Query 008351
Match_columns 569
No_of_seqs 237 out of 1733
Neff 9.0
Searched_HMMs 29240
Date Tue Mar 26 00:09:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008351.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008351hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 5E-100 2E-104 827.5 55.0 512 23-569 1-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 2.4E-97 8E-102 798.8 53.8 467 22-552 64-545 (580)
3 1v10_A Laccase; multicopper bl 100.0 1.3E-94 4.5E-99 778.2 44.4 481 19-569 17-508 (521)
4 3pxl_A Laccase; 4-copper prote 100.0 8.3E-94 2.9E-98 763.2 47.7 458 25-551 3-471 (499)
5 3t6v_A Laccase; beta barrel, o 100.0 7.9E-93 2.7E-97 755.8 53.2 458 26-551 5-471 (495)
6 1zpu_A Iron transport multicop 100.0 1.6E-93 5.6E-98 770.4 46.7 462 24-551 1-481 (534)
7 2q9o_A Laccase-1; multicopper 100.0 7.6E-91 2.6E-95 754.4 55.7 471 21-552 29-522 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 3E-90 1E-94 741.9 42.5 471 26-569 5-487 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 9.8E-84 3.3E-88 681.1 39.3 405 22-550 13-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 2.7E-83 9.1E-88 678.3 31.8 407 24-553 17-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 2.5E-81 8.4E-86 674.1 38.3 421 25-553 36-477 (534)
12 2wsd_A Spore coat protein A; o 100.0 1.5E-80 5.1E-85 668.3 38.3 427 24-551 24-510 (513)
13 3zx1_A Oxidoreductase, putativ 100.0 9.4E-80 3.2E-84 650.7 40.2 417 21-550 46-480 (481)
14 3aw5_A Multicopper oxidase; be 100.0 4.6E-79 1.6E-83 644.8 33.7 385 47-550 28-448 (448)
15 3gyr_A PHS, phenoxazinone synt 100.0 2.5E-78 8.6E-83 670.0 38.0 468 23-554 30-594 (612)
16 3od3_A Blue copper oxidase CUE 100.0 1.2E-78 4.2E-83 641.6 33.7 428 23-549 15-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 4.6E-76 1.6E-80 637.2 42.3 442 23-552 30-592 (612)
18 3g5w_A Multicopper oxidase typ 100.0 4.3E-55 1.5E-59 441.3 29.5 272 24-312 1-278 (318)
19 2j5w_A Ceruloplasmin, ferroxid 100.0 5.9E-54 2E-58 495.7 38.4 275 12-313 8-359 (1065)
20 2zwn_A Two-domain type laccase 100.0 3.1E-53 1.1E-57 432.6 33.1 272 24-312 2-279 (339)
21 2r7e_A Coagulation factor VIII 100.0 1.6E-55 5.5E-60 489.1 16.6 241 29-293 50-318 (742)
22 2dv6_A Nitrite reductase; elec 100.0 3.9E-49 1.3E-53 419.3 30.2 397 22-553 25-435 (447)
23 3gdc_A Multicopper oxidase; be 100.0 1.3E-48 4.4E-53 389.4 29.5 248 23-308 32-286 (288)
24 1kbv_A ANIA, major outer membr 100.0 1.9E-48 6.5E-53 395.3 29.3 262 21-312 34-309 (327)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 1.6E-46 5.3E-51 433.8 23.7 404 41-554 615-1061(1065)
26 3kw8_A Laccase, putative coppe 100.0 8.9E-46 3E-50 366.7 25.1 239 21-311 3-266 (276)
27 3tas_A Small laccase, multi-co 100.0 4.9E-46 1.7E-50 375.0 23.6 241 20-312 8-273 (313)
28 3t9w_A Small laccase, multi-co 100.0 8.3E-46 2.8E-50 370.3 23.6 241 20-311 24-288 (299)
29 2zoo_A Probable nitrite reduct 100.0 1.7E-44 5.7E-49 382.8 29.1 265 21-313 24-300 (442)
30 1mzy_A Copper-containing nitri 100.0 3.9E-44 1.3E-48 365.4 30.1 269 21-312 28-320 (333)
31 1oe1_A Dissimilatory copper-co 100.0 8E-43 2.7E-47 356.4 28.1 269 21-312 28-320 (336)
32 2bw4_A Copper-containing nitri 100.0 3.5E-43 1.2E-47 359.7 25.1 268 21-312 34-326 (340)
33 3cg8_A Laccase; oxidoreductase 100.0 1.5E-42 5.1E-47 353.2 25.5 237 22-311 45-307 (343)
34 1sdd_B Coagulation factor V; c 100.0 5.3E-41 1.8E-45 371.5 26.8 263 22-309 3-326 (647)
35 2dv6_A Nitrite reductase; elec 100.0 1.4E-39 4.8E-44 345.7 31.9 260 22-312 160-435 (447)
36 1sdd_A Coagulation factor V; c 100.0 1.4E-42 4.8E-47 348.9 8.1 217 44-292 49-288 (306)
37 2r7e_B Coagulation factor VIII 100.0 6.7E-41 2.3E-45 372.3 8.4 251 22-292 130-444 (770)
38 2r7e_A Coagulation factor VIII 100.0 1.6E-37 5.5E-42 344.8 4.7 218 52-292 448-699 (742)
39 3gdc_A Multicopper oxidase; be 100.0 3.8E-30 1.3E-34 256.1 17.2 234 188-550 54-287 (288)
40 3cg8_A Laccase; oxidoreductase 100.0 5.6E-29 1.9E-33 253.1 15.9 218 209-554 75-309 (343)
41 2zwn_A Two-domain type laccase 100.0 2.7E-28 9.2E-33 248.5 18.7 246 188-552 23-278 (339)
42 3g5w_A Multicopper oxidase typ 100.0 1.8E-28 6.2E-33 247.0 17.1 247 189-553 23-278 (318)
43 3kw8_A Laccase, putative coppe 100.0 3E-28 1E-32 240.9 16.0 219 209-554 34-268 (276)
44 3t9w_A Small laccase, multi-co 100.0 2.4E-28 8.1E-33 244.0 15.1 218 209-553 56-289 (299)
45 3tas_A Small laccase, multi-co 99.9 6.9E-27 2.3E-31 235.3 17.9 219 209-554 40-274 (313)
46 1sdd_A Coagulation factor V; c 99.9 2.2E-25 7.4E-30 223.7 0.6 236 191-552 52-301 (306)
47 1sdd_B Coagulation factor V; c 99.9 1.8E-22 6.2E-27 223.2 16.9 238 209-551 67-327 (647)
48 1kbv_A ANIA, major outer membr 99.9 1.4E-21 4.8E-26 197.8 21.7 241 188-553 58-309 (327)
49 2bw4_A Copper-containing nitri 99.9 1.5E-21 5.2E-26 199.2 21.9 94 445-554 231-327 (340)
50 1mzy_A Copper-containing nitri 99.9 3.6E-20 1.2E-24 188.4 22.3 94 445-553 225-320 (333)
51 2r7e_B Coagulation factor VIII 99.8 4.3E-22 1.5E-26 221.4 1.4 88 445-550 368-455 (770)
52 1oe1_A Dissimilatory copper-co 99.8 1.3E-18 4.3E-23 177.3 24.0 265 188-555 53-322 (336)
53 2zoo_A Probable nitrite reduct 99.8 5.7E-19 2E-23 186.7 20.2 240 188-554 48-300 (442)
54 2uxt_A Protein SUFI, SUFI; oxi 99.8 2.4E-18 8.1E-23 181.6 23.2 251 25-310 152-441 (451)
55 2xu9_A Laccase; oxidoreductase 99.8 1.9E-18 6.4E-23 182.2 20.2 234 25-292 146-428 (439)
56 1v10_A Laccase; multicopper bl 99.7 1.3E-16 4.5E-21 171.3 22.3 252 44-309 191-490 (521)
57 1hfu_A Laccase 1; oxidoreducta 99.7 2.7E-16 9.2E-21 168.3 23.7 273 27-309 143-469 (503)
58 3zx1_A Oxidoreductase, putativ 99.7 4.7E-16 1.6E-20 164.2 19.6 241 26-292 181-469 (481)
59 3t6v_A Laccase; beta barrel, o 99.7 3.9E-15 1.3E-19 158.2 23.0 245 43-292 167-459 (495)
60 1zpu_A Iron transport multicop 99.7 6.7E-15 2.3E-19 158.3 23.9 227 44-292 167-469 (534)
61 3pxl_A Laccase; 4-copper prote 99.7 5.3E-15 1.8E-19 157.2 21.4 244 43-292 165-459 (499)
62 1aoz_A Ascorbate oxidase; oxid 99.6 7.1E-15 2.4E-19 159.2 21.9 217 57-292 205-513 (552)
63 3od3_A Blue copper oxidase CUE 99.6 3.8E-15 1.3E-19 157.2 18.7 251 26-292 151-478 (488)
64 3aw5_A Multicopper oxidase; be 99.6 8.8E-15 3E-19 154.1 18.7 213 42-292 167-437 (448)
65 2q9o_A Laccase-1; multicopper 99.6 5.8E-14 2E-18 151.9 25.0 248 44-293 195-510 (559)
66 2g23_A PHS, phenoxazinone synt 99.6 3.6E-14 1.2E-18 153.6 23.0 235 43-293 253-580 (612)
67 2wsd_A Spore coat protein A; o 99.6 6.6E-15 2.2E-19 157.9 12.0 230 43-309 229-509 (513)
68 3abg_A Bilirubin oxidase; clea 99.5 5.8E-14 2E-18 150.7 17.2 241 43-310 200-475 (534)
69 3cvb_A Plastocyanin; cupredoxi 99.5 6.7E-15 2.3E-19 123.1 4.4 90 51-144 14-105 (105)
70 3sqr_A Laccase; multicopper ox 99.5 2.9E-12 9.8E-17 137.9 24.1 243 44-292 225-532 (580)
71 1iby_A Nitrosocyanin; RED copp 99.4 5.5E-13 1.9E-17 112.7 10.0 104 27-144 3-112 (112)
72 3gyr_A PHS, phenoxazinone synt 99.4 8.7E-12 3E-16 137.3 20.5 94 189-292 459-579 (612)
73 2cal_A Rusticyanin; iron respi 99.4 1.8E-12 6.1E-17 115.4 9.9 99 40-143 46-154 (154)
74 1fwx_A Nitrous oxide reductase 99.2 3.7E-11 1.3E-15 128.1 11.0 96 40-146 497-594 (595)
75 2aan_A Auracyanin A; cupredoxi 99.1 4.8E-11 1.6E-15 104.8 7.1 95 445-550 35-139 (139)
76 2ov0_A Amicyanin; beta-sandwic 99.1 2.1E-10 7.3E-15 95.3 9.6 79 50-143 27-105 (105)
77 3cvb_A Plastocyanin; cupredoxi 99.1 1.5E-10 5.1E-15 96.3 8.3 86 445-551 19-105 (105)
78 2gim_A Plastocyanin; beta shee 98.9 2E-09 7E-14 89.6 7.1 82 56-143 20-105 (106)
79 2aan_A Auracyanin A; cupredoxi 98.8 1.7E-08 5.9E-13 88.3 10.1 90 53-143 32-139 (139)
80 2gim_A Plastocyanin; beta shee 98.8 1.3E-08 4.3E-13 84.7 8.8 85 445-550 20-105 (106)
81 3c75_A Amicyanin; copper prote 98.8 9.6E-09 3.3E-13 88.9 8.0 79 50-143 54-132 (132)
82 4hci_A Cupredoxin 1; structura 98.7 3.8E-08 1.3E-12 80.8 9.0 79 50-143 22-100 (100)
83 1qhq_A Protein (auracyanin); e 98.7 4.6E-08 1.6E-12 85.7 9.2 98 446-550 34-139 (140)
84 1pcs_A Plastocyanin; electron 98.6 1.4E-07 4.8E-12 77.1 9.1 80 445-550 19-98 (98)
85 1qhq_A Protein (auracyanin); e 98.6 2.5E-07 8.4E-12 81.0 10.3 89 55-144 32-140 (140)
86 2plt_A Plastocyanin; electron 98.6 1.9E-07 6.3E-12 76.3 8.9 77 56-143 18-98 (98)
87 2plt_A Plastocyanin; electron 98.5 2.2E-07 7.7E-12 75.8 8.5 81 445-550 18-98 (98)
88 1bxv_A Plastocyanin; copper pr 98.5 2.5E-07 8.6E-12 74.3 8.3 73 445-550 19-91 (91)
89 1pcs_A Plastocyanin; electron 98.5 4.4E-07 1.5E-11 74.0 8.1 80 56-143 19-98 (98)
90 1b3i_A PETE protein, protein ( 98.4 3.9E-07 1.3E-11 74.2 7.6 78 446-550 20-97 (97)
91 1iby_A Nitrosocyanin; RED copp 98.4 1.2E-06 4.1E-11 73.4 9.9 75 445-551 38-112 (112)
92 1byp_A Protein (plastocyanin); 98.4 9E-07 3.1E-11 72.3 8.8 83 445-550 17-99 (99)
93 1bxv_A Plastocyanin; copper pr 98.4 6.3E-07 2.2E-11 71.9 7.8 73 56-143 19-91 (91)
94 3erx_A Pseudoazurin; copper pr 98.4 1.2E-06 4E-11 74.3 8.6 75 56-145 21-95 (123)
95 3tu6_A Pseudoazurin (blue copp 98.4 8.7E-07 3E-11 75.5 7.6 76 56-146 23-98 (127)
96 1kdj_A Plastocyanin; electron 98.3 1.1E-06 3.8E-11 72.2 7.8 74 56-143 17-102 (102)
97 1b3i_A PETE protein, protein ( 98.3 1.5E-06 5.2E-11 70.6 8.4 77 56-143 19-97 (97)
98 4hci_A Cupredoxin 1; structura 98.3 2.1E-06 7E-11 70.3 9.0 73 445-550 28-100 (100)
99 1byp_A Protein (plastocyanin); 98.3 1.5E-06 5.2E-11 70.9 8.2 77 56-143 17-99 (99)
100 1plc_A Plastocyanin; electron 98.3 1.6E-06 5.5E-11 70.8 8.1 77 56-143 17-99 (99)
101 1kdj_A Plastocyanin; electron 98.3 1.8E-06 6.3E-11 70.9 7.7 86 445-550 17-102 (102)
102 3ef4_A Pseudoazurin, blue copp 98.3 3.6E-06 1.2E-10 71.2 9.4 75 56-145 22-96 (124)
103 1cuo_A Protein (azurin ISO-2); 98.3 6.7E-06 2.3E-10 70.3 11.2 89 56-144 18-129 (129)
104 3ay2_A Lipid modified azurin p 98.2 8.4E-06 2.9E-10 72.6 10.2 93 52-144 54-167 (167)
105 1id2_A Amicyanin; beta barrel, 98.1 1.1E-05 3.9E-10 66.6 9.3 77 52-143 30-106 (106)
106 1plc_A Plastocyanin; electron 98.1 1.3E-05 4.6E-10 65.2 8.7 83 445-550 17-99 (99)
107 1paz_A Pseudoazurin precursor; 98.1 1.3E-05 4.5E-10 68.0 8.8 75 56-145 21-95 (123)
108 1iuz_A Plastocyanin; electron 98.1 1.4E-05 4.8E-10 65.0 8.6 77 56-143 18-98 (98)
109 1pmy_A Pseudoazurin; electron 98.0 1.2E-05 4.1E-10 68.2 7.7 75 56-145 21-95 (123)
110 2ccw_A Azurin II, AZN-2; elect 98.0 5.2E-05 1.8E-09 64.7 11.7 87 56-143 18-128 (129)
111 3sbq_A Nitrous-oxide reductase 98.0 1.7E-05 5.8E-10 83.0 9.8 89 46-145 548-638 (638)
112 2cal_A Rusticyanin; iron respi 97.9 6.1E-05 2.1E-09 66.6 11.0 85 445-550 61-154 (154)
113 2ov0_A Amicyanin; beta-sandwic 97.9 3.8E-05 1.3E-09 63.3 8.7 73 445-550 33-105 (105)
114 2iaa_C Azurin; quinoprotein, t 97.9 6.8E-05 2.3E-09 63.8 10.2 91 52-143 13-127 (128)
115 1fwx_A Nitrous oxide reductase 97.9 5.1E-05 1.7E-09 81.1 11.1 77 445-551 513-592 (595)
116 1nwp_A Azurin; electron transp 97.8 7.5E-05 2.6E-09 63.6 9.6 87 56-143 18-128 (128)
117 2ux6_A Pseudoazurin; type-1 co 97.8 4.3E-05 1.5E-09 64.7 7.5 73 56-145 21-93 (122)
118 3tu6_A Pseudoazurin (blue copp 97.3 0.00043 1.5E-08 58.8 7.2 76 445-553 23-98 (127)
119 3ef4_A Pseudoazurin, blue copp 97.3 0.00059 2E-08 57.5 7.9 75 445-552 22-96 (124)
120 3erx_A Pseudoazurin; copper pr 97.3 0.00072 2.5E-08 57.0 8.4 75 445-552 21-95 (123)
121 1id2_A Amicyanin; beta barrel, 97.1 0.0018 6.1E-08 53.2 8.8 73 445-550 34-106 (106)
122 1iuz_A Plastocyanin; electron 97.1 0.0022 7.5E-08 51.7 9.1 81 445-550 18-98 (98)
123 3fsa_A Azurin; copper, cupredo 97.1 0.0036 1.2E-07 52.4 9.8 86 53-143 15-125 (125)
124 3c75_A Amicyanin; copper prote 97.0 0.0027 9.2E-08 54.3 8.7 73 445-550 60-132 (132)
125 1paz_A Pseudoazurin precursor; 96.7 0.0061 2.1E-07 51.4 8.5 75 445-552 21-95 (123)
126 1pmy_A Pseudoazurin; electron 96.6 0.0066 2.3E-07 51.1 7.8 38 511-552 58-95 (123)
127 3sbq_A Nitrous-oxide reductase 96.4 0.017 5.9E-07 60.6 11.1 79 445-551 558-637 (638)
128 2cua_A Protein (CUA); CUA cent 96.3 0.017 5.8E-07 49.4 9.2 74 56-144 60-135 (135)
129 3ay2_A Lipid modified azurin p 96.1 0.017 5.7E-07 51.2 8.1 95 446-550 59-166 (167)
130 3s8f_B Cytochrome C oxidase su 95.8 0.044 1.5E-06 48.5 9.5 73 56-143 93-167 (168)
131 1cuo_A Protein (azurin ISO-2); 95.5 0.079 2.7E-06 44.8 9.7 96 445-550 18-128 (129)
132 2ux6_A Pseudoazurin; type-1 co 95.5 0.05 1.7E-06 45.6 8.2 73 445-552 21-93 (122)
133 2cua_A Protein (CUA); CUA cent 95.3 0.088 3E-06 44.9 9.3 70 447-550 62-134 (135)
134 2ccw_A Azurin II, AZN-2; elect 94.7 0.16 5.5E-06 42.9 9.2 43 507-550 83-128 (129)
135 1nwp_A Azurin; electron transp 94.5 0.16 5.6E-06 42.8 8.7 96 445-550 18-128 (128)
136 2iaa_C Azurin; quinoprotein, t 94.0 0.2 6.9E-06 42.2 8.2 43 507-550 82-127 (128)
137 3s8f_B Cytochrome C oxidase su 92.4 0.74 2.5E-05 40.6 9.6 72 447-550 95-167 (168)
138 3isy_A Bsupi, intracellular pr 91.2 1.5 5E-05 36.2 9.5 74 217-291 16-104 (120)
139 3fsa_A Azurin; copper, cupredo 90.7 0.79 2.7E-05 38.1 7.5 93 445-550 18-125 (125)
140 3isy_A Bsupi, intracellular pr 82.5 12 0.00041 30.7 10.1 62 56-128 34-100 (120)
141 1cyx_A CYOA; electron transpor 79.9 5.9 0.0002 35.9 8.0 63 211-292 41-103 (205)
142 2wtp_A ORF131 protein, CZCE; m 71.1 0.51 1.7E-05 39.2 -1.3 17 57-73 72-88 (131)
143 2x3c_A Toxic extracellular end 69.2 8.6 0.0003 38.0 6.9 16 102-117 95-110 (343)
144 2gsm_B Cytochrome C oxidase su 64.9 14 0.00049 34.8 7.2 62 211-291 171-232 (262)
145 3hb3_B Cytochrome C oxidase su 64.4 18 0.0006 34.9 7.8 63 211-292 189-251 (298)
146 1cyx_A CYOA; electron transpor 61.6 16 0.00053 33.1 6.4 73 56-143 41-115 (205)
147 2r39_A FIXG-related protein; s 54.2 40 0.0014 27.3 7.3 47 219-275 33-81 (118)
148 1v54_B Cytochrome C oxidase po 50.5 32 0.0011 31.7 6.7 62 211-291 140-201 (227)
149 2gsm_B Cytochrome C oxidase su 46.3 56 0.0019 30.7 7.9 75 56-145 171-247 (262)
150 1fft_B Ubiquinol oxidase; elec 41.4 26 0.0009 34.0 4.8 62 211-291 151-212 (315)
151 1yew_A Particulate methane mon 38.7 65 0.0022 31.5 6.9 104 2-120 201-337 (382)
152 1xwv_A DER F II; beta sheets, 38.4 63 0.0022 26.6 6.1 69 47-116 16-92 (129)
153 1nep_A EPV20, BNPC2, epididyma 37.4 60 0.002 26.8 5.9 70 47-117 18-95 (130)
154 3q48_A Chaperone CUPB2; IG fol 36.9 44 0.0015 31.3 5.5 44 27-72 45-101 (257)
155 3hb3_B Cytochrome C oxidase su 35.2 1.2E+02 0.0039 29.2 8.2 76 445-552 189-265 (298)
156 2f1e_A Protein APAG; APAG prot 34.0 55 0.0019 27.1 4.9 49 67-116 34-88 (127)
157 1xvs_A Protein APAG; MCSG APC2 32.3 51 0.0017 27.2 4.5 49 67-116 33-87 (126)
158 1jer_A Cucumber stellacyanin; 31.2 68 0.0023 26.9 5.2 34 520-553 76-110 (138)
159 2wtp_A ORF131 protein, CZCE; m 29.1 18 0.00061 30.0 1.1 19 212-230 72-90 (131)
160 2f1e_A Protein APAG; APAG prot 29.0 55 0.0019 27.0 4.1 49 220-271 32-84 (127)
161 1xvs_A Protein APAG; MCSG APC2 28.5 49 0.0017 27.3 3.7 50 220-272 31-84 (126)
162 1xq4_A Protein APAG; all beta 27.9 72 0.0025 26.8 4.7 49 67-116 38-92 (139)
163 3e8v_A Possible transglutamina 27.9 1.9E+02 0.0065 21.7 6.5 45 242-286 4-48 (82)
164 1tza_A APAG protein, SOR45; st 26.7 53 0.0018 27.4 3.6 50 220-272 31-84 (134)
165 2x3c_A Toxic extracellular end 25.6 1.7E+02 0.0059 28.6 7.8 68 219-288 38-127 (343)
166 3kmh_A D-lyxose isomerase; cup 25.1 1.2E+02 0.0042 27.8 6.0 18 259-282 172-189 (246)
167 1iz6_A Initiation factor 5A; S 24.8 1.7E+02 0.0057 24.4 6.5 50 187-245 14-68 (138)
168 2a3m_A COG3005: nitrate/TMAO r 24.8 16 0.00055 30.4 0.1 8 1-8 1-8 (130)
169 2xzz_A Protein-glutamine gamma 24.6 1E+02 0.0035 24.2 4.9 50 65-122 23-78 (102)
170 2c34_A ICP, inhibitor of cyste 24.2 2.7E+02 0.0093 22.2 7.5 63 55-122 14-88 (116)
171 3er0_A Eukaryotic translation 23.8 1.5E+02 0.0053 25.6 6.2 50 187-245 38-92 (167)
172 1v54_B Cytochrome C oxidase po 23.6 1.9E+02 0.0064 26.4 7.1 75 445-551 140-215 (227)
173 2p9r_A Alpha-2-M, alpha-2-macr 23.5 2.4E+02 0.0082 21.5 7.0 69 214-288 12-84 (102)
174 3idu_A Uncharacterized protein 23.1 3.1E+02 0.011 22.4 9.5 67 214-289 28-97 (127)
175 1xq4_A Protein APAG; all beta 22.9 58 0.002 27.3 3.2 49 220-271 36-88 (139)
176 3rfr_A PMOB; membrane, oxidore 22.9 1.3E+02 0.0043 29.9 5.9 53 65-120 301-369 (419)
177 1x9u_A Umecyanin; cupredoxin, 22.3 97 0.0033 25.0 4.4 33 520-552 73-106 (116)
178 4ac7_B Urease subunit beta; hy 21.5 81 0.0028 25.7 3.6 67 49-115 4-88 (126)
179 4ubp_B Protein (urease (chain 21.5 81 0.0028 25.7 3.6 67 49-115 4-88 (126)
180 2hj1_A Hypothetical protein; s 20.5 34 0.0011 26.8 1.2 24 45-68 59-82 (97)
181 3lag_A Uncharacterized protein 20.1 2.4E+02 0.0082 21.5 6.3 56 454-517 19-77 (98)
182 1bkb_A Translation initiation 20.0 2E+02 0.0069 23.8 6.0 50 187-245 16-70 (136)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=4.9e-100 Score=827.52 Aligned_cols=512 Identities=29% Similarity=0.558 Sum_probs=407.5
Q ss_pred cceEEEEEEEEEEEeccCceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CceeEeeecccccCCCCCCCCCCccc
Q 008351 23 AAIVEHSFHVKNLTIGRLCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESP-YNITIHWHGIFQLLSPWADGPNMITQ 101 (569)
Q Consensus 23 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~tq 101 (569)
+++|+|+|+|++..+++||.++.+|+|||++|||+|++++||+|+|+|+|.|+ ++++|||||+++.+++||||+|++||
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 47899999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred ccCCCCCeeEEEEEeCCCCcceeEecchhhhhc-cceeeEEEeCCCCCCCCCCCCCCceeEEeeeeeccCHHHHHHHHHh
Q 008351 102 CPITPGRSYTYKFNVINQEGTLWWHGHVSLLRA-TVYGALIIRPKSGHEYPYPKPDKEVPILLGEWWNANVVDVENQAQI 180 (569)
Q Consensus 102 ~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~ 180 (569)
|+|+||++|+|+|++ +++||||||||...+.. ||+|+|||++++....++ .+|+|++|+|+||++....++......
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999999 99999999999988876 999999999986554454 357899999999999887666543322
Q ss_pred cC-CCCCCCceEEEcCcCCCCCCCCCCC----------------CcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCcee
Q 008351 181 TG-GAPNISDAYTINGKPGDLYPCSQNP----------------NQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKF 243 (569)
Q Consensus 181 ~g-~~~~~~~~~liNG~~~~~~~~~~~~----------------~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 243 (569)
.. .....++.++|||+. .++|+..+ ...+.++|++|++|||||||+|..+.+.|+|+||+|
T Consensus 159 ~~~~~~~~~~~~liNG~~--~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRG--QFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp SSCCCCCSCSEEEETTBC--CSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred ccccCCCCCCeEEECCcc--ccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 11 111346899999994 34443210 112479999999999999999999999999999999
Q ss_pred EEEEecCCCCCceEeeEEEEcCCcEEEEEEEe-CCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCC--CCCCC
Q 008351 244 TVVSVDASYTDPYVTDVVVIAPGQTTDVLLKA-DQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAASSA--NPLMP 320 (569)
Q Consensus 244 ~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~-~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~--~~~~p 320 (569)
+|||+||.+++|+.++++.|+|||||||+|++ ++.+|+|||+++... +. .+.....|+|+|.+..... ....|
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~-~~---~~~~~~~ail~y~~~~~~~~p~~~~p 312 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRA-RH---PNTPPGLTLLNYLPNSVSKLPTSPPP 312 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEES-SC---CCSCCEEEEEEETTSCTTSCCSSCCC
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEccc-CC---CCCccEEEEEEECCCCCCCCCCCCCC
Confidence 99999999999999999999999999999999 456899999999865 21 1334678999998865311 11223
Q ss_pred CCCCCCCCccccccccccCCCCCCCCCCCCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchh
Q 008351 321 ALPAFNDTPTAHKFYSNLTGLTDGPHWVPVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSL 400 (569)
Q Consensus 321 ~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~ 400 (569)
..|.+++......+ .++.+.... +...+..+++++.+.+..+.. ...+.|++||.+|..|. .|+
T Consensus 313 ~~p~~~~~~~~~~~--~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~------------~~~~~w~iNg~s~~~p~-~P~ 376 (552)
T 1aoz_A 313 QTPAWDDFDRSKNF--TYRITAAMG-SPKPPVKFNRRIFLLNTQNVI------------NGYVKWAINDVSLALPP-TPY 376 (552)
T ss_dssp CCCCTTCHHHHHHH--HTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE------------TTEEEEEETTEEECCCS-SCH
T ss_pred CCCccccccccccc--cccccccCC-CCCCCCCCcEEEEEEEeeccC------------CCeEEEEECCCccCCCC-CCH
Confidence 34433332221111 123332221 233456678888877654321 22568999999999886 788
Q ss_pred hhhhhcccCCccCCCCCCCCC-CCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCC---CCCCCeeeec
Q 008351 401 LQAFFFNVGGIYTPNFPNNPP-LKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIA---VENHPIHIHG 476 (569)
Q Consensus 401 ~~~~~~~~~g~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~---~~~HP~HlHG 476 (569)
|.+++.+.+|.+..+++..++ ..|+.... ..+...+.++.++.++.|++|||+|+|.+.+. .+.|||||||
T Consensus 377 L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~-----~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HLHG 451 (552)
T 1aoz_A 377 LGAMKYNLLHAFDQNPPPEVFPEDYDIDTP-----PTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHG 451 (552)
T ss_dssp HHHHHTTCTTSSCCSCCCSCCCTTCCTTSC-----CCCTTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEETT
T ss_pred HHHHhhcCccccccCCCccccccccccccc-----cccccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEEcC
Confidence 888877777777666654332 12333221 11112345667889999999999999976432 4679999999
Q ss_pred CcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeCCceeEEEeeccccccccccEEEEEEecCCCCC
Q 008351 477 FDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVENGPTPA 556 (569)
Q Consensus 477 ~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~ 556 (569)
|+|+||++|.|.|++ .+...+|+.+|+|||||.||++||++|||++||||.|+|||||++|++.|||++|.|+..
T Consensus 452 h~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~---- 526 (552)
T 1aoz_A 452 HDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE---- 526 (552)
T ss_dssp CCEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG----
T ss_pred CceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch----
Confidence 999999999999987 456788999999999999999999999999999999999999999999999999998642
Q ss_pred CCCCCCCCCCCCC
Q 008351 557 TRLPPPPADLPQC 569 (569)
Q Consensus 557 ~~~~~~p~~~~~c 569 (569)
+++++|.++++|
T Consensus 527 -~~~~~P~~~~~C 538 (552)
T 1aoz_A 527 -KVGRIPTKALAC 538 (552)
T ss_dssp -GCCCCCHHHHSS
T ss_pred -hhccCCcchhhh
Confidence 567789999999
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=2.4e-97 Score=798.79 Aligned_cols=467 Identities=32% Similarity=0.512 Sum_probs=375.0
Q ss_pred ccceEEEEEEEEEEEeccCceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CceeEeeecccccCCCCCCCCCCcc
Q 008351 22 SAAIVEHSFHVKNLTIGRLCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESP-YNITIHWHGIFQLLSPWADGPNMIT 100 (569)
Q Consensus 22 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~t 100 (569)
.+++|+|+|+|++..+++||+++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||+++.+++||||+|++|
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 377899999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred cccCCCCCeeEEEEEeCCCCcceeEecchhhhhc-cceeeEEEeCCCCCCCCCCCCCCce-eEEeeeeeccCHHHHHHHH
Q 008351 101 QCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRA-TVYGALIIRPKSGHEYPYPKPDKEV-PILLGEWWNANVVDVENQA 178 (569)
Q Consensus 101 q~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~d~e~-~l~l~d~~~~~~~~~~~~~ 178 (569)
||+|+||++|+|+|++ .++||||||||...++. ||+|+|||+++... .+|.|. +|+|+||++....++....
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccC-----CCCccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999999 79999999999988887 99999999987643 467787 9999999999988776655
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCCC-------CCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCC
Q 008351 179 QITGGAPNISDAYTINGKPGDLYPCSQN-------PNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDAS 251 (569)
Q Consensus 179 ~~~g~~~~~~~~~liNG~~~~~~~~~~~-------~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 251 (569)
...+ ...++.++|||+ + .++|+.. ....+.++|++|++|||||||+|....+.|+|+||+|+|||+||.
T Consensus 218 ~~~~--~~~~d~~liNG~-~-~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLGA--PPALENTLMNGT-N-TFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTSC--CCCBSEEEETTB-C-CCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hccC--CCCCceEEECCc-c-cCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 4322 457899999999 3 3555421 134689999999999999999999999999999999999999999
Q ss_pred CCCceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccc
Q 008351 252 YTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTA 331 (569)
Q Consensus 252 ~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~ 331 (569)
+++|+.+++|.|+|||||||+|++++.+|+|||++.....|.. ........|||+|.++.... |..+.+......
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~-~~~~~~~~aiL~Y~~~~~~~----P~~~~~~~~~~~ 368 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCST-NNEAANATGILRYDSSSIAN----PTSVGTTPRGTC 368 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSC-BTTGGGCEEEEESSTTCCCC----CCCCCCCCCCCS
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCc-cCCCCceEEEEEECCCCCCC----CCCCCCCccchh
Confidence 9999999999999999999999999888999999988765531 12334679999998754322 322222221111
Q ss_pred -cccccccCCCCCCCCCCCCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCC
Q 008351 332 -HKFYSNLTGLTDGPHWVPVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGG 410 (569)
Q Consensus 332 -~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g 410 (569)
.....+|.++. +..++...+.++.+.++ .+..+.|++||.+|..+...|.|...+.+.
T Consensus 369 ~~~~~~~L~P~~----~~~~~~~~~~~~~l~~~---------------~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~-- 427 (580)
T 3sqr_A 369 EDEPVASLVPHL----ALDVGGYSLVDEQVSSA---------------FTNYFTWTINSSSLLLDWSSPTTLKIFNNE-- 427 (580)
T ss_dssp CCSCGGGCCBSS----CCBCCSEEEEEEEEEEE---------------ESSSEEEEETTBCCCCCTTSCHHHHHHTTC--
T ss_pred hcccccccccCC----CCCCCCccceEEEEEec---------------cCCceeEEECCEecccCCCCCchhhhhcCC--
Confidence 11112333322 22233333444433332 234678999999997643356554443221
Q ss_pred ccCCCCCCCCCCCccCCCCCCCCCccccCCCCcceEEEc----cCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCc
Q 008351 411 IYTPNFPNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTL----KFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGF 486 (569)
Q Consensus 411 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~ 486 (569)
.+|+. ...++.+ +.|++|||+|+|.+. ..+.||||||||+|+||++|.
T Consensus 428 ---~~~~~------------------------~~~~~~~~~~~~~~~~VeiVi~n~~~-~~~~HP~HLHGh~F~vv~~g~ 479 (580)
T 3sqr_A 428 ---TIFPT------------------------EYNVVALEQTNANEEWVVYVIEDLTG-FGIWHPIHLHGHDFFIVAQET 479 (580)
T ss_dssp ---CCCCG------------------------GGCEEEECC----CCEEEEEEEECSS-SCCCEEEEESSCCEEEEEEES
T ss_pred ---ccCCC------------------------CcceeecccccCCCcEEEEEEeCCCc-cccceeeEecCceEEEEecCC
Confidence 12221 1233444 469999999999762 237999999999999999999
Q ss_pred CcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeCCceeEEEeeccccccccccEEEEEEecC
Q 008351 487 GNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVENG 552 (569)
Q Consensus 487 g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 552 (569)
|.|+++.+...+|+.||++||||.|+++||++|||++||||+|+|||||++|++.||+++|.+++.
T Consensus 480 G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~~ 545 (580)
T 3sqr_A 480 DVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQS 545 (580)
T ss_dssp SCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESGG
T ss_pred CccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECHH
Confidence 999987777889999999999999999999999999999999999999999999999999998643
No 3
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.3e-94 Score=778.21 Aligned_cols=481 Identities=28% Similarity=0.459 Sum_probs=363.6
Q ss_pred cccccceEEEEEEEEEEEeccCce-eeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-----CceeEeeecccccCCCC
Q 008351 19 TLASAAIVEHSFHVKNLTIGRLCR-QRVITAVNGRLPGPTIRVHEGDTLVVHVFNESP-----YNITIHWHGIFQLLSPW 92 (569)
Q Consensus 19 ~~~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~-----~~~~iH~HG~~~~~~~~ 92 (569)
.+..+...+|+|++++..+++||+ ++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||+++.+.+|
T Consensus 17 ~~~~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~ 96 (521)
T 1v10_A 17 SLSLAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTE 96 (521)
T ss_dssp -----CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGG
T ss_pred hhhcccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCc
Confidence 445677788999999999999999 999999999999999999999999999999999 99999999999998899
Q ss_pred CCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecchhhhhc-cceeeEEEeCCCCC-CCCCCCCCCceeEEeeeeeccC
Q 008351 93 ADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRA-TVYGALIIRPKSGH-EYPYPKPDKEVPILLGEWWNAN 170 (569)
Q Consensus 93 ~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~ 170 (569)
+||+|+++||+|+||++|+|+|++++++||||||||.+.+.. ||+|+|||+++.+. +.++...++|++|+|+||+++.
T Consensus 97 ~DGv~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~ 176 (521)
T 1v10_A 97 MDGPAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSL 176 (521)
T ss_dssp GSCCBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSC
T ss_pred cCCCcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCC
Confidence 999999999999999999999997689999999999998876 99999999987532 2223223469999999999987
Q ss_pred HHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecC
Q 008351 171 VVDVENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDA 250 (569)
Q Consensus 171 ~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG 250 (569)
..++... .+.....++.++|||+. .+.|.......+.++|++|++|||||||+|..+.+.|+|+||+|+||++||
T Consensus 177 ~~~~~~~---~~~~~~~~d~~liNG~~--~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG 251 (521)
T 1v10_A 177 STVLFPN---PNKAPPAPDTTLINGLG--RNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDG 251 (521)
T ss_dssp CC----------CCCSCCSEEEETTBC--CCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETT
T ss_pred HHHHhhc---cCCCCCCCCEEEECCcc--cCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCC
Confidence 7655321 12223468899999994 245652113458999999999999999999999999999999999999999
Q ss_pred CCCCceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcc
Q 008351 251 SYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPT 330 (569)
Q Consensus 251 ~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~ 330 (569)
.+++|+.++++.|+|||||||+|++++.+|+|+|+++....+. .+......++|+|.+.....+ ..+.. ....
T Consensus 252 ~~~~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~--~~~~~~~~ail~y~~~~~~~p----~~~~~-~~~~ 324 (521)
T 1v10_A 252 VSHQPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRN--GFTGGINSAIFRYQGAAVAEP----TTSQN-SGTA 324 (521)
T ss_dssp EEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC--SCGGGTTEEEEEETTCCSCCC----CCCCC-CSCB
T ss_pred ccccceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccc--cCCCCceeEEEEECCCCCCCC----CCCCC-cccc
Confidence 9999999999999999999999999977899999998764322 122223469999988654322 11111 0000
Q ss_pred ccccccccCCCCCCCCCC-CCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcccC
Q 008351 331 AHKFYSNLTGLTDGPHWV-PVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVG 409 (569)
Q Consensus 331 ~~~~~~~l~~l~~~~~~~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~ 409 (569)
. ...++.++.....+. ..+...+.++.+.+.+ ++..+.|.|||++|..++ .|++...+.+..
T Consensus 325 ~--~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~~~~~~~~iNg~~~~~~~-~P~l~~~~~g~~ 387 (521)
T 1v10_A 325 L--NEANLIPLINPGAPGNPVPGGADINLNLRIGR--------------NATTADFTINGAPFIPPT-VPVLLQILSGVT 387 (521)
T ss_dssp C--CGGGCCBSSCCCCSSCSSTTCSSEEEECCEEC--------------CSSSSCCEESSCCCCCCS-SCHHHHHHHTCC
T ss_pred c--chhhcccCCcccCCCcccCCcceEEEEEEEec--------------CCceeEEEECCCcccCCC-CchhhhhhcCCc
Confidence 0 012333332221111 1112345444333221 223357999999998887 455444332210
Q ss_pred CccCCCCCCCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcC
Q 008351 410 GIYTPNFPNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNY 489 (569)
Q Consensus 410 g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~ 489 (569)
. ..+ ...++.++.++.|++|||+++| . +.||||||||+|+||+++.+
T Consensus 388 ~--~~~------------------------~~~~~~~~~v~~g~~vei~l~N-~----~~HP~HLHGh~F~Vl~~~~~-- 434 (521)
T 1v10_A 388 N--PND------------------------LLPGGAVISLPANQVIEISIPG-G----GNHPFHLHGHNFDVVRTPGS-- 434 (521)
T ss_dssp C--GGG------------------------SSSTTTEEEECTTCEEEEEEEC-C----BSCEEEESSCCEEEEECTTC--
T ss_pred c--ccc------------------------CCCCceEEEecCCCEEEEEEcC-C----CCCCEEEccceEEEEecCCC--
Confidence 0 000 1223467889999999999999 2 79999999999999999754
Q ss_pred CcccccccccCCCCCccceEEe-CCCcEEEEEEEeCCceeEEEeeccccccccccEEEEEEecCCCCCCCCCCCC-CCCC
Q 008351 490 NAARDIKKFNLVNPQRRNTIAV-PVGGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVENGPTPATRLPPPP-ADLP 567 (569)
Q Consensus 490 ~~~~~~~~~~~~~p~~rDTv~v-p~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p-~~~~ 567 (569)
..+|+.+|.|||||.| |+++|++|||++||||.|+|||||++|++.|||++|.|.+.+ .+++.++| ...+
T Consensus 435 ------~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~ 506 (521)
T 1v10_A 435 ------SVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPN--IPIANAISPAWDD 506 (521)
T ss_dssp ------SCCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGG--HHHHSCCCHHHHT
T ss_pred ------CccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcc--hhhccCCChHHhh
Confidence 2467889999999999 899999999999999999999999999999999999986543 23344444 4566
Q ss_pred CC
Q 008351 568 QC 569 (569)
Q Consensus 568 ~c 569 (569)
.|
T Consensus 507 ~C 508 (521)
T 1v10_A 507 LC 508 (521)
T ss_dssp HH
T ss_pred hc
Confidence 66
No 4
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=8.3e-94 Score=763.15 Aligned_cols=458 Identities=30% Similarity=0.492 Sum_probs=358.2
Q ss_pred eEEEEEEEEEEEeccCceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCC-----ceeEeeecccccCCCCCCCCCCc
Q 008351 25 IVEHSFHVKNLTIGRLCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPY-----NITIHWHGIFQLLSPWADGPNMI 99 (569)
Q Consensus 25 ~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~~ 99 (569)
-..|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||+++..++||||++++
T Consensus 3 ~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred cceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 3579999999999999999999999999999999999999999999999984 79999999999999999999999
Q ss_pred ccccCCCCCeeEEEEEeCCCCcceeEecchhhhhc-cceeeEEEeCCCCCC-CCCCCCCCceeEEeeeeeccCHHHHHHH
Q 008351 100 TQCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRA-TVYGALIIRPKSGHE-YPYPKPDKEVPILLGEWWNANVVDVENQ 177 (569)
Q Consensus 100 tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~-~~~~~~d~e~~l~l~d~~~~~~~~~~~~ 177 (569)
|||+|+||++|+|+|++++++||||||||...+.. ||+|+|||+++.+.. ..+...+.|++|+++||+++....
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT----
T ss_pred ccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc----
Confidence 99999999999999999789999999999988876 999999999875421 122222457899999999876432
Q ss_pred HHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCCceE
Q 008351 178 AQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTDPYV 257 (569)
Q Consensus 178 ~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~ 257 (569)
.+..+..++++||||+ ++++.|.. ...+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.
T Consensus 159 ---~~~~p~~~d~~liNG~-~~~~~~~~--~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~ 232 (499)
T 3pxl_A 159 ---GPRFPGGADATLINGK-GRAPSDSV--AELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLE 232 (499)
T ss_dssp ---SCSSCSSCSEEEETTB-CCCTTCTT--CCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEE
T ss_pred ---ccCCCCCCcEEEECCC-CcCCCCCC--CCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceE
Confidence 2333447899999999 54443332 35689999999999999999999999999999999999999999999999
Q ss_pred eeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccc
Q 008351 258 TDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSN 337 (569)
Q Consensus 258 ~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 337 (569)
+++|.|+|||||||+|++++.+|+|||++.....+. .+......|+|+|.++....+ ..+...... .....+
T Consensus 233 ~~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~--~~~~~~~~ail~Y~~~~~~~p----~~~~~~~~~--~~~~~~ 304 (499)
T 3pxl_A 233 VDSIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNV--GFDGGINSAILRYDGAPAVEP----TTNQTTSVK--PLNEVD 304 (499)
T ss_dssp ESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC--SCGGGTTEEEEEETTSCSSCC----CCCCCCCSS--BCCGGG
T ss_pred eeeEEECCCcEEEEEEECCCCCceEEEEEecccCcc--ccCCCceEEEEEeCCCCCCCC----CCCCCCCCc--cccccc
Confidence 999999999999999999987899999998754433 222334579999987643222 111111111 111234
Q ss_pred cCCCCCCCCCC-CCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCCC
Q 008351 338 LTGLTDGPHWV-PVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNF 416 (569)
Q Consensus 338 l~~l~~~~~~~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 416 (569)
|.++.....+. ..+..+|+++.+.+.+. + ..|+|||++|..|+ .|+|...+.+ ....
T Consensus 305 L~p~~~~~~p~~~~~~~~d~~~~l~~~~~--------------~--~~w~iNg~s~~~~~-~P~L~~~~~g---~~~~-- 362 (499)
T 3pxl_A 305 LHPLVSTPVPGAPSSGGVDKAINMAFNFN--------------G--SNFFINGASFVPPT-VPVLLQILSG---AQTA-- 362 (499)
T ss_dssp CCBSSCCCCSSCSSTTCSSEEEECCEEEC--------------S--SCEEETTBCCCCCS-SCHHHHHHTT---CCST--
T ss_pred ccccccccCCCcccCCCCcEEEEEEEEec--------------C--cEEEEcCEecCCCC-CchhhhhhcC---Cccc--
Confidence 55543322221 12345777776655431 2 26899999998876 5544333322 1100
Q ss_pred CCCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccc
Q 008351 417 PNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIK 496 (569)
Q Consensus 417 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~ 496 (569)
.. ......++.++.|++|||+|+|.+....+.||||||||+|+||+.+. ..
T Consensus 363 ----~~-----------------~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~g--------~~ 413 (499)
T 3pxl_A 363 ----QD-----------------LLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSAG--------ST 413 (499)
T ss_dssp ----TT-----------------SSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECTT--------CC
T ss_pred ----cc-----------------cCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEeccC--------Cc
Confidence 00 11223678999999999999953323458999999999999998642 34
Q ss_pred cccCCCCCccceEEeCC---CcEEEEEEEeCCceeEEEeeccccccccccEEEEEEec
Q 008351 497 KFNLVNPQRRNTIAVPV---GGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVEN 551 (569)
Q Consensus 497 ~~~~~~p~~rDTv~vp~---~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 551 (569)
.+|+.+|+|||||.||+ ++|++|||++||||.|+|||||++|++.||+++|.+.+
T Consensus 414 ~~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (499)
T 3pxl_A 414 VYNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAEDT 471 (499)
T ss_dssp CCCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEESG
T ss_pred ccccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEECh
Confidence 67889999999999997 99999999999999999999999999999999997653
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=7.9e-93 Score=755.80 Aligned_cols=458 Identities=29% Similarity=0.485 Sum_probs=356.2
Q ss_pred EEEEEEEEEEEeccCceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCC-----ceeEeeecccccCCCCCCCCCCcc
Q 008351 26 VEHSFHVKNLTIGRLCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPY-----NITIHWHGIFQLLSPWADGPNMIT 100 (569)
Q Consensus 26 ~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~~t 100 (569)
..|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|+|++ +++|||||+++..++||||++++|
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 579999999999999999999999999999999999999999999999985 799999999999999999999999
Q ss_pred cccCCCCCeeEEEEEeCCCCcceeEecchhhhhc-cceeeEEEeCCCCCC-CCCCCCCCceeEEeeeeeccCHHHHHHHH
Q 008351 101 QCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRA-TVYGALIIRPKSGHE-YPYPKPDKEVPILLGEWWNANVVDVENQA 178 (569)
Q Consensus 101 q~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~-~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 178 (569)
||+|+||++|+|+|++++++||||||||...+.. ||+|+|||+++.+.. .++...+.|++|+++||+++....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999999789999999999988875 999999999875421 1222224578999999999875432
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCCceEe
Q 008351 179 QITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTDPYVT 258 (569)
Q Consensus 179 ~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~ 258 (569)
.+..+..++++||||+ ++++ |.......+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||.+++|+.+
T Consensus 161 --~~~~p~~~d~~liNG~-g~~~-~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~ 236 (495)
T 3t6v_A 161 --GAGGAITADSTLIDGL-GRTH-VNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTV 236 (495)
T ss_dssp --CSSSCCCCSEEEETTB-CCBS-SSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred --ccCCCCCCcEEEECCc-CcCC-CCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEe
Confidence 2333457899999999 5433 33211356899999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccccccc
Q 008351 259 DVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSNL 338 (569)
Q Consensus 259 d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l 338 (569)
++|.|+|||||||+|++++.+|+|||++.....+. .+.+....|+|+|.++....+...+ +.. ... .....+|
T Consensus 237 ~~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~--~~~~~~~~ail~Y~~~~~~~p~~~~--~~~-~~~--~~~~~~L 309 (495)
T 3t6v_A 237 DEIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGE--GFDGGINSAILRYDGATTADPVTVA--STV-HTK--CLIETDL 309 (495)
T ss_dssp SBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC--SCGGGTTEEEEEETTSCSSCCCCCC--CSS-CSS--BCCGGGC
T ss_pred eeEEEcCceEEEEEEECCCCCceEEEEEecccCcc--ccCCCceEEEEEECCCCCCCCCCCC--CCC-Ccc--ccccccc
Confidence 99999999999999999987899999998754433 2223335799999876432221100 000 000 1112244
Q ss_pred CCCCCCCCCC-CCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCCCC
Q 008351 339 TGLTDGPHWV-PVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNFP 417 (569)
Q Consensus 339 ~~l~~~~~~~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~~ 417 (569)
.++.....+. ..+..+|+++.+.+.+. + ..|+|||++|..++ .|+|...+. |....
T Consensus 310 ~p~~~~~~p~~~~~~~~d~~~~l~~~~~--------------~--~~w~iNg~s~~~~~-~P~L~~~~~---g~~~~--- 366 (495)
T 3t6v_A 310 HPLSRNGVPGNPHQGGADCNLNLSLGFA--------------C--GNFVINGVSFTPPT-VPVLLQICS---GANTA--- 366 (495)
T ss_dssp CBSSCCCCSSCSSTTCSSEEEECCEEEE--------------T--TEEEETTBCCCCCS-SCHHHHHHT---TCCSS---
T ss_pred cccccccCCCccCCCCCcEEEEEEEEec--------------C--cEEEEcCEecCCCC-Ccchhhhhc---CCcCc---
Confidence 4443222221 12345677766555431 1 17899999998876 554433332 21100
Q ss_pred CCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCccccccc
Q 008351 418 NNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKK 497 (569)
Q Consensus 418 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~ 497 (569)
.. ......++.++.|++|||+|+|. ...+.||||||||+|+||+.+. ...
T Consensus 367 ---~~-----------------~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HLHGh~F~vl~~~g--------~~~ 416 (495)
T 3t6v_A 367 ---AD-----------------LLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVSESAS--------NST 416 (495)
T ss_dssp ---TT-----------------SSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEETTCCEEEEECTT--------CCC
T ss_pred ---cc-----------------ccCCcceEEecCCCEEEEEEccC--CCCCCcceeecCCcEEEEecCC--------CCC
Confidence 00 11223678999999999999842 2348999999999999998642 346
Q ss_pred ccCCCCCccceEEeCC-CcEEEEEEEeCCceeEEEeeccccccccccEEEEEEec
Q 008351 498 FNLVNPQRRNTIAVPV-GGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVEN 551 (569)
Q Consensus 498 ~~~~~p~~rDTv~vp~-~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 551 (569)
+|+.+|+|||||.|++ |+|++|||++||||.|+|||||++|++.||+++|.+++
T Consensus 417 ~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~~ 471 (495)
T 3t6v_A 417 SNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAEDI 471 (495)
T ss_dssp CCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEETH
T ss_pred cccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECh
Confidence 7889999999999997 89999999999999999999999999999999997653
No 6
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-93 Score=770.42 Aligned_cols=462 Identities=28% Similarity=0.407 Sum_probs=362.2
Q ss_pred ceEEEEEEEEEEEeccCc-eeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CceeEeeecccccCCCCCCCCCCccc
Q 008351 24 AIVEHSFHVKNLTIGRLC-RQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESP-YNITIHWHGIFQLLSPWADGPNMITQ 101 (569)
Q Consensus 24 ~~~~~~l~~~~~~~~~~g-~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~tq 101 (569)
++|+|+|+|++..+++|| +++.+|+|||++|||+|++++||+|+|+|+|+|+ ++++|||||+++..++||||+|++||
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 579999999999999999 8999999999999999999999999999999998 99999999999999999999999999
Q ss_pred ccCCCCCeeEEEEEeCCCCcceeEecchhhhhc-cceeeEEEeCCCCCCCCCCCCCCceeEEeeeeeccCHHHHHHHHHh
Q 008351 102 CPITPGRSYTYKFNVINQEGTLWWHGHVSLLRA-TVYGALIIRPKSGHEYPYPKPDKEVPILLGEWWNANVVDVENQAQI 180 (569)
Q Consensus 102 ~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~ 180 (569)
|+|+||++|+|+|++++++||||||||.+.+.. ||+|+|||+++++ |+ .+|+|++|+|+||+++...++......
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 999999999999999559999999999998876 9999999999863 22 568899999999999998877654432
Q ss_pred c---CCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCCceE
Q 008351 181 T---GGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTDPYV 257 (569)
Q Consensus 181 ~---g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~ 257 (569)
. .+....++.+||||+. .+.++|++|++|||||||+|..+.+.|+|+||+|+|||+||++++|+.
T Consensus 157 ~~~~~g~~~~~d~~liNG~~------------~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~ 224 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTM------------NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNV 224 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBS------------SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEE
T ss_pred cccCCCCCCCCceEEECCCC------------ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccE
Confidence 1 1233468999999993 378999999999999999999999999999999999999999999999
Q ss_pred eeEEEEcCCcEEEEEEEeCCC-CceeEEEeeecccCCC--CCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccc
Q 008351 258 TDVVVIAPGQTTDVLLKADQP-VGSYYMAARAYASAPQ--IPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKF 334 (569)
Q Consensus 258 ~d~v~l~pgeR~dv~v~~~~~-~G~y~l~~~~~~~~~~--~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~ 334 (569)
+++|.|+|||||||+|++++. .|+|+|++.....+.+ +........++|+|.++.....+ +....... +..
