Sbjct: 82 GDITQINTNDIPN-------FDVLLAGFPCQPF--SNAGKRRGLDDTRGTLFFEIMRFL 131
>gi|325268581|ref|ZP_08135211.1| prophage LambdaBa01 protein [Prevotella multiformis DSM 16608]
gi|324989109|gb|EGC21062.1| prophage LambdaBa01 protein [Prevotella multiformis DSM 16608]
Length = 444
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 14/95 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I SLFSGIG E+A LG +NV +I+E I+ W+ + I++ +++
Sbjct: 5 IRHASLFSGIGAPELAALWLG--WQNVFHCEINEFCNTILNYWFPNS------INYENIK 56
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRH 539
D +R + G D++ GG PC + + R
Sbjct: 57 TTDFSRWQ------GQIDILTGGFPCQPFSSAGRR 85
>gi|414072910|ref|ZP_11408819.1| DNA (cytosine-5-)-methyltransferase [Pseudoalteromonas sp.
Bsw20308]
gi|410804668|gb|EKS10724.1| DNA (cytosine-5-)-methyltransferase [Pseudoalteromonas sp.
Bsw20308]
Length = 392
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 15/129 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVN---RNIVRSWWEQTNQKGTLIDFA 501
+ + LFSG GG +A H +G + V D N RNIV T+ +
Sbjct: 4 LTAIDLFSGAGGFSLAAHEVGFDILAAVEFDQHAANTYQRNIVERLGANTH-----VYAE 58
Query: 502 DVQQL--DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ L DA E+ + + G DL++GG PC + ++R G + + L YF
Sbjct: 59 DIMPLNIDALMSEKGLKS-GDLDLLLGGPPCQGFS-THRIKGRGEDDPRNQLLLRYF--- 113
Query: 560 DLVKNMMQR 568
D V+ +M +
Sbjct: 114 DFVEKLMPK 122
>gi|421907207|ref|ZP_16337092.1| Cytosine-specific methyltransferase NlaX [Neisseria meningitidis
alpha704]
gi|393291724|emb|CCI73079.1| Cytosine-specific methyltransferase NlaX [Neisseria meningitidis
alpha704]
Length = 236
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 522 DLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
D+++GG PC +++ + + R GL G+ + LFYD RI+D +K
Sbjct: 26 DVIVGGFPCQDVSTAGK--RRGLAGERTGLFYDAMRIVDTLK 65
>gi|255553977|ref|XP_002518029.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
gi|223543011|gb|EEF44547.1| DNA (cytosine-5)-methyltransferase, putative [Ricinus communis]
Length = 1542
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 30/155 (19%)
Query: 445 INVLSLFSGIGGAEVALHRLGV-----------------RMKNVVSVDISEVNRNIVRSW 487
+ L +FSG GG L + GV ++ + S+ I+R+
Sbjct: 1106 LATLDIFSGCGGLSEGLQQAGVSSTKWAIEYEEPAGEAFKLNHPESLVFINNCNVILRAV 1165
Query: 488 WEQTNQKGTLIDFADVQQLDANRIEQMINAF---GGFDLVIGGSPCNNLAGSNRHSRDGL 544
E+ I ++ +L A+ E++IN G D + GG PC +G NR S+
Sbjct: 1166 MEKCGDTDDCISTSEAIELAASLDEKIINDLPLPGQVDFINGGPPCQGFSGMNRFSQSTW 1225
Query: 545 EGKESSL------FYDYFR----ILDLVKNMMQRN 569
+ + F DYFR +L+ V+N + N
Sbjct: 1226 SKVQCEMILAFLSFADYFRPKYFLLENVRNFVSFN 1260
>gi|445406201|ref|ZP_21431716.1| C-5 cytosine-specific DNA methylase domain protein [Acinetobacter
baumannii Naval-57]
gi|444781649|gb|ELX05565.1| C-5 cytosine-specific DNA methylase domain protein [Acinetobacter
baumannii Naval-57]
Length = 304
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF---A 501
+N LSLF+G GG +A + LG R V D + Q G L F +
Sbjct: 1 MNELSLFAGAGGGILASYLLGWRTVCAVERDAYAAQ------FLAQRQNDGILEAFPIWS 54
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
D+ D ++ D++ GG PC +++ + + + G+EG+ S L+ + RI+
Sbjct: 55 DITSFDGKPWRGIV------DVISGGFPCQDISSAGKGA--GIEGERSGLWAEMARIIGE 106
Query: 562 VK 563
V+
Sbjct: 107 VR 108
>gi|420453298|ref|ZP_14952137.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-8]
gi|393070906|gb|EJB71695.1| cytosine-specific methyltransferase [Helicobacter pylori Hp A-8]
Length = 269
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 477 SEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGS 536
++++++ + S+ Q N K T D+ QL + + ++ D+++GG PC + +
Sbjct: 30 NDIDKDAILSY--QANHKETQTILCDIAQLHCHNLPRV-----PIDILLGGPPCQSYSTL 82
Query: 537 NRHSRDGLEGKESSLFYDYFRILDLVK 563
+ D ++++LF +Y RILDLVK
Sbjct: 83 GKRKMD----EKANLFKEYLRILDLVK 105
>gi|422883901|ref|ZP_16930350.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
sanguinis SK49]
gi|332361999|gb|EGJ39801.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
sanguinis SK49]
Length = 480
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LFSGIGG + + +G +D R ++ Q I+F D++
Sbjct: 29 MKFIDLFSGIGGFRLGMESVGHECIGFCEID------KFARESYKSIFQTEGEIEFHDIR 82
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
+ + +++ G D++ GG PC + + R R G E +LF++ R
Sbjct: 83 DVSDDEFKKLR---GKVDIICGGFPCQAFSIAGR--RLGFEDTRGTLFFEIAR 130
>gi|15901190|ref|NP_345794.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
pneumoniae TIGR4]
gi|418091962|ref|ZP_12729104.1| modification methylase HpaII [Streptococcus pneumoniae GA44452]
gi|418110308|ref|ZP_12747331.1| modification methylase HpaII [Streptococcus pneumoniae GA49447]
gi|418162396|ref|ZP_12799079.1| modification methylase HpaII [Streptococcus pneumoniae GA17328]
gi|418201916|ref|ZP_12838347.1| modification methylase HpaII [Streptococcus pneumoniae GA52306]
gi|419431719|ref|ZP_13971858.1| modification methylase HpaII [Streptococcus pneumoniae EU-NP05]
gi|419453511|ref|ZP_13993483.1| modification methylase HpaII [Streptococcus pneumoniae EU-NP03]
gi|419460167|ref|ZP_14000096.1| modification methylase HpaII [Streptococcus pneumoniae GA02270]
gi|419462499|ref|ZP_14002405.1| modification methylase HpaII [Streptococcus pneumoniae GA02714]
gi|419489566|ref|ZP_14029315.1| modification methylase HpaII [Streptococcus pneumoniae GA44386]
gi|14972819|gb|AAK75434.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
pneumoniae TIGR4]
gi|353764062|gb|EHD44612.1| modification methylase HpaII [Streptococcus pneumoniae GA44452]
gi|353782511|gb|EHD62945.1| modification methylase HpaII [Streptococcus pneumoniae GA49447]
gi|353827368|gb|EHE07520.1| modification methylase HpaII [Streptococcus pneumoniae GA17328]
gi|353868598|gb|EHE48484.1| modification methylase HpaII [Streptococcus pneumoniae GA52306]
gi|379531172|gb|EHY96407.1| modification methylase HpaII [Streptococcus pneumoniae GA02270]
gi|379531970|gb|EHY97203.1| modification methylase HpaII [Streptococcus pneumoniae GA02714]
gi|379587108|gb|EHZ51958.1| modification methylase HpaII [Streptococcus pneumoniae GA44386]
gi|379626244|gb|EHZ90864.1| modification methylase HpaII [Streptococcus pneumoniae EU-NP03]
gi|379629969|gb|EHZ94561.1| modification methylase HpaII [Streptococcus pneumoniae EU-NP05]
Length = 407
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VL LF+GIGG R+G+ + + E+++ R ++ Q I+F D++
Sbjct: 2 IWVLDLFAGIGG-----FRMGMEAQGHECLGFCEIDK-FARKSYKSIFQTEGEIEFHDIR 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
+ + +++ G D++ GG PC + + R R G E +LF++ R
Sbjct: 56 DVSDDEFKKLR---GKVDVICGGFPCQAFSIAGR--RLGFEDTRGTLFFEIAR 103
>gi|307277185|ref|ZP_07558289.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX2134]
gi|306506115|gb|EFM75281.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX2134]
Length = 429
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 31/133 (23%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD-- 502
+NVL LF+G+GG R+G+ N N+ WE + + + D
Sbjct: 9 LNVLELFAGVGG-----FRVGLEHSNADLFKTKWANQ------WEPSRKSQDAFEVYDYR 57
Query: 503 ----------VQQLDANRIEQMINAFGGFDLVIGGSPCNN--LAGSNRHSRDGLEGKESS 550
++++ EQM D+++GG PC + +A S +H G+EGK+
Sbjct: 58 FPNSENINRNIEEISNEEFEQM-----DADIIVGGFPCQDYSVARSKKHEM-GIEGKKGV 111
Query: 551 LFYDYFRILDLVK 563
LF+ R + +K
Sbjct: 112 LFWQIIRATNHIK 124
>gi|420402021|ref|ZP_14901212.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
gi|393017840|gb|EJB18992.1| cytosine-specific methyltransferase [Helicobacter pylori CPY6081]
Length = 188
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 477 SEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGS 536
++++++ + S+ Q N K T D+ QL+ + + + D+++GG PC + +
Sbjct: 30 NDIDKDAILSY--QANHKKTQTILCDIMQLNCHNLPCV-----SIDILLGGPPCQSYSTL 82
Query: 537 NRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
+ D ++++LF +Y R+LDLVK M
Sbjct: 83 GKRKMD----EKANLFKEYLRLLDLVKPKM 108
