BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008350
(569 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M548|DRM2_ARATH DNA (cytosine-5)-methyltransferase DRM2 OS=Arabidopsis thaliana
GN=DRM2 PE=1 SV=1
Length = 626
Score = 655 bits (1690), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/569 (58%), Positives = 418/569 (73%), Gaps = 24/569 (4%)
Query: 8 MGFSEEVVAKAIQENGEQ-NTDLILEALLKHSASSSASSSKSKLIDHFVGMGFSVDMVAK 66
MGF E++++AI+E G T +I++ + K+S+ A SSKSK IDHF+ MGF + V K
Sbjct: 71 MGFPVEMISRAIKETGPNVETSVIIDTISKYSSDCEAGSSKSKAIDHFLAMGFDEEKVVK 130
Query: 67 AIQENGEENTDSILETLLTY-SALGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGE 125
AIQE+GE+N ++I LL+ A + E+ D +S + D ++ D + D
Sbjct: 131 AIQEHGEDNMEAIANALLSCPEAKKLPAAVEEEDGIDWSSSDDDTNYTDMLNSDDE---- 186
Query: 126 EITNPDPDKEE---KLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADA 182
DP+ E K+ SL MG+S EAS+A+ERCG N IAELTDF+CAAQMA+
Sbjct: 187 ----KDPNSNENGSKIRSLVKMGFSELEASLAVERCGENVDIAELTDFLCAAQMAREFSE 242
Query: 183 LLAEIED-KPRPKPSNGYHKHKKRRMLDYEKPPI---DEPIRLPNPMIGFGVPSNPDVIV 238
E E+ KPR H KKRR +P DEPIRLPNPMIGFGVP+ P +I
Sbjct: 243 FYTEHEEQKPR-------HNIKKRRFESKGEPRSSVDDEPIRLPNPMIGFGVPNEPGLIT 295
Query: 239 HRSLPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNL 298
HRSLPE A GPP+FYYENVAL PKGVW+TISR L+++ PEFVDSKYFC AARKRGY+HNL
Sbjct: 296 HRSLPELARGPPFFYYENVALTPKGVWETISRHLFEIPPEFVDSKYFCVAARKRGYIHNL 355
Query: 299 PIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECD 358
PI NR + P P I++A PLS++WWP WD R+ LNC+ TC SA+LT RIR ALE +
Sbjct: 356 PINNRFQIQPPPKYTIHDAFPLSKRWWPEWDKRTKLNCILTCTGSAQLTNRIRVALEPYN 415
Query: 359 GEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRY 418
EPEPP HVQ++V+D+C+KWNLVWVG+NK APLEPDE+E +LGFPKNHTRGGG+SRT+R+
Sbjct: 416 EEPEPPKHVQRYVIDQCKKWNLVWVGKNKAAPLEPDEMESILGFPKNHTRGGGMSRTERF 475
Query: 419 KSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE 478
KSLGNSFQVDTVAYHLSVLK ++P GINVLSLF+GIGG EVALHRL ++MK VVSV+IS+
Sbjct: 476 KSLGNSFQVDTVAYHLSVLKPIFPHGINVLSLFTGIGGGEVALHRLQIKMKLVVSVEISK 535
Query: 479 VNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNR 538
VNRNI++ +WEQTNQ G LI+F+D+Q L + IE ++ +GGFDLVIGGSPCNNLAG NR
Sbjct: 536 VNRNILKDFWEQTNQTGELIEFSDIQHLTNDTIEGLMEKYGGFDLVIGGSPCNNLAGGNR 595
Query: 539 HSRDGLEGKESSLFYDYFRILDLVKNMMQ 567
SR GLEG +SSLF++Y RIL++V+ M+
Sbjct: 596 VSRVGLEGDQSSLFFEYCRILEVVRARMR 624
>sp|Q9LXE5|DRM1_ARATH DNA (cytosine-5)-methyltransferase DRM1 OS=Arabidopsis thaliana
GN=DRM1 PE=4 SV=2
Length = 624
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/565 (57%), Positives = 417/565 (73%), Gaps = 20/565 (3%)
Query: 5 FVGMGFSEEVVAKAIQENGEQNTD--LILEALLKHSASSSASSSKSKLIDHFVGMGFSVD 62
FV MGFS +++A+AI+E N + +ILE L +SAS+ ASSSKSK+I+HF+ MGF +
Sbjct: 66 FVEMGFSTQMIARAIEETAGANMEPMMILETLFNYSASTEASSSKSKVINHFIAMGFPEE 125
Query: 63 MVAKAIQENGEENTDSILETLLTYSALGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSF 122
V KA+QE+G+E+ I LLTY+ + + ++E D N D + +S +
Sbjct: 126 HVIKAMQEHGDEDVGEITNALLTYAEVDKLRESE-----DMNININDDDDDNLYSLSSDD 180
Query: 123 EGEEITNPDPDKEEKLVSLASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADA 182
E +E+ N +++ L +L MGY ++A+IA+ERCG + S+ E+ DFICAAQMA+ D
Sbjct: 181 EEDELNNSS-NEDRILQALIKMGYLREDAAIAIERCGEDASMEEVVDFICAAQMARQFDE 239
Query: 183 LLAEIEDKPRPKPSNGYHKHKKRRMLDY--EKPPIDEPIRLPNPMIGFGVPSNPDVIVHR 240
+ AE P + +KKRR KP D+ I LP MIGFGVP++P +++HR
Sbjct: 240 IYAE------PDKKELMNNNKKRRTYTETPRKPNTDQLISLPKEMIGFGVPNHPGLMMHR 293
Query: 241 S--LPEAAAGPPYFYYENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNL 298
+P+ A GPP+FYYENVA+ PKGVW IS LYD+ PEFVDSK+FCAAARKRGY+HNL
Sbjct: 294 PVPIPDIARGPPFFYYENVAMTPKGVWAKISSHLYDIVPEFVDSKHFCAAARKRGYIHNL 353
Query: 299 PIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALEECD 358
PI+NR + P I EA PL+++WWPSWD R+ LNCL TCIAS++LTE+IR+ALE D
Sbjct: 354 PIQNRFQIQPPQHNTIQEAFPLTKRWWPSWDGRTKLNCLLTCIASSRLTEKIREALERYD 413
Query: 359 GEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRY 418
GE P VQK+VM EC+KWNLVWVG+NKLAPL+ DE+E LLGFP++HTRGGGIS TDRY
Sbjct: 414 GET--PLDVQKWVMYECKKWNLVWVGKNKLAPLDADEMEKLLGFPRDHTRGGGISTTDRY 471
Query: 419 KSLGNSFQVDTVAYHLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE 478
KSLGNSFQVDTVAYHLSVLK ++P+GINVLSLF+GIGG EVALHRL ++M VVSV+IS+
Sbjct: 472 KSLGNSFQVDTVAYHLSVLKPLFPNGINVLSLFTGIGGGEVALHRLQIKMNVVVSVEISD 531
Query: 479 VNRNIVRSWWEQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNR 538
NRNI+RS+WEQTNQKG L +F DVQ+LD N IE++++ +GGFDLVIGGSPCNNLAG NR
Sbjct: 532 ANRNILRSFWEQTNQKGILREFKDVQKLDDNTIERLMDEYGGFDLVIGGSPCNNLAGGNR 591
Query: 539 HSRDGLEGKESSLFYDYFRILDLVK 563
H R GL G+ SSLF+DY RIL+ V+
Sbjct: 592 HHRVGLGGEHSSLFFDYCRILEAVR 616
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 94/222 (42%), Gaps = 46/222 (20%)
Query: 1 MIDHFVGMGFSEEVVAKAIQENGEQNTDLILEALLK------------------------ 36