T Consensus 225 ~~~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~--~~~~~~~~--~~~-- 298 (534)
T 1zpu_A 225 TDMLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQ--NYVDSIDN--FLD-- 298 (534)
T ss_dssp ESCEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCC--CCCSCSSC--SCC--
T ss_pred eceEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCC--Cccccccc--ccc--
Confidence 999999999999999999864 4789999886544221 11223456899999875421100 00011100 000
Q ss_pred ccccCCCCCCCCCCCCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCC
Q 008351 335 YSNLTGLTDGPHWVPVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTP 414 (569)
Q Consensus 335 ~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~ 414 (569)
...+.++.. ...+..+++++.+.+.+... .++ ...|.+||++|..|+ .|.|...+.. |.+
T Consensus 299 ~~~l~p~~~----~~~~~~~~~~~~l~~~~~~~----------~~~-~~~~~iNg~s~~~~~-~P~L~~~~~~--~~~-- 358 (534)
T 1zpu_A 299 DFYLQPYEK----EAIYGEPDHVITVDVVMDNL----------KNG-VNYAFFNNITYTAPK-VPTLMTVLSS--GDQ-- 358 (534)
T ss_dssp GGGCCBSSC----CCCCCSCSEEEEEEEEEEEC----------TTS-CEEEEETTBCCCCCS-SCHHHHHTTS--GGG--
T ss_pred cccceeCCC----CCCCCCCCeEEEEEEEeecc----------CCc-eeEEEECCCcccCCC-CCceeeeccc--Ccc--
Confidence 012222221 12335677887776654321 122 346899999998886 4544332211 111
Q ss_pred CCCCCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcC-------
Q 008351 415 NFPNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFG------- 487 (569)
Q Consensus 415 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g------- 487 (569)
... +.. ...++.++.++.|++|+|+|+|.+. +.||||||||+|+||+++.+
T Consensus 359 --~~~-~~~----------------~~~~~~~~~~~~g~~v~ivi~N~~~---~~HP~HLHGh~F~Vl~~~~~~~~~~~G 416 (534)
T 1zpu_A 359 --ANN-SEI----------------YGSNTHTFILEKDEIVEIVLNNQDT---GTHPFHLHGHAFQTIQRDRTYDDALGE 416 (534)
T ss_dssp --TTC-GGG----------------GCSSSCEEEECTTCEEEEEEEECSS---SCEEEEETTCCEEEEEECCCCCGGGTC
T ss_pred --cCC-Ccc----------------cCCCceEEEeCCCCEEEEEEeCCCC---CCCCeEecCCceEEEeecCCccccccC
Confidence 101 110 1223467889999999999999764 89999999999999999864
Q ss_pred ---cCCcccccccccCCCCCccceEEeCCCcEEEEEEEeCCceeEEEeeccccccccccEEEEEEec
Q 008351 488 ---NYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVEN 551 (569)
Q Consensus 488 ---~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 551 (569)
.|++.. ... ...+|+|||||.|++++|++|||++||||.|+|||||++|++.|||++|.|.+
T Consensus 417 ~p~~~~~~~-~~~-~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~ 481 (534)
T 1zpu_A 417 VPHSFDPDN-HPA-FPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDP 481 (534)
T ss_dssp CCCCCBTTB-CCC-CCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECH
T ss_pred cccccCccc-ccc-ccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECc
Confidence 344321 112 24689999999999999999999999999999999999999999999999864
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=7.6e-91 Score=754.38 Aligned_cols=471 Identities=26% Similarity=0.443 Sum_probs=364.4
Q ss_pred cccceEEEEEEEEEEE--eccCcee-eEEEEEcCCCCCCeEEEecCCEEEEEEEeCC-CCceeEeeecccccCCCCCCCC
Q 008351 21 ASAAIVEHSFHVKNLT--IGRLCRQ-RVITAVNGRLPGPTIRVHEGDTLVVHVFNES-PYNITIHWHGIFQLLSPWADGP 96 (569)
Q Consensus 21 ~~~~~~~~~l~~~~~~--~~~~g~~-~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l-~~~~~iH~HG~~~~~~~~~DG~ 96 (569)
+.+++++|+|++++.. +.++|+. +.+|+|||++|||+|++++||+|+|+|+|+| +++++|||||+++.+.+||||+
T Consensus 29 ~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~ 108 (559)
T 2q9o_A 29 DTGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGA 108 (559)
T ss_dssp CCCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCC
T ss_pred CCCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCC
Confidence 3677899999999999 8999999 9999999999999999999999999999999 6899999999999988999999
Q ss_pred CCcccccCCC-CCeeEEEEEeCCCCcceeEecchhhhhc-cceeeEEEeCCCCCCCCCCCCCCce-eEEeeeeeccCHHH
Q 008351 97 NMITQCPITP-GRSYTYKFNVINQEGTLWWHGHVSLLRA-TVYGALIIRPKSGHEYPYPKPDKEV-PILLGEWWNANVVD 173 (569)
Q Consensus 97 ~~~tq~~i~p-G~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~d~e~-~l~l~d~~~~~~~~ 173 (569)
|+++||+|+| |++|+|+|++ .++||||||||...+.. ||+|+|||++++.. .+|.|. +|+|+||+++...+
T Consensus 109 ~~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d~~~l~l~Dw~~~~~~~ 182 (559)
T 2q9o_A 109 NGVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDIDLGVFPITDYYYRAADD 182 (559)
T ss_dssp BTTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHH
T ss_pred CccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCcccceEEEEeccccCCHHH
Confidence 9999999999 9999999998 88999999999988876 99999999987643 467777 99999999998877
Q ss_pred HHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCC
Q 008351 174 VENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYT 253 (569)
Q Consensus 174 ~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~ 253 (569)
+..... ++....++.++|||+.. ..|... ...+.++|++|++|||||||+|..+.+.|+|+||+|+||++||.++
T Consensus 183 ~~~~~~--~~~~~~~d~~liNG~~~--~~~~~~-g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 257 (559)
T 2q9o_A 183 LVHFTQ--NNAPPFSDNVLINGTAV--NPNTGE-GQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPV 257 (559)
T ss_dssp HHHHHT--TSCCCCBSEEEETTBCB--CTTTCC-BCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred Hhhhhh--cCCCCccceeEECCccc--cCcCCC-CCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCccc
Confidence 654332 22345688999999953 235321 3457899999999999999999999999999999999999999999
Q ss_pred CceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeee--cccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCC--CCc
Q 008351 254 DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARA--YASAPQIPFDNTTTRGIVVYDGAASSANPLMPALPAFN--DTP 329 (569)
Q Consensus 254 ~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~--~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~--~~~ 329 (569)
+|+.++++.|+|||||||+|++++.+|+|+|++.. ...+.. .......++|+|.+..... |..+.+. +..
T Consensus 258 ~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~--~~~~~~~ail~y~~~~~~~----P~~~~~~~~~~~ 331 (559)
T 2q9o_A 258 NAMTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGG--SLNPHPAAIFHYAGAPGGL----PTDEGTPPVDHQ 331 (559)
T ss_dssp EEEEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCC--BSSSCCEEEEEETTSCCSC----CCCCCCCCCCCT
T ss_pred CceEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCC--CCCCceeEEEEECCCCCCC----CCCCCCcCCCcc
Confidence 99999999999999999999999778999999987 333321 2233468999998764321 2211111 100
Q ss_pred cccccccccCCCCCCCCCCC-CCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhccc
Q 008351 330 TAHKFYSNLTGLTDGPHWVP-VPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNV 408 (569)
Q Consensus 330 ~~~~~~~~l~~l~~~~~~~~-~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~ 408 (569)
+... .++.+......+.. .....+.++.+.... ..+..+.|.|||++|..+...|+|...+.+.
T Consensus 332 ~~~~--~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~ 396 (559)
T 2q9o_A 332 CLDT--LDVRPVVPRSVPVNSFVKRPDNTLPVALDL-------------TGTPLFVWKVNGSDINVDWGKPIIDYILTGN 396 (559)
T ss_dssp TCCC--SCCCBSSCCBCCCTTCCCCGGGEEEEEEEC-------------SSSSSCEEEETTBCCCCCTTSCHHHHHHHTC
T ss_pred cccc--cccccCCCCCCCCcccccceeEEEEEEeec-------------CCCceEEEEECCEecccCCCCCcHhHhhcCC
Confidence 0000 12222211110100 111123333333221 1233568999999997654356655544321
Q ss_pred CCccCCCCCCCCCCCccCCCCCCCCCccccCCCCcceEEEccC-CCEEEEEEEeCCC-CCCCCCCeeeecCcEEEEEeCc
Q 008351 409 GGIYTPNFPNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKF-NSTVEIVLQNTAL-IAVENHPIHIHGFDFHVLAQGF 486 (569)
Q Consensus 409 ~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ve~~l~N~~~-~~~~~HP~HlHG~~F~Vl~~g~ 486 (569)
.+|+ .+..++.++. +++++|+++|... ...+.||||||||+||||+++.
T Consensus 397 -----~~~~------------------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~ 447 (559)
T 2q9o_A 397 -----TSYP------------------------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSP 447 (559)
T ss_dssp -----CCCC------------------------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESC
T ss_pred -----ccCC------------------------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEeccc
Confidence 0111 1234556654 5788888888541 0147999999999999999997
Q ss_pred ---------CcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeCCceeEEEeeccccccccccEEEEEEecC
Q 008351 487 ---------GNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVENG 552 (569)
Q Consensus 487 ---------g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 552 (569)
|.|++..+...+|+.+|+|||||.||+++|++|||++||||.|||||||++|++.|||++|.|+..
T Consensus 448 ~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~~ 522 (559)
T 2q9o_A 448 DVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERPA 522 (559)
T ss_dssp CCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECHH
T ss_pred ccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECcc
Confidence 788765555678999999999999999999999999999999999999999999999999998753
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=3e-90 Score=741.91 Aligned_cols=471 Identities=29% Similarity=0.515 Sum_probs=358.1
Q ss_pred EEEEEEEEEEEeccCceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-----CceeEeeecccccCCCCCCCCCCcc
Q 008351 26 VEHSFHVKNLTIGRLCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESP-----YNITIHWHGIFQLLSPWADGPNMIT 100 (569)
Q Consensus 26 ~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~-----~~~~iH~HG~~~~~~~~~DG~~~~t 100 (569)
.+|+|++++..++++|+++.+|+|||++ ||+|++++||+|+|+|+|+|+ ++++|||||+++.+.+|+||+|+++
T Consensus 5 ~~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vt 83 (503)
T 1hfu_A 5 SVDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVN 83 (503)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCcccc
Confidence 3689999999999999999999999999 999999999999999999999 9999999999999889999999999
Q ss_pred cccCCCCCeeEEEEEeCCCCcceeEecchhhhhc-cceeeEEEeCCCCC-CCCCCCCCCceeEEeeeeeccCHHHHHHHH
Q 008351 101 QCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRA-TVYGALIIRPKSGH-EYPYPKPDKEVPILLGEWWNANVVDVENQA 178 (569)
Q Consensus 101 q~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~-~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 178 (569)
||+|+||++|+|+|++++++||||||||.+.+.. ||+|+|||+++.+. +.++...++|++|+|+||+++...++.
T Consensus 84 q~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~--- 160 (503)
T 1hfu_A 84 QCPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ--- 160 (503)
T ss_dssp BCCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC---
T ss_pred cCCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc---
Confidence 9999999999999996689999999999998876 99999999987532 222322246999999999998765431
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCCceEe
Q 008351 179 QITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTDPYVT 258 (569)
Q Consensus 179 ~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~ 258 (569)
+ ...++.++|||+. .+.|... ...+.++|++|++|||||||+|+.+.+.|+|+||+|+||++||.+++|+.+
T Consensus 161 ---~--~~~~d~~liNG~~--~~~~~~~-~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~ 232 (503)
T 1hfu_A 161 ---G--AAQPDATLINGKG--RYVGGPA-AELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTV 232 (503)
T ss_dssp --------CCSEEEETTBC--CBTTCCC-CCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred ---C--CCCCCEEEECccc--ccCCCCC-CcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCcccccccc
Confidence 1 1357899999994 3566531 345899999999999999999999999999999999999999999999999
Q ss_pred eEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCC--CCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccccccc
Q 008351 259 DVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQ--IPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYS 336 (569)
Q Consensus 259 d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~--~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~ 336 (569)
+++.|+|||||||+|++++.+|+|+|++.....+.+ ..+......++|+|.+.....+.. +..|... ... ..
T Consensus 233 ~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~-~~~~~~~---~l~--~~ 306 (503)
T 1hfu_A 233 DRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTT-SANPNPA---QLN--EA 306 (503)
T ss_dssp SBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCC-CCCSSCC---BCC--GG
T ss_pred CeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCC-CCCCccC---CCc--cc
Confidence 999999999999999999778999999986532110 001222346999998865332111 1111110 000 12
Q ss_pred ccCCCCCCCCCC-CCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCC
Q 008351 337 NLTGLTDGPHWV-PVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPN 415 (569)
Q Consensus 337 ~l~~l~~~~~~~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~ 415 (569)
++.++.....+. ..+...+.++.+.+.. ++. .|.|||++|..++ .|++...+.+ ...
T Consensus 307 ~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~~~--~~~iNg~~~~~~~-~P~l~~~~~g---~~~-- 364 (503)
T 1hfu_A 307 DLHALIDPAAPGIPTPGAADVNLRFQLGF--------------SGG--RFTINGTAYESPS-VPTLLQIMSG---AQS-- 364 (503)
T ss_dssp GCBBSSSCSCSSCSSTTCSSEEEECCEEE--------------ETT--EEEETTBCCCCCS-SCHHHHHHTT---CCS--
T ss_pred cccccCccCCCCcccCCcceEEEEEEeec--------------cCc--eEEECCCccCCCC-CcchhhhhcC---Ccc--
Confidence 333332221111 1122344444332221 122 7899999998887 4555443322 110
Q ss_pred CCCCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCccccc
Q 008351 416 FPNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDI 495 (569)
Q Consensus 416 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~ 495 (569)
+. ....++.++.++.|++|||+++|.. ..+.||||||||+|+||+++.+
T Consensus 365 -----~~----------------~~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~-------- 413 (503)
T 1hfu_A 365 -----AN----------------DLLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGS-------- 413 (503)
T ss_dssp -----GG----------------GSSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTC--------
T ss_pred -----cc----------------cCCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCC--------
Confidence 00 0122347889999999999999643 2479999999999999999754
Q ss_pred ccccCCCCCccceEEe-CCCcEEEEEEEeCCceeEEEeeccccccccccEEEEEEecCCCCCCCCCCCC-CCCCCC
Q 008351 496 KKFNLVNPQRRNTIAV-PVGGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVENGPTPATRLPPPP-ADLPQC 569 (569)
Q Consensus 496 ~~~~~~~p~~rDTv~v-p~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p-~~~~~c 569 (569)
..+|+.+|.|||||.| |+++|++|||++||||.|+|||||++|++.|||++|.|.+.+ .+++.++| ...+.|
T Consensus 414 ~~~n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~~C 487 (503)
T 1hfu_A 414 STYNFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN--TVDANNPPVEWAQLC 487 (503)
T ss_dssp CCCCCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH--HHHHCCCCHHHHHHH
T ss_pred CccccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh--hhhccCCChHHhhhc
Confidence 2467789999999999 999999999999999999999999999999999999986542 23344444 345555
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=9.8e-84 Score=681.11 Aligned_cols=405 Identities=21% Similarity=0.335 Sum_probs=320.2
Q ss_pred ccceEEEEEEEEEEEeccCceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCccc
Q 008351 22 SAAIVEHSFHVKNLTIGRLCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQ 101 (569)
Q Consensus 22 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq 101 (569)
.+.+++|+|++++..+.++|+++.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.+ |+||++
T Consensus 13 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~---- 86 (439)
T 2xu9_A 13 QGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF---- 86 (439)
T ss_dssp BTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT----
T ss_pred CCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc----
Confidence 46678999999999999999999999999999999999999999999999999999999999999876 699986
Q ss_pred ccCCCCCeeEEEEEeC-CCCcceeEecchhh----hhc-cceeeEEEeCCCCCCCCCCCCCCceeEEeeeeeccCHHHH-
Q 008351 102 CPITPGRSYTYKFNVI-NQEGTLWWHGHVSL----LRA-TVYGALIIRPKSGHEYPYPKPDKEVPILLGEWWNANVVDV- 174 (569)
Q Consensus 102 ~~i~pG~~~~y~~~~~-~~~Gt~wYH~H~~~----~~~-Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~- 174 (569)
+.|+||++|+|+|+++ +++||||||||.++ +.. ||+|+|||+++.+.. +....++|++|+|+||+++.....
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~~~~ 165 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGRPAP 165 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTEECC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCCcCC
Confidence 3599999999999985 48999999999865 333 999999999875321 111357899999999998753100
Q ss_pred -HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCC
Q 008351 175 -ENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYT 253 (569)
Q Consensus 175 -~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~ 253 (569)
.......| ..++.++|||+. .|.++|++| +|||||||+|+.+.+.|+|+||+|+||++||+++
T Consensus 166 ~~~~~~~~g---~~~~~~~iNG~~------------~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~ 229 (439)
T 2xu9_A 166 HTPMDWMNG---KEGDLVLVNGAL------------RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFL 229 (439)
T ss_dssp CCHHHHHHC---CCCSEEEETTEE------------SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEE
T ss_pred CCccccccC---CCCCEEEECCcc------------CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCC
Confidence 00000112 246799999994 378999999 9999999999999999999999999999999998
Q ss_pred -CceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCC-------------CCCCcceEEEEEEcCCCCCCCCCC
Q 008351 254 -DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQI-------------PFDNTTTRGIVVYDGAASSANPLM 319 (569)
Q Consensus 254 -~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~-------------~~~~~~~~ail~y~~~~~~~~~~~ 319 (569)
+|+.++++.|+|||||||+|++++ +|+|+++|+....+... ........++++|.+.... ..+
T Consensus 230 ~~p~~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~ 306 (439)
T 2xu9_A 230 EEPLEVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP--LPL 306 (439)
T ss_dssp EEEEEESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC--CCC
T ss_pred CCceEeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc--ccC
Confidence 899999999999999999999995 89999999865433210 0112346788999875321 111
Q ss_pred CCCCCCCCCccccccccccCCCCCCCCCCCCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCch
Q 008351 320 PALPAFNDTPTAHKFYSNLTGLTDGPHWVPVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLS 399 (569)
Q Consensus 320 p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~ 399 (569)
|. .+.++. +...+ ..++++.+.+.. . + ..|.+||++|..+.
T Consensus 307 p~---------------~l~~~~----~l~~~-~~~r~~~l~~~~--~------------g--~~~~iNg~~~~~~~--- 347 (439)
T 2xu9_A 307 PK---------------ALSPFP----TLPAP-VVTRRLVLTEDM--M------------A--ARFFINGQVFDHRR--- 347 (439)
T ss_dssp CS---------------CCCCCC----CCCCC-SEEEEEEEEEEG--G------------G--TEEEETTBCCCTTC---
T ss_pred cc---------------cCCCcc----cCCCC-CcceEEEEEeec--c------------C--ceEeECCEECCCCC---
Confidence 11 010110 00011 223555554432 0 1 26899998875332
Q ss_pred hhhhhhcccCCccCCCCCCCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcE
Q 008351 400 LLQAFFFNVGGIYTPNFPNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDF 479 (569)
Q Consensus 400 ~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F 479 (569)
..+.++.|++|+|+|.|.+. +.||||||||+|
T Consensus 348 ---------------------------------------------~~~~~~~g~~~~~~~~N~~~---~~HP~HLHG~~F 379 (439)
T 2xu9_A 348 ---------------------------------------------VDLKGQAQTVEVWEVENQGD---MDHPFHLHVHPF 379 (439)
T ss_dssp ---------------------------------------------CCEEECTTCEEEEEEEECSS---SCEEEEESSCCB
T ss_pred ---------------------------------------------CceecCCCCEEEEEEEcCCC---CCCCceeCCCcE
Confidence 11467899999999999764 899999999999
Q ss_pred EEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeCCceeEEEeeccccccccccEEEEEEe
Q 008351 480 HVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 480 ~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
|||+++.+. +.+|.|||||.|++++|++|||++||||.|+|||||++|||.|||++|+|+
T Consensus 380 ~Vl~~~g~~-----------~~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 380 QVLSVGGRP-----------FPYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp EEEEETTEE-----------CSSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred EEEeeCCCC-----------CCCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 999986542 247899999999999999999999999999999999999999999999984
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=2.7e-83 Score=678.33 Aligned_cols=407 Identities=16% Similarity=0.206 Sum_probs=316.5
Q ss_pred ceEEEEEEEEEEEecc-CceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccc
Q 008351 24 AIVEHSFHVKNLTIGR-LCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQC 102 (569)
Q Consensus 24 ~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~ 102 (569)
.+++|+|++++..+++ +|+.+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.++ +||+| ||
T Consensus 17 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~ 91 (451)
T 2uxt_A 17 RGQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---AR 91 (451)
T ss_dssp SSCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GG
T ss_pred CceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cC
Confidence 3578999999999988 799999999999999999999999999999999999999999999999987 79998 89
Q ss_pred cCCCCCeeEEEEEeCCCCcceeEecchhhhh----c-cceeeEEEeCCCCCCCCCCC--CCCceeEEeeeeeccCHHHHH
Q 008351 103 PITPGRSYTYKFNVINQEGTLWWHGHVSLLR----A-TVYGALIIRPKSGHEYPYPK--PDKEVPILLGEWWNANVVDVE 175 (569)
Q Consensus 103 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~----~-Gl~G~liV~~~~~~~~~~~~--~d~e~~l~l~d~~~~~~~~~~ 175 (569)
+|+||++|+|+|++++++||||||||.++.+ . ||+|+|||+++++...+++. .++|++|+|+||+++...++.
T Consensus 92 ~i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~ 171 (451)
T 2uxt_A 92 MMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPE 171 (451)
T ss_dssp CBCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEE
T ss_pred cCCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCcee
Confidence 9999999999999955699999999996533 2 99999999987654333333 478999999999987654321
Q ss_pred HHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEE-eCceeEEEEecCCCC-
Q 008351 176 NQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKI-ANHKFTVVSVDASYT- 253 (569)
Q Consensus 176 ~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~~- 253 (569)
. ...+.....+++++|||+.+ +.++|++| +|||||||+|+.+.+.|+| +||+|+||++||+++
T Consensus 172 ~--~~~~~~~~~~d~~liNG~~~------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~ 236 (451)
T 2uxt_A 172 Y--NEPGSGGFVGDTLLVNGVQS------------PYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLP 236 (451)
T ss_dssp C--CCCSSSCCCCSEEEETTEES------------CEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEE
T ss_pred c--ccccCCCCcCCEEEECCccc------------ceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccC
Confidence 1 01122335678999999943 78999999 9999999999999999999 899999999999998
Q ss_pred CceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCC------CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCC
Q 008351 254 DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQI------PFDNTTTRGIVVYDGAASSANPLMPALPAFND 327 (569)
Q Consensus 254 ~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~------~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~ 327 (569)
+|+.++++.|+|||||||+|+++ .+|+|++++.....+.+. ........++++|.......+. ...+|
T Consensus 237 ~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-~~~~p---- 310 (451)
T 2uxt_A 237 APVSVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-TDSLP---- 310 (451)
T ss_dssp EEEEESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----CCC----
T ss_pred CceEeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc-cccCc----
Confidence 89999999999999999999999 468999998765432210 0112234688888765422110 01111
Q ss_pred CccccccccccCCCCCCCCCCCCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcc
Q 008351 328 TPTAHKFYSNLTGLTDGPHWVPVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFN 407 (569)
Q Consensus 328 ~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~ 407 (569)
..|.++.. .+...+.+..+.+. + .|+|||++|..+.
T Consensus 311 --------~~L~~~~~------~~~~~~~~~~~~l~----------------~---~~~iNg~~f~~~~----------- 346 (451)
T 2uxt_A 311 --------MRLLPTEI------MAGSPIRSRDISLG----------------D---DPGINGQLWDVNR----------- 346 (451)
T ss_dssp --------SCSSSSCC------CCCCCSEEEEEEEC----------------S---SSSBTTBCCCTTC-----------
T ss_pred --------cccCCCCC------CCCCCcceEEEEEe----------------e---EEEECCEeCCCCC-----------
Confidence 11222211 11122333333221 1 4789988774322
Q ss_pred cCCccCCCCCCCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcC
Q 008351 408 VGGIYTPNFPNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFG 487 (569)
Q Consensus 408 ~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g 487 (569)
..+.++.|++|+|+|+|. +.||||||||+|+||+++.
T Consensus 347 -------------------------------------~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~G- 383 (451)
T 2uxt_A 347 -------------------------------------IDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVNG- 383 (451)
T ss_dssp -------------------------------------CCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEETT-
T ss_pred -------------------------------------CcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeCC-
Confidence 124678999999999995 5899999999999999852
Q ss_pred cCCcccccccccCCCCCccceEEeCCCcEEEEEEEeCCcee----EEEeeccccccccccEEEEEEecCC
Q 008351 488 NYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQANNPGV----WFVHCHLDVHLPWGLATAFVVENGP 553 (569)
Q Consensus 488 ~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~----w~~HCHil~H~d~GM~~~~~V~~~~ 553 (569)
..+++.+|.|||||.| +++++|+|++||||. |||||||++|||.|||++|+|.+.+
T Consensus 384 --------~~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 384 --------AMPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp --------BCCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred --------cCCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 2345678999999999 999999999999988 9999999999999999999998653
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=2.5e-81 Score=674.11 Aligned_cols=421 Identities=20% Similarity=0.280 Sum_probs=319.3
Q ss_pred eEEEEEEEEEEE--eccCceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccc
Q 008351 25 IVEHSFHVKNLT--IGRLCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQC 102 (569)
Q Consensus 25 ~~~~~l~~~~~~--~~~~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~ 102 (569)
+++|+|++++.. +.++|+.+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++... +||++ ||
T Consensus 36 ~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~~--~DG~~---~~ 110 (534)
T 3abg_A 36 IWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRAA--FDGWA---ED 110 (534)
T ss_dssp CEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCTT--TTTCS---SS
T ss_pred eEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCCC--CCCCC---CC
Confidence 478999999654 677899999999999999999999999999999999999999999999998764 89975 69
Q ss_pred cCCCCCeeEEEEEeCCCCcceeEecchhhhh-----ccceeeEEEeCCCCCCCCCCC--CCCceeEEeeeeeccCHHHHH
Q 008351 103 PITPGRSYTYKFNVINQEGTLWWHGHVSLLR-----ATVYGALIIRPKSGHEYPYPK--PDKEVPILLGEWWNANVVDVE 175 (569)
Q Consensus 103 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~d~e~~l~l~d~~~~~~~~~~ 175 (569)
+|.||++|+|+|++.+++||||||||.++++ .||+|+|||+++.+...+++. .++|++|+|+||+++...++.
T Consensus 111 ~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~~~ 190 (534)
T 3abg_A 111 ITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGNLV 190 (534)
T ss_dssp CBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSCBC
T ss_pred CCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCcee
Confidence 9999999999999856689999999998754 299999999998766555544 267899999999887643321
Q ss_pred HHHHhcCC-CCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeC-------ceeEEEE
Q 008351 176 NQAQITGG-APNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIAN-------HKFTVVS 247 (569)
Q Consensus 176 ~~~~~~g~-~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~g-------h~~~via 247 (569)
. ..+. ....+|.++|||+.+ +.+.|++ ++|||||||+|+.+.+.|+|++ |+|+||+
T Consensus 191 ~---~~~~~~~~~gd~~lvNG~~~------------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa 254 (534)
T 3abg_A 191 T---TNGELNSFWGDVIHVNGQPW------------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA 254 (534)
T ss_dssp C---CTTCSSCCCCSEEEETTEES------------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE
T ss_pred c---cCCCCccccCceeccCCccC------------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEE
Confidence 1 0111 223578999999954 5688888 5899999999999999999987 9999999
Q ss_pred ecCCCC-CceEeeEEEEcCCcEEEEEEEeCCCCc-eeEEEeeecc-cCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCC
Q 008351 248 VDASYT-DPYVTDVVVIAPGQTTDVLLKADQPVG-SYYMAARAYA-SAPQIPFDNTTTRGIVVYDGAASSANPLMPALPA 324 (569)
Q Consensus 248 ~DG~~~-~p~~~d~v~l~pgeR~dv~v~~~~~~G-~y~l~~~~~~-~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~ 324 (569)
+||+++ +|+.++++.|+|||||||+|++++.+| +|+|+..... .+.+.........++++|..............|
T Consensus 255 ~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P- 333 (534)
T 3abg_A 255 SDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVP- 333 (534)
T ss_dssp ETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCC-
T ss_pred eCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCc-
Confidence 999965 999999999999999999999997677 6999875422 121111111234588998764321000000011
Q ss_pred CCCCccccccccccCCCCCCCCCCCCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhh
Q 008351 325 FNDTPTAHKFYSNLTGLTDGPHWVPVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAF 404 (569)
Q Consensus 325 ~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~ 404 (569)
..+.++.. +. .+...++.+.+ .. . ...|.|||++|..+.
T Consensus 334 -----------~~L~~~~~---p~-~~~~~~~~~~~--~~--------------~--~~~w~iNG~~f~~~~-------- 372 (534)
T 3abg_A 334 -----------ANLRDVPF---PS-PTTNTPRQFRF--GR--------------T--GPTWTINGVAFADVQ-------- 372 (534)
T ss_dssp -----------CCCCCCSC---CC-CCCCCCEEEEC--SC--------------C--CSTTCCCCBTTBCTT--------
T ss_pred -----------cccccCCC---CC-CccccceEEEE--ec--------------c--CceeEECCcccCCCC--------
Confidence 11222110 11 12223443322 11 0 125889998885432
Q ss_pred hcccCCccCCCCCCCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEe
Q 008351 405 FFNVGGIYTPNFPNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQ 484 (569)
Q Consensus 405 ~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~ 484 (569)
. | ....++.|++|+|+|+|.+. .+.||||||||+|+||++
T Consensus 373 --------------~-p-----------------------~l~~v~~G~~~~w~i~N~~~--~~~HP~HLHG~~F~Vl~~ 412 (534)
T 3abg_A 373 --------------N-R-----------------------LLANVPVGTVERWELINAGN--GWTHPIHIHLVDFKVISR 412 (534)
T ss_dssp --------------S-C-----------------------CCCEECTTCEEEEEEEECSS--SCCCCEEESSCCEEEEEE
T ss_pred --------------C-c-----------------------ceeeccCCCEEEEEEEcCCC--CCCcCEEECCeeEEEEEE
Confidence 0 0 01246889999999999752 369999999999999999
Q ss_pred CcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEE-eCCceeEEEeeccccccccccEEEEEEecCC
Q 008351 485 GFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQ-ANNPGVWFVHCHLDVHLPWGLATAFVVENGP 553 (569)
Q Consensus 485 g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~-adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 553 (569)
+.|.+.. ..+++.+ .|||||.|+|+++++|||+ +||||.|||||||++|++.|||+.|.|...+
T Consensus 413 ~~g~~~~----~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 413 TSGNNAR----TVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp SSCCSSS----CCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred cCCCCcC----cCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 6554321 2244455 8999999999999999999 8999999999999999999999999998765
No 12
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=1.5e-80 Score=668.27 Aligned_cols=427 Identities=20% Similarity=0.241 Sum_probs=315.4
Q ss_pred ceEEEEEEEEEEEecc--CceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCC----------------------cee
Q 008351 24 AIVEHSFHVKNLTIGR--LCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPY----------------------NIT 79 (569)
Q Consensus 24 ~~~~~~l~~~~~~~~~--~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~----------------------~~~ 79 (569)
...+|+|++++..... ++..+.+|+|||++|||+|++++||+|+|+|+|+|+. +|+
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~ts 103 (513)
T 2wsd_A 24 EKTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTV 103 (513)
T ss_dssp SCEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBC
T ss_pred CceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcE
Confidence 3455999999988654 4579999999999999999999999999999999975 899
Q ss_pred EeeecccccCCCCCCCCCC--cccccCCCCCee---EEEEEeCCCCcceeEecchhhhh-----ccceeeEEEeCCCCCC
Q 008351 80 IHWHGIFQLLSPWADGPNM--ITQCPITPGRSY---TYKFNVINQEGTLWWHGHVSLLR-----ATVYGALIIRPKSGHE 149 (569)
Q Consensus 80 iH~HG~~~~~~~~~DG~~~--~tq~~i~pG~~~---~y~~~~~~~~Gt~wYH~H~~~~~-----~Gl~G~liV~~~~~~~ 149 (569)
|||||+++.+. +||+|+ ++||+|+||++| +|+|++.+++||||||||.++.+ +||+|+|||+++.+..
T Consensus 104 iHwHGl~~~~~--~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~ 181 (513)
T 2wsd_A 104 VHLHGGVTPDD--SDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKR 181 (513)
T ss_dssp EEEETCCCCGG--GSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGG
T ss_pred EEcCCCcCCCc--cCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEecccccc
Confidence 99999999854 899996 789999999555 99999856899999999998642 2999999999987655
Q ss_pred CCCCCCCCceeEEeeeeeccCHHHHHHHHHh----------cCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCc
Q 008351 150 YPYPKPDKEVPILLGEWWNANVVDVENQAQI----------TGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGK 219 (569)
Q Consensus 150 ~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~~----------~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~ 219 (569)
.+++.+|+|++|+|+||+++...++...... .......++++||||+.+ +.+.|++|
T Consensus 182 ~~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~------------p~~~v~~~- 248 (513)
T 2wsd_A 182 LKLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW------------PYLEVEPR- 248 (513)
T ss_dssp GCCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES------------CEEECCSS-
T ss_pred ccCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc------------ceEEecCC-
Confidence 5566678999999999988765332111000 001124578999999944 67899885
Q ss_pred EEEEEEEecCCCCeEEEEEeCc-eeEEEEecCCCC-CceEeeEEEEcCCcEEEEEEEeCCCCcee-EEEeeecccCCCCC
Q 008351 220 TYLLRIINAALNNQLFFKIANH-KFTVVSVDASYT-DPYVTDVVVIAPGQTTDVLLKADQPVGSY-YMAARAYASAPQIP 296 (569)
Q Consensus 220 ~~rlRliN~~~~~~~~~~i~gh-~~~via~DG~~~-~p~~~d~v~l~pgeR~dv~v~~~~~~G~y-~l~~~~~~~~~~~~ 296 (569)
+|||||||+|+.+.+.|+|+|| +|+|||+||+++ +|+.++++.|+|||||||+|++++.+|++ .++.. ..+.. .
T Consensus 249 ~~RlRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~--~~~~~-~ 325 (513)
T 2wsd_A 249 KYRFRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESIILANS--AGCGG-D 325 (513)
T ss_dssp EEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEEEEEC--CCSSS-S
T ss_pred EEEEEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEEEEec--ccccc-c
Confidence 8999999999999999999999 999999999998 89999999999999999999999767873 33322 12211 1
Q ss_pred CCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCCCCCCCCCceEEEEEEeccccccccccccc
Q 008351 297 FDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSNLTGLTDGPHWVPVPRQVDKHMFVTVGLALDRCAANATCQ 376 (569)
Q Consensus 297 ~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~ 376 (569)
.......++++|.............+|. .+..+.. .+. .+...++++.+.....
T Consensus 326 ~~~~~~~~il~~~~~~~~~~~~~~~~p~------------~l~~~~~--~~~-~~~~~~~~~~l~~~~~----------- 379 (513)
T 2wsd_A 326 VNPETDANIMQFRVTKPLAQKDESRKPK------------YLASYPS--VQH-ERIQNIRTLKLAGTQD----------- 379 (513)
T ss_dssp CCTTTTTEEEEEECCSCCSSCCCCCCCS------------BCSCCGG--GCC-CCEEEEEEEEEEEEEC-----------
T ss_pred CCCCCCcceEEEEeccCcccCccCCCCc------------cccCCCC--ccc-CCCcceEEEEEEeecC-----------
Confidence 1122345789997653211100011111 0111000 000 1112234443332211
Q ss_pred CCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCCCCCCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEE
Q 008351 377 GPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNFPNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVE 456 (569)
Q Consensus 377 ~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve 456 (569)
..+...|.+||++|..+. .+.++.|++|+
T Consensus 380 --~~g~~~~~iNg~~~~~~~-------------------------------------------------~~~~~~g~~~~ 408 (513)
T 2wsd_A 380 --EYGRPVLLLNNKRWHDPV-------------------------------------------------TETPKVGTTEI 408 (513)
T ss_dssp --TTSCEEEEETTBCTTSCC-------------------------------------------------CBCCBTTCEEE
T ss_pred --CCCCceEeECCccCCCcc-------------------------------------------------cEecCCCCEEE
Confidence 112346789998773221 12457899999
Q ss_pred EEEEeCCCCCCCCCCeeeecCcEEEEEeCcC---cCCcccccccccC---------CCCCccceEEeCCCcEEEEEEEe-
Q 008351 457 IVLQNTALIAVENHPIHIHGFDFHVLAQGFG---NYNAARDIKKFNL---------VNPQRRNTIAVPVGGWAVIRFQA- 523 (569)
Q Consensus 457 ~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g---~~~~~~~~~~~~~---------~~p~~rDTv~vp~~g~~~irf~a- 523 (569)
|+|.|.+. +.||||||||+||||+++.. .|++. .++++ .++.|||||.|+|+++++|+|++
T Consensus 409 w~l~N~~~---~~HP~HlHG~~F~Vl~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~ 482 (513)
T 2wsd_A 409 WSIINPTR---GTHPIHLHLVSFRVLDRRPFDIARYQES---GELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFG 482 (513)
T ss_dssp EEEEECSS---SCEEEEESSCCEEEEEEEEBCHHHHHHH---CCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECC
T ss_pred EEEEcCCC---CCcCEeEeCceEEEEEecCccccccccc---ccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEec
Confidence 99999764 89999999999999998742 23221 11222 23469999999999999999999
Q ss_pred CCceeEEEeeccccccccccEEEEEEec
Q 008351 524 NNPGVWFVHCHLDVHLPWGLATAFVVEN 551 (569)
Q Consensus 524 dnpG~w~~HCHil~H~d~GM~~~~~V~~ 551 (569)
||||.|+|||||++|+|.|||+.|+|.+
T Consensus 483 dnpG~w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 483 PYSGRYVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp SCCEEEEEEESCHHHHTTTCEEEEEEBC
T ss_pred CCCCCEEEEcCChhhhhcCCceeEEEeC
Confidence 8999999999999999999999999975
No 13
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=9.4e-80 Score=650.67 Aligned_cols=417 Identities=22% Similarity=0.329 Sum_probs=309.2
Q ss_pred cccceEEEEEEEEEEEecc-CceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCc
Q 008351 21 ASAAIVEHSFHVKNLTIGR-LCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMI 99 (569)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~ 99 (569)
+.+.+++|+|++++..+.+ +|+.+.+|+|||++|||+||+++||+|+|+|+|.|+++|+|||||+++.+ ++||+|
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVPP--DQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCCG--GGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccCC--ccCCCc--
Confidence 5678899999999999987 59999999999999999999999999999999999999999999999864 589996
Q ss_pred ccccCCCCCeeEEEEEeCCC-CcceeEecchhhh----hc-cceeeEEEeCCCCCCCCCCCCCCceeEEeeeeeccCHHH
Q 008351 100 TQCPITPGRSYTYKFNVINQ-EGTLWWHGHVSLL----RA-TVYGALIIRPKSGHEYPYPKPDKEVPILLGEWWNANVVD 173 (569)
Q Consensus 100 tq~~i~pG~~~~y~~~~~~~-~Gt~wYH~H~~~~----~~-Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~ 173 (569)
||+|+||++|+|+|+++++ +||||||||.++. .. ||+|+|||+++++..+++ +.++ |+|+||+++...+
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 8999999999999999543 7999999998543 32 999999999987654332 3344 9999999876433
Q ss_pred HHH---HHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecC
Q 008351 174 VEN---QAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDA 250 (569)
Q Consensus 174 ~~~---~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG 250 (569)
+.. .....| ..++.++|||+.+ |.++|++|+ ||||||+|+.+.+.|+|+||+|+||++||
T Consensus 197 ~~~~~~~~~~~g---~~gd~~lvNG~~~------------p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DG 259 (481)
T 3zx1_A 197 IPNNNLNDWLNG---REGEFVLINGQFK------------PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDG 259 (481)
T ss_dssp CCCCCHHHHHHC---CCCSEEEETTEES------------CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETT
T ss_pred cccccchhhccC---CcCCEEEECCccC------------ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCC
Confidence 210 001112 3578999999943 699999998 99999999999999999999999999999
Q ss_pred CCC-CceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCc
Q 008351 251 SYT-DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTP 329 (569)
Q Consensus 251 ~~~-~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~ 329 (569)
+++ +|+.++++.|+|||||||+|+++ +++.|.|.+...+..............++++..... ...+| .
T Consensus 260 g~~~~P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~lP---~----- 328 (481)
T 3zx1_A 260 GLIEKTIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKE--NVELP---K----- 328 (481)
T ss_dssp EEEEEEEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECC--CCCCC---S-----
T ss_pred CccCCceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccccCccccCCCCceeEEEEecCCC--CccCC---c-----
Confidence 887 89999999999999999999999 578899988654432110000112233444432211 11112 1
Q ss_pred cccccccccCCCCCCCCCCCCCCCCceEEEEEEecccccccccccccCCCCCe------eEEeecCceeecCCCchhhhh
Q 008351 330 TAHKFYSNLTGLTDGPHWVPVPRQVDKHMFVTVGLALDRCAANATCQGPNGQR------FSASMNNHSFQFPTSLSLLQA 403 (569)
Q Consensus 330 ~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~in~~~~~~p~~~~~~~~ 403 (569)
.+.++. .....+++..+.+........ ......... ..|.|||+.|....
T Consensus 329 -------~l~~~~-------~~~~~~~~r~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~iNG~~~~~~~------- 384 (481)
T 3zx1_A 329 -------NLKIFK-------PSEEPKEFKEIIMSEDHMQMH---GMMGKSEGELKIALASMFLINRKSYDLKR------- 384 (481)
T ss_dssp -------CSCCCC-------CCCCCCEEEEEEEEECCSTTT---TGGGCCHHHHHHHHHTTEEETTBCCCTTC-------
T ss_pred -------cccCCC-------CCCCCCcEEEEEEeccchhcc---cccccccccccccccceeEECCEeCCCCC-------
Confidence 111111 001112333333332111000 000000000 13788887653111
Q ss_pred hhcccCCccCCCCCCCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEE
Q 008351 404 FFFNVGGIYTPNFPNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLA 483 (569)
Q Consensus 404 ~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~ 483 (569)
..+.++.|++|+|+|.|.+. +.|||||||+.|+|++
T Consensus 385 -----------------------------------------~~~~~~~G~~v~w~l~N~~~---~~Hp~HlHG~~F~vl~ 420 (481)
T 3zx1_A 385 -----------------------------------------IDLSSKLGVVEDWIVINKSH---MDHPFHIHGTQFELIS 420 (481)
T ss_dssp -----------------------------------------CCEEEETTCCEEEEEEECSS---SCEEEEETTCCEEEEE
T ss_pred -----------------------------------------ceEEeCCCCEEEEEEEcCCC---CceeEEEeccEEEEEE
Confidence 23578999999999999654 8999999999999999
Q ss_pred eC-cCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeCCceeEEEeeccccccccccEEEEEEe
Q 008351 484 QG-FGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 484 ~g-~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
++ .|. .....++.|||||.|+|+++++|+|+|||||.|||||||++|+|.|||+.|+|.
T Consensus 421 ~~~~g~--------~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 421 SKLNGK--------VQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp EEETTE--------EEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred ecccCC--------CCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 83 111 112245789999999999999999999999999999999999999999999996
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=4.6e-79 Score=644.78 Aligned_cols=385 Identities=19% Similarity=0.325 Sum_probs=295.2
Q ss_pred EEEcCC-CCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeE
Q 008351 47 TAVNGR-LPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWW 125 (569)
Q Consensus 47 ~~~NG~-~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wY 125 (569)
|+|||+ +|||+|++++||+|+|+|+|+|+++++|||||+++.+ ++||+|+ |+|.||++|+|+|++++++|||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~i~PG~~~~Y~f~~~~~~GT~wY 102 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FAITPGESYNYSFDVVNRAGTYLY 102 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GCBCTTCEEEEEEECCSCSEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---ccCCCCCEEEEEEEcCCCCCceEe
Confidence 999999 9999999999999999999999999999999999974 4899997 999999999999999558999999
Q ss_pred ecchh----hhhc-cceeeEEEeCCCCCCCCCCCCC-CceeEEeeeeeccCHHHHHH----HHHhcCCCCCCCceEEEcC
Q 008351 126 HGHVS----LLRA-TVYGALIIRPKSGHEYPYPKPD-KEVPILLGEWWNANVVDVEN----QAQITGGAPNISDAYTING 195 (569)
Q Consensus 126 H~H~~----~~~~-Gl~G~liV~~~~~~~~~~~~~d-~e~~l~l~d~~~~~~~~~~~----~~~~~g~~~~~~~~~liNG 195 (569)
|||.+ .+.. ||+|+|||+++++. .+++ +| +|++|+|+||+++. .++.. .....| ..++.++|||
T Consensus 103 H~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~---~~~~~~liNG 176 (448)
T 3aw5_A 103 HPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAG---FLGNAVLVNG 176 (448)
T ss_dssp EECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHHC---CCCSEEEETT
T ss_pred ccCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-CcccccccccccccC---ccccEEEECC
Confidence 99954 4443 99999999998765 3333 45 89999999999876 43211 001112 3578999999
Q ss_pred cCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEE--eC---ceeEEEEecCCCCC-ceEeeEEEEcCCcEE
Q 008351 196 KPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKI--AN---HKFTVVSVDASYTD-PYVTDVVVIAPGQTT 269 (569)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i--~g---h~~~via~DG~~~~-p~~~d~v~l~pgeR~ 269 (569)
+.+ +.++|++| +|||||||+|+.+.+.|+| +| |+|+|||+||++++ |+.++++.|+|||||
T Consensus 177 ~~~------------p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~ 243 (448)
T 3aw5_A 177 VKD------------AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERA 243 (448)
T ss_dssp EET------------CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEE
T ss_pred ccc------------ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceE
Confidence 943 78999999 9999999999999999999 99 99999999999996 999999999999999
Q ss_pred EEEEEeCCCCceeEEEeeecccCCCC---------CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccCC
Q 008351 270 DVLLKADQPVGSYYMAARAYASAPQI---------PFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSNLTG 340 (569)
Q Consensus 270 dv~v~~~~~~G~y~l~~~~~~~~~~~---------~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~ 340 (569)
||+|+++ .+.|+|++.....+.+. ........++++|.+...... |. .+..
T Consensus 244 dvlv~~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~------------~L~~ 303 (448)
T 3aw5_A 244 EVVVELG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP------VE------------ALSD 303 (448)
T ss_dssp EEEEEEC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC------CC------------CCSC
T ss_pred EEEEECC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC------cc------------ccCC
Confidence 9999998 37899998876543210 111234567888866432210 10 0111
Q ss_pred CCCCCCCCCCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCCCCCCC
Q 008351 341 LTDGPHWVPVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNFPNNP 420 (569)
Q Consensus 341 l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~ 420 (569)
+. +...+...++++.+..+ ...|.+||++|..+.
T Consensus 304 lp----~~~~~~~~~~~~~l~~~------------------~~~~~iNg~~~~~~~------------------------ 337 (448)
T 3aw5_A 304 PP----PEPPKPTRTRRFALSLS------------------GMQWTINGMFWNASN------------------------ 337 (448)
T ss_dssp CC----CCCCCCSEEEEEEEEEE------------------TTEEEETTBCCCTTC------------------------
T ss_pred CC----CCCCCCCceEEEEEeCC------------------CceeeECCCcCCCCC------------------------
Confidence 11 00122233444444321 125999999885322
Q ss_pred CCCccCCCCCCCCCccccCCCCcceEEE-ccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCccccccccc
Q 008351 421 PLKFDYTNPNVSNNTSLLFAPKLTSVKT-LKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFN 499 (569)
Q Consensus 421 p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~ 499 (569)
| .+. ++.|++|+|+|+|.+. .+.||||||||+||||+++ |.+........++
T Consensus 338 p------------------------~~~~~~~g~~v~~~i~N~~~--~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~ 390 (448)
T 3aw5_A 338 P------------------------LFEHVSVEGVELWEIVNDKA--SMPHPMHLHGFPMWIIERK-DSPRQVAELAVDN 390 (448)
T ss_dssp T------------------------TCCCEEECEEEEEEEEECSS--SCCEEEEESSSCBEEEEEE-SCCHHHHTTCCST
T ss_pred C------------------------ceeccCCCCeEEEEEEcCCC--CCCcCEEECCceEEEEEec-CCCcccccccccc
Confidence 0 012 5789999999999751 3899999999999999984 4443211222232
Q ss_pred ----CCCCCccceEEeCCCcEEEEE--EE---eCCceeEEEeeccccccccccEEEEEEe
Q 008351 500 ----LVNPQRRNTIAVPVGGWAVIR--FQ---ANNPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 500 ----~~~p~~rDTv~vp~~g~~~ir--f~---adnpG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
..++.|||||.|+|+++++|+ |+ +||| |+|||||++|||.|||++|+|.
T Consensus 391 ~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 391 RGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp TCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred cCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 334579999999999999766 88 8899 9999999999999999999883
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=2.5e-78 Score=670.00 Aligned_cols=468 Identities=18% Similarity=0.188 Sum_probs=306.7
Q ss_pred cceEEEEEEEEEEEec--cCceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCc-----------------------
Q 008351 23 AAIVEHSFHVKNLTIG--RLCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYN----------------------- 77 (569)
Q Consensus 23 ~~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~----------------------- 77 (569)
..++.|+|++++.... +++..+.+|+|||++|||+|++++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 3456788888888754 456788999999999999999999999999999999654
Q ss_pred ------------------eeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecchhhhh----c-
Q 008351 78 ------------------ITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLLR----A- 134 (569)
Q Consensus 78 ------------------~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~----~- 134 (569)
|+|||||+++.+ ++||++ ||+|.||++|+|+|++.+++||||||||.++.+ .
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~ 184 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhc
Confidence 678888888864 478875 899999999999999966789999999987643 2
Q ss_pred cceeeEEEeCCCCCCCCCCCCCCceeEEeeeeeccCHHHHHHHHH-------------hc---CCCCCCCceEEEcCcCC
Q 008351 135 TVYGALIIRPKSGHEYPYPKPDKEVPILLGEWWNANVVDVENQAQ-------------IT---GGAPNISDAYTINGKPG 198 (569)
Q Consensus 135 Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~~-------------~~---g~~~~~~~~~liNG~~~ 198 (569)
||+|+|||+++++..++++.+++|++|+|+||+++...+...... .. ......++.++|||+.+
T Consensus 185 Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~~ 264 (612)
T 3gyr_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCcc
Confidence 999999999887766777778999999999998765332210000 00 00123568899999943
Q ss_pred CCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCc-------eeEEEEecCCCC-CceEee------EEEEc
Q 008351 199 DLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANH-------KFTVVSVDASYT-DPYVTD------VVVIA 264 (569)
Q Consensus 199 ~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~~-~p~~~d------~v~l~ 264 (569)
+.+.++. ++|||||||+|+.+.+.|+|++| +|+|||+||+++ +|+.++ +|.|+
T Consensus 265 ------------p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~ 331 (612)
T 3gyr_A 265 ------------PYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAA 331 (612)
T ss_dssp ------------CEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEEC
T ss_pred ------------ceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEec
Confidence 6788876 58999999999999999999998 599999999998 677664 79999
Q ss_pred CCcEEEEEEEeCCCCceeEEEeeeccc-CCC--CCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccCCC
Q 008351 265 PGQTTDVLLKADQPVGSYYMAARAYAS-APQ--IPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSNLTGL 341 (569)
Q Consensus 265 pgeR~dv~v~~~~~~G~y~l~~~~~~~-~~~--~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l 341 (569)
|||||||+|++++.+|.++........ +.. ..........+++|......... ...+|...... ....
T Consensus 332 pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~--------~~~~ 402 (612)
T 3gyr_A 332 PAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEED-SFALPEVLSGS--------FRRM 402 (612)
T ss_dssp TTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCC-CCCCCSSCCSS--------CCCC
T ss_pred cceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCC-ccccccccccc--------cccc
Confidence 999999999999777765544332221 111 01112233456666543322110 01111110000 0000
Q ss_pred CCCCCCCCCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCCCCCCCC
Q 008351 342 TDGPHWVPVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNFPNNPP 421 (569)
Q Consensus 342 ~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~p 421 (569)
. .................. ........+.+...........+.... .........+
T Consensus 403 -----~--~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~ 458 (612)
T 3gyr_A 403 -----S--HDIPHGHRLIVLTPPGTK---------GSGGHPEIWEMAEVEDPADVQVPAEGV--------IQVTGADGRT 458 (612)
T ss_dssp -----C--TTSCCEEEEEEEECTTCT---------TTTTCCEEEEEEECC-----CCSCTTE--------EEEECTTSCE
T ss_pred -----c--cccccccccccccccccc---------cccccccccccccccccccccccccce--------eeeccCCCcc
Confidence 0 000001111110000000 000111112221111000000000000 0000000001
Q ss_pred CCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcc---------
Q 008351 422 LKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAA--------- 492 (569)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~--------- 492 (569)
..+..++. .......+.++.|++|+|+|+|.+. +.||||||||+||||+++.+.+...
T Consensus 459 ~~~~~n~~----------~~~~~~~~~~~~g~~~~w~i~N~~~---~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~ 525 (612)
T 3gyr_A 459 KTYRRTAR----------TFNDGLGFTIGEGTHEQWTFLNLSP---ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRT 525 (612)
T ss_dssp EEEEEEEC----------STTSCCCEEEETTCEEEEEEEECSS---SCEEEEESSCEEEEEEEEEEECTTEETTTTEESS
T ss_pred ccccccCc----------cCCCCcceEeCCCCEEEEEEEcCCC---CCcCEeECCCcEEEEeecCCcCcccccccccccc
Confidence 11111111 1222345678999999999999765 8999999999999999864333211
Q ss_pred ------cccccccCCCCCccceEEeCCCcEEEEEEE-eCCceeEEEeeccccccccccEEEEEEecCCC
Q 008351 493 ------RDIKKFNLVNPQRRNTIAVPVGGWAVIRFQ-ANNPGVWFVHCHLDVHLPWGLATAFVVENGPT 554 (569)
Q Consensus 493 ------~~~~~~~~~~p~~rDTv~vp~~g~~~irf~-adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 554 (569)
......+..++.|||||.|++++|++|||+ +||||.|||||||++|||.|||+.|+|.++++
T Consensus 526 ~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 526 PVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp CEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred ccccccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 012234567788999999999999999999 69999999999999999999999999987543
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=1.2e-78 Score=641.55 Aligned_cols=428 Identities=20% Similarity=0.278 Sum_probs=307.0
Q ss_pred cceEEEEEEEEEEEeccCceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccc
Q 008351 23 AAIVEHSFHVKNLTIGRLCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQC 102 (569)
Q Consensus 23 ~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~ 102 (569)
...++|+|++++..++++|+.+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.+. +||+| ||
T Consensus 15 ~~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~p---~~ 89 (488)
T 3od3_A 15 DARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPGE--VDGGP---QG 89 (488)
T ss_dssp CTTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCHH--HHCCT---TC
T ss_pred CCCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCcc--cCCCC---cC
Confidence 44578999999999999999999999999999999999999999999999999999999999999864 89997 79
Q ss_pred cCCCCCeeEEEEEeCCCCcceeEecchhhhh----c-cceeeEEEeCCCCCCCCCCC--CCCceeEEeeeeeccCHHHHH
Q 008351 103 PITPGRSYTYKFNVINQEGTLWWHGHVSLLR----A-TVYGALIIRPKSGHEYPYPK--PDKEVPILLGEWWNANVVDVE 175 (569)
Q Consensus 103 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~----~-Gl~G~liV~~~~~~~~~~~~--~d~e~~l~l~d~~~~~~~~~~ 175 (569)
+|.||++++|+|++.+++||||||||.++.+ . ||+|+|||+++++...+++. ..+|++|+|+||+++...++.
T Consensus 90 ~i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~ 169 (488)
T 3od3_A 90 IIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQID 169 (488)
T ss_dssp CBCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBC
T ss_pred cCcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCcee
Confidence 9999999999999955689999999986532 2 99999999987654433332 246899999999987543221
Q ss_pred HHHH-hcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEE-eCceeEEEEecCCCC
Q 008351 176 NQAQ-ITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKI-ANHKFTVVSVDASYT 253 (569)
Q Consensus 176 ~~~~-~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~~ 253 (569)
.... ........++.++|||+.+ |.+.+ +|++|||||||+|+.+.+.|+| +||+|+|||+||+++
T Consensus 170 ~~~~~~~~~~g~~gd~~lvNG~~~------------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l 236 (488)
T 3od3_A 170 YQLDVMTAAVGWFGDTLLTNGAIY------------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLL 236 (488)
T ss_dssp CCCSHHHHHHCCCCSEEEETTBSS------------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEE
T ss_pred ccccccccccCCCCCEEEEcCCcC------------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcc
Confidence 0000 0000123578999999943 45555 5689999999999999999999 699999999999987
Q ss_pred -CceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCC--CCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcc
Q 008351 254 -DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQ--IPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPT 330 (569)
Q Consensus 254 -~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~--~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~ 330 (569)
+|+.+++|.|+|||||||+|+++ ..+.|.+++........ ..+. ....+++...........+| .
T Consensus 237 ~~P~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~P---~------ 304 (488)
T 3od3_A 237 PEPVKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFD--KPHPVMRIQPIAISASGALP---D------ 304 (488)
T ss_dssp EEEEEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTT--SCEEEEEEEEEEEECCCCCC---S------
T ss_pred cCccEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCccccccc--CccceeEecccccCCCCCCC---c------
Confidence 89999999999999999999999 56789998765432211 1121 12334433321111111111 1
Q ss_pred ccccccccCCCCCCCCCCCCCCCCceEEEEEEecc----------------cccccc--------ccc-cc-CCCCCee-
Q 008351 331 AHKFYSNLTGLTDGPHWVPVPRQVDKHMFVTVGLA----------------LDRCAA--------NAT-CQ-GPNGQRF- 383 (569)
Q Consensus 331 ~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~----------------~~~~~~--------~~~-~~-~~~~~~~- 383 (569)
.+..+.. .+ ......++++.+.+... ...... ... +. ...+..+
T Consensus 305 ------~L~~~~~--~~-~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~ 375 (488)
T 3od3_A 305 ------TLSSLPA--LP-SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFD 375 (488)
T ss_dssp ------CCCCCCC--CC-CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGC
T ss_pred ------ccccCCC--Cc-ccccccceEEEEEecccccccccccccccccccccccccccccccccccCcccccccccccc
Confidence 1111100 00 01122345555544210 000000 000 00 0001112
Q ss_pred ---EEeecCceeecCCCchhhhhhhcccCCccCCCCCCCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEE
Q 008351 384 ---SASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNFPNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQ 460 (569)
Q Consensus 384 ---~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~ 460 (569)
.|.|||+.|.... ..+.++.|++|+|.|.