>gi|282859944|ref|ZP_06269032.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010]
gi|424899947|ref|ZP_18323489.1| DNA-methyltransferase Dcm [Prevotella bivia DSM 20514]
gi|282587347|gb|EFB92564.1| DNA (cytosine-5-)-methyltransferase [Prevotella bivia JCVIHMP010]
gi|388592147|gb|EIM32386.1| DNA-methyltransferase Dcm [Prevotella bivia DSM 20514]
Length = 448
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 20/117 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ LF+GIGG +A+ LG R + S W+ QK +++ +V
Sbjct: 114 FTFIDLFAGIGGFRMAMQNLG--------------GRCVFSSEWDIQAQKTYFLNYGEVP 159
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D + FD++ G PC +LAG R G E +LF+D I+
Sbjct: 160 FGDITQERTKAYIPDHFDILCAGFPCQAFSLAG----KRLGFEETRGTLFFDVAEII 212
>gi|1399076|gb|AAB03209.1| NgoII cytosine methylase M.NgoII [Neisseria gonorrhoeae]
Length = 341
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ + G + +E ++ I ++ + N T + D++
Sbjct: 12 MKIISLFSGCGGLDLGFEKAGFEIPAA-----NEYDKTIWATF--KANHPKTHLIEGDIR 64
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + I D +IGG PC + AG+ R G++ LF+DY RIL
Sbjct: 65 KIKEEDFPEEI------DGIIGGPPCQSWSEAGALR----GIDDARGQLFFDYIRIL 111
>gi|335437820|ref|ZP_08560578.1| site-specific DNA-methyltransferase (cytosine-specific)
[Halorhabdus tiamatea SARL4B]
gi|335438109|ref|ZP_08560859.1| site-specific DNA-methyltransferase (cytosine-specific)
[Halorhabdus tiamatea SARL4B]
gi|334892798|gb|EGM31025.1| site-specific DNA-methyltransferase (cytosine-specific)
[Halorhabdus tiamatea SARL4B]
gi|334893981|gb|EGM32189.1| site-specific DNA-methyltransferase (cytosine-specific)
[Halorhabdus tiamatea SARL4B]
Length = 373
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 445 INVLSLFSGIGGAEVALHRL-GVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
+ + LFSG GGA + +HR+ GV ++ +E+N + + K ++ AD+
Sbjct: 3 LTAVDLFSGGGGASLGIHRVDGVELQGA-----AEINEEVREHY-----NKNLPVEAADI 52
Query: 504 QQLDANRIEQMINAFG----GFDLVIGGSPC 530
D + + Q+ + +G DLVIG PC
Sbjct: 53 DLTDDDALNQICSKYGLEPEDIDLVIGCPPC 83
>gi|289422787|ref|ZP_06424624.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus anaerobius
653-L]
gi|289156786|gb|EFD05414.1| DNA (cytosine-5-)-methyltransferase [Peptostreptococcus anaerobius
653-L]
Length = 536
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 14/119 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDIS-EVNRNIVRSWWEQTNQKGTLIDFADV 503
N + LF+G GG LG + ++ E N ++ ++ + N G + F DV
Sbjct: 2 FNTIDLFAGAGGLS-----LGFMQTKKFDIKVAYEFNPSMQETY--KKNHPGVAV-FGDV 53
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR-ILDL 561
+ DAN E + +G D+VIGG PC + +NR + + +SL Y R IL+L
Sbjct: 54 R--DANYAE-IKEKYGDIDVVIGGPPCQGFSNANRQKNHAI-SQNNSLVKQYIRAILEL 108
>gi|212710423|ref|ZP_03318551.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens DSM
30120]
gi|212686843|gb|EEB46371.1| hypothetical protein PROVALCAL_01485 [Providencia alcalifaciens DSM
30120]
Length = 330
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 20/119 (16%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
++S F+G GG ++ + G NV+ + E +++I ++ + N T +D + +
Sbjct: 5 IVSFFAGAGGLDLGFEQAGF---NVIWAN--EFDKDIWATY--KKNHPHTELDQRSITNI 57
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ + + D +IGG PC + AG+ R G+ K LF+D+ RIL+ K
Sbjct: 58 TSDEVPEC-------DGIIGGPPCQSWSEAGAQR----GINDKRGQLFFDFIRILEAKK 105
>gi|309808410|ref|ZP_07702309.1| putative modification methylase HhaI [Lactobacillus iners LactinV
01V1-a]
gi|308168238|gb|EFO70357.1| putative modification methylase HhaI [Lactobacillus iners LactinV
01V1-a]
Length = 198
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 28/121 (23%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF--- 500
G + LF+GIGG +AL G + + + W++ Q+ ++F
Sbjct: 11 GYKFIDLFAGIGGFRLALESFGAKC--------------VYSNEWDKFAQETYHMNFGDT 56
Query: 501 --ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
D+ Q+D RI D++ G PC + S + G E +LF+D RI
Sbjct: 57 PEGDITQVDETRIPDH-------DILCAGFPCQPFSISGKQY--GFEDSRGTLFFDVARI 107
Query: 559 L 559
+
Sbjct: 108 V 108
>gi|406670462|ref|ZP_11077713.1| hypothetical protein HMPREF9707_01616 [Facklamia ignava CCUG 37419]
gi|405579493|gb|EKB53591.1| hypothetical protein HMPREF9707_01616 [Facklamia ignava CCUG 37419]
Length = 478
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + SLF G GG +A +GV+ + SE+ +R T + + D+
Sbjct: 4 LTLGSLFDGSGGFPLAAKFVGVK-----PIWASEIEPFAIRV---TTKRLPEVQHLGDIT 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
QL+ I + D++ GSPC +L+ + R GL+G +S+LFY+ RI+
Sbjct: 56 QLNGASIPAV-------DIISFGSPCQDLSIAG--GRQGLQGSQSNLFYEAVRII 101
>gi|293975|gb|AAB59071.1| cytosine methylase [Neisseria gonorrhoeae]
Length = 341
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ + G + +E ++ I ++ + N T + D++
Sbjct: 12 MKIISLFSGCGGLDLGFEKAGFEIPAA-----NEYDKTIWATF--KANHPKTHLIEGDIR 64
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + I D +IGG PC + AG+ R G++ LF+DY RIL
Sbjct: 65 KIKEEDFPEEI------DGIIGGPPCQSWSEAGALR----GIDDARGQLFFDYIRIL 111
>gi|424741523|ref|ZP_18169870.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis ERV85]
gi|402401323|gb|EJV34101.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis ERV85]
Length = 429
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 31/133 (23%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD-- 502
+NVL LF+G+GG R+G+ N N+ WE + + + D
Sbjct: 9 LNVLELFAGVGG-----FRVGLEHSNADLFKTKWANQ------WEPSRKSQDAFEVYDYR 57
Query: 503 ----------VQQLDANRIEQMINAFGGFDLVIGGSPCNN--LAGSNRHSRDGLEGKESS 550
++++ EQM D+++GG PC + +A S +H G+EGK+
Sbjct: 58 FPNSENINRNIEEISNEEFEQM-----DADIIVGGFPCQDYSVARSKKHEM-GIEGKKGV 111
Query: 551 LFYDYFRILDLVK 563
LF+ R + +K
Sbjct: 112 LFWQIIRATNHIK 124
>gi|365856558|ref|ZP_09396574.1| C-5 cytosine-specific DNA methylase [Acetobacteraceae bacterium
AT-5844]
gi|363717868|gb|EHM01227.1| C-5 cytosine-specific DNA methylase [Acetobacteraceae bacterium
AT-5844]
Length = 320
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 16/117 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
++VL LFSGIGG + L R G K V +I R ++ W + + DV+
Sbjct: 2 LSVLDLFSGIGGFSLGLERTG-GFKTVAFCEIEPFPRAVLAKHWPEVPC------YDDVR 54
Query: 505 QLDANRIEQMINAFGGF--DLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
L A R+ A G D++ GG PC ++ S GL G S L++D R++
Sbjct: 55 TLTAERL-----AADGISVDVICGGFPCQDI--SVAGRGAGLGGARSGLWFDMLRVI 104
>gi|417005625|ref|ZP_11944218.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae FSL
S3-026]
gi|341577438|gb|EGS27846.1| C-5 cytosine-specific DNA methylase [Streptococcus agalactiae FSL
S3-026]
Length = 451
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG R+G+ + + E+++ S+ N +G I++ D++
Sbjct: 1 MKFLDLFAGIGG-----FRIGLESQGHKCLGFCEIDKFARTSYKAMFNTEGE-IEYHDIK 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
++ + Q G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 EVTDHDFRQFR---GQVDIICGGFPCQAFSLAGR--RLGFEDTRGTLFFEIAR 102
>gi|349611852|ref|ZP_08891082.1| modification methylase HhaI [Lactobacillus sp. 7_1_47FAA]
gi|348608317|gb|EGY58302.1| modification methylase HhaI [Lactobacillus sp. 7_1_47FAA]
Length = 336
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
G + LF+GIGG +AL G + + + W++ Q+ ++F D
Sbjct: 11 GYKFIDLFAGIGGFRLALESFGAKC--------------VYSNEWDKFAQETYHMNFGDT 56
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ D +I++ + D++ G PC + S + G E +LF+D RI+
Sbjct: 57 PEGDITQIDE--TSIPDHDILCAGFPCQPFSISGKQY--GFEDSRGTLFFDVARIV 108
>gi|329121769|ref|ZP_08250386.1| DNA (cytosine-5-)-methyltransferase [Dialister micraerophilus DSM
19965]
gi|327468239|gb|EGF13725.1| DNA (cytosine-5-)-methyltransferase [Dialister micraerophilus DSM
19965]
Length = 416
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 61/124 (49%), Gaps = 8/124 (6%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
M I V+ LF+G+GG + L R R + V + +N + N T I
