Query 008355
Match_columns 568
No_of_seqs 204 out of 2575
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 22:46:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008355.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008355hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1237 H+/oligopeptide sympor 100.0 2.1E-43 4.5E-48 376.9 38.6 530 24-564 32-569 (571)
2 COG3104 PTR2 Dipeptide/tripept 100.0 1.2E-40 2.6E-45 338.0 27.5 469 20-561 12-493 (498)
3 PRK10207 dipeptide/tripeptide 100.0 1.2E-36 2.5E-41 325.2 39.1 466 25-567 10-488 (489)
4 TIGR00924 yjdL_sub1_fam amino 100.0 4.3E-36 9.3E-41 320.7 37.2 453 25-560 6-473 (475)
5 PRK15462 dipeptide/tripeptide 100.0 7.3E-36 1.6E-40 314.5 37.7 474 26-562 6-486 (493)
6 PRK09584 tppB putative tripept 100.0 3.1E-34 6.8E-39 308.1 38.2 457 25-560 17-484 (500)
7 TIGR00926 2A1704 Peptide:H+ sy 100.0 3.8E-26 8.2E-31 248.8 37.0 334 43-432 1-341 (654)
8 TIGR01299 synapt_SV2 synaptic 99.9 1.1E-25 2.5E-30 248.0 32.0 155 49-229 186-353 (742)
9 PRK05122 major facilitator sup 99.9 2.5E-25 5.5E-30 233.4 32.7 380 28-559 14-393 (399)
10 PRK03545 putative arabinose tr 99.9 1.4E-25 3.1E-30 234.5 28.8 381 28-565 8-389 (390)
11 PRK11646 multidrug resistance 99.9 4.4E-25 9.4E-30 231.5 30.6 373 32-552 13-385 (400)
12 PRK12382 putative transporter; 99.9 9.9E-25 2.1E-29 228.3 31.2 375 28-554 14-388 (392)
13 PRK10489 enterobactin exporter 99.9 1.4E-24 3E-29 229.2 29.9 392 30-565 18-409 (417)
14 TIGR00887 2A0109 phosphate:H+ 99.9 5.7E-25 1.2E-29 237.6 27.5 448 27-567 14-500 (502)
15 PRK11551 putative 3-hydroxyphe 99.9 1.6E-24 3.4E-29 227.8 29.7 174 26-226 12-185 (406)
16 PRK10077 xylE D-xylose transpo 99.9 2.7E-25 5.9E-30 238.9 23.9 186 28-228 11-212 (479)
17 PRK10054 putative transporter; 99.9 1E-24 2.2E-29 228.2 26.4 175 26-227 4-178 (395)
18 PRK11663 regulatory protein Uh 99.9 9.6E-25 2.1E-29 231.5 26.4 168 29-223 23-190 (434)
19 COG2814 AraJ Arabinose efflux 99.9 4.6E-24 1E-28 215.3 29.8 378 26-557 10-388 (394)
20 TIGR00903 2A0129 major facilit 99.9 3.7E-24 7.9E-29 221.3 28.1 161 41-229 3-163 (368)
21 PRK10504 putative transporter; 99.9 8.3E-24 1.8E-28 226.9 31.1 178 28-232 9-186 (471)
22 PRK14995 methyl viologen resis 99.9 8.5E-24 1.8E-28 227.9 30.8 403 27-514 4-413 (495)
23 TIGR00879 SP MFS transporter, 99.9 1.4E-24 3.1E-29 232.1 24.0 143 64-229 70-215 (481)
24 COG2271 UhpC Sugar phosphate p 99.9 9.6E-25 2.1E-29 217.1 19.3 175 26-228 24-203 (448)
25 TIGR00900 2A0121 H+ Antiporter 99.9 8E-24 1.7E-28 218.3 26.9 359 33-513 3-362 (365)
26 PRK10213 nepI ribonucleoside t 99.9 4.4E-23 9.5E-28 215.9 30.4 176 23-225 14-189 (394)
27 PRK09874 drug efflux system pr 99.9 1.2E-23 2.6E-28 221.1 25.9 381 29-557 14-400 (408)
28 TIGR00893 2A0114 d-galactonate 99.9 1.7E-23 3.7E-28 217.8 26.1 154 50-229 14-167 (399)
29 PRK10642 proline/glycine betai 99.9 1.1E-22 2.3E-27 219.1 32.8 176 28-222 15-204 (490)
30 PRK09705 cynX putative cyanate 99.9 4.2E-23 9.2E-28 216.0 28.7 367 40-562 20-388 (393)
31 PRK11273 glpT sn-glycerol-3-ph 99.9 2.4E-23 5.2E-28 222.0 26.7 172 33-227 29-204 (452)
32 TIGR00899 2A0120 sugar efflux 99.9 1.1E-22 2.3E-27 211.3 29.2 169 35-229 3-174 (375)
33 PRK09952 shikimate transporter 99.9 2.3E-22 5.1E-27 213.4 32.3 177 26-221 19-210 (438)
34 TIGR00898 2A0119 cation transp 99.9 3.5E-23 7.5E-28 224.1 26.5 388 55-565 114-504 (505)
35 PRK10406 alpha-ketoglutarate t 99.9 1.6E-22 3.4E-27 214.5 30.9 175 30-223 23-211 (432)
36 TIGR00891 2A0112 putative sial 99.9 6.1E-23 1.3E-27 215.1 27.5 173 25-224 8-182 (405)
37 PRK09556 uhpT sugar phosphate 99.9 1.2E-23 2.6E-28 225.2 22.4 173 31-224 27-205 (467)
38 PRK15402 multidrug efflux syst 99.9 1.8E-22 3.9E-27 212.3 30.4 166 36-228 20-185 (406)
39 TIGR00890 2A0111 Oxalate/Forma 99.9 2.7E-23 5.9E-28 215.1 23.3 157 44-228 18-174 (377)
40 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.2E-22 2.5E-27 214.0 28.0 177 27-230 6-188 (412)
41 PF07690 MFS_1: Major Facilita 99.9 2.6E-23 5.7E-28 213.5 22.5 169 35-229 2-170 (352)
42 PRK12307 putative sialic acid 99.9 8.1E-23 1.8E-27 216.2 26.7 166 27-219 16-181 (426)
43 TIGR00711 efflux_EmrB drug res 99.9 1.8E-22 3.9E-27 217.2 27.2 404 31-513 4-409 (485)
44 PRK03699 putative transporter; 99.9 7.3E-22 1.6E-26 206.8 30.9 174 26-226 4-178 (394)
45 TIGR00894 2A0114euk Na(+)-depe 99.9 1.1E-22 2.5E-27 217.7 25.2 147 59-229 70-217 (465)
46 PRK10091 MFS transport protein 99.9 4.9E-22 1.1E-26 207.2 29.2 172 29-227 3-174 (382)
47 PRK03633 putative MFS family t 99.9 4.8E-22 1E-26 207.3 28.9 157 28-211 5-161 (381)
48 KOG0569 Permease of the major 99.9 1.2E-22 2.7E-27 211.0 23.8 395 68-565 63-464 (485)
49 PRK11195 lysophospholipid tran 99.9 8.4E-22 1.8E-26 206.1 29.3 165 29-224 3-167 (393)
50 PLN00028 nitrate transmembrane 99.9 3.4E-22 7.4E-27 214.2 26.0 174 28-229 35-217 (476)
51 cd06174 MFS The Major Facilita 99.9 7.6E-22 1.7E-26 202.0 27.4 346 32-552 2-349 (352)
52 TIGR00710 efflux_Bcr_CflA drug 99.9 1.5E-21 3.2E-26 203.4 30.0 175 28-229 4-178 (385)
53 TIGR00897 2A0118 polyol permea 99.9 2.3E-21 4.9E-26 203.6 31.3 171 26-219 10-181 (402)
54 TIGR00895 2A0115 benzoate tran 99.9 6.6E-22 1.4E-26 206.5 26.7 172 28-226 16-187 (398)
55 PRK15011 sugar efflux transpor 99.9 1.6E-21 3.4E-26 204.2 29.6 175 28-229 14-192 (393)
56 TIGR00892 2A0113 monocarboxyla 99.9 2.3E-22 5E-27 214.3 22.7 151 54-231 43-194 (455)
57 PRK09528 lacY galactoside perm 99.9 9E-22 1.9E-26 207.9 26.0 397 28-559 9-407 (420)
58 TIGR00902 2A0127 phenyl propri 99.9 4E-21 8.6E-26 200.4 30.4 366 30-550 5-374 (382)
59 PRK11652 emrD multidrug resist 99.9 3.4E-21 7.4E-26 201.7 28.7 172 27-225 6-177 (394)
60 KOG0254 Predicted transporter 99.9 1.4E-21 3E-26 211.5 26.3 398 66-566 90-494 (513)
61 PRK15075 citrate-proton sympor 99.9 8.6E-21 1.9E-25 201.3 31.5 172 28-218 14-199 (434)
62 PRK03893 putative sialic acid 99.9 1.7E-21 3.7E-26 210.3 25.6 168 26-220 17-184 (496)
63 TIGR00712 glpT glycerol-3-phos 99.9 1.4E-21 2.9E-26 207.7 23.6 154 52-228 49-203 (438)
64 PRK15403 multidrug efflux syst 99.9 1.3E-20 2.9E-25 198.3 29.8 154 48-228 35-188 (413)
65 TIGR00881 2A0104 phosphoglycer 99.9 9.2E-22 2E-26 203.9 20.5 151 52-228 17-168 (379)
66 PRK11043 putative transporter; 99.9 1.5E-20 3.3E-25 197.3 28.6 163 41-229 15-179 (401)
67 PRK11102 bicyclomycin/multidru 99.9 1.8E-20 4E-25 194.8 28.5 156 46-228 8-163 (377)
68 TIGR00889 2A0110 nucleoside tr 99.9 5E-20 1.1E-24 194.2 31.6 389 33-560 6-407 (418)
69 KOG1330 Sugar transporter/spin 99.9 8.6E-22 1.9E-26 197.9 16.9 184 24-234 28-212 (493)
70 PF05977 MFS_3: Transmembrane 99.9 3.9E-20 8.5E-25 197.8 30.3 361 29-515 10-370 (524)
71 PRK15034 nitrate/nitrite trans 99.9 4.3E-20 9.4E-25 193.0 28.5 180 28-230 33-231 (462)
72 TIGR00882 2A0105 oligosacchari 99.9 3.9E-20 8.5E-25 193.9 28.3 390 29-553 2-393 (396)
73 TIGR00792 gph sugar (Glycoside 99.9 7.7E-20 1.7E-24 194.1 30.3 357 37-516 7-382 (437)
74 PRK10473 multidrug efflux syst 99.9 1.3E-19 2.7E-24 189.7 31.4 170 31-227 5-174 (392)
75 PRK11128 putative 3-phenylprop 99.9 9.7E-20 2.1E-24 189.9 29.2 342 34-515 9-356 (382)
76 KOG2532 Permease of the major 99.9 5.4E-21 1.2E-25 201.0 18.4 377 59-555 67-447 (466)
77 PRK06814 acylglycerophosphoeth 99.9 5.5E-20 1.2E-24 218.0 28.6 136 65-226 52-190 (1140)
78 PRK10133 L-fucose transporter; 99.9 2E-19 4.3E-24 190.6 29.6 152 28-203 25-176 (438)
79 PRK08633 2-acyl-glycerophospho 99.9 1.3E-19 2.7E-24 215.3 31.0 156 28-206 8-165 (1146)
80 PF00854 PTR2: POT family; In 99.9 1.7E-21 3.7E-26 202.2 12.8 366 96-497 1-369 (372)
81 TIGR00886 2A0108 nitrite extru 99.9 2.8E-20 6.2E-25 192.5 20.4 159 30-215 2-171 (366)
82 PF00083 Sugar_tr: Sugar (and 99.8 1.8E-24 3.9E-29 230.7 -13.7 396 66-567 47-448 (451)
83 TIGR00883 2A0106 metabolite-pr 99.8 3.8E-19 8.3E-24 185.2 26.1 156 51-224 14-184 (394)
84 PRK11010 ampG muropeptide tran 99.8 3.5E-18 7.5E-23 183.7 33.4 176 28-228 11-192 (491)
85 COG2223 NarK Nitrate/nitrite t 99.8 6.9E-19 1.5E-23 175.9 25.4 391 26-559 11-405 (417)
86 PRK11902 ampG muropeptide tran 99.8 1.3E-17 2.8E-22 175.2 33.4 167 35-226 5-177 (402)
87 TIGR00896 CynX cyanate transpo 99.8 8.9E-19 1.9E-23 180.8 21.9 145 48-221 19-165 (355)
88 TIGR00885 fucP L-fucose:H+ sym 99.8 1.3E-17 2.8E-22 175.2 29.8 171 32-226 6-202 (410)
89 KOG2615 Permease of the major 99.8 3.6E-18 7.8E-23 167.4 20.4 132 47-205 46-181 (451)
90 TIGR01301 GPH_sucrose GPH fami 99.8 3.4E-17 7.4E-22 172.4 29.4 442 31-559 6-475 (477)
91 TIGR00901 2A0125 AmpG-related 99.8 9E-18 2E-22 173.3 24.4 156 50-229 8-176 (356)
92 KOG3764 Vesicular amine transp 99.8 2.6E-18 5.6E-23 169.3 16.9 177 31-232 23-248 (464)
93 KOG0255 Synaptic vesicle trans 99.8 2.7E-17 5.8E-22 178.7 25.4 383 58-562 111-499 (521)
94 PRK09669 putative symporter Ya 99.8 7.1E-17 1.5E-21 171.9 27.2 178 31-228 11-201 (444)
95 PF03825 Nuc_H_symport: Nucleo 99.8 2.3E-16 5E-21 164.0 30.0 383 34-558 7-398 (400)
96 KOG0252 Inorganic phosphate tr 99.8 2.5E-18 5.5E-23 172.2 13.6 405 62-566 81-508 (538)
97 PRK10429 melibiose:sodium symp 99.8 2E-16 4.3E-21 169.7 28.8 368 32-517 9-396 (473)
98 TIGR00806 rfc RFC reduced fola 99.8 4.9E-17 1.1E-21 167.1 22.1 157 47-231 43-203 (511)
99 PRK09848 glucuronide transport 99.8 7.1E-16 1.5E-20 164.4 31.6 365 31-517 10-391 (448)
100 TIGR00805 oat sodium-independe 99.8 9.9E-17 2.1E-21 176.7 25.2 198 27-231 30-281 (633)
101 KOG0253 Synaptic vesicle trans 99.7 5.5E-16 1.2E-20 151.0 24.5 432 36-562 84-526 (528)
102 TIGR02718 sider_RhtX_FptX side 99.7 1.2E-15 2.5E-20 159.7 28.7 177 31-230 3-183 (390)
103 COG0738 FucP Fucose permease [ 99.7 1E-15 2.2E-20 152.2 26.2 150 33-205 16-165 (422)
104 PF13347 MFS_2: MFS/sugar tran 99.7 4.6E-16 1E-20 164.8 22.9 362 37-519 9-389 (428)
105 PF01306 LacY_symp: LacY proto 99.7 2.5E-16 5.5E-21 161.0 19.3 392 28-561 6-406 (412)
106 PF06609 TRI12: Fungal trichot 99.7 2.9E-15 6.4E-20 160.0 27.6 150 51-228 65-214 (599)
107 TIGR00788 fbt folate/biopterin 99.7 8.6E-15 1.9E-19 156.3 29.7 379 30-515 27-414 (468)
108 KOG2504 Monocarboxylate transp 99.7 4.1E-15 9E-20 158.5 22.6 425 31-555 44-476 (509)
109 PTZ00207 hypothetical protein; 99.7 7.6E-14 1.6E-18 150.2 31.3 175 26-226 25-200 (591)
110 PRK11462 putative transporter; 99.7 4.7E-14 1E-18 150.5 28.7 179 32-228 12-201 (460)
111 COG2807 CynX Cyanate permease 99.7 4.3E-14 9.4E-19 138.7 24.4 327 50-516 32-361 (395)
112 KOG2533 Permease of the major 99.6 4.8E-14 1E-18 149.0 24.7 149 58-232 74-228 (495)
113 PF11700 ATG22: Vacuole efflux 99.6 1.1E-12 2.4E-17 139.2 30.8 90 451-555 379-468 (477)
114 PRK10642 proline/glycine betai 99.6 1.2E-14 2.7E-19 156.6 14.2 178 28-229 249-428 (490)
115 COG2211 MelB Na+/melibiose sym 99.6 2.3E-12 4.9E-17 133.4 30.1 370 28-516 11-398 (467)
116 KOG2325 Predicted transporter/ 99.5 7.7E-14 1.7E-18 144.5 12.8 191 21-233 26-231 (488)
117 PRK15011 sugar efflux transpor 99.5 3.6E-13 7.8E-18 141.0 17.6 177 27-230 214-390 (393)
118 PF03209 PUCC: PUCC protein; 99.5 5.4E-11 1.2E-15 120.0 29.2 376 56-551 6-394 (403)
119 PRK09556 uhpT sugar phosphate 99.5 6.7E-13 1.4E-17 142.3 14.4 176 29-228 258-446 (467)
120 KOG4686 Predicted sugar transp 99.5 1.2E-13 2.6E-18 130.2 7.5 400 31-559 46-447 (459)
121 TIGR00890 2A0111 Oxalate/Forma 99.5 6.5E-13 1.4E-17 137.3 13.6 170 29-223 205-374 (377)
122 PRK09952 shikimate transporter 99.4 1.3E-12 2.8E-17 138.8 15.1 182 27-230 248-432 (438)
123 TIGR00889 2A0110 nucleoside tr 99.4 1E-12 2.2E-17 138.6 13.7 180 30-232 209-403 (418)
124 PRK05122 major facilitator sup 99.4 1.6E-12 3.4E-17 136.4 14.9 169 38-235 225-393 (399)
125 TIGR00899 2A0120 sugar efflux 99.4 2.4E-12 5.2E-17 133.5 16.1 171 31-228 201-371 (375)
126 COG2271 UhpC Sugar phosphate p 99.4 1.1E-12 2.4E-17 131.5 12.2 179 28-229 251-432 (448)
127 TIGR00883 2A0106 metabolite-pr 99.4 9.1E-13 2E-17 137.1 12.0 167 30-220 220-390 (394)
128 PRK11551 putative 3-hydroxyphe 99.4 2.7E-12 5.8E-17 134.9 14.5 171 32-229 223-394 (406)
129 cd06174 MFS The Major Facilita 99.4 6E-12 1.3E-16 128.6 15.6 172 30-227 176-348 (352)
130 KOG2563 Permease of the major 99.4 5.6E-11 1.2E-15 120.1 21.5 182 31-233 43-237 (480)
131 PRK03699 putative transporter; 99.4 4.9E-12 1.1E-16 132.5 14.7 170 29-225 205-374 (394)
132 TIGR00902 2A0127 phenyl propri 99.4 7.8E-12 1.7E-16 130.4 15.4 170 29-227 205-375 (382)
133 PRK09528 lacY galactoside perm 99.4 2.1E-12 4.6E-17 136.5 11.0 173 30-228 224-400 (420)
134 PRK09874 drug efflux system pr 99.4 5.2E-12 1.1E-16 132.7 13.9 169 35-229 225-396 (408)
135 PRK09705 cynX putative cyanate 99.4 1.8E-11 3.9E-16 128.2 17.2 176 30-233 206-383 (393)
136 TIGR01299 synapt_SV2 synaptic 99.4 6.3E-12 1.4E-16 139.5 14.2 135 69-230 599-733 (742)
137 TIGR00880 2_A_01_02 Multidrug 99.4 2.8E-12 6E-17 112.6 8.9 134 70-229 3-136 (141)
138 TIGR00893 2A0114 d-galactonate 99.3 1.7E-11 3.7E-16 127.4 15.6 176 29-227 215-395 (399)
139 PRK03545 putative arabinose tr 99.3 3.3E-11 7.1E-16 126.1 17.3 173 31-231 207-380 (390)
140 PRK10489 enterobactin exporter 99.3 5.4E-12 1.2E-16 133.2 11.4 160 45-230 239-398 (417)
141 PRK12382 putative transporter; 99.3 1.6E-11 3.5E-16 128.4 13.8 163 38-229 225-387 (392)
142 PRK15075 citrate-proton sympor 99.3 1.5E-11 3.3E-16 130.5 13.3 153 35-210 244-398 (434)
143 PRK11273 glpT sn-glycerol-3-ph 99.3 1.9E-11 4E-16 130.6 13.7 176 29-228 253-432 (452)
144 TIGR00891 2A0112 putative sial 99.3 1.4E-11 3E-16 129.0 12.5 156 34-215 243-400 (405)
145 TIGR00897 2A0118 polyol permea 99.3 5.1E-11 1.1E-15 125.2 16.6 177 29-229 222-399 (402)
146 PRK11663 regulatory protein Uh 99.3 2.1E-11 4.5E-16 129.4 13.7 177 29-228 243-421 (434)
147 COG2270 Permeases of the major 99.3 5.6E-10 1.2E-14 112.5 22.7 129 48-199 34-170 (438)
148 PRK03633 putative MFS family t 99.3 5E-11 1.1E-15 124.3 16.0 159 38-226 209-367 (381)
149 PRK10406 alpha-ketoglutarate t 99.3 4.1E-11 8.8E-16 127.2 15.0 168 38-229 252-422 (432)
150 PRK11010 ampG muropeptide tran 99.3 4.3E-11 9.3E-16 128.9 14.5 179 31-231 224-403 (491)
151 COG2223 NarK Nitrate/nitrite t 99.3 4.2E-11 9.1E-16 120.4 13.2 185 28-232 217-402 (417)
152 PF11700 ATG22: Vacuole efflux 99.3 7.7E-11 1.7E-15 125.2 15.7 185 27-231 279-468 (477)
153 PRK03893 putative sialic acid 99.3 5.3E-11 1.1E-15 128.6 14.5 148 47-218 293-440 (496)
154 TIGR00892 2A0113 monocarboxyla 99.2 7.8E-11 1.7E-15 125.8 14.3 171 29-225 241-415 (455)
155 TIGR00712 glpT glycerol-3-phos 99.2 8.2E-11 1.8E-15 125.1 13.6 179 29-231 251-433 (438)
156 TIGR00879 SP MFS transporter, 99.2 1.5E-10 3.2E-15 123.7 15.3 171 46-232 301-471 (481)
157 PRK15402 multidrug efflux syst 99.2 2.7E-10 5.8E-15 119.8 16.3 172 30-223 216-387 (406)
158 PF03092 BT1: BT1 family; Int 99.2 4.1E-09 8.8E-14 111.4 25.1 163 50-232 10-176 (433)
159 COG2814 AraJ Arabinose efflux 99.2 4.3E-10 9.4E-15 114.3 16.0 177 29-232 211-387 (394)
160 PRK11128 putative 3-phenylprop 99.2 3.1E-10 6.8E-15 118.3 15.4 168 29-225 205-373 (382)
161 TIGR00881 2A0104 phosphoglycer 99.2 1E-10 2.2E-15 121.0 11.1 162 29-213 216-379 (379)
162 PLN00028 nitrate transmembrane 99.2 4.5E-10 9.8E-15 120.6 16.2 173 31-231 254-433 (476)
163 PRK10504 putative transporter; 99.2 3.7E-10 8E-15 121.2 15.2 159 28-209 260-418 (471)
164 KOG4686 Predicted sugar transp 99.2 5.4E-10 1.2E-14 105.8 13.7 166 24-217 259-428 (459)
165 TIGR01272 gluP glucose/galacto 99.2 2.4E-09 5.3E-14 108.1 19.5 84 136-225 8-107 (310)
166 PRK11902 ampG muropeptide tran 99.1 4.6E-10 9.9E-15 118.0 13.7 177 29-231 209-390 (402)
167 KOG2816 Predicted transporter 99.1 7.2E-09 1.6E-13 109.1 22.4 362 32-516 21-394 (463)
168 TIGR01272 gluP glucose/galacto 99.1 7.6E-10 1.6E-14 111.8 14.2 163 28-219 139-303 (310)
169 TIGR00882 2A0105 oligosacchari 99.1 4.4E-10 9.5E-15 117.8 12.9 172 29-226 215-390 (396)
170 TIGR02332 HpaX 4-hydroxyphenyl 99.1 6.2E-10 1.3E-14 117.3 14.0 164 30-219 243-409 (412)
171 TIGR00900 2A0121 H+ Antiporter 99.1 4.6E-10 9.9E-15 115.5 12.3 155 29-208 210-365 (365)
172 TIGR00792 gph sugar (Glycoside 99.1 1.4E-10 3E-15 123.1 8.3 163 28-210 221-384 (437)
173 TIGR02718 sider_RhtX_FptX side 99.1 1.3E-09 2.8E-14 114.0 15.3 175 30-225 209-385 (390)
174 TIGR00896 CynX cyanate transpo 99.1 1.4E-09 3E-14 112.2 14.0 154 29-208 197-350 (355)
175 COG2270 Permeases of the major 99.1 1E-09 2.2E-14 110.6 12.2 173 28-226 251-424 (438)
176 PRK12307 putative sialic acid 99.1 2.3E-09 5E-14 113.4 14.8 148 42-214 244-391 (426)
177 TIGR00894 2A0114euk Na(+)-depe 99.1 2.6E-09 5.6E-14 114.5 15.3 177 28-228 260-447 (465)
178 TIGR00710 efflux_Bcr_CflA drug 99.1 2.3E-09 5E-14 111.5 14.6 164 29-215 206-370 (385)
179 PRK10091 MFS transport protein 99.1 2.9E-09 6.2E-14 111.1 15.2 171 31-228 201-373 (382)
180 KOG3626 Organic anion transpor 99.1 1.3E-08 2.8E-13 110.3 20.3 200 29-235 96-347 (735)
181 PF03137 OATP: Organic Anion T 99.0 2.5E-11 5.5E-16 130.7 -0.5 186 43-235 16-254 (539)
182 PRK10133 L-fucose transporter; 99.0 2.5E-09 5.4E-14 113.6 14.4 167 31-226 260-428 (438)
183 TIGR00895 2A0115 benzoate tran 99.0 1.5E-09 3.2E-14 113.2 12.0 147 30-203 251-397 (398)
184 PRK14995 methyl viologen resis 99.0 2.2E-09 4.8E-14 115.9 13.6 155 28-205 258-412 (495)
185 PRK10077 xylE D-xylose transpo 99.0 8.3E-09 1.8E-13 110.9 17.5 162 48-232 290-458 (479)
186 PRK10054 putative transporter; 99.0 2.9E-09 6.3E-14 111.6 13.4 175 28-228 205-381 (395)
187 PF05977 MFS_3: Transmembrane 99.0 3.3E-09 7.2E-14 114.0 14.0 173 29-227 218-390 (524)
188 TIGR00711 efflux_EmrB drug res 99.0 1.8E-09 3.9E-14 116.2 11.8 157 28-206 254-410 (485)
189 PRK10213 nepI ribonucleoside t 99.0 1.1E-08 2.4E-13 107.1 16.7 168 29-223 216-383 (394)
190 PRK15034 nitrate/nitrite trans 99.0 1.1E-08 2.4E-13 107.5 16.4 186 29-230 252-453 (462)
191 PF13347 MFS_2: MFS/sugar tran 99.0 9.8E-09 2.1E-13 108.8 16.1 164 28-210 224-388 (428)