+I+HF+ MGF EE V KA+QE+G+++ I ALL
Sbjct: 113 VINHFIAMGFPEEHVIKAMQEHGDEDVGEITNALLTYAEVDKLRESEDMNININDDDDDN 172
Query: 37 -HSASS-------SASSSKSKLIDHFVGMGFSVDMVAKAIQENGEENTDSILETLLTYSA 88
+S SS + SS++ +++ + MG+ + A AI+ GE D+ +E ++ +
Sbjct: 173 LYSLSSDDEEDELNNSSNEDRILQALIKMGYLREDAAIAIERCGE---DASMEEVVDFIC 229
Query: 89 LGQSSQAEQHINSDQNSPELDGSFLDGFSDTDSFEGEEITNPDPDKEEKLVSLAS--MGY 146
Q ++ I ++ + EL + + T++ P ++L+SL +G+
Sbjct: 230 AAQMARQFDEIYAEPDKKELMNNNKKRRTYTET--------PRKPNTDQLISLPKEMIGF 281
Query: 147 SV-QEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEI 187
V + M R P IA F +A + A+I
Sbjct: 282 GVPNHPGLMMHRPVPIPDIARGPPFFYYENVAMTPKGVWAKI 323
>sp|Q4W5Z4|DNM3A_CHICK DNA (cytosine-5)-methyltransferase 3A OS=Gallus gallus GN=DNMT3A
PE=2 SV=1
Length = 877
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 599 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 651
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ N ++ I +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 652 VR----NVTQKHIQEWGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 703
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 42/210 (20%)
Query: 237 IVHRSLPEAAAGPPYFY-YENVALAPKGVWDT--ISRFLYDVEPEFVDSKYFCAAARKRG 293
++H + P+ P+F+ +ENV GV D ISRFL + P +D+K AA R R
Sbjct: 702 LLHEARPKEGDDRPFFWLFENVVAM--GVSDKRDISRFL-ESNPVMIDAKEVSAAHRARY 758
Query: 294 YVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTE--RIR 351
+ NLP NR PL+ T + LQ C+ ++ + ++R
Sbjct: 759 FWGNLPGMNR---------------PLA-------STVNDKLELQECLEHGRIAKFSKVR 796
Query: 352 KALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGG 411
+ + M+E K +++W E+E + GFP ++T
Sbjct: 797 TITTRSNSIKQGKDQHFPVFMNE--KEDILWC----------TEMERVFGFPVHYTDVSN 844
Query: 412 ISRTDRYKSLGNSFQVDTVAYHLSVLKEMY 441
+SR R + LG S+ V + + + LKE +
Sbjct: 845 MSRLARQRLLGRSWSVPVIRHLFAPLKEYF 874
>sp|Q9Y6K1|DNM3A_HUMAN DNA (cytosine-5)-methyltransferase 3A OS=Homo sapiens GN=DNMT3A
PE=1 SV=4
Length = 912
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 634 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 686
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 687 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 738
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 42/210 (20%)
Query: 237 IVHRSLPEAAAGPPYFY-YENVALAPKGVWDT--ISRFLYDVEPEFVDSKYFCAAARKRG 293
++H + P+ P+F+ +ENV GV D ISRFL + P +D+K AA R R
Sbjct: 737 LLHDARPKEGDDRPFFWLFENVVAM--GVSDKRDISRFL-ESNPVMIDAKEVSAAHRARY 793
Query: 294 YVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTE--RIR 351
+ NLP NR PL+ T + LQ C+ ++ + ++R
Sbjct: 794 FWGNLPGMNR---------------PLA-------STVNDKLELQECLEHGRIAKFSKVR 831
Query: 352 KALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGG 411
+ + M+E K +++W E+E + GFP ++T
Sbjct: 832 TITTRSNSIKQGKDQHFPVFMNE--KEDILWC----------TEMERVFGFPVHYTDVSN 879
Query: 412 ISRTDRYKSLGNSFQVDTVAYHLSVLKEMY 441
+SR R + LG S+ V + + + LKE +
Sbjct: 880 MSRLARQRLLGRSWSVPVIRHLFAPLKEYF 909
>sp|Q1LZ53|DNM3A_RAT DNA (cytosine-5)-methyltransferase 3A OS=Rattus norvegicus
GN=Dnmt3a PE=2 SV=1
Length = 908
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 630 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 682
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 683 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 734
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 42/210 (20%)
Query: 237 IVHRSLPEAAAGPPYFY-YENVALAPKGVWDT--ISRFLYDVEPEFVDSKYFCAAARKRG 293
++H + P+ P+F+ +ENV GV D ISRFL + P +D+K AA R R
Sbjct: 733 LLHDARPKEGDDRPFFWLFENVVAM--GVSDKRDISRFL-ESNPVMIDAKEVSAAHRARY 789
Query: 294 YVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTE--RIR 351
+ NLP NR PL+ T + LQ C+ ++ + ++R
Sbjct: 790 FWGNLPGMNR---------------PLA-------STVNDKLELQECLEHGRIAKFSKVR 827
Query: 352 KALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGG 411
+ + M+E K +++W E+E + GFP ++T
Sbjct: 828 TITTRSNSIKQGKDQHFPVFMNE--KEDILWC----------TEMERVFGFPVHYTDVSN 875
Query: 412 ISRTDRYKSLGNSFQVDTVAYHLSVLKEMY 441
+SR R + LG S+ V + + + LKE +
Sbjct: 876 MSRLARQRLLGRSWSVPVIRHLFAPLKEYF 905
>sp|O88508|DNM3A_MOUSE DNA (cytosine-5)-methyltransferase 3A OS=Mus musculus GN=Dnmt3a
PE=1 SV=2
Length = 908
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 14/117 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISE--VNRNIVRSWWEQTNQKGTLIDFAD 502
I VLSLF GI + L LG+++ ++ ++ E + +VR +G ++ D
Sbjct: 630 IRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR-------HQGKIMYVGD 682
Query: 503 VQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
V+ + I++ +G FDLVIGGSPCN+L+ N +R GL LF++++R+L
Sbjct: 683 VRSVTQKHIQE----WGPFDLVIGGSPCNDLSIVN-PARKGLYEGTGRLFFEFYRLL 734
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 42/210 (20%)
Query: 237 IVHRSLPEAAAGPPYFY-YENVALAPKGVWDT--ISRFLYDVEPEFVDSKYFCAAARKRG 293