Sbjct: 1 MNKSKIKVVDLFAGVGGFHLGLSRASNRYEVVWANQYEPSRKNQFAYNIYKKNFPKTPIS 60
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+++++ + I +M DL++ G PC + + + ++ G+EG++ +L+++ +L
Sbjct: 61 NEDIRKINKDEIPKM-------DLLVAGFPCQDYSVATSGAK-GIEGEKGALWWEVHEVL 112
Query: 560 DLVK 563
+ K
Sbjct: 113 LIKK 116
>gi|238751088|ref|ZP_04612584.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380]
gi|238710778|gb|EEQ03000.1| Modification methylase FnuDI [Yersinia rohdei ATCC 43380]
Length = 362
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 22/132 (16%)
Query: 434 LSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQ 493
+S + E + I VLSLFSG GG + + G ++ V + DI E + ++ ++
Sbjct: 1 MSNIFEREHENIRVLSLFSGGGGMDFGIESAGGKV--VFANDIVENACKTLDKYFPDSDI 58
Query: 494 KGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSL 551
+ L D +++Q +F D+V+GG PC ++AG+ + D S+L
Sbjct: 59 R--LGDISNIQ------------SFPCVDVVVGGYPCQSFSMAGNRKPDSDA----RSNL 100
Query: 552 FYDYFRILDLVK 563
+ + R+L++V+
Sbjct: 101 YKQFLRVLNIVR 112
>gi|119873163|ref|YP_931170.1| DNA-cytosine methyltransferase [Pyrobaculum islandicum DSM 4184]
gi|119674571|gb|ABL88827.1| DNA-cytosine methyltransferase [Pyrobaculum islandicum DSM 4184]
Length = 319
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
NV +FSG GG + + G ++K V E++R+ R++ N + T++ DV
Sbjct: 3 NVADIFSGAGGFGLGFRKAGFKIKVAV-----EIDRDAARTY--SANHQNTVVLQEDVAN 55
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSN 537
+D + ++ G ++IG PC +N
Sbjct: 56 VD---YKDLVKYGGEIKIIIGSPPCEPFTAAN 84
>gi|425007388|ref|ZP_18418522.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium ERV1]
gi|425015301|ref|ZP_18425933.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium E417]
gi|402995156|gb|EJY09634.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium ERV1]
gi|402996282|gb|EJY10680.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecium E417]
Length = 429
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 58/133 (43%), Gaps = 31/133 (23%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD-- 502
+NVL LF+G+GG R+G+ N N+ WE + + + D
Sbjct: 9 LNVLELFAGVGG-----FRVGLEHSNADLFKTKWANQ------WEPSRKSQDAFEVYDYR 57
Query: 503 ----------VQQLDANRIEQMINAFGGFDLVIGGSPCNN--LAGSNRHSRDGLEGKESS 550
++++ EQM D+++GG PC + +A S +H G+EGK+
Sbjct: 58 FPNSENINRNIEEISNEEFEQM-----DADIIVGGFPCQDYSVARSKKHEM-GIEGKKGV 111
Query: 551 LFYDYFRILDLVK 563
LF+ R + +K
Sbjct: 112 LFWQIIRATNHIK 124
>gi|386754006|ref|YP_006227224.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi112]
gi|384560264|gb|AFI00731.1| type II DNA modification enzyme (methyltransferase) [Helicobacter
pylori Shi112]
Length = 188
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 477 SEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGS 536
++++++ + S+ Q N K T D+ QL+ + + + D+++GG PC + +
Sbjct: 30 NDIDKDAILSY--QANHKETQTILCDIMQLNCHNLPCV-----SIDILLGGPPCQSYSTL 82
Query: 537 NRHSRDGLEGKESSLFYDYFRILDLVKNMM 566
+ D ++++LF +Y R+LDLVK M
Sbjct: 83 GKRKMD----EKANLFKEYLRLLDLVKPKM 108
>gi|257062089|ref|YP_003139977.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
gi|256592255|gb|ACV03142.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8802]
Length = 456
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LFSGIGG + L +LG + +D +E + R++ +N+ T + D+ QL
Sbjct: 31 IDLFSGIGGFRIPLEQLGGKCLGYSEID-TEAIKVYRRNFIRYSNRDETYL--GDITQL- 86
Query: 508 ANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRIL 559
N+I + D+++GG PC ++AG R G E L++D R++
Sbjct: 87 -NQIPFKV------DVIVGGVPCQPWSIAGKLR----GFEDPRGQLWFDVIRLI 129
>gi|255972594|ref|ZP_05423180.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T1]
gi|256762698|ref|ZP_05503278.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T3]
gi|257422413|ref|ZP_05599403.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis X98]
gi|255963612|gb|EET96088.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T1]
gi|256683949|gb|EEU23644.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis T3]
gi|257164237|gb|EEU94197.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis X98]
Length = 351
Score = 42.0 bits (97), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + E+++ R+ ++ + ++ D+
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESAGHECIGFCEIDK-FARTSYKAIHDTTGEVEMHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ ++ I G D++ GG PC + + + R G E +LF++ R +++
Sbjct: 55 TIS----DEFIRGIGSVDVICGGFPCQAFSIAGK--RKGFEDTRGTLFFEIARFASILR 107
>gi|304383358|ref|ZP_07365824.1| site-specific DNA-methyltransferase [Prevotella marshii DSM 16973]
gi|304335526|gb|EFM01790.1| site-specific DNA-methyltransferase [Prevotella marshii DSM 16973]
Length = 478
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 14/91 (15%)
Query: 449 SLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDA 508
SLFSGIG E+A LG +NV +ISE I+ W+ + I + +++Q D
Sbjct: 9 SLFSGIGAPELAAFWLG--WQNVFHCEISEFCNTILNYWYPNS------IGYENIKQADF 60
Query: 509 NRIEQMINAFGGFDLVIGGSPCNNLAGSNRH 539
++ + G D++ GG PC + + +
Sbjct: 61 SKWQ------GKIDVLTGGFPCQPFSSAGQR 85
>gi|218249004|ref|YP_002374375.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
gi|218169482|gb|ACK68219.1| DNA-cytosine methyltransferase [Cyanothece sp. PCC 8801]
Length = 456
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LFSGIGG + L +LG + +D +E + R++ +N+ T + D+ QL
Sbjct: 31 IDLFSGIGGFRIPLEQLGGKCLGYSEID-TEAIKVYRRNFIRYSNRDETYL--GDITQL- 86
Query: 508 ANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRIL 559
N+I + D+++GG PC ++AG R G E L++D R++
Sbjct: 87 -NQIPFKV------DVIVGGVPCQPWSIAGKLR----GFEDPRGQLWFDVIRLI 129
>gi|350272584|ref|YP_004883892.1| putative methyltransferase [Oscillibacter valericigenes Sjm18-20]
gi|348597426|dbj|BAL01387.1| putative methyltransferase [Oscillibacter valericigenes Sjm18-20]
Length = 397
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)
Query: 442 PDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
P + + F+GIGG E H+ G +V + E R +++S + G + D
Sbjct: 2 PSSLTIAGFFAGIGGIEEGFHKEGA--SSVFFCEKDERARTVLQSHFPGVPIAGDIQDVI 59
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
+ ++ D++ G PC +L S + G+ G +S L FRI+D
Sbjct: 60 SIPKV---------------DIITAGFPCQDL--SQAGLKKGIGGTQSGLVQHLFRIIDS 102
Query: 562 VKN 564
++
Sbjct: 103 IEK 105
>gi|417915588|ref|ZP_12559197.1| modification methylase HpaII [Streptococcus mitis bv. 2 str. SK95]
gi|342833427|gb|EGU67708.1| modification methylase HpaII [Streptococcus mitis bv. 2 str. SK95]
Length = 452
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LFSGIGG + + +G +D R ++ Q I+F D++
Sbjct: 1 MKFIDLFSGIGGFRLGMESVGHECIGFCEID------KFARESYKSIFQTEGEIEFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
+ + +++ G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 NVSDDEFKKLR---GKVDIICGGFPCQAFSIAGR--RLGFEDTRGTLFFEIAR 102
>gi|253827874|ref|ZP_04870759.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT
98-5491]
gi|313142438|ref|ZP_07804631.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT
98-5491]
gi|253511280|gb|EES89939.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT
98-5491]
gi|313131469|gb|EFR49086.1| DNA (cytosine-5-)-methyltransferase [Helicobacter canadensis MIT
98-5491]
Length = 328
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 18/118 (15%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
+ LF+GIGG R G ++ V SE+++ +++ +K + D+ +
Sbjct: 24 TFIDLFAGIGGI-----RRGFEIEGGTCVFSSEIDKFACQTYEANWGEKPS----GDITK 74
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++A I + FD+++GG PC + + + R G + ++F++ RILD K
Sbjct: 75 IEACDIPK-------FDILLGGFPCQAFSIAGK--RKGFKDTRGTMFFEIARILDYHK 123
>gi|59802113|ref|YP_208825.1| DcmB [Neisseria gonorrhoeae FA 1090]
gi|268593822|ref|ZP_06127989.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria
gonorrhoeae 35/02]
gi|268597735|ref|ZP_06131902.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria
gonorrhoeae FA19]