T Consensus 376 ~~~~~~ING~~~~~~~------------------------------------------------~~~~~~~G~~e~w~l~ 407 (488)
T 3od3_A 376 FHHANKINGQAFDMNK------------------------------------------------PMFAAAKGQYERWVIS 407 (488)
T ss_dssp GGGCEEETTBCCCTTC------------------------------------------------CSEECCBSSCEEEEEE
T ss_pred ccceeeECCeeCCCCC------------------------------------------------CceEcCCCCEEEEEEE
Confidence 3688887663211 2256899999999999
Q ss_pred eCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC----CceeEEEeeccc
Q 008351 461 NTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN----NPGVWFVHCHLD 536 (569)
Q Consensus 461 N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad----npG~w~~HCHil 536 (569)
|.+. .+.|||||||++|+|++++... ....++.|||||.|+ ++++.|+|++| +||.||||||++
T Consensus 408 N~~~--~~~Hp~HlHg~~F~Vl~~~g~~---------~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l 475 (488)
T 3od3_A 408 GVGD--MMLHPFHIHGTQFRILSENGKP---------PAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLL 475 (488)
T ss_dssp CTTC--CCCEEEEETTCCBEEEEBTTBC---------CCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSH
T ss_pred eCCC--CCCccEEEcCceEEEeccCCCc---------cccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCch
Confidence 9762 3799999999999999985321 112345799999999 99999999985 578999999999
Q ss_pred cccccccEEEEEE
Q 008351 537 VHLPWGLATAFVV 549 (569)
Q Consensus 537 ~H~d~GM~~~~~V 549 (569)
+|||.|||+.|+|
T Consensus 476 ~Hed~GMm~~f~V 488 (488)
T 3od3_A 476 EHEDTGMMLGFTV 488 (488)
T ss_dssp HHHHTTCEEEEEC
T ss_pred HHHhcCCcEEEEC
Confidence 9999999999986
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=4.6e-76 Score=637.17 Aligned_cols=442 Identities=19% Similarity=0.260 Sum_probs=311.8
Q ss_pred cceEEEEEEEEEEEecc--CceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCc-----------------------
Q 008351 23 AAIVEHSFHVKNLTIGR--LCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYN----------------------- 77 (569)
Q Consensus 23 ~~~~~~~l~~~~~~~~~--~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~----------------------- 77 (569)
...++|+|++++..... ++..+.+|+|||++|||+|++++||+|+|+|+|+|+..
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 44678999999998764 45689999999999999999999999999999999853
Q ss_pred ------------------eeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecchhhh----h-c
Q 008351 78 ------------------ITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLL----R-A 134 (569)
Q Consensus 78 ------------------~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~----~-~ 134 (569)
++|||||+++.+. +||++ ||+|.||++++|+|++.+++||||||||.++. . .
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 8999999999876 79986 79999999999999986689999999999873 2 3
Q ss_pred cceeeEEEeCCCCCCCCCCCCCCceeEEeeeeeccCHHH--HHHHH------Hh----cCCC----CCCCceEEEcCcCC
Q 008351 135 TVYGALIIRPKSGHEYPYPKPDKEVPILLGEWWNANVVD--VENQA------QI----TGGA----PNISDAYTINGKPG 198 (569)
Q Consensus 135 Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~--~~~~~------~~----~g~~----~~~~~~~liNG~~~ 198 (569)
||+|+|||+++++..++++.+|+|++|+|+||+++...+ +..+. .. .+.. ...++.+||||+.+
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~ 264 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC
Confidence 999999999987656666678999999999999875321 00000 00 0111 14578999999954
Q ss_pred CCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCc-------eeEEEEecCCCC-CceEee------EEEEc
Q 008351 199 DLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANH-------KFTVVSVDASYT-DPYVTD------VVVIA 264 (569)
Q Consensus 199 ~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~~-~p~~~d------~v~l~ 264 (569)
+.++|++| +|||||||+|+.+.+.|+|++| +|+|||+||+++ +|+.++ +|.|+
T Consensus 265 ------------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~ 331 (612)
T 2g23_A 265 ------------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAA 331 (612)
T ss_dssp ------------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEEC
T ss_pred ------------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEEC
Confidence 78999999 9999999999999999999999 899999999999 799999 99999
Q ss_pred CCcEEEEEEEeCCCCc-eeEEEeeecccCCCCC-C-CCcceEEEEEEc--CCCCCCCCCCCCCCCCCCCccccccccccC
Q 008351 265 PGQTTDVLLKADQPVG-SYYMAARAYASAPQIP-F-DNTTTRGIVVYD--GAASSANPLMPALPAFNDTPTAHKFYSNLT 339 (569)
Q Consensus 265 pgeR~dv~v~~~~~~G-~y~l~~~~~~~~~~~~-~-~~~~~~ail~y~--~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~ 339 (569)
|||||||+|++++.+| +|+|+........+.. . .......++++. ......+..+| ..-.. .+.
T Consensus 332 pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P---~~L~~--------~~~ 400 (612)
T 2g23_A 332 PAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALP---EVLSG--------SFR 400 (612)
T ss_dssp TTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCC---SSCCS--------SCC
T ss_pred CcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCC---hhhcc--------ccc
Confidence 9999999999998777 5888765421111100 0 000111344443 32211111122 11000 000
Q ss_pred CCCCCCCCCCCCCCCceEEEEEE---ecccccc-----------------cccc--cccCCCCCeeEEeecCceeecCCC
Q 008351 340 GLTDGPHWVPVPRQVDKHMFVTV---GLALDRC-----------------AANA--TCQGPNGQRFSASMNNHSFQFPTS 397 (569)
Q Consensus 340 ~l~~~~~~~~~p~~~d~~~~~~~---~~~~~~~-----------------~~~~--~~~~~~~~~~~~~in~~~~~~p~~ 397 (569)
.+. ...+ ..+++.+.. ..+.... +... .....+|....|.+|++.|.
T Consensus 401 ~l~-----~~~~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~---- 469 (612)
T 2g23_A 401 RMS-----HDIP--HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFN---- 469 (612)
T ss_dssp CCC-----TTSC--CEEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTT----
T ss_pred cCC-----cccc--cceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCC----
Confidence 000 0000 011111110 0000000 0000 00001122233444444331
Q ss_pred chhhhhhhcccCCccCCCCCCCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecC
Q 008351 398 LSLLQAFFFNVGGIYTPNFPNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGF 477 (569)
Q Consensus 398 ~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~ 477 (569)
....+.++.|++|+|+|.|.+. +.|||||||+
T Consensus 470 ---------------------------------------------~~~~~~v~~G~~v~w~l~N~~~---~~HPiHlHg~ 501 (612)
T 2g23_A 470 ---------------------------------------------DGLGFTIGEGTHEQWTFLNLSP---ILHPMHIHLA 501 (612)
T ss_dssp ---------------------------------------------SCCCEEEETTCEEEEEEEECSS---SCEEEEESSC
T ss_pred ---------------------------------------------CCCceEecCCCEEEEEEEeCCC---CCCCeEEcCc
Confidence 1234678999999999999764 8999999999
Q ss_pred cEEEEEeCcCcC---Ccccc------------cccccCCCCCccceEEeCCCcEEEEEEEeC-CceeEEEeecccccccc
Q 008351 478 DFHVLAQGFGNY---NAARD------------IKKFNLVNPQRRNTIAVPVGGWAVIRFQAN-NPGVWFVHCHLDVHLPW 541 (569)
Q Consensus 478 ~F~Vl~~g~g~~---~~~~~------------~~~~~~~~p~~rDTv~vp~~g~~~irf~ad-npG~w~~HCHil~H~d~ 541 (569)
.|+|++++...+ +...+ ...++..++.|||||.|+|+++++|+|+|+ |||.|||||||++|+|.
T Consensus 502 ~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~ 581 (612)
T 2g23_A 502 DFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDM 581 (612)
T ss_dssp CEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTT
T ss_pred eEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhc
Confidence 999999853222 11100 123455667799999999999999999999 99999999999999999
Q ss_pred ccEEEEEEecC
Q 008351 542 GLATAFVVENG 552 (569)
Q Consensus 542 GM~~~~~V~~~ 552 (569)
|||+.|+|.+.
T Consensus 582 GMm~~f~V~p~ 592 (612)
T 2g23_A 582 GMMRPFVVMPP 592 (612)
T ss_dssp TCEEEEEEECH
T ss_pred CCceEEEECch
Confidence 99999999754
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=4.3e-55 Score=441.32 Aligned_cols=272 Identities=28% Similarity=0.419 Sum_probs=229.8
Q ss_pred ceEEEEEEEEEEEeccC-ceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccc
Q 008351 24 AIVEHSFHVKNLTIGRL-CRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQC 102 (569)
Q Consensus 24 ~~~~~~l~~~~~~~~~~-g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~ 102 (569)
++|+|+|++++..+.+. |..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||+++.+..++||+|+++||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 47999999999998875 88999999999999999999999999999999999999999999999987789999999999
Q ss_pred cCCCCCeeEEEEEeCCCCcceeEecchhhhh----ccceeeEEEeCCCCCCCCCCCCCCceeEEeeeeeccCHHHHHHHH
Q 008351 103 PITPGRSYTYKFNVINQEGTLWWHGHVSLLR----ATVYGALIIRPKSGHEYPYPKPDKEVPILLGEWWNANVVDVENQA 178 (569)
Q Consensus 103 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~----~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 178 (569)
+|+||++++|+|++ +++||||||||...+. +||+|+|||++++....+. .+|+|++|+|+||+++.... .
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~~----~ 154 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWANK----P 154 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTTC----T
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeeccccccc----c
Confidence 99999999999999 8999999999997653 4999999999876432211 46889999999998754321 1
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCC-CceE
Q 008351 179 QITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYT-DPYV 257 (569)
Q Consensus 179 ~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-~p~~ 257 (569)
...+.....+++++|||+.+. ....+++++|++|||||+|++.. .|.|||+||.|+||+.||.++ +|..
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~---------~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~ 224 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFP---------ETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIK 224 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBT---------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEE
T ss_pred ccCCCCCCcCcEEEEcCcCCC---------CCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCcc
Confidence 111222235789999999652 23458999999999999999975 599999999999999999998 8999
Q ss_pred eeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCC
Q 008351 258 TDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAA 312 (569)
Q Consensus 258 ~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~ 312 (569)
+|++.|.||||+||+++++ +||.|++|||..............+.++|+|++..
T Consensus 225 ~dtv~l~pger~~v~~~a~-~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 225 GDTVLIGPGERYDVILNMD-NPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp ESEEEECTTCEEEEEEECC-SCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred ccEEEECCCCEEEEEEECC-CCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 9999999999999999999 79999999999766531111123568999998854
No 19
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=5.9e-54 Score=495.70 Aligned_cols=275 Identities=17% Similarity=0.221 Sum_probs=209.0
Q ss_pred HHHHHhhcccccceEEEEEEEEEEEeccC--c--------------------------eeeEEE-------EEcCC----
Q 008351 12 SVLIVSSTLASAAIVEHSFHVKNLTIGRL--C--------------------------RQRVIT-------AVNGR---- 52 (569)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--g--------------------------~~~~~~-------~~NG~---- 52 (569)
+++++++.++.+++|+|.+.|++..+... + +.+.++ .||+.
T Consensus 8 ~~~~~~~~~~~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (1065)
T 2j5w_A 8 IFLFLCSTPAWAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKP 87 (1065)
T ss_dssp ------------CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCC
T ss_pred hhHHHhccccccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccc
Confidence 33445557788999999999999985433 2 233344 57877
Q ss_pred ----CCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccC----CCCCCCCCC--cccccCCCCCeeEEEEEeCCC---
Q 008351 53 ----LPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLL----SPWADGPNM--ITQCPITPGRSYTYKFNVINQ--- 119 (569)
Q Consensus 53 ----~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~----~~~~DG~~~--~tq~~i~pG~~~~y~~~~~~~--- 119 (569)
+|||+||+++||+|+|+|+|.|+++++|||||++++. .+|+||+++ ++||+|+||++|+|+|+++++
T Consensus 88 ~w~~~PGP~Ir~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp 167 (1065)
T 2j5w_A 88 VWLGFLGPIIKAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSP 167 (1065)
T ss_dssp GGGTTSCCCEEEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSC
T ss_pred cccCCcCCeEEEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCC
Confidence 9999999999999999999999999999999999874 467788888 899999999999999999544
Q ss_pred ------CcceeEecchhhhh---ccceeeEEEeCCCCCCCCCC-CCCCceeEEeee------eeccCHHHHHHHHH-hcC
Q 008351 120 ------EGTLWWHGHVSLLR---ATVYGALIIRPKSGHEYPYP-KPDKEVPILLGE------WWNANVVDVENQAQ-ITG 182 (569)
Q Consensus 120 ------~Gt~wYH~H~~~~~---~Gl~G~liV~~~~~~~~~~~-~~d~e~~l~l~d------~~~~~~~~~~~~~~-~~g 182 (569)
+||||||||.+.++ +||+|+|||++++....|.+ .+|+|++|+|+| |+...... ... ..+
T Consensus 168 ~~~d~~aGT~wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~---~~~~~p~ 244 (1065)
T 2j5w_A 168 GEGDGNCVTRIYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIK---TYCSEPE 244 (1065)
T ss_dssp CTTSCSEEEEEEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHH---HHCSCGG
T ss_pred ccCCCCceEEEEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhh---hhhcCcc
Confidence 49999999999876 39999999999875433322 468899999994 54432111 110 000
Q ss_pred CC-------CCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCC-CeEEEEEeCceeEEEEecCCCCC
Q 008351 183 GA-------PNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALN-NQLFFKIANHKFTVVSVDASYTD 254 (569)
Q Consensus 183 ~~-------~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~ 254 (569)
.. ....+.++|||+.+ +..+.+.|++|++|||||+|+|.. ..+.|||+||+|++ +
T Consensus 245 ~~~~~~~~~~~~~~~~~iNG~~~---------~~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~ 307 (1065)
T 2j5w_A 245 KVDKDNEDFQQSNRMYSVNGYTF---------GSLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------K 307 (1065)
T ss_dssp GCCTTCHHHHHHTEEEEETTEET---------TCCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------T
T ss_pred ccccccccccccCcEEEECCccC---------CCCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------C
Confidence 00 01235799999964 234689999999999999999976 57999999999994 6
Q ss_pred ceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCC
Q 008351 255 PYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAAS 313 (569)
Q Consensus 255 p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 313 (569)
|+.+|++.|+||||+||+|+++ .+|.|+|+||...... ..+.+.++|.+...
T Consensus 308 p~~~dtv~I~pGer~dVlv~~~-~pG~y~i~~h~~~h~~------~Gm~~~~~V~~~~~ 359 (1065)
T 2j5w_A 308 NYRIDTINLFPATLFDAYMVAQ-NPGEWMLSCQNLNHLK------AGLQAFFQVQECNK 359 (1065)
T ss_dssp TEEESEEEECBTCEEEEEEECC-SCEEEEEEECSHHHHH------TTCEEEEEEECSCC
T ss_pred CeeecEEEECCCcEEEEEEEeC-CCeeEEEEecCcchhh------CCCEEEEEEecCCC
Confidence 8899999999999999999999 4899999999876433 24778899987544
No 20
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=3.1e-53 Score=432.59 Aligned_cols=272 Identities=29% Similarity=0.478 Sum_probs=227.7
Q ss_pred ceEEEEEEEEEEEeccC-ceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccc
Q 008351 24 AIVEHSFHVKNLTIGRL-CRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQC 102 (569)
Q Consensus 24 ~~~~~~l~~~~~~~~~~-g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~ 102 (569)
++++|+|++++..+.++ |+++.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||+++.+.+|+||+|+++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 47899999999999886 99999999999999999999999999999999999999999999999999899999999999
Q ss_pred cCCCCCeeEEEEEeCCCCcceeEecchhh--h-h-ccceeeEEEeCCCCCCCCCCCCCCceeEEeeeeeccCHHHHHHHH
Q 008351 103 PITPGRSYTYKFNVINQEGTLWWHGHVSL--L-R-ATVYGALIIRPKSGHEYPYPKPDKEVPILLGEWWNANVVDVENQA 178 (569)
Q Consensus 103 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~--~-~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~~ 178 (569)
+|+||++++|+|++ .++||||||||... + . .||+|++||+++.....+ ...|+|++++|+||+...... .
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~~----~ 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVADK----Y 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTTC----T
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheecccccc----c
Confidence 99999999999999 79999999999876 2 2 499999999987643222 135789999999998632110 0
Q ss_pred HhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCC-CceE
Q 008351 179 QITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYT-DPYV 257 (569)
Q Consensus 179 ~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-~p~~ 257 (569)
...+.....++.++|||+.+. ....+++++|++|||||+|++.. .|.|||+||+|+||+.||.++ .|..
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~---------~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~ 225 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFP---------LTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYY 225 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTT---------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEE
T ss_pred CCCCCCccccceEEEccccCC---------CcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcE
Confidence 011122225789999999542 23568999999999999999955 799999999999999999998 5899
Q ss_pred eeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCC
Q 008351 258 TDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAA 312 (569)
Q Consensus 258 ~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~ 312 (569)
+|++.|.||||++|+|+++ +||.|+++||....+.........+.++|+|++..
T Consensus 226 ~dtv~l~pg~r~~v~~~~~-~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 226 ADTVLVSPGERYDVIIEAD-NPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp ESEEEECTTCEEEEEEECC-SCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred EEEEEECCCCEEEEEEEeC-CCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 9999999999999999998 68999999998765321001223468999998754
No 21
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.6e-55 Score=489.10 Aligned_cols=241 Identities=17% Similarity=0.186 Sum_probs=181.9
Q ss_pred EEEEEEEEeccC-ceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCC--------c
Q 008351 29 SFHVKNLTIGRL-CRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNM--------I 99 (569)
Q Consensus 29 ~l~~~~~~~~~~-g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~--------~ 99 (569)
.+++++...... |+.+..|+ ++|||+||+++||+|+|+|+|.++++++|||||+++... +||+|. +
T Consensus 50 ~l~~~~~~~~~~~~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~~--~DG~p~~Dg~~~~~v 124 (742)
T 2r7e_A 50 TLFVEFTDHLFNIAKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWKA--SEGAEYDDQTSQREK 124 (742)
T ss_dssp CCCCCCSSSCCCCSSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCSS--SSCCCSSCSCCSSSS
T ss_pred EEEEEecceEEECCccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCcc--ccCCccCCCCccccc
Confidence 344444334443 56666554 899999999999999999999999999999999998753 566664 8
Q ss_pred ccccCCCCCeeEEEEEeCC---------CCcceeEecchhhh--hc-cceeeEEEeCCCCCCCCCCCCCCceeEEeee--
Q 008351 100 TQCPITPGRSYTYKFNVIN---------QEGTLWWHGHVSLL--RA-TVYGALIIRPKSGHEYPYPKPDKEVPILLGE-- 165 (569)
Q Consensus 100 tq~~i~pG~~~~y~~~~~~---------~~Gt~wYH~H~~~~--~~-Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d-- 165 (569)
+||+|+||++|+|+|++++ ++||||||||.+.. .. ||+|+|||+++.....+.....+|++|++++
T Consensus 125 tq~~I~PG~s~tY~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~d 204 (742)
T 2r7e_A 125 EDDKVFPGGSHTYVWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFD 204 (742)
T ss_dssp SSSSCCTTCEECCEEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCC
T ss_pred ccCcCCCCCeEEEEEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeeccc
Confidence 9999999999999999843 46999999999874 33 9999999998764322211223788888764
Q ss_pred ----eeccCHHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCC-eEEEEEeC
Q 008351 166 ----WWNANVVDVENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNN-QLFFKIAN 240 (569)
Q Consensus 166 ----~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~g 240 (569)
|+.......... ..........+.++|||+.+ ...+.+.+++|++|||||+|++... .|.|||+|
T Consensus 205 e~~~w~~~~~~~~~~~-~~~~~~~~~~~~~~ING~~~---------~~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhG 274 (742)
T 2r7e_A 205 EGKSWHSETKNSLMQD-RDAASARAWPKMHTVNGYVN---------RSLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEG 274 (742)
T ss_dssp CSSSSCCCCCC--------CCSCCCCCCCCEETTBCT---------BCCCCCEECSSSCEEEECCCCCSSSCCCCCCCTT
T ss_pred CCcccccccccccccc-CCCccccccCceEEECCccC---------CCCcceEEcCCCEEEEEEEeCCCCCcceEEEECC
Confidence 444332111100 01111122356789999954 2346789999999999999999875 68999999
Q ss_pred ceeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCC
Q 008351 241 HKFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAP 293 (569)
Q Consensus 241 h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~ 293 (569)
|.|+|++ ..+|++.|.|||+++|+++++ +||.|++|||......
T Consensus 275 h~f~Vvg--------~~~Dtv~v~Pg~~~~v~~~~~-~pG~w~~hCH~~~H~~ 318 (742)
T 2r7e_A 275 HTFLVRN--------HRQASLEISPITFLTAQTLLM-DLGQFLLFCHISSHQH 318 (742)
T ss_dssp CCCEETT--------EECCSCCCCTTCCCEEEECCC-SCSEECCCCCSSSSST
T ss_pred CEEEEEe--------EecceEEeCCCcEEEEEEEeC-CCeeEEEEeCChhHHh
Confidence 9999974 357899999999999999999 7999999999876543
No 22
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3.9e-49 Score=419.34 Aligned_cols=397 Identities=16% Similarity=0.132 Sum_probs=257.2
Q ss_pred ccceEEEEEEEEEEEeccCceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCccc
Q 008351 22 SAAIVEHSFHVKNLTIGRLCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQ 101 (569)
Q Consensus 22 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq 101 (569)
.+.++++++.++......+ ..++++||++ ||+|++++||+|+|+|+|.+...+++||||... .++
T Consensus 25 ~~~~~~~~~~~~~~~~~f~---g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~~~ 89 (447)
T 2dv6_A 25 APVVFTLRTGIAEGRMVYI---GVGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------RSA 89 (447)
T ss_dssp CCEEEEEEEEEETTEEEEE---EESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------ECC
T ss_pred CCceEEEEEEecccEEEEe---ccceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------ccc
Confidence 4456666666655444443 3567999999 999999999999999999998789999998632 257
Q ss_pred ccCCCCCeeEEEEEeCCCCcceeEecchhhhhc-cceeeEEEeCCCCCCCCC-----CCCCCceeEEeeeeeccCHHHHH
Q 008351 102 CPITPGRSYTYKFNVINQEGTLWWHGHVSLLRA-TVYGALIIRPKSGHEYPY-----PKPDKEVPILLGEWWNANVVDVE 175 (569)
Q Consensus 102 ~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~-----~~~d~e~~l~l~d~~~~~~~~~~ 175 (569)
|+|.||++++|.|++ .++||||||||..+++. ||+|.|+|+++....+.. .....+++..+ |+.......+.
T Consensus 90 ~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~ 167 (447)
T 2dv6_A 90 IVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRID 167 (447)
T ss_dssp CBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEE
T ss_pred eecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEE
Confidence 999999999999998 67999999999887776 999999999865432110 00001111100 00000000000
Q ss_pred ---H--HH-HhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCC-CCeEEEEEeCceeEEEEe
Q 008351 176 ---N--QA-QITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAAL-NNQLFFKIANHKFTVVSV 248 (569)
Q Consensus 176 ---~--~~-~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~via~ 248 (569)
. .. ...| ...+.++|||+. ..|.+++++|++|||||+|.+. ...+.+|+||. ++.
T Consensus 168 l~~~~~~~~~~~g---~~~~~~~~NG~~-----------pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~ 229 (447)
T 2dv6_A 168 LETVEVKGQLDDN---TTYTYWTFNGKV-----------PGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGP 229 (447)
T ss_dssp EEEEEEEEEEETT---EEEEEEEETTBB-----------SCCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSG
T ss_pred EEEEEEEEeccCC---ceeEEEEECCcc-----------CCCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCC
Confidence 0 00 0011 134578999982 2478999999999999999985 34577788774 368
Q ss_pred cCCCCCceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCC
Q 008351 249 DASYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAASSANPLMPALPAFNDT 328 (569)
Q Consensus 249 DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~ 328 (569)
||.+ +++.|.||||++++++++ .+|+||+|||...... . ......+.+.|.+.. .+| .....
T Consensus 230 DG~~------~~~~i~pG~~~~~~~~~~-~~G~~~yh~h~~~~~~--~-~~~Gl~g~l~v~~~~-----~~P---~~d~~ 291 (447)
T 2dv6_A 230 GGAA------AFTQTDPGEETVVTFKAL-IPGIYVYHCATPSVPT--H-ITNGMYGLLLVEPEG-----GLP---QVDRE 291 (447)
T ss_dssp GGGG------GGCCBCTTCEEEEEEECC-SCEEEEEECCSSSHHH--H-HHTTCEEEEEEECTT-----CSC---CCSEE
T ss_pred CCCC------ccEEeCCCCEEEEEEECC-CCeEEEEEeCCCChHH--H-HhCCCEEEEEEeCCC-----CCC---CCCee
Confidence 9874 234599999999999998 5799999998621100 0 011356777776532 111 11100
Q ss_pred ccccccccccCCCCCCCCCCCCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhccc
Q 008351 329 PTAHKFYSNLTGLTDGPHWVPVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNV 408 (569)
Q Consensus 329 ~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~ 408 (569)
. . ....+.. ... ........ .+..... . ......|.+||+.+...
T Consensus 292 ~-~-~~~~~~~--~~~------~~~~~g~~--~~~~~~~--------~--~~~~~~~~iNG~~~~~~------------- 336 (447)
T 2dv6_A 292 F-Y-VMQGEIY--TVK------SFGTSGEQ--EMDYEKL--------I--NEKPEYFLFNGSVGSLT------------- 336 (447)
T ss_dssp E-E-EEEEEEC--BSS------CTTCCEEC--CBBHHHH--------H--TTCCSEEEETTSTTCCC-------------
T ss_pred E-E-EEecccc--cCC------cccccccc--cCChHHh--------h--ccCCCEEEECCcccCCC-------------
Confidence 0 0 0000000 000 00000000 0000000 0 00112355555433100
Q ss_pred CCccCCCCCCCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCc
Q 008351 409 GGIYTPNFPNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGN 488 (569)
Q Consensus 409 ~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~ 488 (569)
....+.++.|++++|+|.|.+. ...||||||||+|+||+.+.+
T Consensus 337 ----------------------------------~~~~~~v~~g~~vrlrliN~~~--~~~h~~hlhGh~f~vv~~dG~- 379 (447)
T 2dv6_A 337 ----------------------------------RSHPLYASVGETVRIFFGVGGP--NFTSSFHVIGEIFDHVYSLGS- 379 (447)
T ss_dssp ----------------------------------CCCCEEECTTCEEEEEEEEEES--SCCEEEEEETCCEEEECGGGC-
T ss_pred ----------------------------------CCcceEECCCCEEEEEEEeCCC--CceEeEEEcCcEEEEEEcCCc-
Confidence 0135678999999999999753 368999999999999987422
Q ss_pred CCcccccccccCCCCC-ccceEEeCCCcEEEEEEEeCCceeEEEeeccccccccccEEEEEEecCC
Q 008351 489 YNAARDIKKFNLVNPQ-RRNTIAVPVGGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVENGP 553 (569)
Q Consensus 489 ~~~~~~~~~~~~~~p~-~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 553 (569)
+ +..|. +|||+.|++++++.|+|++||||.|+||||+++|++.||+++|.|....
T Consensus 380 ~----------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 380 V----------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPK 435 (447)
T ss_dssp S----------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCS
T ss_pred c----------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCC
Confidence 1 12344 6999999999999999999999999999999999999999999998654
No 23
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=1.3e-48 Score=389.44 Aligned_cols=248 Identities=26% Similarity=0.368 Sum_probs=212.3
Q ss_pred cceEEEEEEEEEEEeccC-ceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCccc
Q 008351 23 AAIVEHSFHVKNLTIGRL-CRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQ 101 (569)
Q Consensus 23 ~~~~~~~l~~~~~~~~~~-g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq 101 (569)
..+++|+|++++..+... |..+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||++. .++||+|+++|
T Consensus 32 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~~ 108 (288)
T 3gdc_A 32 RTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIGA 108 (288)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTSTT
T ss_pred CcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCccc
Confidence 457899999999988765 99999999999999999999999999999999999999999999973 45899999999
Q ss_pred ccCCCCCeeEEEEEeCCCCcceeEecchhh---hh-ccceeeEEEeCCCCCCCCCCCCCCceeEEeeeeeccCHHHHHHH
Q 008351 102 CPITPGRSYTYKFNVINQEGTLWWHGHVSL---LR-ATVYGALIIRPKSGHEYPYPKPDKEVPILLGEWWNANVVDVENQ 177 (569)
Q Consensus 102 ~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~~~~~ 177 (569)
|+|+||++++|+|++ +++||||||||... +. .||+|+|||+++... +..|+|++|+++||+.++
T Consensus 109 ~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~----~~~d~e~~l~~~d~~~~~------- 176 (288)
T 3gdc_A 109 GSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR----PPADDEMVMVMNGYNTDG------- 176 (288)
T ss_dssp CSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC----CCCSEEEEEEEEEECCSS-------
T ss_pred eeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC----CCCcceEEEEEeeEecCC-------
Confidence 999999999999999 89999999999974 22 399999999988643 246789999999998762
Q ss_pred HHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCC-eEEEEEeCceeEEEEecCCCC-Cc
Q 008351 178 AQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNN-QLFFKIANHKFTVVSVDASYT-DP 255 (569)
Q Consensus 178 ~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~-~p 255 (569)
| ..++.++|||+.+. ...+.++++.|++|||||+|++... .|.|||+||.|+|++ +|..+ .+
T Consensus 177 ----g---~~~~~~~iNG~~~~--------~~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~-~g~~~~~~ 240 (288)
T 3gdc_A 177 ----G---DDNEFYSVNGLPFH--------FMDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP-TGTMLTPS 240 (288)
T ss_dssp ----T---TCCSEEEETTSTTH--------HHHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE-TTCCSSCS
T ss_pred ----C---CCcceEEECccccc--------ccCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc-CCCccCCC
Confidence 1 13678999999652 0234689999999999999999654 699999999999998 55555 77
Q ss_pred eEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEE
Q 008351 256 YVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVY 308 (569)
Q Consensus 256 ~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y 308 (569)
...|++.|.||||++|+++++ .||.|.++||...... ..+.+.+++
T Consensus 241 ~~~Dtv~v~pg~~~~v~~~~~-~pG~~~~hCH~~~H~~------~GM~~~~~V 286 (288)
T 3gdc_A 241 EYTDTISQVQGQRGILELRFP-YPGKFMFHAHKTEFAE------LGWMGFFEV 286 (288)
T ss_dssp EEESEEEEETTCEEEEEECCC-SCEEEEEECSSHHHHT------TTCEEEEEE
T ss_pred ceeeEEEeCCCceEEEEEECC-CCEEEEEEecChHHHh------cCCCEEEEE
Confidence 999999999999999999999 8999999999876543 234555554
No 24
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=1.9e-48 Score=395.28 Aligned_cols=262 Identities=25% Similarity=0.322 Sum_probs=219.0
Q ss_pred cccceEEEEEEEEEEEecc-CceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC--CceeEeeecccccCCCCCCCCC
Q 008351 21 ASAAIVEHSFHVKNLTIGR-LCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESP--YNITIHWHGIFQLLSPWADGPN 97 (569)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~--~~~~iH~HG~~~~~~~~~DG~~ 97 (569)
..+++++|+|++++..+.+ +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .++++||||+.. +||++
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCC
Confidence 3478899999999999988 799999999999999999999999999999999986 589999999852 58987
Q ss_pred CcccccCCCCCeeEEEEEeCCCCcceeEecchhh---hh-ccceeeEEEeCCCCCCCCCCCCCCceeEEeeeeeccCHHH
Q 008351 98 MITQCPITPGRSYTYKFNVINQEGTLWWHGHVSL---LR-ATVYGALIIRPKSGHEYPYPKPDKEVPILLGEWWNANVVD 173 (569)
Q Consensus 98 ~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~---~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~ 173 (569)
..+ .|.||++++|+|++ .++||||||||.++ +. +||+|+|||++++. ++.+|+|++++++||++.....
T Consensus 109 ~~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 109 AAT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TTT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTT
T ss_pred cce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCccc
Confidence 644 59999999999999 78999999999753 33 39999999998652 2357899999999999865210
Q ss_pred H-------HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEE
Q 008351 174 V-------ENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVV 246 (569)
Q Consensus 174 ~-------~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~vi 246 (569)
. ..... + ..++.++|||+.+... ..+.+++++|++|||||+|+|....+.|||+||+|+||
T Consensus 182 ~~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~-------~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi 249 (327)
T 1kbv_A 182 AQGLQPFDMDKAV--A---EQPEYVVFNGHVGALT-------GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKV 249 (327)
T ss_dssp CCEEECBCHHHHH--H---TCCSEEEETTSTTTTS-------GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEE
T ss_pred cccccccChhHhc--c---CCCceEEEcCcccCCC-------CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEE
Confidence 0 01011 1 2467999999965321 12579999999999999999988889999999999999
Q ss_pred EecCCCCCceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCC
Q 008351 247 SVDASYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAA 312 (569)
Q Consensus 247 a~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~ 312 (569)
+.||.+++|+.+|++.|+||||+||+|+++ .+|.|+++||....+. .....|+|+|++..
T Consensus 250 ~~DG~~~~p~~~d~l~l~pGer~dv~v~~~-~pG~y~l~~h~~~~~~-----~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 250 YVEGGKLINENVQSTIVPAGGSAIVEFKVD-IPGNYTLVDHSIFRAF-----NKGALGQLKVEGAE 309 (327)
T ss_dssp EGGGSSCEECSBSEEEECTTEEEEEEEEEC-SCEEEEEEESSTHHHH-----HSSCEEEEEEESCC
T ss_pred EcCCCcCCCCceeEEEECCCCEEEEEEEeC-CCeEEEEEeccccccc-----cCCcEEEEEECCCC
Confidence 999999999999999999999999999999 6899999999876531 12468999998754
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=1.6e-46 Score=433.85 Aligned_cols=404 Identities=14% Similarity=0.145 Sum_probs=265.9
Q ss_pred ceeeEEEEEcCCCCC--CeEEEecCCEEEEEEEeCCCCceeEeeecccccC-CCCCCCCCCcccccCCCCCeeEEEEEeC
Q 008351 41 CRQRVITAVNGRLPG--PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLL-SPWADGPNMITQCPITPGRSYTYKFNVI 117 (569)
Q Consensus 41 g~~~~~~~~NG~~Pg--P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~-~~~~DG~~~~tq~~i~pG~~~~y~~~~~ 117 (569)
+..+.+.++||++|| |.|++++||+|+|+|.|.. +.+||||+++.+ +.|+||++.+| |+|.||.+++|+|++
T Consensus 615 ~~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~g---~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~- 689 (1065)
T 2j5w_A 615 QESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSAG---NEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP- 689 (1065)
T ss_dssp HHHTEEEEETTBCTTCCCCCEEETTCCEEEEEECCC---STTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-
T ss_pred cccceEEEEeeEecCCCCceEEeCCCEEEEEEEcCC---CcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-
Confidence 357899999999999 8899999999999999764 349999999998 99999999999 999999999999999
Q ss_pred CCCcceeEecchhhhhc-cceeeEEEeCCCCCCCCCCCCCCceeEEe----eeeeccCHHHHHHHHH-hcCCCCCCCceE
Q 008351 118 NQEGTLWWHGHVSLLRA-TVYGALIIRPKSGHEYPYPKPDKEVPILL----GEWWNANVVDVENQAQ-ITGGAPNISDAY 191 (569)
Q Consensus 118 ~~~Gt~wYH~H~~~~~~-Gl~G~liV~~~~~~~~~~~~~d~e~~l~l----~d~~~~~~~~~~~~~~-~~g~~~~~~~~~ 191 (569)
.++||||||||...++. ||.|.++|++......+...+|.|.++++ .||++.....+..... ..+.. +...
T Consensus 690 ~~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~ 766 (1065)
T 2j5w_A 690 DTEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNA 766 (1065)
T ss_dssp CSCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCT
T ss_pred CCCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---ccce
Confidence 79999999999998776 99999999987554445456788999999 8999887665433221 12221 3333
Q ss_pred EEcCcCCC---------C--C-CCCC------------CCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEE
Q 008351 192 TINGKPGD---------L--Y-PCSQ------------NPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVS 247 (569)
Q Consensus 192 liNG~~~~---------~--~-~~~~------------~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via 247 (569)
++|+.... + + +.+- .....|.|++++|+++++|+.|... ..+.+|.|| +.+..
T Consensus 767 ~~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HG--l~~~~ 843 (1065)
T 2j5w_A 767 FLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHG--VQTES 843 (1065)
T ss_dssp TTCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESS--CBCSC
T ss_pred eecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeecc--ccccC
Confidence 44443110 0 0 0110 0013489999999999999999964 446677766 34433
Q ss_pred ecCCCCCceEeeEEEEcCCcEEEEEEEeCCC---------CceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCC
Q 008351 248 VDASYTDPYVTDVVVIAPGQTTDVLLKADQP---------VGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAASSANPL 318 (569)
Q Consensus 248 ~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~---------~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~ 318 (569)
. |. ..+.|||+++..+.+.+. +|.||+|++...... . ..+..+.|.+.....
T Consensus 844 ~-~~---------~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q---~-~~GL~G~liV~~~~~----- 904 (1065)
T 2j5w_A 844 S-TV---------TPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKD---L-YSGLIGPLIVCRRPY----- 904 (1065)
T ss_dssp S-CC---------CCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHH---H-HTTCEEEEEEECCC------
T ss_pred C-CC---------ceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHh---h-hccccceeEecCccc-----
Confidence 2 21 245799998888877642 269999998532110 0 012344444433110
Q ss_pred CCCCCCCCCCccccccccccCCCCCCCCCCCCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeec-CCC
Q 008351 319 MPALPAFNDTPTAHKFYSNLTGLTDGPHWVPVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQF-PTS 397 (569)
Q Consensus 319 ~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~-p~~ 397 (569)
+. + ...+ .+..+.+.+..... +. .+....|+.+|.. |..
T Consensus 905 l~--~------------------------~~~~--~d~D~~l~~~~~d~-----------~~-~~y~~~n~~~~~~~P~~ 944 (1065)
T 2j5w_A 905 LK--V------------------------FNPR--RKLEFALLFLVFDE-----------NE-SWYLDDNIKTYSDHPEK 944 (1065)
T ss_dssp ------------------------------CCC--CEEEEEEEEEEEEG-----------GG-STTHHHHHHHHCSCGGG
T ss_pred cc--c------------------------cCCC--cceEEEEEEEeecC-----------Cc-ceeeccCcccccCCccc
Confidence 00 0 0001 12222222110000 00 0000112222211 100
Q ss_pred chhhhhhhcccCCccCCCCCCCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecC
Q 008351 398 LSLLQAFFFNVGGIYTPNFPNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGF 477 (569)
Q Consensus 398 ~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~ 477 (569)
.+++...+.. .+..+.++|. .......+.++.|++|+|+|.|.+. ..+.||||||||
T Consensus 945 v~~~~~~~~~------------~~~~~~iNG~----------~~~~~~~~~v~~G~~vr~~l~N~g~-~~~~HpfHlHG~ 1001 (1065)
T 2j5w_A 945 VNKDDEEFIE------------SNKMHAINGR----------MFGNLQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFHGH 1001 (1065)
T ss_dssp CCTTCHHHHH------------HTEEEEETTB----------CTTCCCCCEEETTCEEEEEEEECCS-TTCCEEEEESSC
T ss_pred cCcchhhhhc------------cCceEEECCc----------cCCCCccEEeCCCCEEEEEEEeCCC-CCcceeEEEccc
Confidence 1111000000 0001111221 1112345678999999999999752 247899999999
Q ss_pred cEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeCCceeEEEeeccccccccccEEEEEEecCCC
Q 008351 478 DFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVENGPT 554 (569)
Q Consensus 478 ~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 554 (569)
.|+|++++ |.+||||.|+|+++++|+|++||||.|+||||+++|++.|||++|+|.+.++
T Consensus 1002 ~F~vv~~~-----------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~~ 1061 (1065)
T 2j5w_A 1002 SFQYKHRG-----------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNED 1061 (1065)
T ss_dssp CEEETTTT-----------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC-
T ss_pred EEEEEecC-----------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCcc
Confidence 99998652 5799999999999999999999999999999999999999999999987543
No 26
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=8.9e-46 Score=366.67 Aligned_cols=239 Identities=21% Similarity=0.315 Sum_probs=200.7
Q ss_pred cccceEEEEEEEEEEEeccCceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcc
Q 008351 21 ASAAIVEHSFHVKNLTIGRLCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMIT 100 (569)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~t 100 (569)
+.+++|+|+|+|++.. .+.....++.+||++|||+||+++||+|+|+|+|.++++++|||||+++... +||++ ++
T Consensus 3 ~~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~~--~DG~~-~t 77 (276)
T 3kw8_A 3 AGGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEIS--SDGTA-MN 77 (276)
T ss_dssp -CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-TT
T ss_pred CcceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCCc--cCCCc-CC
Confidence 5688999999999853 3344456778999999999999999999999999999999999999999764 89999 89
Q ss_pred cccCCCCCeeEEEEEeCC------------CCcceeEecchhh------hh-ccceeeEEEeCCCCCCCCCCCCCCceeE
Q 008351 101 QCPITPGRSYTYKFNVIN------------QEGTLWWHGHVSL------LR-ATVYGALIIRPKSGHEYPYPKPDKEVPI 161 (569)
Q Consensus 101 q~~i~pG~~~~y~~~~~~------------~~Gt~wYH~H~~~------~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l 161 (569)
||+|.||++++|+|++++ ++||||||||.++ +. .||+|+|||+++... .+|+|++|
T Consensus 78 ~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~drE~~l 152 (276)
T 3kw8_A 78 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTI 152 (276)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEE
T ss_pred cCCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc-----ccccceEE
Confidence 999999999999999943 3799999999965 22 299999999998753 24889999
Q ss_pred EeeeeeccCHHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCc
Q 008351 162 LLGEWWNANVVDVENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANH 241 (569)
Q Consensus 162 ~l~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 241 (569)
++++ ++|||+.+ ...+.++++.|++|||||+|.+.. .|.||||||
T Consensus 153 ~l~~-------------------------~~iNG~~~---------~~~p~i~v~~G~~vri~l~N~~~~-~Hp~HlHG~ 197 (276)
T 3kw8_A 153 VFND-------------------------MTINNRKP---------HTGPDFEATVGDRVEIVMITHGEY-YHTFHMHGH 197 (276)
T ss_dssp EEET-------------------------TEETTCCT---------TCCCCEEEETTCEEEEEEEEESSC-CEEEEETTC
T ss_pred Eecc-------------------------cccceecc---------cCCCCEEEecCCEEEEEEecCCCc-ceeEEEccc
Confidence 8865 38999954 245889999999999999999974 699999999
Q ss_pred eeEEEEecCCCC----CceEeeEEEEcCCcEEEEEEEeCC--CCceeEEEeeecccCCCCCCCCcceEEEEEEcCC
Q 008351 242 KFTVVSVDASYT----DPYVTDVVVIAPGQTTDVLLKADQ--PVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGA 311 (569)
Q Consensus 242 ~~~via~DG~~~----~p~~~d~v~l~pgeR~dv~v~~~~--~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~ 311 (569)
.|++++ ||... .+..+|++.|.|||++++++++++ +||.|++|||...... ..+.+.+.+...
T Consensus 198 ~f~v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~~------~GM~g~~~V~~~ 266 (276)
T 3kw8_A 198 RWADNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSD------MGMVGLFLVKKP 266 (276)
T ss_dssp CEESSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHH------TTCEEEEEEECT
T ss_pred eeEEec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchHhh------CCCeEEEEEeCC
Confidence 999875 77543 246899999999999999999985 6999999999865432 236677777654
No 27
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=4.9e-46 Score=374.97 Aligned_cols=241 Identities=20% Similarity=0.313 Sum_probs=202.5
Q ss_pred ccccceEEEEEEEEEEEeccCce-eeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCC
Q 008351 20 LASAAIVEHSFHVKNLTIGRLCR-QRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNM 98 (569)
Q Consensus 20 ~~~~~~~~~~l~~~~~~~~~~g~-~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~ 98 (569)
.+.+.+++|+|.++. .++|. .+.++..||++|||+||+++||+|+|+|+|+++++++|||||+++... +||++
T Consensus 8 p~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~- 81 (313)
T 3tas_A 8 PAGGEVKRIKLYAER---LGGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTK- 81 (313)
T ss_dssp CCCCCEEEEEEEEEE---CGGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCST-
T ss_pred CCCceEEEEEEEEEE---cCCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCCc-
Confidence 356788999998764 34553 455677899999999999999999999999999999999999998765 79998
Q ss_pred cccccCCCCCeeEEEEEeC------------CCCcceeEecchhhhh-------ccceeeEEEeCCCCCCCCCCCCCCce
Q 008351 99 ITQCPITPGRSYTYKFNVI------------NQEGTLWWHGHVSLLR-------ATVYGALIIRPKSGHEYPYPKPDKEV 159 (569)
Q Consensus 99 ~tq~~i~pG~~~~y~~~~~------------~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~d~e~ 159 (569)
.+||+|.||++++|+|++. .++||||||||..++. .||+|+|||+++.+. .+|+|+
T Consensus 82 ~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e~ 156 (313)
T 3tas_A 82 QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRTH 156 (313)
T ss_dssp TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEEE
T ss_pred cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----cccccc
Confidence 5899999999999999862 3679999999986542 399999999988753 468999
Q ss_pred eEEeeeeeccCHHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEe
Q 008351 160 PILLGEWWNANVVDVENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIA 239 (569)
Q Consensus 160 ~l~l~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~ 239 (569)
+|+++|| ++||+.. ...+.+.++.|++|||||+|++. ..+.|||+
T Consensus 157 ~l~~~d~-------------------------t~Ng~~~---------~~~~~l~v~~Ge~vr~~liN~g~-~~hpfHlH 201 (313)
T 3tas_A 157 TIVFNDM-------------------------TINNRPA---------HTGPDFEATVGDRVEFVMITHGE-YYHTFHLH 201 (313)
T ss_dssp EEEEETT-------------------------EETTCCT---------TCCCCEEEETTCEEEEEEEEESS-CCEEEEET
T ss_pred eeeccch-------------------------hcccCCc---------ccccccccccCCEEEEEEecccc-cceeeeec
Confidence 9999876 4677754 24577999999999999999995 45999999
Q ss_pred CceeEEEEecCCCC---CceEeeEEEEcCCcEEEEEEEeCC--CCceeEEEeeecccCCCCCCCCcceEEEEEEcCCC
Q 008351 240 NHKFTVVSVDASYT---DPYVTDVVVIAPGQTTDVLLKADQ--PVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAA 312 (569)
Q Consensus 240 gh~~~via~DG~~~---~p~~~d~v~l~pgeR~dv~v~~~~--~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~ 312 (569)
||.|++++.||... .+..+|++.|.||||++++|.+.+ +||.|.+|||...... ..+.+++.++...
T Consensus 202 Gh~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~~------~GM~~~f~V~~~d 273 (313)
T 3tas_A 202 GHRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSD------MGMVGLFLVKKPD 273 (313)
T ss_dssp TCCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHH------TTCEEEEEEECTT
T ss_pred CCeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHHH------CCCeEEEEEECCC
Confidence 99999999999766 478899999999999999998764 6899999999876543 2467888887644
No 28
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=8.3e-46 Score=370.33 Aligned_cols=241 Identities=17% Similarity=0.296 Sum_probs=198.9
Q ss_pred ccccceEEEEEEEEEEEeccCceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCc
Q 008351 20 LASAAIVEHSFHVKNLTIGRLCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMI 99 (569)
Q Consensus 20 ~~~~~~~~~~l~~~~~~~~~~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~ 99 (569)
.+.+.+++|+|.+++..... ..+.++.+||++|||+||+++||+|+|+|+|+++++++|||||+++... +||++ +
T Consensus 24 ~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~~--~DG~~-~ 98 (299)
T 3t9w_A 24 RAQGTTRRITMYAEKISDEL--YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDVN--SDGTL-M 98 (299)
T ss_dssp ---CCEEEEEEEEEEEETTE--EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCCT-T
T ss_pred ccCCCEEEEEEEEEecCCCc--eeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCCc--cCCCc-c
Confidence 45788999999999765322 3345566799999999999999999999999999999999999998754 89997 8
Q ss_pred ccccCCCCCeeEEEEEeC------------CCCcceeEecchhhhh-------ccceeeEEEeCCCCCCCCCCCCCCcee
Q 008351 100 TQCPITPGRSYTYKFNVI------------NQEGTLWWHGHVSLLR-------ATVYGALIIRPKSGHEYPYPKPDKEVP 160 (569)
Q Consensus 100 tq~~i~pG~~~~y~~~~~------------~~~Gt~wYH~H~~~~~-------~Gl~G~liV~~~~~~~~~~~~~d~e~~ 160 (569)
+||+|+||++++|+|+++ .++||||||||..++. .||+|+|||+++... .+|+|++
T Consensus 99 ~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e~~ 173 (299)
T 3t9w_A 99 NGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQFT 173 (299)
T ss_dssp TTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEE
T ss_pred ccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Cccccce
Confidence 999999999999999974 2689999999986642 299999999987643 4688999
Q ss_pred EEeeeeeccCHHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeC
Q 008351 161 ILLGEWWNANVVDVENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIAN 240 (569)
Q Consensus 161 l~l~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~g 240 (569)
|++++| .+||+.. ...+.+.++.|++|||||+|++.. .++|||+|
T Consensus 174 l~~~~~-------------------------~~Ng~~~---------~~~p~l~v~~Ge~Vr~~liN~~~~-~HpfHlHG 218 (299)
T 3t9w_A 174 VVFNDM-------------------------MINNRAH---------HDAPTFEANLGERVEWIAIGHGSN-FHTFHLHG 218 (299)
T ss_dssp EEEETT-------------------------EETTCCT---------TCCCEEEEETTCEEEEEEEEESSC-CCEEEETT
T ss_pred eeeeee-------------------------eecCccc---------cccccceecCCCEEEEEEEecccc-ceeeeEec
Confidence 998654 4788844 356889999999999999999965 48999999
Q ss_pred ceeEEEEecCCCC---CceEeeEEEEcCCcEEEEEEEeCC--CCceeEEEeeecccCCCCCCCCcceEEEEEEcCC
Q 008351 241 HKFTVVSVDASYT---DPYVTDVVVIAPGQTTDVLLKADQ--PVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGA 311 (569)
Q Consensus 241 h~~~via~DG~~~---~p~~~d~v~l~pgeR~dv~v~~~~--~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~ 311 (569)
|.|+++..|+... .+..+|++.|.||||++++|.+.+ +||.|+++||...... ..+.+++.+...
T Consensus 219 h~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~~------~GM~~~f~V~~~ 288 (299)
T 3t9w_A 219 HRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHSD------MGMAGMFLVRNA 288 (299)
T ss_dssp CCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHHH------TTCEEEEEEECT
T ss_pred ceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHHh------cCCeEEEEEECC
Confidence 9999999988766 345789999999999999987653 6899999999876543 246677777654
No 29
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=1.7e-44 Score=382.76 Aligned_cols=265 Identities=20% Similarity=0.276 Sum_probs=220.0
Q ss_pred cccceEEEEEEEEEEEecc-CceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC--CceeEeeecccccCCCCCCCCC
Q 008351 21 ASAAIVEHSFHVKNLTIGR-LCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESP--YNITIHWHGIFQLLSPWADGPN 97 (569)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~--~~~~iH~HG~~~~~~~~~DG~~ 97 (569)
+.+.+++|+|++++..+.. +|..+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.. +||++
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~ 98 (442)
T 2zoo_A 24 DHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGA 98 (442)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCC
Confidence 5678899999999999885 799999999999999999999999999999999985 599999999874 48887
Q ss_pred CcccccCCCCCeeEEEEEeCCCCcceeEecchh---hhh-ccceeeEEEeCCCCCCCCCCCCCCceeEEeeeeeccCHHH
Q 008351 98 MITQCPITPGRSYTYKFNVINQEGTLWWHGHVS---LLR-ATVYGALIIRPKSGHEYPYPKPDKEVPILLGEWWNANVVD 173 (569)
Q Consensus 98 ~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~---~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~ 173 (569)
..+ +|.||++++|+|++ +++||||||||.+ .+. .||+|+|||++++.. +.+|+|++|+++||++.....
T Consensus 99 ~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~~----~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 99 ESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEGL----APVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTCC----CCCSEEEEEEEEEECBSSCTT
T ss_pred ccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCCC----CCCCceEEEEeeeeeccCccc
Confidence 654 69999999999998 8899999999853 333 399999999987532 257899999999999875310
Q ss_pred H-----HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEe
Q 008351 174 V-----ENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSV 248 (569)
Q Consensus 174 ~-----~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~ 248 (569)
. .......+ ..+++++|||+.+.. ...+.+.+++|++|||||+|+|....+.|||+||+|+||+.
T Consensus 172 ~~~~~~~~~~~~~~---~~~~~~liNG~~~~~-------~~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~ 241 (442)
T 2zoo_A 172 EAGLQPFDMAKAID---EDADYVVFNGSVGST-------TDENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYV 241 (442)
T ss_dssp CCEEECBCHHHHHT---TCCSEEEETTSTTTT-------SGGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEG
T ss_pred ccccccCChhHhcc---CCCCEEEECCCcCCC-------CCCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEec
Confidence 0 00000111 357899999995421 11357999999999999999998888999999999999999
Q ss_pred cCCCCCceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCC
Q 008351 249 DASYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAAS 313 (569)
Q Consensus 249 DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 313 (569)
||.+++|..++++.|.||||+||+|+++ .+|.|+++|+.+.... ...+.++|+|.+...
T Consensus 242 DG~~~~p~~~~~~~l~pg~r~~v~v~~~-~~G~y~~~~~~~~~~~-----~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 242 EGGSLKNHNVQTTLIPAGGAAIVEFKVE-VPGTFILVDHSIFRAF-----NKGALAMLKVEGPDD 300 (442)
T ss_dssp GGSSCEECSBSEEEECTTEEEEEEEECC-SCEEEEEEESSTHHHH-----TTSCEEEEEEESCCC
T ss_pred CCccCCCccceEEEECCCeeEEEEEEcC-CCCeEEEEeccccccc-----ccCceEEEEecCCCC
Confidence 9999999999999999999999999999 6899999999876521 124689999988653
No 30
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=3.9e-44 Score=365.43 Aligned_cols=269 Identities=19% Similarity=0.187 Sum_probs=208.8
Q ss_pred cccceEEEEEEEEEEEecc-CceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCc
Q 008351 21 ASAAIVEHSFHVKNLTIGR-LCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMI 99 (569)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~ 99 (569)
+.+++++|+|++++..+.+ +|+.+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++.....+||.+.+
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~~~ 104 (333)
T 1mzy_A 28 SGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGGGL 104 (333)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCCce
Confidence 4578999999999999887 4999999999999999999999999999999999 47899999998765445665666
Q ss_pred ccccCCCCCeeEEEEEeCCCCcceeEecchhh-----hhc-cceeeEEEeCCCCCCCC---CCCCCCceeEEeeeeeccC
Q 008351 100 TQCPITPGRSYTYKFNVINQEGTLWWHGHVSL-----LRA-TVYGALIIRPKSGHEYP---YPKPDKEVPILLGEWWNAN 170 (569)
Q Consensus 100 tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~-----~~~-Gl~G~liV~~~~~~~~~---~~~~d~e~~l~l~d~~~~~ 170 (569)
++ |.||++++|+|++ .++||||||||.++ +.. ||+|+|||++++..+.+ ...+|+|++|+++||++..
T Consensus 105 ~~--i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~~~ 181 (333)
T 1mzy_A 105 TL--INPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYIPK 181 (333)
T ss_dssp CC--BCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCB
T ss_pred eE--eCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeeccCc
Confidence 64 9999999999999 78999999999974 443 99999999976532111 1256889999999998831
Q ss_pred --HHHH---------HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEe
Q 008351 171 --VVDV---------ENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIA 239 (569)
Q Consensus 171 --~~~~---------~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~ 239 (569)
...+ ........ ....++.++|||+.+.+ ...+.++|++|++||||++|++....+ ..++
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ING~~~~~-------~~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~ 252 (333)
T 1mzy_A 182 DEDGTYMRFSDPSEGYEDMVAVM-DTLIPSHIVFNGAVGAL-------TGEGALKAKVGDNVLFVHSQPNRDSRP-HLIG 252 (333)
T ss_dssp CTTSCBCCCSSHHHHHHHHHHHH-TTTCCSEEEETTSTTTT-------SGGGCEEEETTCEEEEEEEESSSCBCE-EEET
T ss_pred cccccccccccccccccchhHHh-hccCCcEEEECCccccc-------CCCcceEecCCCEEEEEECCCCCcccc-EEEC
Confidence 1100 00000000 01357899999996532 124679999999988877766533322 3478
Q ss_pred CceeEEEEecCCCCC-ce-EeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccC-CCCCCCCcceEEEEEEcCCC
Q 008351 240 NHKFTVVSVDASYTD-PY-VTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASA-PQIPFDNTTTRGIVVYDGAA 312 (569)
Q Consensus 240 gh~~~via~DG~~~~-p~-~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~-~~~~~~~~~~~ail~y~~~~ 312 (569)
+|.++||+ ||.+++ |. .+|++.|.||||+||+|+++ .+|+|+++||..... . .++.++++|.+..