192 PF05631 DUF791: Protein of un 99.0 1.4E-07 3E-12 94.1 22.3 154 57-233 61-218 (354)
193 TIGR00887 2A0109 phosphate:H+ 99.0 6.1E-09 1.3E-13 112.8 13.7 168 36-226 295-484 (502)
194 PRK11646 multidrug resistance 98.9 9.5E-09 2.1E-13 107.9 14.1 152 47-224 226-381 (400)
195 PRK08633 2-acyl-glycerophospho 98.9 9E-09 2E-13 122.8 15.2 164 29-218 232-397 (1146)
196 TIGR00903 2A0129 major facilit 98.9 3.2E-08 7E-13 102.5 15.1 167 28-227 191-361 (368)
197 PRK06814 acylglycerophosphoeth 98.9 1.6E-08 3.4E-13 120.6 14.3 182 28-218 224-409 (1140)
198 PRK11195 lysophospholipid tran 98.9 5.1E-08 1.1E-12 102.1 16.3 165 39-230 215-379 (393)
199 PF07690 MFS_1: Major Facilita 98.9 4.2E-09 9.2E-14 107.8 7.7 146 29-197 206-352 (352)
200 PRK11102 bicyclomycin/multidru 98.9 3.8E-08 8.3E-13 102.2 14.7 148 31-201 196-344 (377)
201 PRK09848 glucuronide transport 98.9 7.8E-09 1.7E-13 110.2 9.6 164 28-209 227-391 (448)
202 KOG2504 Monocarboxylate transp 98.8 1.9E-08 4E-13 107.8 11.9 176 29-231 298-476 (509)
203 PF03825 Nuc_H_symport: Nucleo 98.8 5.7E-08 1.2E-12 101.3 14.7 180 29-229 207-393 (400)
204 PRK11043 putative transporter; 98.8 7.5E-08 1.6E-12 101.1 15.6 153 35-210 209-361 (401)
205 TIGR00901 2A0125 AmpG-related 98.8 3.8E-08 8.3E-13 101.4 12.3 144 31-190 211-355 (356)
206 PRK10473 multidrug efflux syst 98.8 7E-08 1.5E-12 100.9 14.1 73 43-116 217-289 (392)
207 TIGR00898 2A0119 cation transp 98.8 2.5E-08 5.4E-13 108.1 10.7 133 71-229 361-493 (505)
208 COG2807 CynX Cyanate permease 98.8 2E-07 4.2E-12 92.4 15.5 166 29-220 208-374 (395)
209 KOG0253 Synaptic vesicle trans 98.8 1.1E-07 2.4E-12 93.8 13.0 146 29-200 326-490 (528)
210 KOG2532 Permease of the major 98.7 4.3E-08 9.3E-13 103.7 10.5 176 29-228 258-444 (466)
211 TIGR00886 2A0108 nitrite extru 98.7 9.7E-08 2.1E-12 98.6 11.7 142 29-193 225-366 (366)
212 PRK10429 melibiose:sodium symp 98.7 5.9E-08 1.3E-12 104.2 8.8 166 28-209 230-396 (473)
213 TIGR00885 fucP L-fucose:H+ sym 98.7 2.6E-07 5.6E-12 97.3 13.3 163 30-221 233-402 (410)
214 KOG3762 Predicted transporter 98.6 4.2E-06 9.1E-11 86.9 21.4 136 374-556 412-548 (618)
215 PF01306 LacY_symp: LacY proto 98.6 8.8E-08 1.9E-12 98.6 9.0 178 28-231 219-400 (412)
216 KOG0569 Permease of the major 98.6 1.7E-07 3.8E-12 98.3 11.3 188 29-235 269-458 (485)
217 PRK09669 putative symporter Ya 98.6 1.5E-07 3.3E-12 100.2 10.2 163 29-210 229-392 (444)
218 KOG3098 Uncharacterized conser 98.6 3.3E-05 7.2E-10 80.6 26.6 104 71-201 56-159 (461)
219 TIGR00880 2_A_01_02 Multidrug 98.6 1.7E-06 3.7E-11 75.3 13.9 131 379-556 9-139 (141)
220 PRK11652 emrD multidrug resist 98.6 1.9E-06 4.2E-11 90.1 16.5 144 44-211 222-365 (394)
221 COG2211 MelB Na+/melibiose sym 98.5 4.8E-07 1E-11 94.2 11.2 165 27-209 234-399 (467)
222 KOG3764 Vesicular amine transp 98.5 1.6E-07 3.4E-12 93.8 6.8 178 31-228 272-451 (464)
223 PRK15403 multidrug efflux syst 98.5 1.2E-06 2.7E-11 92.3 12.5 170 29-221 218-387 (413)
224 KOG1330 Sugar transporter/spin 98.5 5.3E-08 1.1E-12 99.2 1.9 143 372-560 72-214 (493)
225 PF06813 Nodulin-like: Nodulin 98.5 2.8E-06 6.1E-11 82.0 13.4 166 44-231 17-182 (250)
226 TIGR00924 yjdL_sub1_fam amino 98.4 1.9E-06 4.1E-11 92.6 11.7 184 31-230 274-467 (475)
227 PRK11462 putative transporter; 98.4 5.4E-06 1.2E-10 88.6 14.7 163 28-209 227-390 (460)
228 KOG3762 Predicted transporter 98.3 1.7E-06 3.6E-11 89.8 8.6 174 31-231 373-547 (618)
229 COG0738 FucP Fucose permease [ 98.3 5.6E-06 1.2E-10 83.4 11.9 158 28-214 235-392 (422)
230 KOG0252 Inorganic phosphate tr 98.3 5.6E-07 1.2E-11 91.6 4.5 180 29-230 304-497 (538)
231 KOG4332 Predicted sugar transp 98.3 1.8E-05 4E-10 74.9 14.1 149 54-228 61-217 (454)
232 COG0477 ProP Permeases of the 98.3 9.9E-06 2.1E-10 80.1 13.2 152 43-219 16-173 (338)
233 PF02487 CLN3: CLN3 protein; 98.2 0.00044 9.5E-09 71.2 23.4 131 68-230 62-194 (402)
234 PF01770 Folate_carrier: Reduc 98.2 9.1E-05 2E-09 76.2 17.9 156 49-231 23-182 (412)
235 KOG0637 Sucrose transporter an 98.2 1.8E-05 3.9E-10 80.8 12.3 166 29-203 32-202 (498)
236 PF03209 PUCC: PUCC protein; 98.2 3.1E-05 6.7E-10 78.8 13.9 168 38-227 217-394 (403)
237 PF00083 Sugar_tr: Sugar (and 98.1 4.6E-08 1E-12 104.3 -7.9 185 30-233 253-438 (451)
238 PF12832 MFS_1_like: MFS_1 lik 98.1 1.7E-05 3.6E-10 61.8 8.6 69 35-105 6-74 (77)
239 TIGR01301 GPH_sucrose GPH fami 98.1 2.1E-05 4.6E-10 83.5 11.8 205 24-233 253-473 (477)
240 KOG2533 Permease of the major 98.1 1.1E-05 2.3E-10 85.9 9.5 163 30-217 274-442 (495)
241 PRK09584 tppB putative tripept 98.1 3.7E-05 8E-10 83.1 13.6 149 36-201 279-439 (500)
242 PRK10207 dipeptide/tripeptide 98.0 3.4E-05 7.3E-10 83.1 11.5 149 38-203 278-438 (489)
243 TIGR00788 fbt folate/biopterin 97.9 1.1E-05 2.3E-10 86.5 5.3 136 57-208 280-415 (468)
244 PF06963 FPN1: Ferroportin1 (F 97.9 0.0047 1E-07 64.7 23.7 187 31-226 4-195 (432)
245 KOG3574 Acetyl-CoA transporter 97.8 0.0027 5.8E-08 63.7 19.9 159 25-203 27-192 (510)
246 PRK15462 dipeptide/tripeptide 97.8 0.00014 2.9E-09 77.7 11.7 115 407-556 74-190 (493)
247 PF06609 TRI12: Fungal trichot 97.8 0.00034 7.5E-09 75.8 13.9 154 25-202 306-463 (599)
248 TIGR00769 AAA ADP/ATP carrier 97.7 0.012 2.6E-07 62.4 24.6 160 28-204 6-189 (472)
249 TIGR00805 oat sodium-independe 97.7 8E-05 1.7E-09 82.7 8.6 133 371-514 71-234 (633)
250 TIGR00806 rfc RFC reduced fola 97.7 0.001 2.2E-08 69.7 14.7 85 406-511 89-173 (511)
251 KOG0254 Predicted transporter 97.6 0.00045 9.7E-09 75.1 12.3 185 27-225 292-476 (513)
252 PF05978 UNC-93: Ion channel r 97.4 0.0025 5.3E-08 57.0 11.9 105 69-200 41-145 (156)
253 PTZ00207 hypothetical protein; 97.4 0.0025 5.4E-08 69.5 14.0 119 406-556 88-206 (591)
254 KOG2563 Permease of the major 97.2 0.0026 5.6E-08 65.4 10.6 186 28-235 265-454 (480)
255 PF06779 DUF1228: Protein of u 97.0 0.0055 1.2E-07 48.2 8.9 68 47-116 10-77 (85)
256 KOG2615 Permease of the major 96.9 0.0064 1.4E-07 61.2 10.2 143 38-205 270-413 (451)
257 KOG0255 Synaptic vesicle trans 96.8 0.013 2.7E-07 63.9 12.6 113 392-550 138-250 (521)
258 KOG2325 Predicted transporter/ 96.8 0.011 2.4E-07 62.2 11.4 157 373-558 76-232 (488)
259 KOG2816 Predicted transporter 96.7 0.0042 9.2E-08 65.8 7.4 128 51-205 263-391 (463)
260 PF03137 OATP: Organic Anion T 96.5 0.00065 1.4E-08 73.7 0.0 173 29-207 305-515 (539)
261 PRK03612 spermidine synthase; 96.3 0.079 1.7E-06 57.4 14.3 173 34-228 19-195 (521)
262 PF00854 PTR2: POT family; In 96.0 0.047 1E-06 56.6 10.5 125 410-561 2-129 (372)
263 KOG3626 Organic anion transpor 95.8 0.062 1.3E-06 59.3 10.8 171 29-205 392-648 (735)
264 PF13000 Acatn: Acetyl-coenzym 95.4 3.2 6.9E-05 44.0 20.9 61 454-514 407-467 (544)
265 PF06813 Nodulin-like: Nodulin 95.4 0.15 3.3E-06 49.3 10.8 92 406-511 63-154 (250)
266 PF06963 FPN1: Ferroportin1 (F 95.2 0.28 6.1E-06 51.5 13.0 154 32-203 261-415 (432)
267 PF03092 BT1: BT1 family; Int 95.2 0.17 3.6E-06 53.7 11.4 115 410-557 60-177 (433)
268 COG3202 ATP/ADP translocase [E 95.2 5.1 0.00011 42.4 24.0 161 28-205 26-209 (509)
269 COG3104 PTR2 Dipeptide/tripept 95.2 0.14 3.1E-06 53.8 10.4 180 31-226 286-482 (498)
270 TIGR00926 2A1704 Peptide:H+ sy 94.7 1.9 4.2E-05 48.0 18.4 313 64-435 19-341 (654)
271 PF05978 UNC-93: Ion channel r 94.3 0.66 1.4E-05 41.4 11.1 61 451-511 88-148 (156)
272 KOG3880 Predicted small molecu 93.1 1.6 3.4E-05 43.2 12.0 59 451-509 341-399 (409)
273 KOG0637 Sucrose transporter an 92.7 0.19 4.2E-06 52.1 5.5 180 24-208 274-472 (498)
274 KOG3097 Predicted membrane pro 92.4 1.5 3.3E-05 43.7 11.0 119 25-171 25-143 (390)
275 PF02487 CLN3: CLN3 protein; 92.2 0.32 6.9E-06 50.4 6.5 61 137-203 334-394 (402)
276 KOG3810 Micronutrient transpor 91.6 0.99 2.1E-05 45.3 8.7 153 50-229 25-181 (433)
277 PF03219 TLC: TLC ATP/ADP tran 91.4 7.5 0.00016 41.8 15.9 164 28-205 23-205 (491)
278 KOG4332 Predicted sugar transp 90.2 2.2 4.8E-05 41.3 9.3 140 67-226 284-426 (454)
279 KOG3098 Uncharacterized conser 89.2 3.8 8.3E-05 43.4 11.3 109 74-196 288-404 (461)
280 TIGR00939 2a57 Equilibrative N 87.6 42 0.0009 35.6 28.3 59 451-509 371-429 (437)
281 TIGR00939 2a57 Equilibrative N 86.4 1.2 2.7E-05 47.1 5.7 58 137-200 371-428 (437)
282 TIGR00769 AAA ADP/ATP carrier 86.2 52 0.0011 35.2 18.5 55 459-513 135-190 (472)
283 PF05631 DUF791: Protein of un 84.5 41 0.00089 34.3 15.1 63 451-513 120-188 (354)
284 KOG1479 Nucleoside transporter 79.8 82 0.0018 32.8 25.9 57 451-507 342-398 (406)
285 COG0477 ProP Permeases of the 76.9 69 0.0015 30.5 14.1 63 452-514 94-158 (338)
286 PF01770 Folate_carrier: Reduc 75.2 95 0.0021 32.5 14.6 62 451-513 93-154 (412)
287 COG5336 Uncharacterized protei 74.4 11 0.00024 30.8 5.8 41 71-111 48-88 (116)
288 KOG4830 Predicted sugar transp 71.5 8.1 0.00017 37.3 5.2 67 32-100 20-95 (412)
289 PF01733 Nucleoside_tran: Nucl 69.9 1.3 2.8E-05 44.6 -0.4 158 28-200 142-304 (309)
290 PF07672 MFS_Mycoplasma: Mycop 66.9 86 0.0019 30.5 11.2 57 178-234 4-65 (267)
291 COG5336 Uncharacterized protei 62.9 60 0.0013 26.7 7.8 41 481-523 35-75 (116)
292 KOG1237 H+/oligopeptide sympor 62.3 37 0.0008 37.3 8.9 140 408-563 103-253 (571)
293 KOG3574 Acetyl-CoA transporter 62.0 31 0.00067 35.6 7.5 101 458-561 139-242 (510)
294 PF09527 ATPase_gene1: Putativ 60.7 36 0.00078 24.2 5.8 38 72-109 7-44 (55)
295 KOG1479 Nucleoside transporter 58.4 10 0.00022 39.3 3.6 129 51-198 265-397 (406)
296 KOG3810 Micronutrient transpor 57.8 1.4E+02 0.003 30.6 11.1 97 68-188 274-370 (433)
297 PF11947 DUF3464: Protein of u 54.7 33 0.00072 30.3 5.6 51 136-195 95-145 (153)
298 PF13000 Acatn: Acetyl-coenzym 53.0 1E+02 0.0022 33.1 9.8 34 471-504 137-170 (544)
299 PRK03612 spermidine synthase; 52.5 2.2E+02 0.0047 31.0 12.8 53 459-512 117-169 (521)
300 PF07857 DUF1632: CEO family ( 49.6 92 0.002 30.2 8.3 20 539-558 120-139 (254)
301 TIGR02230 ATPase_gene1 F0F1-AT 44.3 78 0.0017 25.8 5.8 32 75-106 52-83 (100)
302 PTZ00370 STEVOR; Provisional 41.9 64 0.0014 31.5 5.8 24 537-560 261-284 (296)
303 KOG2601 Iron transporter [Inor 38.8 1.9E+02 0.0042 29.9 8.8 82 31-113 29-110 (503)
304 PF06800 Sugar_transport: Suga 32.4 4.9E+02 0.011 25.5 11.0 23 408-430 135-157 (269)
305 PF06912 DUF1275: Protein of u 31.5 4.3E+02 0.0092 24.5 12.1 33 185-218 167-199 (209)
306 TIGR01667 YCCS_YHJK integral m 28.1 4.5E+02 0.0097 29.9 10.6 48 89-154 50-97 (701)
307 PF02694 UPF0060: Uncharacteri 25.7 3.8E+02 0.0083 22.1 8.0 51 64-115 53-103 (107)
308 PF01102 Glycophorin_A: Glycop 25.1 1E+02 0.0022 26.2 3.7 24 537-560 71-94 (122)
309 PF04281 Tom22: Mitochondrial 23.5 3.2E+02 0.007 23.7 6.6 23 478-500 61-83 (137)
310 COG2119 Predicted membrane pro 23.2 4.2E+02 0.009 24.3 7.4 36 73-109 142-177 (190)
311 PF12273 RCR: Chitin synthesis 20.4 48 0.001 28.5 0.9 13 210-222 1-13 (130)
No 1
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-43 Score=376.85 Aligned_cols=530 Identities=54% Similarity=0.917 Sum_probs=464.1
Q ss_pred cCCCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHH
Q 008355 24 KTGNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFS 103 (568)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~ 103 (568)
.+..|++...++..+.++++++|++..++..|+.+.+|.+...+...+..+.......++.+++++|.|+||.+++.++.
T Consensus 32 ~~g~~~s~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s 111 (571)
T KOG1237|consen 32 KTGGWLSAPFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGS 111 (571)
T ss_pred eechhHhHHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 56679999999999999999999999999999999999999989999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCC-CC---CC-CCCCC-CCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhh
Q 008355 104 IIYCLGMTLLTLTASVSGLKP-SC---DK-DACHP-TGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREK 177 (568)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~-~~---~~-~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 177 (568)
++..+|..++.+++.+|.+.. .| .. ..|+. .......++.++.+.++|.|+..|+..++-+|++++..+.++..
T Consensus 112 ~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~ 191 (571)
T KOG1237|consen 112 LISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKG 191 (571)
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhC
Confidence 999999999998888887766 43 11 12454 44566788999999999999999999999999999766666666
Q ss_pred hhhhhhhHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhh
Q 008355 178 KSSFFNWFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRK 257 (568)
Q Consensus 178 r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (568)
+...|+++++..++|..++-.+..++.+..||.+.|.++.+..++++++++...+.++..+|.+++..++.+++..+.++
T Consensus 192 ~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g~~~y~~~~p~gsp~t~i~~Vlvaa~~k 271 (571)
T KOG1237|consen 192 IPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPGFPFYRYKKPRGSPKTRIGQVLVAAAFK 271 (571)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcCceeEEeeCCCCCchhHHHHHHHHHHHH
Confidence 77999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCC-CCCCCcccchhhHHHHHHHHHHHHHHHh
Q 008355 258 SNVVVPADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKG-SADPWRLCTVTQVEELKAIIRLLPVWAS 336 (568)
Q Consensus 258 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (568)
++..++.+++.+ ++.....+.....+...++|+++++...+..++ ...+|+.+..+++++.|..++.++++..
T Consensus 272 ~~~~~~~~~~~~------~~~~~~~~~~~~t~~f~~l~kaa~~~~~~~~~~~~~~~w~lct~~~Vee~K~~lr~~Pi~~~ 345 (571)
T KOG1237|consen 272 RKAVVSLDPEEL------YYDCTDSVAIEGTKPFRFLDKAALKTSDDLKDGLDANPWRLCTVTQVEEVKAVLRLLPIWLT 345 (571)
T ss_pred HhccCCCcchhc------cccccccccccCCcccchhhHhhccCCcccccccccCCccCCCceehhhhhhhhhhhHHHHH
Confidence 888877665444 111111122223456778888887766544333 6678999999999999999999999999
Q ss_pred hhHHHhhhccccceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHH
Q 008355 337 GIVFATVYSQMSTMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGL 416 (568)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~ 416 (568)
...++..+.|+.+.+..|+..++++.++++.+|++.++.+..+..++..|+.+++..|+.+|..+++++.+++.++.+|+
T Consensus 346 ~i~~~~~~aq~~t~~v~Q~~~mdr~~~~~f~ip~asl~~f~~~~~~~~iplydr~~vP~~~~~t~~~~~~t~lqrig~G~ 425 (571)
T KOG1237|consen 346 TIIYSTVYAQMVTFFVLQATTMDRHLGSNFKIPAASLQVFILLSILIFIPLYDRVIVPFARKLTGNPFGITPLQRIGIGL 425 (571)
T ss_pred HHHHHHHHHhhhhheehhhhhcCCCCCCCeEeCchhHHHHHHHHHHhhhhhcceeehhhhhhhcCCCCCCChhheeeccc
Confidence 99999999999999999999999999844999999999999999999999999999999999988777789999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHH
Q 008355 417 LISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTT 496 (568)
Q Consensus 417 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~ 496 (568)
.+..+++...+.++.+|...... ......+++.+|+++++++.|++|++.+++..++.++++|++||+.+++++.+.
T Consensus 426 ~~si~sm~~aa~vE~krl~~~~~---~~~~~~~mSi~W~iPQyvLig~~Evf~~vg~lEFfY~qaP~sMkS~~~al~l~t 502 (571)
T KOG1237|consen 426 VLSILSMAVAGIVEAKRLKTAVS---LLVETNPMSILWQIPQYVLLGAGEVFTSVGGLEFFYSQAPESMKSVATALWLLT 502 (571)
T ss_pred hHHHHHHHHHHHHHHHHhhhhhh---ccCCCCCeeHHHHHHHHHHHHHHHHHHhhhhHHHhHhhCCHHHHHHHHHHHHHH
Confidence 99999999999999888765533 122357799999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhccCCCccCCC-CCCccchhHHHHHHHHHHHHHHHHHHHHHhhhceecccc
Q 008355 497 VAVGNYLSTLLVTIVTKVTTKNGKLGWIP-DNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFTYKKAT 564 (568)
Q Consensus 497 ~~lg~~lg~~l~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~~~~ 564 (568)
..+|+.++.+++..+...+.. ..+|++ +++|.+..+.+||+++..+.+....+.+..++++.++.+
T Consensus 503 ~a~G~~lss~Lv~~v~~~t~~--~~~w~~~~~ln~~~ld~Fy~lla~~~~~n~~~~~~~~~~y~~~~~~ 569 (571)
T KOG1237|consen 503 VAVGNYLSSVLVSLVQFSTGK--AAEWLGFANLNKGRLDYFYWLLAVYSAVNFLYFLICAKRYDYKDDK 569 (571)
T ss_pred HHHHHHHHHHHHHHHHHhcCC--CcccCChhHhhhhHHHHHHHHHHHHHhhhhhheEEEEEeeeecccc
Confidence 999999999999987766543 347999 899999999999999999999999998888888777554
No 2
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-40 Score=337.97 Aligned_cols=469 Identities=22% Similarity=0.340 Sum_probs=358.4
Q ss_pred CCCccCCCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhC----CChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCc
Q 008355 20 ANKKKTGNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLN----QGNVTASNNVTNWSGTCYITPLIGAFLADSYMGR 95 (568)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg----~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Gr 95 (568)
..+...+++|.++.++..++.|+++||++...+..|+..+++ +|.+++.-..++|....++.++++||++||++|+
T Consensus 12 ~~~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~ 91 (498)
T COG3104 12 LEMKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGT 91 (498)
T ss_pred cccccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 345556789999999999999999999999999999999988 9999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhh
Q 008355 96 FWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGER 175 (568)
Q Consensus 96 k~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 175 (568)
|++++.|.++.++|.++++... ......++++.++.++|.|.+.|+.+++++|++|+++++
T Consensus 92 ~~tI~lGail~~iGh~~L~~~~-----------------~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr-- 152 (498)
T COG3104 92 RRTIVLGAILMAIGHLVLAISS-----------------VSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR-- 152 (498)
T ss_pred hHHHHHHHHHHHHHHHHHhccc-----------------cccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc--
Confidence 9999999999999999998762 023667999999999999999999999999999998876
Q ss_pred hhhhhhhhhHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCC--CCChhH------HH
Q 008355 176 EKKSSFFNWFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKP--GGSPLT------RI 247 (568)
Q Consensus 176 ~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~ 247 (568)
|-.+++++|++.|+|+.++|++.+++.+.+||+..|.++++...++++.+++.+++...... +..+.. ..