gi|291042825|ref|ZP_06568566.1| site-specific DNA-methyltransferase M.NgoPII [Neisseria gonorrhoeae
DGI2]
gi|293398154|ref|ZP_06642359.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|44873|emb|CAA30038.1| unnamed protein product [Neisseria gonorrhoeae]
gi|44888|emb|CAA36888.1| NgoPII restriction and modification [Neisseria gonorrhoeae]
gi|293960|gb|AAA17019.1| cytosine methylase [Neisseria gonorrhoeae]
gi|59719008|gb|AAW90413.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria
gonorrhoeae FA 1090]
gi|268547211|gb|EEZ42629.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria
gonorrhoeae 35/02]
gi|268551523|gb|EEZ46542.1| site-specific DNA-methyltransferase M. NgoPII [Neisseria
gonorrhoeae FA19]
gi|291013259|gb|EFE05225.1| site-specific DNA-methyltransferase M.NgoPII [Neisseria gonorrhoeae
DGI2]
gi|291611417|gb|EFF40487.1| DNA (cytosine-5-)-methyltransferase [Neisseria gonorrhoeae F62]
gi|227054|prf||1613419B NgoPII methylase
Length = 341
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ + G + +E ++ I ++ + N T + D++
Sbjct: 12 MKIISLFSGCGGLDLGFEKAGFEIPAA-----NEYDKTIWATF--KANHPKTHLIEGDIR 64
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + I D +IGG PC + AG+ R G++ LF+DY RIL
Sbjct: 65 KIKEEDFPEEI------DGIIGGPPCQSWSEAGALR----GIDDARGQLFFDYIRIL 111
>gi|399115406|emb|CCG18207.1| DNA-cytosine methyltransferase [Taylorella equigenitalis 14/56]
Length = 338
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ + G ++ + +E +++I +++ + N A +
Sbjct: 1 MKLISLFSGAGGLDLGFEQAGYQI-----IAANEFDKSIWKTYEDNHN--------APLL 47
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ D ++I + + F D +IGG PC + S S G++ LFY+Y RIL
Sbjct: 48 KGDISKI--LSSEFPDCDGIIGGPPCQSW--SEAGSLKGIDDPRGMLFYEYIRIL 98
>gi|384244928|gb|EIE18425.1| S-adenosyl-L-methionine-dependent methyltransferase, partial
[Coccomyxa subellipsoidea C-169]
Length = 468
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 64/156 (41%), Gaps = 32/156 (20%)
Query: 445 INVLSLFSGIGGAEVALHRLGV-RMKNVV-----SVDISEVNRNIVRSWWEQTN------ 492
+ + +F+G GG LHR G R K + + + +VN +W N
Sbjct: 1 LATMDIFAGCGGLSEGLHRAGAARTKWAIEYEQPAAEAFKVNNPDAVTWCCNCNVLLTAA 60
Query: 493 -QKGTLIDFADVQQ--------LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDG 543
K DF D + LDA + + A G D + GG PC +G NR ++
Sbjct: 61 MTKAGAADFCDASEEAKEQAAKLDAETVATL-PAPGEVDFLCGGPPCQGYSGMNRFNKGT 119
Query: 544 LEGKESSL------FYDYFR----ILDLVKNMMQRN 569
++S+ + D++R +L+ V+N + N
Sbjct: 120 WSLVQNSMVMAYLSYADFYRPRYFLLENVRNFVSHN 155
>gi|420483743|ref|ZP_14982373.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3]
gi|420514098|ref|ZP_15012571.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3b]
gi|393102968|gb|EJC03532.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3]
gi|393158561|gb|EJC58821.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-3b]
Length = 203
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 477 SEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGS 536
++++++ + S+ Q N K T D+ QL + + + D+++GG PC + +
Sbjct: 30 NDIDKDAILSY--QANHKETQTILCDIAQLHCHNLPCV-----PIDILLGGPPCQSYSTL 82
Query: 537 NRHSRDGLEGKESSLFYDYFRILDLVK 563
+ D ++++LF +Y RILDLVK
Sbjct: 83 GKRKMD----EKANLFKEYLRILDLVK 105
>gi|357632439|ref|ZP_09130317.1| C-5 cytosine-specific DNA methylase [Desulfovibrio sp. FW1012B]
gi|357580993|gb|EHJ46326.1| C-5 cytosine-specific DNA methylase [Desulfovibrio sp. FW1012B]
Length = 250
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 17/113 (15%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V SLFSG G ++A +G+ D R+I+ W D D+
Sbjct: 3 VGSLFSGAGLGDIAAEAIGLSHAWFCECD--PFARSIMERRWPGVP---VFQDVRDIHAK 57
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+A R+ D+V+GG PC +++ + + G+ GK S L+ +Y RIL
Sbjct: 58 NAKRV----------DIVVGGFPCQDISCAGAGA--GITGKRSGLWSEYARIL 98
>gi|323451335|gb|EGB07212.1| hypothetical protein AURANDRAFT_71808 [Aureococcus anophagefferens]
Length = 4718
Score = 42.0 bits (97), Expect = 0.93, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 11/112 (9%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
G V+S GIG L+ L +R+K V+V+IS+V + + + +G ++ DV
Sbjct: 4435 GAVVVSDCDGIGVLRFVLNLLKIRVKKYVAVEISDVAFEAMLA--NNGDFEGEIVRVKDV 4492
Query: 504 QQLDANRIEQMINAFG--GFDLVIGGSPCNNLAGSN--RHSRDGLEGKESSL 551
+ ++ A G D+ + G PCN+LAGSN R D + K S L
Sbjct: 4493 CDY-----KSLLEALGDDAIDIYVAGPPCNDLAGSNPRREVNDVRKTKTSKL 4539
>gi|307290179|ref|ZP_07570098.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0411]
gi|306498807|gb|EFM68305.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0411]
Length = 416
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + E+++ R+ ++ + ++ D+
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESAGHECIGFCEIDK-FARTSYKAIHDTTGEVEMHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ ++ I G D++ GG PC + + + R G E +LF++ R +++
Sbjct: 55 TIS----DEFIRGIGSVDVICGGFPCQAFSIAGK--RKGFEDTRGTLFFEIARFASILR 107
>gi|283834911|ref|ZP_06354652.1| C-5 cytosine-specific DNA methylase family protein [Citrobacter
youngae ATCC 29220]
gi|291069174|gb|EFE07283.1| C-5 cytosine-specific DNA methylase family protein [Citrobacter
youngae ATCC 29220]
Length = 400
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 8/122 (6%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNR---NIVRSWWEQTNQKGTLIDFA 501
I + LFSG GG +A LG+ + + + +D + N++R + N K D
Sbjct: 14 IKAIDLFSGAGGFSLAALELGIDVLSAIELDKDACDTYRDNLIRK--RENNIKLLNQDIM 71
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
+ + +E + G D++IGG PC + S+R G++ ++L YF + +
Sbjct: 72 SISPMSM--MEDLFLLEGELDIIIGGPPCQGFS-SHRIKNSGVDDPRNNLLIRYFDFVKV 128
Query: 562 VK 563
K
Sbjct: 129 FK 130
>gi|268604583|ref|ZP_06138750.1| cytosine methylase [Neisseria gonorrhoeae PID1]
gi|268588714|gb|EEZ53390.1| cytosine methylase [Neisseria gonorrhoeae PID1]
Length = 341
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ + G + +E ++ I ++ + N T + D++
Sbjct: 12 MKIISLFSGCGGLDLGFEKAGFEIPAA-----NEYDKTIWATF--KANHPKTHLIEGDIR 64
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + I D +IGG PC + AG+ R G++ LF+DY RIL
Sbjct: 65 KIKEEDFPEEI------DGIIGGPPCQSWSEAGALR----GIDDARGQLFFDYIRIL 111
>gi|420497419|ref|ZP_14995979.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25]
gi|420527743|ref|ZP_15026137.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25c]
gi|420530274|ref|ZP_15028658.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25d]
gi|393113698|gb|EJC14216.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25]
gi|393134869|gb|EJC35278.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25c]
gi|393135477|gb|EJC35873.1| DNA (cytosine-5-)-methyltransferase family protein [Helicobacter
pylori Hp P-25d]
Length = 160
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 477 SEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGS 536
++++++ + S+ Q N K T D+ QL + + ++ D+++GG PC + +
Sbjct: 30 NDIDKDAILSY--QANHKETQTILCDIAQLHCHNLPRV-----PIDILLGGPPCQSYSTL 82
Query: 537 NRHSRDGLEGKESSLFYDYFRILDLVK 563
+ D ++++LF +Y RILDLVK
Sbjct: 83 GKRKMD----EKANLFKEYLRILDLVK 105
>gi|365878799|ref|ZP_09418255.1| Cytosine-specific methyltransferase [Bradyrhizobium sp. ORS 375]
gi|365293314|emb|CCD90786.1| Cytosine-specific methyltransferase [Bradyrhizobium sp. ORS 375]
Length = 380
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ SLFSGIGG EV L GV V+ + ++ ++I++ + T +D++
Sbjct: 6 MEACSLFSGIGGFEVGLAAAGV--HTVLMCENDDLAQSILKLRFPTTRLT------SDIR 57
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
L A D+V G PC +L+ + R + G+ G S L + FR+L+
Sbjct: 58 HL---------KALPSCDIVTAGWPCQDLSQAGRTA--GIAGSRSGLVTEVFRLLE 102
>gi|334126762|ref|ZP_08500708.1| C-5 cytosine-specific family DNA methylase [Centipeda periodontii
DSM 2778]
gi|333390922|gb|EGK62046.1| C-5 cytosine-specific family DNA methylase [Centipeda periodontii
DSM 2778]
Length = 537