T Consensus 253 ~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~-~pG~y~~~ch~~~h~~~------~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 253 GHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFL-QPGVYAYVNHNLIEAVH------KGATAHVLVEGEW 320 (333)
T ss_dssp CCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHT------TCCEEEEEEESCC
T ss_pred CCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcC-CCEEEEEecChhhhHhh------CCCEEEEEEcCCC
Confidence 99999999 999995 44 58999999999999999999 589999999987543 2 2467999998743
No 31
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=8e-43 Score=356.39 Aligned_cols=269 Identities=21% Similarity=0.248 Sum_probs=203.1
Q ss_pred cccceEEEEEEEEEEEec--cCceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCC
Q 008351 21 ASAAIVEHSFHVKNLTIG--RLCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNM 98 (569)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~--~~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~ 98 (569)
+.+++++|+|++++..+. +||..+.+|+|||++|||+|++++||+|+|+|+|.+. ++||||+++.+..++||.+.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~---~~~~h~~~~h~~~~~~~~~~ 104 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPAT---NAMPHNVDFHGATGALGGAK 104 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTT---CCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCC---CCccccceECCCCCCCCCcc
Confidence 356789999999999865 5599999999999999999999999999999999974 35666666555555677666
Q ss_pred cccccCCCCCeeEEEEEeCCCCcceeEecchhhh----h-ccceeeEEEeCCCCCCCC---CCCCCCceeEEeeeeeccC
Q 008351 99 ITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLL----R-ATVYGALIIRPKSGHEYP---YPKPDKEVPILLGEWWNAN 170 (569)
Q Consensus 99 ~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~----~-~Gl~G~liV~~~~~~~~~---~~~~d~e~~l~l~d~~~~~ 170 (569)
+++ |.||++++|+|++ .++||||||||.++. . +||+|+|||++++....+ ...+|+|++|+++||++..
T Consensus 105 ~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~~~ 181 (336)
T 1oe1_A 105 LTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYIPK 181 (336)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECCCB
T ss_pred eEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeeecc
Confidence 665 9999999999999 789999999998752 3 399999999987542111 1246889999999998741
Q ss_pred H--HHH---------HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEE-EE
Q 008351 171 V--VDV---------ENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFF-KI 238 (569)
Q Consensus 171 ~--~~~---------~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~-~i 238 (569)
. ..+ ....... .....++.++|||+.+.+ ...+.+.|++|++||| +|++..+.+.+ .|
T Consensus 182 ~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~liNG~~~~~-------~~~~~l~v~~GervRl--in~~~~~~~~~~~i 251 (336)
T 1oe1_A 182 GPDGKYKDYATLAESYGDTVQV-MRTLTPSHIVFNGKVGAL-------TGANALTAKVGETVLL--IHSQANRDTRPHLI 251 (336)
T ss_dssp CTTSSBCCCSSTGGGHHHHHHH-HHTTCCSEEEETTSTTTT-------SGGGCEEEETTCEEEE--EEEESSSCBCEEET
T ss_pred ccCCceeecccccccccchhhH-hhcCCCCEEEECCeeccC-------CCCcceEcCCCCEEEE--EecCCCCccceEEE
Confidence 1 100 0000000 001356899999996522 1136799999997765 66665555544 45
Q ss_pred eCceeEEEEecCCCCCce--EeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCC
Q 008351 239 ANHKFTVVSVDASYTDPY--VTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAA 312 (569)
Q Consensus 239 ~gh~~~via~DG~~~~p~--~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~ 312 (569)
+||.|+|++ ||.+++|. .++++.|+||||+||+|+++ .+|.|+++||...... ...+.++++|.+..
T Consensus 252 ~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~-~pG~y~~~~h~~~~~~-----~~G~~~~~~V~~~~ 320 (336)
T 1oe1_A 252 GGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFK-QPGVYAYLNHNLIEAF-----ELGAAGHIKVEGKW 320 (336)
T ss_dssp TCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHH-----TTSCEEEEEEESCC
T ss_pred CCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcC-CCceEEEEechhhccc-----cCCCeEEEEECCCC
Confidence 999999997 99999653 46899999999999999999 5899999999864320 12467999998754
No 32
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=3.5e-43 Score=359.68 Aligned_cols=268 Identities=19% Similarity=0.225 Sum_probs=204.4
Q ss_pred cccceEEEEEEEEEEEecc--CceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCC
Q 008351 21 ASAAIVEHSFHVKNLTIGR--LCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNM 98 (569)
Q Consensus 21 ~~~~~~~~~l~~~~~~~~~--~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~ 98 (569)
+.+++++|+|++++..+.. ||+.+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++......||.+.
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~~ 110 (340)
T 2bw4_A 34 TGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGGA 110 (340)
T ss_dssp SSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCcc
Confidence 4578899999999999775 49999999999999999999999999999999998 678999998766543444445
Q ss_pred cccccCCCCCeeEEEEEeCCCCcceeEecchhh----hh-ccceeeEEEeCCCCCC----CCCCCCCCceeEEeeeeecc
Q 008351 99 ITQCPITPGRSYTYKFNVINQEGTLWWHGHVSL----LR-ATVYGALIIRPKSGHE----YPYPKPDKEVPILLGEWWNA 169 (569)
Q Consensus 99 ~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~----~~-~Gl~G~liV~~~~~~~----~~~~~~d~e~~l~l~d~~~~ 169 (569)
++| |.||++++|+|++ .++||||||||.++ +. .||+|+|||++++... .+. .+|+|++|+++||++.
T Consensus 111 ~~~--i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~~ 186 (340)
T 2bw4_A 111 LTQ--VNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYVP 186 (340)
T ss_dssp GCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECCC
T ss_pred ceE--eCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeeec
Confidence 554 9999999999999 78999999999874 33 3999999999875311 122 4688999999999973
Q ss_pred --CHHH---------HHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEE
Q 008351 170 --NVVD---------VENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKI 238 (569)
Q Consensus 170 --~~~~---------~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i 238 (569)
.... ........ .....++.++|||+.+.. ...+.+++++|+++||+++|++... +.+++
T Consensus 187 ~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~iNG~~~~~-------~~~~~l~v~~G~r~Rl~n~~~~~~~-~~~~i 257 (340)
T 2bw4_A 187 KDEAGNYKKYETPGEAYEDAVKA-MRTLTPTHIVFNGAVGAL-------TGDHALTAAVGERVLVVHSQANRDT-RPHLI 257 (340)
T ss_dssp BCTTSCBCCCCSHHHHHHHHHHH-HHTTCCSEEEETTSTTTT-------SGGGCEEEETTCEEEEEEEESSSCB-CEEEE
T ss_pred cccCCcccccccccccccchhhH-hhcCCCCEEEECCccCCc-------cCCCceEcCCCCEEEEEECCCCCcc-ceEEe
Confidence 1111 00000000 001356799999996521 1147899999998877666654332 33458
Q ss_pred eCceeEEEEecCCCC-Cce-EeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecc-cCCCCCCCCcceEEEEEEcCCC
Q 008351 239 ANHKFTVVSVDASYT-DPY-VTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYA-SAPQIPFDNTTTRGIVVYDGAA 312 (569)
Q Consensus 239 ~gh~~~via~DG~~~-~p~-~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~-~~~~~~~~~~~~~ail~y~~~~ 312 (569)
++|.|+|++ ||.++ .|. .+|++.|.||||+||+|+++ +||.|+++||... ... ..+.++++|.+..
T Consensus 258 ~gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~-~pG~y~~~~h~~~~h~~------~Gm~~~~~V~~~~ 326 (340)
T 2bw4_A 258 GGHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFR-QPGVYAYVNHNLIEAFE------LGAAGHFKVTGEW 326 (340)
T ss_dssp TCCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHT------TSCEEEEEEESCC
T ss_pred cCcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECC-CCeeeEEEcCchHHHHh------CCCEEEEEECCCC
Confidence 999999997 99988 454 58999999999999999999 5899999999873 321 2367899998744
No 33
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=1.5e-42 Score=353.18 Aligned_cols=237 Identities=20% Similarity=0.308 Sum_probs=193.2
Q ss_pred ccceEEEEEEEEEEEeccCceeeE-EEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcc
Q 008351 22 SAAIVEHSFHVKNLTIGRLCRQRV-ITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMIT 100 (569)
Q Consensus 22 ~~~~~~~~l~~~~~~~~~~g~~~~-~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~t 100 (569)
.+++++|+|++++. ++|.... .+.+||++|||+|++++||+|+|+|+|.++++++|||||+++.. ++||++ ++
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~~--~~DG~~-~t 118 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-MN 118 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-TT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccCC--cCCCcc-cc
Confidence 36779999999975 3453222 12348999999999999999999999999999999999999873 589999 89
Q ss_pred cccCCCCCeeEEEEEeCC------------CCcceeEecchhh------hhc-cceeeEEEeCCCCCCCCCCCCCCceeE
Q 008351 101 QCPITPGRSYTYKFNVIN------------QEGTLWWHGHVSL------LRA-TVYGALIIRPKSGHEYPYPKPDKEVPI 161 (569)
Q Consensus 101 q~~i~pG~~~~y~~~~~~------------~~Gt~wYH~H~~~------~~~-Gl~G~liV~~~~~~~~~~~~~d~e~~l 161 (569)
||+|.||++++|+|++.+ ++|+||||||..+ +.. ||+|++||+++... .+|+|++|
T Consensus 119 ~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l 193 (343)
T 3cg8_A 119 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTI 193 (343)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEE
T ss_pred cccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEE
Confidence 999999999999999832 3589999999742 233 99999999987643 35789998
Q ss_pred EeeeeeccCHHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCc
Q 008351 162 LLGEWWNANVVDVENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANH 241 (569)
Q Consensus 162 ~l~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh 241 (569)
+++|| +|||+.+ ...+.+.++.|++|||||+|.+. ..|.||||||
T Consensus 194 ~~~d~-------------------------~iNG~~~---------~~~~~l~v~~Ge~vri~l~N~g~-~~HpfHlHGh 238 (343)
T 3cg8_A 194 VFNDM-------------------------TINNRKP---------HTGPDFEATVGDRVEIVMITHGE-YYHTFHMHGH 238 (343)
T ss_dssp EEETT-------------------------EETTCCT---------TCCCCEEEETTCEEEEEEEEESS-CCEEEEETTC
T ss_pred Ecccc-------------------------eecccCC---------CCCccEEeCCCCEEEEEEEcCCc-cccccEecCc
Confidence 88763 7999954 23578999999999999999996 5699999999
Q ss_pred eeEEEEecCCCCC----ceEeeEEEEcCCcEEEEEEEeC--CCCceeEEEeeecccCCCCCCCCcceEEEEEEcCC
Q 008351 242 KFTVVSVDASYTD----PYVTDVVVIAPGQTTDVLLKAD--QPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGA 311 (569)
Q Consensus 242 ~~~via~DG~~~~----p~~~d~v~l~pgeR~dv~v~~~--~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~ 311 (569)
.|+|+ .||.+.. +...|++.|.|||+++|+++++ .+||.|++|||...... ..+.+++.+...
T Consensus 239 ~f~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H~~------~GM~g~~~V~~~ 307 (343)
T 3cg8_A 239 RWADN-RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSD------MGMVGLFLVKKP 307 (343)
T ss_dssp CEESS-SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHH------TTCEEEEEEECT
T ss_pred EEEEe-ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCHHHHh------ccCcEEEEEecC
Confidence 99997 4675442 4678999999999999999974 37999999999865542 246788888753
No 34
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=5.3e-41 Score=371.49 Aligned_cols=263 Identities=15% Similarity=0.174 Sum_probs=191.8
Q ss_pred ccceEEEEEEEEEEEeccC-------------c-eeeE--EEEE----------------cCCCCCCeEEEecCCEEEEE
Q 008351 22 SAAIVEHSFHVKNLTIGRL-------------C-RQRV--ITAV----------------NGRLPGPTIRVHEGDTLVVH 69 (569)
Q Consensus 22 ~~~~~~~~l~~~~~~~~~~-------------g-~~~~--~~~~----------------NG~~PgP~i~~~~Gd~v~i~ 69 (569)
.+++|+|.+-+++..+.-. | +.+. ...| ++++|||+|++++||+|+|+
T Consensus 3 ~~~~r~y~i~a~e~~w~y~~~~~~~~~~~~~~~~~y~k~v~~~ytd~~f~~~~~~~~~~~~~~~pGP~I~~~~Gd~v~v~ 82 (647)
T 1sdd_B 3 TGNRKYYYIAAEEISWDYSKFVQSDDVDYVPEDTVYKKVVFRKYLDSTFTKLDPQGEYEEHLGILGPVIRAEVDDVIQVR 82 (647)
T ss_dssp CCCEEEEEEEEEEEEEETTTTC--------CCCCEEEEEEEEEESSTTCCSBCCCCSTTGGGTTSCCCEEEETTCEEEEE
T ss_pred CCCeEEEEEEEEEEEEeCCCCCcccccCccccCCeEeEEEEEEecCCcccccccCCCcccccCCcCceEEEeCCCEEEEE
Confidence 4789999999999985333 2 1122 2233 34789999999999999999
Q ss_pred EEeCCCCceeEeeecccccCCCCCCCCCCcc--------cccCCCCCeeEEEEEeCCC-----Cc----ceeEecchhhh
Q 008351 70 VFNESPYNITIHWHGIFQLLSPWADGPNMIT--------QCPITPGRSYTYKFNVINQ-----EG----TLWWHGHVSLL 132 (569)
Q Consensus 70 l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~t--------q~~i~pG~~~~y~~~~~~~-----~G----t~wYH~H~~~~ 132 (569)
|+|.++++++|||||+++.. +|||+|+++ ||+|+||++++|+|+++++ +| |||||||.+..
T Consensus 83 ~~N~l~~~~siH~HGl~~~~--~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~G~~c~T~wYHsH~~~~ 160 (647)
T 1sdd_B 83 FKNLASRPYSLHAHGLSYEK--SSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENPGSACRAWAYYSAVNPE 160 (647)
T ss_dssp ECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTSCCSSSCSEEEEEEECCSSHH
T ss_pred EEECCCCceEEecCcceeCC--CCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCCCCCceEEEEccCCCCc
Confidence 99999999999999999975 489999876 9999999999999999654 57 99999999753
Q ss_pred h--c-cceeeEEEeCCCCCC--CCCCCCCCceeEEee------eeeccCHHHHHHHHHhcCCCCCCCceEEEcCcCCCCC
Q 008351 133 R--A-TVYGALIIRPKSGHE--YPYPKPDKEVPILLG------EWWNANVVDVENQAQITGGAPNISDAYTINGKPGDLY 201 (569)
Q Consensus 133 ~--~-Gl~G~liV~~~~~~~--~~~~~~d~e~~l~l~------d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~ 201 (569)
. . ||+|+|||+++.... ...+..++|++|+|+ ||+++.......... .......++.++|||+.+
T Consensus 161 ~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~-~~~~~~~~~~~~iNG~~~--- 236 (647)
T 1sdd_B 161 KDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRA-SSEVKNSHEFHAINGMIY--- 236 (647)
T ss_dssp HHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC----------------CCCEEEEETTBSS---
T ss_pred ccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccC-CcchhhcCceeccCCEec---
Confidence 3 3 999999999876431 112234689999999 677664322100000 011123478999999953
Q ss_pred CCCCCCCcceEEEEEcCcEEEEEEEecCCCC-eEEEEEeCceeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEeCCCCc
Q 008351 202 PCSQNPNQIYKLKVVEGKTYLLRIINAALNN-QLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKADQPVG 280 (569)
Q Consensus 202 ~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G 280 (569)
..+.+++++|++|||||+|++... .|.||||||.|+||+.|| ..+|++.|.||||+||+|+++ +||
T Consensus 237 -------~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~l~pg~r~~v~~~~~-~pG 303 (647)
T 1sdd_B 237 -------NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWPLLPGSFKTLEMKAS-KPG 303 (647)
T ss_dssp -------CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEEECTTEEEEEEEECC-SSE
T ss_pred -------CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEEECCCeEEEEEEEec-cce
Confidence 237899999999999999999764 799999999999999875 478999999999999999999 689
Q ss_pred eeEEEeeecccCCCCCCCCcceEEEEEEc
Q 008351 281 SYYMAARAYASAPQIPFDNTTTRGIVVYD 309 (569)
Q Consensus 281 ~y~l~~~~~~~~~~~~~~~~~~~ail~y~ 309 (569)
.|++|||...... .++.+++.+.
T Consensus 304 ~w~~hch~~~h~~------~Gm~~~~~V~ 326 (647)
T 1sdd_B 304 WWLLDTEVGEIQR------AGMQTPFLIV 326 (647)
T ss_dssp EEEEECCCHHHHT------TTCEEEEEEE
T ss_pred EeecccCcccccc------cccccceeee
Confidence 9999999876543 2356666664
No 35
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=1.4e-39 Score=345.75 Aligned_cols=260 Identities=23% Similarity=0.334 Sum_probs=210.5
Q ss_pred ccceEEEEEEEEEEEecc-CceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC--CceeEeeecccccCCCCCCCCCC
Q 008351 22 SAAIVEHSFHVKNLTIGR-LCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESP--YNITIHWHGIFQLLSPWADGPNM 98 (569)
Q Consensus 22 ~~~~~~~~l~~~~~~~~~-~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~--~~~~iH~HG~~~~~~~~~DG~~~ 98 (569)
.+.+++|+|++.+..... +|..+.+|+|||++|||+|++++||+++|||+|.++ ..++|||||+.. +||+|.
T Consensus 160 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~ 234 (447)
T 2dv6_A 160 QAKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAA 234 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGG
T ss_pred CCcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCc
Confidence 356678888887776666 589999999999999999999999999999999985 679999999852 599986
Q ss_pred cccccCCCCCeeEEEEEeCCCCcceeEecchh---hhh-ccceeeEEEeCCCCCCCCCCCCCCceeEEeeeeeccCHHH-
Q 008351 99 ITQCPITPGRSYTYKFNVINQEGTLWWHGHVS---LLR-ATVYGALIIRPKSGHEYPYPKPDKEVPILLGEWWNANVVD- 173 (569)
Q Consensus 99 ~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~---~~~-~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~~~- 173 (569)
.++ |.||++++|.|++ .++|+||||||.. .+. .||+|+|+|+++.. ++.+|+|++++++||++.....
T Consensus 235 ~~~--i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~ 307 (447)
T 2dv6_A 235 FTQ--TDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGT 307 (447)
T ss_dssp GCC--BCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTC
T ss_pred cEE--eCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCcccc
Confidence 554 9999999999999 7899999999974 222 39999999997642 2357889999999998653100
Q ss_pred -----H-HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEE
Q 008351 174 -----V-ENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVS 247 (569)
Q Consensus 174 -----~-~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via 247 (569)
. ..... + ..++.++|||+.+.+. ....+.+++|++|||||+|++....|+|||+||.|+||+
T Consensus 308 ~g~~~~~~~~~~--~---~~~~~~~iNG~~~~~~-------~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~ 375 (447)
T 2dv6_A 308 SGEQEMDYEKLI--N---EKPEYFLFNGSVGSLT-------RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVY 375 (447)
T ss_dssp CEECCBBHHHHH--T---TCCSEEEETTSTTCCC-------CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEEC
T ss_pred cccccCChHHhh--c---cCCCEEEECCcccCCC-------CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEE
Confidence 0 01111 1 2467899999965321 124789999999999999999878899999999999999
Q ss_pred ecCCCCC-ce-EeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCC
Q 008351 248 VDASYTD-PY-VTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAA 312 (569)
Q Consensus 248 ~DG~~~~-p~-~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~ 312 (569)
.||+++. |. .+|++.|.||||++|+|+++ +||.|++|||...... ..+.++++|.+..
T Consensus 376 ~dG~~~~~p~~~~dtv~l~pg~r~~i~~~~~-~pG~~~~hch~~~h~~------~Gm~~~~~v~~~~ 435 (447)
T 2dv6_A 376 SLGSVVSPPLIGVQTVSVPPGGATIVDFKID-RAGRYILVDHALSRLE------HGLVGFLNVDGPK 435 (447)
T ss_dssp GGGCSSSCCEEEESEEEECTTEEEEEEEECC-SCEEEEEEESSGGGGG------GTCCEEEEECSCS
T ss_pred cCCcccCCCcccccEEEECCCcEEEEEEECC-CCEEEEEEecCcCccc------cCCEEEEEEeCCC
Confidence 9999994 44 68999999999999999999 7999999999876532 2467999998743
No 36
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=1.4e-42 Score=348.87 Aligned_cols=217 Identities=18% Similarity=0.246 Sum_probs=160.5
Q ss_pred eEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCc------c--cccCCCCCeeEEEEE
Q 008351 44 RVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMI------T--QCPITPGRSYTYKFN 115 (569)
Q Consensus 44 ~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~------t--q~~i~pG~~~~y~~~ 115 (569)
++.+++| ++|||+|++++||+|+|+|+|.++++++|||||++.... +||++.. + ||+|+||++++|+|+
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~ 125 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF--SEGASYSDHTLPMEKMDDAVAPGQEYTYEWI 125 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTT--TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEE
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccc--cCCCccCCCCcccccCCCccCCCCeEEEEEE
Confidence 3445688 589999999999999999999999999999999996544 5666643 3 799999999999999
Q ss_pred eCCCC---------cceeEecchhhhh--c-cceeeEEEeCCCCCC-CC-CCCCCCceeEEeeeeeccCHHHHHHHHHhc
Q 008351 116 VINQE---------GTLWWHGHVSLLR--A-TVYGALIIRPKSGHE-YP-YPKPDKEVPILLGEWWNANVVDVENQAQIT 181 (569)
Q Consensus 116 ~~~~~---------Gt~wYH~H~~~~~--~-Gl~G~liV~~~~~~~-~~-~~~~d~e~~l~l~d~~~~~~~~~~~~~~~~ 181 (569)
+++++ ||||||||....+ . ||+|+|||+++.... .+ ....|+|++|+++||.....
T Consensus 126 ~~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~~---------- 195 (306)
T 1sdd_A 126 ISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESKS---------- 195 (306)
T ss_dssp CCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTSS----------
T ss_pred eCCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEecccccc----------
Confidence 95443 7999999987643 3 999999999874321 11 12467899999999842210
Q ss_pred CCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCC-CeEEEEEeCceeEEEEecCCCCCceEeeE
Q 008351 182 GGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALN-NQLFFKIANHKFTVVSVDASYTDPYVTDV 260 (569)
Q Consensus 182 g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~ 260 (569)
.....++.++|||+.+ ...+.+++++|++|||||+|++.. ..|.||||||.|++ || ..+|+
T Consensus 196 -~~~~~~~~~~ING~~~---------~~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dt 257 (306)
T 1sdd_A 196 -WNQTSSLMYTVNGYVN---------GTMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISA 257 (306)
T ss_dssp -SSCCCCEEECSSSCCS---------SCCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSC
T ss_pred -cccCCCcceeeCCEec---------CCCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcce
Confidence 0012467899999954 234779999999999999999987 56889999999986 76 46899
Q ss_pred EEEcCCcEEEEEEEeCCCCceeEEEeeecccC
Q 008351 261 VVIAPGQTTDVLLKADQPVGSYYMAARAYASA 292 (569)
Q Consensus 261 v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~ 292 (569)
+.|.||||+||+|+++ ++|.|+++||.....
T Consensus 258 v~l~pger~~v~~~~~-~pG~~~~hch~~~H~ 288 (306)
T 1sdd_A 258 ITLVSATSTTANMTVS-PEGRWTIASLIPRHF 288 (306)
T ss_dssp CCEETTCCBC---------CCCCCBCCSTTTG
T ss_pred EEECCCcEEEEEEEcC-CCeEEEEEeCChHHH
Confidence 9999999999999998 789999999986543
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=6.7e-41 Score=372.31 Aligned_cols=251 Identities=14% Similarity=0.124 Sum_probs=197.1
Q ss_pred ccceEEEEEEEEEEEe--ccCce---------------eeEE--EEE-----cC-----------CCCCCeEEEecCCEE
Q 008351 22 SAAIVEHSFHVKNLTI--GRLCR---------------QRVI--TAV-----NG-----------RLPGPTIRVHEGDTL 66 (569)
Q Consensus 22 ~~~~~~~~l~~~~~~~--~~~g~---------------~~~~--~~~-----NG-----------~~PgP~i~~~~Gd~v 66 (569)
.+.+|+|.|.+++..+ ++++. .+.+ +.| ++ ++|||+||+++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 6889999999999984 55543 1222 222 23 589999999999999
Q ss_pred EEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCC---------CCcceeEecchhhhh---c
Q 008351 67 VVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVIN---------QEGTLWWHGHVSLLR---A 134 (569)
Q Consensus 67 ~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~---------~~Gt~wYH~H~~~~~---~ 134 (569)
+|+|+|.++++++|||||+++..... ||+++ +||+|+||++|+|+|++++ ++||||||||.+... .
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~ 287 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHS 287 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHT
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhC
Confidence 99999999999999999999998853 69998 8999999999999999953 899999999998743 3
Q ss_pred cceeeEEEeCCCCCCC--CCCCCCCceeEEeee------eeccCHHHHHHHHHh-cC-------CCCCCCceEEEcCcCC
Q 008351 135 TVYGALIIRPKSGHEY--PYPKPDKEVPILLGE------WWNANVVDVENQAQI-TG-------GAPNISDAYTINGKPG 198 (569)
Q Consensus 135 Gl~G~liV~~~~~~~~--~~~~~d~e~~l~l~d------~~~~~~~~~~~~~~~-~g-------~~~~~~~~~liNG~~~ 198 (569)
||+|+|||+++..... .....++|++|++++ |+++.... .... .. ......+.++|||+.+
T Consensus 288 GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~---~~~~~p~~~~~~d~~~~~~~~~~~ING~~~ 364 (770)
T 2r7e_B 288 GLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENME---RNCRAPCNIQMEDPTFKENYRFHAINGYIM 364 (770)
T ss_dssp SCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGS---SCSCCSSCCCSSSSSSTTTSCEECTTSCTT
T ss_pred CceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchh---hcccCccccccCCccccccCCccccCCccC
Confidence 9999999998764321 122457899888754 44432210 0000 00 0011245689999954
Q ss_pred CCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCC-eEEEEEeCceeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEeCC
Q 008351 199 DLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNN-QLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKADQ 277 (569)
Q Consensus 199 ~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~ 277 (569)
...+.+.+++|++|||||+|++... .|.||||||.|+|++.||. .+|++.|.||||++|+|+++
T Consensus 365 ---------~~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad- 429 (770)
T 2r7e_B 365 ---------DTLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPS- 429 (770)
T ss_dssp ---------TTCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCS-
T ss_pred ---------CCCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeC-
Confidence 2346789999999999999998653 6999999999999999974 78999999999999999999
Q ss_pred CCceeEEEeeecccC
Q 008351 278 PVGSYYMAARAYASA 292 (569)
Q Consensus 278 ~~G~y~l~~~~~~~~ 292 (569)
+||.|++|||.....
T Consensus 430 ~pG~w~~hcH~~~H~ 444 (770)
T 2r7e_B 430 KAGIWRVECLIGEHL 444 (770)
T ss_dssp SCBCCCBCCCSHHHH
T ss_pred CCCceEEEecccccc
Confidence 799999999986543
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=1.6e-37 Score=344.83 Aligned_cols=218 Identities=22% Similarity=0.304 Sum_probs=169.9
Q ss_pred CCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCC-----CCCCcccccCCCCCeeEEEEEeCCCCc-----
Q 008351 52 RLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWAD-----GPNMITQCPITPGRSYTYKFNVINQEG----- 121 (569)
Q Consensus 52 ~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~D-----G~~~~tq~~i~pG~~~~y~~~~~~~~G----- 121 (569)
.+|||+||+++||+|+|+|+|.++++++|||||+++. .+|+| |+++++||+|.||++|+|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 5799999999999999999999999999999999985 45566 566788999999999999999965554
Q ss_pred ----ceeEecchhhhhc---cceeeEEEeCCCCC-CCC-CCCCCCceeEEeee------eeccCHHHHHHHHHhcC-CC-
Q 008351 122 ----TLWWHGHVSLLRA---TVYGALIIRPKSGH-EYP-YPKPDKEVPILLGE------WWNANVVDVENQAQITG-GA- 184 (569)
Q Consensus 122 ----t~wYH~H~~~~~~---Gl~G~liV~~~~~~-~~~-~~~~d~e~~l~l~d------~~~~~~~~~~~~~~~~g-~~- 184 (569)
|||||||.+.+++ ||+|+|||+++... +.. ....|+|++|++++ |++.... ....... ..
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~---~~~~~~p~~v~ 603 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENI---QRFLPNPAGVQ 603 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHH---HHHSSSSSCSC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccch---hhcccCchhcc
Confidence 9999999987643 99999999987532 111 12568999999965 4432211 1111000 00
Q ss_pred ------CCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCC-CeEEEEEeCceeEEEEecCCCCCceE
Q 008351 185 ------PNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALN-NQLFFKIANHKFTVVSVDASYTDPYV 257 (569)
Q Consensus 185 ------~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~ 257 (569)
......++|||+... ..+ +.+++|++|||||+|+|.. ..|.|||+||.|+|+ +..
T Consensus 604 ~~~~~~~~~~~~~~ING~~~~---------~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~ 665 (742)
T 2r7e_A 604 LEDPEFQASNIMHSINGYVFD---------SLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVY 665 (742)
T ss_dssp CCCHHHHGGGCCBCTTTTCSS---------CCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSS
T ss_pred cccccccccCceeeecCcCCC---------CCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccc
Confidence 001125789999541 223 8999999999999998764 458999999999986 567
Q ss_pred eeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccC
Q 008351 258 TDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASA 292 (569)
Q Consensus 258 ~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~ 292 (569)
+|++.|.||||++|+|+++ +||.|++|||..+..
T Consensus 666 ~Dtv~l~Pg~~~~v~~~ad-~pG~w~~hcH~~~H~ 699 (742)
T 2r7e_A 666 EDTLTLFPFSGETVFMSME-NPGLWILGCHNSDFR 699 (742)
T ss_dssp BCSSCCCCCSSEECCEECC-CCCCSCCEECCCSTT
T ss_pred eeEEEECCCcEEEEEEEcC-CCeEEEEEeCCchHH
Confidence 8999999999999999999 789999999997654
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.97 E-value=3.8e-30 Score=256.10 Aligned_cols=234 Identities=21% Similarity=0.217 Sum_probs=165.8
Q ss_pred CceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCCceEeeEEEEcCCc
Q 008351 188 SDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPGQ 267 (569)
Q Consensus 188 ~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pge 267 (569)
...+++||+. ..|.|+++.|+++++++.|.... .+.+|+||.. ..+.||.+-. +...|.|||
T Consensus 54 ~~~~~~ng~~-----------pgP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~~----~~~~i~PG~ 115 (288)
T 3gdc_A 54 FKGWSYNGRI-----------PGPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPGI----GAGSIAPGQ 115 (288)
T ss_dssp EEEEEETTBS-----------SCCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTTS----TTCSBCTTC
T ss_pred EEEEEECCcc-----------CCCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCCc----cceeECCCC
Confidence 4589999992 45899999999999999999854 4889999975 4678998641 234679999
Q ss_pred EEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCC
Q 008351 268 TTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSNLTGLTDGPHW 347 (569)
Q Consensus 268 R~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~ 347 (569)
+++..++++ .+|.||+|||....... . ..+..+.|.++.....
T Consensus 116 ~~~y~f~~~-~~Gt~~yH~H~~~~~~~-~--~~Gl~G~liV~~~~~~--------------------------------- 158 (288)
T 3gdc_A 116 SFTYEFDAT-PFGTHLYHCHQSPLAPH-I--AKGLYGGFIVEPKEGR--------------------------------- 158 (288)
T ss_dssp EEEEEEECC-SCEEEEEECCCSSHHHH-H--HTTCEEEEEEECSSCC---------------------------------
T ss_pred EEEEEEEcC-CCccEEEEecCcchHHH-H--hCcCeEEEEEeCCccC---------------------------------
Confidence 999999997 79999999997521000 0 0123444444331100
Q ss_pred CCCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCCCCCCCCCCccCC
Q 008351 348 VPVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNFPNNPPLKFDYT 427 (569)
Q Consensus 348 ~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~ 427 (569)
...|+++.+.+.--..+ .....-.|.+|++.|...
T Consensus 159 ----~~~d~e~~l~~~d~~~~---------~g~~~~~~~iNG~~~~~~-------------------------------- 193 (288)
T 3gdc_A 159 ----PPADDEMVMVMNGYNTD---------GGDDNEFYSVNGLPFHFM-------------------------------- 193 (288)
T ss_dssp ----CCCSEEEEEEEEEECCS---------STTCCSEEEETTSTTHHH--------------------------------
T ss_pred ----CCCcceEEEEEeeEecC---------CCCCcceEEECccccccc--------------------------------
Confidence 01234444333210000 000112567777654210
Q ss_pred CCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccc
Q 008351 428 NPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRN 507 (569)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rD 507 (569)
...+.++.|++|+|.+.|.+. ..+.||||||||.|+|++.|.. +..|.++|
T Consensus 194 ----------------~~~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~~------------~~~~~~~D 244 (288)
T 3gdc_A 194 ----------------DFPVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGTM------------LTPSEYTD 244 (288)
T ss_dssp ----------------HSCEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTCC------------SSCSEEES
T ss_pred ----------------CcccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCCc------------cCCCceee
Confidence 123577899999999999763 1246999999999999875321 23457999
Q ss_pred eEEeCCCcEEEEEEEeCCceeEEEeeccccccccccEEEEEEe
Q 008351 508 TIAVPVGGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 508 Tv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
|+.|+||++..|+|++++||.|+||||+++|++.|||+.|+|.
T Consensus 245 tv~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~ 287 (288)
T 3gdc_A 245 TISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVS 287 (288)
T ss_dssp EEEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEE
T ss_pred EEEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEe
Confidence 9999999999999999999999999999999999999999986
No 40
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.96 E-value=5.6e-29 Score=253.13 Aligned_cols=218 Identities=17% Similarity=0.199 Sum_probs=155.7
Q ss_pred cceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEeCCC----------
Q 008351 209 QIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKADQP---------- 278 (569)
Q Consensus 209 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~---------- 278 (569)
..|.|++++|+++|+||+|..... +.+|.||..+. .+.||.++. ...|.|||+++..+++++.
T Consensus 75 pGP~I~v~~Gd~v~v~~~N~l~~~-~sih~HG~~~~-~~~DG~~~t-----~~~I~PG~~~~y~f~~~~pg~~~~g~~~~ 147 (343)
T 3cg8_A 75 PGPLIEVNEGDTLHIEFTNTMDVR-ASLHVHGLDYE-ISSDGTAMN-----KSDVEPGGTRTYTWRTHKPGRRDDGTWRP 147 (343)
T ss_dssp SCCCEEEETTCEEEEEEEECSSSC-BCCEESSSBCC-GGGSCCTTT-----TCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCEEEEECCCEEEEEEEECCCCC-eeEEecCcccC-CcCCCcccc-----cccccCCCEEEEEEEeCCCCcccccccCC
Confidence 458999999999999999999654 66899998877 689999752 3457899999999998642
Q ss_pred --CceeEEEeeecccCCC--CCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCCCCCCCCC
Q 008351 279 --VGSYYMAARAYASAPQ--IPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSNLTGLTDGPHWVPVPRQV 354 (569)
Q Consensus 279 --~G~y~l~~~~~~~~~~--~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~ 354 (569)
.|.||+|+|....... .....+.+..|++..+. + ..
T Consensus 148 ~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~--------~--------------------------------~p 187 (343)
T 3cg8_A 148 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD--------V--------------------------------LP 187 (343)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC--------C--------------------------------CC
T ss_pred CCceEEEEecCccccccchhhhhcCCeEEEEEecCCC--------C--------------------------------CC
Confidence 3789999985321100 00011223233332110 0 01
Q ss_pred ceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCCCCCCCCCCccCCCCCCCCC
Q 008351 355 DKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNFPNNPPLKFDYTNPNVSNN 434 (569)
Q Consensus 355 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~ 434 (569)
|+.+.+.+. .|.+||+.+.
T Consensus 188 d~e~~l~~~--------------------d~~iNG~~~~----------------------------------------- 206 (343)
T 3cg8_A 188 DATHTIVFN--------------------DMTINNRKPH----------------------------------------- 206 (343)
T ss_dssp SEEEEEEEE--------------------TTEETTCCTT-----------------------------------------
T ss_pred CceEEEEcc--------------------cceecccCCC-----------------------------------------
Confidence 344443322 2577775431
Q ss_pred ccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCC
Q 008351 435 TSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVG 514 (569)
Q Consensus 435 ~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~ 514 (569)
....+.++.|++|+|+|.|.+. +.||||||||.|+|+.. |.+.. ....+.++||+.|+|+
T Consensus 207 --------~~~~l~v~~Ge~vri~l~N~g~---~~HpfHlHGh~f~v~~~--G~~~~-------p~~~~~~~Dtv~v~PG 266 (343)
T 3cg8_A 207 --------TGPDFEATVGDRVEIVMITHGE---YYHTFHMHGHRWADNRT--GILTG-------PDDPSRVIDNKITGPA 266 (343)
T ss_dssp --------CCCCEEEETTCEEEEEEEEESS---CCEEEEETTCCEESSSS--SSCCS-------TTCCCCEESEEEECTT
T ss_pred --------CCccEEeCCCCEEEEEEEcCCc---cccccEecCcEEEEecc--CcccC-------CCCcccceeeEEeCCC
Confidence 0134678999999999999875 89999999999999743 32221 1123568999999999
Q ss_pred cEEEEEEEe---CCceeEEEeeccccccccccEEEEEEecCCC
Q 008351 515 GWAVIRFQA---NNPGVWFVHCHLDVHLPWGLATAFVVENGPT 554 (569)
Q Consensus 515 g~~~irf~a---dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 554 (569)
+++.|+|++ +|||.|+||||+++|++.|||++|+|.+.+.
T Consensus 267 ~~~~v~~~~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~~ 309 (343)
T 3cg8_A 267 DSFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 309 (343)
T ss_dssp CEEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred CEEEEEEEECCCCCCeeEEEeCCCHHHHhccCcEEEEEecCCC
Confidence 999999995 8999999999999999999999999986543
No 41
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.96 E-value=2.7e-28 Score=248.46 Aligned_cols=246 Identities=21% Similarity=0.235 Sum_probs=160.2
Q ss_pred CceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEe---cCCCCCceEeeEEEEc
Q 008351 188 SDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSV---DASYTDPYVTDVVVIA 264 (569)
Q Consensus 188 ~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~---DG~~~~p~~~d~v~l~ 264 (569)
...+++||+ ...|.|++++|+++|+|++|..... +.+|. |-+.+... ||.+. ++...|.
T Consensus 23 ~~~~~~NG~-----------~pGP~I~v~~Gd~v~v~v~N~l~~~-~siH~--HG~~~~~~~~~DGvp~----vtq~~I~ 84 (339)
T 2zwn_A 23 YKVFGFNGQ-----------VPGPLIHVQEGDDVIVNVTNNTSLP-HTIHW--HGVHQKGTWRSDGVPG----VTQQPIE 84 (339)
T ss_dssp EEEEEETTB-----------SSCCEEEEETTCEEEEEEEEESSSC-BCCEE--ETCCCTTCGGGSCCBT----TTBCCBC
T ss_pred EEEEEECCc-----------cCCCeEEEECCCEEEEEEEECCCCC-ccEEe--CCCCcCCCcccCCCCc----cccCccC
Confidence 458999999 2358999999999999999998643 44555 45666664 99863 2335689
Q ss_pred CCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccCCCCCC
Q 008351 265 PGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSNLTGLTDG 344 (569)
Q Consensus 265 pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~ 344 (569)
||||+++.++++ .+|+||+|||....... .... ..+.+........ + +
T Consensus 85 PG~~~~y~f~~~-~~Gt~wyH~H~~~~~q~-~~~G--l~G~liV~p~~~~-----~-~---------------------- 132 (339)
T 2zwn_A 85 AGDSYTYKFKAD-RIGTLWYHCHVNVNEHV-GVRG--MWGPLIVDPKQPL-----P-I---------------------- 132 (339)
T ss_dssp TTCEEEEEEECC-SCEEEEEECCSSHHHHT-TTSC--CEEEEEEECSSCC-----T-T----------------------
T ss_pred CCCeEEEEEECC-CCEEEEEEecCCchhhh-hcCC--ceEeEEecCCCcc-----c-c----------------------
Confidence 999999999998 68999999996431100 0011 2333333221100 0 0
Q ss_pred CCCCCCCCCCceEEEEEEecccccccccccccCCCC-CeeEEeecCceeecCCCchhhhhhhcccCCccCCCCCCCCCCC
Q 008351 345 PHWVPVPRQVDKHMFVTVGLALDRCAANATCQGPNG-QRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNFPNNPPLK 423 (569)
Q Consensus 345 ~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~p~~ 423 (569)
+...|+.+.+.+.--...........+... ..-.|.+||+.+
T Consensus 133 ------~~~~d~e~~l~l~d~~~~~~~~~~~~g~~~~~~~~~~ING~~~------------------------------- 175 (339)
T 2zwn_A 133 ------EKRVTKDVIMMMSTWESAVADKYGEGGTPMNVADYFSVNAKSF------------------------------- 175 (339)
T ss_dssp ------GGGCSEEEEEEEEEECGGGTTCTTCCCSTTSCCCEEEETTBCT-------------------------------
T ss_pred ------cccCCceEEEEeeheecccccccCCCCCCccccceEEEccccC-------------------------------
Confidence 001123322222100000000000000000 011344554322
Q ss_pred ccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCC
Q 008351 424 FDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNP 503 (569)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p 503 (569)
.....+.++.|++++|.|.|.+. ..||||||||+|+|++.... ...+|
T Consensus 176 ------------------~~~~~~~v~~G~~vrlrliN~~~---~~h~~hlhGh~f~vi~~DG~-----------~~~~p 223 (339)
T 2zwn_A 176 ------------------PLTQPLRVKKGDVVKIRFFGAGG---GIHAMHSHGHDMLVTHKDGL-----------PLDSP 223 (339)
T ss_dssp ------------------TSSCCEEECTTCEEEEEEEECSS---SCEEEEETTCCEEEEEETTE-----------EEEEE
T ss_pred ------------------CCcccEEECCCCEEEEEEEeCCC---ceEEEEECCcEEEEEEeCCe-----------ecCCC
Confidence 11134678899999999999874 69999999999999998422 11236
Q ss_pred CccceEEeCCCcEEEEEEEeCCceeEEEeeccccc------cccccEEEEEEecC
Q 008351 504 QRRNTIAVPVGGWAVIRFQANNPGVWFVHCHLDVH------LPWGLATAFVVENG 552 (569)
Q Consensus 504 ~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H------~d~GM~~~~~V~~~ 552 (569)
.++||+.|+||+++.|+|++|+||.|++|||+++| ++.||++++.+...
T Consensus 224 ~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~ 278 (339)
T 2zwn_A 224 YYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGV 278 (339)
T ss_dssp EEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTS
T ss_pred cEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECCC
Confidence 78999999999999999999999999999999999 88999999998653
No 42
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.96 E-value=1.8e-28 Score=246.99 Aligned_cols=247 Identities=19% Similarity=0.254 Sum_probs=165.4
Q ss_pred ceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEE-EEecCCCCCceEeeEEEEcCCc
Q 008351 189 DAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTV-VSVDASYTDPYVTDVVVIAPGQ 267 (569)
Q Consensus 189 ~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~v~l~pge 267 (569)
..+++||+ -..|.|+++.|+++++|+.|.... .+.+|+||....- .+.||.+-. ....|.|||
T Consensus 23 ~~~~~ng~-----------~pGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~~----t~~~i~PG~ 86 (318)
T 3g5w_A 23 HTFAFNGQ-----------VPAPLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPHA----TQHAIEPGD 86 (318)
T ss_dssp EEEEETTB-----------SSCCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBTT----TBCCBCTTC
T ss_pred EEEEECCc-----------cCCceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCccc----ccccCCCCC
Confidence 58999998 245899999999999999999854 4789999876543 368998641 234689999
Q ss_pred EEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCC
Q 008351 268 TTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSNLTGLTDGPHW 347 (569)
Q Consensus 268 R~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~ 347 (569)
+++..++++ .+|+||+|||....... ... +..+.|.+...... +
T Consensus 87 ~~~y~f~~~-~~Gt~wYH~H~~~~~~~-~~~--Gl~G~lIV~~~~~~-----~--------------------------- 130 (318)
T 3g5w_A 87 TFTYKFKAE-PAGTMWYHCHVNVNEHV-TMR--GMWGPLIVEPKNPL-----P--------------------------- 130 (318)
T ss_dssp EEEEEEECC-SCEEEEEECCSSHHHHH-HHS--CCEEEEEEECSSCC-----H---------------------------
T ss_pred EEEEEEEcC-CCEEEEEEccCChhhhh-ccC--CCEEEEEEcCCCcc-----c---------------------------
Confidence 999999998 78999999997321100 001 23344444331100 0
Q ss_pred CCCCCCCceEEEEEEeccccccccccccc--CCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCCCCCCCCCCcc
Q 008351 348 VPVPRQVDKHMFVTVGLALDRCAANATCQ--GPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNFPNNPPLKFD 425 (569)
Q Consensus 348 ~~~p~~~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~ 425 (569)
.+...|+.+.+.+.--..... ..... ......-.|.+||+.|.
T Consensus 131 --~~~~~d~e~~l~l~dw~~~~~-~~~~~~~~~~~~~d~~~ING~~~~-------------------------------- 175 (318)
T 3g5w_A 131 --IEKTVTKDYILMLSDWVSSWA-NKPGEGGIPGDVFDYYTINAKSFP-------------------------------- 175 (318)
T ss_dssp --HHHTCCEEEEEEEEEECGGGT-TCTTCCCCTTCCCCEEEETTBCBT--------------------------------
T ss_pred --ccccccceeEEEEEeeccccc-cccccCCCCCCcCcEEEEcCcCCC--------------------------------
Confidence 000122333222210000000 00000 00000113566665431
Q ss_pred CCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCc
Q 008351 426 YTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQR 505 (569)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~ 505 (569)
.+..+.++.|++++|+|.|.+. ..||||||||.|+|++...+ .+.+|.+
T Consensus 176 -----------------~~~~l~v~~G~~vrlrliN~~~---~~h~~hlhGh~f~vi~~dG~-----------~~~~p~~ 224 (318)
T 3g5w_A 176 -----------------ETQPIRVKKGDVIRLRLIGAGD---HVHAIHTHGHISQIAFKDGF-----------PLDKPIK 224 (318)
T ss_dssp -----------------SSCCEEECTTCEEEEEEEECSS---SCEEEEETTSCEEEEEETTE-----------EEEEEEE
T ss_pred -----------------CCccEEeCCCCEEEEEEEeCCC---ceEEEEECCcEEEEEecCCc-----------ccCCCcc
Confidence 1133678999999999999864 68999999999999998422 1124678
Q ss_pred cceEEeCCCcEEEEEEEeCCceeEEEeeccccccc------cccEEEEEEecCC
Q 008351 506 RNTIAVPVGGWAVIRFQANNPGVWFVHCHLDVHLP------WGLATAFVVENGP 553 (569)
Q Consensus 506 rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d------~GM~~~~~V~~~~ 553 (569)
+||+.|+||+++.|+|+++|||.|+||||+++|++ .|||..++|...+
T Consensus 225 ~dtv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 225 GDTVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp ESEEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred ccEEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 99999999999999999999999999999999998 6899999997644
No 43
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.95 E-value=3e-28 Score=240.90 Aligned_cols=219 Identities=16% Similarity=0.204 Sum_probs=157.8
Q ss_pred cceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEeCC-----------
Q 008351 209 QIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKADQ----------- 277 (569)
Q Consensus 209 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~----------- 277 (569)
..|.|+++.|+++++++.|... ..+.+|.||..+.. ..||.++ ..-.|.||+++...+++++
T Consensus 34 pGP~i~~~~Gd~v~v~~~N~~~-~~~siH~HG~~~~~-~~DG~~~-----t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~ 106 (276)
T 3kw8_A 34 PGPLIEVNEGDTLHIEFTNTMD-VRASLHVHGLDYEI-SSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 106 (276)
T ss_dssp SCCCEEEETTCEEEEEEEECSS-SCBCCEESSSBCCG-GGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCC-CCccEeecCcccCC-ccCCCcC-----CcCCCCCCCEEEEEEEcCCccccccCccCC
Confidence 5699999999999999999974 45789999987654 5899873 2235789999999999975
Q ss_pred -CCceeEEEeeecccCC-CCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCCCCCCCCCc
Q 008351 278 -PVGSYYMAARAYASAP-QIPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSNLTGLTDGPHWVPVPRQVD 355 (569)
Q Consensus 278 -~~G~y~l~~~~~~~~~-~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d 355 (569)
.+|.||+|||...... ..+. .....+.|....... + ..|
T Consensus 107 ~~~gt~~YH~h~~~~~~~~~~~-~~Gl~G~liV~~~~~------~--------------------------------~~d 147 (276)
T 3kw8_A 107 GSAGYWHYHDHVVGTEHGTGGI-RNGLYGPVIVRRKGD------V--------------------------------LPD 147 (276)
T ss_dssp CSCEEEEEECSSSSSTTCHHHH-HHTCEEEEEEECTTC------C--------------------------------CCS
T ss_pred CCCEEEEEecCccccccchhhh-hCccEEEEEEecCCC------c--------------------------------ccc
Confidence 2589999999743110 0000 012333443332110 0 014
Q ss_pred eEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCCCCCCCCCCccCCCCCCCCCc
Q 008351 356 KHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNFPNNPPLKFDYTNPNVSNNT 435 (569)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 435 (569)
+++.+.+. .|.|||+.|.
T Consensus 148 rE~~l~l~--------------------~~~iNG~~~~------------------------------------------ 165 (276)
T 3kw8_A 148 ATHTIVFN--------------------DMTINNRKPH------------------------------------------ 165 (276)
T ss_dssp EEEEEEEE--------------------TTEETTCCTT------------------------------------------
T ss_pred cceEEEec--------------------ccccceeccc------------------------------------------
Confidence 55554332 2578876441
Q ss_pred cccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCc
Q 008351 436 SLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGG 515 (569)
Q Consensus 436 ~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g 515 (569)
....+.++.|++|+|+|.|.+. +.|||||||+.|+|++.| .++. ....+.++||+.|+|++
T Consensus 166 -------~~p~i~v~~G~~vri~l~N~~~---~~Hp~HlHG~~f~v~~~G--~~~~-------p~~~~~~~Dtv~v~pg~ 226 (276)
T 3kw8_A 166 -------TGPDFEATVGDRVEIVMITHGE---YYHTFHMHGHRWADNRTG--ILTG-------PDDPSRVIDNKITGPAD 226 (276)
T ss_dssp -------CCCCEEEETTCEEEEEEEEESS---CCEEEEETTCCEESSSSS--SCCS-------TTCCCCEESEEEECTTC
T ss_pred -------CCCCEEEecCCEEEEEEecCCC---cceeEEEccceeEEeccC--ccCC-------CcccccCCccEEeCCCc
Confidence 0134678999999999999764 799999999999997543 2221 01234689999999999
Q ss_pred EEEEEEEeC---CceeEEEeeccccccccccEEEEEEecCCC
Q 008351 516 WAVIRFQAN---NPGVWFVHCHLDVHLPWGLATAFVVENGPT 554 (569)
Q Consensus 516 ~~~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~~~~~ 554 (569)
+..++|+++ |||.|+||||+++|++.|||+.|+|.+.++
T Consensus 227 ~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 227 SFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp EEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eEEEEEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 999999997 899999999999999999999999987654
No 44
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.95 E-value=2.4e-28 Score=243.96 Aligned_cols=218 Identities=19% Similarity=0.258 Sum_probs=152.3
Q ss_pred cceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEeCC-----------
Q 008351 209 QIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKADQ----------- 277 (569)
Q Consensus 209 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~----------- 277 (569)
..|+|+++.|++++++|.|.... ...+|.||..+. -+.||.++.. -.|.|||+++..+++.+
T Consensus 56 PGP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~-~~~DG~~~~~-----~~i~PG~t~~Y~~~~~~~~~~~~~~~~~ 128 (299)
T 3t9w_A 56 PGPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYD-VNSDGTLMNG-----SAVMPGQTRRYTWRSHVGYRRADGSWAE 128 (299)
T ss_dssp SCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCC-GGGSCCTTTT-----CCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCceEEEECCeEEEEEEEECCCC-CccEEeCCcccC-CccCCCcccc-----CccCCCCeEEEEEEeecccccCCCcCCC
Confidence 46899999999999999999754 478899987655 3679986521 13689999999988752
Q ss_pred -CCceeEEEeeecccCCCC-CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCCCCCCCCCc
Q 008351 278 -PVGSYYMAARAYASAPQI-PFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSNLTGLTDGPHWVPVPRQVD 355 (569)
Q Consensus 278 -~~G~y~l~~~~~~~~~~~-~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d 355 (569)
.+|.||+|||........ +. .....+.|....... ...|
T Consensus 129 ~~~gt~~YH~H~~~~~~~~~~~-~~GL~G~liV~~~~~--------------------------------------~~~d 169 (299)
T 3t9w_A 129 GTAGYWHYHDHAMGTEHGTEGV-LKGLYGALVVRRQGD--------------------------------------LLPK 169 (299)
T ss_dssp CCCEEEEEECSSSSSTTCHHHH-HHTCEEEEEEECTTC--------------------------------------CCCS
T ss_pred CCceeEEEecCCcccccchhhh-cccccceEEEecccc--------------------------------------cCcc
Confidence 469999999864321100 00 012334443332100 0124
Q ss_pred eEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCCCCCCCCCCccCCCCCCCCCc
Q 008351 356 KHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNFPNNPPLKFDYTNPNVSNNT 435 (569)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 435 (569)
+.+.+.+. .|.+|++.+
T Consensus 170 ~e~~l~~~--------------------~~~~Ng~~~------------------------------------------- 186 (299)
T 3t9w_A 170 RQFTVVFN--------------------DMMINNRAH------------------------------------------- 186 (299)
T ss_dssp EEEEEEEE--------------------TTEETTCCT-------------------------------------------
T ss_pred ccceeeee--------------------eeeecCccc-------------------------------------------
Confidence 55544332 245555422
Q ss_pred cccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCc
Q 008351 436 SLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGG 515 (569)
Q Consensus 436 ~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g 515 (569)
.....+.++.|++|+|+|.|.+. +.||||||||.|+|+..+... .....+.++||+.|.|+.
T Consensus 187 ------~~~p~l~v~~Ge~Vr~~liN~~~---~~HpfHlHGh~F~v~~~g~~~---------~~~~~~~~~Dtv~v~PGe 248 (299)
T 3t9w_A 187 ------HDAPTFEANLGERVEWIAIGHGS---NFHTFHLHGHRWLDNRTGMRT---------SEYDPSPLIDIKDLNPGV 248 (299)
T ss_dssp ------TCCCEEEEETTCEEEEEEEEESS---CCCEEEETTCCEESSSSSSCC---------STTCCCCEESEEECCTTC
T ss_pred ------cccccceecCCCEEEEEEEeccc---cceeeeEecceEEEEeccccc---------CCcCCCCceeeEEeCCce
Confidence 11245678999999999999765 789999999999998765322 122345689999999996
Q ss_pred EE---EEEEEeCCceeEEEeeccccccccccEEEEEEecCC
Q 008351 516 WA---VIRFQANNPGVWFVHCHLDVHLPWGLATAFVVENGP 553 (569)
Q Consensus 516 ~~---~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 553 (569)
.. +++|+++|||.|+||||+++|++.|||++|+|.+.+
T Consensus 249 ~~~~~via~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 249 SFGFQVIAGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp EEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred eEEEEEEEeeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCC
Confidence 55 455567899999999999999999999999998754
No 45
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.94 E-value=6.9e-27 Score=235.26 Aligned_cols=219 Identities=15% Similarity=0.188 Sum_probs=153.1
Q ss_pred cceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEeC------------
Q 008351 209 QIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKAD------------ 276 (569)
Q Consensus 209 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~------------ 276 (569)
..|.|+++.|++++++|.|.... ...+|.||..+.- +.||.+..- -.|.|||+++..+++.