T Consensus 153 --rD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 230 (498)
T COG3104 153 --RDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVL 230 (498)
T ss_pred --cCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhH
Confidence 99999999999999999999999999999999999999999999999998888877654432 222211 11
Q ss_pred HHHHHHHHhhcccccCCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHH
Q 008355 248 MQVIVASFRKSNVVVPADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAI 327 (568)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (568)
.+.+...... + ++..-..+...... ...-.... +.+.. +..++ .+.. +++||+
T Consensus 231 ~~~~~~~~~~-----~-----~~~~l~~~~~~~~~-------~~~~i~~~-~~~~~-----~~~~~---~~~~-~er~r~ 283 (498)
T COG3104 231 GGLVVMILAA-----L-----LTLLLNQNTFSGVL-------LVISILIA-IIYFA-----EAFRS---PKVF-DERRRL 283 (498)
T ss_pred HHHHHHHHHH-----H-----HHHHHHHHHHHHHH-------HHHHHHHH-HHHHH-----HHhcc---CccH-HHHHHH
Confidence 1111111110 0 00000000000000 00000000 00000 00111 1122 678899
Q ss_pred HHHHHHHHhhhHHHhhhccccceeEeecc-cccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCC
Q 008355 328 IRLLPVWASGIVFATVYSQMSTMFVLQGN-TMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGF 406 (568)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~ 406 (568)
+..+++++..++||..++|+++.+..+.. ..+++.. |++++++++|++|++.+++++|+.++++.|+.++. +.+
T Consensus 284 ~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~-g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~----~~p 358 (498)
T COG3104 284 LAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIF-GFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGN----KQP 358 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccchHHHHHHHhhccccc-ceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCC----CCC
Confidence 99999999999999999999998777653 3444434 68899999999999999999999999888876654 237
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhH
Q 008355 407 TQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMR 486 (568)
Q Consensus 407 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~r 486 (568)
+...++.+|+++++.+++++........ ++.+..+.+|+++.+++.++||.+.+|...+.+++++|+++.
T Consensus 359 s~~~KFalGl~l~g~~fl~l~~~~~~~~----------~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~ 428 (498)
T COG3104 359 STPIKFALGLILAGLGFLILLLAGIWFG----------GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALK 428 (498)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHhhc----------CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHH
Confidence 8888999999999999998887643311 113457889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhceec
Q 008355 487 SLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFTYK 561 (568)
Q Consensus 487 g~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~ 561 (568)
+..+|.+.+.+..|+.+++.+.+.... +. +..+...+..+|+..+...++..+......|+.++.
T Consensus 429 s~~ma~wfLt~a~~~~l~g~va~~~~~-~~---------~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~~~~~r~ 493 (498)
T COG3104 429 SFIMAMWFLTVAAGQTLGGQVAGLTAV-TD---------PAYTAFIEGRVFGTIGVVAIVIGILLLLLSPKLNRM 493 (498)
T ss_pred HHHHHHHHHHHHHHHHhhceecccccc-cc---------hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhHHHHHh
Confidence 999999999999999888777763211 00 011223344578888888888877777777765544
No 3
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=100.00 E-value=1.2e-36 Score=325.22 Aligned_cols=466 Identities=17% Similarity=0.241 Sum_probs=331.9
Q ss_pred CCCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhh-ccCchHHHHHHH
Q 008355 25 TGNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADS-YMGRFWTIASFS 103 (568)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr-~~Grk~~~~~~~ 103 (568)
++++|.++.+++.++++++++|++..+++.|+++++|++..+++++.+.+.....+..+++|+++|| + ||||++.++.
T Consensus 10 ~~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~-G~r~~~~~g~ 88 (489)
T PRK10207 10 LQQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLL-GTKRTIVLGA 88 (489)
T ss_pred hcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhcc-chHHHHHHHH
Confidence 4689999999999999999999999999999999999999999999999999999999999999999 6 9999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhh
Q 008355 104 IIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFN 183 (568)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (568)
+++++++++++++.+ ....++++|+++++|.|...|+..++++|++|+++++ |.++++
T Consensus 89 ~~~~~g~~~~~~~~~------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~----~~~~~~ 146 (489)
T PRK10207 89 IVLAIGYFMTGMSLL------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPR----LDGAFT 146 (489)
T ss_pred HHHHHHHHHHHHhcc------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchh----hhcchh
Confidence 999999999987621 1233568899999999999999999999999887522 688999
Q ss_pred hHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeec--CCCCChhHHHHHHHHH-------H
Q 008355 184 WFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQ--KPGGSPLTRIMQVIVA-------S 254 (568)
Q Consensus 184 ~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-------~ 254 (568)
+++++.|+|..+||.+++++.+++|||+.|++.++..+++++.+...++..++. +|++++. |..+.+.. .
T Consensus 147 ~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d~~~~~l~~~~~~~~~ 225 (489)
T PRK10207 147 LFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPM-SFSKLLLVLLGSVVMI 225 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccch-hhhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999997766665555555555444332 2222222 11111100 0
Q ss_pred Hhhcc-cccCCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHH
Q 008355 255 FRKSN-VVVPADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPV 333 (568)
Q Consensus 255 ~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (568)
..... ............. . ............ ...+ ..+++|.+....+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~-------~-----------~~i~~~~f~~~~------------~~~~-~~~r~r~~~~~~l 274 (489)
T PRK10207 226 FVCAWLMHNVEVANLVLIV-------L-----------SIVVTIIFFREA------------FKLD-KTGRNKMFVAFVL 274 (489)
T ss_pred HHHHHHHhhhhHHHHHHHH-------H-----------HHHHHHHHHHHH------------hcCC-HHHHHHHHHHHHH
Confidence 00000 0000000000000 0 000000000000 0001 1234555555666
Q ss_pred HHhhhHHHhhhccccceeEeecc-cccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHH
Q 008355 334 WASGIVFATVYSQMSTMFVLQGN-TMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRM 412 (568)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~ 412 (568)
+....++|..+.|....+..+.. ..+.... |+.+++++++++|++.+++..|+.+++ .+|.++|+..+++..++
T Consensus 275 ~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~-G~~i~~~~~~~~n~~~iii~~pl~~~l----~~rl~~r~~~~~~~~k~ 349 (489)
T PRK10207 275 MLEAVVFYILYAQMPTSLNFFAINNVHHEIL-GFSINPVSFQALNPFWVVVASPILAGI----YTHLGSKGKDLSMPMKF 349 (489)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHhcccccc-ceEECHHHHHhHhHHHHHHHHHHHHHH----HHHHhhCCCCCCcHHHH
Confidence 67788889999988766544432 3444445 778889999999999999999998774 44444444347888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHH
Q 008355 413 GIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSAL 492 (568)
Q Consensus 413 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~ 492 (568)
.+|+++.+++++.+....... .+. ....+.+++++.+++.++||++.+|..++++.+.+|++++|.++|+
T Consensus 350 ~~G~~l~~~~~~~~~~~~~~~---------~~~-~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~ 419 (489)
T PRK10207 350 TLGMFLCSLGFLTAAAAGMWF---------ADA-QGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGM 419 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhh---------cCC-CCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHH
Confidence 999999999987654332110 000 1124678888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCC-ccchhHHHHHHHHHHHHHHHHHHHHHhhhceecccccCC
Q 008355 493 SLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNL-NRGHLDYFYWLLTILSVLNFLVYLWIAKWFTYKKATGRA 567 (568)
Q Consensus 493 ~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~~~~~~~ 567 (568)
+++..++|+.+|..+......... .. |.. ..+.+..+|..+++.+++..++++.+.|+.++...++++
T Consensus 420 ~~l~~~ig~~lg~~l~~~~~~~~~-----~~--~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 488 (489)
T PRK10207 420 WFLTQAAAFLLGGYVATFTAVPDN-----IT--DPLETLPVYTNVFGKIGLVTLGVAVVMALMVPWLNRMINTPES 488 (489)
T ss_pred HHHHHHHHHHHHHHHHHHhccccc-----cc--cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 999999999999888775421000 00 011 123456788888888888888888878877665444443
No 4
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=100.00 E-value=4.3e-36 Score=320.69 Aligned_cols=453 Identities=21% Similarity=0.280 Sum_probs=328.8
Q ss_pred CCCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHH--hCCChhhhhhhHHHHHHHHHhhhhhHHHHhhh-ccCchHHHHH
Q 008355 25 TGNWKACRFILGNECCERLAYYGMSTNLVNYLQKQ--LNQGNVTASNNVTNWSGTCYITPLIGAFLADS-YMGRFWTIAS 101 (568)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr-~~Grk~~~~~ 101 (568)
.+++|.++.+++.++++++++|++.++++.|++++ +|++..+++++.+.+.++..++++++|+++|| + |||+++.+
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~-G~~~~l~~ 84 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVW-GTKKTMVL 84 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhc-chHHHHHH
Confidence 45788899999999999999999999999999987 99999999999999999999999999999999 6 99999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhh
Q 008355 102 FSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSF 181 (568)
Q Consensus 102 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 181 (568)
+.++.+++.++++++ .+.+.++++|.+.|+|.|...|+..++++|++|+++++ +|+++
T Consensus 85 ~~~~~~~g~~~~~~~-------------------~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~---~r~~~ 142 (475)
T TIGR00924 85 GGIVLMLGHFMLAMS-------------------IYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMP---RRDGG 142 (475)
T ss_pred HHHHHHHHHHHHHhc-------------------ccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcc---cccce
Confidence 999999999888876 34667888999999999999999999999999876421 18889
Q ss_pred hhhHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhH----HHH-------HH
Q 008355 182 FNWFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLT----RIM-------QV 250 (568)
Q Consensus 182 ~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------~~ 250 (568)
+++++++.|+|..+||.+++++.+.+||++.|++.++..+++++.+...++..++.++++++.+ +.. ..
T Consensus 143 ~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (475)
T TIGR00924 143 FTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAA 222 (475)
T ss_pred ehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHcccccccCCCCCCCcchhhhhhHHHHHHHHHH
Confidence 9999999999999999999999999999999999887666666555555544433222221110 000 00
Q ss_pred HHHHHhhcccccCCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHH
Q 008355 251 IVASFRKSNVVVPADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRL 330 (568)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (568)
+....+............... .........+.... ..+|. . +..++++....
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~---~~~~~----~-~~~~~~~~~~~ 274 (475)
T TIGR00924 223 LALVFFCAWLMHHVVIANILL--------------------MTVTLAVIIFFFRL---AFKPR----L-DAVARNKMYAY 274 (475)
T ss_pred HHHHHHHHHHHhccHHHHHHH--------------------HHHHHHHHHHHHHH---HHhcc----C-CHHHHhHHHHH
Confidence 001111000000000000000 00000000000000 00000 0 11223444456
Q ss_pred HHHHHhhhHHHhhhccccceeEee-cccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCch
Q 008355 331 LPVWASGIVFATVYSQMSTMFVLQ-GNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQL 409 (568)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~ 409 (568)
+.++++..++|..+.|+.+.+..+ ...++.+.+ ++++|+++++++|++.+++++|+.++++.++.|| .++++..
T Consensus 275 l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~-~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~----~~~~~~~ 349 (475)
T TIGR00924 275 IVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEML-GMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRK----GKDPTTP 349 (475)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHhcccccc-ceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhC----CCCCCcH
Confidence 777888889999999988865433 334566666 7889999999999999999999988754444443 2225667
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHH
Q 008355 410 QRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLC 489 (568)
Q Consensus 410 ~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~ 489 (568)
.++.+|+++.+++++.+++.... .++..+.+++|+++.+++.++||.+..|..++++++.+|+++||++
T Consensus 350 ~k~~~G~~l~~~~~~~~~~~~~~-----------~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~ 418 (475)
T TIGR00924 350 LKFTLGMLFCGASFLTFAASIWF-----------ADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQM 418 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhh-----------cCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHH
Confidence 78899999999999887765311 0112346889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhcee
Q 008355 490 SALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFTY 560 (568)
Q Consensus 490 ~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~ 560 (568)
+|++.+...+|+.+++.+.....+.. + ...+|...++++++..++.+++.|+.+|
T Consensus 419 ~g~~~l~~~~g~~l~~~~~~~~~~~~------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~k 473 (475)
T TIGR00924 419 LGMWFLAQAMGSLLGGYLATFGAVPQ------G----------VTGVFGKIGLVTLLVGVVMALMVPWLNR 473 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc------c----------hhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999988887653211 1 2346777777777777777777776554
No 5
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=100.00 E-value=7.3e-36 Score=314.47 Aligned_cols=474 Identities=17% Similarity=0.252 Sum_probs=326.3
Q ss_pred CCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHH
Q 008355 26 GNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSII 105 (568)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~ 105 (568)
+|+|.++.+++.++.+++++|++..+++.|+++++|++..+++.+.+.+.....++++++|+++||++||||++.++.++
T Consensus 6 ~~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il 85 (493)
T PRK15462 6 SQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALL 85 (493)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHH
Confidence 37888999999999999999999999999999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
.+++.++++... .+...++++..+..+|.|...++.+++++|++|+++++ |.++++++
T Consensus 86 ~~lg~lll~~~~------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~----R~sgf~i~ 143 (493)
T PRK15462 86 MAIGHVVLGASE------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPR----RDGGFSLM 143 (493)
T ss_pred HHHHHHHHHHhh------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcc----ccceehHH
Confidence 999887665431 11233555566677888888899999999999986422 99999999
Q ss_pred HHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCC-CCChh--HHHHHHHHHHHhhccccc
Q 008355 186 YLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKP-GGSPL--TRIMQVIVASFRKSNVVV 262 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~ 262 (568)
|+..|+|+.++|.+.+++.+.+||++.|.+.++..+++++.++..++...+... ++++. ++...........-....
T Consensus 144 Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (493)
T PRK15462 144 YAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLVLLVAT 223 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCCchhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999887777776666555544332211 11111 110000000000000000
Q ss_pred CCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHh
Q 008355 263 PADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFAT 342 (568)
Q Consensus 263 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (568)
+.-...... ++........ .......-+.... .. . .+.++++|+...+.++....+||.
T Consensus 224 ~~~~~~~~~-~~~~~~~~~~--------~~~~~~~~~~~~~------~~-----~-~~~~er~r~~~~~~l~~~~~~Fw~ 282 (493)
T PRK15462 224 PALITVLFW-KEWSVYALIV--------ATIIGLGVLAKIY------RK-----A-ENQKQRKELGLIVTLTFFSMLFWA 282 (493)
T ss_pred HHHHHHHHH-HHHHHHHHHH--------HHHHHHHHHHHHH------Hh-----c-CCHHHHhhHHHHHHHHHHHHHHHH
Confidence 000000000 0000000000 0000000000000 00 0 112567888888999999999999
Q ss_pred hhccccceeEeec-ccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHH
Q 008355 343 VYSQMSTMFVLQG-NTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIF 421 (568)
Q Consensus 343 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~ 421 (568)
.++|.++.+.... .++++++. |+++|+++++++|++.+++++|+..+++.+..+| ++.++...|+.+|++++++
T Consensus 283 ~~~Q~~~sl~lfa~~~vd~~~~-g~~ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~----~~~~s~~~Kfa~g~~~~g~ 357 (493)
T PRK15462 283 FAQQGGSSISLYIDRFVNRDMF-GYTVPTAMFQSINAFAVMLCGVFLAWVVKESVAG----NRTVRIWGKFALGLGLMSA 357 (493)
T ss_pred HHHHhhHHHHHHHHHhccchhc-ceeeCHHHHHhHhHHHHHHHHHHHHHHHHHHhcC----CCCCCcHHHHHHHHHHHHH
Confidence 9999998665543 56777877 8999999999999999999999999865544332 2237888899999999999
Q ss_pred HHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHH-HHHH
Q 008355 422 SMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTT-VAVG 500 (568)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~-~~lg 500 (568)
+++++....... + +....+.+|++..+++.++||.+.+|...+.+.+++|++.||+.+|++.+. ..+|
T Consensus 358 ~f~~l~~~~~~~----------~-~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~~~~laP~~~~g~~mg~w~l~~~~~~ 426 (493)
T PRK15462 358 GFCILTLSARWS----------A-MYGHSSLPLMVLGLAVMGFAELFIDPVAMSQITRIEIPGVTGVLTGIYMLLSGAIA 426 (493)
T ss_pred HHHHHHHHHhhc----------C-CCCCcCHHHHHHHHHHHHHHHHHHChHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 998887654220 0 112367888999999999999999999999999999999999999999874 4688
Q ss_pred HHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHH--HHHHHHHhhhceecc
Q 008355 501 NYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLN--FLVYLWIAKWFTYKK 562 (568)
Q Consensus 501 ~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~--~v~~~~~~~~~~~~~ 562 (568)
+.+++.+......... +.+. -. .-+...+..+|...+...++. ++.+.+++...|.|+
T Consensus 427 ~~~~g~~~~~~~~~~~-~~~~-~~--~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (493)
T PRK15462 427 NYLAGVIADQTSQASF-DASG-AI--NYSINAYIEVFDQITWGALACVGVVLMIWLYQALKFRN 486 (493)
T ss_pred HHHHHHHHHHhccccC-Cccc-cc--cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8777777665422100 0000 00 001124556677777666554 444445555444443
No 6
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=100.00 E-value=3.1e-34 Score=308.08 Aligned_cols=457 Identities=18% Similarity=0.271 Sum_probs=322.7
Q ss_pred CCCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHH
Q 008355 25 TGNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSI 104 (568)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~ 104 (568)
.+++|.++.+++.++++++++|++..+++.|+++++|++..+++++.+.+........+++|+++||++|||+++..+.+
T Consensus 17 ~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~ 96 (500)
T PRK09584 17 FKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAI 96 (500)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHH
Confidence 35678899999999999999999999999999999999999999888888877777788999999993399999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhh
Q 008355 105 IYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNW 184 (568)
Q Consensus 105 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (568)
+.+++..+++++. .+...++++|+++|+|.|...|+..++++|++|+++++ |.+++++
T Consensus 97 ~~~ig~~l~~~~~------------------~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~----~~~~~~~ 154 (500)
T PRK09584 97 VLAIGYALVAWSG------------------HDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPR----LDGAFTM 154 (500)
T ss_pred HHHHHHHHHHHhc------------------ccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchh----hhhcchH
Confidence 9999988887751 13455778899999999999999999999999876422 6678999
Q ss_pred HHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeec--CCCCChhH--HHH----HHHHHHHh
Q 008355 185 FYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQ--KPGGSPLT--RIM----QVIVASFR 256 (568)
Q Consensus 185 ~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~----~~~~~~~~ 256 (568)
++++.++|+.+||.+++++.+++||++.|++.++..+++++.+...++..+++ ++++++.+ ... .+......
T Consensus 155 ~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (500)
T PRK09584 155 YYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAI 234 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998876666655544443333322 22222221 111 11111111
Q ss_pred hc-ccccCCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHH
Q 008355 257 KS-NVVVPADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWA 335 (568)
Q Consensus 257 ~~-~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (568)
.. ....++....... ......... . +++..+.+..++++.+..+.+++
T Consensus 235 ~~~~~~~~~~~~~~~~---------------------~~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~ 283 (500)
T PRK09584 235 ATWLLHNQEIARMALG---------------------VVALGIVVI-F---------GKEAFAMKGAARRKMIVAFILML 283 (500)
T ss_pred HHHHHhcchHHHHHHH---------------------HHHHHHHHH-H---------HHHHhhcCHHHHHHHHHHHHHHH
Confidence 00 0000000000000 000000000 0 00000001134555555666778
Q ss_pred hhhHHHhhhccccceeEeecc-cccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHH
Q 008355 336 SGIVFATVYSQMSTMFVLQGN-TMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGI 414 (568)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~ 414 (568)
...++|..+.|++..+..+.. ..+.+.. ++.+++++++++|++.+++++|+.+++ .+|+.+| .++.+++.+
T Consensus 284 ~~i~f~~~~~q~~~~l~~~~~~~~~~~~~-g~~i~~~~~~s~n~i~iil~~p~~~~~----~~~l~~r---~~~~~~~~~ 355 (500)
T PRK09584 284 EAIIFFVLYSQMPTSLNFFAIRNVEHSIL-GIAVEPEQYQALNPFWIMIGSPILAAI----YNKMGDR---LPMPHKFAI 355 (500)
T ss_pred HHHHHHHHHHHhccHHHHHHHHhcccccc-ceEECHHHHHHHhHHHHHHHHHHHHHH----HHHhCcC---CCcHHHHHH
Confidence 888999999999988776542 3444555 788899999999999999999998884 3444444 567889999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHH
Q 008355 415 GLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSL 494 (568)
Q Consensus 415 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~ 494 (568)
|+++++++++.+...... .++....+.+++++.+++.++||++..|...+++.+.+|+++||+++|++.
T Consensus 356 G~~l~~l~f~~l~~~~~~-----------~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~ 424 (500)
T PRK09584 356 GMVLCSGAFLVLPLGAKF-----------ANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWF 424 (500)
T ss_pred HHHHHHHHHHHHHHHHHh-----------cCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 999999999987765421 011223567789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCC-ccchhHHHHHHHHHHHHHHHHHHHHHhhhcee
Q 008355 495 TTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNL-NRGHLDYFYWLLTILSVLNFLVYLWIAKWFTY 560 (568)
Q Consensus 495 ~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~ 560 (568)
+...+|+.+++.+........ -..|.. ..+++..+|..+++.+++..++++...|+.++
T Consensus 425 l~~a~g~~~~g~~~~~~~~~~-------~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~~~~~k 484 (500)
T PRK09584 425 LTTAGAALIAGYVANLMAVPD-------NVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTAPKLNR 484 (500)
T ss_pred HHHHHHHHHHHHHHHHhcccc-------ccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888877777765332100 000111 12336678888888887777666666665543
No 7
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.96 E-value=3.8e-26 Score=248.82 Aligned_cols=334 Identities=31% Similarity=0.620 Sum_probs=267.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCC
Q 008355 43 LAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGL 122 (568)
Q Consensus 43 ~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~ 122 (568)
++||++...+..|+.+.+|++...+..+...+.....+.++++|+++|+++||++++.++.++..+|..++++.+. |..
T Consensus 1 FsyYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~-~~~ 79 (654)
T TIGR00926 1 FSYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI-PSS 79 (654)
T ss_pred CceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC-ccc
Confidence 4689999999999999999999999999999999999999999999999999999999999999999988887532 210
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhh
Q 008355 123 KPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVW 202 (568)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~ 202 (568)
.........+++..+.++|.|++.|+..++.+|+++++++ .+|.+++.++++++|+|+.+++++.++
T Consensus 80 ----------~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~---~~~~s~F~~fY~~iNiGSlis~~i~~~ 146 (654)
T TIGR00926 80 ----------GHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQL---SLRSRFFSFFYFAINAGSLISTIITPI 146 (654)
T ss_pred ----------ccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccch---hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0012234577888999999999999999999999986542 238899999999999999999999998
Q ss_pred eecc-------ccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhhhhhh
Q 008355 203 IQMN-------VGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYETADE 275 (568)
Q Consensus 203 i~~~-------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (568)
+.+. .+|...|.++++..+++++++...++++++.+|.+++..+..+++....+++....++.
T Consensus 147 l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~~~~~~~~~~---------- 216 (654)
T TIGR00926 147 LRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALRKRFSTRSEH---------- 216 (654)
T ss_pred HHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHHHhhccCCcc----------
Confidence 8744 36999999999999999888887777777777777777777777766665432111100
Q ss_pred hhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhccccceeEeec
Q 008355 276 ECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMSTMFVLQG 355 (568)
Q Consensus 276 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (568)
....|.|.+... ..++.+++.|++++.+.+++...++|..+.|..+.+..|.
T Consensus 217 -------------~~~~~ld~a~~~---------------~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa 268 (654)
T TIGR00926 217 -------------WPLHWLDYAKDK---------------HDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQA 268 (654)
T ss_pred -------------cchhHHHHhccc---------------cccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHH
Confidence 001233222110 1123467789999999999999999999999999888887
Q ss_pred ccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHH
Q 008355 356 NTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVV 432 (568)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~ 432 (568)
..++.+++ ++.+++++++.++.+.++++.|+.++.+.|..+|.+.. +++..++++|+++++++++++...+..
T Consensus 269 ~~m~~~l~-g~~ip~~~lq~~n~L~IIil~Pi~~~~lyp~l~~~~~~---ls~l~k~~iG~~la~la~~va~~ve~~ 341 (654)
T TIGR00926 269 TRMDGDVG-GFEIQPDQMQVVNPLLILIFVPIFDYIVYPAIAKCGTR---FTSLRKMAVGGLLAALSFFVAALVQLK 341 (654)
T ss_pred HHhcCccC-CEecCHHHHHHHHHHHHHHhHHHHHHhHHHHHHhcCCC---CChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777776 78899999999999999999999998777777665433 788999999999999999988887654
No 8
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.95 E-value=1.1e-25 Score=248.02 Aligned_cols=155 Identities=15% Similarity=0.092 Sum_probs=132.8
Q ss_pred HHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCC
Q 008355 49 STNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDK 128 (568)
Q Consensus 49 ~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 128 (568)
...+.+++.+++|++..+.+++.+++.++.+++.+++|+++||+ |||++++++.++.+++.++++++
T Consensus 186 is~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~-GRR~~lii~lil~~i~~ll~afa------------ 252 (742)
T TIGR01299 186 VGFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKL-GRKQCLLICLSVNGFFAFFSSFV------------ 252 (742)
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHH------------
Confidence 44555677888999999999999999999999999999999999 99999999999999998888877
Q ss_pred CCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheecc--
Q 008355 129 DACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMN-- 206 (568)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~-- 206 (568)
.+.+.++++|++.|+|.|+..|+..++++|.+|++. |++.+++..+...+|.++++.++..+...