++H + P+ P+F+ +ENV GV D ISRFL + P +D+K AA R R
Sbjct: 733 LLHDARPKEGDDRPFFWLFENVVAM--GVSDKRDISRFL-ESNPVMIDAKEVSAAHRARY 789
Query: 294 YVHNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTE--RIR 351
+ NLP NR PL+ T + LQ C+ ++ + ++R
Sbjct: 790 FWGNLPGMNR---------------PLA-------STVNDKLELQECLEHGRIAKFSKVR 827
Query: 352 KALEECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGG 411
+ + M+E K +++W E+E + GFP ++T
Sbjct: 828 TITTRSNSIKQGKDQHFPVFMNE--KEDILWC----------TEMERVFGFPVHYTDVSN 875
Query: 412 ISRTDRYKSLGNSFQVDTVAYHLSVLKEMY 441
+SR R + LG S+ V + + + LKE +
Sbjct: 876 MSRLARQRLLGRSWSVPVIRHLFAPLKEYF 905
>sp|Q9UBC3|DNM3B_HUMAN DNA (cytosine-5)-methyltransferase 3B OS=Homo sapiens GN=DNMT3B
PE=1 SV=1
Length = 853
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 63/119 (52%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG+++ V+ ++ E + + +G + DV+
Sbjct: 575 IRVLSLFDGIATGYLVLKELGIKVGKYVASEVCEESIAV-----GTVKHEGNIKYVNDVR 629
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 630 NITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYSR 683
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 52/215 (24%)
Query: 237 IVHRSLPEAAAGPPYFY-YENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYV 295
+++ S P+ P+F+ +ENV G ISRFL + P +D+ AA R R +
Sbjct: 678 LLNYSRPKEGDDRPFFWMFENVVAMKVGDKRDISRFL-ECNPVMIDAIKVSAAHRARYFW 736
Query: 296 HNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALE 355
NLP NR P +++ LQ C+ ++ +++K
Sbjct: 737 GNLPGMNR----------------------PVIASKNDKLELQDCLEYNRIA-KLKK--- 770
Query: 356 ECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAP---------LEPDEVEMLLGFPKNH 406
VQ K N + G+N+L P L E+E + GFP ++
Sbjct: 771 -----------VQTITT----KSNSIKQGKNQLFPVVMNGKEDVLWCTELERIFGFPVHY 815
Query: 407 TRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMY 441
T + R R K LG S+ V + + + LK+ +
Sbjct: 816 TDVSNMGRGARQKLLGRSWSVPVIRHLFAPLKDYF 850
>sp|O88509|DNM3B_MOUSE DNA (cytosine-5)-methyltransferase 3B OS=Mus musculus GN=Dnmt3b
PE=1 SV=2
Length = 859
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
I VLSLF GI + L LG++++ ++ ++ + + +G + DV+
Sbjct: 581 IRVLSLFDGIATGYLVLKELGIKVEKYIASEVCAESIAV-----GTVKHEGQIKYVNDVR 635
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
++ IE+ +G FDLVIGGSPCN+L+ N +R GL LF++++ +L+ +
Sbjct: 636 KITKKNIEE----WGPFDLVIGGSPCNDLSNVN-PARKGLYEGTGRLFFEFYHLLNYTR 689
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 52/215 (24%)
Query: 237 IVHRSLPEAAAGPPYFY-YENVALAPKGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYV 295
+++ + P+ P+F+ +ENV ISRFL P +D+ AA R R +
Sbjct: 684 LLNYTRPKEGDNRPFFWMFENVVAMKVNDKKDISRFLA-CNPVMIDAIKVSAAHRARYFW 742
Query: 296 HNLPIKNRHHLVPLPPQNIYEALPLSRKWWPSWDTRSHLNCLQTCIASAKLTERIRKALE 355
NLP NR P +++ LQ C+ ++ T +++K
Sbjct: 743 GNLPGMNR----------------------PVMASKNDKLELQDCLEFSR-TAKLKK--- 776
Query: 356 ECDGEPEPPHHVQKFVMDECRKWNLVWVGRNKLAP---------LEPDEVEMLLGFPKNH 406
VQ K N + G+N+L P L E+E + GFP ++
Sbjct: 777 -----------VQTITT----KSNSIRQGKNQLFPVVMNGKDDVLWCTELERIFGFPAHY 821
Query: 407 TRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKEMY 441
T + R R K LG S+ V + + + LK+ +
Sbjct: 822 TDVSNMGRGARQKLLGRSWSVPVIRHLFAPLKDYF 856
>sp|P09915|MTBR_BPRH1 Modification methylase Rho11sI OS=Bacillus phage rho11s PE=3 SV=2
Length = 503
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIG E AL +GV + V SE+++ ++S+ N L +F DV
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVEYE---LVGFSEIDKYAIKSYCAIHNADEQL-NFGDVS 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++D ++ + FDL++GGSPC + + + R G E +LF+ Y L
Sbjct: 60 KIDKKKLPE-------FDLLVGGSPCQSFSVAG--YRKGFEDTRGTLFFQYIDTL 105
>sp|P00476|MTBS_BPSPR Modification methylase SPRI OS=Bacillus phage SPR PE=3 SV=1
Length = 439
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIG E AL +GV + V SE+++ V+S+ N L +F DV
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGVGYE---LVGFSEIDKYAVKSFCAIHNVDEQL-NFGDVS 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++D ++ + FDL++GGSPC + + + R G E +LF+ Y L
Sbjct: 60 KIDKKKLPE-------FDLLVGGSPCQSFSVAGH--RKGFEDTRGTLFFQYVETL 105
>sp|P20589|MTH3_HAEAE Modification methylase HaeIII OS=Haemophilus aegyptius GN=haeIIIM
PE=1 SV=1
Length = 330
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+N++SLFSG GG ++ + G R+ + +E +++I +++ ++N LI D+
Sbjct: 1 MNLISLFSGAGGLDLGFQKAGFRI-----ICANEYDKSIWKTY--ESNHSAKLIK-GDIS 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
++ ++ F D +IGG PC + S S G++ LFY+Y RIL
Sbjct: 53 KISSDE-------FPKCDGIIGGPPCQSW--SEGGSLRGIDDPRGKLFYEYIRIL 98
>sp|P09389|MTBB_BPSPB Modification methylase SPBetaI (Fragments) OS=Bacillus phage SPbeta
PE=3 SV=1
Length = 257
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIG E AL +GV + + SE+++ ++S+ N TL + D+