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~-~~dG~~~~~-----~~i~PG~~~~Y~~~~~~P~~~~~~~~~~ 112 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMDV-PVSLHVHGLDYEI-SSDGTKQSR-----SDVEPGGTRTYTWRTHVPGRRADGTWRA 112 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCSTTTT-----CCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCCC-CccEeecCCcCCc-cCCCCcccc-----CCcCCCCEEEEEEEeccCCccccccccC
Confidence 45899999999999999999754 4788999876543 578876521 1378999999888764
Q ss_pred CCCceeEEEeeecccCCCC-CCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCCCCCCCCCc
Q 008351 277 QPVGSYYMAARAYASAPQI-PFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSNLTGLTDGPHWVPVPRQVD 355 (569)
Q Consensus 277 ~~~G~y~l~~~~~~~~~~~-~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d 355 (569)
+..|.||+|||........ .. .....+.|....... ...|
T Consensus 113 ~~~gt~~YH~h~~~~~~~~~~~-~~Gl~G~liV~~~~~--------------------------------------~~~d 153 (313)
T 3tas_A 113 GSAGYWHYHDHVVGTEHGTGGI-RNGLYGPVIVRRKGD--------------------------------------VLPD 153 (313)
T ss_dssp CSCEEEEEECSSSSSTTCHHHH-HHTCEEEEEEECTTC--------------------------------------BCCS
T ss_pred CCceEEEEeecCcccccchhhh-hccccCceEeecccc--------------------------------------cccc
Confidence 2458999999974321100 00 012334443332100 0124
Q ss_pred eEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCCCCCCCCCCccCCCCCCCCCc
Q 008351 356 KHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNFPNNPPLKFDYTNPNVSNNT 435 (569)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 435 (569)
+.+.+.+. .|.+|+..+.
T Consensus 154 ~e~~l~~~--------------------d~t~Ng~~~~------------------------------------------ 171 (313)
T 3tas_A 154 RTHTIVFN--------------------DMTINNRPAH------------------------------------------ 171 (313)
T ss_dssp EEEEEEEE--------------------TTEETTCCTT------------------------------------------
T ss_pred ccceeecc--------------------chhcccCCcc------------------------------------------
Confidence 55554432 2456554221
Q ss_pred cccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCc
Q 008351 436 SLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGG 515 (569)
Q Consensus 436 ~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g 515 (569)
....+.++.|++|+|+|.|.+. +.||||||||.|+|+..+.. ......+.++||+.|.|++
T Consensus 172 -------~~~~l~v~~Ge~vr~~liN~g~---~~hpfHlHGh~F~v~~~~~~---------~~~~~~~~~~Dtv~l~Pge 232 (313)
T 3tas_A 172 -------TGPDFEATVGDRVEFVMITHGE---YYHTFHLHGHRWADNRTGML---------TGPDDPSQVIDNKICGPAD 232 (313)
T ss_dssp -------CCCCEEEETTCEEEEEEEEESS---CCEEEEETTCCEESSTTSSC---------CSTTCCCCEESEEEECTTC
T ss_pred -------cccccccccCCEEEEEEecccc---cceeeeecCCeeEEEEECCc---------cCCCCCCeeeeEEEeCCCc
Confidence 1133578899999999999875 79999999999999876432 1122456799999999999
Q ss_pred EEEEEEE---eCCceeEEEeeccccccccccEEEEEEecCCC
Q 008351 516 WAVIRFQ---ANNPGVWFVHCHLDVHLPWGLATAFVVENGPT 554 (569)
Q Consensus 516 ~~~irf~---adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 554 (569)
...+++. ++|||.|+||||+++|++.|||++|+|.+.+.
T Consensus 233 r~~v~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~ 274 (313)
T 3tas_A 233 SFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 274 (313)
T ss_dssp EEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTC
T ss_pred ceEEEEEeccCCCCEeEEEEeCChHHHHCCCeEEEEEECCCC
Confidence 8877776 46999999999999999999999999987654
No 46
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.90 E-value=2.2e-25 Score=223.74 Aligned_cols=236 Identities=11% Similarity=0.068 Sum_probs=134.9
Q ss_pred EEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCC----ceEeeEEEEcCC
Q 008351 191 YTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTD----PYVTDVVVIAPG 266 (569)
Q Consensus 191 ~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~----p~~~d~v~l~pg 266 (569)
.++||.+| |.|++++|+++++||.|... ..+.+|.||..+.. +.||.+.. ++.++...|.||
T Consensus 52 ~~~n~~pG------------P~I~v~~Gd~v~v~~~N~l~-~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG 117 (306)
T 1sdd_A 52 SRTSGLLG------------PTLYAEVGDIMKVHFKNKAH-KPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPG 117 (306)
T ss_dssp CSSCCSCC------------CCEEEETTCEEEEEEEECSS-SCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTT
T ss_pred cccCCccC------------CEEEEeCCCEEEEEEEECCC-CcccEeecceeccc-ccCCCccCCCCcccccCCCccCCC
Confidence 45787754 89999999999999999874 55788888877432 68998752 223335678999
Q ss_pred cEEEEEEEeCCCC---------ceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccc
Q 008351 267 QTTDVLLKADQPV---------GSYYMAARAYASAPQIPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSN 337 (569)
Q Consensus 267 eR~dv~v~~~~~~---------G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~ 337 (569)
||++..+++++.+ |+||+|+|.....+ ....+.+ +++.+....... .+..+.
T Consensus 118 ~~~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q--~~~GL~G-~liV~~~~~~~~---~~~~~~------------- 178 (306)
T 1sdd_A 118 QEYTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVED--FNSGLIG-PLLICKKGTLTE---DGTQKM------------- 178 (306)
T ss_dssp CEEEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHH--HHTTCCE-EEEEECTTCBCT---TSSBSS-------------
T ss_pred CeEEEEEEeCCccCCCCCCCCceEEEEeccCCchhh--hccCceE-EEEEccCCCCCc---cCCcCc-------------
Confidence 9999999997543 69999999532110 0112222 444443211100 000000
Q ss_pred cCCCCCCCCCCCCCCCCceEEEEEEe-cccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCCC
Q 008351 338 LTGLTDGPHWVPVPRQVDKHMFVTVG-LALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNF 416 (569)
Q Consensus 338 l~~l~~~~~~~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~ 416 (569)
.|+.+.+.+. +... .... ......+.+||+.+.
T Consensus 179 ----------------~d~e~~l~~~d~d~~----~~~~---~~~~~~~~ING~~~~----------------------- 212 (306)
T 1sdd_A 179 ----------------FEKQHVLMFAVFDES----KSWN---QTSSLMYTVNGYVNG----------------------- 212 (306)
T ss_dssp ----------------SCCCCCCBCCEEETT----SSSS---CCCCEEECSSSCCSS-----------------------
T ss_pred ----------------ccceEEEEEEecccc----cccc---cCCCcceeeCCEecC-----------------------
Confidence 0000000000 0000 0000 000113556654331
Q ss_pred CCCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccc
Q 008351 417 PNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIK 496 (569)
Q Consensus 417 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~ 496 (569)
..+.+.++.|++++|.|.|.+. ....||||+|||.|++- |
T Consensus 213 --------------------------~~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~d----G--------- 252 (306)
T 1sdd_A 213 --------------------------TMPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQN----H--------- 252 (306)
T ss_dssp --------------------------CCCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEET----T---------
T ss_pred --------------------------CCcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeeeC----C---------
Confidence 0022456789999999999764 22579999999999861 1
Q ss_pred cccCCCCCccceEEeCCCcEEEEEEEeCCceeEEEeeccccccccccEEEEEEecC
Q 008351 497 KFNLVNPQRRNTIAVPVGGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVENG 552 (569)
Q Consensus 497 ~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 552 (569)
.++||+.|.||+.+.|+|++++||.|+||||+++|++.|||+.|+|.+.
T Consensus 253 -------~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 253 -------HKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp -------EECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred -------EEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 2589999999999999999999999999999999999999999999754
No 47
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.88 E-value=1.8e-22 Score=223.17 Aligned_cols=238 Identities=11% Similarity=0.154 Sum_probs=143.4
Q ss_pred cceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCC---c-eEeeEEEEcCCcEEEEEEEeCCC-----C
Q 008351 209 QIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTD---P-YVTDVVVIAPGQTTDVLLKADQP-----V 279 (569)
Q Consensus 209 ~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~---p-~~~d~v~l~pgeR~dv~v~~~~~-----~ 279 (569)
..|+|++++|+++++||.|.... .+.+|.||.... .+.||.+.. | ..+....|.|||+++..+++++. +
T Consensus 67 pGP~I~~~~Gd~v~v~~~N~l~~-~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~ 144 (647)
T 1sdd_B 67 LGPVIRAEVDDVIQVRFKNLASR-PYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENP 144 (647)
T ss_dssp SCCCEEEETTCEEEEEECCCSSS-CBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSS
T ss_pred cCceEEEeCCCEEEEEEEECCCC-ceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCC
Confidence 34899999999999999999854 478888887764 578998642 2 22345679999999999999864 5
Q ss_pred c----eeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCCCCCCCCCCc
Q 008351 280 G----SYYMAARAYASAPQIPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSNLTGLTDGPHWVPVPRQVD 355 (569)
Q Consensus 280 G----~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~~~~~p~~~d 355 (569)
| +||+|+|.....+ ....+.+ ++|......... .+..|. .+
T Consensus 145 G~~c~T~wYHsH~~~~~q--~~~GL~G-~lIV~~~~~~~~---~~~~~~-----------------------------~~ 189 (647)
T 1sdd_B 145 GSACRAWAYYSAVNPEKD--IHSGLIG-PLLICRKGTLDK---ETNMPV-----------------------------DM 189 (647)
T ss_dssp SCSEEEEEEECCSSHHHH--HTTTCEE-EEEEECTTSSCT---TSCCCS-----------------------------SC
T ss_pred CCCceEEEEccCCCCccc--ccccCcc-CEEEeeCCCccc---ccCCCC-----------------------------cc
Confidence 7 9999999842111 0112222 333332211100 000000 01
Q ss_pred eEEEEEEe-cccccc-cccc-c-------ccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCCCCCCCCCCcc
Q 008351 356 KHMFVTVG-LALDRC-AANA-T-------CQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNFPNNPPLKFD 425 (569)
Q Consensus 356 ~~~~~~~~-~~~~~~-~~~~-~-------~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~ 425 (569)
+.+.+.+. +..... ..+. . ..........+.+||+.+
T Consensus 190 ~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~--------------------------------- 236 (647)
T 1sdd_B 190 REFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIY--------------------------------- 236 (647)
T ss_dssp CEEEEEEEEEEGGGSSCCC---------------CCCEEEEETTBSS---------------------------------
T ss_pred eeEEEEEEeecCccccccccCcccccccCCcchhhcCceeccCCEec---------------------------------
Confidence 22222221 000000 0000 0 000000011233333322
Q ss_pred CCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCc
Q 008351 426 YTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQR 505 (569)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~ 505 (569)
..+.+.++.|++++|.|.|.+. ..+.||||+|||.|+|++. ++.+
T Consensus 237 -----------------~~p~l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~-----------------d~~~ 281 (647)
T 1sdd_B 237 -----------------NLPGLRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGT-----------------QQHQ 281 (647)
T ss_dssp -----------------CCCCCEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSS-----------------SCEE
T ss_pred -----------------CCCCeEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecC-----------------CCcc
Confidence 1134578899999999999763 2358999999999999853 2347
Q ss_pred cceEEeCCCcEEEEEEEeCCceeEEEeeccccccccccEEEEEEec
Q 008351 506 RNTIAVPVGGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVEN 551 (569)
Q Consensus 506 rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 551 (569)
+||+.|.||+++.|+|++++||.|+||||+++|++.|||++|.|.+
T Consensus 282 ~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 282 LGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp ESSEEECTTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred cceEEECCCeEEEEEEEeccceEeecccCcccccccccccceeeec
Confidence 9999999999999999999999999999999999999999999964
No 48
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.88 E-value=1.4e-21 Score=197.83 Aligned_cols=241 Identities=18% Similarity=0.185 Sum_probs=158.2
Q ss_pred CceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCC-CeEEEEEeCceeEEEEecCCCCCceEeeEEEEcCC
Q 008351 188 SDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALN-NQLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPG 266 (569)
Q Consensus 188 ~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pg 266 (569)
...+++||+ -..|.|++++|+++++|++|.... ..+.+|+||.. +.||.... ..|.||
T Consensus 58 ~~~~~~ng~-----------~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~~------~~i~PG 116 (327)
T 1kbv_A 58 YRYWTFDGD-----------VPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAAA------TFTAPG 116 (327)
T ss_dssp EEEEEETTB-----------SSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTTT------TCBCTT
T ss_pred EEEEEECCc-----------cCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCcc------eeecCC
Confidence 357999998 245899999999999999999753 46788998863 57887531 248999
Q ss_pred cEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCC
Q 008351 267 QTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSNLTGLTDGPH 346 (569)
Q Consensus 267 eR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~ 346 (569)
|++++.++++ .+|+||+|||....... ... +..+.+.+.... .+| .
T Consensus 117 ~~~~y~f~~~-~~Gt~wyH~h~~~~~~~-~~~--Gl~G~~iV~~~~-----~~p---~---------------------- 162 (327)
T 1kbv_A 117 RTSTFSFKAL-QPGLYIYHCAVAPVGMH-IAN--GMYGLILVEPKE-----GLP---K---------------------- 162 (327)
T ss_dssp EEEEEEEECC-SCEEEEEECCCSSHHHH-HHT--TCEEEEEEECTT-----CCC---C----------------------
T ss_pred CEEEEEEECC-CCeEEEEEeCCCChhhh-hhc--ceEEEEEEecCC-----CCC---C----------------------
Confidence 9999999998 58999999986321000 001 133334333321 111 1
Q ss_pred CCCCCCCCceEEEEEEeccccccccc---------ccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCCCC
Q 008351 347 WVPVPRQVDKHMFVTVGLALDRCAAN---------ATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNFP 417 (569)
Q Consensus 347 ~~~~p~~~d~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~~ 417 (569)
.|+.+.+.+.--....... ....... .-.+.+||+.+.
T Consensus 163 -------~d~e~~l~~~d~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~iNG~~~~------------------------ 209 (327)
T 1kbv_A 163 -------VDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAVAEQ--PEYVVFNGHVGA------------------------ 209 (327)
T ss_dssp -------CSEEEEEEEEEECBSSCTTCCEEECBCHHHHHHTC--CSEEEETTSTTT------------------------
T ss_pred -------CceEEEEEeeeeeccCccccccccccChhHhccCC--CceEEEcCcccC------------------------
Confidence 1111111110000000000 0000000 012334443210
Q ss_pred CCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCccccccc
Q 008351 418 NNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKK 497 (569)
Q Consensus 418 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~ 497 (569)
......+.++.|++++|.|.|.+. ...|+||+|||.|+|++...+.
T Consensus 210 -----------------------~~~~~~l~v~~G~~vRlRliN~~~--~~~~~~~l~Gh~f~vi~~DG~~--------- 255 (327)
T 1kbv_A 210 -----------------------LTGDNALKAKAGETVRMYVGNGGP--NLVSSFHVIGEIFDKVYVEGGK--------- 255 (327)
T ss_dssp -----------------------TSGGGCEEEETTEEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGSS---------
T ss_pred -----------------------CCCceeEEeCCCCEEEEEEECCCC--CCceeEEEeCCEEEEEEcCCCc---------
Confidence 001145688999999999999763 3689999999999999975321
Q ss_pred ccCCCCCccceEEeCCCcEEEEEEEeCCceeEEEeecccccc-ccccEEEEEEecCC
Q 008351 498 FNLVNPQRRNTIAVPVGGWAVIRFQANNPGVWFVHCHLDVHL-PWGLATAFVVENGP 553 (569)
Q Consensus 498 ~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~ 553 (569)
..|.++|++.|.||+...|.|++++||.|++|||+.+|. ..||++++.|....
T Consensus 256 ---~~p~~~d~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~ 309 (327)
T 1kbv_A 256 ---LINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAE 309 (327)
T ss_dssp ---CEECSBSEEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCC
T ss_pred ---CCCCceeEEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEECCCC
Confidence 225689999999999999999999999999999999995 88999999998654
No 49
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.88 E-value=1.5e-21 Score=199.19 Aligned_cols=94 Identities=23% Similarity=0.259 Sum_probs=78.3
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCC--ccceEEeCCCcEEEEEEE
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQ--RRNTIAVPVGGWAVIRFQ 522 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~--~rDTv~vp~~g~~~irf~ 522 (569)
..+.++.|++++|++.|.+. ..|++|+|||.|+|+.. |.+ .+++ ++||+.|++|+.+.|.|.
T Consensus 231 ~~l~v~~G~r~Rl~n~~~~~---~~~~~~i~gh~~~Vi~d--G~~-----------~~~p~~~~dtv~l~pGer~~v~v~ 294 (340)
T 2bw4_A 231 HALTAAVGERVLVVHSQANR---DTRPHLIGGHGDYVWAT--GKF-----------RNPPDLDQETWLIPGGTAGAAFYT 294 (340)
T ss_dssp GCEEEETTCEEEEEEEESSS---CBCEEEETCCEEEEETT--CCT-----------TSCCEEEESCCCBCTTEEEEEEEE
T ss_pred CceEcCCCCEEEEEECCCCC---ccceEEecCcceEEeCC--Ccc-----------cCCccccceEEEeCCCceEEEEEE
Confidence 55788999999988877654 78999999999999852 221 1222 479999999999999999
Q ss_pred eCCceeEEEeeccc-cccccccEEEEEEecCCC
Q 008351 523 ANNPGVWFVHCHLD-VHLPWGLATAFVVENGPT 554 (569)
Q Consensus 523 adnpG~w~~HCHil-~H~d~GM~~~~~V~~~~~ 554 (569)
+++||.|+||||++ +|++.|||+.|+|.....
T Consensus 295 ~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 295 FRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred CCCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 99999999999999 599999999999986543
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.85 E-value=3.6e-20 Score=188.40 Aligned_cols=94 Identities=19% Similarity=0.197 Sum_probs=74.4
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCC-ccceEEeCCCcEEEEEEEe
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQ-RRNTIAVPVGGWAVIRFQA 523 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~-~rDTv~vp~~g~~~irf~a 523 (569)
..+.++.|++++|++.|.+. ..|++++|+|.|.|++. |.+. ..|. ++||+.|.||+.+.|.|.+
T Consensus 225 ~~l~v~~Ger~Rl~n~~~~~---~~~~h~i~~h~~~Vi~d--G~~~----------~~p~~~~dtv~l~pGer~~v~v~a 289 (333)
T 1mzy_A 225 GALKAKVGDNVLFVHSQPNR---DSRPHLIGGHGDLVWET--GKFH----------NAPERDLETWFIRGGTAGAALYKF 289 (333)
T ss_dssp GCEEEETTCEEEEEEEESSS---CBCEEEETCCEEEEETT--CCTT----------SCCEEEESBCCBCTTEEEEEEEEC
T ss_pred cceEecCCCEEEEEECCCCC---ccccEEECCCCeEEEeC--Cccc----------CCCccCcceEEECCCceEEEEEEc
Confidence 45788999999988877543 34445577788888762 3221 1122 5899999999999999999
Q ss_pred CCceeEEEeecccccc-ccccEEEEEEecCC
Q 008351 524 NNPGVWFVHCHLDVHL-PWGLATAFVVENGP 553 (569)
Q Consensus 524 dnpG~w~~HCHil~H~-d~GM~~~~~V~~~~ 553 (569)
++||.|+||||++.|+ +.|||++|+|....
T Consensus 290 ~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~ 320 (333)
T 1mzy_A 290 LQPGVYAYVNHNLIEAVHKGATAHVLVEGEW 320 (333)
T ss_dssp CSCEEEEEEESSHHHHHTTCCEEEEEEESCC
T ss_pred CCCEEEEEecChhhhHhhCCCEEEEEEcCCC
Confidence 9999999999999997 99999999998654
No 51
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.83 E-value=4.3e-22 Score=221.44 Aligned_cols=88 Identities=20% Similarity=0.346 Sum_probs=77.9
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|++++|.|.|.+. ..+.||||||||.|+|++.+ +.++||+.|+|++++.|+|++|
T Consensus 368 ~~l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-----------------g~~~Dtv~l~Pg~~~~v~~~ad 429 (770)
T 2r7e_B 368 PGLVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-----------------EYKMALYNLYPGVFETVEMLPS 429 (770)
T ss_dssp CCCCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-----------------CCEESEEECCTTCCCEEEECCS
T ss_pred CCeEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-----------------CceeeEEEECCCeEEEEEEEeC
Confidence 34578899999999999763 23589999999999998653 1289999999999999999999
Q ss_pred CceeEEEeeccccccccccEEEEEEe
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
+||.|+||||+++|++.|||+.|.|.
T Consensus 430 ~pG~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 430 KAGIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp SCBCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred CCCceEEEeccccccccccccccccc
Confidence 99999999999999999999999984
No 52
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.82 E-value=1.3e-18 Score=177.28 Aligned_cols=265 Identities=18% Similarity=0.179 Sum_probs=153.3
Q ss_pred CceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCC-CeEEEEEeCceeEEEEecCCCCCceEeeEEEEcCC
Q 008351 188 SDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALN-NQLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPG 266 (569)
Q Consensus 188 ~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pg 266 (569)
...+++||+ -..|.|+++.|+++++|+.|.... ..|.++++++.. +.||..+. .|.||
T Consensus 53 ~~~~~~ng~-----------~pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~~-------~i~pG 111 (336)
T 1oe1_A 53 LQAMTFNGS-----------MPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKLT-------NVNPG 111 (336)
T ss_dssp EEEEEETTB-----------SSCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGGC-------CBCTT
T ss_pred EEEEEECCc-----------cCCCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcceE-------EeCCC
Confidence 357999998 245899999999999999999742 457889988752 22333322 38999
Q ss_pred cEEEEEEEeCCCCceeEEEeeeccc-CCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCC
Q 008351 267 QTTDVLLKADQPVGSYYMAARAYAS-APQIPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSNLTGLTDGP 345 (569)
Q Consensus 267 eR~dv~v~~~~~~G~y~l~~~~~~~-~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~ 345 (569)
|+++..++++ .+|.||+|||.... ... ... +..+.+.+........ + .
T Consensus 112 ~~~~y~f~~~-~~Gt~~yH~h~~~~~~~~-~~~--Gl~G~liV~~~~~~~~---~--------------------~---- 160 (336)
T 1oe1_A 112 EQATLRFKAD-RSGTFVYHCAPEGMVPWH-VVS--GMSGTLMVLPRDGLKD---P--------------------Q---- 160 (336)
T ss_dssp EEEEEEEECC-SCEEEEEECCCTTCHHHH-HHT--TCEEEEEEECTTCCBC---T--------------------T----
T ss_pred CEEEEEEECC-CCeEEEEecCCCCchhHH-HhC--CCeEEEEEecCcCCcc---c--------------------c----
Confidence 9999999998 59999999996421 000 001 2334443332111000 0 0
Q ss_pred CCCCCCCCCceEEEEEEecccccccccccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCCCCCCCCCCcc
Q 008351 346 HWVPVPRQVDKHMFVTVGLALDRCAANATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPNFPNNPPLKFD 425 (569)
Q Consensus 346 ~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~p~~~~ 425 (569)
..+...|+.+.+.+. ...... ...+ .+. .|..+. ......... ..+ ..+..+-
T Consensus 161 ---~~~~~~D~e~~l~~~--D~~~~~-----~~~g-~~~------~~~~~~-~~~~~~~~~-~~~--------~~~~~~l 213 (336)
T 1oe1_A 161 ---GKPLHYDRAYTIGEF--DLYIPK-----GPDG-KYK------DYATLA-ESYGDTVQV-MRT--------LTPSHIV 213 (336)
T ss_dssp ---SCBCCCSEEEEEEEE--EECCCB-----CTTS-SBC------CCSSTG-GGHHHHHHH-HHT--------TCCSEEE
T ss_pred ---cCcccCCceeEeeee--eeeecc-----ccCC-cee------eccccc-ccccchhhH-hhc--------CCCCEEE
Confidence 011123454443321 000000 0000 000 010000 000000000 000 0011112
Q ss_pred CCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCC-
Q 008351 426 YTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQ- 504 (569)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~- 504 (569)
++|... ...+...+.++.|++++|+..+.+. ..+++++|||.|.|+. .|.+ ..|.
T Consensus 214 iNG~~~--------~~~~~~~l~v~~GervRlin~~~~~---~~~~~~i~gh~~~Vi~--DG~~-----------~~p~~ 269 (336)
T 1oe1_A 214 FNGKVG--------ALTGANALTAKVGETVLLIHSQANR---DTRPHLIGGHGDWVWE--TGKF-----------ANPPQ 269 (336)
T ss_dssp ETTSTT--------TTSGGGCEEEETTCEEEEEEEESSS---CBCEEETTCCEEEEET--TCCT-----------TSCCE
T ss_pred ECCeec--------cCCCCcceEcCCCCEEEEEecCCCC---ccceEEECCcCceEeC--CCcC-----------cCCcc
Confidence 222100 0111256788999999987666543 5566667999999985 3322 1222
Q ss_pred -ccceEEeCCCcEEEEEEEeCCceeEEEeecccccc-ccccEEEEEEecCCCC
Q 008351 505 -RRNTIAVPVGGWAVIRFQANNPGVWFVHCHLDVHL-PWGLATAFVVENGPTP 555 (569)
Q Consensus 505 -~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~~ 555 (569)
+.||+.|++|+...+.|.+++||.|+||||.+.|. +.||+++|.|.....+
T Consensus 270 ~~~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~~ 322 (336)
T 1oe1_A 270 RDLETWFIRGGSAGAALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWND 322 (336)
T ss_dssp EEESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCCT
T ss_pred ccceEEEECCCCcEEEEEEcCCCceEEEEechhhccccCCCeEEEEECCCCCh
Confidence 46999999999999999999999999999999986 9999999999865543
No 53
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.81 E-value=5.7e-19 Score=186.72 Aligned_cols=240 Identities=16% Similarity=0.176 Sum_probs=159.0
Q ss_pred CceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCC-CeEEEEEeCceeEEEEecCCCCCceEeeEEEEcCC
Q 008351 188 SDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALN-NQLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPG 266 (569)
Q Consensus 188 ~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pg 266 (569)
...+++||+. ..|.|+++.|+++++|+.|.... ..+.+|+||+. ..||... +..|.||
T Consensus 48 ~~~~~~ng~~-----------pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg 106 (442)
T 2zoo_A 48 YVFWSFGETV-----------PGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPG 106 (442)
T ss_dssp EEEEEETTBS-----------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTT
T ss_pred EEEEEECCcC-----------CCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCC
Confidence 3579999982 35899999999999999999642 46889999975 4687643 2258999
Q ss_pred cEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccccCCCCCCCC
Q 008351 267 QTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDGAASSANPLMPALPAFNDTPTAHKFYSNLTGLTDGPH 346 (569)
Q Consensus 267 eR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~~p~~p~~~~~~~~~~~~~~l~~l~~~~~ 346 (569)
+++++.++++ .+|.||+|||....... . ..++.+.|.+..... + |.
T Consensus 107 ~~~~y~f~~~-~~Gt~~yH~H~~~~~~~--~-~~Gl~G~~iv~~~~~-----~---~~---------------------- 152 (442)
T 2zoo_A 107 HTSTFNFKAL-NPGLYIYHCATAPVGMH--I-ANGMYGLILVEPKEG-----L---AP---------------------- 152 (442)
T ss_dssp CEEEEEEECC-SCEEEEEECCCSSHHHH--H-HTTCEEEEEEECTTC-----C---CC----------------------
T ss_pred CEEEEEEEcC-CCeEEEEecCCCChHHH--H-hCccEEEEEEeCCCC-----C---CC----------------------
Confidence 9999999998 69999999974211000 0 012445555543210 1 11
Q ss_pred CCCCCCCCceEEEEEEeccccccccc-----------ccccCCCCCeeEEeecCceeecCCCchhhhhhhcccCCccCCC
Q 008351 347 WVPVPRQVDKHMFVTVGLALDRCAAN-----------ATCQGPNGQRFSASMNNHSFQFPTSLSLLQAFFFNVGGIYTPN 415 (569)
Q Consensus 347 ~~~~p~~~d~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~in~~~~~~p~~~~~~~~~~~~~~g~~~~~ 415 (569)
.|+.+.+.+.- ...... .... ....-.+.|||+.+.
T Consensus 153 -------~d~e~~l~l~d--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~liNG~~~~---------------------- 199 (442)
T 2zoo_A 153 -------VDREYYLVQGD--FYTKGEFGEAGLQPFDMAKAI--DEDADYVVFNGSVGS---------------------- 199 (442)
T ss_dssp -------CSEEEEEEEEE--ECBSSCTTCCEEECBCHHHHH--TTCCSEEEETTSTTT----------------------
T ss_pred -------CCceEEEEeee--eeccCcccccccccCChhHhc--cCCCCEEEECCCcCC----------------------
Confidence 11222111110 000000 0000 000012233333210
Q ss_pred CCCCCCCCccCCCCCCCCCccccCCCCcceEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCccccc
Q 008351 416 FPNNPPLKFDYTNPNVSNNTSLLFAPKLTSVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDI 495 (569)
Q Consensus 416 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~ 495 (569)
......+.++.|++++|.|.|.+. ...|+||+||+.|.|++...+
T Consensus 200 -------------------------~~~~~~l~v~~G~~vrlrliN~~~--~~~~~~~i~g~~~~vi~~DG~-------- 244 (442)
T 2zoo_A 200 -------------------------TTDENSLTAKVGETVRLYIGNGGP--NLVSSFHVIGEIFDTVYVEGG-------- 244 (442)
T ss_dssp -------------------------TSGGGCEEEETTCEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGS--------
T ss_pred -------------------------CCCCCceEeCCCCEEEEEEEeCCC--CCceeeEEcCCEEEEEecCCc--------
Confidence 001134678899999999999753 268999999999999987432
Q ss_pred ccccCCCCCccceEEeCCCcEEEEEEEeCCceeEEEeeccccc-cccccEEEEEEecCCC
Q 008351 496 KKFNLVNPQRRNTIAVPVGGWAVIRFQANNPGVWFVHCHLDVH-LPWGLATAFVVENGPT 554 (569)
Q Consensus 496 ~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H-~d~GM~~~~~V~~~~~ 554 (569)
. ..|.+.|++.|.||+...|.|+++++|.|++|||...| .+.||++.+.|.....
T Consensus 245 -~---~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 245 -S---LKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp -S---CEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred -c---CCCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 1 22568999999999999999999999999999999999 5999999999986654
No 54
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.80 E-value=2.4e-18 Score=181.63 Aligned_cols=251 Identities=13% Similarity=0.130 Sum_probs=160.3
Q ss_pred eEEEEEEEEEEEeccCc-----------eeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CceeEee-ecccccCCC
Q 008351 25 IVEHSFHVKNLTIGRLC-----------RQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESP-YNITIHW-HGIFQLLSP 91 (569)
Q Consensus 25 ~~~~~l~~~~~~~~~~g-----------~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~-~~~~iH~-HG~~~~~~~ 91 (569)
.+++.|.+..-....+| .....+++||+. .|+|++++| ++|+||+|... ....+|+ ||....-..
T Consensus 152 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~ 229 (451)
T 2uxt_A 152 VDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS 229 (451)
T ss_dssp TTEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE
T ss_pred CceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE
Confidence 45677777766554333 345789999996 699999999 99999999975 4567777 665433222
Q ss_pred CCCCCCC-----cccccCCCCCeeEEEEEeCCCCcceeEecchhhhhccc-e-----------eeEE-EeCCCCCCCCCC
Q 008351 92 WADGPNM-----ITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRATV-Y-----------GALI-IRPKSGHEYPYP 153 (569)
Q Consensus 92 ~~DG~~~-----~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~Gl-~-----------G~li-V~~~~~~~~~~~ 153 (569)
.||.+. +.+..|.||||+++.+++ .+.|+||++++......|+ . .+++ .........+
T Consensus 230 -~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~-- 305 (451)
T 2uxt_A 230 -GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLV-- 305 (451)
T ss_dssp -CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----
T ss_pred -eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCc--
Confidence 499642 456889999999999998 5789999998864322121 0 1111 1111100000
Q ss_pred CCCCceeEEeeeeeccCH-HHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCC
Q 008351 154 KPDKEVPILLGEWWNANV-VDVENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNN 232 (569)
Q Consensus 154 ~~d~e~~l~l~d~~~~~~-~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~ 232 (569)
..+.+..|..+..... ..........+ .++|||+.+. ...+.+.++.|++++|+|+|. .
T Consensus 306 --~~~~p~~L~~~~~~~~~~~~~~~~~l~~-------~~~iNg~~f~--------~~~~~~~~~~G~~~~~~l~N~---~ 365 (451)
T 2uxt_A 306 --TDSLPMRLLPTEIMAGSPIRSRDISLGD-------DPGINGQLWD--------VNRIDVTAQQGTWERWTVRAD---E 365 (451)
T ss_dssp ----CCCSCSSSSCCCCCCCSEEEEEEECS-------SSSBTTBCCC--------TTCCCEEEETTCEEEEEEEEE---E
T ss_pred --cccCccccCCCCCCCCCCcceEEEEEee-------EEEECCEeCC--------CCCCcEEcCCCCEEEEEEECC---C
Confidence 0000000000000000 00000000000 4679999663 123568999999999999998 4
Q ss_pred eEEEEEeCceeEEEEecCCCC---CceEeeEEEEcCCcEEEEEEEeCCCCce----eEEEeeecccCCCCCCCCcceEEE
Q 008351 233 QLFFKIANHKFTVVSVDASYT---DPYVTDVVVIAPGQTTDVLLKADQPVGS----YYMAARAYASAPQIPFDNTTTRGI 305 (569)
Q Consensus 233 ~~~~~i~gh~~~via~DG~~~---~p~~~d~v~l~pgeR~dv~v~~~~~~G~----y~l~~~~~~~~~~~~~~~~~~~ai 305 (569)
.|+||||||.|+|++.||.+. .|.+.|++.| |+++.|.++++ ++|. |.+|||...... .++-+.
T Consensus 366 ~HP~HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~d-npg~~~g~w~~HCHil~H~d------~GMm~~ 436 (451)
T 2uxt_A 366 PQAFHIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFG-QPSWAHFPFYFNSQTLEMAD------RGSIGQ 436 (451)
T ss_dssp EEEEEETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECC-SCCBTTBCEEEEESSHHHHH------TTCEEE
T ss_pred CcCeEECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeC-CCCCCCCceEEeCCchhHHh------CCCcEE
Confidence 699999999999999999876 4788999999 99999999998 6666 999999976543 235566
Q ss_pred EEEcC
Q 008351 306 VVYDG 310 (569)
Q Consensus 306 l~y~~ 310 (569)
+.+..
T Consensus 437 ~~v~~ 441 (451)
T 2uxt_A 437 LLVNP 441 (451)
T ss_dssp EEEEC
T ss_pred EEEcc
Confidence 66654
No 55
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.79 E-value=1.9e-18 Score=182.15 Aligned_cols=234 Identities=21% Similarity=0.235 Sum_probs=162.8
Q ss_pred eEEEEEEEEEEEecc------------CceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CceeEeeecccccCCC
Q 008351 25 IVEHSFHVKNLTIGR------------LCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESP-YNITIHWHGIFQLLSP 91 (569)
Q Consensus 25 ~~~~~l~~~~~~~~~------------~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~ 91 (569)
.+++.|.+..-.... .|.....+++||+. .|.|++++| ++|+||+|... ....+|++|.......
T Consensus 146 ~~e~~l~l~D~~~~~~~~~~~~~~~~~~g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~ 223 (439)
T 2xu9_A 146 AEEHLLVLKDLALQGGRPAPHTPMDWMNGKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIA 223 (439)
T ss_dssp SEEEEEEEEEECEETTEECCCCHHHHHHCCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEE
T ss_pred CCcEEEEEEeeeeCCCCcCCCCccccccCCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEe
Confidence 456666665543322 13456789999997 699999999 99999999975 4567777776543322
Q ss_pred CCCCCCC-----cccccCCCCCeeEEEEEeCCCCcceeEecchhhh--hc--cc--------------eee--EEEeCCC
Q 008351 92 WADGPNM-----ITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLL--RA--TV--------------YGA--LIIRPKS 146 (569)
Q Consensus 92 ~~DG~~~-----~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~--~~--Gl--------------~G~--liV~~~~ 146 (569)
.||.+. +....|.|||+++..+++ .++|.||++++.... .. || ... +.+....
T Consensus 224 -~DG~~~~~p~~~~~l~l~pgeR~dv~v~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 301 (439)
T 2xu9_A 224 -ADGGFLEEPLEVSELLLAPGERAEVLVRL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP 301 (439)
T ss_dssp -ETTEEEEEEEEESCEEECTTCEEEEEEEC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC
T ss_pred -cCCCCCCCceEeceEEECCceeEEEEEEc-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC
Confidence 499762 345679999999999998 669999999974311 10 22 111 2222211
Q ss_pred CCCCCCCCC-----C-----CceeEEeeeeeccCHHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEE
Q 008351 147 GHEYPYPKP-----D-----KEVPILLGEWWNANVVDVENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVV 216 (569)
Q Consensus 147 ~~~~~~~~~-----d-----~e~~l~l~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~ 216 (569)
...+.+.. + .+..+.+.- .. . ...++|||+.+. .....+.++
T Consensus 302 -~~~~~p~~l~~~~~l~~~~~~r~~~l~~---~~----------~------g~~~~iNg~~~~--------~~~~~~~~~ 353 (439)
T 2xu9_A 302 -KPLPLPKALSPFPTLPAPVVTRRLVLTE---DM----------M------AARFFINGQVFD--------HRRVDLKGQ 353 (439)
T ss_dssp -CCCCCCSCCCCCCCCCCCSEEEEEEEEE---EG----------G------GTEEEETTBCCC--------TTCCCEEEC
T ss_pred -ccccCcccCCCcccCCCCCcceEEEEEe---ec----------c------CceEeECCEECC--------CCCCceecC
Confidence 11111100 0 001111110 00 0 136899999663 123458899
Q ss_pred cCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCC-CceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccC
Q 008351 217 EGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYT-DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASA 292 (569)
Q Consensus 217 ~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~ 292 (569)
.|++++|+|.|.+.. .|+||||||.|+|++.+|... .|.+.|++.|.||+++.|.++++ +||.|.+|||.....
T Consensus 354 ~g~~~~~~~~N~~~~-~HP~HLHG~~F~Vl~~~g~~~~~p~~rDTv~v~p~~~v~i~f~ad-npG~w~~HCHil~H~ 428 (439)
T 2xu9_A 354 AQTVEVWEVENQGDM-DHPFHLHVHPFQVLSVGGRPFPYRAWKDVVNLKAGEVARLLVPLR-EKGRTVFHCHIVEHE 428 (439)
T ss_dssp TTCEEEEEEEECSSS-CEEEEESSCCBEEEEETTEECSSCCCBSEEEECTTCEEEEEEECC-SCEEEEEEESSHHHH
T ss_pred CCCEEEEEEEcCCCC-CCCceeCCCcEEEEeeCCCCCCCCCCeEEEEeCCCCEEEEEEEcC-CCCCEEEECCcchhh
Confidence 999999999999754 499999999999999999876 68899999999999999999987 899999999997654
No 56
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.73 E-value=1.3e-16 Score=171.31 Aligned_cols=252 Identities=17% Similarity=0.160 Sum_probs=159.1
Q ss_pred eEEEEEcCCCC---------CCeEEEecCCEEEEEEEeCCC-CceeEeeecccccCCCCCCCCCC----cccccCCCCCe
Q 008351 44 RVITAVNGRLP---------GPTIRVHEGDTLVVHVFNESP-YNITIHWHGIFQLLSPWADGPNM----ITQCPITPGRS 109 (569)
Q Consensus 44 ~~~~~~NG~~P---------gP~i~~~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~tq~~i~pG~~ 109 (569)
...+++||+.. -|+|++++|+++|+||+|... ....+|++|....-.. .||.+- +....|.||||
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccce
Confidence 46789999853 189999999999999999975 4556777665443222 499652 34467999999
Q ss_pred eEEEEEeCCCCcceeEecchhhh----hccceeeEEEeCCCCCCCCCCCCCCceeEEeeeeeccC------HH-----HH
Q 008351 110 YTYKFNVINQEGTLWWHGHVSLL----RATVYGALIIRPKSGHEYPYPKPDKEVPILLGEWWNAN------VV-----DV 174 (569)
Q Consensus 110 ~~y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~------~~-----~~ 174 (569)
++..+++++.+|+||.+++.... ..|+..+++.........+..... . ...+.+..... .. ..
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~-~~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-S-GTALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-C-SCBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-c-ccccchhhcccCCcccCCCcccCCcc
Confidence 99999995557999999975421 114444555443221111100000 0 00000000000 00 00
Q ss_pred HHH-HHhcCCCCCCCceEEEcCcCCCCCCC-------------CCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeC
Q 008351 175 ENQ-AQITGGAPNISDAYTINGKPGDLYPC-------------SQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIAN 240 (569)
Q Consensus 175 ~~~-~~~~g~~~~~~~~~liNG~~~~~~~~-------------~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~g 240 (569)
... .+..+. ......|.|||+++..-.. .........+.++.|++++++++| ...|+|||||
T Consensus 348 ~~~~~l~~~~-~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N---~~~HP~HLHG 423 (521)
T 1v10_A 348 DINLNLRIGR-NATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG---GGNHPFHLHG 423 (521)
T ss_dssp SEEEECCEEC-CSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC---CBSCEEEESS
T ss_pred eEEEEEEEec-CCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC---CCCCCEEEcc
Confidence 000 000000 0011257899997632100 000012357899999999999999 3459999999
Q ss_pred ceeEEEEecCCC----CCceEeeEEEE-cCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEc
Q 008351 241 HKFTVVSVDASY----TDPYVTDVVVI-APGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYD 309 (569)
Q Consensus 241 h~~~via~DG~~----~~p~~~d~v~l-~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~ 309 (569)
|.|+|++.+|.. ..|...|++.| .+|+++.|.++++ +||.|.+|||...... .++.+.+.+.
T Consensus 424 h~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG~W~~HCHi~~H~~------~GM~~~~~v~ 490 (521)
T 1v10_A 424 HNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPGPWFLHCHIDWHLE------AGLAVVFAED 490 (521)
T ss_dssp CCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCEEEEEEESCHHHHT------TTCEEEEEES
T ss_pred ceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCeeEEEeeChHHHHh------CCCeEEEEEC
Confidence 999999999975 26899999999 7999999999998 8999999999976543 1345555554
No 57
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.73 E-value=2.7e-16 Score=168.30 Aligned_cols=273 Identities=15% Similarity=0.136 Sum_probs=167.1
Q ss_pred EEEEEEEEEEeccCce-----eeEEEEEcCCCC--------CCeEEEecCCEEEEEEEeCCC-CceeEeeecccccCCCC
Q 008351 27 EHSFHVKNLTIGRLCR-----QRVITAVNGRLP--------GPTIRVHEGDTLVVHVFNESP-YNITIHWHGIFQLLSPW 92 (569)
Q Consensus 27 ~~~l~~~~~~~~~~g~-----~~~~~~~NG~~P--------gP~i~~~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~ 92 (569)
++-|.+..-....++. ....+++||+.. .|+|++++|+++|+||+|... ....+|++|..+.-..
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~- 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE- 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEe-
Confidence 4555555544433332 356789999853 289999999999999999975 3456666665443222
Q ss_pred CCCCC----CcccccCCCCCeeEEEEEeCCCCcceeEecchhh--h------hccceeeEEEeCCCCCCCCCCCCCCcee
Q 008351 93 ADGPN----MITQCPITPGRSYTYKFNVINQEGTLWWHGHVSL--L------RATVYGALIIRPKSGHEYPYPKPDKEVP 160 (569)
Q Consensus 93 ~DG~~----~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~--~------~~Gl~G~liV~~~~~~~~~~~~~d~e~~ 160 (569)
.||.+ .+....|.||||++..+++++.+|+||.+++... . ..++..+++.........|......+.
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~- 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNP- 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSC-
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCcc-
Confidence 49965 2344679999999999999555799999987531 1 114434455443221110100000000
Q ss_pred EEeeeeeccCH--HHH----HH-H---HHhcCCCCCCCceEEEcCcCCCCCCC-------------CCCCCcceEEEEEc
Q 008351 161 ILLGEWWNANV--VDV----EN-Q---AQITGGAPNISDAYTINGKPGDLYPC-------------SQNPNQIYKLKVVE 217 (569)
Q Consensus 161 l~l~d~~~~~~--~~~----~~-~---~~~~g~~~~~~~~~liNG~~~~~~~~-------------~~~~~~~~~~~v~~ 217 (569)
..+.+...... ... .. . ...-... .....|+|||+++..-.. .........+.++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 00000000000 000 00 0 0000000 011268899997632100 00001235789999
Q ss_pred CcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCC----CceEeeEEEE-cCCcEEEEEEEeCCCCceeEEEeeecccC
Q 008351 218 GKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYT----DPYVTDVVVI-APGQTTDVLLKADQPVGSYYMAARAYASA 292 (569)
Q Consensus 218 G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~----~p~~~d~v~l-~pgeR~dv~v~~~~~~G~y~l~~~~~~~~ 292 (569)
|++++++++|......|+||||||.|+|++.+|... .|...|++.| .||+++.|.++++ +||.|.+|||.....
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil~H~ 458 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIEFHL 458 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCEEEEEEESSHHHH
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcC-CCeeeeEecCchhHh
Confidence 999999999544455699999999999999999752 6889999999 8999999999998 899999999996654
Q ss_pred CCCCCCCcceEEEEEEc
Q 008351 293 PQIPFDNTTTRGIVVYD 309 (569)
Q Consensus 293 ~~~~~~~~~~~ail~y~ 309 (569)
. .++.+.+.+.
T Consensus 459 ~------~GM~~~~~v~ 469 (503)
T 1hfu_A 459 M------NGLAIVFAED 469 (503)
T ss_dssp H------TTCEEEEEEC
T ss_pred h------CCCeEEEEEC
Confidence 3 1344555553
No 58
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.70 E-value=4.7e-16 Score=164.22 Aligned_cols=241 Identities=15% Similarity=0.212 Sum_probs=160.4
Q ss_pred EEEEEEEEEEEeccCc-------------eeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CceeEeeecccccCCC
Q 008351 26 VEHSFHVKNLTIGRLC-------------RQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESP-YNITIHWHGIFQLLSP 91 (569)
Q Consensus 26 ~~~~l~~~~~~~~~~g-------------~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~ 91 (569)
.+| |.+.......+| .....+++||+. .|+|.+++|+ |+||+|... ....+|++|....-..
T Consensus 181 ~~~-l~l~D~~~~~~g~~~~~~~~~~~~g~~gd~~lvNG~~-~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa 256 (481)
T 3zx1_A 181 EKD-LMISDLRLDENAQIPNNNLNDWLNGREGEFVLINGQF-KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVG 256 (481)
T ss_dssp EEE-EEEEEECCBTTSCCCCCCHHHHHHCCCCSEEEETTEE-SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEE
T ss_pred cee-EEEEEEeccCCCccccccchhhccCCcCCEEEECCcc-CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEE
Confidence 345 666665554444 245689999996 5999999999 999999964 5567777776543322
Q ss_pred CCCCCC-----CcccccCCCCCeeEEEEEeCCCCcceeEecchhhhhc---------cceeeEEEeCCCCCCCC------
Q 008351 92 WADGPN-----MITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRA---------TVYGALIIRPKSGHEYP------ 151 (569)
Q Consensus 92 ~~DG~~-----~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~---------Gl~G~liV~~~~~~~~~------ 151 (569)
.||.. .+....|.||||++..+++ .+.|+|..-++...... ....-+.+.... ...|
T Consensus 257 -~DGg~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~lP~~l~~~ 333 (481)
T 3zx1_A 257 -TDGGLIEKTIYKEELFLSPASRVEVLIDA-PKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN-VELPKNLKIF 333 (481)
T ss_dssp -ETTEEEEEEEEESSEEECTTCEEEEEEEC-SSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC-CCCCSCSCCC
T ss_pred -cCCCccCCceEeCeEEECCccEEEEEEEc-CCCcEEEEEEecccccCccccCCCCceeEEEEecCCCC-ccCCccccCC
Confidence 48732 2345779999999999998 67788776654322110 001111122111 1111
Q ss_pred --CCCCCCceeEEeeeeeccC-------HHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEE
Q 008351 152 --YPKPDKEVPILLGEWWNAN-------VVDVENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYL 222 (569)
Q Consensus 152 --~~~~d~e~~l~l~d~~~~~-------~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~r 222 (569)
.+..+.++.+.++....+- ..... ..+ ...++|||+.+. ...+.+.++.|++++
T Consensus 334 ~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~iNG~~~~--------~~~~~~~~~~G~~v~ 396 (481)
T 3zx1_A 334 KPSEEPKEFKEIIMSEDHMQMHGMMGKSEGELK-IAL--------ASMFLINRKSYD--------LKRIDLSSKLGVVED 396 (481)
T ss_dssp CCCCCCCEEEEEEEEECCSTTTTGGGCCHHHHH-HHH--------HTTEEETTBCCC--------TTCCCEEEETTCCEE
T ss_pred CCCCCCCcEEEEEEeccchhccccccccccccc-ccc--------cceeEECCEeCC--------CCCceEEeCCCCEEE
Confidence 1122233444443211000 00000 000 125999999652 134679999999999
Q ss_pred EEEEecCCCCeEEEEEeCceeEEEEe--cCCCC---CceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccC
Q 008351 223 LRIINAALNNQLFFKIANHKFTVVSV--DASYT---DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASA 292 (569)
Q Consensus 223 lRliN~~~~~~~~~~i~gh~~~via~--DG~~~---~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~ 292 (569)
|+|.|.+. ..|+||||||.|+|++. ||... ++.+.|++.|.|||++.|.++++ +||.|.+|||.....
T Consensus 397 w~l~N~~~-~~Hp~HlHG~~F~vl~~~~~g~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d-~pG~w~~HCHil~H~ 469 (481)
T 3zx1_A 397 WIVINKSH-MDHPFHIHGTQFELISSKLNGKVQKAEFRALRDTINVRPNEELRLRMKQD-FKGLRMYHCHILEHE 469 (481)
T ss_dssp EEEEECSS-SCEEEEETTCCEEEEEEEETTEEEECSSCCEESEEEECTTCEEEEEECCC-SCEEEEEEESSHHHH
T ss_pred EEEEcCCC-CceeEEEeccEEEEEEecccCCCCCcccCcccceEEECCCCEEEEEEEcC-CCeeEEEEcCChHHH
Confidence 99999774 45999999999999999 99865 46789999999999999999997 899999999987654
No 59
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.67 E-value=3.9e-15 Score=158.22 Aligned_cols=245 Identities=17% Similarity=0.174 Sum_probs=152.3
Q ss_pred eeEEEEEcCCC---------CCCeEEEecCCEEEEEEEeCCC-CceeEeeeccc--ccCCCCCCCCC----CcccccCCC
Q 008351 43 QRVITAVNGRL---------PGPTIRVHEGDTLVVHVFNESP-YNITIHWHGIF--QLLSPWADGPN----MITQCPITP 106 (569)
Q Consensus 43 ~~~~~~~NG~~---------PgP~i~~~~Gd~v~i~l~N~l~-~~~~iH~HG~~--~~~~~~~DG~~----~~tq~~i~p 106 (569)
....++|||+- +-|.|++++|+++|+||+|... ....++.+|.. +.. .||.+ .+....|.|
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via---~DG~~~~P~~~~~l~i~p 243 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE---TDGVDSQELTVDEIQIFA 243 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE---ETTEEEEEEEESBEEECT
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE---eCCcccCCEEeeeEEEcC
Confidence 45689999973 3479999999999999999864 44556665544 444 49975 234467999
Q ss_pred CCeeEEEEEeCCCCcceeEecchhhh----hccceeeEEEeCCCCCCCCCCCCCC-ceeEEeeeeeccCHHHH-HHHHHh
Q 008351 107 GRSYTYKFNVINQEGTLWWHGHVSLL----RATVYGALIIRPKSGHEYPYPKPDK-EVPILLGEWWNANVVDV-ENQAQI 180 (569)
Q Consensus 107 G~~~~y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~d~-e~~l~l~d~~~~~~~~~-~~~~~~ 180 (569)
|||++..+++++.+|.||.++..... ..|...+++.........|...... ... .+.+......... ......
T Consensus 244 GqR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~ 322 (495)
T 3t6v_A 244 AQRYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPH 322 (495)
T ss_dssp TCEEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSS
T ss_pred ceEEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccC
Confidence 99999999996567999998864311 1133334554433211111100000 000 0000000000000 000000
Q ss_pred cCCC--------CCCCceEEEcCcCCCCCCC-------------CCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEe
Q 008351 181 TGGA--------PNISDAYTINGKPGDLYPC-------------SQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIA 239 (569)
Q Consensus 181 ~g~~--------~~~~~~~liNG~~~~~~~~-------------~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~ 239 (569)
.+.. ......|+|||+++..-.. .........+.++.|++++|.|.|......|+||||
T Consensus 323 ~~~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~~HP~HLH 402 (495)
T 3t6v_A 323 QGGADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGGPHPFHLH 402 (495)
T ss_dssp TTCSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSCCCEEEET
T ss_pred CCCCcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCCCcceeec
Confidence 0000 0011268899997631100 000012357899999999999984333456999999
Q ss_pred CceeEEEEecCCCC----CceEeeEEEEcC-CcEEEEEEEeCCCCceeEEEeeecccC
Q 008351 240 NHKFTVVSVDASYT----DPYVTDVVVIAP-GQTTDVLLKADQPVGSYYMAARAYASA 292 (569)
Q Consensus 240 gh~~~via~DG~~~----~p~~~d~v~l~p-geR~dv~v~~~~~~G~y~l~~~~~~~~ 292 (569)
||.|+|++.+|... .|...|++.|.+ |+.+.|.++++ +||.|.+|||.....
T Consensus 403 Gh~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG~W~~HCHi~~H~ 459 (495)
T 3t6v_A 403 GHDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPGPWFLHCHIDWHL 459 (495)
T ss_dssp TCCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCEEEEEEESCHHHH
T ss_pred CCcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCeeEEEEecchhHh
Confidence 99999999988654 688999999997 99999999999 899999999986544
No 60
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.66 E-value=6.7e-15 Score=158.26 Aligned_cols=227 Identities=13% Similarity=0.110 Sum_probs=148.9
Q ss_pred eEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CceeEeeecc--cccCCCCCCCCC----CcccccCCCCCeeEEEEEe
Q 008351 44 RVITAVNGRLPGPTIRVHEGDTLVVHVFNESP-YNITIHWHGI--FQLLSPWADGPN----MITQCPITPGRSYTYKFNV 116 (569)
Q Consensus 44 ~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~-~~~~iH~HG~--~~~~~~~~DG~~----~~tq~~i~pG~~~~y~~~~ 116 (569)
...+++||+. .|+|++++|+++|+||+|... ....++.+|. .+.. .||.+ .+....|.||||++..+++
T Consensus 167 ~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~---~DG~~~~P~~~~~l~l~~gqR~dvlv~~ 242 (534)
T 1zpu_A 167 PQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE---IDGITTEKNVTDMLYITVAQRYTVLVHT 242 (534)
T ss_dssp CSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE---ETTEEEEEEEESCEEECTTCEEEEEEEC
T ss_pred CceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe---ccCcCccccEeceEEECccceEEEEEEc
Confidence 5689999996 699999999999999999974 3445555554 4444 49965 2344679999999999998
Q ss_pred CCC-CcceeEecchhhhh-------ccce-eeEEEeCCCC-CCCC-----CC------------------CCCCceeEEe
Q 008351 117 INQ-EGTLWWHGHVSLLR-------ATVY-GALIIRPKSG-HEYP-----YP------------------KPDKEVPILL 163 (569)
Q Consensus 117 ~~~-~Gt~wYH~H~~~~~-------~Gl~-G~liV~~~~~-~~~~-----~~------------------~~d~e~~l~l 163 (569)
.++ .|.||......... .... .+++...... .+.+ +. ..++.+.|-+
T Consensus 243 ~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~ 322 (534)
T 1zpu_A 243 KNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDV 322 (534)
T ss_dssp CSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEE
T ss_pred CCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEE
Confidence 533 57899987654221 0111 2233222211 0000 00 0011111111
Q ss_pred eeeeccCHHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCC--------------CCC--CCcceEEEEEcCcEEEEEEEe
Q 008351 164 GEWWNANVVDVENQAQITGGAPNISDAYTINGKPGDLYPC--------------SQN--PNQIYKLKVVEGKTYLLRIIN 227 (569)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~--------------~~~--~~~~~~~~v~~G~~~rlRliN 227 (569)
+ +.. .......++|||+++..-.. +.. ......+.++.|++++|.|.|
T Consensus 323 ~--------------~~~--~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N 386 (534)
T 1zpu_A 323 V--------------MDN--LKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNN 386 (534)
T ss_dssp E--------------EEE--CTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEE
T ss_pred E--------------eec--cCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeC
Confidence 0 000 00112368899996532100 000 001346899999999999999
Q ss_pred cCCCCeEEEEEeCceeEEEEecCC-----------C---------CCceEeeEEEEcCCcEEEEEEEeCCCCceeEEEee
Q 008351 228 AALNNQLFFKIANHKFTVVSVDAS-----------Y---------TDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAAR 287 (569)
Q Consensus 228 ~~~~~~~~~~i~gh~~~via~DG~-----------~---------~~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~ 287 (569)
.+.. .|+||||||.|+|++.++. + ..|...|++.|.||+.+.|.++++ +||.|.+|||
T Consensus 387 ~~~~-~HP~HLHGh~F~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG~W~~HCH 464 (534)
T 1zpu_A 387 QDTG-THPFHLHGHAFQTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPGVWFFHCH 464 (534)
T ss_dssp CSSS-CEEEEETTCCEEEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCEEEEEEEC
T ss_pred CCCC-CCCeEecCCceEEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCeeEEEEeC
Confidence 8754 5999999999999998853 1 247899999999999999999998 8999999999
Q ss_pred ecccC
Q 008351 288 AYASA 292 (569)
Q Consensus 288 ~~~~~ 292 (569)
.....