T Consensus 253 -------~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~------Rg~~~g~~~~~~~iG~ila~~la~~il~~~G 319 (742)
T TIGR01299 253 -------QGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK------RGEHLSWLCMFWMIGGIYAAAMAWAIIPHYG 319 (742)
T ss_pred -------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 458889999999999999999999999999999988 99999999999999999998876554332
Q ss_pred -----------ccchhhhhHHHHHHHHHHHHHHh
Q 008355 207 -----------VGWGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 207 -----------~g~~~~f~~~~~~~~~~~~~~~~ 229 (568)
.+||+.|++.++..++++++.++
T Consensus 320 ~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~ 353 (742)
T TIGR01299 320 WSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTF 353 (742)
T ss_pred chhccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 36899888877666555544443
No 9
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.95 E-value=2.5e-25 Score=233.37 Aligned_cols=380 Identities=10% Similarity=0.026 Sum_probs=250.4
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
+|++..+....++..++.....+.+|.|+++++|.|..+.|++.+++.+...+++++.|+++||+ |||+++..+.++++
T Consensus 14 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~ 92 (399)
T PRK05122 14 TLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTL-GPKKAVVFGLCGCA 92 (399)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhcc-CCcchHHHHHHHHH
Confidence 45678888889999999888889999999999999999999999999999999999999999999 99999999998888
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++.+.+.++...... ...+...+++.|+++|++.+...+....++.|.+|+++ |+++++++..
T Consensus 93 ~~~~~~~~~~~~~~~-----------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~ 155 (399)
T PRK05122 93 LSGLLYLLAGLLAAW-----------PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALH------TGRVISWNGI 155 (399)
T ss_pred HHHHHHHHhhhhhcc-----------chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhh------hccchhhhhh
Confidence 776665544211100 00246678999999999999999999999999999888 9999999999
Q ss_pred HHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcch
Q 008355 188 SINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKS 267 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (568)
..++|..++|.+++.+.+.+||++.+++.++..++..+.. ++. ++.++++++..
T Consensus 156 ~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~---------------------- 209 (399)
T PRK05122 156 ATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA---RPR-PAVPPVKGERL---------------------- 209 (399)
T ss_pred hhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH---hcC-CCCCCCCccch----------------------
Confidence 9999999999999999999999998877655443332221 111 00000000000
Q ss_pred hhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhccc
Q 008355 268 LLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQM 347 (568)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (568)
+++ +..++.+... .........+.......
T Consensus 210 --------------------------------------------~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 239 (399)
T PRK05122 210 --------------------------------------------PFR----RVLGRVWPYG--MGLALASIGFGTIATFI 239 (399)
T ss_pred --------------------------------------------hHH----HHHHHHHHHH--HHHHHHHHHHHHHHHHH
Confidence 000 0000000000 00011111111111111
Q ss_pred cceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 008355 348 STMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAG 427 (568)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~ 427 (568)
+.++..+ +.. . .........+..++..++.++ +.+| .++++.+..+.++.+++.+...
T Consensus 240 ~~~~~~~--~~~-~--------~~~~~~~~~~~~~~~~~~~g~----l~~r-------~~~~~~~~~~~~~~~~~~~~~~ 297 (399)
T PRK05122 240 TLYYAAR--GWD-G--------AALALTLFGVAFVGARLLFGN----LINR-------LGGLRVAIVSLLVEILGLLLLW 297 (399)
T ss_pred HHHHHHc--ccc-c--------chHHHHHHHHHHHHHHHHHHH----HHHH-------hccHHHHHHHHHHHHHHHHHHH
Confidence 1111111 000 0 011111122222333333333 4444 3333456667677777665554
Q ss_pred HHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 008355 428 ILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLL 507 (568)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l 507 (568)
..+ +.+.++...++.|++.+...|.......+..|++.||++.|+++....+|..+++.+
T Consensus 298 ~~~--------------------~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~ 357 (399)
T PRK05122 298 LAP--------------------SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPL 357 (399)
T ss_pred Hhc--------------------cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 444555667888888888888888888899999999999999999999999999999
Q ss_pred HHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhce
Q 008355 508 VTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFT 559 (568)
Q Consensus 508 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~ 559 (568)
.+.+.+.. +++..|++.+++++++.+..++..++++
T Consensus 358 ~g~l~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 358 AGLVASWF----------------GYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHHHHHc----------------CHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 88876532 2355677778888887766665544433
No 10
>PRK03545 putative arabinose transporter; Provisional
Probab=99.95 E-value=1.4e-25 Score=234.54 Aligned_cols=381 Identities=11% Similarity=0.044 Sum_probs=244.6
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
|..++.+.+..++.....+...+.+| .+.+++|.|..+.|+..+.+.++..++.++.|+++||+ |||+++..+.++.+
T Consensus 8 ~~~~~~l~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~ 85 (390)
T PRK03545 8 WLRVVTLALAAFIFNTTEFVPVGLLS-DIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNV-ERRKLLIGLFVLFI 85 (390)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHcchH-HHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-ChHHHHHHHHHHHH
Confidence 44455556655655455444333344 56788999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++++.++++ ++.+.+++.|+++|++.+...+...+++.|++|+++ |+++++++..
T Consensus 86 ~~~~~~~~~-------------------~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~g~~~~ 140 (390)
T PRK03545 86 ASHVLSALA-------------------WNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGK------KAQALSLLAT 140 (390)
T ss_pred HHHHHHHHh-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhh------hhhHHHHHHH
Confidence 999988887 568889999999999999989999999999999988 9999999999
Q ss_pred HHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcch
Q 008355 188 SINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKS 267 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (568)
+.++|..++|.+++.+.+..|||+.|++.++..++..+..+...++.++ +++++.++ ...
T Consensus 141 ~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~----~~~-------------- 200 (390)
T PRK03545 141 GTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS--EHSGSLKS----LPL-------------- 200 (390)
T ss_pred HHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC--CCcchHHH----HHH--------------
Confidence 9999999999999999888999999999887665554443332221110 00000000 000
Q ss_pred hhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHH-HHHHHhhhHHHhhhcc
Q 008355 268 LLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRL-LPVWASGIVFATVYSQ 346 (568)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 346 (568)
..++ +..... ..........+.....
T Consensus 201 ----------------------------------------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 227 (390)
T PRK03545 201 ----------------------------------------------------LFRR-PALVSLYLLTVVVVTAHFTAYSY 227 (390)
T ss_pred ----------------------------------------------------HHhC-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 111111 1111111111111111
Q ss_pred ccceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHH
Q 008355 347 MSTMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAA 426 (568)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 426 (568)
...++... .+.+.. ..+.+.....+..++...+.++ +.+|. ++ +.+..+..+..++....
T Consensus 228 ~~~~l~~~-~g~s~~-------~~~~~~~~~~~~~~~g~~~~g~----l~dr~-------~~-~~~~~~~~~~~~~~~~l 287 (390)
T PRK03545 228 IEPFVQQV-AGLSEN-------FATLLLLLFGGAGIIGSVLFSR----LGNRH-------PS-GFLLIAIALLLVCLLLL 287 (390)
T ss_pred HHHHHHHh-cCCCcc-------HHHHHHHHHHHHHHHHHHHHHH----Hhhcc-------ch-hHHHHHHHHHHHHHHHH
Confidence 11111110 111110 0111222222233333333332 44442 22 23445555554544333
Q ss_pred HHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHH
Q 008355 427 GILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTL 506 (568)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~ 506 (568)
.... .+.+.++...++.|++.....+.....+.+..| +.|+.++|+++....+|..+|+.
T Consensus 288 ~~~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~ 347 (390)
T PRK03545 288 LPAA-------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGAL 347 (390)
T ss_pred HHHh-------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHH
Confidence 2211 134455556677788877777777888888877 57899999999999999999999
Q ss_pred HHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhceeccccc
Q 008355 507 LVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFTYKKATG 565 (568)
Q Consensus 507 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~~~~~ 565 (568)
+.|.+.+.. +++..|+..+++.+++.+.++...+ .+..+.||
T Consensus 348 ~~G~~~~~~----------------g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 389 (390)
T PRK03545 348 LGNQVSLHL----------------GLSSIGYVGAALALAALVWSILIFR-RFPVTLEE 389 (390)
T ss_pred HHHHHHhcc----------------ChhHHHHHHHHHHHHHHHHHHHHcc-ccchhhcc
Confidence 999887543 2345678888888888877766554 33444444
No 11
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.94 E-value=4.4e-25 Score=231.46 Aligned_cols=373 Identities=13% Similarity=0.151 Sum_probs=246.3
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHH
Q 008355 32 RFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMT 111 (568)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~ 111 (568)
++++...++..++++.+.+.++.|+++++|+|..++|++.+...+...+..+++|+++||+ |||+++..+.++.+++.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~-g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRF-GAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 7778899999999999999999999999999999999999999999999999999999999 999999999999999988
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHH
Q 008355 112 LLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINI 191 (568)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 191 (568)
.+..+ ++.+.+++.|+++|++.+...|...+++.|.+|+++ |++++++.+...++
T Consensus 92 ~~~~~-------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~a~~~~~~~~~~ 146 (400)
T PRK11646 92 TMAIA-------------------HEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQ------RGRFFSLLMMQDSA 146 (400)
T ss_pred HHHHh-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHH
Confidence 88776 457888999999999999888999999999999888 99999999999999
Q ss_pred hHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhh
Q 008355 192 GALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYE 271 (568)
Q Consensus 192 g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (568)
|..+||.+++++. .+||++.|++.++..++..+......++.+. ++..++..
T Consensus 147 g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~-------------------------- 198 (400)
T PRK11646 147 GAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL-STVRTPVR-------------------------- 198 (400)
T ss_pred HHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc-cccchhhH--------------------------
Confidence 9999999999988 6899999998876655544333332222110 00000000
Q ss_pred hhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhcccccee
Q 008355 272 TADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMSTMF 351 (568)
Q Consensus 272 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (568)
+ +++ ...++ ++........ ..++....+....+
T Consensus 199 ----~-----------------------------------~~~----~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~ 231 (400)
T PRK11646 199 ----E-----------------------------------GMT----RVLRD-KRFVTYVLTL---TGYYMLAVQVMLML 231 (400)
T ss_pred ----H-----------------------------------HHH----HHHcC-chHHHHHHHH---HHHHHHHHHHHHhh
Confidence 0 000 00000 1111111111 11111111111111
Q ss_pred EeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 008355 352 VLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEV 431 (568)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 431 (568)
+.. .... + +.....+.+........+...... .+..+| | .+..+.+..+.++.+++.+.+...+
T Consensus 232 p~~---~~~~-~-~~~~~~g~l~~~~~~~~~~~~~~~----~~~~~~---r---~~~~~~~~~~~~~~~~~~~~l~~~~- 295 (400)
T PRK11646 232 PIM---VNDI-A-GSPSAVKWMYAIEACLSLTLLYPI----ARWSEK---R---FRLEHRLMAGLLIMSLSMFPIGMVS- 295 (400)
T ss_pred hhh---HHhh-c-CCchHHHHHHHHHHHHHHHHHHHH----HHHHHH---h---cchhHHHHHHHHHHHHHHHHHHHhh-
Confidence 110 0000 1 000011112222222222111111 122222 1 2333456677777777766554332
Q ss_pred HhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008355 432 VRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIV 511 (568)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i 511 (568)
+.++++....+.+++.+...|...+++.+.+|++.||+++|++++...+|..+|+.+.|.+
T Consensus 296 -------------------~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l 356 (400)
T PRK11646 296 -------------------NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWL 356 (400)
T ss_pred -------------------hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHH
Confidence 3344444556778888888899999999999999999999999999999999999999999
Q ss_pred hhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHH
Q 008355 512 TKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYL 552 (568)
Q Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~ 552 (568)
.+..+..+ .....|+..+++++++.+...
T Consensus 357 ~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 357 FDLGKALN------------QPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred HHHHhhcC------------CcchHHHHHHHHHHHHHHHHH
Confidence 87643111 112345555666666655444
No 12
>PRK12382 putative transporter; Provisional
Probab=99.94 E-value=9.9e-25 Score=228.34 Aligned_cols=375 Identities=12% Similarity=0.047 Sum_probs=243.3
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.+.++.+.+..++...+.....+.+|.|+.+++|.|..+.|++.+++.+...+++++.|+++||+ ||||.+..+.+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~-g~r~~l~~~~~~~~ 92 (392)
T PRK12382 14 NFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQY-GAKRSALQGMLACG 92 (392)
T ss_pred cccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhh-cchHHHHHHHHHHH
Confidence 45667777788888888888888999999999999999999999999999999999999999999 99999999888777
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++.+........+. ....+.+.++++|+++|++.+...+...+++.|.+|+++ |++++++++.
T Consensus 93 ~~~~~~~~~~~~~~-----------~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~a~~~~~~ 155 (392)
T PRK12382 93 LAGLAYLLAAILPV-----------SAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKH------SGKVMSWNGM 155 (392)
T ss_pred HHHHHHHhhhcccc-----------chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc------cchhhhHHHH
Confidence 66543332211110 011467889999999999999988888899999999888 9999999999
Q ss_pred HHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcch
Q 008355 188 SINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKS 267 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (568)
+.++|..++|.+++++.+.+||++.+.+..+..++... ..++ .++.+++++...
T Consensus 156 ~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~---------------------- 209 (392)
T PRK12382 156 AMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWA---FNGT-VRKVPAHAGERP---------------------- 209 (392)
T ss_pred HHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH---HHHh-ccCCCCCcccCc----------------------
Confidence 99999999999999998889999876655443322221 1111 110000000000
Q ss_pred hhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhccc
Q 008355 268 LLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQM 347 (568)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (568)
+++ +..+..++.. .........+.......
T Consensus 210 --------------------------------------------~~~----~~~~~~~~~~--~~~~l~~~~~~~~~~~~ 239 (392)
T PRK12382 210 --------------------------------------------SLW----SVVGLIWKPG--LGLALQGVGFAVIGTFV 239 (392)
T ss_pred --------------------------------------------hHH----HHHHHHHHhH--HHHHHHHHHHhHHHHHH
Confidence 000 0000000000 00000011111111111
Q ss_pred cceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 008355 348 STMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAG 427 (568)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~ 427 (568)
+.++ .+ .... ..........+..++..++.++ +.+|. ++++.+..+..+.+++++...
T Consensus 240 ~~~~-~~-----~~~~-----~~~~~~~~~~~~~~~~~~~~g~----l~~r~-------g~~~~~~~~~~~~~~~~~~~~ 297 (392)
T PRK12382 240 SLYF-AS-----KGWA-----MAGFTLTAFGGAFVLMRVLFGW----MPDRF-------GGVKVAIVSLLVETVGLLLLW 297 (392)
T ss_pred HHHH-Hh-----cCCc-----hhHHHHHHHHHHHHHHHHHHHH----HHHhc-------CCCeehHHHHHHHHHHHHHHH
Confidence 1111 10 0000 0111111122223333344333 44553 333456667777766665544
Q ss_pred HHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 008355 428 ILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLL 507 (568)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l 507 (568)
..+ +.+......++.+++.+...|.......+..|++.||++.|++++...+|..+|+.+
T Consensus 298 ~~~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~ 357 (392)
T PRK12382 298 LAP--------------------TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPL 357 (392)
T ss_pred Hcc--------------------cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322 344455566778888888888888899999999999999999999999999999999
Q ss_pred HHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHH
Q 008355 508 VTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWI 554 (568)
Q Consensus 508 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~ 554 (568)
.+.+.+.. || +..|.+.+++.+++.+..++.
T Consensus 358 ~g~l~~~~------g~----------~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 358 AGMLATSF------GY----------PSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHh------Cc----------hHHHHHHHHHHHHHHHHHHhh
Confidence 99887644 23 456777787777777665544
No 13
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.94 E-value=1.4e-24 Score=229.20 Aligned_cols=392 Identities=14% Similarity=0.069 Sum_probs=246.5
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLG 109 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 109 (568)
....++...++..++.......+|.+.+ +++.+..+.|++.+.+.+...++.++.|+++||+ |||+.+..+.++.+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~-g~~~~l~~~~~~~~~~ 95 (417)
T PRK10489 18 AFRAVFIARFISIFGLGLLGVAVPVQIQ-MMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRY-DRKKLILLARGTCGLG 95 (417)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhc-CCceEEEehHHHHHHH
Confidence 3455666677777777666667776654 5778999999999999999999999999999999 9999999888877777
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHH
Q 008355 110 MTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSI 189 (568)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (568)
....+....... .+.+.+++.|++.|++.+...++..+++.|.+|+++ |+++.++.+...
T Consensus 96 ~~~~~~~~~~~~--------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 155 (417)
T PRK10489 96 FIGLALNAFLPE--------------PSLLAIYLLGLWDGFFGSLGVTALLAATPALVGREN------LMQAGAITMLTV 155 (417)
T ss_pred HHHHHHHHHcCC--------------CcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHH------HHHHHHHHHHHH
Confidence 666543211111 356778889999999998888888999999999887 999999999999
Q ss_pred HHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhh
Q 008355 190 NIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLL 269 (568)
Q Consensus 190 ~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (568)
++|..+||.+++.+.+..+|++.|++.++..+++.+.....++..+++.+++++..+..
T Consensus 156 ~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------------------- 214 (417)
T PRK10489 156 RLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPALPPPPQPREHPLRSLL--------------------- 214 (417)
T ss_pred hHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCcccccchHHHH---------------------
Confidence 99999999999999888899999988776665554443332211000000000000000
Q ss_pred hhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhccccc
Q 008355 270 YETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMST 349 (568)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (568)
+ +++ .....+.+........+...........+.
T Consensus 215 -------------------------~----------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 248 (417)
T PRK10489 215 -------------------------A----------------GFR-----FLLASPVVGGIALLGGLLTMASAVRVLYPA 248 (417)
T ss_pred -------------------------H----------------HHH-----HHHcChHHHHHHHHHHHHHHHHhHHHhhHH
Confidence 0 000 000001111111111111111111111111
Q ss_pred eeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 008355 350 MFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGIL 429 (568)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~ 429 (568)
+. .+..+.+. ...+.+.....++.++...+.++ +.+| .++.+.+..+.++.+++++.+...
T Consensus 249 ~~-~~~~g~~~-------~~~g~~~~~~~~g~~ig~~~~~~----l~~~-------~~~~~~l~~~~~~~~~~~~~~~~~ 309 (417)
T PRK10489 249 LA-DEVWQMGA-------AQIGLLYAAVPLGAALGALTSGW----LAHS-------ARPGLLMLLSTLGSFLAVGLFGLM 309 (417)
T ss_pred HH-HhccCCCh-------hHhHHHHHHHHHHHHHHHHHHHH----hhhc-------cCcchHHHHHHHHHHHHHHHHHcc
Confidence 11 11011110 01122222223333333333332 3332 222334566666666665554422
Q ss_pred HHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008355 430 EVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVT 509 (568)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~ 509 (568)
. +.+......++.+++.+...+..++++.+..|++.||++.|+++....+|..+|+.+.|
T Consensus 310 ~--------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G 369 (417)
T PRK10489 310 P--------------------MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLG 369 (417)
T ss_pred c--------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHH
Confidence 1 33445556677788888777888899999999999999999999999999999999999
Q ss_pred HhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhceeccccc
Q 008355 510 IVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFTYKKATG 565 (568)
Q Consensus 510 ~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~~~~~ 565 (568)
.+.+..+ ....++..+++.++..++.+...+++|+++.||
T Consensus 370 ~l~~~~g----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (417)
T PRK10489 370 GLGAMMT----------------PVASASASGFGLLIIGVLLLLVLGELRRFRQTP 409 (417)
T ss_pred HHHHHhc----------------hhhHHHHHHHHHHHHHHHHHHhccccccccccc
Confidence 8876432 123566666666666666666677777766554
No 14
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.94 E-value=5.7e-25 Score=237.59 Aligned_cols=448 Identities=11% Similarity=0.029 Sum_probs=246.8
Q ss_pred CcceehhHhhHHHHHHHHHHHHHHHHHHHHHHH-----hCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHH
Q 008355 27 NWKACRFILGNECCERLAYYGMSTNLVNYLQKQ-----LNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIAS 101 (568)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-----lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~ 101 (568)
+++.+.++.+..+.+......+....+. +.++ .+.+..+.+++.+.+.++..++.++.|+++||+ |||+++.+
T Consensus 14 ~~~~~~~~~~~~~~~g~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~-Grr~~~~~ 91 (502)
T TIGR00887 14 HFRAIVIAGVGFFTDSYDLFCISLVTKM-LGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKL-GRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccHHHHHH
Confidence 3455555666666666655444444443 3332 234566778999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhh
Q 008355 102 FSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSF 181 (568)
Q Consensus 102 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 181 (568)
+.++..++.++++++.+.. ...+...++++|+++|++.|...+..+.+++|.+|+++ |+++
T Consensus 92 ~~~~~~v~~~~~~~~~~~~-------------~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~------Rg~~ 152 (502)
T TIGR00887 92 ELIIMIIATVASGLSPGSS-------------PKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKW------RGAM 152 (502)
T ss_pred HHHHHHHHHHHHHHccCcc-------------cchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhh------HHHH
Confidence 9999999888877752100 00236789999999999999999999999999999999 9999
Q ss_pred hhhHHHHHHHhHHHhhhhhhheec-----------------------cccchhhhhHHHHHHHHHHHHHHhcCceeeecC
Q 008355 182 FNWFYLSINIGALVASSVLVWIQM-----------------------NVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQK 238 (568)
Q Consensus 182 ~~~~~~~~~ig~~~~p~~~~~i~~-----------------------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (568)
.++.+....+|..+++.++..+.. .++||+.|.+.++..++.++..+.
T Consensus 153 ~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~--------- 223 (502)
T TIGR00887 153 MAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLT--------- 223 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHh---------
Confidence 999999999999999887764421 247999998777655544443322
Q ss_pred CCCChhHHHHHHHHHHHhhcccccCCcchhhhhhhhhhh-hhccCccccCCccc-hhhhhhhhhccccccCCCCCCCccc
Q 008355 239 PGGSPLTRIMQVIVASFRKSNVVVPADKSLLYETADEEC-NIQGSRKLESTSKF-KFFDKAAVETQTDRVKGSADPWRLC 316 (568)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (568)
+||+|+++.+++++++ ..+...+..+.+.. ...+..+++.. . +....+|++.
T Consensus 224 -----------------------lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~l 277 (502)
T TIGR00887 224 -----------------------IPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTA--V-EVPKASWSDF 277 (502)
T ss_pred -----------------------CCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhcc--c-cchhhhHHHH
Confidence 4566666655544322 22111111110000 00000000000 0 0001123322
Q ss_pred chhh--HHHHHHHHHHHHHHHhhh-HHHhhhccccceeEeecccccCCCCCCcccCchh------hccccchhhhhhhhh
Q 008355 317 TVTQ--VEELKAIIRLLPVWASGI-VFATVYSQMSTMFVLQGNTMDQHMGPNFKIPSAS------LSLFDTLSVIFWAPI 387 (568)
Q Consensus 317 ~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~i~~~~l 387 (568)
.+.. .+..++++......+... .++....+.++.+ .. .++..... +....... ......+..++...+
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~-~~-~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~g~~~ 354 (502)
T TIGR00887 278 FTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVIL-SA-IGYSPPAA-TNNAYEELYKTAVGNLIIALAGTVPGYWV 354 (502)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHH-HH-HcCCCCcc-chhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1110 011111111111111111 1111111111111 11 11111000 00000000 000011111112222
Q ss_pred hhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHH
Q 008355 388 YDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEV 467 (568)
Q Consensus 388 ~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~ 467 (568)
..+ +.+|.++| +.+.++.++++++..+.+..... .+.. ..+....+...++..
T Consensus 355 ~~~----l~dr~gRR-------~~l~~~~~~~~~~~~~l~~~~~~---------------~~~~-~~~~~~~~~~~~~~~ 407 (502)
T TIGR00887 355 TVF----LVDIIGRK-------PIQLMGFFILTVLFFVLGFAYNH---------------LSTH-GFLAIYVLAQFFANF 407 (502)
T ss_pred HHH----Hhhhhcch-------hHHHHHHHHHHHHHHHHHHHHHh---------------cchh-HHHHHHHHHHHHHhc
Confidence 223 45554433 34566666666666555433211 0001 111111111222223
Q ss_pred HHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHH
Q 008355 468 FTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLN 547 (568)
Q Consensus 468 ~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~ 547 (568)
...+..+.+..|.+|++.|+++.|+.+..+.+++++++.+.+.+.+....+. |+. ...++...|++++++++++
T Consensus 408 ~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~----~~~~~~~~~~i~~~~~~~~ 481 (502)
T TIGR00887 408 GPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTK--GYP----TGIWMGHVLEIFALFMFLG 481 (502)
T ss_pred CCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccc--ccc----ccccchHHHHHHHHHHHHH
Confidence 3456678889999999999999999999999999999999998765321000 000 0012235678888888887
Q ss_pred HHHHHHHhhhceecccccCC
Q 008355 548 FLVYLWIAKWFTYKKATGRA 567 (568)
Q Consensus 548 ~v~~~~~~~~~~~~~~~~~~ 567 (568)
.+.+ ++.||+++++.||.+
T Consensus 482 ~i~~-~~lpEt~~~~leei~ 500 (502)
T TIGR00887 482 ILFT-LLIPETKGKSLEELS 500 (502)
T ss_pred HHHh-eEeccCCCCCHHhhh
Confidence 6654 566999998877643
No 15
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.94 E-value=1.6e-24 Score=227.84 Aligned_cols=174 Identities=15% Similarity=0.117 Sum_probs=149.1
Q ss_pred CCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHH
Q 008355 26 GNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSII 105 (568)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~ 105 (568)
.+|..++..++..+++....+..-...| .+.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 89 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAAP-RMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRI-GRKRILIVSVAL 89 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHH
Confidence 4455667777777777777766655555 45678999999999999999999999999999999999 999999999988
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
..++.+++.++ .+.+.+++.|++.|++.+...+...+++.|++|+++ |+++++++
T Consensus 90 ~~~~~~~~~~~-------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~ 144 (406)
T PRK11551 90 FGLFSLATAQA-------------------WDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRL------RGTAVSLM 144 (406)
T ss_pred HHHHHHHHHHh-------------------ccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHH------HHHHHHHH
Confidence 88888777776 457889999999999999999999999999999888 99999999
Q ss_pred HHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHH
Q 008355 186 YLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVF 226 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~ 226 (568)
+.+.++|..++|.+++.+.+..+|++.|++.++..++..+.