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVS-VDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
N++ LF+G GG LG R + ++ V +E+N + +++ + N K T + + DV
Sbjct: 8 NIIDLFAGAGGLS-----LGFRQTDRINIVAAAELNPHARKTY--KRNFKSTCL-YEDVC 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDY 555
++D ++ + G D+VIGG PC + +NR R L + L +Y
Sbjct: 60 KID---YAELKDELGPIDIVIGGPPCQGFSNANRQ-RTSLINMNNRLVKEY 106
>gi|397698567|ref|YP_006539321.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis D32]
gi|397338174|gb|AFO45844.1| C-5 cytosine-specific DNA methylase [Enterococcus faecalis D32]
Length = 423
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 51/124 (41%), Gaps = 12/124 (9%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
M + L LFSG+GG + L + G R +D R ++ + ++
Sbjct: 1 MTKQQLTFLDLFSGVGGFRLGLEKAGHRCIGFCEIDAK------ARESYKAIHNTENEVE 54
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ + ++ + G D++ GG PC + + + R G +LF++ R
Sbjct: 55 MHDITTIS----DEFVRGIGRVDIIAGGFPCQAFSVAGK--RKGFRDTRGTLFFEIARFA 108
Query: 560 DLVK 563
+++
Sbjct: 109 HILQ 112
>gi|322376648|ref|ZP_08051141.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
sp. M334]
gi|321282455|gb|EFX59462.1| type II DNA modification methyltransferase Spn5252IP [Streptococcus
sp. M334]
Length = 452
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LFSGIGG + + +G +D R ++ Q I+F D++
Sbjct: 1 MRFIDLFSGIGGFRLGMESVGHECIGFCEID------KFARKSYKSIFQTEGEIEFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
+ + +++ G D+V GG PC + + R R G E +LF++ R
Sbjct: 55 DVSDDEFKKLR---GKVDVVCGGFPCQAFSIAGR--RLGFEDTRGTLFFEIAR 102
>gi|147668731|ref|YP_001213549.1| DNA-cytosine methyltransferase [Dehalococcoides sp. BAV1]
gi|146269679|gb|ABQ16671.1| DNA-cytosine methyltransferase [Dehalococcoides sp. BAV1]
Length = 335
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 20/117 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ + G NVV + E ++ I ++ Q N T +D +
Sbjct: 1 MQIISLFSGAGGLDLGFEKAGF---NVVWAN--EYDKTIWDTY--QHNFPNTNLDTRSIT 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + I D +IGG PC + AG+ R G+ LF++Y RIL
Sbjct: 54 EIPSTEIPTS-------DGIIGGPPCQSWSEAGALR----GINDHRGQLFFEYIRIL 99
>gi|405979077|ref|ZP_11037422.1| hypothetical protein HMPREF9241_00145 [Actinomyces turicensis
ACS-279-V-Col4]
gi|404393228|gb|EJZ88284.1| hypothetical protein HMPREF9241_00145 [Actinomyces turicensis
ACS-279-V-Col4]
Length = 468
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + SLF G GG +A +G+R V SEV + T + + DV
Sbjct: 4 LTLGSLFDGSGGFPLAALNVGIR-----PVWASEVEPFPILV---TTTRLPAVTHLGDVN 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+D IE + D++ GSPC +L+ + R + GL G S LF+ RI+
Sbjct: 56 TIDGTVIEPV-------DIISFGSPCQDLSVAGRQT--GLAGSRSGLFFQAVRII 101
>gi|239624264|ref|ZP_04667295.1| DNA-cytosine methyltransferase [Clostridiales bacterium 1_7_47_FAA]
gi|239520650|gb|EEQ60516.1| DNA-cytosine methyltransferase [Clostridiales bacterium 1_7_47FAA]
Length = 470
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 52/118 (44%), Gaps = 23/118 (19%)
Query: 445 INVLSLFSGIGGAEVALHRLGVR---MKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFA 501
I + +LF GIGG A G+R V+ IS R+I ++
Sbjct: 40 ITLGTLFDGIGGFPYAALFYGIRPVWASEVLPTAISVTKRHIPE-----------MVHVG 88
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ +LD ++ + D++ GSPC L+ S R R GL + S LF + RI+
Sbjct: 89 DITKLDGRKLPPV-------DIITFGSPCQGLSISGR--RLGLADERSGLFSEAIRII 137
>gi|39933426|ref|NP_945702.1| site-specific DNA-methyltransferase [Rhodopseudomonas palustris
CGA009]
gi|192288783|ref|YP_001989388.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1]
gi|39647272|emb|CAE25793.1| possible site-specific DNA-methyltransferase [Rhodopseudomonas
palustris CGA009]
gi|192282532|gb|ACE98912.1| DNA-cytosine methyltransferase [Rhodopseudomonas palustris TIE-1]
Length = 390
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 18/116 (15%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V LF+G+GG E+ LHR G +V +I + ++ + G D A ++
Sbjct: 1 MKVAGLFAGVGGLELGLHRAG--HDTLVFSEIWDPAGAVLERRFGGVPNVG---DVASLK 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
L A+ DL+ G PC +L+ + + + G+ G++S L FR++D
Sbjct: 56 SLPAD-----------VDLMTAGFPCQDLSQAGKTA--GIRGRKSGLVSHVFRLID 98
>gi|402774832|ref|YP_006628776.1| DNA-methyltransferase [Bacillus subtilis QB928]
gi|418034312|ref|ZP_12672787.1| hypothetical protein BSSC8_37310 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|351468957|gb|EHA29158.1| hypothetical protein BSSC8_37310 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402480017|gb|AFQ56526.1| DNA-methyltransferase (cytosine-specific) [Bacillus subtilis QB928]
Length = 394
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIGG E+ LH+ G + VD + + ++ N G I
Sbjct: 6 LKVVSLFSGIGGIELGLHQSGHTTEIFCEVD--PLAKAVL-----SKNFPGVKI------ 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+ D N I ++ + DLV G PC +L S ++G++G S L F +++
Sbjct: 53 EDDINEIRELPSC----DLVAAGFPCQDL--SQAGGKEGIDGSRSGLVKKLFELIE 102
>gi|168185144|ref|ZP_02619808.1| modification methylase SinI [Clostridium botulinum Bf]
gi|182671812|gb|EDT83773.1| modification methylase SinI [Clostridium botulinum Bf]
Length = 363
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
N +S F+G GG ++ +H G ++ + V+I + ++ + N K D+ +
Sbjct: 3 NAISFFTGAGGLDIGVHDAGFNVR--LCVEIEKRYCETIKLNYPDWNIKN-----GDIME 55
Query: 506 LDANRI--EQMINAFGGFDLVIGGSPCNNLA-GSNRHSRDGLEGKESSLFYDYFR 557
D RI E ++N+ L+ GGSPC + + R + + GK F D R
Sbjct: 56 YDKERIYKEGLLNSNEEISLIFGGSPCQSFSTAGRRRAFEDPRGKAMLKFADIIR 110
>gi|428213690|ref|YP_007086834.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
gi|428002071|gb|AFY82914.1| DNA-methyltransferase Dcm [Oscillatoria acuminata PCC 6304]
Length = 328
Score = 41.6 bits (96), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 18/121 (14%)
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD 502
D I + LF+GIGG +A + G V S +I+E QK +F D
Sbjct: 3 DSIKFIDLFAGIGGFRLAFEKAGYHC--VYSCEINE------------ACQKVYYQNFGD 48
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLV 562
+ + D ++ I D++ G PC + S + R+G + +LF+ +I+++
Sbjct: 49 LPEKDITNLD--IENIPNHDVLTAGFPCQPFSISGK--RNGFKDTRGTLFFHLCKIIEVK 104
Query: 563 K 563
K
Sbjct: 105 K 105
>gi|421491166|ref|ZP_15938533.1| putative modification methylase HpaII [Streptococcus anginosus
SK1138]
gi|400372163|gb|EJP25112.1| putative modification methylase HpaII [Streptococcus anginosus
SK1138]
Length = 452
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LFSGIGG + + +G +D R ++ Q I+F D++
Sbjct: 1 MKFIDLFSGIGGFRLGMESVGHECIGFCEID------KFARESYKSIFQTEGEIEFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
+ + +++ G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 NVSDDEFKKLR---GKVDIICGGFPCQAFSIAGR--RLGFEDTRGTLFFEIAR 102
>gi|403278153|ref|XP_003930688.1| PREDICTED: tRNA (cytosine(38)-C(5))-methyltransferase [Saimiri
boliviensis boliviensis]
Length = 391
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 15/121 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VL L+SG+GG AL V + V +VD++ V + R + T I+ +Q
Sbjct: 4 LRVLELYSGVGGMHHALRESCVPAQVVAAVDVNTVANEVYRYNFPHTQLLAKTIEGITLQ 63
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
+ D R+ FD+++ PC R D + + +S Y ILD++
Sbjct: 64 EFD--RL--------SFDMILMSPPCQPFTRIGRQG-DMTDSRTNSFLY----ILDILPR 108
Query: 565 M 565
+
Sbjct: 109 L 109
>gi|336065192|ref|YP_004560051.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pasteurianus
ATCC 43144]
gi|334283392|dbj|BAK30965.1| DNA (cytosine-5-)-methyltransferase [Streptococcus pasteurianus
ATCC 43144]
Length = 420
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 19/127 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VL LF+G+GG + L KNV S + WE + + + D
Sbjct: 1 MKVLELFAGVGGFRIGLENAD---KNVFKTKWS--------NQWEPSRKSQDAFEVYDYH 49
Query: 505 QLDANRIEQMIN-----AFGGFD--LVIGGSPCNNLA-GSNRHSRDGLEGKESSLFYDYF 556