T Consensus 465 i~~H~ 469 (534)
T 1zpu_A 465 IEWHL 469 (534)
T ss_dssp CHHHH
T ss_pred chhHh
Confidence 86554
No 61
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.65 E-value=5.3e-15 Score=157.18 Aligned_cols=244 Identities=15% Similarity=0.147 Sum_probs=151.1
Q ss_pred eeEEEEEcCCC--------CCCeEEEecCCEEEEEEEeCCC-CceeEeeecccccCCCCCCCCC----CcccccCCCCCe
Q 008351 43 QRVITAVNGRL--------PGPTIRVHEGDTLVVHVFNESP-YNITIHWHGIFQLLSPWADGPN----MITQCPITPGRS 109 (569)
Q Consensus 43 ~~~~~~~NG~~--------PgP~i~~~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~----~~tq~~i~pG~~ 109 (569)
....++|||+- +-|.|++++|+++|+||+|... ....+|.+|..+.-.. .||.+ .+....|.||||
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcE
Confidence 35689999973 3479999999999999999964 4456666665443222 49975 233467999999
Q ss_pred eEEEEEeCCCCcceeEecchhhh----hccceeeEEEeCCCCCCCCCCCCCCceeEEeeeeeccCH------H-----HH
Q 008351 110 YTYKFNVINQEGTLWWHGHVSLL----RATVYGALIIRPKSGHEYPYPKPDKEVPILLGEWWNANV------V-----DV 174 (569)
Q Consensus 110 ~~y~~~~~~~~Gt~wYH~H~~~~----~~Gl~G~liV~~~~~~~~~~~~~d~e~~l~l~d~~~~~~------~-----~~ 174 (569)
++..+++++..|.||..+..... ..+..-+++.........+......... .+.+...... . ..
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVK-PLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCSS-BCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCCc-ccccccccccccccCCCcccCCCC
Confidence 99999996567999998764211 1122224444432211111100000000 0000000000 0 00
Q ss_pred HHHH-HhcCCCCCCCceEEEcCcCCCCCC-------------CCCCCCcceEEEEEcCcEEEEEEEecC--CCCeEEEEE
Q 008351 175 ENQA-QITGGAPNISDAYTINGKPGDLYP-------------CSQNPNQIYKLKVVEGKTYLLRIINAA--LNNQLFFKI 238 (569)
Q Consensus 175 ~~~~-~~~g~~~~~~~~~liNG~~~~~~~-------------~~~~~~~~~~~~v~~G~~~rlRliN~~--~~~~~~~~i 238 (569)
.... ...+ .....|+|||+++..-. ..........+.++.|++++|.|.|.+ ....|+|||
T Consensus 323 d~~~~l~~~---~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HL 399 (499)
T 3pxl_A 323 DKAINMAFN---FNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHL 399 (499)
T ss_dssp SEEEECCEE---ECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEE
T ss_pred cEEEEEEEE---ecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCCcccee
Confidence 0000 0000 01226889999763100 000001235789999999999999422 234599999
Q ss_pred eCceeEEEEecCCCC----CceEeeEEEEcC---CcEEEEEEEeCCCCceeEEEeeecccC
Q 008351 239 ANHKFTVVSVDASYT----DPYVTDVVVIAP---GQTTDVLLKADQPVGSYYMAARAYASA 292 (569)
Q Consensus 239 ~gh~~~via~DG~~~----~p~~~d~v~l~p---geR~dv~v~~~~~~G~y~l~~~~~~~~ 292 (569)
|||.|+|++.+|... .|...|++.|.+ |+.+.|.++++ +||.|.+|||.....
T Consensus 400 HGh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG~W~~HCHi~~H~ 459 (499)
T 3pxl_A 400 HGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPGPWFLHCHIDFHL 459 (499)
T ss_dssp TTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCEEEEEEESSHHHH
T ss_pred cCCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCceEEEEeCChhHh
Confidence 999999999888643 689999999986 99999999999 999999999986544
No 62
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.65 E-value=7.1e-15 Score=159.18 Aligned_cols=217 Identities=18% Similarity=0.170 Sum_probs=140.3
Q ss_pred eEEEecCCEEEEEEEeCCC-CceeEeeecccccCCCCCCCCC----CcccccCCCCCeeEEEEEe-CCCCcceeEecchh
Q 008351 57 TIRVHEGDTLVVHVFNESP-YNITIHWHGIFQLLSPWADGPN----MITQCPITPGRSYTYKFNV-INQEGTLWWHGHVS 130 (569)
Q Consensus 57 ~i~~~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~----~~tq~~i~pG~~~~y~~~~-~~~~Gt~wYH~H~~ 130 (569)
+|++++|+++|+||+|... ....+|++|..+.-.. .||.+ .+....|.||||++..+++ .+.+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE-ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEE-ECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999965 4556776665443222 49964 2344679999999999998 35589999998865
Q ss_pred hhh-c--cceeeEEEeCCCCCCCC------CCCC--------------------------CCceeEEeeeeeccCHHHHH
Q 008351 131 LLR-A--TVYGALIIRPKSGHEYP------YPKP--------------------------DKEVPILLGEWWNANVVDVE 175 (569)
Q Consensus 131 ~~~-~--Gl~G~liV~~~~~~~~~------~~~~--------------------------d~e~~l~l~d~~~~~~~~~~ 175 (569)
... . ...+.|..........+ .+.. ++.+.+.++.
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~~p~~p~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~---------- 353 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSPPPQTPAWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQ---------- 353 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSCCCCCCCTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEE----------
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCCCCCCCccccccccccccccccccCCCCCCCCCCcEEEEEEEee----------
Confidence 311 1 12233333222210000 0000 0000010000
Q ss_pred HHHHhcCCCCCCCceEEEcCcCCCCC----------------C----------C---------CCCCCcceEEEEEcCcE
Q 008351 176 NQAQITGGAPNISDAYTINGKPGDLY----------------P----------C---------SQNPNQIYKLKVVEGKT 220 (569)
Q Consensus 176 ~~~~~~g~~~~~~~~~liNG~~~~~~----------------~----------~---------~~~~~~~~~~~v~~G~~ 220 (569)
+ .......+.|||+++..- + | .........+.++.|++
T Consensus 354 ------~-~~~~~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~ 426 (552)
T 1aoz_A 354 ------N-VINGYVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEV 426 (552)
T ss_dssp ------E-EETTEEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCE
T ss_pred ------c-cCCCeEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCE
Confidence 0 000012477888754210 0 0 00000123588999999
Q ss_pred EEEEEEecCCC-----CeEEEEEeCceeEEEEe-cCCC----------CCceEeeEEEEcCCcEEEEEEEeCCCCceeEE
Q 008351 221 YLLRIINAALN-----NQLFFKIANHKFTVVSV-DASY----------TDPYVTDVVVIAPGQTTDVLLKADQPVGSYYM 284 (569)
Q Consensus 221 ~rlRliN~~~~-----~~~~~~i~gh~~~via~-DG~~----------~~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l 284 (569)
++|.|.|.+.. ..|+||||||.|+|++. +|.+ ..|...|++.|.+|+.+.|.++++ +||.|.+
T Consensus 427 v~ivi~N~~~~~~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG~W~~ 505 (552)
T 1aoz_A 427 VDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPGVWAF 505 (552)
T ss_dssp EEEEEEECCCSSTTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCEEEEE
T ss_pred EEEEEeCCcccccccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCeEEEE
Confidence 99999998753 35999999999999998 4653 368899999999999999999998 8999999
Q ss_pred EeeecccC
Q 008351 285 AARAYASA 292 (569)
Q Consensus 285 ~~~~~~~~ 292 (569)
|||.....
T Consensus 506 HCHi~~H~ 513 (552)
T 1aoz_A 506 HCHIEPHL 513 (552)
T ss_dssp EESSHHHH
T ss_pred EeeehhHh
Confidence 99997654
No 63
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.64 E-value=3.8e-15 Score=157.20 Aligned_cols=251 Identities=15% Similarity=0.163 Sum_probs=157.9
Q ss_pred EEEEEEEEEEEeccCc--------------eeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CceeEee-ec--ccc
Q 008351 26 VEHSFHVKNLTIGRLC--------------RQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESP-YNITIHW-HG--IFQ 87 (569)
Q Consensus 26 ~~~~l~~~~~~~~~~g--------------~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~-~~~~iH~-HG--~~~ 87 (569)
.++.|.+..-....+| .....+++||+. .|.+.+ +|+++|+||+|... ....+++ +| +.+
T Consensus 151 ~d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~-~p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~v 228 (488)
T 3od3_A 151 DDVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAI-YPQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYV 228 (488)
T ss_dssp TEEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBS-SCEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEE
T ss_pred cceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCc-CccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEE
Confidence 3566777665544333 344689999996 588876 67899999999964 4566766 45 445
Q ss_pred cCCCCCCCCC-----CcccccCCCCCeeEEEEEeCCCCcceeEecchhhhhccce----e----eEEEeC-----CCCC-
Q 008351 88 LLSPWADGPN-----MITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRATVY----G----ALIIRP-----KSGH- 148 (569)
Q Consensus 88 ~~~~~~DG~~-----~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~Gl~----G----~liV~~-----~~~~- 148 (569)
..+ ||.+ .+....|.||||++..+++ .+.++|+.-+...... |+. . .+.|.+ ....
T Consensus 229 Ia~---DG~~l~~P~~~~~l~l~pGeR~dvlv~~-~~~~~~~l~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~P 303 (488)
T 3od3_A 229 IAS---DGGLLPEPVKVSELPVLMGERFEVLVEV-NDNKPFDLVTLPVSQM-GMAIAPFDKPHPVMRIQPIAISASGALP 303 (488)
T ss_dssp EEE---TTEEEEEEEEESCEEECTTCEEEEEEEE-CTTCCEEEEECCCSST-TTTSTTTTSCEEEEEEEEEEEECCCCCC
T ss_pred EEe---CCCcccCccEeceEEECCCCEEEEEEEe-CCCceEEEEEeccCCC-CcccccccCccceeEecccccCCCCCCC
Confidence 554 9953 2345779999999999999 6677787755432111 110 0 122221 1110
Q ss_pred ----CCC-CCC----CCCceeEEeeeee-ccCHHHHHHH----HHh------------cCCCC--------CCCceEEEc
Q 008351 149 ----EYP-YPK----PDKEVPILLGEWW-NANVVDVENQ----AQI------------TGGAP--------NISDAYTIN 194 (569)
Q Consensus 149 ----~~~-~~~----~d~e~~l~l~d~~-~~~~~~~~~~----~~~------------~g~~~--------~~~~~~liN 194 (569)
..+ .+. ..+++.+.+.... ......+..+ ++. .|... .....++||
T Consensus 304 ~~L~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~IN 383 (488)
T 3od3_A 304 DTLSSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKIN 383 (488)
T ss_dssp SCCCCCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEET
T ss_pred cccccCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeEC
Confidence 001 011 1122333332100 0000000000 000 01000 001247999
Q ss_pred CcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCC---ceEeeEEEEcCCcEEEE
Q 008351 195 GKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTD---PYVTDVVVIAPGQTTDV 271 (569)
Q Consensus 195 G~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~---p~~~d~v~l~pgeR~dv 271 (569)
|+.++ ...+.++++.|+++||+|+|.+....|+||||||.|+|++.||.... +.+.|++.|. ||++.|
T Consensus 384 G~~~~--------~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i 454 (488)
T 3od3_A 384 GQAFD--------MNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEV 454 (488)
T ss_dssp TBCCC--------TTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEE
T ss_pred CeeCC--------CCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEE
Confidence 99763 23567899999999999999996667999999999999999998874 3578999999 999999
Q ss_pred EEEeCC---CCceeEEEeeecccC
Q 008351 272 LLKADQ---PVGSYYMAARAYASA 292 (569)
Q Consensus 272 ~v~~~~---~~G~y~l~~~~~~~~ 292 (569)
+++++. ++|.|++|||.++..
T Consensus 455 ~~~f~~~~~~~G~~m~HCH~l~He 478 (488)
T 3od3_A 455 LVKFNHDAPKEHAYMAHCHLLEHE 478 (488)
T ss_dssp EECBCSCCCGGGCEEEEESSHHHH
T ss_pred EEEeccCCCCCCCEEEeCCchHHH
Confidence 999974 468999999987643
No 64
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.62 E-value=8.8e-15 Score=154.05 Aligned_cols=213 Identities=15% Similarity=0.161 Sum_probs=144.9
Q ss_pred eeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CceeEee--ec-----ccccCCCCCCCCCC-----cccccCCCCC
Q 008351 42 RQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESP-YNITIHW--HG-----IFQLLSPWADGPNM-----ITQCPITPGR 108 (569)
Q Consensus 42 ~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~-~~~~iH~--HG-----~~~~~~~~~DG~~~-----~tq~~i~pG~ 108 (569)
.....+++||+. .|+|++++| ++|+||+|... ....+|+ +| +.+... ||.+- +....|.|||
T Consensus 167 ~~~~~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~---DG~~~~~P~~~~~l~l~pge 241 (448)
T 3aw5_A 167 FLGNAVLVNGVK-DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAV---DQGFLARPIEVRALFLAPAE 241 (448)
T ss_dssp CCCSEEEETTEE-TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEE---TTEEEEEEEEESCEEECTTC
T ss_pred ccccEEEECCcc-cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEe---CCCccCCceEeceEEECCcc
Confidence 345789999996 699999999 99999999975 4677888 44 555554 99642 3346799999
Q ss_pred eeEEEEEeCCCCcceeEecchhhhhc----cc----------eee--EEEeCCCCC--CCCC---C----CCCCceeEEe
Q 008351 109 SYTYKFNVINQEGTLWWHGHVSLLRA----TV----------YGA--LIIRPKSGH--EYPY---P----KPDKEVPILL 163 (569)
Q Consensus 109 ~~~y~~~~~~~~Gt~wYH~H~~~~~~----Gl----------~G~--liV~~~~~~--~~~~---~----~~d~e~~l~l 163 (569)
|++..+++ . .+.||..++...... ++ ... +.+...... +..+ + ....+..+.|
T Consensus 242 R~dvlv~~-~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l 319 (448)
T 3aw5_A 242 RAEVVVEL-G-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFAL 319 (448)
T ss_dssp EEEEEEEE-C-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEE
T ss_pred eEEEEEEC-C-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEE
Confidence 99999998 4 478898876432100 01 111 222111110 0000 0 0011112222
Q ss_pred eeeeccCHHHHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEE-EEcCcEEEEEEEecCCCCeEEEEEeCce
Q 008351 164 GEWWNANVVDVENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLK-VVEGKTYLLRIINAALNNQLFFKIANHK 242 (569)
Q Consensus 164 ~d~~~~~~~~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~-v~~G~~~rlRliN~~~~~~~~~~i~gh~ 242 (569)
.. + ...|+|||+.+.. ..+.+. ++.|++++|+|.|.+....|+||||||.
T Consensus 320 ~~----------------~-----~~~~~iNg~~~~~--------~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~ 370 (448)
T 3aw5_A 320 SL----------------S-----GMQWTINGMFWNA--------SNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFP 370 (448)
T ss_dssp EE----------------E-----TTEEEETTBCCCT--------TCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSC
T ss_pred eC----------------C-----CceeeECCCcCCC--------CCCceeccCCCCeEEEEEEcCCCCCCcCEEECCce
Confidence 10 0 1258999997631 234566 8999999999999984455999999999
Q ss_pred eEEEEecCCCC------------Cc---eEeeEEEEcCCcEEEEEEEeC----CCCceeEEEeeecccC
Q 008351 243 FTVVSVDASYT------------DP---YVTDVVVIAPGQTTDVLLKAD----QPVGSYYMAARAYASA 292 (569)
Q Consensus 243 ~~via~DG~~~------------~p---~~~d~v~l~pgeR~dv~v~~~----~~~G~y~l~~~~~~~~ 292 (569)
|+|++.+|... .| .+.|++.+.||+++.|.+++. .+| |.+|||.....
T Consensus 371 F~Vl~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~ 437 (448)
T 3aw5_A 371 MWIIERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHE 437 (448)
T ss_dssp BEEEEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHH
T ss_pred EEEEEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHH
Confidence 99999999764 23 589999999999999996664 256 99999997654
No 65
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.61 E-value=5.8e-14 Score=151.95 Aligned_cols=248 Identities=12% Similarity=0.101 Sum_probs=149.2
Q ss_pred eEEEEEcCCCC--------CCeEEEecCCEEEEEEEeCCCC-ceeEeeecccccCCCCCCCCC----CcccccCCCCCee
Q 008351 44 RVITAVNGRLP--------GPTIRVHEGDTLVVHVFNESPY-NITIHWHGIFQLLSPWADGPN----MITQCPITPGRSY 110 (569)
Q Consensus 44 ~~~~~~NG~~P--------gP~i~~~~Gd~v~i~l~N~l~~-~~~iH~HG~~~~~~~~~DG~~----~~tq~~i~pG~~~ 110 (569)
...++|||+.. -|+|++++|+++|+||+|.... ...+|++|..+.-.. .||.+ .+....|.||||+
T Consensus 195 ~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR~ 273 (559)
T 2q9o_A 195 SDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQRY 273 (559)
T ss_dssp BSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEE
T ss_pred cceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEEE
Confidence 45789999973 3799999999999999999754 556777666443222 49976 2344679999999
Q ss_pred EEEEEeCCCCcceeEecch--hhh---hc-cceeeEEEeCCCCCCCCCCC----CC----Cc---eeEEeeeeeccC-HH
Q 008351 111 TYKFNVINQEGTLWWHGHV--SLL---RA-TVYGALIIRPKSGHEYPYPK----PD----KE---VPILLGEWWNAN-VV 172 (569)
Q Consensus 111 ~y~~~~~~~~Gt~wYH~H~--~~~---~~-Gl~G~liV~~~~~~~~~~~~----~d----~e---~~l~l~d~~~~~-~~ 172 (569)
+..+++++.+|.||..... ... .. ....+++.........|... .+ .+ .++.-.+..... ..
T Consensus 274 dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~~ 353 (559)
T 2q9o_A 274 DVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFVK 353 (559)
T ss_dssp EEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCCC
T ss_pred EEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCccccc
Confidence 9999985567999998865 211 11 11123333322111111000 00 00 000000000000 00
Q ss_pred HHHHHH-HhcCCCCCCCceEEEcCcCCCCCCCCC-----------CCCcceEEEEEcCcEEEEEEEecCC----CCeEEE
Q 008351 173 DVENQA-QITGGAPNISDAYTINGKPGDLYPCSQ-----------NPNQIYKLKVVEGKTYLLRIINAAL----NNQLFF 236 (569)
Q Consensus 173 ~~~~~~-~~~g~~~~~~~~~liNG~~~~~~~~~~-----------~~~~~~~~~v~~G~~~rlRliN~~~----~~~~~~ 236 (569)
...... ............++|||+++....-.+ -+.....+.++.++.+++.++|... ...|+|
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~ 433 (559)
T 2q9o_A 354 RPDNTLPVALDLTGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPM 433 (559)
T ss_dssp CGGGEEEEEEECSSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCEEE
T ss_pred ceeEEEEEEeecCCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCCcE
Confidence 000000 000000012346899999763210000 0011235778777777766676643 456999
Q ss_pred EEeCceeEEEEecC---------CCC------------CceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCC
Q 008351 237 KIANHKFTVVSVDA---------SYT------------DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAP 293 (569)
Q Consensus 237 ~i~gh~~~via~DG---------~~~------------~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~ 293 (569)
|||||.|+|++.++ +.. .|...|++.|.+++++.|.++++ +||.|.+|||......
T Consensus 434 HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG~W~~HCHil~H~~ 510 (559)
T 2q9o_A 434 HLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPGAWLFHCHIAWHVS 510 (559)
T ss_dssp EESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCEEEEEEECCHHHHH
T ss_pred EECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCeeEEEEecchhHhh
Confidence 99999999999987 321 47789999999999999999998 8999999999976543
No 66
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.61 E-value=3.6e-14 Score=153.63 Aligned_cols=235 Identities=20% Similarity=0.184 Sum_probs=149.4
Q ss_pred eeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CceeEeeec---------ccccCCCCCCCCCC-----cc------c
Q 008351 43 QRVITAVNGRLPGPTIRVHEGDTLVVHVFNESP-YNITIHWHG---------IFQLLSPWADGPNM-----IT------Q 101 (569)
Q Consensus 43 ~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~-~~~~iH~HG---------~~~~~~~~~DG~~~-----~t------q 101 (569)
....+++||+. .|.|.|++| ++|+||+|... ....+++.| +.++.. ||.+. +. .
T Consensus 253 ~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~---DG~~l~~P~~~~~~~~~~~ 327 (612)
T 2g23_A 253 FGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGS---DGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEE---TTEEEEEEEEECSSSSSSS
T ss_pred cCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEe---CCeEccCCEEecccCcccE
Confidence 45678999996 699999999 99999999964 455666655 345554 99642 23 5
Q ss_pred ccCCCCCeeEEEEEeCCCCcc-eeEecchhhhhcc-----------ceeeEEEeCCC-CC--CCCC--C----CC--C--
Q 008351 102 CPITPGRSYTYKFNVINQEGT-LWWHGHVSLLRAT-----------VYGALIIRPKS-GH--EYPY--P----KP--D-- 156 (569)
Q Consensus 102 ~~i~pG~~~~y~~~~~~~~Gt-~wYH~H~~~~~~G-----------l~G~liV~~~~-~~--~~~~--~----~~--d-- 156 (569)
..|.||||++..+++.+.+|+ ++...-......| ..--+.|.... .. ..|. . .. +
T Consensus 328 l~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~ 407 (612)
T 2g23_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCcccc
Confidence 679999999999998655674 6666543211111 11224454332 11 1111 0 00 0
Q ss_pred -CceeEEee------------eeeccCHHHHHHHHH-h-cC-----CCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEE
Q 008351 157 -KEVPILLG------------EWWNANVVDVENQAQ-I-TG-----GAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVV 216 (569)
Q Consensus 157 -~e~~l~l~------------d~~~~~~~~~~~~~~-~-~g-----~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~ 216 (569)
....+++. -|....... ..... . .+ ........++|||+.+ ...+.+.++
T Consensus 408 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~---------~~~~~~~v~ 477 (612)
T 2g23_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVED-PADVQVPAEGVIQVTGADGRTKTYRRTAATF---------NDGLGFTIG 477 (612)
T ss_dssp CEEEEEEECCTTCTTSTTCCCEEEEEEEC------CCSCTTEEEEECTTSCEEEEEEEECST---------TSCCCEEEE
T ss_pred cceeEEeeccccccccccccceeecccccc-ccccccccccceeeeccCCceeEEEECCccC---------CCCCceEec
Confidence 01112221 011000000 00000 0 00 0001123688999966 345789999
Q ss_pred cCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCC------------------------CC---CceEeeEEEEcCCcEE
Q 008351 217 EGKTYLLRIINAALNNQLFFKIANHKFTVVSVDAS------------------------YT---DPYVTDVVVIAPGQTT 269 (569)
Q Consensus 217 ~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~------------------------~~---~p~~~d~v~l~pgeR~ 269 (569)
.|++++|+|+|.+.. .|+||||||.|+|++.+|. .+ ++.+.|++.|.|||++
T Consensus 478 ~G~~v~w~l~N~~~~-~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~ 556 (612)
T 2g23_A 478 EGTHEQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGL 556 (612)
T ss_dssp TTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEE
T ss_pred CCCEEEEEEEeCCCC-CCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEE
Confidence 999999999999844 5999999999999987532 11 2347899999999999
Q ss_pred EEEEEeCCCCceeEEEeeecccCC
Q 008351 270 DVLLKADQPVGSYYMAARAYASAP 293 (569)
Q Consensus 270 dv~v~~~~~~G~y~l~~~~~~~~~ 293 (569)
.|.++++..+|.|.+|||......
T Consensus 557 ~i~~~~~~~pG~w~~HCHil~Hed 580 (612)
T 2g23_A 557 RVMGKFDGAYGRFMYHCHLLEHED 580 (612)
T ss_dssp EEEEECCSCCEEEEEEESSHHHHT
T ss_pred EEEEEeCCCCccEEEEeCchhHhh
Confidence 999999978999999999976543
No 67
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.57 E-value=6.6e-15 Score=157.93 Aligned_cols=230 Identities=14% Similarity=0.090 Sum_probs=147.5
Q ss_pred eeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCC-ceeEeeecc---cccCCCCCCCCCC-----cccccCCCCCeeEEE
Q 008351 43 QRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPY-NITIHWHGI---FQLLSPWADGPNM-----ITQCPITPGRSYTYK 113 (569)
Q Consensus 43 ~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~-~~~iH~HG~---~~~~~~~~DG~~~-----~tq~~i~pG~~~~y~ 113 (569)
....+++||+. .|.|.++.| ++|+||+|.... ...+|+.|. .+.. .||.+- +....|.||||++..
T Consensus 229 ~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via---~DG~~~~~P~~~~~l~l~pgeR~dvl 303 (513)
T 2wsd_A 229 CGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIG---SDGGLLPRSVKLNSFSLAPAERYDII 303 (513)
T ss_dssp CCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEE---ETTEEEEEEEEESEEEECTTCEEEEE
T ss_pred ccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEc---cCCCcccCceEeCeEEECCeeeEEEE
Confidence 35689999996 699999885 999999999754 467777554 4454 499531 345779999999999
Q ss_pred EEeCCCCcceeE-ecchh--hhhc-cc-eeeEEEeCCC--C----CCCC--CCC--------CCCceeEEeeeeeccCHH
Q 008351 114 FNVINQEGTLWW-HGHVS--LLRA-TV-YGALIIRPKS--G----HEYP--YPK--------PDKEVPILLGEWWNANVV 172 (569)
Q Consensus 114 ~~~~~~~Gt~wY-H~H~~--~~~~-Gl-~G~liV~~~~--~----~~~~--~~~--------~d~e~~l~l~d~~~~~~~ 172 (569)
+++++.+|.++. ..-.. +... .. ...+...... . ...| +.. .+.+..+.|....
T Consensus 304 v~~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~~~----- 378 (513)
T 2wsd_A 304 IDFTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAGTQ----- 378 (513)
T ss_dssp EECGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEEEE-----
T ss_pred EECCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEeec-----
Confidence 998555687332 21111 0000 11 1222222111 0 0011 000 0001111121100
Q ss_pred HHHHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCC-
Q 008351 173 DVENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDAS- 251 (569)
Q Consensus 173 ~~~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~- 251 (569)
. ......++|||+.+. ....+.++.|++++|+|.|.+.. .|+||||||.|+|++.+|.
T Consensus 379 ---------~--~~g~~~~~iNg~~~~---------~~~~~~~~~g~~~~w~l~N~~~~-~HP~HlHG~~F~Vl~~~~~~ 437 (513)
T 2wsd_A 379 ---------D--EYGRPVLLLNNKRWH---------DPVTETPKVGTTEIWSIINPTRG-THPIHLHLVSFRVLDRRPFD 437 (513)
T ss_dssp ---------C--TTSCEEEEETTBCTT---------SCCCBCCBTTCEEEEEEEECSSS-CEEEEESSCCEEEEEEEEBC
T ss_pred ---------C--CCCCceEeECCccCC---------CcccEecCCCCEEEEEEEcCCCC-CcCEeEeCceEEEEEecCcc
Confidence 0 001125789999652 23457889999999999999854 5999999999999998762
Q ss_pred --------------C-C-----CceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEc
Q 008351 252 --------------Y-T-----DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYD 309 (569)
Q Consensus 252 --------------~-~-----~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~ 309 (569)
+ . .+.+.|++.|.||+++.|.++++.+||.|.+|||...... .++.+.+++.
T Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~------~GMm~~~~V~ 509 (513)
T 2wsd_A 438 IARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHED------YDMMRPMDIT 509 (513)
T ss_dssp HHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHT------TTCEEEEEEB
T ss_pred cccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhh------cCCceeEEEe
Confidence 1 0 2358899999999999999999658999999999976543 1355666654
No 68
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.55 E-value=5.8e-14 Score=150.72 Aligned_cols=241 Identities=15% Similarity=0.076 Sum_probs=149.2
Q ss_pred eeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCC-CceeEeeec---------ccccCCCCCCCCC-----CcccccCCCC
Q 008351 43 QRVITAVNGRLPGPTIRVHEGDTLVVHVFNESP-YNITIHWHG---------IFQLLSPWADGPN-----MITQCPITPG 107 (569)
Q Consensus 43 ~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~-~~~~iH~HG---------~~~~~~~~~DG~~-----~~tq~~i~pG 107 (569)
....+++||+. .|.|.++.| ++|+||+|... ....++++| +.+... ||.. .+....|.||
T Consensus 200 ~gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa~---DG~~~~~P~~~~~l~l~pg 274 (534)
T 3abg_A 200 WGDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIAS---DSGLLEHPADTSLLYISMA 274 (534)
T ss_dssp CCSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEEE---TTEEEEEEEEESCEEECTT
T ss_pred cCceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEEEEEe---CCCcccCceEeceEEECCc
Confidence 35689999985 799999985 99999999975 455777754 455554 9853 2345779999
Q ss_pred CeeEEEEEeCCCCc-ceeEecchhhhh------c--cceeeEEEeCCCCC----CCCCCCCCCceeEEeeeeeccCHHHH
Q 008351 108 RSYTYKFNVINQEG-TLWWHGHVSLLR------A--TVYGALIIRPKSGH----EYPYPKPDKEVPILLGEWWNANVVDV 174 (569)
Q Consensus 108 ~~~~y~~~~~~~~G-t~wYH~H~~~~~------~--Gl~G~liV~~~~~~----~~~~~~~d~e~~l~l~d~~~~~~~~~ 174 (569)
||++..+++.+.+| +||......... . ...+.+-....... ....+....... ..+-......
T Consensus 275 eR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~L~~~~--~p~~~~~~~~-- 350 (534)
T 3abg_A 275 ERYEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVP--FPSPTTNTPR-- 350 (534)
T ss_dssp CEEEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCCCCCCS--CCCCCCCCCE--
T ss_pred cEEEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccccccCC--CCCCccccce--
Confidence 99999999855577 588765321100 0 01122222211110 000000000000 0000000000
Q ss_pred HHHHHhcCCCCCCCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEe-cCC--
Q 008351 175 ENQAQITGGAPNISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSV-DAS-- 251 (569)
Q Consensus 175 ~~~~~~~g~~~~~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~-DG~-- 251 (569)
...-+ .....|+|||+.+... .....+.++.|++++|.|.|.+....|+||||||.|+|++. +|.
T Consensus 351 ---~~~~~---~~~~~w~iNG~~f~~~------~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~ 418 (534)
T 3abg_A 351 ---QFRFG---RTGPTWTINGVAFADV------QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNA 418 (534)
T ss_dssp ---EEECS---CCCSTTCCCCBTTBCT------TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSS
T ss_pred ---EEEEe---ccCceeEECCcccCCC------CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCc
Confidence 00000 0112578999965210 11234679999999999999986657999999999999998 664
Q ss_pred -CCCc---eEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccCCCCCCCCcceEEEEEEcC
Q 008351 252 -YTDP---YVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASAPQIPFDNTTTRGIVVYDG 310 (569)
Q Consensus 252 -~~~p---~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~~~~~~~~~~~~ail~y~~ 310 (569)
...+ ...|++.|.||+++.|.+.+..+||.|.+|||...... .++.+.+++..
T Consensus 419 ~~~~~~~~~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d------~GMm~~~~V~~ 475 (534)
T 3abg_A 419 RTVMPYESGLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHED------HDMMAAFNATV 475 (534)
T ss_dssp SCCCSGGGSCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHH------TTCEEEEEECS
T ss_pred CcCCccccCCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHh------cCCceEEEEEe
Confidence 1112 56899999999999999984338999999999976543 13556666654
No 69
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.51 E-value=6.7e-15 Score=123.07 Aligned_cols=90 Identities=21% Similarity=0.190 Sum_probs=70.3
Q ss_pred CCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCC--CCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecc
Q 008351 51 GRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLS--PWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGH 128 (569)
Q Consensus 51 G~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~--~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H 128 (569)
-++++|+|++++||+|+ ++|..+.++++||||...+.. ..+||.+ .+++.|.||++++|.|+++.++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 35778999999999975 679988999999999876531 0123332 345789999999999987568999999999
Q ss_pred hhhhhccceeeEEEeC
Q 008351 129 VSLLRATVYGALIIRP 144 (569)
Q Consensus 129 ~~~~~~Gl~G~liV~~ 144 (569)
.+. .+||.|.|+|++
T Consensus 91 ~H~-~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PHR-GAGMVGKITVEG 105 (105)
T ss_dssp TTG-GGTCEEEEEECC
T ss_pred Cch-hcCCEEEEEEcC
Confidence 543 349999999974
No 70
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.49 E-value=2.9e-12 Score=137.94 Aligned_cols=243 Identities=15% Similarity=0.085 Sum_probs=145.9
Q ss_pred eEEEEEcCCCC----------------CCeEEEecCCEEEEEEEeCCCC-ceeEeeecccccCCCCCCCCC----Ccccc
Q 008351 44 RVITAVNGRLP----------------GPTIRVHEGDTLVVHVFNESPY-NITIHWHGIFQLLSPWADGPN----MITQC 102 (569)
Q Consensus 44 ~~~~~~NG~~P----------------gP~i~~~~Gd~v~i~l~N~l~~-~~~iH~HG~~~~~~~~~DG~~----~~tq~ 102 (569)
...++|||+.. .++|.+++|+++|+||+|.... ...++.+|..+.-.. .||.+ .+...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa-~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIA-NDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEE-eCCccCCceEeeEE
Confidence 45688999742 3799999999999999999643 445555555433222 49975 23446
Q ss_pred cCCCCCeeEEEEEeCCCCcceeEecchhhh-----hccceeeEEEeCCCCCCCCCCCC--CCceeEEeee--eeccC--H
Q 008351 103 PITPGRSYTYKFNVINQEGTLWWHGHVSLL-----RATVYGALIIRPKSGHEYPYPKP--DKEVPILLGE--WWNAN--V 171 (569)
Q Consensus 103 ~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~-----~~Gl~G~liV~~~~~~~~~~~~~--d~e~~l~l~d--~~~~~--~ 171 (569)
.|.||||++..+++++..|.||........ ..+..-+|+.........|.... +.+. .+.+ ..... .
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~--~~~~~~~~L~P~~~ 381 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGT--CEDEPVASLVPHLA 381 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCCCCC--SCCSCGGGCCBSSC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCccch--hhcccccccccCCC
Confidence 799999999999996678999999875421 11222334444322111111000 0000 0000 00000 0
Q ss_pred HHHHHHH-----HhcCCCCCCCceEEEcCcCCCCCCCCC-----------CCCcceEEEE----EcCcEEEEEEEecCC-
Q 008351 172 VDVENQA-----QITGGAPNISDAYTINGKPGDLYPCSQ-----------NPNQIYKLKV----VEGKTYLLRIINAAL- 230 (569)
Q Consensus 172 ~~~~~~~-----~~~g~~~~~~~~~liNG~~~~~~~~~~-----------~~~~~~~~~v----~~G~~~rlRliN~~~- 230 (569)
....... ...+ ....-.+.|||.++....-.+ -+.....+.+ +.|++++|.|-|.+.
T Consensus 382 ~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~ 459 (580)
T 3sqr_A 382 LDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGF 459 (580)
T ss_dssp CBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSS
T ss_pred CCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCcc
Confidence 0000000 0000 011235779998653100000 0011123344 459999999999872
Q ss_pred CCeEEEEEeCceeEEEEecCC------------CCCceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccC
Q 008351 231 NNQLFFKIANHKFTVVSVDAS------------YTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASA 292 (569)
Q Consensus 231 ~~~~~~~i~gh~~~via~DG~------------~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~ 292 (569)
...|+||||||.|+||+.+.+ +..|...|++.+.+++.+.|.++++ +||.|.+|||.....
T Consensus 460 ~~~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG~W~~HCHi~~H~ 532 (580)
T 3sqr_A 460 GIWHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPGSWLLHCHIAWHA 532 (580)
T ss_dssp CCCEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCEEEEEEECSHHHH
T ss_pred ccceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcC-CCeeeEEEECcHHHh
Confidence 246999999999999998432 2358899999999999999999999 999999999986544
No 71
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.42 E-value=5.5e-13 Score=112.65 Aligned_cols=104 Identities=20% Similarity=0.136 Sum_probs=80.0
Q ss_pred EEEEEEEEEEe-----ccCceeeEE-EEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcc
Q 008351 27 EHSFHVKNLTI-----GRLCRQRVI-TAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMIT 100 (569)
Q Consensus 27 ~~~l~~~~~~~-----~~~g~~~~~-~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~t 100 (569)
+|.+.+.+... ..+|..... .++|++++++.|++++||+|+++++|.... +||+.... .|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~-----~H~~~i~~----~~~---- 69 (112)
T 1iby_A 3 NFNVVINAYDTTIPELNVEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPI-----SEGFSIDA----FGV---- 69 (112)
T ss_dssp CEEEEEEEEEEEEEEEEETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSS-----CEEEEEGG----GTE----
T ss_pred ceeEEEEeccCccccEEeccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCC-----eEEEEEcC----CCc----
Confidence 45555555443 233555555 489999988999999999999999999755 66665543 232
Q ss_pred cccCCCCCeeEEEEEeCCCCcceeEecchhhhhccceeeEEEeC
Q 008351 101 QCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRATVYGALIIRP 144 (569)
Q Consensus 101 q~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 144 (569)
+..+.||++++|.|++ .++|+||||||.+....+|.|.|+|.+
T Consensus 70 ~~~i~pG~~~~~~f~~-~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 70 QEVIKAGETKTISFTA-DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp EEEECTTCEEEEEEEC-CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred eeEeCCCCEEEEEEEC-CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 3579999999999998 899999999998876556999999964
No 72
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.40 E-value=8.7e-12 Score=137.35 Aligned_cols=94 Identities=18% Similarity=0.134 Sum_probs=76.7
Q ss_pred ceEEEcCcCCCCCCCCCCCCcceEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCC---------------
Q 008351 189 DAYTINGKPGDLYPCSQNPNQIYKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYT--------------- 253 (569)
Q Consensus 189 ~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~--------------- 253 (569)
..+.+||+.+ .....+.++.|++++|.|.|.+... |+||||||.|+||+.+|...
T Consensus 459 ~~~~~n~~~~---------~~~~~~~~~~g~~~~w~i~N~~~~~-HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~ 528 (612)
T 3gyr_A 459 KTYRRTARTF---------NDGLGFTIGEGTHEQWTFLNLSPIL-HPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVR 528 (612)
T ss_dssp EEEEEEECST---------TSCCCEEEETTCEEEEEEEECSSSC-EEEEESSCEEEEEEEEEEECTTEETTTTEESSCEE
T ss_pred ccccccCccC---------CCCcceEeCCCCEEEEEEEcCCCCC-cCEeECCCcEEEEeecCCcCccccccccccccccc
Confidence 3567788744 2345788999999999999998654 99999999999999876421
Q ss_pred ------------CceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecccC
Q 008351 254 ------------DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYASA 292 (569)
Q Consensus 254 ------------~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~~~ 292 (569)
++.+.|++.|.+|+.+.|.+++..+||.|.+|||.+...
T Consensus 529 ~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~He 579 (612)
T 3gyr_A 529 LDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHE 579 (612)
T ss_dssp EEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHH
T ss_pred cccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHH
Confidence 233579999999999999999655899999999997654
No 73
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.36 E-value=1.8e-12 Score=115.44 Aligned_cols=99 Identities=17% Similarity=0.230 Sum_probs=72.5
Q ss_pred CceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCC------CCcc-cccCCCCC--ee
Q 008351 40 LCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGP------NMIT-QCPITPGR--SY 110 (569)
Q Consensus 40 ~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~------~~~t-q~~i~pG~--~~ 110 (569)
.+...+.+.++|. ++|+|++++||+|+|+++|... ...|.+.+...+.++.+.. ++.. ...|.||+ +.
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3566666777877 6899999999999999999732 3356666665444432210 0000 02689999 99
Q ss_pred EEEEEeCCCCcceeEecchhhhhc-cceeeEEEe
Q 008351 111 TYKFNVINQEGTLWWHGHVSLLRA-TVYGALIIR 143 (569)
Q Consensus 111 ~y~~~~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~ 143 (569)
+|.|++ ++|+||||||..+... ||+|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999996 8999999999877765 999999984
No 74
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.20 E-value=3.7e-11 Score=128.15 Aligned_cols=96 Identities=20% Similarity=0.231 Sum_probs=75.9
Q ss_pred CceeeEEEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCC
Q 008351 40 LCRQRVITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQ 119 (569)
Q Consensus 40 ~g~~~~~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~ 119 (569)
++....+|++|+++|+|.|++++||+|+++|+|.....-. +||+.+.. .|+ +..+.||++++|.|++ .+
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta-~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVA-AN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEEC-CS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEEC-CC
Confidence 4578889999999999999999999999999998653111 46666543 233 2579999999999998 89
Q ss_pred CcceeEecchh-hhh-ccceeeEEEeCCC
Q 008351 120 EGTLWWHGHVS-LLR-ATVYGALIIRPKS 146 (569)
Q Consensus 120 ~Gt~wYH~H~~-~~~-~Gl~G~liV~~~~ 146 (569)
+|+||||||.. +.. .||+|.|+|++++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 99999999942 111 2999999999764
No 75
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.15 E-value=4.8e-11 Score=104.80 Aligned_cols=95 Identities=20% Similarity=0.168 Sum_probs=71.3
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCC-CCCeeeecCcEEEEE------eCcC---cCCcccccccccCCCCCccceEEeCCC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVE-NHPIHIHGFDFHVLA------QGFG---NYNAARDIKKFNLVNPQRRNTIAVPVG 514 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~-~HP~HlHG~~F~Vl~------~g~g---~~~~~~~~~~~~~~~p~~rDTv~vp~~ 514 (569)
..+.++.|++|+|++.|.+. . .|.||+|+....+.. ...+ .+.+. -....++|+..|.|+
T Consensus 35 ~~i~v~~G~~V~~~~~N~~~---~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~-------~~~~~~~~t~~l~pG 104 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNSA---VQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA-------DKSNIIAESPLANGN 104 (139)
T ss_dssp SEEEECTTCEEEEEEECCCS---SCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS-------CCTTEEEECCCBCTT
T ss_pred CeEEECCCCEEEEEEEeCCC---CCCeeEEEeccccccchhhhhhhhcccccccccCc-------ccccccccccccCCC
Confidence 45678999999999999764 6 899999986431100 0000 01110 012347899999999
Q ss_pred cEEEEEEEeCCceeEEEeeccccccccccEEEEEEe
Q 008351 515 GWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 515 g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
+...|.|.+++||.|.||||+..|.+ ||+..|+|.
T Consensus 105 et~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 105 ETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred CEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 99999999999999999999999999 999999883
No 76
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.12 E-value=2.1e-10 Score=95.32 Aligned_cols=79 Identities=18% Similarity=0.312 Sum_probs=62.5
Q ss_pred cCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecch
Q 008351 50 NGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHV 129 (569)
Q Consensus 50 NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~ 129 (569)
+..+..+.|++++||+|++ .|..+.++++|+++. +||.....+..+.||++++|.| .++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 4455568999999999654 699888889998862 2665544445689999998888 579999999987
Q ss_pred hhhhccceeeEEEe
Q 008351 130 SLLRATVYGALIIR 143 (569)
Q Consensus 130 ~~~~~Gl~G~liV~ 143 (569)
|. ||.|.|+|+
T Consensus 95 H~---gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP---FMRGKVVVE 105 (105)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 64 999999984
No 77
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.11 E-value=1.5e-10 Score=96.34 Aligned_cols=86 Identities=20% Similarity=0.181 Sum_probs=65.5
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEe-
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQA- 523 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a- 523 (569)
..+.++.|++|+|+ |... ..|++|+||..+... .|. . .+....++..++||+...++|.+
T Consensus 19 ~~i~v~~Gd~V~~~--N~~~---~~H~v~~~~~~~~~~---~g~-----~------~~~~~~~~~~i~pG~~~~~~f~~~ 79 (105)
T 3cvb_A 19 ANVTVHPGDTVKWV--NNKL---PPHNILFDDKQVPGA---SKE-----L------ADKLSHSQLMFSPGESYEITFSSD 79 (105)
T ss_dssp SEEEECTTEEEEEE--ECSS---CCEEEEECTTSSGGG---CHH-----H------HHHHCEEEEECSTTCEEEEEECTT
T ss_pred CEEEEcCCCEEEEE--ECCC---CCCeEEEeCCCCCcc---ccc-----c------cccccccccccCCCCeEEEEEecC
Confidence 45789999999874 6543 789999999765320 000 0 00112578899999999999998
Q ss_pred CCceeEEEeeccccccccccEEEEEEec
Q 008351 524 NNPGVWFVHCHLDVHLPWGLATAFVVEN 551 (569)
Q Consensus 524 dnpG~w~~HCHil~H~d~GM~~~~~V~~ 551 (569)
+.+|.|.|||| .|..+||++.+.|.+
T Consensus 80 ~~~G~y~y~C~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 80 FPAGTYTYYCA--PHRGAGMVGKITVEG 105 (105)
T ss_dssp SCSEEEEEECT--TTGGGTCEEEEEECC
T ss_pred CCCeeEEEEeC--CchhcCCEEEEEEcC
Confidence 79999999999 799999999999863
No 78
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.90 E-value=2e-09 Score=89.57 Aligned_cols=82 Identities=15% Similarity=0.195 Sum_probs=59.6
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCC----CcccccCCCCCeeEEEEEeCCCCcceeEecchhh
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPN----MITQCPITPGRSYTYKFNVINQEGTLWWHGHVSL 131 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~----~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~ 131 (569)
+.|++++||+|++ .|....++++|.|+...+. .+|.. ......+.||++++|.|+++.++|+||||||.|
T Consensus 20 ~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~~H- 93 (106)
T 2gim_A 20 AKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCEPH- 93 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECTTT-
T ss_pred CEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeCCh-
Confidence 7999999999755 5887677888888754322 12310 011235899999999998657899999999933
Q ss_pred hhccceeeEEEe
Q 008351 132 LRATVYGALIIR 143 (569)
Q Consensus 132 ~~~Gl~G~liV~ 143 (569)
..+||.|.|+|.
T Consensus 94 ~~~GM~G~i~V~ 105 (106)
T 2gim_A 94 RGAGMVGKITVA 105 (106)
T ss_dssp GGGTCEEEEEEC
T ss_pred hhcCcEEEEEEc
Confidence 234999999996
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.81 E-value=1.7e-08 Score=88.31 Aligned_cols=90 Identities=12% Similarity=0.091 Sum_probs=64.2
Q ss_pred CCCCeEEEecCCEEEEEEEeCCCC-ceeEeeeccccc--------------CCCCC-CCCCC--cccccCCCCCeeEEEE
Q 008351 53 LPGPTIRVHEGDTLVVHVFNESPY-NITIHWHGIFQL--------------LSPWA-DGPNM--ITQCPITPGRSYTYKF 114 (569)
Q Consensus 53 ~PgP~i~~~~Gd~v~i~l~N~l~~-~~~iH~HG~~~~--------------~~~~~-DG~~~--~tq~~i~pG~~~~y~~ 114 (569)
|--+.|++++||+|+++|+|.... .++++.|+.... ...+. ++.+. .....|.||+++++.|
T Consensus 32 F~p~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f 111 (139)
T 2aan_A 32 FDKTELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTF 111 (139)
T ss_dssp BSCSEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEE
T ss_pred EcCCeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEE
Confidence 334799999999999999999766 788887764210 00000 11110 0112489999999999
Q ss_pred EeCCCCcceeEecchhhhhccceeeEEEe
Q 008351 115 NVINQEGTLWWHGHVSLLRATVYGALIIR 143 (569)
Q Consensus 115 ~~~~~~Gt~wYH~H~~~~~~Gl~G~liV~ 143 (569)
++ .++|+|+||||..+...||.|.|+|.
T Consensus 112 ~~-~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 112 TA-PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp EC-CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred EC-CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 98 79999999999766544999999984
No 80
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.81 E-value=1.3e-08 Score=84.68 Aligned_cols=85 Identities=19% Similarity=0.212 Sum_probs=62.8
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEe-
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQA- 523 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a- 523 (569)
..+.++.|++|+|+ |.+. ..|.+|+|+..+.. . .|. +... ..+|++.+.||+...+.|.+
T Consensus 20 ~~i~v~~Gd~V~~~--n~~~---~~H~~~~~~~~~~~--~-~g~-----~~~~------~~~~~~~~~pG~~~~~~f~~~ 80 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNKV---PPHNVVFDAALNPA--K-SAD-----LAKS------LSHKQLLMSPGQSTSTTFPAD 80 (106)
T ss_dssp SEEEECTTCEEEEE--ECSS---SCCCBEECSSSSTT--C-CHH-----HHHH------HCBCSCCCSTTCEEEEECCTT
T ss_pred CEEEECCCCEEEEE--ECCC---CCceEEEeCCCCcc--c-ccc-----cchh------ccccceeeCCCCEEEEEEecC
Confidence 45688999999886 5542 68999999764310 0 000 0000 11477889999999998887
Q ss_pred CCceeEEEeeccccccccccEEEEEEe
Q 008351 524 NNPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 524 dnpG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
+.||.|.|||| .|.++||.+.+.|.
T Consensus 81 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 81 APAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 89999999999 89999999999985
No 81
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.80 E-value=9.6e-09 Score=88.86 Aligned_cols=79 Identities=15% Similarity=0.259 Sum_probs=55.6
Q ss_pred cCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecch
Q 008351 50 NGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHV 129 (569)
Q Consensus 50 NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~ 129 (569)
+..|-.+.|++++||+|++ .|....++++++.... +|........+.||++++|.| .++|+|+|+|-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 4444347999999999765 5887666666654321 222222223588999999888 578999999976
Q ss_pred hhhhccceeeEEEe
Q 008351 130 SLLRATVYGALIIR 143 (569)
Q Consensus 130 ~~~~~Gl~G~liV~ 143 (569)
|. ||.|.|+|+
T Consensus 122 H~---gM~G~I~V~ 132 (132)
T 3c75_A 122 HP---FMRGKVIVE 132 (132)
T ss_dssp CT---TCEEEEEEC
T ss_pred Cc---CCEEEEEEC
Confidence 53 999999984
No 82
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.73 E-value=3.8e-08 Score=80.82 Aligned_cols=79 Identities=13% Similarity=0.127 Sum_probs=61.2
Q ss_pred cCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecch
Q 008351 50 NGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHV 129 (569)
Q Consensus 50 NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~ 129 (569)
|..|--..|++++||+|++.++|.....+++...++... ..+.||++.+|.|+. .++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~~ 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICRY 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECTT
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECcc
Confidence 344433689999999999999999776666655544221 247899999999997 999999999975
Q ss_pred hhhhccceeeEEEe
Q 008351 130 SLLRATVYGALIIR 143 (569)
Q Consensus 130 ~~~~~Gl~G~liV~ 143 (569)
|.. .||.|.|+|+
T Consensus 88 H~~-~gM~G~i~Ve 100 (100)
T 4hci_A 88 HLL-KGMEGKVIVK 100 (100)
T ss_dssp TGG-GTCEEEEEEC
T ss_pred ccC-CCCEEEEEEC
Confidence 422 3899999985
No 83
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.70 E-value=4.6e-08 Score=85.68 Aligned_cols=98 Identities=15% Similarity=0.150 Sum_probs=70.0
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCeeeecC--cEEEE-EeC--cC---cCCcccccccccCCCCCccceEEeCCCcEE
Q 008351 446 VKTLKFNSTVEIVLQNTALIAVENHPIHIHGF--DFHVL-AQG--FG---NYNAARDIKKFNLVNPQRRNTIAVPVGGWA 517 (569)
Q Consensus 446 ~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~--~F~Vl-~~g--~g---~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~ 517 (569)
.+.++.|++|+|++.|.+. +...|.||++.. ++.-+ ..+ .+ .|-+.. -....+++|..|.+|...
T Consensus 34 ~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~pG~~~ 106 (140)
T 1qhq_A 34 SLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNAGESG 106 (140)
T ss_dssp EEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCTTEEE
T ss_pred eEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCCCcee
Confidence 4688999999999999321 237999999843 11100 000 00 000000 011246789999999999
Q ss_pred EEEEEeCCceeEEEeeccccccccccEEEEEEe
Q 008351 518 VIRFQANNPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 518 ~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
.+.|.++.||.|.|||++..|...||.+.+.|.
T Consensus 107 ~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 107 SVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred EEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 999999999999999999999999999999986
No 84
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.61 E-value=1.4e-07 Score=77.06 Aligned_cols=80 Identities=25% Similarity=0.308 Sum_probs=59.3
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|++|+|+ |.+. ..|.+|+|+..+- + . .... ..+|+..+.||+...+.| +
T Consensus 19 ~~i~v~~G~~V~~~--n~~~---~~H~~~~~~~~~p----g------~-~~~~------~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNKL---SPHNIVFDADGVP----A------D-TAAK------LSHKGLLFAAGESFTSTF--T 74 (98)
T ss_dssp SEEEECTTCEEEEE--ECSS---CCEEEEECCSSSC----H------H-HHHH------HCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECCC---CCcEEEEeCCCCC----c------c-cccc------ccccccccCCCCEEEEEc--C
Confidence 35689999999987 5432 6899999864221 0 0 0000 115788999999887766 8
Q ss_pred CceeEEEeeccccccccccEEEEEEe
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
.||.|.|||| .|..+||.+.+.|+
T Consensus 75 ~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 75 EPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 9999999999 79999999999883
No 85
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.58 E-value=2.5e-07 Score=81.00 Aligned_cols=89 Identities=10% Similarity=0.049 Sum_probs=62.5
Q ss_pred CCeEEEecCCEEEEEEEe--CCCCceeEeeeccc------------ccC-CCCC--CCCCCc--ccccCCCCCeeEEEEE
Q 008351 55 GPTIRVHEGDTLVVHVFN--ESPYNITIHWHGIF------------QLL-SPWA--DGPNMI--TQCPITPGRSYTYKFN 115 (569)
Q Consensus 55 gP~i~~~~Gd~v~i~l~N--~l~~~~~iH~HG~~------------~~~-~~~~--DG~~~~--tq~~i~pG~~~~y~~~ 115 (569)
-+.|++++||+|+++++| .....++++.+... ... ..+. ++.+.+ ....|.||++.++.|+
T Consensus 32 P~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~ 111 (140)
T 1qhq_A 32 QTSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFR 111 (140)
T ss_dssp CSEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEE
T ss_pred CCeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEEE
Confidence 379999999999999999 66667777776311 000 0000 010000 0134899999999999
Q ss_pred eCCCCcceeEecchhhhhc-cceeeEEEeC
Q 008351 116 VINQEGTLWWHGHVSLLRA-TVYGALIIRP 144 (569)
Q Consensus 116 ~~~~~Gt~wYH~H~~~~~~-Gl~G~liV~~ 144 (569)
+ ..+|+|||||+..+... ||.|.|+|.|
T Consensus 112 ~-~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 112 T-PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp C-CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred e-CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 8 88999999999866554 9999999974
No 86
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.58 E-value=1.9e-07 Score=76.32 Aligned_cols=77 Identities=19% Similarity=0.305 Sum_probs=57.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCC----CcccccCCCCCeeEEEEEeCCCCcceeEecchhh
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPN----MITQCPITPGRSYTYKFNVINQEGTLWWHGHVSL 131 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~----~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~ 131 (569)
+.|++++||+|+ +.|....++++|+|+...+ +|.. ......+.||+++++.|. ++|+|+|||+.|
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p-----~~~~~~~~~~~~~~~~pG~~~~~tf~---~~G~y~y~C~~H- 86 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIP-----SGVNADAISRDDYLNAPGETYSVKLT---AAGEYGYYCEPH- 86 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSC-----TTCCHHHHCEEEEECSTTCEEEEECC---SCEEEEEECGGG-
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCC-----CccccccccccceecCCCCEEEEEeC---CCeEEEEEcCCc-
Confidence 789999999865 5788777899999986432 2211 011235899999988774 799999999943
Q ss_pred hhccceeeEEEe
Q 008351 132 LRATVYGALIIR 143 (569)
Q Consensus 132 ~~~Gl~G~liV~ 143 (569)
...||.|.|+|.
T Consensus 87 ~~~gM~G~i~V~ 98 (98)
T 2plt_A 87 QGAGMVGKIIVQ 98 (98)
T ss_dssp GGGTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 234999999984
No 87
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.54 E-value=2.2e-07 Score=75.81 Aligned_cols=81 Identities=20% Similarity=0.206 Sum_probs=59.6
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|++|+| .|.+. ..|.+|+|+..+- ..++ . ...++|+..+.||+...+.| +
T Consensus 18 ~~i~v~~G~~V~~--~n~~~---~~H~~~~~~~~~p------~~~~----~------~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNAG---FPHNIVFDEDAIP------SGVN----A------DAISRDDYLNAPGETYSVKL--T 74 (98)
T ss_dssp SEEEECTTCEEEE--EECSS---CCEEEEECGGGSC------TTCC----H------HHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECCC---CceEEEEeCCCCC------Cccc----c------ccccccceecCCCCEEEEEe--C
Confidence 4578999999998 45542 6899999874210 0000 0 00246889999999887755 6
Q ss_pred CceeEEEeeccccccccccEEEEEEe
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
.||.|.|||| .|.++||.+.+.|.