T Consensus 145 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK11551 145 YCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPL 185 (406)
T ss_pred HHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888899999998877554444433
No 16
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.94 E-value=2.7e-25 Score=238.85 Aligned_cols=186 Identities=12% Similarity=0.107 Sum_probs=138.3
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHh--------CCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQL--------NQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTI 99 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--------g~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~ 99 (568)
.+.++...++.+.+......+.+..+ .+++.+ |.+..+.+++.+++.++..+++++.|+++||+ |||+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~-Grr~~~ 88 (479)
T PRK10077 11 FSITLVATLGGLLFGYDTAVISGTVE-SLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRF-GRRDSL 88 (479)
T ss_pred HHHHHHHHHHHHhcCcccceehHhHH-HHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHH
Confidence 44445555555555444433333333 345555 88899999999999999999999999999999 999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhh
Q 008355 100 ASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKS 179 (568)
Q Consensus 100 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 179 (568)
..+.++++++.+.+++....-. +....+..+...++++|+++|++.|...+...++++|++|+++ |+
T Consensus 89 ~~~~~l~~i~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~------rg 155 (479)
T PRK10077 89 KIAAVLFFISALGSAWPEFGFT-------SIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHI------RG 155 (479)
T ss_pred HHHHHHHHHHHHHHHhhccccc-------cccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhh------hh
Confidence 9999998888877765310000 0000011345678899999999999999999999999999998 99
Q ss_pred hhhhhHHHHHHHhHHHhhhhhhhe--------eccccchhhhhHHHHHHHHHHHHHH
Q 008355 180 SFFNWFYLSINIGALVASSVLVWI--------QMNVGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 180 ~~~~~~~~~~~ig~~~~p~~~~~i--------~~~~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
+++++.+.+..+|..+++.+++.+ .+.+|||+.|++.++..++..+..+
T Consensus 156 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~ 212 (479)
T PRK10077 156 KLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLY 212 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988766543 2457999999988766655544433
No 17
>PRK10054 putative transporter; Provisional
Probab=99.94 E-value=1e-24 Score=228.23 Aligned_cols=175 Identities=17% Similarity=0.169 Sum_probs=154.3
Q ss_pred CCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHH
Q 008355 26 GNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSII 105 (568)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~ 105 (568)
+.+|+.+.++...++..++++...++++.|+++++|++..++|++.+.+.+.+.++.++.|+++||+ |||+++.++.+.
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~k~~~~~~~~~ 82 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKF-DKKRYMLLAITA 82 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcchhHHHHHHH
Confidence 4467788999999999999999999999999999999999999999999999999999999999999 999999999988
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
..++.++.+++ ++.+.+++.|.+.+.+.+...++..+...|.+|+++ |++++++.
T Consensus 83 ~~~~~~~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~ 137 (395)
T PRK10054 83 FASGFIAIPLV-------------------NNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTS------KTKIFSLN 137 (395)
T ss_pred HHHHHHHHHHH-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhH------HHHHHHHH
Confidence 88888887776 456677778888888878778888999999999887 99999999
Q ss_pred HHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHH
Q 008355 186 YLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFF 227 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~ 227 (568)
+...++|..++|.+++++.+ .+|+.+|++.++..++.++..
T Consensus 138 ~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~ 178 (395)
T PRK10054 138 YTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFI 178 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHH
Confidence 99999999999999998875 799999998876666654443
No 18
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.94 E-value=9.6e-25 Score=231.51 Aligned_cols=168 Identities=11% Similarity=0.106 Sum_probs=143.9
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
+.++..++..++..+..+.+...+|.+ .+++|+|..+.|++.+.+.++..++.++.|+++||+ |||+++.++.++.++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~~~~~~~~~~~ 100 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEM-LADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRS-NARYFMGIGLIATGI 100 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHH-HHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc-CCchhHHHHHHHHHH
Confidence 334455555555555555655666655 457999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
+.++++++ .+.+.+++.|++.|++.|...+....++.|++|+++ |++++++++.+
T Consensus 101 ~~~~~~~~-------------------~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~------rg~~~~~~~~~ 155 (434)
T PRK11663 101 INILFGFS-------------------SSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTE------RGGWWAIWNTA 155 (434)
T ss_pred HHHHHHHH-------------------hHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHH------HHHHHHHHHHH
Confidence 99888877 457888899999999999999999999999999988 99999999999
Q ss_pred HHHhHHHhhhhhhheeccccchhhhhHHHHHHHHH
Q 008355 189 INIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIA 223 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~ 223 (568)
.++|..++|.+.+++.+.+|||+.|++.++..++.
T Consensus 156 ~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~ 190 (434)
T PRK11663 156 HNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVV 190 (434)
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999877654443
No 19
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=4.6e-24 Score=215.29 Aligned_cols=378 Identities=13% Similarity=0.122 Sum_probs=260.5
Q ss_pred CCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHH
Q 008355 26 GNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSII 105 (568)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~ 105 (568)
..+..++.+.++.|.....=+.....+|. +.+++|.|..++|+.++.|..+..++.|+...+.||+ .||++++..+++
T Consensus 10 ~~~~~l~aLa~~~F~igttEfv~~gLLp~-iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~-~Rr~lLl~~l~l 87 (394)
T COG2814 10 PMWLALLALALAAFAIGTTEFVPVGLLPP-IAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRL-ERRRLLLGLLAL 87 (394)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHhchHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHccc-chHHHHHHHHHH
Confidence 34667888888888888888877777775 7789999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
+.++.++++++ +|++.+.++|++.|+..|.+++...++.+++.|+++ |+++.++.
T Consensus 88 Fi~~n~l~alA-------------------p~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~------~~~Aiaiv 142 (394)
T COG2814 88 FIVSNLLSALA-------------------PSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGK------RGRALALV 142 (394)
T ss_pred HHHHHHHHHHh-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------hhhHHHHH
Confidence 99999999999 679999999999999999999999999999999999 99999999
Q ss_pred HHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCC-CCChhHHHHHHHHHHHhhcccccCC
Q 008355 186 YLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKP-GGSPLTRIMQVIVASFRKSNVVVPA 264 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (568)
..+..++..+|..++.++.+.+|||..|++.+...+++++..+...| .++.++ .+.+..+..+
T Consensus 143 ~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP-~~~~~~~~~~~~~~~~~--------------- 206 (394)
T COG2814 143 FTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP-PSEISGSLPGPLRTLLR--------------- 206 (394)
T ss_pred HHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC-CccCCCCCCcchhHHHH---------------
Confidence 99999999999999999999999999999998888877777666555 111111 1011000000
Q ss_pred cchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhh
Q 008355 265 DKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVY 344 (568)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (568)
..++.+.........+.....+..|
T Consensus 207 -------------------------------------------------------~l~~p~v~~~l~~t~l~~~g~F~~f 231 (394)
T COG2814 207 -------------------------------------------------------LLRRPGVLLGLLATFLFMTGHFALY 231 (394)
T ss_pred -------------------------------------------------------HhcCchHHHHHHHHHHHHcchhhhH
Confidence 0011111122222333344444555
Q ss_pred ccccceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHH
Q 008355 345 SQMSTMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMV 424 (568)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~ 424 (568)
.+...++.+... ++.. ..+++-...++..++...+.++ +.|| ++.+.+...+++.++.++
T Consensus 232 tYi~P~L~~v~g-~s~~-------~vs~~Ll~~Gv~~~~Gn~~gGr----l~dr--------~~~~~l~~~~~l~a~~~l 291 (394)
T COG2814 232 TYIRPFLESVAG-FSVS-------AVSLVLLAFGIAGFIGNLLGGR----LADR--------GPRRALIAALLLLALALL 291 (394)
T ss_pred HhHHHHHHHccC-CCHh-------HHHHHHHHHHHHHHHHHHHHhh----hccc--------cchhHHHHHHHHHHHHHH
Confidence 444443322211 1110 0111122222333333333333 4444 223355566677777766
Q ss_pred HHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHH
Q 008355 425 AAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLS 504 (568)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg 504 (568)
.+.... .+.+......++.+++........+.-..+.+ ++.+..+.+++....++|..+|
T Consensus 292 ~l~~~~-------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~~~~~a~sl~~aa~nlgia~G 351 (394)
T COG2814 292 ALTFTG-------------------ASPALALALLFLWGFAFSPALQGLQTRLARLA-PDAADLAGSLNVAAFNLGIALG 351 (394)
T ss_pred HHHHhc-------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CCchHHHHHHHHHHHHHHHHHH
Confidence 655443 13344444444455555444444444444422 5779999999999999999999
Q ss_pred HHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 008355 505 TLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKW 557 (568)
Q Consensus 505 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~ 557 (568)
..++|.+.+.. ++....++.+++.+++.+..+...++
T Consensus 352 A~lGG~v~~~~----------------g~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 352 AALGGLVLDAL----------------GYAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHHHHHHHhh----------------chHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999987753 23445677777777777666554443
No 20
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.93 E-value=3.7e-24 Score=221.28 Aligned_cols=161 Identities=12% Similarity=0.089 Sum_probs=126.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhcc
Q 008355 41 ERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVS 120 (568)
Q Consensus 41 ~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~ 120 (568)
++..+..+.+.+| .+++++|+|..+.|++.+++.+++.+++++.|+++||+ |||+++..+.+....+.......
T Consensus 3 ~~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~---- 76 (368)
T TIGR00903 3 SQAIWVTFSPVLS-LVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRA-FKRWFLFGSLATFAAAAGRLLDP---- 76 (368)
T ss_pred hhHHHHHHHhhHH-HHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cchHHHHHHHHHHHHHHHHHHHh----
Confidence 3444444545555 46778999999999999999999999999999999999 99988765544444433222221
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhh
Q 008355 121 GLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVL 200 (568)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~ 200 (568)
.++..+++.|+++|+|.+.. +.....++|++|+++ |++++++.+.+.++|..+++.++
T Consensus 77 ---------------~~~~~l~~~R~l~G~g~~~~-~~~~~~~~~~~~~~~------r~~a~~~~~~~~~lG~~l~~~~~ 134 (368)
T TIGR00903 77 ---------------FNYEWLLACQLLAALGQPFL-LNAFAPAASQIREER------RDLVISLLSFAMYLGIIFALAAG 134 (368)
T ss_pred ---------------ccHHHHHHHHHHHHhHhHHH-HHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788999999999999864 455566699999887 99999999999999999999999
Q ss_pred hheeccccchhhhhHHHHHHHHHHHHHHh
Q 008355 201 VWIQMNVGWGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 201 ~~i~~~~g~~~~f~~~~~~~~~~~~~~~~ 229 (568)
+++.+.+|||+.|++.++..++..++.+.
T Consensus 135 ~~l~~~~gWr~~f~~~~~l~~~~~~~~~~ 163 (368)
T TIGR00903 135 LKIYTAGGLQLLIIPIAAVAAAGIILVLA 163 (368)
T ss_pred HHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999866655444444333
No 21
>PRK10504 putative transporter; Provisional
Probab=99.93 E-value=8.3e-24 Score=226.88 Aligned_cols=178 Identities=14% Similarity=0.103 Sum_probs=155.2
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.+.++.+.+..++..+..+.+.+.+|.+.+ ++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 86 (471)
T PRK10504 9 RWQLWIVAFGFFMQSLDTTIVNTALPSMAQ-SLGESPLHMHMVIVSYVLTVAVMLPASGWLADRV-GVRNIFFTAIVLFT 86 (471)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHH
Confidence 445788888888988888888888888765 6999999999999999999999999999999999 99999999988888
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++.+++.++ .+.+.+++.|+++|++.+...|...+++.|.+|+++ |++++++.+.
T Consensus 87 ~~~~~~~~~-------------------~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 141 (471)
T PRK10504 87 LGSLFCALS-------------------GTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQ------YMAAMTFVTL 141 (471)
T ss_pred HHHHHHHHh-------------------CCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHH------HHHHHHHHHH
Confidence 888877766 457788999999999999999999999999999887 9999999999
Q ss_pred HHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCc
Q 008355 188 SINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSR 232 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 232 (568)
..++|..++|.+++.+.+..|||+.|++..+...+..+......+
T Consensus 142 ~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~ 186 (471)
T PRK10504 142 PGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMP 186 (471)
T ss_pred HHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999999887666555554444333
No 22
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.93 E-value=8.5e-24 Score=227.89 Aligned_cols=403 Identities=11% Similarity=0.033 Sum_probs=241.5
Q ss_pred CcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHH
Q 008355 27 NWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIY 106 (568)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~ 106 (568)
+|..+..+++..++..+..-.+..-+|. +.+++|.+..+.+|+.+.+.++..++.++.|+++||+ |||+++.++.+++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~-i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~-Grk~~l~~~~~~~ 81 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPT-LSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRI-GFKRLLMLGGTLF 81 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHH
Confidence 3445566667777776666555555555 5678999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccC-CCCCchhhhhhhhhhhhH
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQF-DETDDGEREKKSSFFNWF 185 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~-~~~~~~~~~~r~~~~~~~ 185 (568)
.+++++++.+ ++.+.++++|+++|+|.+...|.....+.+.+ |+++ |+++++++
T Consensus 82 ~~~~~~~~~a-------------------~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~------r~~~~g~~ 136 (495)
T PRK14995 82 GLASLAAAFS-------------------PTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQ------RNMALGVW 136 (495)
T ss_pred HHHHHHHHHc-------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH------HHHHHHHH
Confidence 9999999987 56888999999999999998888888887776 4555 99999999
Q ss_pred HHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHH-HHH-----HHHHhhcc
Q 008355 186 YLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIM-QVI-----VASFRKSN 259 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~ 259 (568)
....++|..+||.+++++.+.+|||+.|++.....++.+++.....++.++++.++.+..... ... ....+...
T Consensus 137 ~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~ 216 (495)
T PRK14995 137 AAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRRDQPLNLGHALMLIVAILLLVYSAKTAL 216 (495)
T ss_pred HHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCChHhHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999876666655544444333221111111111110 000 00111000
Q ss_pred cccCCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhH
Q 008355 260 VVVPADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIV 339 (568)
Q Consensus 260 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (568)
......+.... .+ .............+.+ ...|..+.+ -.++ +..........+...
T Consensus 217 --~~~~~~~~~~~-----------~~----~~~~~~l~~f~~~e~~---~~~p~~~~~--lf~~-~~~~~~~~~~~~~~~ 273 (495)
T PRK14995 217 --KGFLSLWVTSL-----------TL----LTGALLLGLFIRTQLA---ASRPMIDMR--LFTH-RIILSGVVMAMTAMI 273 (495)
T ss_pred --ccCCchHHHHH-----------HH----HHHHHHHHHHHHHHhc---CCCCCcCHH--HhCC-cccHHHHHHHHHHHH
Confidence 00000000000 00 0000000000000000 111211100 0011 111111111111111
Q ss_pred HHhhhccccceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHH
Q 008355 340 FATVYSQMSTMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLIS 419 (568)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~ 419 (568)
.+.....+.+.+.+...+.+. ...+.......+...+..++.++ +.+|. ++++.+..|+++.
T Consensus 274 ~~~~~~~~~~~~lq~v~g~s~-------~~ag~~~~~~~~~~~~~~~~~g~----l~~r~-------g~~~~~~~g~~~~ 335 (495)
T PRK14995 274 TLVGFELLMAQELQFVHGLSP-------LEAGMFMLPVMVASGFSGPIAGI----LVSRL-------GLRLVATGGMALS 335 (495)
T ss_pred HHHHHHHHHHHHHHHHcCCCH-------HHHHHHHHHHHHHHHHHHHHHHH----HHHHc-------CchHHHHHHHHHH
Confidence 111111111111111111000 01111222222333444444444 44553 3334566777777
Q ss_pred HHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHH
Q 008355 420 IFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAV 499 (568)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~l 499 (568)
+++++.+..... ..+.+......++.|+|.++..+.....+.+..|++.++.+.+++++..++
T Consensus 336 ~~~~~~l~~~~~-----------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l 398 (495)
T PRK14995 336 ALSFYGLAMTDF-----------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYEL 398 (495)
T ss_pred HHHHHHHHHhcC-----------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHH
Confidence 777665543321 113344555678889999999998999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhh
Q 008355 500 GNYLSTLLVTIVTKV 514 (568)
Q Consensus 500 g~~lg~~l~~~i~~~ 514 (568)
|+.+|+.+.+.+.+.
T Consensus 399 G~~~G~ai~g~i~~~ 413 (495)
T PRK14995 399 GAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987654
No 23
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.93 E-value=1.4e-24 Score=232.07 Aligned_cols=143 Identities=19% Similarity=0.329 Sum_probs=124.4
Q ss_pred hhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHH
Q 008355 64 NVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFV 143 (568)
Q Consensus 64 ~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (568)
..+.+++.+++.++..++.++.|+++||+ |||+++.++.++.+++.+++..... ..+.+.+++
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~-grr~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~ 132 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRF-GRKKSLLIIALLFVIGAILMGLAAF----------------ALSVEMLIV 132 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhh-hhHHHHHHHHHHHHHHHHHHHHhcc----------------ccchHHHHH
Confidence 88999999999999999999999999999 9999999999999999888866521 134568999
Q ss_pred HHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhh---hheeccccchhhhhHHHHHH
Q 008355 144 ALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVL---VWIQMNVGWGWGFGIPAVAM 220 (568)
Q Consensus 144 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~---~~i~~~~g~~~~f~~~~~~~ 220 (568)
+|+++|+|.+...+...++++|++|+++ |++++++++.+.++|..++|.++ +...+..+||+.|++.++..
T Consensus 133 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~ 206 (481)
T TIGR00879 133 GRVLLGIGVGIASALVPMYLSEIAPKAL------RGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPA 206 (481)
T ss_pred HHHHHHhhhhHHHhHHHHHHHccCChhh------hhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHH
Confidence 9999999999999999999999999998 99999999999999999999998 77777789999999966655
Q ss_pred HHHHHHHHh
Q 008355 221 AIAVVFFFS 229 (568)
Q Consensus 221 ~~~~~~~~~ 229 (568)
++.++..++
T Consensus 207 ~~~~~~~~~ 215 (481)
T TIGR00879 207 GLLFLGLFF 215 (481)
T ss_pred HHHHHHHhc
Confidence 555444433
No 24
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=9.6e-25 Score=217.12 Aligned_cols=175 Identities=17% Similarity=0.184 Sum_probs=157.4
Q ss_pred CCcceehhHhhHHHHHHHHHHHHHHHH---HHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHH
Q 008355 26 GNWKACRFILGNECCERLAYYGMSTNL---VNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASF 102 (568)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~ 102 (568)
++|| +.++...++.+.+||...-++ .+++.++.++|..|.|++.+++.+.+.++..+.|.++||. +.|+.+-.+
T Consensus 24 ~~~r--~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~-npr~fm~~g 100 (448)
T COG2271 24 KRWR--IQIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRS-NPRYFMAFG 100 (448)
T ss_pred HHHH--HHHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccC-CCceeehHH
Confidence 3444 778888889999999888765 4688999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhh
Q 008355 103 SIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFF 182 (568)
Q Consensus 103 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (568)
+++.++..+++++. .+...+.+..++.|+.+|.-+|++..+++.+++++| ||+..
T Consensus 101 Lilsai~nil~Gfs-------------------~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~e------RG~~~ 155 (448)
T COG2271 101 LILSAIVNILFGFS-------------------PSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKE------RGTWW 155 (448)
T ss_pred HHHHHHHHHHHhhh-------------------hHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccc------cCceE
Confidence 99999999999998 347778899999999999999999999999999999 99999
Q ss_pred hhHHHHHHHhHHHhhhhh--hheeccccchhhhhHHHHHHHHHHHHHH
Q 008355 183 NWFYLSINIGALVASSVL--VWIQMNVGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 183 ~~~~~~~~ig~~~~p~~~--~~i~~~~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
++.+.+.|+|+.+.|++. +++..+++||..|+.++++.++..+..+
T Consensus 156 siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~ 203 (448)
T COG2271 156 SIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILL 203 (448)
T ss_pred EEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999 8999889999999999876555444433
No 25
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.93 E-value=8e-24 Score=218.28 Aligned_cols=359 Identities=13% Similarity=0.086 Sum_probs=233.3
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHH
Q 008355 33 FILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTL 112 (568)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~ 112 (568)
.++...++..++.......+|.|.. +++.+..+.+++.+++.+...++.++.|+++||+ |||+++..+.++.+++.++
T Consensus 3 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~~~~~~~~~~~~~~~ 80 (365)
T TIGR00900 3 LLFAAQLISLIGTAITQVALPLYVL-AGTGSASVLSLAALAGMLPYVVLSPIAGALADRY-DRKKVMIGADLIRAVLVAV 80 (365)
T ss_pred ehHHHHHHHHHHHHHHHHHHHHHHH-HhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhh-chhHHHHHHHHHHHHHHHH
Confidence 4556677777777777777888776 5899999999999999999999999999999999 9999999999888888877
Q ss_pred HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHh
Q 008355 113 LTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIG 192 (568)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 192 (568)
..+....+. .+.+.+++.|++.|++.+...++..++++|++|+++ |++++++.+...++|
T Consensus 81 ~~~~~~~~~--------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g 140 (365)
T TIGR00900 81 LPFVALLGG--------------LNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQ------LTQANSLSQAVRSLF 140 (365)
T ss_pred HHHHHHcCC--------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HHHHHhHHHHHHHHH
Confidence 776632111 368889999999999999999999999999999887 999999999999999
Q ss_pred HHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhhh
Q 008355 193 ALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYET 272 (568)
Q Consensus 193 ~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 272 (568)
..++|.+++++.+..||++.|++.++..+++.+..+..+.+.+++ +++++.++ +. .+
T Consensus 141 ~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--------------------~~--~~ 197 (365)
T TIGR00900 141 YIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAA-SEIQALSN--------------------AV--LR 197 (365)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCC-ccccccch--------------------hH--HH
Confidence 999999999999999999999887766555544443332211100 00000000 00 00
Q ss_pred hhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHH-HHhhhHHHhhhcccccee
Q 008355 273 ADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPV-WASGIVFATVYSQMSTMF 351 (568)
Q Consensus 273 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 351 (568)
+ .. ..++ ...+.+.+...... ...............+++
T Consensus 198 ~-------------------~~----------------~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (365)
T TIGR00900 198 D-------------------TR----------------EGIK-----FVLKNPLLRTLLLLALLFNLVFAPAIVALFPYV 237 (365)
T ss_pred H-------------------HH----------------hHHH-----HHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 0 00 0000 00000111111111 111111111111111111
Q ss_pred EeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 008355 352 VLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEV 431 (568)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 431 (568)
..+..+.+. ...+.+.....+..++...+..+ +.||. ++++.+..+.++.+++.+......
T Consensus 238 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~----l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~- 298 (365)
T TIGR00900 238 QSKYLGRGS-------THYGWVLAAFGLGALLGALLLGL----LGRYF-------KRMALMTGAIFVIGLAILVVGLTP- 298 (365)
T ss_pred HHHHhCCch-------HHHHHHHHHHHHHHHHHHHHHHH----HHHHh-------chhHHHHHHHHHHHHHHHHHHhhc-
Confidence 111000000 01122222223333333333333 44442 333455556666666655544322
Q ss_pred HhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008355 432 VRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIV 511 (568)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i 511 (568)
+ +.+......++.+++.+...+..+++..|..|++.||++.|+.++...++..+++.+.|.+
T Consensus 299 -----------------~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l 360 (365)
T TIGR00900 299 -----------------P-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPL 360 (365)
T ss_pred -----------------h-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 2455566678889999999999999999999999999999999999999999999999987
Q ss_pred hh
Q 008355 512 TK 513 (568)
Q Consensus 512 ~~ 513 (568)
.+
T Consensus 361 ~~ 362 (365)
T TIGR00900 361 AD 362 (365)
T ss_pred HH
Confidence 65
No 26
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.92 E-value=4.4e-23 Score=215.88 Aligned_cols=176 Identities=14% Similarity=0.200 Sum_probs=151.9
Q ss_pred ccCCCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHH
Q 008355 23 KKTGNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASF 102 (568)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~ 102 (568)
..++.|+.+..+.+..++.....|.....+|. +.+++|.++.+.++..+++.++..++.++.|+++||+ |||+++..+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-grr~~~~~~ 91 (394)
T PRK10213 14 ITRPNWSAVFSVAFCVACLIIVEFLPVSLLTP-MAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQAT-DRRYVVILF 91 (394)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHhhHHH-HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CcHHHHHHH
Confidence 34446776666666666666666666666666 5568999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhh
Q 008355 103 SIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFF 182 (568)
Q Consensus 103 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (568)
.++.+++.+++.++ ++.+.+++.|+++|++.|...|...+++.|++|+++ |+++.