D+ I + F D +++GG PC + + ++ + G+EGK+ LF++
Sbjct: 50 FPDSENINISVTDIPDEKFASMDADMIVGGFPCQDYSVARSKKNEQGIEGKKGVLFWEII 109
Query: 557 RILDLVK 563
R ++K
Sbjct: 110 RATRIIK 116
>gi|256958119|ref|ZP_05562290.1| C5 methyltransferase alpha subunit [Enterococcus faecalis DS5]
gi|256948615|gb|EEU65247.1| C5 methyltransferase alpha subunit [Enterococcus faecalis DS5]
Length = 298
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + E+++ R+ ++ + ++ D+
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESAGHECIGFCEIDK-FARTSYKAIHDTTGEVEMHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ ++ I G D++ GG PC + + + R G E +LF++ R +++
Sbjct: 55 TIS----DEFIRGIGSVDVICGGFPCQAFSIAGK--RKGFEDTRGTLFFEIARFASILR 107
>gi|392397895|ref|YP_006434496.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
gi|390528973|gb|AFM04703.1| DNA-methyltransferase Dcm [Flexibacter litoralis DSM 6794]
Length = 332
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 20/125 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LFSG GG + G +NV S+DI S+ E +FA+ Q
Sbjct: 5 LKYIDLFSGAGGFSLGFDNKG--FQNVFSIDIEP-------SFCETYKH-----NFANHQ 50
Query: 505 QLDANRIE------QMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
++ + + + + F D+VIGG PC + + R ++ + LF ++ RI
Sbjct: 51 LVEKDICDLSDSEIKYLKEFDEIDVVIGGPPCQGFSIAGNIGRKFVDDPRNRLFKEFVRI 110
Query: 559 LDLVK 563
+ +VK
Sbjct: 111 VKVVK 115
>gi|390953503|ref|YP_006417261.1| DNA-methyltransferase Dcm [Aequorivita sublithincola DSM 14238]
gi|390419489|gb|AFL80246.1| DNA-methyltransferase Dcm [Aequorivita sublithincola DSM 14238]
Length = 436
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/147 (21%), Positives = 59/147 (40%), Gaps = 22/147 (14%)
Query: 419 KSLGNSFQVDTVAYHLSVLKEMYP------DGINVLSLFSGIGGAEVALHRLGVRMKNVV 472
+ + N F + + Y + K+ P + LF+GIGG +A LG
Sbjct: 72 EKITNKFAEEALQYLIFDFKKTVPFPATENPSFKFIDLFAGIGGFRLAFQNLG------- 124
Query: 473 SVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNN 532
+ + S W++ +++ +F ++ D + + FD++ G PC
Sbjct: 125 -------GKCVFTSEWDKYSKQTYKANFGEIPFGDITKDKTKSYIPDDFDVLCAGFPCQA 177
Query: 533 LAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ + R R G E +LF+D I+
Sbjct: 178 FSIAGR--RGGFEDTRGTLFFDVAEII 202
>gi|194099965|ref|YP_002003104.1| Modification methylase NgoPII [Neisseria gonorrhoeae NCCP11945]
gi|240015049|ref|ZP_04721962.1| Modification methylase NgoPII [Neisseria gonorrhoeae DGI18]
gi|240017498|ref|ZP_04724038.1| Modification methylase NgoPII [Neisseria gonorrhoeae FA6140]
gi|240122118|ref|ZP_04735080.1| Modification methylase NgoPII [Neisseria gonorrhoeae PID24-1]
gi|254494673|ref|ZP_05107844.1| modification methylase HaeIII [Neisseria gonorrhoeae 1291]
gi|268599983|ref|ZP_06134150.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
MS11]
gi|268602320|ref|ZP_06136487.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
PID18]
gi|268683040|ref|ZP_06149902.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
PID332]
gi|268683292|ref|ZP_06150154.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
SK-92-679]
gi|268687469|ref|ZP_06154331.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
SK-93-1035]
gi|385336874|ref|YP_005890821.1| DcmB [Neisseria gonorrhoeae TCDC-NG08107]
gi|462655|sp|P08455.2|MTP2_NEIGO RecName: Full=Modification methylase NgoPII; Short=M.NgoPII;
AltName: Full=Cytosine-specific methyltransferase NgoPII
gi|193935255|gb|ACF31079.1| Modification methylase NgoPII [Neisseria gonorrhoeae NCCP11945]
gi|226513713|gb|EEH63058.1| modification methylase HaeIII [Neisseria gonorrhoeae 1291]
gi|268584114|gb|EEZ48790.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
MS11]
gi|268586451|gb|EEZ51127.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
PID18]
gi|268623324|gb|EEZ55724.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
PID332]
gi|268623576|gb|EEZ55976.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
SK-92-679]
gi|268627753|gb|EEZ60153.1| HaeIII DNA modification methyltransferase [Neisseria gonorrhoeae
SK-93-1035]
gi|317165417|gb|ADV08958.1| DcmB [Neisseria gonorrhoeae TCDC-NG08107]
Length = 330
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ + G + +E ++ I ++ + N T + D++
Sbjct: 1 MKIISLFSGCGGLDLGFEKAGFEIPAA-----NEYDKTIWATF--KANHPKTHLIEGDIR 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + I D +IGG PC + AG+ R G++ LF+DY RIL
Sbjct: 54 KIKEEDFPEEI------DGIIGGPPCQSWSEAGALR----GIDDARGQLFFDYIRIL 100
>gi|313143285|ref|ZP_07805478.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG
18818]
gi|386762436|ref|YP_006236072.1| type II 5-cytosoine methyltransferase [Helicobacter cinaedi
PAGU611]
gi|313128316|gb|EFR45933.1| cytosine specific DNA methyltransferase [Helicobacter cinaedi CCUG
18818]
gi|385147453|dbj|BAM12961.1| type II 5-cytosoine methyltransferase [Helicobacter cinaedi
PAGU611]
gi|396079917|dbj|BAM33293.1| type II 5-cytosoine methyltransferase [Helicobacter cinaedi ATCC
BAA-847]
Length = 305
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I V+SLFSG GG ++ + G + V +++++ S+ + G I D+
Sbjct: 4 IKVISLFSGCGGLDLGFIKAGFEI-----VFANDIDKEACESYQKNI---GNHIVCKDIY 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
L+ +E++ NA D++IGG PC +N +R+ L + L+ +Y R+L
Sbjct: 56 TLE---VEEIPNA----DILIGGFPCLGFTIANGKNRN-LNSHYNKLYLEYARVL 102
>gi|291335050|gb|ADD94680.1| cytosine specific DNA methyltransferase DDEM [uncultured phage
MedDCM-OCT-S08-C620]
Length = 129
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD 502
+G NV+S FSG GG+ LG RM + +E + ++ + N +++D D
Sbjct: 27 NGFNVVSTFSGCGGS-----CLGYRMAGYRVLYANEFIKAAQETY--KANHPNSILDSND 79
Query: 503 VQQLDANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDG 543
V+Q+ I + IN G DL G PC + + S + R G
Sbjct: 80 VRQIRPEEILERINLKKGELDLFDGSPPCASFSISGKEKRLG 121
>gi|429759797|ref|ZP_19292292.1| DNA (cytosine-5-)-methyltransferase [Veillonella atypica KON]
gi|429179017|gb|EKY20279.1| DNA (cytosine-5-)-methyltransferase [Veillonella atypica KON]
Length = 430
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSW------WEQTNQKGTLI 498
+ + S+F G+GG V L + + + E +R I ++ + GT
Sbjct: 1 MKIFSMFDGVGGFIVGLENSSKEVFQTLYSNQYEPSRKIQDAYEVGLYRFPNMEHIGT-- 58
Query: 499 DFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLA-GSNRHSRDGLEGKESSLFYDYFR 557
DV + + E+M G D+++GG PC + + ++ + G+EGK+ LF++ R
Sbjct: 59 ---DVALIPNEKFEEMKQ--NGVDMIVGGFPCQDYSVARSKKNELGIEGKKGVLFWEIIR 113
Query: 558 ILDLVK 563
+++K
Sbjct: 114 ATEVIK 119
>gi|312281368|ref|YP_004022731.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181897|gb|ADQ42066.1| DNA-cytosine methyltransferase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 319
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 30/137 (21%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I V+SLFSG+GG +A + G + + + DI + RS + L++ D+Q
Sbjct: 4 IRVVSLFSGVGGICLAFKQAGFDV--IWANDIDKYACITYRSNFPTVE----LVE-GDIQ 56
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRI---- 558
+D+N I + D++ G PC ++AG R GL LFY+ RI
Sbjct: 57 SIDSNNIPEC-------DIITAGFPCQPFSIAGYQR----GLNDPRGRLFYEIVRIVHDK 105
Query: 559 ------LDLVKNMMQRN 569
L+ VKN++ N
Sbjct: 106 KPKIIFLENVKNLVSHN 122
>gi|86142380|ref|ZP_01060890.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella
blandensis MED217]
gi|85831132|gb|EAQ49589.1| putative 5-methylcytosine methyltransferase [Leeuwenhoekiella
blandensis MED217]
Length = 332
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 18/124 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQK---GTLI--D 499
+ + LFSG GG + G +NV SVDI S+ E N LI D
Sbjct: 5 LKYIDLFSGAGGFSLGFDNKG--FQNVFSVDIEP-------SFCETYNHNFPSHNLIHKD 55
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
DV+ + +++ + D+VIGG PC + + R ++ + LF ++ R++
Sbjct: 56 ICDVKDAELKYLKE----YDEIDVVIGGPPCQGFSIAGNIGRKFIDDPRNKLFKEFVRVV 111
Query: 560 DLVK 563
+V+
Sbjct: 112 KVVE 115
>gi|448497515|ref|ZP_21610468.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