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGV---DYELIGFSEIDKYAIKSYCAIHNVSETL-NVGDIS 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
+ + I FDL+ G PC + + RDG+E K S+ +++
Sbjct: 60 KAKKDNIPY-------FDLLTSGFPCPTFSVAG--GRDGMEYKCSNCSHEHL 102
>sp|P34906|MTF1_FUSNU Modification methylase FnuDI OS=Fusobacterium nucleatum GN=fnuDIM
PE=3 SV=1
Length = 344
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 21/117 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ +LSLFSG GG ++ R G + + +E ++ I ++ + N K LI D++
Sbjct: 1 MKLLSLFSGAGGLDLGFERAGFEI-----IVANEYDKTIWETY--EKNHKAKLIK-KDIR 52
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + + + D +IGG PC + AGS R G+ LFY+Y RIL
Sbjct: 53 EILSEELPKS-------DGIIGGPPCQSWSEAGSLR----GINDPRGKLFYEYIRIL 98
>sp|P68586|MTBP_BPPHT Modification methylase Phi3TI OS=Bacillus phage phi3T GN=mtbP PE=3
SV=1
Length = 443
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIG E AL +GV + + SE+++ ++S+ N TL + D+
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGV---DYELIGFSEIDKYAIKSYCAIHNVSETL-NVGDIS 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
+ + I FDL+ G PC + + RDG+E K S+ +++
Sbjct: 60 KAKKDNIPY-------FDLLTSGFPCPTFSVAG--GRDGMEYKCSNCSHEHL 102
>sp|P68585|MTBP_BACSU Phi-3T prophage-derived modification methylase Phi3TI OS=Bacillus
subtilis (strain 168) GN=mtbP PE=3 SV=1
Length = 443
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIG E AL +GV + + SE+++ ++S+ N TL + D+
Sbjct: 4 LRVMSLFSGIGAFEAALRNIGV---DYELIGFSEIDKYAIKSYCAIHNVSETL-NVGDIS 59
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
+ + I FDL+ G PC + + RDG+E K S+ +++
Sbjct: 60 KAKKDNIPY-------FDLLTSGFPCPTFSVAG--GRDGMEYKCSNCSHEHL 102
>sp|P15446|MTH2_HAEPA Modification methylase HpaII OS=Haemophilus parainfluenzae
GN=hpaIIM PE=1 SV=1
Length = 358
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 47/115 (40%), Gaps = 16/115 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ LF+GIGG +A+ LG + I S W++ QK +F D+
Sbjct: 32 FTFIDLFAGIGGFRIAMQNLG--------------GKCIFSSEWDEQAQKTYEANFGDLP 77
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D E FD++ G PC + + + R G E +LF+D I+
Sbjct: 78 YGDITLEETKAFIPEKFDILCAGFPCQAFSIAGK--RGGFEDTRGTLFFDVAEII 130
>sp|P34879|MTS2_SHISO Modification methylase SsoII OS=Shigella sonnei GN=ssoIIM PE=3 SV=1
Length = 379
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 21/123 (17%)
Query: 441 YPDGIN----VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGT 496
YP+ N ++ LF+GIGG RLG N V+V + S W++ QK
Sbjct: 64 YPNNENGRYRMIDLFAGIGGT-----RLGFHQTNAVNV--------VFSSEWDKFAQKTY 110
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
++ D D +I++ ++++GG PC +A S + G +LF+D
Sbjct: 111 HANYGDFPDGDITKIDE--KDIPDHEILVGGFPC--VAFSQAGLKKGFNDTRGTLFFDIA 166
Query: 557 RIL 559
RI+
Sbjct: 167 RII 169
>sp|Q59606|MTF7_NEIGO Modification methylase NgoFVII OS=Neisseria gonorrhoeae GN=ngoFVIIM
PE=3 SV=1
Length = 374
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 19/119 (15%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQK--GTLIDFADVQ 504
+LSLFSG GG ++ H+ G + V + D S W ++ +K G +I D++
Sbjct: 18 ILSLFSGCGGLDLGFHQAGC--ETVWANDFSH--------WACESFRKNIGDVIVEGDIE 67
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
Q++ N D+++GG PC + S + GLEG+ +L+ + R ++ K
Sbjct: 68 QINPND-----PTIPDCDIILGGFPCQDF--SMIWKQPGLEGERGNLYKSFLRFVNAKK 119
>sp|P08455|MTP2_NEIGO Modification methylase NgoPII OS=Neisseria gonorrhoeae GN=ngoPIIM
PE=3 SV=2
Length = 330
Score = 41.6 bits (96), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ ++SLFSG GG ++ + G + +E ++ I ++ + N T + D++
Sbjct: 1 MKIISLFSGCGGLDLGFEKAGFEIPAA-----NEYDKTIWATF--KANHPKTHLIEGDIR 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNL--AGSNRHSRDGLEGKESSLFYDYFRIL 559
++ + I D +IGG PC + AG+ R G++ LF+DY RIL
Sbjct: 54 KIKEEDFPEEI------DGIIGGPPCQSWSEAGALR----GIDDARGQLFFDYIRIL 100
>sp|O34680|YDIP_BACSU Probable BsuMI modification methylase subunit YdiP OS=Bacillus
subtilis (strain 168) GN=ydiP PE=2 SV=1
Length = 389
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ V+SLFSGIGG E+ LH+ G + VD + + ++ N G I
Sbjct: 1 MKVVSLFSGIGGIELGLHQSGHTTEIFCEVD--PLAKAVL-----SKNFPGVKI------ 47
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
+ D N I ++ + DLV G PC +L S ++G++G S L F +++
Sbjct: 48 EDDINEIRELPSC----DLVAAGFPCQDL--SQAGGKEGIDGSRSGLVKKLFELIE 97
>sp|P25263|MTC1_HERAU Modification methylase HgiCI OS=Herpetosiphon aurantiacus GN=hgiCIM
PE=3 SV=2
Length = 420
Score = 41.2 bits (95), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 22/119 (18%)
Query: 445 INVLSLFSGIGGA----EVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
+ + LF+GIGG E A+H LG+ V+S SE++++ ++ ++F
Sbjct: 2 LKFIDLFAGIGGMRLGFEQAMHELGIETACVLS---SEIDKHAQTTYA---------MNF 49
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
+ Q D +I+ F FD ++ G PC + + + + G +LF++ RIL