T Consensus 75 ~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 75 AAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp SCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 9999999999 79999999999883
No 88
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.53 E-value=2.5e-07 Score=74.35 Aligned_cols=73 Identities=25% Similarity=0.374 Sum_probs=57.0
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|++|+|+ |.+. ..|.+|+|+.. . ...++..+.||+...+.| +
T Consensus 19 ~~i~v~~Gd~V~~~--n~~~---~~H~v~~~~~~------------------~------~~~~~~~~~~g~~~~~~f--~ 67 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NNKL---APHNVVVEGQP------------------E------LSHKDLAFSPGETFEATF--S 67 (91)
T ss_dssp SEEEECTTCEEEEE--ECSS---CCEEEEETTCG------------------G------GCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECCC---CCcEEEEeCCC------------------c------cCcccceeCCCCEEEEEe--C
Confidence 45689999999986 5432 68999988620 0 124678889998777765 9
Q ss_pred CceeEEEeeccccccccccEEEEEEe
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
.||.|.|||| .|...||.+.+.|+
T Consensus 68 ~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 68 EPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCEEEEEEeC--CCccCCCEEEEEEC
Confidence 9999999999 89999999999873
No 89
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.46 E-value=4.4e-07 Score=74.03 Aligned_cols=80 Identities=16% Similarity=0.180 Sum_probs=55.0
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecchhhhhcc
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRAT 135 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 135 (569)
+.|++++||+|++ .|....+++++.++...++.. .++.. .....+.||+++++.| .++|+|+|||+.| ...|
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H-~~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPH-RGAG 90 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGG-TTTT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCc-cccC
Confidence 6899999998765 587667788888764322000 00000 1123589999999877 5799999999943 2249
Q ss_pred ceeeEEEe
Q 008351 136 VYGALIIR 143 (569)
Q Consensus 136 l~G~liV~ 143 (569)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999984
No 90
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.45 E-value=3.9e-07 Score=74.21 Aligned_cols=78 Identities=19% Similarity=0.322 Sum_probs=58.1
Q ss_pred EEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeCC
Q 008351 446 VKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQANN 525 (569)
Q Consensus 446 ~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 525 (569)
.+.++.|++|+|+ |.+. ..|.+++++..+ ..+ ... ..+++..+.||+...+.| +.
T Consensus 20 ~i~v~~G~~V~~~--n~~~---~~H~~~~~~~~~-----~~~-------~~~------~~~~~~~~~~g~~~~~tf--~~ 74 (97)
T 1b3i_A 20 ALSISAGDTVEFV--MNKV---GPHNVIFDKVPA-----GES-------APA------LSNTKLAIAPGSFYSVTL--GT 74 (97)
T ss_dssp EEEECTTCEEEEE--ECSS---CCCCBEEEECCT-----TSC-------HHH------HCBCCCCCSCSCCEEEEC--CS
T ss_pred EEEECCCCEEEEE--ECCC---CCeEEEEeCCCC-----ccc-------ccc------ccccceecCCCCEEEEEe--CC
Confidence 4688999999887 5432 689999986543 000 000 114677888888877765 89
Q ss_pred ceeEEEeeccccccccccEEEEEEe
Q 008351 526 PGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 526 pG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
||.|.|||+ .|.++||.+.+.|+
T Consensus 75 ~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 75 PGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp CSEEEEECS--STTTTTCEEEEEEC
T ss_pred CeEEEEEcc--ChhhcCCEEEEEEC
Confidence 999999999 89999999999873
No 91
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.41 E-value=1.2e-06 Score=73.37 Aligned_cols=75 Identities=20% Similarity=0.310 Sum_probs=58.3
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|+.|+|.+.|.+. ..|-|++... .-+..++||+...+.|.++
T Consensus 38 ~~i~v~~G~~V~~~~~n~d~---~~H~~~i~~~----------------------------~~~~~i~pG~~~~~~f~~~ 86 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKSP---ISEGFSIDAF----------------------------GVQEVIKAGETKTISFTAD 86 (112)
T ss_dssp CEEEEETTCEEEEEEEECSS---SCEEEEEGGG----------------------------TEEEEECTTCEEEEEEECC
T ss_pred CEEEEeCCCEEEEEEEECCC---CeEEEEEcCC----------------------------CceeEeCCCCEEEEEEECC
Confidence 45789999999999999753 3344333211 1256789999999999999
Q ss_pred CceeEEEeeccccccccccEEEEEEec
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVEN 551 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~~ 551 (569)
.||.|.||||+..|... |.+.++|++
T Consensus 87 ~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 87 KAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp SCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 99999999999888654 999998863
No 92
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.41 E-value=9e-07 Score=72.33 Aligned_cols=83 Identities=13% Similarity=0.131 Sum_probs=58.9
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|++|+| .|.+. ..|.+|+++..|- . + ++.. .. ...+|++.+.+|+...+.| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~~---~~H~~~~~~~~~p---~--g-~~~~--~~------~~~~~~~~~~~G~~~~~~f--~ 75 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAG---FPHNDLFDKKEVP---A--G-VDVT--KI------SMPEEDLLNAPGEEYSVTL--T 75 (99)
T ss_dssp SEEEECTTEEEEE--EECSS---CCBCCEECTTSSC---T--T-CCHH--HH------SCCTTCCBCSTTCEEEEEE--C
T ss_pred CEEEECCCCEEEE--EECCC---CcceEEEeCCCCc---c--c-cccc--cc------cccccceeeCCCCEEEEEe--C
Confidence 3568899999988 45543 6899999975430 0 0 0000 00 1125677889998877765 6
Q ss_pred CceeEEEeeccccccccccEEEEEEe
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
.||.|.|||+ .|.++||.+.+.|.
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 76 EKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCcEEEEEcC--CccccCCEEEEEEC
Confidence 9999999999 79999999999873
No 93
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.41 E-value=6.3e-07 Score=71.94 Aligned_cols=73 Identities=19% Similarity=0.303 Sum_probs=53.7
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecchhhhhcc
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRAT 135 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 135 (569)
+.|++++||+|++ .|....+++++.++... + + .....+.||+++++.| .++|+|||||+.+.. .|
T Consensus 19 ~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~~----~--~---~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H~~-~g 83 (91)
T 1bxv_A 19 STIEIQAGDTVQW--VNNKLAPHNVVVEGQPE----L--S---HKDLAFSPGETFEATF---SEPGTYTYYCEPHRG-AG 83 (91)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEETTCGG----G--C---EEEEECSTTCEEEEEC---CSCEEEEEECTTTGG-GT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCc----c--C---cccceeCCCCEEEEEe---CCCEEEEEEeCCCcc-CC
Confidence 6899999999765 58766778888776210 0 0 1123589999888876 679999999995432 39
Q ss_pred ceeeEEEe
Q 008351 136 VYGALIIR 143 (569)
Q Consensus 136 l~G~liV~ 143 (569)
|.|.|+|+
T Consensus 84 M~g~i~V~ 91 (91)
T 1bxv_A 84 MVGKIVVQ 91 (91)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 94
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.36 E-value=1.2e-06 Score=74.33 Aligned_cols=75 Identities=13% Similarity=0.158 Sum_probs=51.4
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecchhhhhcc
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRAT 135 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 135 (569)
..|++++||+|++.+.|. + |++......+-+|.. ...+.||++++|.| +.+|+|||+|..|.. .|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~-----H~v~~~~~~~P~g~~---~f~~~pg~t~s~TF---~~pG~y~y~C~~H~~-~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---S-----HNVEAIKEILPEGVE---SFKSKINESYTLTV---TEPGLYGVKCTPHFG-MG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---T-----CCCEECTTSSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEECGGGTT-TT
T ss_pred CEEEECCCCEEEEEECCC---C-----ceEEEcCCcCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCCCc-CC
Confidence 699999999987777762 2 333322111113431 23467999988888 578999999985432 38
Q ss_pred ceeeEEEeCC
Q 008351 136 VYGALIIRPK 145 (569)
Q Consensus 136 l~G~liV~~~ 145 (569)
|.|.|+|.+.
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999863
No 95
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.35 E-value=8.7e-07 Score=75.53 Aligned_cols=76 Identities=14% Similarity=0.228 Sum_probs=51.6
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecchhhhhcc
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRAT 135 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 135 (569)
+.|++++||+|++.+.|. + |++......+-||.. ...+.||++++|.| +.+|+|||||..|. ..|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~-----H~v~~~~~~~P~g~~---~f~s~pGet~s~TF---~~pG~y~y~C~~H~-~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---G-----HNSALMKGGAPEGAE---TWKGKINEEITVTL---SKPGVYMYQCAPHV-GMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---S-----CCCEECTTCSCTTCC---CCBCCTTCCCEEEC---CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEEEEECCC---C-----ceEEEccCcCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCCC-cCC
Confidence 799999999977666553 3 444322110113321 13467999988888 57999999998542 349
Q ss_pred ceeeEEEeCCC
Q 008351 136 VYGALIIRPKS 146 (569)
Q Consensus 136 l~G~liV~~~~ 146 (569)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999999754
No 96
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.34 E-value=1.1e-06 Score=72.23 Aligned_cols=74 Identities=16% Similarity=0.160 Sum_probs=52.6
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCC----------CCc--ccccCCCCCeeEEEEEeCCCCcce
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGP----------NMI--TQCPITPGRSYTYKFNVINQEGTL 123 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~----------~~~--tq~~i~pG~~~~y~~~~~~~~Gt~ 123 (569)
+.|++++||+|+ +.|....+++++.+.- ++. +.+ ....+.||+++++.| .++|+|
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y 83 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDIP--------AGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTY 83 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECCC--------TTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEE
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCc--------ccccccccchhhcccccccceecCCCCEEEEEe---CCCeEE
Confidence 789999999976 5588666666666521 111 111 123589999988877 579999
Q ss_pred eEecchhhhhccceeeEEEe
Q 008351 124 WWHGHVSLLRATVYGALIIR 143 (569)
Q Consensus 124 wYH~H~~~~~~Gl~G~liV~ 143 (569)
+|||+.| ..+||.|.|+|+
T Consensus 84 ~y~C~~H-~~~gM~G~i~V~ 102 (102)
T 1kdj_A 84 TFYCTPH-KSANMKGTLTVK 102 (102)
T ss_dssp EEECSTT-GGGTCEEEEEEC
T ss_pred EEEeCCC-cccCCeEEEEEC
Confidence 9999933 334999999984
No 97
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.33 E-value=1.5e-06 Score=70.63 Aligned_cols=77 Identities=16% Similarity=0.230 Sum_probs=53.8
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCC--cccccCCCCCeeEEEEEeCCCCcceeEecchhhhh
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNM--ITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLLR 133 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~--~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~ 133 (569)
+.|++++||+| ++.|....+++++.++...+ +|... .....+.||+++++.| ..+|+|+|||+.|. .
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~-~ 87 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPHR-G 87 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSSTT-T
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccChh-h
Confidence 68999999985 55687656677777764321 11100 0113488999998877 57999999999432 2
Q ss_pred ccceeeEEEe
Q 008351 134 ATVYGALIIR 143 (569)
Q Consensus 134 ~Gl~G~liV~ 143 (569)
.||.|.|+|+
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 3999999984
No 98
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.32 E-value=2.1e-06 Score=70.31 Aligned_cols=73 Identities=22% Similarity=0.390 Sum_probs=57.9
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|+.|+|++.|.+. ..|.|.+.+.. -...+.||....+.|.++
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~---~~H~~~~~~~~----------------------------~~~~~~pg~~~~~~~t~~ 76 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGK---SEHTFTIKKLG----------------------------IDVVVESGKEKNITVKPK 76 (100)
T ss_dssp SEEEECTTSCEEEEEEECSS---SCEEEEEGGGT----------------------------EEEEECTTCEEEEEECCC
T ss_pred CEEEECCCCEEEEEEEcCCC---ceEEEEEecCC----------------------------cceeecCCcceeEEEecc
Confidence 34789999999999999653 55666554321 224567888899999999
Q ss_pred CceeEEEeeccccccccccEEEEEEe
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
.||.|.|+|. .|...||.+.+.|+
T Consensus 77 ~~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 77 SAGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred cCceEEEECc--cccCCCCEEEEEEC
Confidence 9999999997 69999999999884
No 99
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.32 E-value=1.5e-06 Score=70.92 Aligned_cols=77 Identities=13% Similarity=0.217 Sum_probs=54.7
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCC------cccccCCCCCeeEEEEEeCCCCcceeEecch
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNM------ITQCPITPGRSYTYKFNVINQEGTLWWHGHV 129 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~------~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~ 129 (569)
+.|++++||+| ++.|....+++++.++...+ +|... .....+.||+++++.| .++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f---~~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEECGG
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEe---CCCcEEEEEcCC
Confidence 68999999985 55788777788887764321 22210 1113478999988877 479999999994
Q ss_pred hhhhccceeeEEEe
Q 008351 130 SLLRATVYGALIIR 143 (569)
Q Consensus 130 ~~~~~Gl~G~liV~ 143 (569)
| ...||.|.|+|.
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 H-AGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred c-cccCCEEEEEEC
Confidence 3 223999999984
No 100
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.31 E-value=1.6e-06 Score=70.81 Aligned_cols=77 Identities=12% Similarity=0.183 Sum_probs=53.8
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCC----C--cccccCCCCCeeEEEEEeCCCCcceeEecch
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPN----M--ITQCPITPGRSYTYKFNVINQEGTLWWHGHV 129 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~----~--~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~ 129 (569)
+.|++++||+|+ +.|....+++++.++...+ +|.. . .....+.||+++++.| .++|+|+|||+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf---~~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEE---CCCceEEEEcCC
Confidence 689999999865 5788766777777654221 2211 0 0113478999988877 479999999994
Q ss_pred hhhhccceeeEEEe
Q 008351 130 SLLRATVYGALIIR 143 (569)
Q Consensus 130 ~~~~~Gl~G~liV~ 143 (569)
| ..+||.|.|+|.
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1plc_A 87 H-QGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred C-cccCCEEEEEEC
Confidence 3 224999999984
No 101
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.27 E-value=1.8e-06 Score=70.87 Aligned_cols=86 Identities=15% Similarity=0.113 Sum_probs=58.2
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|++|+|+ |.+. ..|.++++.-... .+.+... .. ......+++.+.||+...+.| +
T Consensus 17 ~~i~v~~G~tV~~~--n~~~---~~H~~~~~~~~~~-----~~~~~~~---~~---~~~~~~~~~~~~pG~~~~~tf--~ 78 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVGE---TGHNIVFDIPAGA-----PGTVASE---LK---AASMDENDLLSEDEPSFKAKV--S 78 (102)
T ss_dssp SEEEECTTCCEEEE--ECSS---SCBCCEECCCTTC-----CHHHHHH---HH---HTSCCTTCCBBTTBCEEEECC--C
T ss_pred CEEEECCCCEEEEE--ECCC---CCeEEEEeCcccc-----cccccch---hh---cccccccceecCCCCEEEEEe--C
Confidence 45789999999986 5543 6899998731100 0000000 00 011224677888998877765 8
Q ss_pred CceeEEEeeccccccccccEEEEEEe
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
.||.|.|||+ .|.++||.+.+.|+
T Consensus 79 ~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 79 TPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp SCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCeEEEEEeC--CCcccCCeEEEEEC
Confidence 9999999999 99999999999883
No 102
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.26 E-value=3.6e-06 Score=71.23 Aligned_cols=75 Identities=9% Similarity=0.011 Sum_probs=51.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecchhhhhcc
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRAT 135 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 135 (569)
..|++++||+|++ +|.. .++++..+.... -+|.. ...+.||++++|.| +.+|+|||||-.|.. .|
T Consensus 22 ~~i~V~~GDTV~f--~n~~-~~Hnv~~~~~~~-----p~g~~---~~~~~pg~t~s~TF---~~~G~y~Y~C~~H~~-~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVKF--VPTD-KSHNAESVREVW-----PEGVA---PVKGGFSKEVVFNA---EKEGLYVLKCAPHYG-MG 86 (124)
T ss_dssp SEEEECTTCEEEE--ECSS-SSCCCEECTTTS-----CTTSC---CCBCCTTCCEEEEC---CSSEEEEEECTTTGG-GT
T ss_pred CEEEECCCCEEEE--EECC-CCccEEEeCCcC-----CCCcc---ccccCCCCEEEEEe---CCCeEEEEEcCCCCc-CC
Confidence 7999999999654 4553 455554442211 13321 23467999988888 578999999964432 39
Q ss_pred ceeeEEEeCC
Q 008351 136 VYGALIIRPK 145 (569)
Q Consensus 136 l~G~liV~~~ 145 (569)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999864
No 103
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.26 E-value=6.7e-06 Score=70.27 Aligned_cols=89 Identities=13% Similarity=0.085 Sum_probs=60.2
Q ss_pred CeEEEecC-CEEEEEEEeCCC-------CceeEeeeccccc------CC-CCCC----CCCCc--ccccCCCCCeeEEEE
Q 008351 56 PTIRVHEG-DTLVVHVFNESP-------YNITIHWHGIFQL------LS-PWAD----GPNMI--TQCPITPGRSYTYKF 114 (569)
Q Consensus 56 P~i~~~~G-d~v~i~l~N~l~-------~~~~iH~HG~~~~------~~-~~~D----G~~~~--tq~~i~pG~~~~y~~ 114 (569)
..|.|++| |+|+|+|+|... +...|--+|.... .. ..++ +.+.+ ...-|.||++.++.|
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVKF 97 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEEE
Confidence 58999999 999999999853 4445544442110 00 0001 11110 112478999999999
Q ss_pred EeC--CCCcceeEecchhhhhccceeeEEEeC
Q 008351 115 NVI--NQEGTLWWHGHVSLLRATVYGALIIRP 144 (569)
Q Consensus 115 ~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 144 (569)
+++ .++|+|||.|-..+...||.|.|+|.+
T Consensus 98 ~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 98 KVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred eccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 983 389999999987666669999999963
No 104
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.17 E-value=8.4e-06 Score=72.55 Aligned_cols=93 Identities=11% Similarity=0.073 Sum_probs=61.0
Q ss_pred CCCCCeEEE-ecCCEEEEEEEeCCC-------CceeEeeecccc------cCCCCCCCCC----C-c-ccccCCCCCeeE
Q 008351 52 RLPGPTIRV-HEGDTLVVHVFNESP-------YNITIHWHGIFQ------LLSPWADGPN----M-I-TQCPITPGRSYT 111 (569)
Q Consensus 52 ~~PgP~i~~-~~Gd~v~i~l~N~l~-------~~~~iH~HG~~~------~~~~~~DG~~----~-~-tq~~i~pG~~~~ 111 (569)
+|--..|.| +.||+|+|+|+|... +...|--+|... .....++-++ . + ..--|.||++++
T Consensus 54 ~F~P~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~s 133 (167)
T 3ay2_A 54 QFNTKDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESS 133 (167)
T ss_dssp CBSCSEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEE
T ss_pred eEecceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEE
Confidence 443358999 999999999999964 344444443210 0000001011 0 0 012489999999
Q ss_pred EEEEeC-CCCcceeEecchhhhhccceeeEEEeC
Q 008351 112 YKFNVI-NQEGTLWWHGHVSLLRATVYGALIIRP 144 (569)
Q Consensus 112 y~~~~~-~~~Gt~wYH~H~~~~~~Gl~G~liV~~ 144 (569)
+.|+++ -++|+|||+|-..+...||.|.|+|.+
T Consensus 134 vtf~~~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 134 LTLDPAKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp EEECGGGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred EEEecCCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 999973 189999999987766669999999963
No 105
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.12 E-value=1.1e-05 Score=66.58 Aligned_cols=77 Identities=16% Similarity=0.278 Sum_probs=51.7
Q ss_pred CCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecchhh
Q 008351 52 RLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHVSL 131 (569)
Q Consensus 52 ~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~ 131 (569)
.+--+.|++++||+|++ .|.....+++...... .|........+.||+++++.| ..+|+|+|+|-.|.
T Consensus 30 ~F~P~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~-------~~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~ 97 (106)
T 1id2_A 30 KYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP 97 (106)
T ss_dssp EESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT
T ss_pred EEeCCEEEECCCCEEEE--EECCCCcEEEEEeCCC-------CCcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC
Confidence 33337999999999755 5876555555444321 111111112478999988887 57899999997653
Q ss_pred hhccceeeEEEe
Q 008351 132 LRATVYGALIIR 143 (569)
Q Consensus 132 ~~~Gl~G~liV~ 143 (569)
||.|.|+|+
T Consensus 98 ---~M~G~I~V~ 106 (106)
T 1id2_A 98 ---FMRGKVIVE 106 (106)
T ss_dssp ---TCEEEEEEC
T ss_pred ---CCEEEEEEC
Confidence 999999984
No 106
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.07 E-value=1.3e-05 Score=65.24 Aligned_cols=83 Identities=18% Similarity=0.194 Sum_probs=57.7
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|++|+| .|.+. ..|.++++...+- . + .+. ... ...++.+.+.||+...+.| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~~---~~H~v~~~~~~~p---~--~-~~~----~~~----~~~~~~~~~~~G~~~~~tf--~ 75 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAG---FPHNIVFDEDSIP---S--G-VDA----SKI----SMSEEDLLNAKGETFEVAL--S 75 (99)
T ss_dssp SEEEECTTCEEEE--EECSS---CCBCCEECTTSSC---T--T-CCH----HHH----CCCTTCCBCSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECCC---CceEEEEeCCCCc---c--c-ccc----ccc----ccccCccccCCCCEEEEEE--C
Confidence 4578999999988 45542 6899998864320 0 0 000 000 0124557788998777755 7
Q ss_pred CceeEEEeeccccccccccEEEEEEe
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
.||.|.|||+ .|..+||.+.+.|+
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 76 NKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCceEEEEcC--CCcccCCEEEEEEC
Confidence 9999999999 79999999999873
No 107
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.07 E-value=1.3e-05 Score=67.95 Aligned_cols=75 Identities=12% Similarity=0.179 Sum_probs=48.7
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecchhhhhcc
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRAT 135 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 135 (569)
+.|++++||+|++ .|... + |.+.......-||... ....||++++|.| ..+|+|+|+|..|.. .|
T Consensus 21 ~~i~V~~GdtV~f--~~~~~-~-----H~v~~~~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~~-~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTF--IPVDK-G-----HNVESIKDMIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPHYA-MG 85 (123)
T ss_dssp SEEEECTTCEEEE--EESSS-S-----CCCEECTTCSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTTGG-GT
T ss_pred CEEEECCCCEEEE--EECCC-C-----eEEEEecccCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCccc-CC
Confidence 7999999999755 45432 3 4333221111133211 2356899888777 579999999975332 49
Q ss_pred ceeeEEEeCC
Q 008351 136 VYGALIIRPK 145 (569)
Q Consensus 136 l~G~liV~~~ 145 (569)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 108
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.06 E-value=1.4e-05 Score=64.97 Aligned_cols=77 Identities=13% Similarity=0.114 Sum_probs=52.8
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCC----cccccCCCCCeeEEEEEeCCCCcceeEecchhh
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNM----ITQCPITPGRSYTYKFNVINQEGTLWWHGHVSL 131 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~----~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~ 131 (569)
+.|++++||+|++ .|....++++....-..+ +|.-. .....+.||+++++.| .++|+|+|+|..|.
T Consensus 18 ~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~p-----~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~ 87 (98)
T 1iuz_A 18 SKISVAAGEAIEF--VNNAGFPHNIVFDEDAVP-----AGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPHA 87 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECTTSSC-----TTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTTG
T ss_pred CEEEECCCCEEEE--EECCCCCEEEEEeCCCCc-----cccccccccccccccCCCCEEEEEc---CCCEEEEEEchhhc
Confidence 7999999999655 587666666665542111 23210 0112488999988877 57999999998643
Q ss_pred hhccceeeEEEe
Q 008351 132 LRATVYGALIIR 143 (569)
Q Consensus 132 ~~~Gl~G~liV~ 143 (569)
. .||.|.|+|+
T Consensus 88 ~-~gM~G~I~V~ 98 (98)
T 1iuz_A 88 G-AGMKMTITVQ 98 (98)
T ss_dssp G-GTCEEEEEEC
T ss_pred c-CCCEEEEEEC
Confidence 2 3999999984
No 109
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.02 E-value=1.2e-05 Score=68.21 Aligned_cols=75 Identities=17% Similarity=0.325 Sum_probs=49.2
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecchhhhhcc
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRAT 135 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 135 (569)
+.|++++||+|+ +.|... . |.+......+-||... ..+.||++++|.| ..+|+|+|+|..|.. .|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~-----H~v~~~~~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~~-~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-G-----HNVETIKGMAPDGADY---VKTTVGQEAVVKF---DKEGVYGFKCAPHYM-MG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-S-----CCCEECTTSSCTTCCC---CBCCTTSCEEEEC---CSCEEEEEECSTTTT-TT
T ss_pred CEEEECCCCEEE--EEECCC-C-----cEEEEecccCCCCccc---eecCCCCEEEEEe---CCCeEEEEEeCCccc-cC
Confidence 799999999965 555532 3 3333221111133211 2367999988777 579999999975332 39
Q ss_pred ceeeEEEeCC
Q 008351 136 VYGALIIRPK 145 (569)
Q Consensus 136 l~G~liV~~~ 145 (569)
|.|.|+|.+.
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1pmy_A 86 MVALVVVGDK 95 (123)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 110
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.02 E-value=5.2e-05 Score=64.72 Aligned_cols=87 Identities=20% Similarity=0.153 Sum_probs=58.1
Q ss_pred CeEEE-ecCCEEEEEEEeCCC-------CceeEeeecccc-------cCCCCCC----CCCC-c-ccccCCCCCeeEEEE
Q 008351 56 PTIRV-HEGDTLVVHVFNESP-------YNITIHWHGIFQ-------LLSPWAD----GPNM-I-TQCPITPGRSYTYKF 114 (569)
Q Consensus 56 P~i~~-~~Gd~v~i~l~N~l~-------~~~~iH~HG~~~-------~~~~~~D----G~~~-~-tq~~i~pG~~~~y~~ 114 (569)
..|.| ++||+|+|+|+|... +...|--+|... .....+| +-+. + ..--|.||++.++.|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTF 97 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEEE
Confidence 58999 999999999999963 444454444111 0000001 0111 0 012479999999999
Q ss_pred EeCC--CCcc-eeEecchhhhhccceeeEEEe
Q 008351 115 NVIN--QEGT-LWWHGHVSLLRATVYGALIIR 143 (569)
Q Consensus 115 ~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~ 143 (569)
++ . .+|+ |||.|-..+..+||.|.|+|.
T Consensus 98 ~~-~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~ 128 (129)
T 2ccw_A 98 DV-SKIAAGENYAYFCSFPGHWAMMKGTLKLG 128 (129)
T ss_dssp EG-GGSCTTCCEEEECCSTTGGGTSEEEEEEC
T ss_pred ec-cccCCCceEEEEeCCCChhHcCEEEEEEe
Confidence 98 4 5655 999998777666999999986
No 111
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=98.00 E-value=1.7e-05 Score=82.96 Aligned_cols=89 Identities=18% Similarity=0.332 Sum_probs=61.7
Q ss_pred EEEEcCCCCCCeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeE
Q 008351 46 ITAVNGRLPGPTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWW 125 (569)
Q Consensus 46 ~~~~NG~~PgP~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wY 125 (569)
+...+-.+--+.|++++||+|++.++|.....-.+ ||..++. -|+ ..-+.||++.++.|++ .++|+|||
T Consensus 548 Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDVi--HSF~IPs----lGI----K~DaiPGrtnsvtFta-dkPGvY~y 616 (638)
T 3sbq_A 548 MTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVS--HGFVVVN----HGV----SMEISPQQTSSITFVA-DKPGLHWY 616 (638)
T ss_dssp EEEETTEESCCEEEEETTCEEEEEEEECCCSTTCC--EEEEETT----TTE----EEEECTTCEEEEEEEC-CSCEEEEE
T ss_pred EEEEcccccCCEEEEecCceeEEEEecCCcCCCce--eeeEecC----CCc----eeeeCCCCeEEEEEEc-CCCEEEEE
Confidence 34445555557999999999999999963211112 3332221 111 1248899999999998 99999999
Q ss_pred ecchhhhh--ccceeeEEEeCC
Q 008351 126 HGHVSLLR--ATVYGALIIRPK 145 (569)
Q Consensus 126 H~H~~~~~--~Gl~G~liV~~~ 145 (569)
+|...... .+|.|.|+|+|+
T Consensus 617 ~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 617 YCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp ECCSCCSTTCTTCEEEEEEECC
T ss_pred ECCCcCCCCcccceEEEEEecC
Confidence 99853222 389999999874
No 112
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.93 E-value=6.1e-05 Score=66.59 Aligned_cols=85 Identities=18% Similarity=0.253 Sum_probs=60.9
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccce-------EEeCCCc--
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNT-------IAVPVGG-- 515 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDT-------v~vp~~g-- 515 (569)
+.+.++.|+.|.+++.|.+. ...|-+-++.. +. .+.. .|...+. ..|.||+
T Consensus 61 p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~-------~~-~~~~----------~~~~~~~~~~~~~~~~i~PG~sg 120 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNK--GFGHSFDITKK-------GP-PYAV----------MPVIDPIVAGTGFSPVPKDGKFG 120 (154)
T ss_dssp CEEEECTTCEEEEEEEECCT--TCCCCCEEESC-------CS-CCCS----------SCCCCSEEEEBCCCCCCBTTBEE
T ss_pred CEEEEeCCCEEEEEEEcCCC--CeeeEEEEeec-------Cc-chhc----------cccccccccccccccccCCCCce
Confidence 46889999999999999631 25666665522 10 1100 0001121 2567888
Q ss_pred EEEEEEEeCCceeEEEeeccccccccccEEEEEEe
Q 008351 516 WAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 516 ~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
...+.|.+ .||.|.||||+--|...||-+.+.|.
T Consensus 121 t~t~tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 121 YTDFTWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEEEECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 89999999 99999999999999999999999873
No 113
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.91 E-value=3.8e-05 Score=63.27 Aligned_cols=73 Identities=21% Similarity=0.225 Sum_probs=50.4
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|+.|+|+ |.+. ..|.+|+|... .|. .. + +.-.+.+|+...+.| +
T Consensus 33 ~~i~v~~Gd~V~~~--N~d~---~~H~v~~~~~~-------~g~-------~~-------~-~~~~~~pG~~~~~tf--~ 83 (105)
T 2ov0_A 33 PELHVKVGDTVTWI--NREA---MPHNVHFVAGV-------LGE-------AA-------L-KGPMMKKEQAYSLTF--T 83 (105)
T ss_dssp SEEEECTTCEEEEE--ECSS---SCBCCEECTTT-------SSS-------SC-------E-ECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECCC---CCEEEEEcCCC-------CCc-------cc-------c-cccccCCCCEEEEEe--C
Confidence 45789999999985 6543 68999987521 010 00 1 122367887665554 8
Q ss_pred CceeEEEeeccccccccccEEEEEEe
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
.||.|.|||++ |. ||.+.+.|+
T Consensus 84 ~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 84 EAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999997 65 999998873
No 114
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=97.90 E-value=6.8e-05 Score=63.83 Aligned_cols=91 Identities=13% Similarity=0.155 Sum_probs=58.8
Q ss_pred CCCCCeEEE-ecCCEEEEEEEeCCCC-------ceeEeeecc---------cccCC----CCCCCCCCcccccCCCCCee
Q 008351 52 RLPGPTIRV-HEGDTLVVHVFNESPY-------NITIHWHGI---------FQLLS----PWADGPNMITQCPITPGRSY 110 (569)
Q Consensus 52 ~~PgP~i~~-~~Gd~v~i~l~N~l~~-------~~~iH~HG~---------~~~~~----~~~DG~~~~tq~~i~pG~~~ 110 (569)
+|--..|.| +.|++|+|+|+|.... ...|--.+. ..-.. ...|..-....--|.||+++
T Consensus 13 ~F~p~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~ 92 (128)
T 2iaa_C 13 QFNTKSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETD 92 (128)
T ss_dssp CBSCSEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEE
T ss_pred eEecCEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEE
Confidence 343358999 9999999999999643 333332221 00000 00011000001247999999
Q ss_pred EEEEEeCC--CCcc-eeEecchhhhhccceeeEEEe
Q 008351 111 TYKFNVIN--QEGT-LWWHGHVSLLRATVYGALIIR 143 (569)
Q Consensus 111 ~y~~~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~ 143 (569)
++.|++ . ++|+ |+|.|...+..+||.|.|+|.
T Consensus 93 ~vtf~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 127 (128)
T 2iaa_C 93 SVTFDV-SKLKEGEDYAFFCSFPGHWSIMKGTIELG 127 (128)
T ss_dssp EEEEES-SCCCTTCCEEEECCSTTCTTTSEEEEEEC
T ss_pred EEEEec-cccCCCceEEEEECCCChhHCCEEEEEEe
Confidence 999997 5 7885 999998777767999999986
No 115
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.87 E-value=5.1e-05 Score=81.09 Aligned_cols=77 Identities=21% Similarity=0.354 Sum_probs=61.8
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|+.|+|++.|.....+..|.|+++++.+. ..+.||....++|.++
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta~ 564 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVAA 564 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECC
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEECC
Confidence 467899999999999996432235788888764221 4678899999999999
Q ss_pred CceeEEEeec---cccccccccEEEEEEec
Q 008351 525 NPGVWFVHCH---LDVHLPWGLATAFVVEN 551 (569)
Q Consensus 525 npG~w~~HCH---il~H~d~GM~~~~~V~~ 551 (569)
.||.|.|||| ...|. ||.+.++|.+
T Consensus 565 ~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p 592 (595)
T 1fwx_A 565 NPGVYWYYCQWFCHALHM--EMRGRMLVEP 592 (595)
T ss_dssp SCEEEEEECCSCCSTTCT--TCEEEEEEEC
T ss_pred CCEEEEEECCCCCCCCcc--CCEEEEEEEc
Confidence 9999999999 45675 9999999975
No 116
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=97.84 E-value=7.5e-05 Score=63.56 Aligned_cols=87 Identities=16% Similarity=0.155 Sum_probs=57.7
Q ss_pred CeEEE-ecCCEEEEEEEeCCC-------CceeEeeecccc------cCC-CCCCCCC----C-c-ccccCCCCCeeEEEE
Q 008351 56 PTIRV-HEGDTLVVHVFNESP-------YNITIHWHGIFQ------LLS-PWADGPN----M-I-TQCPITPGRSYTYKF 114 (569)
Q Consensus 56 P~i~~-~~Gd~v~i~l~N~l~-------~~~~iH~HG~~~------~~~-~~~DG~~----~-~-tq~~i~pG~~~~y~~ 114 (569)
..|.| ++||+|+|+|+|... +...|--.+... ... ..+|=++ . + ..-.|.||+++++.|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVTF 97 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEEE
Confidence 58999 899999999999953 444443333211 000 0001011 0 0 012489999999999
Q ss_pred EeCC--CCcc-eeEecchhhhhccceeeEEEe
Q 008351 115 NVIN--QEGT-LWWHGHVSLLRATVYGALIIR 143 (569)
Q Consensus 115 ~~~~--~~Gt-~wYH~H~~~~~~Gl~G~liV~ 143 (569)
++ . .+|+ |||.|-..+..+||.|.|+|.
T Consensus 98 ~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 98 DV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred ec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 98 4 6776 999998777666999999984
No 117
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.81 E-value=4.3e-05 Score=64.67 Aligned_cols=73 Identities=14% Similarity=0.179 Sum_probs=48.8
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecchhhhhcc
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHVSLLRAT 135 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~~~~~G 135 (569)
+.|++++||+|++ .|... .++++... ..+-+|.. ...+.||++++|.| +++|+|||+|-.|. .
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~-----~~~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~---~ 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIK-----GMIPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHP---F 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECT-----TCSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEE---E
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEcc-----cccCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCc---c
Confidence 7999999998655 56543 33333332 11113321 12467899988888 57899999997643 3
Q ss_pred ceeeEEEeCC
Q 008351 136 VYGALIIRPK 145 (569)
Q Consensus 136 l~G~liV~~~ 145 (569)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999864
No 118
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.34 E-value=0.00043 Score=58.77 Aligned_cols=76 Identities=20% Similarity=0.255 Sum_probs=50.7
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|++|+|++.| ..|-+..+.. .+.. . ...+.+.||+.. .+.++
T Consensus 23 ~~i~V~~GDtVtf~n~~------~~H~v~~~~~----------~~P~--g-----------~~~f~s~pGet~--s~TF~ 71 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKD------KGHNSALMKG----------GAPE--G-----------AETWKGKINEEI--TVTLS 71 (127)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECTT----------CSCT--T-----------CCCCBCCTTCCC--EEECC
T ss_pred CEEEECCCCEEEEEECC------CCceEEEccC----------cCCC--C-----------ccceecCCCCEE--EEEeC
Confidence 45789999999998765 2455554321 0000 0 011222456654 45559
Q ss_pred CceeEEEeeccccccccccEEEEEEecCC
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVENGP 553 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~~~~ 553 (569)
.||.|.|||- .|...||.+.+.|+++.
T Consensus 72 ~pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 72 KPGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 9999999999 69999999999998754
No 119
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.33 E-value=0.00059 Score=57.53 Aligned_cols=75 Identities=15% Similarity=0.204 Sum_probs=51.4
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|++|+|++.+ ..|-+..+.. .+.. -.+.+.+.+|....+ .++
T Consensus 22 ~~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p~-------------g~~~~~~~pg~t~s~--TF~ 70 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTD------KSHNAESVRE----------VWPE-------------GVAPVKGGFSKEVVF--NAE 70 (124)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECTT----------TSCT-------------TSCCCBCCTTCCEEE--ECC
T ss_pred CEEEECCCCEEEEEECC------CCccEEEeCC----------cCCC-------------CccccccCCCCEEEE--EeC
Confidence 35789999999998653 4677665421 1110 011223446665444 459
Q ss_pred CceeEEEeeccccccccccEEEEEEecC
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVENG 552 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~~~ 552 (569)
.||.|.|||- .|..+||.+.+.|+++
T Consensus 71 ~~G~y~Y~C~--~H~~~GM~G~I~V~~p 96 (124)
T 3ef4_A 71 KEGLYVLKCA--PHYGMGMVVLVQVGKP 96 (124)
T ss_dssp SSEEEEEECT--TTGGGTCEEEEEESSC
T ss_pred CCeEEEEEcC--CCCcCCCEEEEEECCC
Confidence 9999999995 8999999999999874
No 120
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.33 E-value=0.00072 Score=57.04 Aligned_cols=75 Identities=12% Similarity=0.221 Sum_probs=51.0
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|++|+|++.| ..|-+..+.. .... . .+.+.+.|++...+.| +
T Consensus 21 ~~i~V~~GdtV~f~~~~------~~H~v~~~~~----------~~P~--g-----------~~~f~~~pg~t~s~TF--~ 69 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTD------KSHNVEAIKE----------ILPE--G-----------VESFKSKINESYTLTV--T 69 (123)
T ss_dssp SEEEECTTEEEEEEESS------TTCCCEECTT----------SSCT--T-----------CCCCBCCTTCCEEEEE--C
T ss_pred CEEEECCCCEEEEEECC------CCceEEEcCC----------cCCC--C-----------ccceecCCCCEEEEEe--C
Confidence 35689999999999876 2466554421 0000 0 0112234666555544 9
Q ss_pred CceeEEEeeccccccccccEEEEEEecC
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVENG 552 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~~~ 552 (569)
.||.|.|+|- .|..+||.+.+.|+++
T Consensus 70 ~pG~y~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 70 EPGLYGVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEESSS
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECCC
Confidence 9999999999 8999999999999863
No 121
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=97.14 E-value=0.0018 Score=53.15 Aligned_cols=73 Identities=22% Similarity=0.170 Sum_probs=49.0
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|++|+|+ |.+. ..|.+++.... .| .. ..++-.+.+|....+.| +
T Consensus 34 ~~i~V~~G~tV~~~--N~d~---~~H~v~~~~~~-------~~-------~~--------~~~s~~l~~g~~~~~tf--~ 84 (106)
T 1id2_A 34 PEVTIKAGETVYWV--NGEV---MPHNVAFKKGI-------VG-------ED--------AFRGEMMTKDQAYAITF--N 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECSS---SCBCCEECTTT-------SS-------SS--------CEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECCC---CcEEEEEeCCC-------CC-------cc--------cccccccCCCCEEEEEe--C
Confidence 35688999999987 5442 56776654321 00 00 01233467777766655 8
Q ss_pred CceeEEEeeccccccccccEEEEEEe
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
.||.|.|+|-+ |. ||.+.+.|+
T Consensus 85 ~~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 85 EAGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999987 76 999999873
No 122
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.13 E-value=0.0022 Score=51.74 Aligned_cols=81 Identities=22% Similarity=0.244 Sum_probs=53.4
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|++|+|+ |.+. ..|-+.+... .+.. ..+. .....+...+.+|....+.| +
T Consensus 18 ~~i~v~~GdtV~~~--n~~~---~~H~v~~~~~----------~~p~-----g~~~-~~~~~~~~~~~~g~~~~~tf--~ 74 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNAG---FPHNIVFDED----------AVPA-----GVDA-DAISYDDYLNSKGETVVRKL--S 74 (98)
T ss_dssp SEEEECTTCEEEEE--ECSS---CCEEEEECTT----------SSCT-----TCCH-HHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECCC---CCEEEEEeCC----------CCcc-----cccc-ccccccccccCCCCEEEEEc--C
Confidence 45789999999986 5432 5676655431 0100 0000 00113446788888777765 8
Q ss_pred CceeEEEeeccccccccccEEEEEEe
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
.||.|.|+|-+ |..+||.+.+.|.
T Consensus 75 ~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 75 TPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp SCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CCEEEEEEchh--hccCCCEEEEEEC
Confidence 99999999985 9999999999873
No 123
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.05 E-value=0.0036 Score=52.40 Aligned_cols=86 Identities=15% Similarity=0.176 Sum_probs=54.8
Q ss_pred CCCCeEEEec-CCEEEEEEEeCCC-------CceeEeee---------cccccCCCCCCCCC----Cc--ccccCCCCCe
Q 008351 53 LPGPTIRVHE-GDTLVVHVFNESP-------YNITIHWH---------GIFQLLSPWADGPN----MI--TQCPITPGRS 109 (569)
Q Consensus 53 ~PgP~i~~~~-Gd~v~i~l~N~l~-------~~~~iH~H---------G~~~~~~~~~DG~~----~~--tq~~i~pG~~ 109 (569)
|--..|.|+. |++|+|+|.|... ++..|--- |+..-+. +|=+| .+ ...-|.||++
T Consensus 15 F~p~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~--~~y~~~~d~~via~t~~l~pGes 92 (125)
T 3fsa_A 15 FNTNAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLD--KDYLKPDDSRVIAHTKLIGSGEK 92 (125)
T ss_dssp BSCSEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGG--GTTSCTTCTTCCEECCCBCTTCE
T ss_pred EecCEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChh--hccCCCCCccceeccceeCCCcE
Confidence 3346899986 9999999999963 44444321 1211101 11121 11 0123799999
Q ss_pred eEEEEEeC--CCCcceeEecchhhhhccceeeEEEe
Q 008351 110 YTYKFNVI--NQEGTLWWHGHVSLLRATVYGALIIR 143 (569)
Q Consensus 110 ~~y~~~~~--~~~Gt~wYH~H~~~~~~Gl~G~liV~ 143 (569)
++..|+.+ ..+|+|.|.|. +.. ||.|.++|.
T Consensus 93 ~~vtf~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 93 DSVTFDVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EEEEEEGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred EEEEEeCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 99999984 28999999998 444 999999884
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.98 E-value=0.0027 Score=54.35 Aligned_cols=73 Identities=22% Similarity=0.170 Sum_probs=49.7
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|++|+|+ |.+. ..|-+++.... .| .. .-++-.+.+|+...+.| +
T Consensus 60 ~~i~V~~GdtV~~~--N~d~---~~H~v~~~~~~-------~g-------~~--------~~~s~~l~pG~t~~~tF--~ 110 (132)
T 3c75_A 60 PEVTIKAGETVYWV--NGEV---MPHNVAFKKGI-------VG-------ED--------AFRGEMMTKDQAYAITF--N 110 (132)
T ss_dssp SEEEECTTCEEEEE--ECSS---SCBCCEECTTT-------SS-------SS--------CEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECCC---CceEEEEeCCC-------CC-------cc--------cccccccCCCCEEEEEc--C
Confidence 45789999999987 5442 57877764311 00 00 11233467887766665 8
Q ss_pred CceeEEEeeccccccccccEEEEEEe
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
.||.|.|||-+ |. ||-+.+.|+
T Consensus 111 ~~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 111 EAGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--Cc--CCEEEEEEC
Confidence 99999999986 76 999999873
No 125
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.69 E-value=0.0061 Score=51.35 Aligned_cols=75 Identities=13% Similarity=0.261 Sum_probs=48.5
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|++|+|++.+ ..|-+.++- +.. +. +.. .+.+.+|.. +.+.++
T Consensus 21 ~~i~V~~GdtV~f~~~~------~~H~v~~~~----------~~~-p~-~~~-----------~~~~~pG~t--~~~tF~ 69 (123)
T 1paz_A 21 AYIKANPGDTVTFIPVD------KGHNVESIK----------DMI-PE-GAE-----------KFKSKINEN--YVLTVT 69 (123)
T ss_dssp SEEEECTTCEEEEEESS------SSCCCEECT----------TCS-CT-TCC-----------CCBCCTTCC--EEEECC
T ss_pred CEEEECCCCEEEEEECC------CCeEEEEec----------ccC-CC-Ccc-----------ceecCCCCE--EEEEeC
Confidence 35688999999987653 245555431 000 00 000 112346664 445568
Q ss_pred CceeEEEeeccccccccccEEEEEEecC
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVENG 552 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~~~ 552 (569)
.||.|.|+|- .|..+||.+.+.|.++
T Consensus 70 ~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 70 QPGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CCEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 9999999997 5999999999999863
No 126
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.56 E-value=0.0066 Score=51.12 Aligned_cols=38 Identities=29% Similarity=0.436 Sum_probs=30.6
Q ss_pred eCCCcEEEEEEEeCCceeEEEeeccccccccccEEEEEEecC
Q 008351 511 VPVGGWAVIRFQANNPGVWFVHCHLDVHLPWGLATAFVVENG 552 (569)
Q Consensus 511 vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 552 (569)
+.+|.... +.++.||.|.|+|- .|..+||.+.+.|.++
T Consensus 58 ~~pG~t~~--~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAV--VKFDKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEE--EECCSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred cCCCCEEE--EEeCCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 34666544 55589999999997 5999999999999864
No 127
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.37 E-value=0.017 Score=60.59 Aligned_cols=79 Identities=19% Similarity=0.277 Sum_probs=60.9
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|+.|+|++.|.....+..|.|.+.+... -+.+.||....+.|.++
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGI----------------------------K~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGV----------------------------SMEISPQQTSSITFVAD 609 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTE----------------------------EEEECTTCEEEEEEECC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCc----------------------------eeeeCCCCeEEEEEEcC
Confidence 35789999999999999642224677776654321 12577888899999999
Q ss_pred CceeEEEeecccccc-ccccEEEEEEec
Q 008351 525 NPGVWFVHCHLDVHL-PWGLATAFVVEN 551 (569)
Q Consensus 525 npG~w~~HCHil~H~-d~GM~~~~~V~~ 551 (569)
.||.|.+||...-|. +.+|.+.+.|++
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEec
Confidence 999999999987765 468999999864
No 128
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.34 E-value=0.017 Score=49.43 Aligned_cols=74 Identities=16% Similarity=0.323 Sum_probs=53.3
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecchh-hh-h
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHVS-LL-R 133 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~-~~-~ 133 (569)
..|.++.|++|++.++|.. . .|+...+.. |. +.-+.||+.-++.|+. +++|+|+|+|..- +. -
T Consensus 60 ~~l~Vp~G~~V~~~vts~D-V-----~Hsf~ip~~----~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSPD-V-----IHGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBSS-S-----CEEEEETTS----SC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeCC-c-----cceEEecCC----Cc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 4899999999999999973 2 344443321 21 1247899989999998 9999999999541 11 1
Q ss_pred ccceeeEEEeC
Q 008351 134 ATVYGALIIRP 144 (569)
Q Consensus 134 ~Gl~G~liV~~ 144 (569)
.+|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 38999988863
No 129
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=96.10 E-value=0.017 Score=51.25 Aligned_cols=95 Identities=12% Similarity=0.109 Sum_probs=60.6
Q ss_pred EEEc-cCCCEEEEEEEeCCCCC--CCCCCeeeecCcEEEEEeCcCcCCcc--cc--cccccCC---C-CCccceEEeCCC
Q 008351 446 VKTL-KFNSTVEIVLQNTALIA--VENHPIHIHGFDFHVLAQGFGNYNAA--RD--IKKFNLV---N-PQRRNTIAVPVG 514 (569)
Q Consensus 446 ~~~~-~~g~~ve~~l~N~~~~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~--~~--~~~~~~~---~-p~~rDTv~vp~~ 514 (569)
.+.+ +.|+.|.|+|.|.+... .+.|- |-+...+ .++.. .. ....++. + .....+..|.||
T Consensus 59 ~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn-------~vi~~~~--~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pG 129 (167)
T 3ay2_A 59 DIQVSKACKEFTITLKHTGTQPKASMGHN-------LVIAKAE--DMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGG 129 (167)
T ss_dssp EEEEETTCSSEEEEEEECSCSCHHHHCBC-------CEEEEGG--GHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTT
T ss_pred eEEEecCCCEEEEEEEECCCCccccccce-------EEeccCc--chhhhHHHhhhccccccccccccchhccceeeCCC
Confidence 4678 89999999999976410 11344 3332221 11000 00 0000000 1 112345678999
Q ss_pred cEEEEEEEeC--CceeEEEeeccccccccccEEEEEEe
Q 008351 515 GWAVIRFQAN--NPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 515 g~~~irf~ad--npG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
+...|.|.++ .||.|-|+|-+--|.. ||-+.+.|.
T Consensus 130 et~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~ 166 (167)
T 3ay2_A 130 EESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLV 166 (167)
T ss_dssp CEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEE
T ss_pred CEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEe
Confidence 9999999988 8999999999999988 899999986
No 130
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=95.81 E-value=0.044 Score=48.52 Aligned_cols=73 Identities=16% Similarity=0.326 Sum_probs=53.9
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecch-hhhh-
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHV-SLLR- 133 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~-~~~~- 133 (569)
..|.++.|++|++.++|. +. .|+...+.. |. +.-+.||+..++.|++ +++|+|++.|.. -|..
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DV-----iHsf~IP~l----gi----k~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DV-----IHGFHVEGT----NI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SS-----CEEEEETTS----SC----EEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-Cc-----eEEEEECCC----Ce----EEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 589999999999999996 32 244433321 11 1236789999999998 999999999974 3333
Q ss_pred ccceeeEEEe
Q 008351 134 ATVYGALIIR 143 (569)
Q Consensus 134 ~Gl~G~liV~ 143 (569)
++|.|-++|+
T Consensus 158 s~M~g~V~V~ 167 (168)
T 3s8f_B 158 QNMFGTIVVK 167 (168)
T ss_dssp GGCEEEEEEE
T ss_pred CCCEEEEEEe
Confidence 3899999986
No 131
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.54 E-value=0.079 Score=44.82 Aligned_cols=96 Identities=8% Similarity=0.077 Sum_probs=61.6
Q ss_pred eEEEccCC-CEEEEEEEeCCCCC--CCCCCeeeecCcEEEEEeCcCcCCcc-----cccccccC---CC-CCccceEEeC
Q 008351 445 SVKTLKFN-STVEIVLQNTALIA--VENHPIHIHGFDFHVLAQGFGNYNAA-----RDIKKFNL---VN-PQRRNTIAVP 512 (569)
Q Consensus 445 ~~~~~~~g-~~ve~~l~N~~~~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~-----~~~~~~~~---~~-p~~rDTv~vp 512 (569)
..+.++.| +.+.+++.|.+.+. .+.|-|- +...+. +... ......++ .+ -....+..|.
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~v-------i~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~ 88 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWV-------LAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIG 88 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCE-------EEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBC
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceE-------EecCcc--hhhhHHHhhhccccccccccccccceeeeeEEC
Confidence 34788999 99999999976421 1235433 332221 0000 00000010 00 1123456788
Q ss_pred CCcEEEEEEEeC---CceeEEEeeccccccccccEEEEEEe
Q 008351 513 VGGWAVIRFQAN---NPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 513 ~~g~~~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
||+...|.|.++ .||.|-|.|-+--|.. ||-+.+.|.
T Consensus 89 pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~ 128 (129)
T 1cuo_A 89 GGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLE 128 (129)
T ss_dssp TTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEE
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEe
Confidence 999999999997 9999999999988988 899999886
No 132
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.46 E-value=0.05 Score=45.57 Aligned_cols=73 Identities=15% Similarity=0.212 Sum_probs=46.6
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
..+.++.|++|+|+..+ ..|-++++. +.+.. .. ..+.+.+|....+. ++
T Consensus 21 ~~i~V~~GdtV~f~n~d------~~H~v~~~~----------~~~p~--~~-----------~~~~~~~g~t~~~t--F~ 69 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTD------KGHNVETIK----------GMIPD--GA-----------EAFKSKINENYKVT--FT 69 (122)
T ss_dssp SEEEECTTEEEEEEESS------SSCCCEECT----------TCSCT--TC-----------CCCBCCTTCCEEEE--EC
T ss_pred CEEEECCCCEEEEEECC------CCcEEEEcc----------cccCC--Cc-----------ceeecCCCCEEEEE--eC
Confidence 35688999999987432 246666553 11110 00 01123466654444 48
Q ss_pred CceeEEEeeccccccccccEEEEEEecC
Q 008351 525 NPGVWFVHCHLDVHLPWGLATAFVVENG 552 (569)
Q Consensus 525 npG~w~~HCHil~H~d~GM~~~~~V~~~ 552 (569)
.||.|.|+|-+ |.. |.+.+.|.+.
T Consensus 70 ~~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 70 APGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp SCEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CCEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 99999999987 776 9999999864
No 133
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.29 E-value=0.088 Score=44.93 Aligned_cols=70 Identities=19% Similarity=0.300 Sum_probs=50.9
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeCCc
Q 008351 447 KTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQANNP 526 (569)
Q Consensus 447 ~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnp 526 (569)
+.++.|+.|+|++.|.+ ..|. |++-+. .--+.+.||....+.|.++.|
T Consensus 62 l~Vp~G~~V~~~vts~D----V~Hs-------f~ip~~---------------------~~k~d~~PG~~~~~~~~~~~~ 109 (135)
T 2cua_A 62 IEVPQGAEIVFKITSPD----VIHG-------FHVEGT---------------------NINVEVLPGEVSTVRYTFKRP 109 (135)
T ss_dssp EEEETTSEEEEEEEBSS----SCEE-------EEETTS---------------------SCEEEECBTBCEEEEEECCSC
T ss_pred EEEcCCCEEEEEEEeCC----ccce-------EEecCC---------------------CceeEeCCCCcEEEEEEcCCC
Confidence 57899999999998742 3443 433111 011445677778899999999
Q ss_pred eeEEEeecc---ccccccccEEEEEEe
Q 008351 527 GVWFVHCHL---DVHLPWGLATAFVVE 550 (569)
Q Consensus 527 G~w~~HCHi---l~H~d~GM~~~~~V~ 550 (569)
|.|.++|.. ..| .+|-+.++|.
T Consensus 110 G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 110 GEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp EEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred EEEEEECcccCCCCc--CCCEEEEEEE
Confidence 999999987 566 5898888875
No 134
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=94.70 E-value=0.16 Score=42.87 Aligned_cols=43 Identities=14% Similarity=0.256 Sum_probs=37.6
Q ss_pred ceEEeCCCcEEEEEEEeC--Ccee-EEEeeccccccccccEEEEEEe
Q 008351 507 NTIAVPVGGWAVIRFQAN--NPGV-WFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 507 DTv~vp~~g~~~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 550 (569)
.+..|.||+...|-|.++ .+|. |-|.|-+--|.. ||-+.+.|.
T Consensus 83 ~t~~l~pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 83 HTKVIGGGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp ECCCBCTTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred eeeEECCCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 455689999999999998 7876 999999999988 899999885
No 135
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=94.50 E-value=0.16 Score=42.75 Aligned_cols=96 Identities=13% Similarity=0.186 Sum_probs=59.6
Q ss_pred eEEEc-cCCCEEEEEEEeCCCCC--CCCCCeeeecCcEEEEEeCcCcCCcc-----cccccccCC---CC-CccceEEeC
Q 008351 445 SVKTL-KFNSTVEIVLQNTALIA--VENHPIHIHGFDFHVLAQGFGNYNAA-----RDIKKFNLV---NP-QRRNTIAVP 512 (569)
Q Consensus 445 ~~~~~-~~g~~ve~~l~N~~~~~--~~~HP~HlHG~~F~Vl~~g~g~~~~~-----~~~~~~~~~---~p-~~rDTv~vp 512 (569)
..+.+ +.|+.|.+++.|.+... .+.|-|-+ ...+ .++.. ......++. ++ ....|-.|.