T Consensus 92 ~~~~~~~~~~~~~~-------------------~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~------~~~a~ 146 (394)
T PRK10213 92 AVLLTLSCLLVSFA-------------------NSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRT------VPKAL 146 (394)
T ss_pred HHHHHHHHHHHHHH-------------------ChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhH------HHHHH
Confidence 99999998888877 568899999999999999999999999999999888 99999
Q ss_pred hhHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHH
Q 008355 183 NWFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVV 225 (568)
Q Consensus 183 ~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~ 225 (568)
++...+.++|..++|.+++++.+.+|||+.|++.++..++..+
T Consensus 147 ~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l 189 (394)
T PRK10213 147 SVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIF 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987765544433
No 27
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.92 E-value=1.2e-23 Score=221.14 Aligned_cols=381 Identities=13% Similarity=0.068 Sum_probs=242.4
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhh-----hhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVT-----ASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFS 103 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~-----~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~ 103 (568)
|....+.+..++...++....+.+|.|++ ++|.+..+ .|++.+++.+...++.++.|+++||+ |||+.+..+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~ 91 (408)
T PRK09874 14 RNLTVAWLGCFLTGAAFSLVMPFLPLYVE-QLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRK-GRKIMLLRSA 91 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHH-HhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-CcHHHHHHHH
Confidence 44566667788888888888888998886 58888654 48888899999999999999999999 9999999998
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhh
Q 008355 104 IIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFN 183 (568)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (568)
+..+++.+++... .+.+.+++.|++.|++.+ ..+...+++.|.+|+++ |+++.+
T Consensus 92 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~------~~~~~~ 145 (408)
T PRK09874 92 LGMGIVMVLMGLA-------------------QNIWQFLILRALLGLLGG-FVPNANALIATQVPRNK------SGWALG 145 (408)
T ss_pred HHHHHHHHHHHHH-------------------hhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhh------hhHHHH
Confidence 8888888877766 457889999999999865 45777888899999888 999999
Q ss_pred hHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccC
Q 008355 184 WFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVP 263 (568)
Q Consensus 184 ~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (568)
+.+...++|..++|.+++.+.+..+|++.|++.++..++..+......++..+ +.+++.....
T Consensus 146 ~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--------------- 208 (408)
T PRK09874 146 TLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQ--PVSKKEMLHM--------------- 208 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcc--cccchhhhHH---------------
Confidence 99999999999999999999888999999998877665555444333222110 0000000000
Q ss_pred CcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHH-HHhhhHHHh
Q 008355 264 ADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPV-WASGIVFAT 342 (568)
Q Consensus 264 ~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 342 (568)
++ ..+ . . ++.+........ .........
T Consensus 209 -----------~~-~~~---~------------------------~------------~~~~~~~~~~~~~~~~~~~~~~ 237 (408)
T PRK09874 209 -----------RE-VVT---S------------------------L------------KNPKLVLSLFVTTLIIQVATGS 237 (408)
T ss_pred -----------HH-HHH---h------------------------C------------cCCchHHHHHHHHHHHHHHHHH
Confidence 00 000 0 0 000000001100 111111100
Q ss_pred hhccccceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHH
Q 008355 343 VYSQMSTMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFS 422 (568)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~ 422 (568)
....++.+...... ... ......+.+.....+..++..+..++ +.+| .++++.+..+.++..++
T Consensus 238 ~~~~~~~~~~~~~~----~~~-~~~~~~g~~~~~~~l~~~~~~~~~g~----l~dr-------~g~~~~~~~~~~~~~~~ 301 (408)
T PRK09874 238 IAPILTLYVRELAG----NVS-NIAFISGMIASVPGVAALLSAPRLGK----LGDR-------IGPEKILITALIFSVLL 301 (408)
T ss_pred HHHHHHHHHHHHhc----cch-HHHHHHHHHHHHHHHHHHHHHHHHHH----HHhc-------cccchhHHHHHHHHHHH
Confidence 00111111110000 000 00000011111122223333333333 3444 33334566666655555
Q ss_pred HHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHH
Q 008355 423 MVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNY 502 (568)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~ 502 (568)
.+...... +.+.+....++.+++.+...|...+.+.+..|++.||+..++++....+|..
T Consensus 302 ~~~~~~~~--------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ 361 (408)
T PRK09874 302 LIPMSFVQ--------------------TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNV 361 (408)
T ss_pred HHHHHHhc--------------------cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHH
Confidence 54433221 3444555667788899988999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 008355 503 LSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKW 557 (568)
Q Consensus 503 lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~ 557 (568)
+||.+.+.+.+.. | ++..|++.+++.+++.+..++..++
T Consensus 362 ~gp~~~G~l~~~~------g----------~~~~f~~~~~~~l~~~~~~~~~~~~ 400 (408)
T PRK09874 362 TGPLMGAAISANY------G----------FRAVFLVTAGVVLFNAVYSWNSLRR 400 (408)
T ss_pred hhHHHHHHHHhhc------c----------hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999876532 2 3457888888888887766554443
No 28
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.92 E-value=1.7e-23 Score=217.80 Aligned_cols=154 Identities=18% Similarity=0.323 Sum_probs=137.7
Q ss_pred HHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 008355 50 TNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKD 129 (568)
Q Consensus 50 ~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 129 (568)
....+++++++|.+..+.+++.+++.++..++.++.|+++||+ |||+++..+.++.+++..+++++
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~~~~~~~~~~------------- 79 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRF-GARKTLAVFIVIWGVFTGLQAFA------------- 79 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhc-CcceeeHHHHHHHHHHHHHHHHH-------------
Confidence 3444568889999999999999999999999999999999999 99999999999999999888887
Q ss_pred CCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccccc
Q 008355 130 ACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVGW 209 (568)
Q Consensus 130 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g~ 209 (568)
.+.+.+++.|++.|++.+...+....++.|.+|+++ |++++++.+...++|..++|.+++.+.+..+|
T Consensus 80 ------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~ 147 (399)
T TIGR00893 80 ------GAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASE------RATAVSIFNSAQGLGGIIGGPLVGWILIHFSW 147 (399)
T ss_pred ------cCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHH------HHHHHHHHHHhchHHHHHHHHHHHHHHHhCCc
Confidence 468889999999999999999999999999999888 99999999999999999999999999899999
Q ss_pred hhhhhHHHHHHHHHHHHHHh
Q 008355 210 GWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 210 ~~~f~~~~~~~~~~~~~~~~ 229 (568)
++.|++.++..++..+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~ 167 (399)
T TIGR00893 148 QWAFIIEGVLGIIWGVLWLK 167 (399)
T ss_pred hHHHHHHHHHHHHHHHHhhh
Confidence 99999877665555444433
No 29
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.92 E-value=1.1e-22 Score=219.13 Aligned_cols=176 Identities=18% Similarity=0.133 Sum_probs=131.3
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhh-hhh-----hHHHHHHHHHhhhhhHHHHhhhccCchHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVT-ASN-----NVTNWSGTCYITPLIGAFLADSYMGRFWTIAS 101 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~-~g~-----~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~ 101 (568)
+|.++...++.+++.+.+.. ..+..+++.++++.+... .++ +.++..++..++.++.|+++||+ |||+++.+
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 92 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGV-YGFVAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKY-GRQKILAI 92 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccHHHHHH
Confidence 44556666777887776654 445556788887543322 122 23566788889999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhh
Q 008355 102 FSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSF 181 (568)
Q Consensus 102 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 181 (568)
+.+++++++++++++.+...+ ....+..+++.|+++|+|.|+..+....+++|++|+++ |++.
T Consensus 93 ~~~l~~i~~~~~a~~~~~~~~-----------g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~------Rg~~ 155 (490)
T PRK10642 93 TIVIMSISTFCIGLIPSYATI-----------GIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRK------RGFM 155 (490)
T ss_pred HHHHHHHHHHHHHhcccHHHH-----------HHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCC------CcHH
Confidence 999999999999988221100 00001248899999999999999999999999999998 9999
Q ss_pred hhhHHHHHHHhHHHhhhhhhhee--------ccccchhhhhHHHHHHHH
Q 008355 182 FNWFYLSINIGALVASSVLVWIQ--------MNVGWGWGFGIPAVAMAI 222 (568)
Q Consensus 182 ~~~~~~~~~ig~~~~p~~~~~i~--------~~~g~~~~f~~~~~~~~~ 222 (568)
.++...+..+|..+|+.+...+. ..+|||++|++.++..++
T Consensus 156 ~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~ 204 (490)
T PRK10642 156 GSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII 204 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH
Confidence 99998888888888876554332 257999999987654443
No 30
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.92 E-value=4.2e-23 Score=216.02 Aligned_cols=367 Identities=14% Similarity=0.070 Sum_probs=234.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhc
Q 008355 40 CERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASV 119 (568)
Q Consensus 40 ~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~ 119 (568)
..+..++.+.+.+| .+++++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++++++.++++++
T Consensus 20 ~~~~~~~~~~~~lp-~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~-G~r~~l~~~~~l~~~~~~~~~~a--- 94 (393)
T PRK09705 20 NMRPLLTSVGPLLP-QLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHV-SERRSVAISLLLIAVGALMRELY--- 94 (393)
T ss_pred HcchhhhccchhHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHh-CchHHHHHHHHHHHHHHHHHHHC---
Confidence 33333344555555 57789999999999999999999999999999999999 99999999999999999999988
Q ss_pred cCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhh
Q 008355 120 SGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSV 199 (568)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~ 199 (568)
++++.++++|+++|+|.+...+....++.+++| ++ |+++++.+..+.++|..+++.+
T Consensus 95 ----------------~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~~~g~~~g~~~ 151 (393)
T PRK09705 95 ----------------PQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QR------TPLVMGLWSAALMGGGGLGAAI 151 (393)
T ss_pred ----------------cchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-cc------chhHHHHHHHHHHHHHHHHHHH
Confidence 457789999999999999999999999999987 66 9999999999999999999999
Q ss_pred hhheeccc-cchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhhhhhhhhh
Q 008355 200 LVWIQMNV-GWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYETADEECN 278 (568)
Q Consensus 200 ~~~i~~~~-g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 278 (568)
++++.++. +||+.+.+.++..++.++..+...++ .|++++ . +
T Consensus 152 ~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---------------------~----------~-- 194 (393)
T PRK09705 152 TPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAR----EVASSH---------------------K----------T-- 194 (393)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcC----CCcccc---------------------C----------C--
Confidence 99888775 89988766554443333322222111 010000 0 0
Q ss_pred hccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhccccceeEeecccc
Q 008355 279 IQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMSTMFVLQGNTM 358 (568)
Q Consensus 279 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (568)
+..+.+.. ++.+.....+...+....++....+.+.++.+ ...
T Consensus 195 ------------------------------~~~~~~~l-----~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~--~g~ 237 (393)
T PRK09705 195 ------------------------------TTTPVRVV-----FTPRAWTLGVYFGLINGGYASLIAWLPAFYIE--IGA 237 (393)
T ss_pred ------------------------------CcCCcccc-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCC
Confidence 00000000 00111111111112222222233333333221 111
Q ss_pred cCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 008355 359 DQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLNIVK 438 (568)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 438 (568)
+.. ..+.......+..++...+.++ +.|| .++++.+..++.+..++.+.+....
T Consensus 238 s~~-------~ag~~~~~~~i~~i~g~~~~g~----l~~r-------~~~~~~~~~~~~l~~~~~~~~~~~~-------- 291 (393)
T PRK09705 238 SAQ-------YSGSLLALMTLGQAAGALLMPA----MARH-------QDRRKLLMLALVLQLVGFCGFIWLP-------- 291 (393)
T ss_pred Chh-------hhhHHHHHHHHHHHHHHHHHHH----HHhh-------ccchHHHHHHHHHHHHHHHHHHHcc--------
Confidence 111 1112222223333333333333 4444 3333456666666666655443222
Q ss_pred ccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 008355 439 RNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAP-DAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTK 517 (568)
Q Consensus 439 ~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P-~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~ 517 (568)
.+...+ ...+.+++.+...|.......+..| ++.+|+..|+.+....++..++|.+.+.+.+..+
T Consensus 292 -----------~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g- 357 (393)
T PRK09705 292 -----------LQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG- 357 (393)
T ss_pred -----------chHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-
Confidence 011111 1344577777777777777777774 7889999999999999999999999999887542
Q ss_pred CCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhceecc
Q 008355 518 NGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFTYKK 562 (568)
Q Consensus 518 ~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~~ 562 (568)
++...|.+.++++++..+..+.+.+|++.+.
T Consensus 358 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (393)
T PRK09705 358 --------------NYLMDWAFHALCVVGLMIITLRFAPARFPQL 388 (393)
T ss_pred --------------CchHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 1234567777777777777777777766554
No 31
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.92 E-value=2.4e-23 Score=221.96 Aligned_cols=172 Identities=16% Similarity=0.120 Sum_probs=132.2
Q ss_pred hHhhHHHHHHHHHHHH---HHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 008355 33 FILGNECCERLAYYGM---STNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLG 109 (568)
Q Consensus 33 ~~~~~~~~~~~~~~~~---~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 109 (568)
.++...++....+|.. .....+|+.++ |++..+.+++.+++.++..+++++.|+++||+ |||+++.++.++.+++
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~-g~k~~l~~~~~~~~i~ 106 (452)
T PRK11273 29 QIFLGIFFGYAAYYLVRKNFALAMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILAAAV 106 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhcc-CCchhHHHHHHHHHHH
Confidence 3334444444444433 23344577777 99999999999999999999999999999999 9999999999998888
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHH
Q 008355 110 MTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSI 189 (568)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (568)
.+.+++... ...+.+.+++.|++.|++.|...|.....+.|++|+++ |++++++++.+.
T Consensus 107 ~~~~~~~~~---------------~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~ 165 (452)
T PRK11273 107 MLFMGFVPW---------------ATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE------RGGIVSVWNCAH 165 (452)
T ss_pred HHHHHhhhc---------------ccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH------HHHHHHHHHHHH
Confidence 888776521 01356778899999999999988888888999999988 999999999999
Q ss_pred HHhHH-HhhhhhhheeccccchhhhhHHHHHHHHHHHHH
Q 008355 190 NIGAL-VASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFF 227 (568)
Q Consensus 190 ~ig~~-~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~ 227 (568)
++|+. .+|+++..+....|||+.|++.++..++..++.
T Consensus 166 ~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~ 204 (452)
T PRK11273 166 NVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFA 204 (452)
T ss_pred HhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 99874 455544333334589999998776555544333
No 32
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.92 E-value=1.1e-22 Score=211.30 Aligned_cols=169 Identities=13% Similarity=0.106 Sum_probs=137.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHH-HHHHHHHHHHHH
Q 008355 35 LGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIAS-FSIIYCLGMTLL 113 (568)
Q Consensus 35 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~-~~~~~~i~~~~~ 113 (568)
++..++..++.....+.++.|+++++|.|..+.|++.+++.+...+..++.|+++||+ ||||.++. +.+...++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 81 (375)
T TIGR00899 3 LLVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQ-GDRKGLILFCCLLAALACLLF 81 (375)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-CCchHHHHHHHHHHHHHHHHH
Confidence 4557778888888889999999999999999999999999999999999999999999 99887655 445555666666
Q ss_pred HHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhh--hhhHHHHHHH
Q 008355 114 TLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSF--FNWFYLSINI 191 (568)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~--~~~~~~~~~i 191 (568)
+.+ ++.+.+++.|+++|.+.+...|...++..|..|+++ |.++ .+..+...++
T Consensus 82 ~~~-------------------~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 136 (375)
T TIGR00899 82 AWN-------------------RNYFLLLVLGVLLSSFASTANPQLFALAREHADRTG------REAVMFSSVMRAQISL 136 (375)
T ss_pred Hhc-------------------chHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcc------hhhHHHHHHHHHHHhH
Confidence 665 457778888988888878788888888888877655 5544 5778888899
Q ss_pred hHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHh
Q 008355 192 GALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 192 g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~ 229 (568)
|..++|.+++++.+.+|||+.|++.++..++..+..+.
T Consensus 137 g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 137 AWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWL 174 (375)
T ss_pred HHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998899999999988766555544433
No 33
>PRK09952 shikimate transporter; Provisional
Probab=99.92 E-value=2.3e-22 Score=213.39 Aligned_cols=177 Identities=10% Similarity=0.095 Sum_probs=131.7
Q ss_pred CCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHh--CCChhhhhhhHH-----HHHHHHHhhhhhHHHHhhhccCchHH
Q 008355 26 GNWKACRFILGNECCERLAYYGMSTNLVNYLQKQL--NQGNVTASNNVT-----NWSGTCYITPLIGAFLADSYMGRFWT 98 (568)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l--g~s~~~~g~~~~-----~~~~~~~i~~~~~G~laDr~~Grk~~ 98 (568)
.++|.++..++..+++......+....+.++.+++ +.++. .+++.+ +..++..++.++.|+++||+ |||++
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~-Grr~~ 96 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRL-GRKRM 96 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhh-ccHHH
Confidence 34566666777777777776655555555666555 66665 455432 33445567788889999999 99999
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhh
Q 008355 99 IASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKK 178 (568)
Q Consensus 99 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 178 (568)
+..+.+++++++++++++.+.... .......+++.|+++|++.|+..|....++.|++|+++ |
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------r 159 (438)
T PRK09952 97 LMLTVWMMGIATALIGLLPSFSTI-----------GWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNK------K 159 (438)
T ss_pred HHHHHHHHHHHHHHHhcCCcHHHH-----------HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCC------C
Confidence 999999999999999987221100 00012258889999999999999999999999999998 9
Q ss_pred hhhhhhHHHHHHHhHHHhhhhhhhee--------ccccchhhhhHHHHHHH
Q 008355 179 SSFFNWFYLSINIGALVASSVLVWIQ--------MNVGWGWGFGIPAVAMA 221 (568)
Q Consensus 179 ~~~~~~~~~~~~ig~~~~p~~~~~i~--------~~~g~~~~f~~~~~~~~ 221 (568)
++..+..+.+..+|..+++.+..++. ..+|||++|++.++..+
T Consensus 160 g~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 160 AFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 99999999999999988877666543 35799999998776543
No 34
>TIGR00898 2A0119 cation transport protein.
Probab=99.92 E-value=3.5e-23 Score=224.08 Aligned_cols=388 Identities=14% Similarity=0.117 Sum_probs=231.8
Q ss_pred HHHHHhCCC---hhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 008355 55 YLQKQLNQG---NVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDAC 131 (568)
Q Consensus 55 yl~~~lg~s---~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 131 (568)
.+.+++|++ ..+.+++.+++.++..++.++.|+++||+ |||+++.++.++.+++.++.+++
T Consensus 114 ~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~-Grr~~~~~~~~~~~i~~~~~~~~--------------- 177 (505)
T TIGR00898 114 TIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRF-GRKKVLLLSTLVTAVSGVLTAFS--------------- 177 (505)
T ss_pred cEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhc-cchHHHHHHHHHHHHHHHHHHHc---------------
Confidence 356789998 88999999999999999999999999999 99999999999999988888877
Q ss_pred CCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccccchh
Q 008355 132 HPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVGWGW 211 (568)
Q Consensus 132 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~ 211 (568)
.+++.+++.|++.|++.+...+....++.|++|+++ |+++.++...+..+|.+++|.++..+.+ ||+
T Consensus 178 ----~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~ 244 (505)
T TIGR00898 178 ----PNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQ------RAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRW 244 (505)
T ss_pred ----ccHHHHHHHHHHHHhhccchHHHHHHHhheecChhh------hHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHH
Confidence 568889999999999999999999999999999998 9999999999999999999998776643 999
Q ss_pred hhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhhhhhhhhhhccCccccCCccc
Q 008355 212 GFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYETADEECNIQGSRKLESTSKF 291 (568)
Q Consensus 212 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~ 291 (568)
.|++.++..++..+..++.++..+....+++ .++..+.+....+......++ ...+...+++.+. . +
T Consensus 245 ~~~~~~i~~~~~~~~~~~~~esp~~l~~~~~-~~~a~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~------~--~- 311 (505)
T TIGR00898 245 LQLAVSLPTFLFFLLSWFVPESPRWLISQGR-IEEALKILQRIAKINGKKLPA---EVLSLSLEKDLSS------S--K- 311 (505)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHCCC-HHHHHHHHHHHHHHcCCCCCH---HHHhhhhhhhhhh------c--c-
Confidence 9998877666555554433221111111111 112222222222211111000 0000000000000 0 0
Q ss_pred hhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhccccceeEeecccccCCCCCCcccCch
Q 008355 292 KFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMSTMFVLQGNTMDQHMGPNFKIPSA 371 (568)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (568)
.+.++++..+++ ..++..+.....+.... ..+... ..+. . ..+ ....
T Consensus 312 -----------------~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~---~~~~~~-~~~~-~------~~~----~~~~ 358 (505)
T TIGR00898 312 -----------------KQYSFLDLFRTP-NLRKTTLCLMMLWFTTA---FSYYGL-VLDL-G------NLG----GNIY 358 (505)
T ss_pred -----------------CCCcHHHHhCCh-HHHHHHHHHHHHHHHHH---HHHHHH-hccc-c------ccC----CChH
Confidence 000111000000 11111111111111111 111100 0000 0 011 0111
Q ss_pred hhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceee
Q 008355 372 SLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMT 451 (568)
Q Consensus 372 ~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (568)
.......+..+....+..+ +.+|.+ +++.+.+++++.+++++....... ..
T Consensus 359 ~~~~~~~~~~i~~~~~~~~----l~dr~g-------rr~~~~~~~~~~~~~~l~~~~~~~------------------~~ 409 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLL----LIDRLG-------RRYTMAASLLLAGVALLLLLFVPV------------------DL 409 (505)
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHhC-------CHHHHHHHHHHHHHHHHHHHHcCC------------------Cc
Confidence 1111122222223333333 445533 334566777777777665554321 12
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccc
Q 008355 452 IFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRG 531 (568)
Q Consensus 452 ~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~ 531 (568)
.++.+...++.+++....++..+.+..|.+|++.|++++|+.++...+|++++|.+.+ +.+..
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~~---------------- 472 (505)
T TIGR00898 410 YFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEKW---------------- 472 (505)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHHH----------------
Confidence 2334444555667777777888999999999999999999999999999999999888 43211
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhceeccccc
Q 008355 532 HLDYFYWLLTILSVLNFLVYLWIAKWFTYKKATG 565 (568)
Q Consensus 532 ~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~~~~~ 565 (568)
....+++++++++++.+..+ +.||+++++.+|
T Consensus 473 -~~~~~~~~~~~~~~~~~~~~-~lpet~~~~l~~ 504 (505)
T TIGR00898 473 -LFLPLVLFGGLALLAGILTL-FLPETKGVPLPE 504 (505)
T ss_pred -HhhHHHHHHHHHHHHHHHHH-cCcCCCCCCCCC
Confidence 12346677777777765544 567887776654
No 35
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.92 E-value=1.6e-22 Score=214.48 Aligned_cols=175 Identities=18% Similarity=0.184 Sum_probs=130.6
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHHhC---CChhhhhhhHHHH---HHHHHhhhhhHHHHhhhccCchHHHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQLN---QGNVTASNNVTNW---SGTCYITPLIGAFLADSYMGRFWTIASFS 103 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg---~s~~~~g~~~~~~---~~~~~i~~~~~G~laDr~~Grk~~~~~~~ 103 (568)
.+....++.+++...... ..+..+++.++++ .+..+.+.+.+.+ .++..++.+++|+++||+ |||+++..+.
T Consensus 23 ~~~~~~~~~~~~~~d~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~-Grr~~l~~~~ 100 (432)
T PRK10406 23 AIVGASSGNLVEWFDFYV-YSFCSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKH-GRKKSMLISV 100 (432)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHH
Confidence 344444556676666655 5666678888874 4555444444444 444448999999999999 9999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhh
Q 008355 104 IIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFN 183 (568)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (568)
+++++++++++++.+.... .......+++.|+++|+|.|+..|...++++|++|+++ |+++.+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~------rg~~~~ 163 (432)
T PRK10406 101 CMMCFGSLVIACLPGYETI-----------GTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGR------KGFYAS 163 (432)
T ss_pred HHHHHHHHHHhhcCCchhH-----------HHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCc------ccHHHH
Confidence 9999999998887221100 00123568899999999999999999999999999988 999999
Q ss_pred hHHHHHHHhHHHhhhhhhhee--------ccccchhhhhHHHHHHHHH
Q 008355 184 WFYLSINIGALVASSVLVWIQ--------MNVGWGWGFGIPAVAMAIA 223 (568)
Q Consensus 184 ~~~~~~~ig~~~~p~~~~~i~--------~~~g~~~~f~~~~~~~~~~ 223 (568)
+.+.+.+.|..+++.+...+. ..+|||++|++.++..++.