Sbjct: 50 HEQSQGDITQIQD----FPSFDFLLAGFPCQPFSYAGK--QKGFGDTRGTLFFEIERIL 102
>sp|P25266|MTE1_HERAU Modification methylase HgiEI OS=Herpetosiphon aurantiacus GN=hgiEIM
PE=3 SV=1
Length = 437
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 55/119 (46%), Gaps = 26/119 (21%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGT---LIDFADVQ 504
+ LF+GIGG RLG+ V V +E+++ ++ +W+ G L D +Q
Sbjct: 7 IDLFAGIGG-----FRLGLEAVGGVCVASAEIDQQAIKVYWQNWPTDGVDHNLGDITQIQ 61
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
QL A+ D+++GG PC ++AG N+ + L+ D R++ +
Sbjct: 62 QLPAH------------DVLVGGVPCQPWSIAGKNQ----AFDDPRGQLWADVIRLVQI 104
>sp|Q92072|DNMT1_CHICK DNA (cytosine-5)-methyltransferase 1 OS=Gallus gallus GN=DNMT1 PE=1
SV=1
Length = 1537
Score = 40.8 bits (94), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L +FSG GG H+ GV + + ++++ E R N GT + D
Sbjct: 1054 LRTLDVFSGCGGLSEGFHQAGVS-ETLWAIEMWEPAAQAFR-----LNNPGTTVFTEDCN 1107
Query: 505 QL--------DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSL----- 551
L N + Q + G +++ GG PC +G NR + ++SL
Sbjct: 1108 VLLKLVMSGEKTNSLGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFL 1167
Query: 552 -FYDYFR----ILDLVKNMM 566
+ DY+R +L+ V+N +
Sbjct: 1168 SYCDYYRPRFFLLENVRNFV 1187
>sp|P34882|MTAA_SYNP2 Modification methylase AquI subunit alpha OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=aquIMA PE=3
SV=1
Length = 248
Score = 40.0 bits (92), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 8/114 (7%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
++SLFSG GG ++ H G V D S N + + + +G +
Sbjct: 4 KLISLFSGAGGMDIGFHAAGFSTAVAVEQDPSCCN-TLRLNMPDTPVIEGDITSITTQVI 62
Query: 506 LDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
L+A ++ + DLVIGG PC + + + + R G++ L ++ R++
Sbjct: 63 LEAAKVNPL-----EIDLVIGGPPCQSFSLAGK--RMGMDDPRGMLVLEFLRVV 109
>sp|Q9Z330|DNMT1_RAT DNA (cytosine-5)-methyltransferase 1 OS=Rattus norvegicus GN=Dnmt1
PE=1 SV=2
Length = 1622
Score = 40.0 bits (92), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L +FSG GG H+ G+ + + ++++ E R N GT + D
Sbjct: 1144 LRTLDVFSGCGGLTEGFHQAGI-SETLWAIEMWEPAAQAFR-----LNNPGTTVFTEDCN 1197
Query: 505 QL--------DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSL----- 551
L N + Q + G +++ GG PC +G NR + ++SL
Sbjct: 1198 VLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFL 1257
Query: 552 -FYDYFR----ILDLVKNMM 566
+ DY+R +L+ V+N +
Sbjct: 1258 SYCDYYRPRFFLLENVRNFV 1277
>sp|P34877|MTSA_LACLC Modification methylase ScrFIA OS=Lactococcus lactis subsp. cremoris
GN=scrFIAM PE=3 SV=1
Length = 389
Score = 40.0 bits (92), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 447 VLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQL 506
++ LF+GIGG + H + + V SV SE+++ ++++ +F D
Sbjct: 81 MIDLFAGIGGTRLGFH----QTEKVKSVFSSEIDKFAIKTYK---------ANFGDEPHG 127
Query: 507 DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D +I++ D+++GG PC A S + G + +LF++ RI+
Sbjct: 128 DITKIDE--KDIPDHDILVGGFPCQ--AFSQAGKKLGFDDTRGTLFFEIARII 176
>sp|P25264|MTC2_HERAU Modification methylase HgiCII OS=Herpetosiphon aurantiacus
GN=hgiCIIM PE=3 SV=1
Length = 437
Score = 39.7 bits (91), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 22/100 (22%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSW---WEQTNQKGTLIDFADVQ 504
+ LF+GIGG RLG+ + V +E+++ ++ + W + L D +Q
Sbjct: 7 IDLFAGIGG-----FRLGLEAVGGICVGSAEIDQQAIKVYRQNWPTDRSEHNLGDITTLQ 61
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRD 542
QL A+ DLV+GG PC ++AG N+ D
Sbjct: 62 QLPAH------------DLVVGGVPCQPWSIAGKNQAFDD 89
>sp|P31974|MTA1_CELCE Modification methylase AluI OS=Cellulosimicrobium cellulans
GN=aluIM PE=3 SV=1
Length = 521
Score = 39.3 bits (90), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 446 NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQ 505
+ + LF+GIGG AL G + V +D E R+W K L D D
Sbjct: 9 SFVDLFAGIGGFHAALAATGGVCEYAVEID-REAAAVYERNW-----NKPALGDITD--- 59
Query: 506 LDANRIEQMINAFGG-FDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILD 560
DAN + + G D++ GG PC + S ++ G+ +LF++ RI++
Sbjct: 60 -DANDEGVTLRGYDGPIDVLTGGFPCQPFSKSG--AQHGMAETRGTLFWNIARIIE 112
>sp|Q27746|DNMT1_PARLI DNA (cytosine-5)-methyltransferase PliMCI OS=Paracentrotus lividus
GN=DNMT PE=2 SV=1
Length = 1612
Score = 38.9 bits (89), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 62/140 (44%), Gaps = 24/140 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L +F+G GG H+ G+ ++ +++ E R N G+ + D
Sbjct: 1131 LKCLDVFAGCGGLSEGFHQAGI-CESSWAIEKEEPAAQAYR-----LNNPGSTVFSDDCN 1184
Query: 505 QL--------DANRIEQMINAFGGFDLVIGGSPCNNLAGSNR-HSRDGLEGKESSL---- 551
+L +R Q + G +L+ GG PC +G NR +SR+ + K S +
Sbjct: 1185 ELLRLVMQGEKTSRTGQKLPQKGDVELLCGGPPCQGFSGMNRFNSREYSKFKNSLISSYL 1244
Query: 552 -FYDYFR----ILDLVKNMM 566
+ DY+R +L+ V+N +
Sbjct: 1245 SYCDYYRPRFFLLENVRNFV 1264