gi|445699746|gb|ELZ51766.1| DNA-cytosine methyltransferase [Halorubrum coriense DSM 10284]
Length = 399
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 56/128 (43%), Gaps = 14/128 (10%)
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD 502
D V FSG GG ++ R G + + D E R N T + D
Sbjct: 27 DAPVVAGFFSGCGGLDLGFERAGFDV--ALGSDQWEPAAETYRR-----NFADTEVLEGD 79
Query: 503 VQQLDANRIEQMINAFG----GFDLVIGGSPCNNLAGSNRHS--RDGLE-GKESSLFYDY 555
V++LDA I + G G D+VIGG PC + N D +E + ++LF ++
Sbjct: 80 VRELDAPAIRDAVAGAGYDPDGVDVVIGGPPCQGFSRLNNEQIELDEMEKDRRNTLFEEF 139
Query: 556 FRILDLVK 563
R++ +++
Sbjct: 140 LRVVSVLE 147
>gi|402830195|ref|ZP_10878900.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. CM59]
gi|402286252|gb|EJU34728.1| DNA (cytosine-5-)-methyltransferase [Capnocytophaga sp. CM59]
Length = 337
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++ LFSGIGG + R G + SE++++ + ++ L D ++
Sbjct: 1 MKIIDLFSGIGGFSLGFQRAGYQFTEHY---FSEIDKHAIANYKYNFPHAINLGDITTIR 57
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSL 551
D G D++ GSPC + + + R R GL G +SSL
Sbjct: 58 STD----------LTGIDIITFGSPCQDFSLAGR--RKGLAGSKSSL 92
>gi|417795101|ref|ZP_12442330.1| modification methylase HpaII [Streptococcus oralis SK255]
gi|334265943|gb|EGL84433.1| modification methylase HpaII [Streptococcus oralis SK255]
Length = 452
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LFSGIGG + + +G +D R ++ Q I+F D++
Sbjct: 1 MRFIDLFSGIGGFRLGMESVGHECIGFCEID------KFARESYKSIFQTEGEIEFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
+ + +++ G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 DVSDDEFKKLR---GKVDIICGGFPCQAFSIAGR--RLGFEDTRGTLFFEIAR 102
>gi|422731805|ref|ZP_16788156.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0645]
gi|315162212|gb|EFU06229.1| DNA (cytosine-5-)-methyltransferase [Enterococcus faecalis TX0645]
Length = 398
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/119 (21%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L LF+GIGG RLG+ + E+++ R+ ++ + ++ D+
Sbjct: 1 MKFLDLFAGIGG-----FRLGMESAGHECIGFCEIDK-FARTSYKAIHDTTGEVEMHDIT 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ ++ I G D++ GG PC + + + R G E +LF++ R +++
Sbjct: 55 TIS----DEFIRGIGSVDVICGGFPCQAFSIAGK--RKGFEDTRGTLFFEIARFASILR 107
>gi|295105242|emb|CBL02786.1| C-5 cytosine-specific DNA methylase. [Faecalibacterium prausnitzii
SL3/3]
Length = 306
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 10/76 (13%)
Query: 391 LEPDEVEMLLGFPKNHTRGGGISRTD----------RYKSLGNSFQVDTVAYHLSVLKEM 440
L P E E L G+P T G + T RYK+LGNS + + +K+
Sbjct: 168 LTPTECERLQGYPDGWTDIGEWTDTKGKKHKAADSPRYKALGNSIALPQWFWITQKMKQY 227
Query: 441 YPDGINVLSLFSGIGG 456
P G + SLF GIGG
Sbjct: 228 LPAGATLGSLFDGIGG 243
>gi|150400370|ref|YP_001324137.1| DNA-cytosine methyltransferase [Methanococcus vannielii SB]
gi|150013073|gb|ABR55525.1| DNA-cytosine methyltransferase [Methanococcus vannielii SB]
Length = 368
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 24/132 (18%)
Query: 441 YPDGINVLSLFSGIGGAEVAL---------HRLGVRMKNVVSVDISEVNRNIVRSWWEQT 491
Y V+SLFSG GG ++ H + + S DIS+ R++
Sbjct: 31 YAKKFKVISLFSGCGGMDLGFKGGFEIFKQHYEHNPYEIIFSNDISD---KACRTYESNF 87
Query: 492 NQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSL 551
D D++ E + NA D+VIGG PC + + + + R GL + L
Sbjct: 88 CHSSVCADIKDIKN------EDIPNA----DIVIGGFPCQDFSHAGK--RKGLSAERGRL 135
Query: 552 FYDYFRILDLVK 563
+ + R++D +K
Sbjct: 136 YLEMKRVIDYIK 147
>gi|340710222|ref|XP_003393693.1| PREDICTED: DNA (cytosine-5)-methyltransferase 3B-like [Bombus
terrestris]
Length = 753
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS--LFYD 554
++ +V+ + +I+++ DL+IGGSPCN+L+ +N R GL + + LF++
Sbjct: 516 IVHLGNVKDITKEKIQEI----APIDLLIGGSPCNDLSLAN-PMRLGLYDPKGTGILFFE 570
Query: 555 YFRILDLVKNM 565
Y RI DL+K +
Sbjct: 571 YCRIKDLLKKV 581
>gi|308172812|ref|YP_003919517.1| DNA (cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens DSM
7]
gi|307605676|emb|CBI42047.1| DNA (cytosine-5-)-methyltransferase [Bacillus amyloliquefaciens DSM
7]
Length = 406
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 443 DGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFAD 502
+G+NVL LF G G + G + + D +N V+++ + G ++ AD
Sbjct: 103 NGMNVLELFCGGGLGAIGFKAAGYNIVKALDFD-----KNAVKAY---RHNFGDYVEQAD 154
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+ +D I++ D++ GG PC + + + + + G +G+ L + Y I++
Sbjct: 155 ISAVD-------IDSLPDTDVIFGGPPCQDFSVAGKGA--GADGERGKLVWRYLEIIE 203
>gi|448427452|ref|ZP_21583767.1| DNA-cytosine methyltransferase [Halorubrum terrestre JCM 10247]
gi|445678139|gb|ELZ30633.1| DNA-cytosine methyltransferase [Halorubrum terrestre JCM 10247]
Length = 426
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 56/127 (44%), Gaps = 14/127 (11%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
V FSG GG ++ R G + + D E R N T DV++L
Sbjct: 58 VAGFFSGCGGLDLGFERAGFDV--ALGSDQWEPAAETYRR-----NFPDTEFVEEDVREL 110
Query: 507 DANRIEQMINAFG----GFDLVIGGSPCNNLAGSNRHS--RDGLE-GKESSLFYDYFRIL 559
DA I + + G G D+VIGG PC + N D +E + ++LF ++ R++
Sbjct: 111 DAPAIREAVAGAGYDPDGVDVVIGGPPCQGFSRLNNEQIELDEMEKDRRNTLFEEFLRVV 170
Query: 560 DLVKNMM 566
+++ +
Sbjct: 171 SVLEPQL 177
>gi|385225390|ref|YP_005785315.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 83]
gi|332673536|gb|AEE70353.1| DNA (cytosine-5-)-methyltransferase [Helicobacter pylori 83]
Length = 434
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 61/122 (50%), Gaps = 26/122 (21%)
Query: 445 INVLSLFSGIGGAEVALHR----LGVRMKNVVSVDISEVNRNIVRSW---WEQTNQKGTL 497
+ + LF+G+GG + + +G++ + ++S SE+ ++ ++++ +++T Q
Sbjct: 29 VRFVDLFAGLGGLRLGFEQASSSIGLKSQCILS---SEIKKSALQAYIDHFKETPQ---- 81
Query: 498 IDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
D+ Q++ N I FD+++ G PC SN R GL+ +LF++ R
Sbjct: 82 ---GDITQINTNDIPN-------FDVLLAGFPCQPF--SNAGKRRGLDDTRGTLFFEIMR 129
Query: 558 IL 559
L
Sbjct: 130 FL 131
>gi|228918462|ref|ZP_04081908.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228949261|ref|ZP_04111525.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228810387|gb|EEM56744.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228841185|gb|EEM86381.1| Modification methylase Sau3AI [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 413
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 63/121 (52%), Gaps = 12/121 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLG-VRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLI--DFA 501
INV+ LF+G+GG + L ++G ++ + S+ ++ + ++ KG D A
Sbjct: 2 INVIELFAGVGGFRIGLEKIGHFQIVWGNQWEPSKKAQDAFHCYAQRFQDKGIHCNQDIA 61
Query: 502 DVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRD-GLEGKESSLFYDYFRILD 560
V + +IE ++++GG PC + + + S + G++GK+ LF++ R+++
Sbjct: 62 TVTDEEIQKIEA--------EMIVGGFPCQDYSVARSLSGEKGIQGKKGVLFWEIKRLVN 113
Query: 561 L 561
+
Sbjct: 114 I 114
>gi|16077674|ref|NP_388488.1| DNA-methyltransferase [Bacillus subtilis subsp. subtilis str. 168]
gi|221308443|ref|ZP_03590290.1| hypothetical protein Bsubs1_03408 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221312765|ref|ZP_03594570.1| hypothetical protein BsubsN3_03384 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221317688|ref|ZP_03598982.1| hypothetical protein BsubsJ_03343 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221321964|ref|ZP_03603258.1| hypothetical protein BsubsS_03414 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|452912552|ref|ZP_21961180.1| DNA (cytosine-5-)-methyltransferase family protein [Bacillus
subtilis MB73/2]
gi|81669152|sp|O34680.1|YDIP_BACSU RecName: Full=Probable BsuMI modification methylase subunit YdiP;
Short=M2.BsuMI; AltName: Full=Cytosine-specific
methyltransferase M2.BsuMI
gi|2521998|dbj|BAA22751.1| ydiP [Bacillus subtilis]
gi|2632920|emb|CAB12426.1| DNA-methyltransferase (cytosine-specific) [Bacillus subtilis subsp.