T Consensus 164 ~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 164 FQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHH
Confidence 998888899888887655443 2579999999877655443
No 36
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.92 E-value=6.1e-23 Score=215.07 Aligned_cols=173 Identities=16% Similarity=0.247 Sum_probs=150.6
Q ss_pred CCCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHH
Q 008355 25 TGNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSI 104 (568)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~ 104 (568)
+.+|+.+...++..+.+.+..+......+ .+++++|.+..+.+++.+.+.++..++.++.|+++||+ |||+++..+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~~~~~~~ 85 (405)
T TIGR00891 8 RAQWNAFSAAWLGWLLDAFDFFLVALVLA-EVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRY-GRRLPMVTSIV 85 (405)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHH
Confidence 35577777888888888888777666555 56788999999999999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhh
Q 008355 105 IYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNW 184 (568)
Q Consensus 105 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (568)
+.+++.++++++ .+.+.+++.|++.|++.+...+...+++.|++|+++ |+++.++
T Consensus 86 ~~~~~~~~~~~~-------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~ 140 (405)
T TIGR00891 86 LFSAGTLACGFA-------------------PGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHL------RNKASGL 140 (405)
T ss_pred HHHHHHHHHHHh-------------------ccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhh------hhHHHHH
Confidence 999988888876 457889999999999999999999999999999988 9999999
Q ss_pred HHHHHHHhHHHhhhhhhheecccc--chhhhhHHHHHHHHHH
Q 008355 185 FYLSINIGALVASSVLVWIQMNVG--WGWGFGIPAVAMAIAV 224 (568)
Q Consensus 185 ~~~~~~ig~~~~p~~~~~i~~~~g--~~~~f~~~~~~~~~~~ 224 (568)
.+.+.++|..++|.+++.+.+..+ |++.|++.++..++.+
T Consensus 141 ~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~ 182 (405)
T TIGR00891 141 LISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL 182 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Confidence 999999999999999998877666 9999987665444433
No 37
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.92 E-value=1.2e-23 Score=225.24 Aligned_cols=173 Identities=13% Similarity=0.045 Sum_probs=135.5
Q ss_pred ehhHhhHHHHHHHHHHHHHH---HHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMST---NLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~---~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.+.++...++..+..|.... ...+.+.+++|++..+.|++.+++.+++.+++++.|+++||+ |||+++..+.++.+
T Consensus 27 ~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~ 105 (467)
T PRK09556 27 FMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGK-NTKQFLPFLLILSA 105 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhcc-CccchHHHHHHHHH
Confidence 33344444444444443322 224467789999999999999999999999999999999999 99999999888888
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++.+.++..... ...+.+.+++.|+++|++.+...|....+++|++|+++ |+++++++..
T Consensus 106 ~~~~~~~~~~~~--------------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------rg~a~gi~~~ 165 (467)
T PRK09556 106 ICMLGFGASLGS--------------GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRK------RGRFLGFWNI 165 (467)
T ss_pred HHHHHHHHHHhc--------------ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccc------eeeeEEeeec
Confidence 777766653110 01468889999999999999999999999999999999 9999999999
Q ss_pred HHHHhHHHhhhhhhheeccc---cchhhhhHHHHHHHHHH
Q 008355 188 SINIGALVASSVLVWIQMNV---GWGWGFGIPAVAMAIAV 224 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~---g~~~~f~~~~~~~~~~~ 224 (568)
+.++|+.+++.+..++.+.. +|+..|.+.++..++..
T Consensus 166 ~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~ 205 (467)
T PRK09556 166 SHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIG 205 (467)
T ss_pred ccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHH
Confidence 99999999999887665543 58888877665544433
No 38
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.92 E-value=1.8e-22 Score=212.30 Aligned_cols=166 Identities=14% Similarity=0.089 Sum_probs=138.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHH
Q 008355 36 GNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTL 115 (568)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~ 115 (568)
+.+++...+...+.+.++. +.+++|.|..+.++..+.+.++..++.++.|+++||+ |||+.+..+.++.+++.+++..
T Consensus 20 l~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~ 97 (406)
T PRK15402 20 LFEFATYIANDMIQPGMLA-VVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRI-GRRPVMLAGVAFFILTCLAILL 97 (406)
T ss_pred HHHHHHHhhhhhHhcchHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHH
Confidence 3333333444555555554 5578999999999999999999999999999999999 9999999999988888888877
Q ss_pred hhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHH
Q 008355 116 TASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALV 195 (568)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 195 (568)
+ .+.+.+++.|+++|++.+...+...+++.|.+|+++ |.++.++......+|..+
T Consensus 98 ~-------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~~~~~ 152 (406)
T PRK15402 98 A-------------------QSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEAD------AIKITALMANVALLAPLL 152 (406)
T ss_pred H-------------------ccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhH------HHHHHHHHHHHHHHHHHH
Confidence 6 457789999999999999888888999999999887 899999988888899999
Q ss_pred hhhhhhheeccccchhhhhHHHHHHHHHHHHHH
Q 008355 196 ASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 196 ~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
+|.+++++.+..+|++.|++.++..++..+..+
T Consensus 153 g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 153 GPLVGAALIHVLPWRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred HHHHHHHHHHccCccHHHHHHHHHHHHHHHHHH
Confidence 999999998889999999887766665554443
No 39
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.91 E-value=2.7e-23 Score=215.15 Aligned_cols=157 Identities=17% Similarity=0.142 Sum_probs=133.7
Q ss_pred HHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 008355 44 AYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLK 123 (568)
Q Consensus 44 ~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~ 123 (568)
..|.. ..+.+++.+++|+|..+.+++.+++.++..++.++.|+++||+ |||+++.++.++.+++.++++++
T Consensus 18 ~~~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~-G~r~~~~~~~~~~~~~~~~~~~~------- 88 (377)
T TIGR00890 18 YVYTW-TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKF-GPRAVAMLGGILYGLGFTFYAIA------- 88 (377)
T ss_pred HHhhh-hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHc-CccchhHHhHHHHHHHHHHHHHH-------
Confidence 34444 4455678889999999999999999999999999999999999 99999999999999999988887
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhhe
Q 008355 124 PSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWI 203 (568)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i 203 (568)
++.+.+++.|++.|++.+...+.....+.+++| ++ |+++.++...+.++|..+++.+.+.+
T Consensus 89 ------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~~~~~~~~~~ 149 (377)
T TIGR00890 89 ------------DSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DK------RGLASGIIIGGYGLGSFILSPLITSV 149 (377)
T ss_pred ------------HHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cc------cHHHHHHHHHhcchhHhHHHHHHHHH
Confidence 568889999999999999888888888888886 45 89999999999999998877777777
Q ss_pred eccccchhhhhHHHHHHHHHHHHHH
Q 008355 204 QMNVGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 204 ~~~~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
.+..|||+.|++.++..++..+..+
T Consensus 150 ~~~~~~~~~f~~~~~~~~~~~~~~~ 174 (377)
T TIGR00890 150 INLEGVPAAFIYMGIIFLLVIVLGA 174 (377)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHH
Confidence 7778999999988776655544433
No 40
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.91 E-value=1.2e-22 Score=213.99 Aligned_cols=177 Identities=12% Similarity=0.111 Sum_probs=149.0
Q ss_pred CcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHH
Q 008355 27 NWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIY 106 (568)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~ 106 (568)
+|+.++.+++..+++......+.. ..+.+++++|++..+.|++.+++.++..+++++.|+++||+ |||+++..+.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~d~~~~~~-~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-G~r~~~~~~~~~~ 83 (412)
T TIGR02332 6 FRRLIIFLFILFIFSFLDRINIGF-AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAII-GARRWIAGIMVLW 83 (412)
T ss_pred hhHHHHHHHHHHHHHHhhhhhHHH-HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHh-ChHHHHHHHHHHH
Confidence 456556666666665555554444 44578999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY 186 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (568)
.++..+++++ ++.+.+++.|++.|++.|...|....++.|++|+++ |++++++++
T Consensus 84 ~~~~~~~~~~-------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------rg~~~~~~~ 138 (412)
T TIGR02332 84 GIASTATMFA-------------------TGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYF------RARANALFM 138 (412)
T ss_pred HHHHHHHHHh-------------------cCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHH------HHHHHHHHH
Confidence 9999999887 557889999999999999999999999999999988 999999999
Q ss_pred HHHHHhHHHhhhhhhheec------cccchhhhhHHHHHHHHHHHHHHhc
Q 008355 187 LSINIGALVASSVLVWIQM------NVGWGWGFGIPAVAMAIAVVFFFSG 230 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~------~~g~~~~f~~~~~~~~~~~~~~~~~ 230 (568)
.+.++|..++|.+++++.+ ..|||+.|++.++..++..++..+.
T Consensus 139 ~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 139 IAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFW 188 (412)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999988753 4699999999776655544444333
No 41
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.91 E-value=2.6e-23 Score=213.47 Aligned_cols=169 Identities=19% Similarity=0.345 Sum_probs=147.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 008355 35 LGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLT 114 (568)
Q Consensus 35 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~ 114 (568)
++..++..+......+.++.++.+++|.+..+.+++.+++.+...++.++.|+++||+ |||+++.++.++.+++..+..
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~ 80 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRF-GRRRVLIIGLLLFALGSLLLA 80 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS--HHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCeeeEeehhhhhhhHHHHhh
Confidence 4566777777777777777688899999999999999999999999999999999999 999999999999999866666
Q ss_pred HhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHH
Q 008355 115 LTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGAL 194 (568)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 194 (568)
++ .+.+.+++.|++.|++.+...+...+++.|++|+++ |++++++.+...++|..
T Consensus 81 ~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------~~~~~~~~~~~~~~g~~ 135 (352)
T PF07690_consen 81 FA-------------------SNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEE------RGRAFGILSAGFSLGSI 135 (352)
T ss_dssp HH-------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCC------HHHHHHHHHHHHHHHHH
T ss_pred hh-------------------hhHHHHhhhccccccccccccccccccccccchhhh------hhhccccccchhhhhhh
Confidence 54 235589999999999999999999999999999988 99999999999999999
Q ss_pred HhhhhhhheeccccchhhhhHHHHHHHHHHHHHHh
Q 008355 195 VASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 195 ~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~ 229 (568)
++|.+++.+.+.++|++.|++.++..++..++...
T Consensus 136 ~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~ 170 (352)
T PF07690_consen 136 LGPLLGGFLISYFGWRWAFLISAILSLIAAILFIL 170 (352)
T ss_dssp HHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHC
T ss_pred cccchhhhhhhccccccccccccchhhhhhhhHhh
Confidence 99999999999999999999988877777654333
No 42
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.91 E-value=8.1e-23 Score=216.25 Aligned_cols=166 Identities=14% Similarity=0.192 Sum_probs=145.7
Q ss_pred CcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHH
Q 008355 27 NWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIY 106 (568)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~ 106 (568)
+++.+....+..+.+.+..+.. .+..+++++++|.|..+.+++.+++.++..++.++.|+++||+ |||+++.++.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~-g~r~~l~~~~~~~ 93 (426)
T PRK12307 16 QKNALFSAWLGYVFDGFDFMLI-FYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKF-GRKPLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHHHHHhHHHHH-HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 3555666667777777766655 4444567789999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY 186 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (568)
+++.++++++ .+.+.++++|+++|++.|...+....++.|.+|+++ |+++.++.+
T Consensus 94 ~~~~~~~~~~-------------------~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~------r~~~~~~~~ 148 (426)
T PRK12307 94 SVGTGLSGLA-------------------SGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHL------KSKASAFLV 148 (426)
T ss_pred HHHHHHHHHH-------------------hHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhH------hhHhhhHHH
Confidence 9999988887 458889999999999999999999999999999988 999999999
Q ss_pred HHHHHhHHHhhhhhhheeccccchhhhhHHHHH
Q 008355 187 LSINIGALVASSVLVWIQMNVGWGWGFGIPAVA 219 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~ 219 (568)
.+..+|..++|.+.+.+.+.+|||+.|++.++.
T Consensus 149 ~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~ 181 (426)
T PRK12307 149 SGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLP 181 (426)
T ss_pred HHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHH
Confidence 999999999999999998889999999875543
No 43
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.91 E-value=1.8e-22 Score=217.19 Aligned_cols=404 Identities=14% Similarity=0.097 Sum_probs=239.1
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGM 110 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 110 (568)
+..+++..++..+........+| ++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+.+.++.++.+++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~ 81 (485)
T TIGR00711 4 TIVLMLGTFMAVLDSTIVNVAIP-TIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRF-GTRRLFLISTFAFTLGS 81 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHh-CcHHHHHHHHHHHHHHH
Confidence 34455556666665554444444 56678999999999999999999999999999999999 99999999999999999
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHH
Q 008355 111 TLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSIN 190 (568)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 190 (568)
++++.+ ++...++++|+++|++.+...+...+++.|.+|+++ |++++++++....
T Consensus 82 ~~~~~~-------------------~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~ 136 (485)
T TIGR00711 82 LLCGVA-------------------PNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEK------RGRAMAIWGLTVL 136 (485)
T ss_pred HHHhCc-------------------CCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHH------HHHHHHHHHHHHH
Confidence 988876 468889999999999999999999999999999888 9999999999999
Q ss_pred HhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhc--ccccCCcchh
Q 008355 191 IGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKS--NVVVPADKSL 268 (568)
Q Consensus 191 ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 268 (568)
+|..++|.+++++.+++||++.|++.++..++..+......++.++++.++ . +..+......... .....+.++.
T Consensus 137 ~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-d~~g~~l~~~~~~~~~~~~~~~~~~ 213 (485)
T TIGR00711 137 VAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAASEN--F-DFLGLLLLSVGLGSLLYGLSEGPER 213 (485)
T ss_pred HHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccccCC--C-cHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 999999999999999999999999887666555554444333322111111 1 1111110000000 0000000000
Q ss_pred hhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhcccc
Q 008355 269 LYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMS 348 (568)
Q Consensus 269 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (568)
-+..++....... . ...... ...... .. .+.|..+. +..++++.....+........++......+
T Consensus 214 ~~~~~~~~~~~~~-----~-~~~~~~--~~~~~~-~~---~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 279 (485)
T TIGR00711 214 GWFDSNEILILSI-----T-GLVAII--AFVVWE-LT---DDNPLVDL--RLFKYRNFTIGCVYMSLLGLGLYGSFYLLP 279 (485)
T ss_pred CCCCchHHHHHHH-----H-HHHHHH--HHHHHH-Hc---CCCCccCH--HHHcCCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000000000 0 000000 000000 00 01111000 000111111111111111111111111111
Q ss_pred ceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 008355 349 TMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGI 428 (568)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~ 428 (568)
.++ ....+.+. ...+.......+..++..++..+ +.+| .++++.+.++.++.+++.+.+..
T Consensus 280 ~~~-~~~~g~s~-------~~~g~~~~~~~~~~~~~~~~~g~----l~~r-------~~~~~~~~~g~~~~~~~~~~~~~ 340 (485)
T TIGR00711 280 LYL-QQVLGYTA-------LQAGLHILPVGLAPMLSSPIAGR----MGDK-------IDPRKLVTIGLILYAVGFYWRAF 340 (485)
T ss_pred HHH-HHhcCCCH-------HHHHHHHHHHHHHHHHHHHHHHH----HHhh-------cCcHHHHHHHHHHHHHHHHHHhc
Confidence 111 11000000 01122223333444445555444 3444 34445677787777777665542
Q ss_pred HHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 008355 429 LEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLV 508 (568)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~ 508 (568)
.. ....+.+..+...++.+++.+...+.......+..|++.||.++|+.++.+.+|+.+|+.+.
T Consensus 341 ~~----------------~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~ 404 (485)
T TIGR00711 341 TF----------------TPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALI 404 (485)
T ss_pred cC----------------CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 11 01124445555677889999988888888888999999999999999999999999999998
Q ss_pred HHhhh
Q 008355 509 TIVTK 513 (568)
Q Consensus 509 ~~i~~ 513 (568)
+.+.+
T Consensus 405 g~~~~ 409 (485)
T TIGR00711 405 TTILT 409 (485)
T ss_pred HHHHH
Confidence 87764
No 44
>PRK03699 putative transporter; Provisional
Probab=99.91 E-value=7.3e-22 Score=206.84 Aligned_cols=174 Identities=9% Similarity=0.104 Sum_probs=145.7
Q ss_pred CCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHH
Q 008355 26 GNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSII 105 (568)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~ 105 (568)
+++|..+..++..++.....+..-..+|. +.+++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~-g~r~~~~~~~~~ 81 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGP-IAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEII-PLKRQLIFGFAL 81 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHH
Confidence 34566667777777776766655555555 6678999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
.+++..++.++ ++.+.+++.|+++|++.|...+...+++.|.+|+++ |+++++..
T Consensus 82 ~~i~~~l~~~~-------------------~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~------r~~~~~~~ 136 (394)
T PRK03699 82 MILAVAGLMFS-------------------HSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQ------RGSRLLFT 136 (394)
T ss_pred HHHHHHHHHHc-------------------chHHHHHHHHHHHHHhhHhhccchhHHhhhhcccch------HHHHHHHH
Confidence 99988888876 457889999999999999999999999999998887 99999998
Q ss_pred HHHHHHhHHHhhhhhhheec-cccchhhhhHHHHHHHHHHHH
Q 008355 186 YLSINIGALVASSVLVWIQM-NVGWGWGFGIPAVAMAIAVVF 226 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~-~~g~~~~f~~~~~~~~~~~~~ 226 (568)
+...++|+.++|.+.+++.. ..|||+.|.+.++..++..++
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~ 178 (394)
T PRK03699 137 DSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFIL 178 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 88889999999998887654 579999998877655544433
No 45
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.91 E-value=1.1e-22 Score=217.69 Aligned_cols=147 Identities=12% Similarity=0.184 Sum_probs=129.3
Q ss_pred HhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchh
Q 008355 59 QLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQT 138 (568)
Q Consensus 59 ~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (568)
++|++..+.|++.+++.+++.++++++|+++||+ |||+++..+.++.+++.+++..+.. .+.
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~-----------------~~~ 131 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKY-VFKWSIGIGMFLSSVISIVIPWAAG-----------------GGI 131 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHh-CcchhhHHHHHHHHHHHHHHHHHHH-----------------cCc
Confidence 6889999999999999999999999999999999 9999999999988888877755421 235
Q ss_pred HHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccc-cchhhhhHHH
Q 008355 139 AVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNV-GWGWGFGIPA 217 (568)
Q Consensus 139 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~-g~~~~f~~~~ 217 (568)
..+++.|+++|++.+...|....+++|++|+++ |+++.++.+.+.++|..++|.+++++.+.+ ||++.|++.+
T Consensus 132 ~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~ 205 (465)
T TIGR00894 132 ALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKE------RSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFG 205 (465)
T ss_pred hHHHHHHHHHHHhcccchhhHHHHHHhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhh
Confidence 678999999999999999999999999999998 999999999999999999999999998884 9999999887
Q ss_pred HHHHHHHHHHHh
Q 008355 218 VAMAIAVVFFFS 229 (568)
Q Consensus 218 ~~~~~~~~~~~~ 229 (568)
+..++..+..+.
T Consensus 206 ~~~~~~~~~~~~ 217 (465)
T TIGR00894 206 IVGCAWSLLWFV 217 (465)
T ss_pred HHHHHHHHHHHH
Confidence 765555444433
No 46
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.91 E-value=4.9e-22 Score=207.24 Aligned_cols=172 Identities=10% Similarity=0.123 Sum_probs=151.3
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
+.++.+....++.....+...+.+|. +++++|.+..+.|+..+.+.++..++.++.|+++||+ |||+++.++.++.++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~ 80 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTE-LAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRY-SLKHILLFLVALCVI 80 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHH-HHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHH
Confidence 45677777788888887777777765 5678999999999999999999999999999999999 999999999999999
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
+.++++++ ++.+.+++.|++.|++.+...+....++.|++|+++ |+++++++..+
T Consensus 81 ~~~l~~~~-------------------~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 135 (382)
T PRK10091 81 GNAMFTLS-------------------SSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGK------VTAAVAGMVSG 135 (382)
T ss_pred HHHHHHHh-------------------CcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHH------hhHHHHHHHHH
Confidence 99988887 568889999999999999888888888999998877 99999999999
Q ss_pred HHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHH
Q 008355 189 INIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFF 227 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~ 227 (568)
..+|..++|.+++++.+.+|||+.|++.++..++..+..
T Consensus 136 ~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 174 (382)
T PRK10091 136 MTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASI 174 (382)
T ss_pred HHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998999999998877655554433
No 47
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.91 E-value=4.8e-22 Score=207.27 Aligned_cols=157 Identities=11% Similarity=0.059 Sum_probs=140.4
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.|.++.+++..++..+....+.+.+|.|++ ++|.|..++|++.+.+.++..++.++.|+++||+ |||+++..+.++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~-~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~-g~k~~~~~~~~~~~ 82 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLA-QEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRI-GFNRSYYLASLIFA 82 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHH
Confidence 456889999999999999888899998876 5899999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++...++++ ++.+.+++.|+++|++.+...|...+.+.+..++++ |++++++++.
T Consensus 83 ~~~~~~~~~-------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 137 (381)
T PRK03633 83 AGCAGLGLM-------------------VGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRN------RGRLLAAYMM 137 (381)
T ss_pred HHHHHHHHh-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHH
Confidence 998888877 458889999999999999988888888888888877 9999999999
Q ss_pred HHHHhHHHhhhhhhheeccccchh
Q 008355 188 SINIGALVASSVLVWIQMNVGWGW 211 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~~ 211 (568)
+.++|..+||.+++.+.+...+..
T Consensus 138 ~~~~g~~~g~~~~~~l~~~~~~~~ 161 (381)
T PRK03633 138 VYYLGTVLGQLLVSKVSTELMSVL 161 (381)
T ss_pred HHHHHHHHHHHHHhcccccccchH
Confidence 999999999999998877644433
No 48
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.2e-22 Score=211.04 Aligned_cols=395 Identities=11% Similarity=0.087 Sum_probs=246.8
Q ss_pred hhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHH
Q 008355 68 SNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYL 147 (568)
Q Consensus 68 g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 147 (568)
+.+++++.++++++...+|+++||+ |||..+.+..++..++.+++.++... ....+++++|++
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~-GRK~~l~~~~~l~~~~~~~~~~s~~~----------------~~~e~li~GR~i 125 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRF-GRKNALLLSNLLAVLAALLMGLSKSA----------------PSFEMLILGRLI 125 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-cchHHHHHHHHHHHHHHHHHHHHHHh----------------hhHHHHHHHHHH
Confidence 5567789999999999999999999 99999999999888888887776443 348899999999
Q ss_pred HHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhh--heeccccchhhhhHHHHHHHHHHH
Q 008355 148 IALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLV--WIQMNVGWGWGFGIPAVAMAIAVV 225 (568)
Q Consensus 148 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~--~i~~~~g~~~~f~~~~~~~~~~~~ 225 (568)
.|+..|......+-++.|..|.+- ||.......++..+|-.++..++. .+.+.-.|++.+....+..++.++
T Consensus 126 ~Gl~~gl~~~~~pmyl~E~sP~~~------RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~ 199 (485)
T KOG0569|consen 126 VGLACGLSTGLVPMYLTEISPKNL------RGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLA 199 (485)
T ss_pred HHHHhHHHHHHHHHHHhhcChhhh------ccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999 999999999999999999977663 333455699888887776666655
Q ss_pred HHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhh-hhhhhhhhccCccccCCccchhhhhhhh-hccc
Q 008355 226 FFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYE-TADEECNIQGSRKLESTSKFKFFDKAAV-ETQT 303 (568)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~ 303 (568)
+..+ +||+|+++.. ++++|++++.+++.+..+...-.+.... ....
T Consensus 200 ~l~~--------------------------------~PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e~~~~e~~~ 247 (485)
T KOG0569|consen 200 LLPF--------------------------------LPESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIEEMLREIEE 247 (485)
T ss_pred HHhc--------------------------------CCCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHHHHHHHHHH
Confidence 5433 6788888877 6778877776665543332221111110 0001
Q ss_pred cccCC-CCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhccccceeEeecccccCCCCCCcccCchhhccc-cchhh
Q 008355 304 DRVKG-SADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMSTMFVLQGNTMDQHMGPNFKIPSASLSLF-DTLSV 381 (568)
Q Consensus 304 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 381 (568)
.+.++ ++..+++..+++ ..++.+...+.+..++.+........++. ..-.+. |++...+...+. .....
T Consensus 248 ~~~~~~~~~sl~~~~~~~-~lR~~~~i~~~v~~~qq~sGi~ai~~Yst------~i~~~a--G~~~~~a~~an~~~g~v~ 318 (485)
T KOG0569|consen 248 EELEKKKQISLRQLLKNP-TLRRPLLIGIVVSFAQQFSGINAIFFYST------SIFKTA--GFTPEEAQYANLGIGIVN 318 (485)
T ss_pred hccccccCCcHHHHhcCc-chhHHHHHHHHHHHHHHhcCcceeHHHHH------HHHHHc--CCCHHHHHHHHHHHHHHH
Confidence 10000 112222211111 11222222222222222111111111111 111111 111111111111 11222
Q ss_pred hhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHH
Q 008355 382 IFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFI 461 (568)
Q Consensus 382 i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 461 (568)
++....... +.+|.+|| ..++.++.++.+..+++......... ..+.-.+..+...++
T Consensus 319 ~~~t~~~~~----lid~~gRR-------pLll~~~~~~~~~~~~~~~~~~l~~~-----------~~~~~~y~~i~~~~~ 376 (485)
T KOG0569|consen 319 LLSTLVSPF----LIDRLGRR-------PLLLISLSLMAVALLLMSIALFLSNS-----------FGSWLSYLCIAAIFL 376 (485)
T ss_pred HHHHHHHHH----HHHhcCCc-------HHHHHHHHHHHHHHHHHHHHHHHHHH-----------hhhHHHHHHHHHHHH
Confidence 222222222 45554444 46777877777776665554422000 000011122334444
Q ss_pred HHHHHHH-HhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHH
Q 008355 462 VGCAEVF-TFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLL 540 (568)
Q Consensus 462 ~g~~~~~-~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~ 540 (568)
+.+...+ ..|..+-+.+|++|++.|+.++++....+++.+.+-....+.+.+..+ + .+|+.+
T Consensus 377 ~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g-----~------------~~filF 439 (485)
T KOG0569|consen 377 FIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIG-----P------------YVFILF 439 (485)
T ss_pred HHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----c------------hhhHHH
Confidence 4444333 468999999999999999999999999999999888777777655442 1 468888
Q ss_pred HHHHHHHHHHHHHHhhhceeccccc
Q 008355 541 TILSVLNFLVYLWIAKWFTYKKATG 565 (568)
Q Consensus 541 a~~~~v~~v~~~~~~~~~~~~~~~~ 565 (568)
++.+++..+..+...||+|+|+.+|
T Consensus 440 ~i~~~~~~i~~~~~lPETkgr~~~e 464 (485)
T KOG0569|consen 440 VIPLAIFLIYLYRYLPETKGRTPYE 464 (485)
T ss_pred HHHHHHHHHHHHHhCcccCCCCHHH
Confidence 9999999999999999999987543
No 49
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.90 E-value=8.4e-22 Score=206.14 Aligned_cols=165 Identities=13% Similarity=0.073 Sum_probs=138.1
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
|+.+.++...++..++.......++.. .+++|.+..+.+++.+.+.+...++.++.|+++||+ |||+++..+.+++++
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~-grr~vl~~~~~~~~~ 80 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIAL-LKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSF-PKGRVMFIANGIKLL 80 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhcc-CCchhhHHHHHHHHH
Confidence 456677788888887666555555554 578999999999999999999999999999999999 999999999999988
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
+.+.+..+ .+ .++.|+++|++.+...|+..+++.|++|+++ |+++.++.+..