>sp|P50185|MTD5_DACSA Modification methylase DsaV OS=Dactylococcopsis salina GN=dsaVM
PE=3 SV=1
Length = 351
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 18/121 (14%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLID 499
M + + LF+GIGG + LG + V SE++++ R++ + T
Sbjct: 1 MEKKQLKFIDLFAGIGGMRIPFEELGGK-----CVFSSEIDKHCQRTYEANFGEMPT--- 52
Query: 500 FADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ +L A+ I DL++ G PC + R + G + + LF+ +IL
Sbjct: 53 -GDITKLSADSIPYH-------DLLLAGFPCQAFSQGGR--KQGFQDERGQLFFQVAKIL 102
Query: 560 D 560
+
Sbjct: 103 N 103
>sp|P13864|DNMT1_MOUSE DNA (cytosine-5)-methyltransferase 1 OS=Mus musculus GN=Dnmt1 PE=1
SV=5
Length = 1620
Score = 38.5 bits (88), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 24/140 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L +FSG GG H+ G+ + + ++++ + R N GT + D
Sbjct: 1142 LRTLDVFSGCGGLSEGFHQAGIS-ETLWAIEMWDPAAQAFR-----LNNPGTTVFTEDCN 1195
Query: 505 QL--------DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSL----- 551
L N + Q + G +++ GG PC +G NR + ++SL
Sbjct: 1196 VLLKLVMAGEVTNSLGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFL 1255
Query: 552 -FYDYFR----ILDLVKNMM 566
+ DY+R +L+ V+N +
Sbjct: 1256 SYCDYYRPRFFLLENVRNFV 1275
>sp|P50196|MTE8_ECOLX Modification methylase Eco47II OS=Escherichia coli GN=eco47IIM PE=3
SV=1
Length = 417
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 22/129 (17%)
Query: 436 VLKEMYPDGI-------NVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWW 488
+ K +PD VL LF+G GG + L + G++ SV ++E++ + ++
Sbjct: 65 LFKSQWPDETKISNNVYTVLELFAGAGGMALGLEKAGLK-----SVLLNEIDSHACKTL- 118
Query: 489 EQTNQKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKE 548
+ N+ + DV Q+D + D++ GG PC + + + + G E
Sbjct: 119 -RKNRPEWNVVEGDVSQVDFTPYRNTV------DVLAGGFPCQAFSYAGK--KLGFEDTR 169
Query: 549 SSLFYDYFR 557
+LF+++ R
Sbjct: 170 GTLFFEFAR 178
>sp|P50182|MTN4_NEILA Modification methylase NlaIV OS=Neisseria lactamica GN=nlaIVM PE=3
SV=1
Length = 423
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 19/119 (15%)
Query: 445 INVLSLFSGIGGA----EVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
I + LFSG+ G E A + V K V + +I +++ + + +
Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACKCVFTSEIKPAALEVLKQNYPDE------VPY 57
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ +++ I FD+++ G PC + + + R G E +LF+D RIL
Sbjct: 58 GDITKIETGDIPD-------FDILLAGFPCQAFSFAGK--RLGFEDTRGTLFFDVARIL 107
>sp|O14717|TRDMT_HUMAN tRNA (cytosine(38)-C(5))-methyltransferase OS=Homo sapiens
GN=TRDMT1 PE=1 SV=1
Length = 391
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%)
Query: 387 KLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKE 439
KL P E+ LLGFP I+ RY+ LGNS V VA + +L E
Sbjct: 339 KLRYFTPKEIANLLGFPPEFGFPEKITVKQRYRLLGNSLNVHVVAKLIKILYE 391
Score = 35.8 bits (81), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 15/123 (12%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VL L+SG+GG AL + + V ++D++ V + + + T I+ ++
Sbjct: 4 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLE 63
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVKN 564
+ D R+ FD+++ PC R D + + +S + ILD++
Sbjct: 64 EFD--RL--------SFDMILMSPPCQPFTRIGRQG-DMTDSRTNS----FLHILDILPR 108
Query: 565 MMQ 567
+ +
Sbjct: 109 LQK 111
>sp|P50192|MTHA_HAEPH Modification methylase HphIA OS=Haemophilus parahaemolyticus
GN=hphIAM PE=3 SV=1
Length = 372
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 440 MYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWW--EQTNQKGTL 497
+Y + + LFSG GG + R G ++SV+I + R+ + Q Q+
Sbjct: 40 IYCMSLTYIDLFSGAGGFSLGFDRAG--FHQLLSVEIEPHYCDTYRANFPDHQVLQQ--- 94
Query: 498 IDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFR 557
D+ L + + + IN D+VIGG PC + + + R + + LF ++ R
Sbjct: 95 ----DLTTLSDDNLLRHINH-RKVDVVIGGPPCQGFSMAGKIGRTFADDPRNHLFKEFVR 149
Query: 558 ILDLVK 563
++ L +
Sbjct: 150 VVKLTQ 155
>sp|Q4G073|TRDMT_RAT tRNA (cytosine(38)-C(5))-methyltransferase OS=Rattus norvegicus
GN=Trdmt1 PE=2 SV=1
Length = 391
Score = 37.7 bits (86), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 17/124 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ VL L+SGIGG AL V V ++D+S V + + + T+ I+ ++
Sbjct: 4 LRVLELYSGIGGMHHALRESRVPAHVVAAIDVSTVANEVYKHNFPHTHLLAKTIEGISLE 63
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF-RILDLVK 563
+ D F++++ PC +R GL+G S + F ILD++
Sbjct: 64 EFDKL----------SFNMILMSPPCQPF------TRIGLQGDMSDRRTNSFLYILDILP 107
Query: 564 NMMQ 567
+ +
Sbjct: 108 RLQK 111
Score = 35.8 bits (81), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 26/53 (49%)
Query: 387 KLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNSFQVDTVAYHLSVLKE 439
KL P E+ LLGFP + RY+ LGNS V V+ L+VL E
Sbjct: 339 KLRYFTPKEIANLLGFPPEFGFPEKTTVKQRYRLLGNSLNVHVVSKLLTVLCE 391