subtilis str. 168]
gi|452117580|gb|EME07974.1| DNA (cytosine-5-)-methyltransferase family protein [Bacillus
subtilis MB73/2]
Length = 389
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIGG E+ LH+ G + VD + + ++ N G I
Sbjct: 1 MKVVSLFSGIGGIELGLHQSGHTTEIFCEVD--PLAKAVL-----SKNFPGVKI------ 47
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+ D N I ++ + DLV G PC +L S ++G++G S L F +++
Sbjct: 48 EDDINEIRELPSC----DLVAAGFPCQDL--SQAGGKEGIDGSRSGLVKKLFELIE 97
>gi|417937615|ref|ZP_12580915.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK970]
gi|343391879|gb|EGV04452.1| DNA (cytosine-5-)-methyltransferase [Streptococcus infantis SK970]
Length = 390
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 15/115 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L FSG+GG R G+ + + + E ++ +S+ + KG D+
Sbjct: 3 LTFLDFFSGVGG-----FRHGLELAGMKCIGFCEKDKFARKSYEAMYDTKGEWFH-DDIT 56
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+D R+ + DL GSPC N++ + + R GL G+ S LF+ + ++
Sbjct: 57 TIDPTRLPKA-------DLWCAGSPCQNVSIAGK--RAGLYGERSGLFFTFVELI 102
>gi|422928020|ref|ZP_16960962.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|422931016|ref|ZP_16963947.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK340]
gi|339617584|gb|EGQ22206.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis ATCC
29667]
gi|339620198|gb|EGQ24768.1| DNA (cytosine-5-)-methyltransferase [Streptococcus sanguinis SK340]
Length = 407
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 16/130 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGV-------RMKNVV-SVDISEVNRNIVRSWWEQTNQKGT 496
+N + LF+G GG + LH G+ R K+ ++ + +++ SW + K
Sbjct: 15 MNYIDLFAGSGGLSLGLHNAGLEGLFAIERNKDAFKTLKFNLIDKRKHFSWPDWLEMKN- 73
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
D+ +L E + + G DLV+GG PC + + + D + + L + Y
Sbjct: 74 ----WDINELLEEHSENLASLSGKVDLVVGGPPCQGFSMAGKRQNDDVRNQ---LMHSYV 126
Query: 557 RILDLVKNMM 566
I+ LV+ M
Sbjct: 127 EIIKLVQPKM 136
>gi|417848557|ref|ZP_12494499.1| modification methylase HpaII [Streptococcus mitis SK1073]
gi|339452489|gb|EGP65117.1| modification methylase HpaII [Streptococcus mitis SK1073]
Length = 452
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + LFSGIGG + + +G +D R ++ Q I+F D++
Sbjct: 1 MRFIDLFSGIGGFRLGMESVGHECIGFCEID------KFARESYKSIFQTEGEIEFHDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
+ + +++ G D++ GG PC + + R R G E +LF++ R
Sbjct: 55 DVSDDEFKKLR---GKVDIICGGFPCQAFSIAGR--RLGFEDTRGTLFFEIAR 102
>gi|321469202|gb|EFX80183.1| hypothetical protein DAPPUDRAFT_346987 [Daphnia pulex]
Length = 1400
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 17/136 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVR----SWWEQTNQKGTLIDF 500
+ L +F+G GG LH+ GV K +++ R T+ T++
Sbjct: 926 LKTLDIFAGCGGLSEGLHQSGV-AKTYWAIECEPTAAQAFRLNNPDAAVFTDDCNTILKM 984
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSL------FYD 554
A QL+ N Q++ G +L+ GG PC +G NR + +SL + D
Sbjct: 985 AIDGQLEQN--GQVLPPKDGVELLCGGPPCQGFSGMNRFNSRQYSSFRNSLIVSYLSYCD 1042
Query: 555 YFR----ILDLVKNMM 566
Y+R IL+ V+N +
Sbjct: 1043 YYRPRFFILENVRNFV 1058
>gi|340728437|ref|XP_003402531.1| PREDICTED: LOW QUALITY PROTEIN: DNA (cytosine-5)-methyltransferase
1-like, partial [Bombus terrestris]
Length = 635
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID----- 499
+ L +F+G GG L++ G+ +N+ +++ E N R N T+
Sbjct: 237 LRTLDVFAGCGGLSEGLYQAGI-TENLWAIEKEEAAANAYR----LNNPNATVFTDDCNI 291
Query: 500 ----FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSL---- 551
DV N++ Q + G +L+ GG PC +G NR + ++SL
Sbjct: 292 LLKMVMDVSGXKTNKVGQKLPQKGQVELLCGGPPCQGFSGMNRFNSRQYSLFKNSLVVSY 351
Query: 552 --FYDYFR----ILDLVKNMM 566
+ DY+R I++ V+N +
Sbjct: 352 LSYCDYYRPNFFIMENVRNFV 372
>gi|239812977|ref|YP_002941924.1| DNA-cytosine methyltransferase [Geobacillus sp. WCH70]
gi|239809042|gb|ACS26105.1| DNA-cytosine methyltransferase [Geobacillus sp. WCH70]
Length = 370
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
N +S F+G GG ++ + R G + ++SV+I E +R +E N + D+ +
Sbjct: 3 NAISFFAGAGGLDLGIKRAGFNI--LLSVEIEETYCQTLRQNFEGLN-----VVCGDIME 55
Query: 506 LDANRI--EQMINAFGGFDLVIGGSPCNNLAGSNRH 539
R+ E + DL+IGGSPC + + + +
Sbjct: 56 YSRERVYQEAGLAEHEEVDLMIGGSPCQSFSTAGKR 91
>gi|284159927|ref|YP_001060514.2| BsaWI methylase [Burkholderia pseudomallei 668]
gi|283775103|gb|ABN83996.2| BsaWI methylase [Burkholderia pseudomallei 668]
Length = 440
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 58/132 (43%), Gaps = 26/132 (19%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVD---ISEVNRNIVR------------SWWEQTN 492
+ LF+G GG + LH G V D + RN++ +W E+TN
Sbjct: 6 IDLFAGCGGLSLGLHYAGWEGLFAVERDAMAFETLYRNMIDGAAAYPNYAAWPAWLEKTN 65
Query: 493 QKGTLIDFADVQQLDANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDGLEGKESSL 551
ID + LD + + + A G DL++GG PC + R RDG + + + L
Sbjct: 66 -----IDLTKL--LDNQQSRRQLRALSGTVDLIVGGPPCQGFSVGGR--RDGAD-ERNKL 115
Query: 552 FYDYFRILDLVK 563
+ +++LV+
Sbjct: 116 VFKMLELVELVR 127
>gi|259500984|ref|ZP_05743886.1| modification methylase EcoRII [Lactobacillus iners DSM 13335]
gi|302190566|ref|ZP_07266820.1| DNA-cytosine methyltransferase [Lactobacillus iners AB-1]
gi|259167678|gb|EEW52173.1| modification methylase EcoRII [Lactobacillus iners DSM 13335]
Length = 336
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 18/116 (15%)
Query: 444 GINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
G + LF+GIGG +AL G + + + W++ Q+ ++F D
Sbjct: 11 GYKFIDLFAGIGGFRLALESFGAKC--------------VYSNEWDKFAQETYQMNFGDT 56
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ D ++++ + D++ G PC + S + G E +LF+D RI+
Sbjct: 57 PEGDITQVDE--TSIPDHDILCAGFPCQPFSISGKQY--GFEDSRGTLFFDVARIV 108
>gi|157827820|ref|YP_001496884.1| site-specific DNA methylase [Rickettsia bellii OSU 85-389]
gi|157803124|gb|ABV79847.1| Site-specific DNA methylase [Rickettsia bellii OSU 85-389]
Length = 165
Score = 41.6 bits (96), Expect = 1.1, Method: Composition-based stats.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF GIGG AL KN+ V S++++++ ++ K D+ ++
Sbjct: 5 IDLFCGIGGFRKALES-----KNLECVFSSDIDKDVQEAYKRNFGDK----PHGDITEIP 55
Query: 508 ANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
AN+I + D++ G PC + + S + R G+E LFY+ RI
Sbjct: 56 ANKIPK-------HDILCAGFPCQSFSISGK--RGGIEDNNGKLFYEIIRI 97
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,554,021,519
Number of Sequences: 23463169
Number of extensions: 430005718
Number of successful extensions: 1052335
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 126
Number of HSP's successfully gapped in prelim test: 1324
Number of HSP's that attempted gapping in prelim test: 1050058
Number of HSP's gapped (non-prelim): 2221
length of query: 569
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 421
effective length of database: 8,886,646,355
effective search space: 3741278115455
effective search space used: 3741278115455
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)