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~ 88 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEA--DMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIG 88 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGG--GHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBC
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEE-------cccc--chhhHHHHHhhccccccccccccchhheeeeeeC
Confidence 34678 89999999999976411 11355332 2221 00000 000000111 11 122344689
Q ss_pred CCcEEEEEEEeC--Ccee-EEEeeccccccccccEEEEEEe
Q 008351 513 VGGWAVIRFQAN--NPGV-WFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 513 ~~g~~~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 550 (569)
||+...|.|.+. .+|. |-|.|-+--|.. ||-+.+.|.
T Consensus 89 pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 89 AGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp TTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 999999999998 7876 999999999998 899998873
No 136
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.01 E-value=0.2 Score=42.21 Aligned_cols=43 Identities=14% Similarity=0.252 Sum_probs=38.1
Q ss_pred ceEEeCCCcEEEEEEEeC--Ccee-EEEeeccccccccccEEEEEEe
Q 008351 507 NTIAVPVGGWAVIRFQAN--NPGV-WFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 507 DTv~vp~~g~~~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 550 (569)
.+..|.||+...|.|.+. .+|. |-|.|-+--|.. ||-+.+.|.
T Consensus 82 ~t~~l~pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 82 HTSVIGGGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp ECCCBCTTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred cceeeCCCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 455689999999999998 8995 999999999998 999999885
No 137
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=92.35 E-value=0.74 Score=40.59 Aligned_cols=72 Identities=15% Similarity=0.248 Sum_probs=53.8
Q ss_pred EEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeCCc
Q 008351 447 KTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQANNP 526 (569)
Q Consensus 447 ~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnp 526 (569)
+.++.|+.|+|.+.|.. ..|.|-+=... =-+.+-||....+.|.++.|
T Consensus 95 l~VP~G~~Vr~~vTS~D----ViHsf~IP~lg----------------------------ik~da~PG~~n~~~~~~~kp 142 (168)
T 3s8f_B 95 IEVPQGAEIVFKITSPD----VIHGFHVEGTN----------------------------INVEVLPGEVSTVRYTFKRP 142 (168)
T ss_dssp EEEETTSEEEEEEECSS----SCEEEEETTSS----------------------------CEEEECTTBCEEEEEECCSC
T ss_pred EEEeCCCeEEEEEecCC----ceEEEEECCCC----------------------------eEEEecCCceeEEEEEeCCC
Confidence 57899999999999853 56665543211 11335577778899999999
Q ss_pred eeEEEeeccc-cccccccEEEEEEe
Q 008351 527 GVWFVHCHLD-VHLPWGLATAFVVE 550 (569)
Q Consensus 527 G~w~~HCHil-~H~d~GM~~~~~V~ 550 (569)
|.|.+.|... -+-+.+|...+.|.
T Consensus 143 G~y~g~Cse~CG~~Hs~M~g~V~V~ 167 (168)
T 3s8f_B 143 GEYRIICNQYCGLGHQNMFGTIVVK 167 (168)
T ss_dssp EEEEEECCSCCSTTGGGCEEEEEEE
T ss_pred EEEEEECCcCCCCCcCCCEEEEEEe
Confidence 9999999864 45678999999886
No 138
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=91.16 E-value=1.5 Score=36.23 Aligned_cols=74 Identities=16% Similarity=0.181 Sum_probs=52.9
Q ss_pred cCcEE--EEEEEecCCCCeEEEEEe-CceeEEEEec--CCCCC--------ceEeeEEEEcCCcEEEEEEEeCC--CCce
Q 008351 217 EGKTY--LLRIINAALNNQLFFKIA-NHKFTVVSVD--ASYTD--------PYVTDVVVIAPGQTTDVLLKADQ--PVGS 281 (569)
Q Consensus 217 ~G~~~--rlRliN~~~~~~~~~~i~-gh~~~via~D--G~~~~--------p~~~d~v~l~pgeR~dv~v~~~~--~~G~ 281 (569)
.|+.+ .|.+.|.+... ..+.+. |+.+.++-.| |..+- ........|.|||...+....++ .||.
T Consensus 16 ~g~~v~~~ltv~N~s~~~-v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~ 94 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERA-IEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGT 94 (120)
T ss_dssp CSSCEEEEEEEEECSSSC-EEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEE
T ss_pred CCCeEEEEEEEEcCCCCc-EEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCcc
Confidence 44444 57888999655 677775 6665655554 65441 34568999999999999999984 5899
Q ss_pred eEEEeeeccc
Q 008351 282 YYMAARAYAS 291 (569)
Q Consensus 282 y~l~~~~~~~ 291 (569)
|.+++.....
T Consensus 95 Ytl~a~l~~~ 104 (120)
T 3isy_A 95 YEVKVTFKGR 104 (120)
T ss_dssp EEEEEEECCE
T ss_pred EEEEEEEEee
Confidence 9998766443
No 139
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=90.74 E-value=0.79 Score=38.14 Aligned_cols=93 Identities=12% Similarity=0.183 Sum_probs=58.4
Q ss_pred eEEEccC-CCEEEEEEEeCCCCC--CCCCCeeeecCcEEEEEeCcCcCCc---c--cccccccC----CCCCccceEEeC
Q 008351 445 SVKTLKF-NSTVEIVLQNTALIA--VENHPIHIHGFDFHVLAQGFGNYNA---A--RDIKKFNL----VNPQRRNTIAVP 512 (569)
Q Consensus 445 ~~~~~~~-g~~ve~~l~N~~~~~--~~~HP~HlHG~~F~Vl~~g~g~~~~---~--~~~~~~~~----~~p~~rDTv~vp 512 (569)
.-+.++. |+.|+++|.|.+.++ .+.|- | ||+... .... + .....-++ .....-.|..|.
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn-------~-Vl~~~~-~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~ 88 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLPKNVMGHN-------W-VLSTAA-DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIG 88 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCCHHHHCBC-------C-EEEEHH-HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBC
T ss_pred CEEEEecCCCEEEEEEEECCcccccccCce-------E-EEcccc-hHHHHHHHHHhcChhhccCCCCCccceeccceeC
Confidence 3467765 999999999987521 12455 3 555421 1110 0 00000111 112344566799
Q ss_pred CCcEEEEEEEeC---CceeEEEeeccccccccccEEEEEEe
Q 008351 513 VGGWAVIRFQAN---NPGVWFVHCHLDVHLPWGLATAFVVE 550 (569)
Q Consensus 513 ~~g~~~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~ 550 (569)
||+...|-|.+. .+|.|-|-|- -|. ||-+.+.|+
T Consensus 89 pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 89 SGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp TTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred CCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 999999999987 8999999999 888 999999873
No 140
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=82.52 E-value=12 Score=30.72 Aligned_cols=62 Identities=10% Similarity=0.159 Sum_probs=42.4
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCC---cccccCCCCCeeEEEEEeCC--CCcceeEecc
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNM---ITQCPITPGRSYTYKFNVIN--QEGTLWWHGH 128 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~---~tq~~i~pG~~~~y~~~~~~--~~Gt~wYH~H 128 (569)
=+|+...|++..+.|.+...+.+- .|+||-.+ +...-|.||++.+|+...++ .+|+|..+.-
T Consensus 34 v~l~f~Sgq~~Df~v~d~~G~~Vw-----------rwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a~ 100 (120)
T 3isy_A 34 IEFQFSTGQKFELVVYDSEHKERY-----------RYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKVT 100 (120)
T ss_dssp EEEEESSSCCEEEEEECTTCCEEE-----------ETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEEE
T ss_pred EEEEeCCCCEEEEEEECCCCCEEE-----------EccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEEE
Confidence 477777777777777775332211 35677543 23356999999999999962 5799877653
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=79.85 E-value=5.9 Score=35.89 Aligned_cols=63 Identities=13% Similarity=0.136 Sum_probs=47.8
Q ss_pred eEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecc
Q 008351 211 YKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYA 290 (569)
Q Consensus 211 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~ 290 (569)
..+.++.|+.+||+|.+.. -.|.|.|.....++- .-||..-.+.+.++ .+|.|..+|.-+.
T Consensus 41 n~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgvK~d----------------aiPGr~n~l~~~~~-~pG~y~g~CsE~C 101 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS--VMHSFFIPRLGSQIY----------------AMAGMQTRLHLIAN-EPGTYDGICAEIC 101 (205)
T ss_dssp SEEEEETTSCEEEEEEESS--SCEEEEEGGGTEEEE----------------ECTTCCEEEEECCS-SSEEEEEEECSCC
T ss_pred ceEEEeCCCEEEEEEecCC--ceeeEEecccCcEEE----------------ecCCceEEEEEEeC-CCeEEEEEccccc
Confidence 3689999999999998764 456777776555442 34788888888888 7999999998654
Q ss_pred cC
Q 008351 291 SA 292 (569)
Q Consensus 291 ~~ 292 (569)
..
T Consensus 102 G~ 103 (205)
T 1cyx_A 102 GP 103 (205)
T ss_dssp ST
T ss_pred cc
Confidence 43
No 142
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=71.11 E-value=0.51 Score=39.21 Aligned_cols=17 Identities=18% Similarity=0.333 Sum_probs=15.7
Q ss_pred eEEEecCCEEEEEEEeC
Q 008351 57 TIRVHEGDTLVVHVFNE 73 (569)
Q Consensus 57 ~i~~~~Gd~v~i~l~N~ 73 (569)
-|.|+.|++|++.+.|.
T Consensus 72 ~InV~~GETVrF~v~nk 88 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEK 88 (131)
T ss_dssp EEEEETTCEEEEEETTE
T ss_pred EEEecCCCEEEEEeCCc
Confidence 49999999999999987
No 143
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=69.17 E-value=8.6 Score=37.99 Aligned_cols=16 Identities=25% Similarity=0.250 Sum_probs=13.7
Q ss_pred ccCCCCCeeEEEEEeC
Q 008351 102 CPITPGRSYTYKFNVI 117 (569)
Q Consensus 102 ~~i~pG~~~~y~~~~~ 117 (569)
..|+||++.+.+|.+.
T Consensus 95 ~~L~pG~Sve~~~dla 110 (343)
T 2x3c_A 95 QLLKAGQSLTVQAEVS 110 (343)
T ss_dssp EEECTTCEEEEEEECT
T ss_pred EEeCCCCeEEEEEehh
Confidence 3599999999999983
No 144
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=64.90 E-value=14 Score=34.84 Aligned_cols=62 Identities=13% Similarity=0.241 Sum_probs=47.1
Q ss_pred eEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecc
Q 008351 211 YKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYA 290 (569)
Q Consensus 211 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~ 290 (569)
..+.++.|+.+||++-+. .-.|.|.+.+...++- .-||..-.+.+.++ .||.|...|.-+.
T Consensus 171 n~l~lP~g~~v~~~~tS~--DViHsf~ip~l~~k~d----------------a~PG~~n~~~~~~~-~~G~y~g~Cse~C 231 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA--DVIHSWTVPAFGVKQD----------------AVPGRLAQLWFRAE-REGIFFGQCSELC 231 (262)
T ss_dssp SCEEEETTSEEEEEEEES--SSCEEEEEGGGTEEEE----------------ECBTCCEEEEEECC-SCEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEEC--cccceeeecccCceEE----------------ecCCceeEEEEecC-CcEEEEEEChHhc
Confidence 368999999999999866 4456777776555442 24788888888888 7999999998654
Q ss_pred c
Q 008351 291 S 291 (569)
Q Consensus 291 ~ 291 (569)
.
T Consensus 232 G 232 (262)
T 2gsm_B 232 G 232 (262)
T ss_dssp S
T ss_pred c
Confidence 3
No 145
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=64.42 E-value=18 Score=34.89 Aligned_cols=63 Identities=16% Similarity=0.256 Sum_probs=48.0
Q ss_pred eEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecc
Q 008351 211 YKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYA 290 (569)
Q Consensus 211 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~ 290 (569)
..+.++.|+.+||++-+.. -.|.|.+.....++- .-||..-.+.+.++ .||.|..+|.-+.
T Consensus 189 N~lvlP~g~~V~~~ltS~D--ViHsf~iP~lg~k~d----------------aiPG~~n~~~~~~~-~~G~y~g~CsE~C 249 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD--VIHAWTIPAFAVKQD----------------AVPGRIAQLWFSVD-QEGVYFGQCSELC 249 (298)
T ss_dssp SCEEEESSSEEEEEEEESS--SCEEEEEGGGTEEEE----------------ECTTCCEEEEEECS-SSEEEEECCCSCC
T ss_pred ceEEEEcCCEEEEEEEeCC--ccceeeEcccCceEE----------------ecCCceEEEEEEeC-CCEEEEEEccccc
Confidence 4689999999999998854 456777776555442 24888888888888 7999999998654
Q ss_pred cC
Q 008351 291 SA 292 (569)
Q Consensus 291 ~~ 292 (569)
..
T Consensus 250 G~ 251 (298)
T 3hb3_B 250 GI 251 (298)
T ss_dssp ST
T ss_pred Cc
Confidence 33
No 146
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=61.62 E-value=16 Score=33.10 Aligned_cols=73 Identities=16% Similarity=0.041 Sum_probs=50.5
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecchh-hhh-
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHVS-LLR- 133 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~~-~~~- 133 (569)
..|.+..|+.|++.|++.. . | ||..++.. | .+.-+-||..-...|.+ +++|+|+..|..- |..
T Consensus 41 n~l~lP~g~~V~~~lTS~D-V---i--HSF~IP~l----g----vK~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~H 105 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS-V---M--HSFFIPRL----G----SQIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGH 105 (205)
T ss_dssp SEEEEETTSCEEEEEEESS-S---C--EEEEEGGG----T----EEEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTS
T ss_pred ceEEEeCCCEEEEEEecCC-c---e--eeEEeccc----C----cEEEecCCceEEEEEEe-CCCeEEEEEcccccccch
Confidence 4799999999999999862 1 1 33333321 1 11235679888899988 9999999999642 222
Q ss_pred ccceeeEEEe
Q 008351 134 ATVYGALIIR 143 (569)
Q Consensus 134 ~Gl~G~liV~ 143 (569)
..|.+.++|.
T Consensus 106 s~M~~~v~vv 115 (205)
T 1cyx_A 106 SGMKFKAIAT 115 (205)
T ss_dssp TTCCEEEEEE
T ss_pred hhceEEEEEE
Confidence 2677877777
No 147
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=54.16 E-value=40 Score=27.25 Aligned_cols=47 Identities=15% Similarity=0.346 Sum_probs=31.7
Q ss_pred cEEEEEEEecCCCC-eEEEEEeCc-eeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEe
Q 008351 219 KTYLLRIINAALNN-QLFFKIANH-KFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKA 275 (569)
Q Consensus 219 ~~~rlRliN~~~~~-~~~~~i~gh-~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~ 275 (569)
-.|+|+|+|.+... .+.+++.|. .++++. + ..+.+.|||..++-|..
T Consensus 33 N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-------~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 33 NTYTLKVINKTQQVQEYNLDVKGLNDVSWYG-------K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEEECSSSCEEEEEEEESCSSCEEES-------C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEEeCCcccEEeC-------C---CcEEECCCCEEEEEEEE
Confidence 36999999999665 466777663 244332 1 14899999977775554
No 148
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=50.46 E-value=32 Score=31.69 Aligned_cols=62 Identities=11% Similarity=0.164 Sum_probs=45.8
Q ss_pred eEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecc
Q 008351 211 YKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYA 290 (569)
Q Consensus 211 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~ 290 (569)
..+.++.|+.+|+++-.+ .-.|.|.+....+++=+ -||..-.+.+.++ .||.|..+|.-+.
T Consensus 140 n~lvlP~~~~Vr~~vtS~--DViHsf~vP~lg~K~Da----------------iPGr~n~~~~~~~-~~G~y~g~Cse~C 200 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE--DVLHSWAVPSLGLKTDA----------------IPGRLNQTTLMSS-RPGLYYGQCSEIC 200 (227)
T ss_dssp SCEEEETTSCEEEEEEES--SSCEEEEEGGGTEEEEE----------------CTTCCEEEEECCS-SCEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEeC--cccceeeecccCcEEEe----------------cCCceEEEEEecC-CcEEEEEEehhhc
Confidence 468999999999988775 44567777755444422 3787777778887 7999999997654
Q ss_pred c
Q 008351 291 S 291 (569)
Q Consensus 291 ~ 291 (569)
.
T Consensus 201 G 201 (227)
T 1v54_B 201 G 201 (227)
T ss_dssp S
T ss_pred c
Confidence 3
No 149
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=46.33 E-value=56 Score=30.72 Aligned_cols=75 Identities=20% Similarity=0.209 Sum_probs=50.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeeecccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCCcceeEecch-hhhh-
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWHGIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQEGTLWWHGHV-SLLR- 133 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt~wYH~H~-~~~~- 133 (569)
..|.+..|++|++.+++.. . | ||..++.- | + +.-+-||..-...|.+ +++|+|+..|.. -|..
T Consensus 171 n~l~lP~g~~v~~~~tS~D-V---i--Hsf~ip~l----~---~-k~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD-V---I--HSWTVPAF----G---V-KQDAVPGRLAQLWFRA-EREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEESS-S---C--EEEEEGGG----T---E-EEEECBTCCEEEEEEC-CSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEECc-c---c--ceeeeccc----C---c-eEEecCCceeEEEEec-CCcEEEEEEChHhcccCc
Confidence 4699999999999999862 2 1 33333221 1 1 1225678888888998 999999999864 2222
Q ss_pred ccceeeEEEeCC
Q 008351 134 ATVYGALIIRPK 145 (569)
Q Consensus 134 ~Gl~G~liV~~~ 145 (569)
+.|.+.+.|.++
T Consensus 236 ~~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 AYMPITVKVVSE 247 (262)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 267777776654
No 150
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=41.44 E-value=26 Score=33.97 Aligned_cols=62 Identities=15% Similarity=0.188 Sum_probs=46.0
Q ss_pred eEEEEEcCcEEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEeCCCCceeEEEeeecc
Q 008351 211 YKLKVVEGKTYLLRIINAALNNQLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYA 290 (569)
Q Consensus 211 ~~~~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~~~~~ 290 (569)
..+.++.|+.+||++-.. +-.|.|.+.....++- .-||..-.+.+.++ .+|.|..+|.-+.
T Consensus 151 n~l~lP~g~~V~~~lTS~--DViHsf~IP~lg~k~D----------------aiPGr~n~~~~~~~-~~G~y~g~CsE~C 211 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN--SVMNSFFIPRLGSQIY----------------AMAGMQTRLHLIAN-EPGTYDGISASYS 211 (315)
T ss_dssp SBCCCCSSSEEEEEECBS--SSCEEEEEGGGTEEEE----------------ECBTSCEEEEEECC-SCBCCEEBCCSCC
T ss_pred ceEEEeCCCEEEEEEEeC--CccceeeecccCcEEe----------------ecCCcceeeEEecC-CCeEEEEeccccc
Confidence 357889999999988654 4457777775555442 24788888888888 7999999998654
Q ss_pred c
Q 008351 291 S 291 (569)
Q Consensus 291 ~ 291 (569)
.
T Consensus 212 G 212 (315)
T 1fft_B 212 G 212 (315)
T ss_dssp S
T ss_pred h
Confidence 3
No 151
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=38.71 E-value=65 Score=31.54 Aligned_cols=104 Identities=22% Similarity=0.269 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHHHHHhhcccc-----------------------cceEEEEEEEEEEEeccCceeeEE---EEEcCCCCC
Q 008351 2 ERSMLLLAFASVLIVSSTLAS-----------------------AAIVEHSFHVKNLTIGRLCRQRVI---TAVNGRLPG 55 (569)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~l~~~~~~~~~~g~~~~~---~~~NG~~Pg 55 (569)
+|-.+.++++.+++++...+. -.....+..++..+...-|++..+ ++=||.-|
T Consensus 201 rkv~~~~~~~t~~lV~~g~~~t~~~yP~tiPlQag~~~~i~Pl~~~~~~V~~~v~~A~Y~vpgR~l~~~~~VtN~g~~p- 279 (382)
T 1yew_A 201 RKVAMGFLAATILIVVMAMSSANSKYPITIPLQAGTMRGMKPLELPAPTVSVKVEDATYRVPGRAMRMKLTITNHGNSP- 279 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCCCCCBCCCCCCCCCCCSEEEEEEEEEEESSCSEEEEEEEEEECSSSC-
T ss_pred ceehhHHHHHHHHHhhhhHhhhhhcCCCcccccccccccccccCCCCCceEEEeeccEEecCCcEEEEEEEEEcCCCCc-
Q ss_pred CeEEEecCCEEEEEEEeCCCCceeEeee-------cccccCCCCCCCCCCcccccCCCCCeeEEEEEeCCCC
Q 008351 56 PTIRVHEGDTLVVHVFNESPYNITIHWH-------GIFQLLSPWADGPNMITQCPITPGRSYTYKFNVINQE 120 (569)
Q Consensus 56 P~i~~~~Gd~v~i~l~N~l~~~~~iH~H-------G~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~~~~ 120 (569)
+++.+=.+-.||+.|..-....--.- |+.+... .||+|||+.+.+.++ +.+
T Consensus 280 --vrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~-----------~pI~PGETr~~~v~a-~da 337 (382)
T 1yew_A 280 --IRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDN-----------SPLAPGETRTVDVTA-SDA 337 (382)
T ss_dssp --EEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCC-----------SCBCTTCEEEEEEEE-ECH
T ss_pred --eEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCC-----------CCcCCCceeEEEEEe-ehH
No 152
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=38.36 E-value=63 Score=26.61 Aligned_cols=69 Identities=19% Similarity=0.362 Sum_probs=38.3
Q ss_pred EEEcCCCCCCeEEEecCCEEEEEEE---eCCCCc--eeEee--ecccccC-CCCCCCCCCcccccCCCCCeeEEEEEe
Q 008351 47 TAVNGRLPGPTIRVHEGDTLVVHVF---NESPYN--ITIHW--HGIFQLL-SPWADGPNMITQCPITPGRSYTYKFNV 116 (569)
Q Consensus 47 ~~~NG~~PgP~i~~~~Gd~v~i~l~---N~l~~~--~~iH~--HG~~~~~-~~~~DG~~~~tq~~i~pG~~~~y~~~~ 116 (569)
+.++|--+.+.=.+..|+.+.|.+. |..... +.+|+ .|+..+- ....|+=.+ ..|||.+|+.++|.+..
T Consensus 16 V~V~~C~~~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 16 VMVDGCHGSDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp EEETTCCBTSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEE
T ss_pred EEECCCCCCCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEe
Confidence 3444421345667888988877776 222222 23332 2444331 111233222 56999999999999876
No 153
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=37.38 E-value=60 Score=26.78 Aligned_cols=70 Identities=26% Similarity=0.372 Sum_probs=39.4
Q ss_pred EEEcCCCCCCeEEEecCCEEEEEEE---eCCCCceeEeee----ccccc-CCCCCCCCCCcccccCCCCCeeEEEEEeC
Q 008351 47 TAVNGRLPGPTIRVHEGDTLVVHVF---NESPYNITIHWH----GIFQL-LSPWADGPNMITQCPITPGRSYTYKFNVI 117 (569)
Q Consensus 47 ~~~NG~~PgP~i~~~~Gd~v~i~l~---N~l~~~~~iH~H----G~~~~-~~~~~DG~~~~tq~~i~pG~~~~y~~~~~ 117 (569)
+.++|= +.+.=.+..|+.+.|.+. |..........| |+..+ +....|+=..-..|||.+|+.++|.+.++
T Consensus 18 V~V~~C-~~~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 18 VNVSPC-PTQPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp EEEESC-SSSSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred EEECCC-CCCCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 344442 346677888988887776 222222222233 33332 11112443212469999999999998874
No 154
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=36.86 E-value=44 Score=31.34 Aligned_cols=44 Identities=20% Similarity=0.178 Sum_probs=27.0
Q ss_pred EEEEEEEEEEeccCceeeEEEEEcCC---------CC----CCeEEEecCCEEEEEEEe
Q 008351 27 EHSFHVKNLTIGRLCRQRVITAVNGR---------LP----GPTIRVHEGDTLVVHVFN 72 (569)
Q Consensus 27 ~~~l~~~~~~~~~~g~~~~~~~~NG~---------~P----gP~i~~~~Gd~v~i~l~N 72 (569)
+-++.++...-. -...++|.-+|. .| -|..|+++|+.-.||+..
T Consensus 45 ~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~ 101 (257)
T 3q48_A 45 EVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAY 101 (257)
T ss_dssp EEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEEEE
T ss_pred EEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEEEE
Confidence 445555543222 234566777653 11 389999999888788765
No 155
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=35.24 E-value=1.2e+02 Score=29.15 Aligned_cols=76 Identities=16% Similarity=0.178 Sum_probs=53.6
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
+.+.++.|+.|++.+.+.+ ..|.|.+=.... -+.+-||....+.|.++
T Consensus 189 N~lvlP~g~~V~~~ltS~D----ViHsf~iP~lg~----------------------------k~daiPG~~n~~~~~~~ 236 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTATD----VIHAWTIPAFAV----------------------------KQDAVPGRIAQLWFSVD 236 (298)
T ss_dssp SCEEEESSSEEEEEEEESS----SCEEEEEGGGTE----------------------------EEEECTTCCEEEEEECS
T ss_pred ceEEEEcCCEEEEEEEeCC----ccceeeEcccCc----------------------------eEEecCCceEEEEEEeC
Confidence 4578999999999999754 567665532211 12234666777899999
Q ss_pred CceeEEEeecccccc-ccccEEEEEEecC
Q 008351 525 NPGVWFVHCHLDVHL-PWGLATAFVVENG 552 (569)
Q Consensus 525 npG~w~~HCHil~H~-d~GM~~~~~V~~~ 552 (569)
.||.|...|.-.--. +..|-..++|.+.
T Consensus 237 ~~G~y~g~CsE~CG~~Hs~M~~~v~vvs~ 265 (298)
T 3hb3_B 237 QEGVYFGQCSELCGINHAYMPIVVKAVSQ 265 (298)
T ss_dssp SSEEEEECCCSCCSTTTTSCCEEEEEECH
T ss_pred CCEEEEEEcccccCcCccCCeeEEEEEcH
Confidence 999999999976644 4566677777643
No 156
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=33.97 E-value=55 Score=27.05 Aligned_cols=49 Identities=18% Similarity=0.232 Sum_probs=26.3
Q ss_pred EEEEEeCCCCc---eeEeeecccccCCC---CCCCCCCcccccCCCCCeeEEEEEe
Q 008351 67 VVHVFNESPYN---ITIHWHGIFQLLSP---WADGPNMITQCPITPGRSYTYKFNV 116 (569)
Q Consensus 67 ~i~l~N~l~~~---~~iH~HG~~~~~~~---~~DG~~~~tq~~i~pG~~~~y~~~~ 116 (569)
+|++.|....+ .+-||.=....+.- .-+||-| .|--|.||++|+|.=-.
T Consensus 34 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~YtSg~ 88 (127)
T 2f1e_A 34 SIRIQNAGAVPARLVARHWQITDGNGRTEQVDGEGVVG-EQPWLRPGEAFHYTSGV 88 (127)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEESSBTT-BCCEECTTCEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEeCCc
Confidence 47777876654 34566533211100 0155543 23458999988876543
No 157
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=32.28 E-value=51 Score=27.18 Aligned_cols=49 Identities=20% Similarity=0.146 Sum_probs=25.9
Q ss_pred EEEEEeCCCCce---eEeeecccccCC---CCCCCCCCcccccCCCCCeeEEEEEe
Q 008351 67 VVHVFNESPYNI---TIHWHGIFQLLS---PWADGPNMITQCPITPGRSYTYKFNV 116 (569)
Q Consensus 67 ~i~l~N~l~~~~---~iH~HG~~~~~~---~~~DG~~~~tq~~i~pG~~~~y~~~~ 116 (569)
+|++.|....+. +-||.=....+. -.-+||-| .|--|.||++|+|.=-.
T Consensus 33 ~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G~GVVG-~qP~L~PGe~f~YtSg~ 87 (126)
T 1xvs_A 33 LITIKNLSSQTVQLMSRRWLITDADGKQTVVEGDGVVG-EQPRIKANDEYTYSSGT 87 (126)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEEESBTT-BCCEECTTCEEEEEEEE
T ss_pred EEEEEECCCCCEEEEecEEEEEeCCCCEEEEECCceEc-CCCcCCCCCceEEeCCc
Confidence 477778766543 456653221110 00145543 23458999988776543
No 158
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=31.21 E-value=68 Score=26.87 Aligned_cols=34 Identities=15% Similarity=0.295 Sum_probs=29.6
Q ss_pred EEEe-CCceeEEEeeccccccccccEEEEEEecCC
Q 008351 520 RFQA-NNPGVWFVHCHLDVHLPWGLATAFVVENGP 553 (569)
Q Consensus 520 rf~a-dnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 553 (569)
+|.. +.+|.+-|=|=+..|=..||-+.+.|....
T Consensus 76 ~v~L~~~~G~~YFicg~~gHC~~GmKl~I~V~~~~ 110 (138)
T 1jer_A 76 VIERLDELGMHYFVCTVGTHCSNGQKLSINVVAAN 110 (138)
T ss_dssp EEEECCSSEEEEEECCSTTTGGGTCEEEEEEECCC
T ss_pred EEEeccCCcCEEEEcCCCCccccCCEEEEEEcCCC
Confidence 3566 889999999999999999999999998654
No 159
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=29.13 E-value=18 Score=29.99 Aligned_cols=19 Identities=21% Similarity=0.214 Sum_probs=16.8
Q ss_pred EEEEEcCcEEEEEEEecCC
Q 008351 212 KLKVVEGKTYLLRIINAAL 230 (569)
Q Consensus 212 ~~~v~~G~~~rlRliN~~~ 230 (569)
.|.|+.||+|||.+.|-+.
T Consensus 72 ~InV~~GETVrF~v~nkt~ 90 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKIV 90 (131)
T ss_dssp EEEEETTCEEEEEETTEEE
T ss_pred EEEecCCCEEEEEeCCcEE
Confidence 4999999999999988873
No 160
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=28.98 E-value=55 Score=27.02 Aligned_cols=49 Identities=16% Similarity=0.286 Sum_probs=28.9
Q ss_pred EEEEEEEecCCCCeEEEEEeCceeEEEEecCCCC----CceEeeEEEEcCCcEEEE
Q 008351 220 TYLLRIINAALNNQLFFKIANHKFTVVSVDASYT----DPYVTDVVVIAPGQTTDV 271 (569)
Q Consensus 220 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~----~p~~~d~v~l~pgeR~dv 271 (569)
.|++||-|.+... ..|-...+.+...||... ..+-...=.|.|||.+..
T Consensus 32 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Y 84 (127)
T 2f1e_A 32 AYSIRIQNAGAVP---ARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHY 84 (127)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEE
T ss_pred EEEEEEEeCCCCC---EEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEE
Confidence 5889999998654 344555555555555422 112223446888886655
No 161
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=28.47 E-value=49 Score=27.28 Aligned_cols=50 Identities=16% Similarity=0.227 Sum_probs=30.0
Q ss_pred EEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCC----ceEeeEEEEcCCcEEEEE
Q 008351 220 TYLLRIINAALNNQLFFKIANHKFTVVSVDASYTD----PYVTDVVVIAPGQTTDVL 272 (569)
Q Consensus 220 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~----p~~~d~v~l~pgeR~dv~ 272 (569)
.|++||-|.+... ..|-...+.+...||...+ .+-...=.|.|||.+...
T Consensus 31 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Yt 84 (126)
T 1xvs_A 31 AYLITIKNLSSQT---VQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYS 84 (126)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEE
T ss_pred EEEEEEEECCCCC---EEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEe
Confidence 5889999998654 4555556666666665321 111234467888866553
No 162
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=27.91 E-value=72 Score=26.78 Aligned_cols=49 Identities=18% Similarity=0.177 Sum_probs=25.7
Q ss_pred EEEEEeCCCCce---eEeeecccccCCC---CCCCCCCcccccCCCCCeeEEEEEe
Q 008351 67 VVHVFNESPYNI---TIHWHGIFQLLSP---WADGPNMITQCPITPGRSYTYKFNV 116 (569)
Q Consensus 67 ~i~l~N~l~~~~---~iH~HG~~~~~~~---~~DG~~~~tq~~i~pG~~~~y~~~~ 116 (569)
+|++.|....+. +-||.=....+.- .-+||-| .|--|.||++|+|.=-.
T Consensus 38 ~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G~GVVG-eqPvL~PGe~F~YtSg~ 92 (139)
T 1xq4_A 38 TVRITNTGSHPAQVISRHWIITDGEERVQEVRGLGVVG-QQPLLAPGETFEYTSGC 92 (139)
T ss_dssp EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEEESSSS-CCCEECTTCEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEECCCeec-CCCcCCCCCceEEcCCc
Confidence 467777766543 4466532211100 0145533 23458999988776543
No 163
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=27.86 E-value=1.9e+02 Score=21.73 Aligned_cols=45 Identities=13% Similarity=0.068 Sum_probs=33.4
Q ss_pred eeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEeCCCCceeEEEe
Q 008351 242 KFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAA 286 (569)
Q Consensus 242 ~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~~~G~y~l~~ 286 (569)
.++|+..||.|+....++-=.+.-+|-|.+.....+..|.+.|.+
T Consensus 4 ~v~V~d~~GkPV~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~~ 48 (82)
T 3e8v_A 4 SVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLTA 48 (82)
T ss_dssp EEEEECTTSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEEEC
T ss_pred EEEEEcCCCCCCCCCEEEEEEEEchheeEEEEEEECCCceEEEEE
Confidence 578889999999777777666667888888766655667766543
No 164
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=26.66 E-value=53 Score=27.42 Aligned_cols=50 Identities=16% Similarity=0.312 Sum_probs=29.8
Q ss_pred EEEEEEEecCCCCeEEEEEeCceeEEEEecCCCCC----ceEeeEEEEcCCcEEEEE
Q 008351 220 TYLLRIINAALNNQLFFKIANHKFTVVSVDASYTD----PYVTDVVVIAPGQTTDVL 272 (569)
Q Consensus 220 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~----p~~~d~v~l~pgeR~dv~ 272 (569)
.|++||-|.+... +.|-...+.+...||...+ .+-...=.|.|||.+...
T Consensus 31 aY~ItI~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~Yt 84 (134)
T 1tza_A 31 SYTITIINLGEQA---AKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYT 84 (134)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEE
T ss_pred EEEEEEEeCCCCC---EEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEc
Confidence 5899999998654 4455555666566654320 111234468888866553
No 165
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=25.55 E-value=1.7e+02 Score=28.56 Aligned_cols=68 Identities=19% Similarity=0.219 Sum_probs=42.8
Q ss_pred cEEEEEEEecCCCCeEEE-E---EeC---ceeEEEEecCCCCC----------ceEeeEEEEcCCcEEEEEEEeCC----
Q 008351 219 KTYLLRIINAALNNQLFF-K---IAN---HKFTVVSVDASYTD----------PYVTDVVVIAPGQTTDVLLKADQ---- 277 (569)
Q Consensus 219 ~~~rlRliN~~~~~~~~~-~---i~g---h~~~via~DG~~~~----------p~~~d~v~l~pgeR~dv~v~~~~---- 277 (569)
-.+..-|-|.|... +.| + +|+ ..|.| ..||..+. |-.-+-+.|+|||.+++.+++.+
T Consensus 38 ~~vk~tvtN~g~~~-~~lLk~~~lD~~~~~~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydL 115 (343)
T 2x3c_A 38 VRVNLTLTNTGDKP-IRLLKWQLPGSDDAPLFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDM 115 (343)
T ss_dssp CEEEEEEEECSSSC-EEEEGGGSCSSSCCCCEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTC
T ss_pred eEEEEEEEeCCCCc-eEeeccCCCCcCccceEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhcccc
Confidence 45566667766544 222 1 122 34555 46775441 22246899999999999999874
Q ss_pred -CCceeEEEeee
Q 008351 278 -PVGSYYMAARA 288 (569)
Q Consensus 278 -~~G~y~l~~~~ 288 (569)
.+|.|.++...
T Consensus 116 s~gG~y~v~~~g 127 (343)
T 2x3c_A 116 SAQGQYSIRYQL 127 (343)
T ss_dssp CSCEEEEEEEC-
T ss_pred CCCceEEEEEee
Confidence 46888888754
No 166
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=25.06 E-value=1.2e+02 Score=27.81 Aligned_cols=18 Identities=28% Similarity=0.671 Sum_probs=13.7
Q ss_pred eEEEEcCCcEEEEEEEeCCCCcee
Q 008351 259 DVVVIAPGQTTDVLLKADQPVGSY 282 (569)
Q Consensus 259 d~v~l~pgeR~dv~v~~~~~~G~y 282 (569)
..|.|.|||++.+ .||.|
T Consensus 172 ~~i~L~PGESiTl------~Pg~~ 189 (246)
T 3kmh_A 172 SQLRLSPGESICL------PPGLY 189 (246)
T ss_dssp CEEEECTTCEEEE------CTTEE
T ss_pred CEEEECCCCeEec------CCCCE
Confidence 6789999998865 46664
No 167
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: b.34.5.2 b.40.4.5
Probab=24.82 E-value=1.7e+02 Score=24.43 Aligned_cols=50 Identities=10% Similarity=0.005 Sum_probs=32.5
Q ss_pred CCceEEEcCcCCCCCCCCCCCCcceEEEEEcCc----EEEEEEEecCCCCeEEEEEe-CceeEE
Q 008351 187 ISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGK----TYLLRIINAALNNQLFFKIA-NHKFTV 245 (569)
Q Consensus 187 ~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~----~~rlRliN~~~~~~~~~~i~-gh~~~v 245 (569)
.+..+.+||+++. -...-.++||+ .+|+++.|.-+...+.-.+. ++++.+
T Consensus 14 kG~~i~~~g~p~~---------Vve~~~~KpGKhG~A~vr~k~knl~tG~~~e~tf~s~~~ve~ 68 (138)
T 1iz6_A 14 PGRYIIIDDEPCR---------IVNITVSSPGKHGSAKARIEAVGIFDGKVRSIVKPTSAEVDV 68 (138)
T ss_dssp TTSEEEETTEEEE---------EEEEEECCCCTTSCCEEEEEEEETTTCCEEEEEEETTSEEEE
T ss_pred CCCEEEECCEEEE---------EEEEEeecCCCCCceEEEEEEEECCCCCEEEEEecCCCEEee
Confidence 3558899999652 23445667776 58999999876665544443 555555
No 168
>2a3m_A COG3005: nitrate/TMAO reductases, membrane-bound cytochrome C subunit; tetraheme cytochrome, electron transport; HET: HEM; 1.50A {Desulfovibrio desulfuricans subsp} PDB: 2a3p_A*
Probab=24.81 E-value=16 Score=30.41 Aligned_cols=8 Identities=25% Similarity=0.625 Sum_probs=0.0
Q ss_pred ChhhhHHH
Q 008351 1 MERSMLLL 8 (569)
Q Consensus 1 m~~~~~~~ 8 (569)
|+||++++
T Consensus 1 Mkk~~~~~ 8 (130)
T 2a3m_A 1 MRKSLFAV 8 (130)
T ss_dssp --------
T ss_pred CchhHHHH
Confidence 88887766
No 169
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=24.62 E-value=1e+02 Score=24.22 Aligned_cols=50 Identities=12% Similarity=0.179 Sum_probs=31.9
Q ss_pred EEEEEEEeCCCCc---eeEeeec--ccccCCCCCCCCCCcccccCCCCCeeEEEEEeC-CCCcc
Q 008351 65 TLVVHVFNESPYN---ITIHWHG--IFQLLSPWADGPNMITQCPITPGRSYTYKFNVI-NQEGT 122 (569)
Q Consensus 65 ~v~i~l~N~l~~~---~~iH~HG--~~~~~~~~~DG~~~~tq~~i~pG~~~~y~~~~~-~~~Gt 122 (569)
.++|+|+|-|+.+ ..++.-| +...-. ..-..|.||++..+++... ..+|.
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL~~~~~--------~~~~~v~pg~~~~~~~~~~P~~~G~ 78 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGLQRPKI--------LNVGDIGGNETVTLRQSFVPVRPGP 78 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTTEEEEE--------EEECCBCTTCEEEEEEEECCCSCSS
T ss_pred EEEEEEECCCCCcccCEEEEEECCCCCcceE--------EEcCcCCCCCEEEEEEEEecCcccc
Confidence 5789999999864 3455554 322211 1113599999999998873 45564
No 170
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=24.19 E-value=2.7e+02 Score=22.23 Aligned_cols=63 Identities=11% Similarity=0.101 Sum_probs=35.5
Q ss_pred CCeEEEecCCEEEEEEEeCCCCceeEeee-----------cccccCCCCC-CCCCCcccccCCCCCeeEEEEEeCCCCcc
Q 008351 55 GPTIRVHEGDTLVVHVFNESPYNITIHWH-----------GIFQLLSPWA-DGPNMITQCPITPGRSYTYKFNVINQEGT 122 (569)
Q Consensus 55 gP~i~~~~Gd~v~i~l~N~l~~~~~iH~H-----------G~~~~~~~~~-DG~~~~tq~~i~pG~~~~y~~~~~~~~Gt 122 (569)
|-+|.++.||++.|.|.-+-.....=... |+.+... +. |..+ .-.+..|....+.|++ ..+|+
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~-y~~~~~~---~~~vG~gG~~~~~f~a-~~~G~ 88 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCK-YTPTPSS---TPMVGVGGIYVVLVKP-RKRGH 88 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEE-EECCCCS---SSSSCCCCEEEEEEEE-CSSSS
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEe-EEeCCCC---CCCcCCCceEEEEEEE-eCCce
Confidence 45899999999999998664322211111 1111000 00 1110 0125668889999998 77785
No 171
>3er0_A Eukaryotic translation initiation factor 5A-2; yeast, low resolution, acetylation, hypusine, phosphoprotein, protein biosynthesis; 3.35A {Saccharomyces cerevisiae}
Probab=23.75 E-value=1.5e+02 Score=25.57 Aligned_cols=50 Identities=18% Similarity=0.125 Sum_probs=32.0
Q ss_pred CCceEEEcCcCCCCCCCCCCCCcceEEEEEcCc----EEEEEEEecCCCCeEEEEEe-CceeEE
Q 008351 187 ISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGK----TYLLRIINAALNNQLFFKIA-NHKFTV 245 (569)
Q Consensus 187 ~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~----~~rlRliN~~~~~~~~~~i~-gh~~~v 245 (569)
.+..+.+||+++. -.....++||+ .+|+++.|.-+...+.-.+. ++++.+
T Consensus 38 kG~~I~idG~p~~---------Vve~~~~KpGKHG~A~vr~k~knl~TG~k~E~tf~s~~kve~ 92 (167)
T 3er0_A 38 KNGFVVIKSRPCK---------IVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTHNMEV 92 (167)
T ss_dssp TTCEEEETTEEEE---------EEEEEEECCSSSSCCEEEEEEEESSSCCCEEEEEESSSEEEE
T ss_pred CCCEEEECCEEEE---------EEEEEEeCCCCcCceEEEEEEEEcCCCCEEEEEEcCCCcccc
Confidence 4558999999652 23445678888 58888888876665543332 444444
No 172
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=23.61 E-value=1.9e+02 Score=26.42 Aligned_cols=75 Identities=9% Similarity=0.202 Sum_probs=51.2
Q ss_pred eEEEccCCCEEEEEEEeCCCCCCCCCCeeeecCcEEEEEeCcCcCCcccccccccCCCCCccceEEeCCCcEEEEEEEeC
Q 008351 445 SVKTLKFNSTVEIVLQNTALIAVENHPIHIHGFDFHVLAQGFGNYNAARDIKKFNLVNPQRRNTIAVPVGGWAVIRFQAN 524 (569)
Q Consensus 445 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vl~~g~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 524 (569)
+.+.++.|+.+++.+.+.+ ..|.|-+=.... ..| .-||..-.+.|.++
T Consensus 140 n~lvlP~~~~Vr~~vtS~D----ViHsf~vP~lg~-------------------------K~D---aiPGr~n~~~~~~~ 187 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED----VLHSWAVPSLGL-------------------------KTD---AIPGRLNQTTLMSS 187 (227)
T ss_dssp SCEEEETTSCEEEEEEESS----SCEEEEEGGGTE-------------------------EEE---ECTTCCEEEEECCS
T ss_pred ceEEEecCCEEEEEEEeCc----ccceeeecccCc-------------------------EEE---ecCCceEEEEEecC
Confidence 4578899999999998753 566655432211 123 23456666789999
Q ss_pred CceeEEEeecccccccc-ccEEEEEEec
Q 008351 525 NPGVWFVHCHLDVHLPW-GLATAFVVEN 551 (569)
Q Consensus 525 npG~w~~HCHil~H~d~-GM~~~~~V~~ 551 (569)
.||.|...|.-.-.... -|-..++|.+
T Consensus 188 ~~G~y~g~Cse~CG~~Hs~M~~~v~vv~ 215 (227)
T 1v54_B 188 RPGLYYGQCSEICGSNHSFMPIVLELVP 215 (227)
T ss_dssp SCEEEEECCCSCCSTTGGGCCEEEEEEC
T ss_pred CcEEEEEEehhhcccccccCeEEEEEEc
Confidence 99999999988776644 4556666653
No 173
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=23.53 E-value=2.4e+02 Score=21.54 Aligned_cols=69 Identities=12% Similarity=0.047 Sum_probs=37.1
Q ss_pred EEEcCcEEEEEEEecCCCCeEEEEEeC--ceeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEeCC--CCceeEEEeee
Q 008351 214 KVVEGKTYLLRIINAALNNQLFFKIAN--HKFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKADQ--PVGSYYMAARA 288 (569)
Q Consensus 214 ~v~~G~~~rlRliN~~~~~~~~~~i~g--h~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~--~~G~y~l~~~~ 288 (569)
.-+||+++++|++-..... ... .+ ..+++..-+|..+. .-.........++..+.+++ ..|.|.|++..
T Consensus 12 iYrPGetV~~~~~~~~~~~-~p~--~~~~~~v~l~dp~g~~v~---~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 12 IYKPGQTVKFRVVSMDENF-HPL--NELIPLVYIQDPKGNRIA---QWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp EECTTCEEEEEEEEECGGG-CBC--CCEEEEEEEECTTSCEEE---EEEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred ccCCCCEEEEEEEEECCCC-cCC--CCCceEEEEECCCCCEEE---EEEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 3578999999987554221 111 11 13455555554321 11122223446666666654 35899998764
No 174
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=23.14 E-value=3.1e+02 Score=22.38 Aligned_cols=67 Identities=15% Similarity=0.080 Sum_probs=42.9
Q ss_pred EEEcCcEE--EEEEEecCCCCeEEEEEeCceeEEEEecCCCCCceEeeEEEEcCCcEEEEEEEeCC-CCceeEEEeeec
Q 008351 214 KVVEGKTY--LLRIINAALNNQLFFKIANHKFTVVSVDASYTDPYVTDVVVIAPGQTTDVLLKADQ-PVGSYYMAARAY 289 (569)
Q Consensus 214 ~v~~G~~~--rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~v~l~pgeR~dv~v~~~~-~~G~y~l~~~~~ 289 (569)
.+++|+.+ +..+-|.|....-.+.+ .++ .||..+. ...+.|++|+...|.+.... .+|.|.|.+...
T Consensus 28 ~v~~G~~~ti~vtV~N~G~~~a~~~~V-----~ly-vng~~v~---t~~v~La~G~s~tv~f~~~~~~~G~~~v~AvVD 97 (127)
T 3idu_A 28 VVGVNKLAEYEVHVKNLGGIGVPSTKV-----RVY-INGTLYK---NWTVSLGPKEEKVLTFNWTPTQEGMYRINATVD 97 (127)
T ss_dssp EECTTCCEEEEEEEEECSSSCEEEEEE-----EEE-ETTEEEE---EEEEEECTTCEEEEEEEECCSSCEEEEEEEEES
T ss_pred cccCCCEEEEEEEEEECCCCccCCcEE-----EEE-ECCEEEe---eEEeccCCCCeEEEEEEEEcCCCcEEEEEEEEc
Confidence 55667665 56778999766433332 222 2565442 22457999999888887653 578898877654
No 175
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=22.91 E-value=58 Score=27.34 Aligned_cols=49 Identities=18% Similarity=0.317 Sum_probs=27.6
Q ss_pred EEEEEEEecCCCCeEEEEEeCceeEEEEecCCCC----CceEeeEEEEcCCcEEEE
Q 008351 220 TYLLRIINAALNNQLFFKIANHKFTVVSVDASYT----DPYVTDVVVIAPGQTTDV 271 (569)
Q Consensus 220 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~----~p~~~d~v~l~pgeR~dv 271 (569)
.|++||-|.+... +.|-...+.+...||... ..+-...=.|.|||.+..
T Consensus 36 aY~ItI~N~~~~~---vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~Y 88 (139)
T 1xq4_A 36 AYTVRITNTGSHP---AQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEY 88 (139)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEE
T ss_pred EEEEEEEeCCCCC---EEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEE
Confidence 5889999998654 344444555555555421 011123346788876655
No 176
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=22.90 E-value=1.3e+02 Score=29.89 Aligned_cols=53 Identities=19% Similarity=0.251 Sum_probs=0.0
Q ss_pred EEEEEEEeCCCCc--------eeEeeecccccCCC--CCC------CCCCcccccCCCCCeeEEEEEeCCCC
Q 008351 65 TLVVHVFNESPYN--------ITIHWHGIFQLLSP--WAD------GPNMITQCPITPGRSYTYKFNVINQE 120 (569)
Q Consensus 65 ~v~i~l~N~l~~~--------~~iH~HG~~~~~~~--~~D------G~~~~tq~~i~pG~~~~y~~~~~~~~ 120 (569)
++.++|+|+.+.+ .++++-.-...... +.| |.. ..+ ||+|||+.+.+.++ +.+
T Consensus 301 ~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a-~da 369 (419)
T 3rfr_A 301 TINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKI-QDA 369 (419)
T ss_dssp EEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEE-ECH
T ss_pred EEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEe-ehH
No 177
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=22.30 E-value=97 Score=25.02 Aligned_cols=33 Identities=24% Similarity=0.392 Sum_probs=28.5
Q ss_pred EEEeCCceeEEEeeccccccccccEEEE-EEecC
Q 008351 520 RFQANNPGVWFVHCHLDVHLPWGLATAF-VVENG 552 (569)
Q Consensus 520 rf~adnpG~w~~HCHil~H~d~GM~~~~-~V~~~ 552 (569)
.|..+.+|.+-|=|=...|=..||-+.+ .|...
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~ 106 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAG 106 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC-
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCC
Confidence 4667899999999999999999999999 88654
No 178
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=21.54 E-value=81 Score=25.70 Aligned_cols=67 Identities=21% Similarity=0.226 Sum_probs=39.2
Q ss_pred EcCCCCC------CeEEEecC-CEEEEEEEeCCCCceeE--eeecccccCCCCCCC---------CCCcccccCCCCCee
Q 008351 49 VNGRLPG------PTIRVHEG-DTLVVHVFNESPYNITI--HWHGIFQLLSPWADG---------PNMITQCPITPGRSY 110 (569)
Q Consensus 49 ~NG~~Pg------P~i~~~~G-d~v~i~l~N~l~~~~~i--H~HG~~~~~~~~~DG---------~~~~tq~~i~pG~~~ 110 (569)
.+..+|| -.|++++| ++++|+|.|..++++.+ |+|=....+.--.|= .|.=|.....||++.
T Consensus 4 ~~~miPGei~~~~g~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k 83 (126)
T 4ac7_B 4 NNYIVPGEYRVAEGEIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEM 83 (126)
T ss_dssp -CCCCTTCEECCSSEEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEE
T ss_pred CCCCCCCeEEeCCCCEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeE
Confidence 3445565 26888888 68999999999887654 666444333211121 111123446677776
Q ss_pred EEEEE
Q 008351 111 TYKFN 115 (569)
Q Consensus 111 ~y~~~ 115 (569)
+.+..
T Consensus 84 ~V~LV 88 (126)
T 4ac7_B 84 EVELT 88 (126)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
No 179
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=21.54 E-value=81 Score=25.70 Aligned_cols=67 Identities=21% Similarity=0.226 Sum_probs=39.2
Q ss_pred EcCCCCC------CeEEEecC-CEEEEEEEeCCCCceeE--eeecccccCCCCCCC---------CCCcccccCCCCCee
Q 008351 49 VNGRLPG------PTIRVHEG-DTLVVHVFNESPYNITI--HWHGIFQLLSPWADG---------PNMITQCPITPGRSY 110 (569)
Q Consensus 49 ~NG~~Pg------P~i~~~~G-d~v~i~l~N~l~~~~~i--H~HG~~~~~~~~~DG---------~~~~tq~~i~pG~~~ 110 (569)
.+..+|| -.|++++| ++++|+|.|..++++.+ |+|=....+.--.|= .|.=|.....||++.
T Consensus 4 ~~~miPGei~~~~g~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k 83 (126)
T 4ubp_B 4 NNYIVPGEYRVAEGEIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEM 83 (126)
T ss_dssp -CCCCTTCEECCSSEEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEE
T ss_pred CCCCCCCeEEeCCCCEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeE
Confidence 3445565 26888888 68999999999887654 666444333211121 111123446677776
Q ss_pred EEEEE
Q 008351 111 TYKFN 115 (569)
Q Consensus 111 ~y~~~ 115 (569)
+.+..
T Consensus 84 ~V~LV 88 (126)
T 4ubp_B 84 EVELT 88 (126)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66654
No 180
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=20.50 E-value=34 Score=26.85 Aligned_cols=24 Identities=21% Similarity=0.144 Sum_probs=21.0
Q ss_pred EEEEEcCCCCCCeEEEecCCEEEE
Q 008351 45 VITAVNGRLPGPTIRVHEGDTLVV 68 (569)
Q Consensus 45 ~~~~~NG~~PgP~i~~~~Gd~v~i 68 (569)
..+++||+.-.+.-.++.||+|+|
T Consensus 59 ~~V~Vng~~v~~d~~L~dGDRVEI 82 (97)
T 2hj1_A 59 NKIGIFSRPIKLTDVLKEGDRIEI 82 (97)
T ss_dssp SEEEEEECSCCTTCBCCTTCEEEE
T ss_pred cEEEEcCEECCCCccCCCCCEEEE
Confidence 578999998778888999999987
No 181
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=20.11 E-value=2.4e+02 Score=21.49 Aligned_cols=56 Identities=23% Similarity=0.201 Sum_probs=27.9
Q ss_pred EEEEEEEeCCCCCCCCCCeeeecCcEEE--EEeCcCcCCccccc-ccccCCCCCccceEEeCCCcEE
Q 008351 454 TVEIVLQNTALIAVENHPIHIHGFDFHV--LAQGFGNYNAARDI-KKFNLVNPQRRNTIAVPVGGWA 517 (569)
Q Consensus 454 ~ve~~l~N~~~~~~~~HP~HlHG~~F~V--l~~g~g~~~~~~~~-~~~~~~~p~~rDTv~vp~~g~~ 517 (569)
+.+|+|. ++..-++|.|.++..+ +..|.......... ....+ .--|++.+|.|.+-
T Consensus 19 V~r~~i~-----PG~~~~~H~H~~~~e~~~v~~G~~~v~~~d~~~~~~~l---~~G~~~~ip~G~~H 77 (98)
T 3lag_A 19 VTEWRLP-----PGSATGHHTHGMDYVVVPMADGEMTIVAPDGTRSLAQL---KTGRSYARKAGVQH 77 (98)
T ss_dssp EEEEEEC-----TTEECCSEECCSCEEEEESSCBC-CEECTTSCEECCCB---CTTCCEEECTTCEE
T ss_pred EEEEEEC-----CCCccCcEECCCcEEEEEEeccEEEEEeCCCceEEEEe---cCCcEEEEcCCCcE
Confidence 3455553 3467899999987544 43443332211000 01111 12477778877654
No 182
>1bkb_A Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum} SCOP: b.34.5.2 b.40.4.5
Probab=20.03 E-value=2e+02 Score=23.81 Aligned_cols=50 Identities=14% Similarity=0.138 Sum_probs=32.6
Q ss_pred CCceEEEcCcCCCCCCCCCCCCcceEEEEEcCcE----EEEEEEecCCCCeEEEEEe-CceeEE
Q 008351 187 ISDAYTINGKPGDLYPCSQNPNQIYKLKVVEGKT----YLLRIINAALNNQLFFKIA-NHKFTV 245 (569)
Q Consensus 187 ~~~~~liNG~~~~~~~~~~~~~~~~~~~v~~G~~----~rlRliN~~~~~~~~~~i~-gh~~~v 245 (569)
.+..+.+||+++. -.....++||+. +|+++.|.-+-..+.-.+. ++++.+
T Consensus 16 kG~~i~~~g~p~~---------Vve~~~~KpGKgG~A~vr~k~knl~tG~~~e~tf~s~~kve~ 70 (136)
T 1bkb_A 16 EGSYVVIDGEPCR---------VVEIEKSKTGKHGSAKARIVAVGVFDGGKRTLSLPVDAQVEV 70 (136)
T ss_dssp TTCEEEETTEEEE---------EEEEEEECCSTTSCCEEEEEEEETTTCCEEEEEEETTSEEEE
T ss_pred CCCEEEECCEEEE---------EEEEEEecCCCCCceEEEEEEEECCCCCeEEEEEcCCCEeee
Confidence 3558999999652 234556777763 7999999876665544443 565555
Done!