>sp|P25262|MTB1_HERAU Modification methylase HgiBI OS=Herpetosiphon aurantiacus GN=hgiBIM
PE=3 SV=1
Length = 437
Score = 37.4 bits (85), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 20/116 (17%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
+ LF+GIGG + L +G V S +I + + R W L D +QQL
Sbjct: 7 IDLFAGIGGFRLGLEAVGGVC--VASAEIDQQAIKVYRQNWPTDGVDHNLGDITAIQQLP 64
Query: 508 ANRIEQMINAFGGFDLVIGGSPCN--NLAGSNRHSRDGLEGKESSLFYDYFRILDL 561
A+ D+++GG PC ++AG N+ D L+ D R++ +
Sbjct: 65 AH------------DVLVGGVPCQPWSIAGKNQAFDD----PRGQLWADVIRLVQI 104
>sp|P05102|MTH1_HAEPH Modification methylase HhaI OS=Haemophilus parahaemolyticus
GN=hhaIM PE=1 SV=1
Length = 327
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 18/123 (14%)
Query: 437 LKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGT 496
+K+ G+ + LF+G+GG +AL G + + W++ Q+
Sbjct: 4 IKDKQLTGLRFIDLFAGLGGFRLALESCGAEC--------------VYSNEWDKYAQEVY 49
Query: 497 LIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYF 556
++F + + D ++ + D++ G PC + S + G E +LF+D
Sbjct: 50 EMNFGEKPEGDITQVNE--KTIPDHDILCAGFPCQAFSISGKQK--GFEDSRGTLFFDIA 105
Query: 557 RIL 559
RI+
Sbjct: 106 RIV 108
>sp|P24581|MTNX_NEILA Cytosine-specific methyltransferase NlaX OS=Neisseria lactamica
GN=nlaXM PE=3 SV=1
Length = 313
Score = 37.0 bits (84), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 15/115 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
++ LF+GIGG + + +V V SE+++ V+++ Q N G + D+
Sbjct: 2 FKIIDLFAGIGGIRLGFEQA---FDDVRCVFSSEIDKYAVQTY--QANHGGETV-CGDIT 55
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
Q D I D++ G PC S + G +LF+D RIL
Sbjct: 56 QTDVADIPDH-------DILSAGFPCQPF--SQAGLKKGFADTRGTLFFDIERIL 101
>sp|P36216|MTC1_PBCVI Modification methylase CviJI OS=Paramecium bursaria Chlorella virus
IL3A GN=CVIJIM PE=3 SV=1
Length = 367
Score = 37.0 bits (84), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 17/119 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
L LF+GI G L + V V+I+E + +++ + + F DV
Sbjct: 3 FRTLELFAGIAGISHGLRGIST---PVAFVEINEDAQKFLKTKFSDASV------FNDVT 53
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRILDLVK 563
+ + + I D++ G PC + + SR G E KES LF D RI + K
Sbjct: 54 KFTKSDFPEDI------DMITAGFPCTGFSIAG--SRTGFEHKESGLFADVVRITEEYK 104
>sp|Q96LT4|SAMD8_HUMAN Sphingomyelin synthase-related protein 1 OS=Homo sapiens GN=SAMD8
PE=1 SV=2
Length = 415
Score = 36.6 bits (83), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 7/110 (6%)
Query: 141 LASMGYSVQEASIAMERCGPNTSIAELTDFICAAQMAKAADALLAEIEDKPRPKPSNGYH 200
L MGY+ +M P S + TD++C +++ D + ++ + + + NG +
Sbjct: 83 LEEMGYNSDSPMGSMT---PFISALQSTDWLCNGELSHDCDGPITDL-NSDQYQYMNGKN 138
Query: 201 KHKKRRMLDYEKPPIDEPIRLPNPMIGFGVPSNPDVIVHRSLPEAAAGPP 250
KH RR+ I I + I FG S VIVH +P+ PP
Sbjct: 139 KHSVRRLDPEYWKTILSCIYV---FIVFGFTSFIMVIVHERVPDMQTYPP 185
>sp|P43420|MTB6_BACSF Modification methylase Bsp6I OS=Bacillus sp. (strain RFL6)
GN=bsp6IM PE=3 SV=1
Length = 315
Score = 36.6 bits (83), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 17/116 (14%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ + SLF+G+GG ++ + G +V +E ++N ++ Q+N K LI D++
Sbjct: 2 LQIASLFAGVGGIDLGFEQTGY----FETVWANEYDKNAAITY--QSNFKNKLI-IDDIR 54
Query: 505 QLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESS-LFYDYFRIL 559
+ + FD+++ G PC + + + R G E ++S LF++ R++
Sbjct: 55 NIKVEDVPD-------FDVLLSGFPCTSFSVAG--YRKGFEDEKSGDLFFETLRLI 101
>sp|P11408|MTM1_MORSP Modification methylase MspI OS=Moraxella sp. GN=mspIM PE=3 SV=1
Length = 418
Score = 36.2 bits (82), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 74/187 (39%), Gaps = 40/187 (21%)
Query: 262 KGVWDTISRFLYDVEPEFVDSKYFCAAARKRGYVHNLPIKNRHHLVPLPPQNIYEALPLS 321
K + +T+ Y V +D+ +F +++ R +LV QNI+ P
Sbjct: 228 KVIIETLEDMGYKVHHTVLDASHFGIPQKRK----------RFYLVAFLNQNIHFEFP-- 275
Query: 322 RKWWPSWDTRSHLNCLQTCIASAKLTERIRKA--LEECDGEPE---------------PP 364
P ++ L++ + ++E ++K+ ++ DG+P
Sbjct: 276 ---KPPMISKDIGEVLESDVTGYSISEHLQKSYLFKKDDGKPSLIDKNTTGAVKTLVSTY 332
Query: 365 HHVQKFVMDECRKWNLVWVGRNKLAPLEPDEVEMLLGFPKNHTRGGGISRTDRYKSLGNS 424
H +Q+ V G + L +E + ++GFPK+ +SRT Y+ +GNS
Sbjct: 333 HKIQRLT------GTFVKDGETGIRLLTTNECKAIMGFPKDFVIP--VSRTQMYRQMGNS 384
Query: 425 FQVDTVA 431
V V
Sbjct: 385 VVVPVVT 391
Score = 36.2 bits (82), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 19/133 (14%)
Query: 433 HLSVLKEMYPDGINVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTN 492
H+ K+ Y + LFSGIGG + G + V SE++ +++
Sbjct: 93 HIEERKDAYSSDFKFIDLFSGIGGIRQSFEVNGGK-----CVFSSEIDPFAKFTYYTNFG 147
Query: 493 QKGTLIDFADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEG-KESSL 551
++ F D+ +++A I Q D++ G PC + + R+G E + ++
Sbjct: 148 ----VVPFGDITKVEATTIPQH-------DILCAGFPCQPFSHIGK--REGFEHPTQGTM 194
Query: 552 FYDYFRILDLVKN 564
F++ RI++ K
Sbjct: 195 FHEIVRIIETKKT 207
>sp|P09795|MTS1_SALIN Modification methylase SinI OS=Salmonella infantis GN=sinIM PE=3
SV=1
Length = 461
Score = 36.2 bits (82), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 12/113 (10%)
Query: 448 LSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQQLD 507
LS FSG G ++ + + G + +++ +I + R+ + S + + D++
Sbjct: 78 LSFFSGAMGLDLGIEQAG--FETLLASEIDKAARDTILS------NRPNMALIGDIRDYT 129
Query: 508 ANRIEQMINAFGG--FDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRI 558
I ++ G DL++GG PC A S R GLE + ++F Y +
Sbjct: 130 TEDILKLAGVSSGNEIDLIMGGPPCQ--AFSTAGKRLGLEDERGNVFIKYLDV 180
>sp|Q59605|MTB5_NEIGO Modification methylase NgoBV OS=Neisseria gonorrhoeae GN=ngoBVM
PE=3 SV=1
Length = 423
Score = 36.2 bits (82), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 19/119 (15%)
Query: 445 INVLSLFSGIGGA----EVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDF 500
I + LFSG+ G E A + V + V + +I +++ + + +
Sbjct: 4 IKFIDLFSGMSGIRKGFEQACRKQSVACECVFTSEIKPAALEVLKQNYPDE------VPY 57
Query: 501 ADVQQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
D+ +++ I FD+++ G PC + + + R G E +LF+D RIL
Sbjct: 58 GDITKIETGDIPD-------FDILLAGFPCQAFSFAGK--RLGFEDTRGTLFFDVARIL 107
>sp|P34881|DNMT1_ARATH DNA (cytosine-5)-methyltransferase 1 OS=Arabidopsis thaliana GN=DMT1
PE=1 SV=1
Length = 1534
Score = 36.2 bits (82), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 36/158 (22%)
Query: 445 INVLSLFSGIGGAEVALHRLGV--------------------RMKNVVSVDISEVNRNIV 484
+ L +F+G GG L + GV ++ V VD V I+
Sbjct: 1093 LATLDIFAGCGGLSHGLKKAGVSDAKWAIEYEEPAGQAFKQNHPESTVFVDNCNV---IL 1149
Query: 485 RSWWEQTNQKGTLIDFADVQQLDANRIEQMINAF---GGFDLVIGGSPCNNLAGSNRHSR 541
R+ E+ + + + +L A E+ + G D + GG PC +G NR ++
Sbjct: 1150 RAIMEKGGDQDDCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFSGMNRFNQ 1209
Query: 542 DGLEGKESSL------FYDYFR----ILDLVKNMMQRN 569
+ + F DYFR +L+ V+ + N
Sbjct: 1210 SSWSKVQCEMILAFLSFADYFRPRYFLLENVRTFVSFN 1247
>sp|P19888|MTBA_BACAR Modification methylase BanI OS=Bacillus aneurinolyticus GN=banIM
PE=1 SV=1
Length = 428
Score = 35.8 bits (81), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 16/116 (13%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMK-NVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADV 503
I + LF+GIGG + R R + V SE+++ ++ ++F +
Sbjct: 3 IKFVDLFAGIGGIRIGFERAAKRFELETECVLSSEIDKKACETYA---------LNFKEE 53
Query: 504 QQLDANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSLFYDYFRIL 559
Q D + I +F FD ++ G PC + + + + G +LF++ R+L
Sbjct: 54 PQGDIHE----ITSFPEFDFLLAGFPCQPFSYAGK--QQGFGDTRGTLFFEVERVL 103
>sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3 OS=Arabidopsis thaliana
GN=CMT3 PE=1 SV=2
Length = 839
Score = 35.8 bits (81), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 519 GGFDLVIGGSPCNNLAGSNRHSR--DGLEGKESSLFYDYFRILDLVK 563
GG D+V GG PC ++G NR D LE +++ Y I++ +K
Sbjct: 449 GGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEYLK 495
>sp|P26358|DNMT1_HUMAN DNA (cytosine-5)-methyltransferase 1 OS=Homo sapiens GN=DNMT1 PE=1
SV=2
Length = 1616
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 24/140 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L +FSG GG H+ G+ + ++++ + R N G+ + D
Sbjct: 1139 LRTLDVFSGCGGLSEGFHQAGI-SDTLWAIEMWDPAAQAFR-----LNNPGSTVFTEDCN 1192
Query: 505 QL--------DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSL----- 551
L N Q + G +++ GG PC +G NR + ++SL
Sbjct: 1193 ILLKLVMAGETTNSRGQRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFL 1252
Query: 552 -FYDYFR----ILDLVKNMM 566
+ DY+R +L+ V+N +
Sbjct: 1253 SYCDYYRPRFFLLENVRNFV 1272
>sp|Q24K09|DNMT1_BOVIN DNA (cytosine-5)-methyltransferase 1 OS=Bos taurus GN=DNMT1 PE=2 SV=1
Length = 1611
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 58/140 (41%), Gaps = 24/140 (17%)
Query: 445 INVLSLFSGIGGAEVALHRLGVRMKNVVSVDISEVNRNIVRSWWEQTNQKGTLIDFADVQ 504
+ L +FSG GG H+ G+ + + ++++ + R N G+ + D
Sbjct: 1136 LRTLDVFSGCGGLSEGFHQAGI-SETLWAIEMWDPAAQAFR-----LNNPGSTVFTEDCN 1189
Query: 505 QL--------DANRIEQMINAFGGFDLVIGGSPCNNLAGSNRHSRDGLEGKESSL----- 551
L N Q + G +++ GG PC +G NR + ++SL
Sbjct: 1190 VLLKLVMAGEVTNSRGQKLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFL 1249
Query: 552 -FYDYFR----ILDLVKNMM 566
+ DY+R +L+ V+N +
Sbjct: 1250 SYCDYYRPRYFLLENVRNFV 1269
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 227,171,986
Number of Sequences: 539616
Number of extensions: 10270188
Number of successful extensions: 27037
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 26939
Number of HSP's gapped (non-prelim): 120
length of query: 569
length of database: 191,569,459
effective HSP length: 123
effective length of query: 446
effective length of database: 125,196,691
effective search space: 55837724186
effective search space used: 55837724186
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)