T Consensus 81 ~~~~~~~~-------------------~~---~~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~------~~~a~~~~~~~ 132 (393)
T PRK11195 81 GCLLMLFG-------------------IH---PLLAYGLVGIGAAAYSPAKYGILTELLPGEK------LVKANGWMEGS 132 (393)
T ss_pred HHHHHHHH-------------------HH---HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHH
Confidence 88777665 12 2778999999999999999999999999988 99999999999
Q ss_pred HHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHH
Q 008355 189 INIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAV 224 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~ 224 (568)
.++|..+||.++|++.+. .|+..+++.+...+++.
T Consensus 133 ~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~ 167 (393)
T PRK11195 133 TIAAILLGTVLGGALADP-HAEAALAVCALIYLLAA 167 (393)
T ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 999999999999998874 47777666554444343
No 50
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.90 E-value=3.4e-22 Score=214.19 Aligned_cols=174 Identities=11% Similarity=0.094 Sum_probs=132.8
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
++.+.......++.....+...+.++ ++.+++|++..+.+++.+.+.+++.++.+++|+++||+ |||+++..+.++++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-G~r~~~~~~~~~~~ 112 (476)
T PLN00028 35 MRAFHLSWISFFTCFVSTFAAAPLLP-IIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLY-GPRYGSAFLLMLTA 112 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHH
Confidence 34444444445555555555444444 67789999999999999999999999999999999999 99999999999988
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++.++++++ .+...+++.|+++|++.+... ....+++|++|+++ |++++++.+.
T Consensus 113 ~~~~~~~~~-------------------~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~------rg~a~g~~~~ 166 (476)
T PLN00028 113 PAVFCMSLV-------------------SSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKI------VGTANGIAAG 166 (476)
T ss_pred HHHHHHHHh-------------------cCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhh------eeHHHHHHHH
Confidence 888888877 457778899999999988654 35567899999988 9999999887
Q ss_pred HHHHhHHHhhhhhhhee----c-----cccchhhhhHHHHHHHHHHHHHHh
Q 008355 188 SINIGALVASSVLVWIQ----M-----NVGWGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~----~-----~~g~~~~f~~~~~~~~~~~~~~~~ 229 (568)
..++|..+++.+.+.+. + ..|||+.|++.++..++..+..++
T Consensus 167 ~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~ 217 (476)
T PLN00028 167 WGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLT 217 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 77777777766554432 1 258999999887766555444333
No 51
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.90 E-value=7.6e-22 Score=202.00 Aligned_cols=346 Identities=19% Similarity=0.270 Sum_probs=252.2
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHH
Q 008355 32 RFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMT 111 (568)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~ 111 (568)
+.+....+.....++...+.++.|.+ ++|.+..+.+++.+...+...++.++.|+++||+ |||+.+..+.+...++..
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~-g~r~~~~~~~~~~~~~~~ 79 (352)
T cd06174 2 LLLFLGFFLSGLDRGLLSPALPLLAE-DLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRF-GRRRVLLLGLLLFALGSL 79 (352)
T ss_pred HHHHHHHHHHHHhhhhhHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CCchhhHHHHHHHHHHHH
Confidence 44566777888888888888888765 5799999999999999999999999999999999 999999999999999998
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHH
Q 008355 112 LLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINI 191 (568)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 191 (568)
.+... ++.+.+++.|++.|++.+...+...+++.|.+|+++ |++.+++.+...++
T Consensus 80 ~~~~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 134 (352)
T cd06174 80 LLAFA-------------------SSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKE------RGRALGLFSAGFGL 134 (352)
T ss_pred HHHHh-------------------ccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccc------hhhhhhHHHHHHHH
Confidence 88876 458889999999999999999999999999999988 99999999999999
Q ss_pred hHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhh
Q 008355 192 GALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYE 271 (568)
Q Consensus 192 g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 271 (568)
|..++|.+++.+.+..+|++.|++.++..++..+.....+ +
T Consensus 135 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~-------------------------- 175 (352)
T cd06174 135 GALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-------------R-------------------------- 175 (352)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH-------------H--------------------------
Confidence 9999999999999988999999988776665554433221 0
Q ss_pred hhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHh-hhHHHhhhccccce
Q 008355 272 TADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWAS-GIVFATVYSQMSTM 350 (568)
Q Consensus 272 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 350 (568)
+.......... ...........+.+
T Consensus 176 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (352)
T cd06174 176 ------------------------------------------------------LLLLLALAFFLLSFGYYGLLTYLPLY 201 (352)
T ss_pred ------------------------------------------------------HHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 00000000000 11111111111111
Q ss_pred eEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchH-HHHHHHHHHHHHHHHHHHH
Q 008355 351 FVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQ-RMGIGLLISIFSMVAAGIL 429 (568)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~-~~~~g~~l~~~~~~~~~~~ 429 (568)
. .+.. + ......+.......+..++..++..+ +.+|.++| + .+..+.++..++.+.....
T Consensus 202 ~-~~~~------~-~~~~~~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~-------~~~~~~~~~~~~i~~~~~~~~ 262 (352)
T cd06174 202 L-QEVL------G-LSAAEAGLLLSLFGLGGILGALLGGL----LSDRLGRR-------RLLLLIGLLLAALGLLLLALA 262 (352)
T ss_pred H-HHhc------C-CCHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhh-------hHHHHHHHHHHHHHHHHHHHh
Confidence 1 1000 0 00011223334444445555555544 44553332 3 5667777777777766544
Q ss_pred HHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008355 430 EVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVT 509 (568)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~ 509 (568)
+ +.+.......+.+++.+...+....+..|..|++.|++.+|+.+....++..+++.+.+
T Consensus 263 ~--------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g 322 (352)
T cd06174 263 P--------------------SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAG 322 (352)
T ss_pred c--------------------cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 35566777888999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHH
Q 008355 510 IVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYL 552 (568)
Q Consensus 510 ~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~ 552 (568)
.+.+.. +| ...|++.+++++++.+..+
T Consensus 323 ~l~~~~------~~----------~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 323 LLLDTG------GY----------GGVFLILAALALLAALLLL 349 (352)
T ss_pred HHhccc------Cc----------chHHHHHHHHHHHHHHHhe
Confidence 876522 22 3467777777777766543
No 52
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.90 E-value=1.5e-21 Score=203.36 Aligned_cols=175 Identities=14% Similarity=0.103 Sum_probs=147.2
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
++.++.+.+..+....+.....+.+| ++.+++|.|..+.+++.+.+.++..++.++.|+++||+ |||+++..+.++.+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-g~r~~~~~~~~~~~ 81 (385)
T TIGR00710 4 KAFALLLGCLSILGPLGIDMYLPAFP-EIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRY-GRRPVLLLGLFIFA 81 (385)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHHH
Confidence 34344444445555555555555555 46778999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++.+++..+ ++.+.+++.|++.|++.+...+...+++.|.+|+++ |++++++.+.
T Consensus 82 ~~~~~~~~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 136 (385)
T TIGR00710 82 LSSLGLALS-------------------NNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEE------LSRIYSILMP 136 (385)
T ss_pred HHHHHHHHH-------------------ccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHH------HHHHHHHHHH
Confidence 988888877 457889999999999999999999999999999888 9999999999
Q ss_pred HHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHh
Q 008355 188 SINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~ 229 (568)
..++|..++|.+++++.+.++|++.|++.++..++..+....
T Consensus 137 ~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (385)
T TIGR00710 137 VLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFF 178 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998899999998877665555544443
No 53
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.90 E-value=2.3e-21 Score=203.64 Aligned_cols=171 Identities=14% Similarity=0.071 Sum_probs=143.4
Q ss_pred CCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHH
Q 008355 26 GNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSII 105 (568)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~ 105 (568)
..+|++....++.++.....+....++++++ +++|.+..+.|+..+.+.++..++.++.|+++||+ ||||++..+.++
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~-g~k~~l~~~~~~ 87 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFL-KALGLSPQQSASAFTLYGIAAAISAWISGVVAEII-GPLKTMMIGLLL 87 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHH-HHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHH
Confidence 4477888888999998888888888888888 56899999999999999999999999999999999 999999999998
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
.+++.+++..... . ..+.+.+++.|++.|+|.+...+...+.+.+.+|+++ |+++++++
T Consensus 88 ~~~~~~~~~~~~~-~--------------~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~------~g~~~g~~ 146 (402)
T TIGR00897 88 WCVGHAAFIVFGL-G--------------HANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN------LSSAVGWF 146 (402)
T ss_pred HHHHHHHHHHHhc-c--------------CccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH------HHHHHHHH
Confidence 8888765532210 0 0356778889999999998887778888889999888 99999999
Q ss_pred HHHHHHhH-HHhhhhhhheeccccchhhhhHHHHH
Q 008355 186 YLSINIGA-LVASSVLVWIQMNVGWGWGFGIPAVA 219 (568)
Q Consensus 186 ~~~~~ig~-~~~p~~~~~i~~~~g~~~~f~~~~~~ 219 (568)
+.+.++|. .++|.+++++.+.+||+..++.....
T Consensus 147 ~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~ 181 (402)
T TIGR00897 147 WAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAF 181 (402)
T ss_pred HHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHH
Confidence 99999996 68999999998888977666654433
No 54
>TIGR00895 2A0115 benzoate transport.
Probab=99.90 E-value=6.6e-22 Score=206.51 Aligned_cols=172 Identities=16% Similarity=0.194 Sum_probs=143.7
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
++.+...++..+.....++... ...+++.+++|.+..+.+++.+.+.++..++.++.|+++||+ |||+.+..+.++..
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~ 93 (398)
T TIGR00895 16 WRAIILSFLIMLMDGYDLAAMG-FAAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRI-GRKRVLLWSILLFS 93 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-hhHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHh-hhHHHHHHHHHHHH
Confidence 4544555555555555554444 444566778999999999999999999999999999999999 99999999998888
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++.+++... .+.+.+++.|++.|++.+...+...+++.|.+|+++ |++++++.+.
T Consensus 94 ~~~~~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~ 148 (398)
T TIGR00895 94 VFTLLCALA-------------------TNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRF------RGTAVGLMFC 148 (398)
T ss_pred HHHHHHHHc-------------------cchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHh------hchhHhhHhh
Confidence 888887766 457788999999999999999999999999999888 9999999999
Q ss_pred HHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHH
Q 008355 188 SINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVF 226 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~ 226 (568)
+.++|..++|.+++++.+..||++.|++.++..++..++
T Consensus 149 ~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 187 (398)
T TIGR00895 149 GYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLL 187 (398)
T ss_pred HHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHH
Confidence 999999999999999999999999999876444444333
No 55
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.90 E-value=1.6e-21 Score=204.19 Aligned_cols=175 Identities=11% Similarity=0.095 Sum_probs=129.2
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHH-hhhhhHHHHhhhccCchHHHH-HHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCY-ITPLIGAFLADSYMGRFWTIA-SFSII 105 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~-i~~~~~G~laDr~~Grk~~~~-~~~~~ 105 (568)
.+..+..+...++.+++.....+.++.|+++++|.|..++|+..+...+... +.++++|+ +||+ ||||.++ .+.+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~-g~r~~~~~~~~~~ 91 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKR-GDRKSLIVFCCLL 91 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-cchhHHHHHHHHH
Confidence 3445777888999999999999999999999999999999999877655444 55555566 9999 9988754 44555
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhh--hhhhh
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKK--SSFFN 183 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r--~~~~~ 183 (568)
.+++.++.+++ .+.+.+++.+.+.+...+...|....+..|..++++ | +...+
T Consensus 92 ~~~~~~~~~~~-------------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 146 (393)
T PRK15011 92 GVLACTLFAWN-------------------RNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTG------REAVMFSS 146 (393)
T ss_pred HHHHHHHHHHh-------------------hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhcc------chHHHHHH
Confidence 55666666665 345555544444443344667777787788766554 4 34457
Q ss_pred hHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHh
Q 008355 184 WFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 184 ~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~ 229 (568)
+.+.+.++|..++|.+++++.+.+|||..|++.++..++..+....
T Consensus 147 ~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 192 (393)
T PRK15011 147 FLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWL 192 (393)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHh
Confidence 8888999999999999999999899999999887665555444443
No 56
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.90 E-value=2.3e-22 Score=214.34 Aligned_cols=151 Identities=13% Similarity=0.062 Sum_probs=127.6
Q ss_pred HHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCC
Q 008355 54 NYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHP 133 (568)
Q Consensus 54 ~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (568)
..+.+++|.+..+.+++.+.+.+...++.++.|+++||+ |||++++.+.++..+++++++++
T Consensus 43 ~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~----------------- 104 (455)
T TIGR00892 43 KELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRF-GCRPVVIAGGLLASLGMILASFS----------------- 104 (455)
T ss_pred HHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc-CchHHHHhhHHHHHHHHHHHHHh-----------------
Confidence 345678999999999999999999999999999999999 99999999999999888888877
Q ss_pred CCchhHHHHH-HHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccccchhh
Q 008355 134 TGAQTAVTFV-ALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVGWGWG 212 (568)
Q Consensus 134 ~~~~~~~~~~-~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~ 212 (568)
.+.+.+++ .|++.|++.+...+...+++.++++ ++ |+++.++.+.+.++|..++|.+++.+.+.+|||++
T Consensus 105 --~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~ 175 (455)
T TIGR00892 105 --SNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RR------RPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGS 175 (455)
T ss_pred --hhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hh------HHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHH
Confidence 34666654 4688899998776677788889885 56 99999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhcC
Q 008355 213 FGIPAVAMAIAVVFFFSGS 231 (568)
Q Consensus 213 f~~~~~~~~~~~~~~~~~~ 231 (568)
|++.++..+++.+..++.+
T Consensus 176 f~~~~~~~~~~~v~~~~~~ 194 (455)
T TIGR00892 176 FLILGGLLLHCCVCGALMR 194 (455)
T ss_pred HHHHHHHHHHHHHHHHHhC
Confidence 9998876665554444443
No 57
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.90 E-value=9e-22 Score=207.94 Aligned_cols=397 Identities=8% Similarity=-0.047 Sum_probs=227.4
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.+..+.+.+..++..++++...++++.|+++++|+|..++|++.+.+.++..+++++.|+++||+ |||+++.++..+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~-g~r~~~~~~~~~~~ 87 (420)
T PRK09528 9 NPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKL-GLKKHLLWIISGLL 87 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHH
Confidence 34567777888888888888999999999999999999999999999999999999999999999 99999988766555
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++..........+. -......+..+.++..+...+...+.+.++.+...+ .++..++..+.
T Consensus 88 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~g~~~~ 148 (420)
T PRK09528 88 VLFGPFFIYVFAPL---------------LQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSR----RSGFEYGRARM 148 (420)
T ss_pred HHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHh----hccccchhhHH
Confidence 44332211100000 000011222223333333333333333444332111 16778888888
Q ss_pred HHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcch
Q 008355 188 SINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKS 267 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (568)
..++|..++|.+++++.+ .+|+++|++.++..++.+++.+..+++.++++...++
T Consensus 149 ~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 203 (420)
T PRK09528 149 WGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDAPSTAKVANA------------------------ 203 (420)
T ss_pred hhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccccchhhhccc------------------------
Confidence 899999999999998876 5899999887766655555544433321110000000
Q ss_pred hhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhh-hHHHhhhcc
Q 008355 268 LLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASG-IVFATVYSQ 346 (568)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 346 (568)
++.. .++..+.+.... .++ +++.......... ..+.....+
T Consensus 204 --------~~~~--------~~~~~~~~~~~~---------------------l~~-~~~~~l~l~~~~~~~~~~~~~~~ 245 (420)
T PRK09528 204 --------LGAN--------ASAVSLKDALAL---------------------LKL-PKFWFLVLYVIGVACFYDVFDQQ 245 (420)
T ss_pred --------hhcc--------cccccHHHHHHH---------------------ccC-CCeEeehHHHHHHHHHHHHHHHH
Confidence 0000 000000000000 000 0000011111111 111112222
Q ss_pred ccceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHH
Q 008355 347 MSTMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAA 426 (568)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 426 (568)
.+.++..... +.... ....+.+.....+...+..++.++ +.+|.++ ++.+..+.++.+++.+..
T Consensus 246 ~~~~~~~~~~--~~~~~---~~~~g~~~~~~~~~~~~~~~~~g~----l~dr~g~-------~~~~~~~~~l~~~~~~l~ 309 (420)
T PRK09528 246 FPNFFASFFA--TPEQG---TRVFGYLNSFQVFLEALIMFFAPF----IINRIGA-------KNALLLAGTIMAVRIIGS 309 (420)
T ss_pred HHHHHHHHHh--ccCcc---hHHHHHHHHHHHHHHHHHHHHHHH----HHHHhCc-------chhhHHHHHHHHHHHHHH
Confidence 2222211100 00100 001122233333333344444444 5555433 345666777777766665
Q ss_pred HHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHH-HHHHHHHHHHHHH
Q 008355 427 GILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSAL-SLTTVAVGNYLST 505 (568)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~lg~~lg~ 505 (568)
+..+ +.++++....+.+++.....+....++.+..|++.+++..+. +++...+|+.+++
T Consensus 310 ~~~~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~ 369 (420)
T PRK09528 310 GFAT--------------------GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLS 369 (420)
T ss_pred Hhcc--------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHH
Confidence 5432 445555666777787777777788999999999999988766 6788899999999
Q ss_pred HHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhce
Q 008355 506 LLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFT 559 (568)
Q Consensus 506 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~ 559 (568)
.+.|.+.+.. || +..|...+++.++..++.++..++.+
T Consensus 370 ~~~G~l~~~~------G~----------~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 370 TLAGNLYDSI------GF----------QGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred HHHHHHHHhh------Cc----------hHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999887643 23 45677778888777766666555433
No 58
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.90 E-value=4e-21 Score=200.40 Aligned_cols=366 Identities=11% Similarity=0.022 Sum_probs=229.1
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH-H
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC-L 108 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~-i 108 (568)
..+.+.+..+....++-...+++|.|++ ++|+|..++|++.+++.+...+++++.|.++||+ ||+........... +
T Consensus 5 ~~~~l~~~~~~~~~~~~~~~p~l~~~l~-~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~l 82 (382)
T TIGR00902 5 PFRWLALGFFGYFCAYGIFLPFFPAWLK-GIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDA-NHIIIALRLLALASAI 82 (382)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CcHHHHHHHHHHHHHH
Confidence 3445666677777777778889999985 6899999999999999999999999999999999 98543322211111 1
Q ss_pred HHH-HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 109 GMT-LLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 109 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
..+ ++..+ ++.+.+++.|++++.+.+...|...++..+. +++ |++.++....
T Consensus 83 ~~~~~~~~~-------------------~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~------~~~~~g~~~~ 135 (382)
T TIGR00902 83 FAAAFSAGA-------------------HNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQ------FGLDYGKVRL 135 (382)
T ss_pred HHHHHHHhh-------------------hhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHH------cCCCccHHHH
Confidence 111 22223 4578888999999999888888888876553 344 8999999999
Q ss_pred HHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcch
Q 008355 188 SINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKS 267 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (568)
..++|..++|.+++++.+.+||+..|++.+...++.++ .+..+++. ++++++.+
T Consensus 136 ~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~---------------------- 189 (382)
T TIGR00902 136 IGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAFMLI-GFLIKPTI---PPKDAIPE---------------------- 189 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHcCCCC---CCCccccc----------------------
Confidence 99999999999999999999999998876554333222 22222211 01000000
Q ss_pred hhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHH-HHHHHhhhHHHhhhcc
Q 008355 268 LLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRL-LPVWASGIVFATVYSQ 346 (568)
Q Consensus 268 ~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 346 (568)
++ ..... .++ +-.++ ++.... ....+........+..
T Consensus 190 -------~~----------~~~~~--------------------~~~----~~l~~-~~~~~~l~~~~l~~~~~~~~~~~ 227 (382)
T TIGR00902 190 -------DE----------SQGDS--------------------AFI----ALLKN-PMNLRFLAAVCLIQGAHAAYYGF 227 (382)
T ss_pred -------cc----------cccch--------------------hHH----HHHcC-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00000 000 00011 122111 1111222222222222
Q ss_pred ccceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHH
Q 008355 347 MSTMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAA 426 (568)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~ 426 (568)
.+.++ .. .+.+.. ..+.+.....+..++...+.+ ++.+| .++++.+.++.++.++.....
T Consensus 228 ~~~~l-~~-~g~s~~-------~~g~l~~~~~~~~i~~~~~~~----~l~~r-------~g~~~~l~~~~~~~~~~~~~~ 287 (382)
T TIGR00902 228 SAIYW-QA-AGISAS-------ATGLLWGIGVLAEIIIFAFSN----KLFQN-------CSARDLLLISAIACVGRWAII 287 (382)
T ss_pred HHHHH-HH-CCCCHh-------HHHHHHHHHHHHHHHHHHHhH----HHHhh-------CCHHHHHHHHHHHHHHHHHHH
Confidence 21111 11 111110 111122222222222222222 23444 566677888999998888777
Q ss_pred HHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHH-HHHHHHHHHHH
Q 008355 427 GILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSL-TTVAVGNYLST 505 (568)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~lg~~lg~ 505 (568)
...+ +.+.++....+.++..+...+....++.+. |++.|++++++++ ...++|..+|+
T Consensus 288 ~~~~--------------------~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~ 346 (382)
T TIGR00902 288 GAIE--------------------AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFT 346 (382)
T ss_pred HhHh--------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 6544 556666677999999999999999999998 9999999999987 56789999999
Q ss_pred HHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHH
Q 008355 506 LLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLV 550 (568)
Q Consensus 506 ~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~ 550 (568)
.++|.+.+..+ ...|+..+++++++.++
T Consensus 347 ~~~G~l~~~~g-----------------~~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 347 AFAGFIYPTLG-----------------AGTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHhcc-----------------HHHHHHHHHHHHHHHHH
Confidence 99999876541 13577778887776543
No 59
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.89 E-value=3.4e-21 Score=201.72 Aligned_cols=172 Identities=16% Similarity=0.116 Sum_probs=146.5
Q ss_pred CcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHH
Q 008355 27 NWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIY 106 (568)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~ 106 (568)
.+|.++.+.+..++.........+.+|. +.+++|.|..+.+++.+.+.+...++.++.|+++||+ |||+.+..+.+..
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~-i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-grr~~~~~~~~~~ 83 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIAD-MARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRV-GRRPVILVGMSIF 83 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhc-CChHHHHHHHHHH
Confidence 4666777777777777776666666665 4578999999999999999999999999999999999 9999999999988
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY 186 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (568)
+++.+++..+ ++.+.+++.|++.|++.+...+....+..|.+++++ |+++.++.+
T Consensus 84 ~~~~~~~~~~-------------------~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 138 (394)
T PRK11652 84 ILGTLVALFA-------------------HSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQ------LRHANSLLN 138 (394)
T ss_pred HHHHHHHHHH-------------------ccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHH------HHHHHHHHH
Confidence 8888887776 457889999999999998887888888889888777 999999999
Q ss_pred HHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHH
Q 008355 187 LSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVV 225 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~ 225 (568)
.+..+|..++|.+++++.+..||++.|++.++..++..+
T Consensus 139 ~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~ 177 (394)
T PRK11652 139 MGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTF 177 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH
Confidence 999999999999999998889999999987765544433
No 60
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.89 E-value=1.4e-21 Score=211.46 Aligned_cols=398 Identities=12% Similarity=0.112 Sum_probs=241.2
Q ss_pred hhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHH
Q 008355 66 TASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVAL 145 (568)
Q Consensus 66 ~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (568)
+.+++.++..++..++.++.|+++|++ |||++++++.+++.+|.++++.+ .+...++++|
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~-GRk~~l~~~~~~~~iG~ii~~~a-------------------~~~~~l~~GR 149 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRI-GRKKTLLLAVVLFLIGAIIIALA-------------------PSWYQLIVGR 149 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHh-------------------hhHHHHHHHH
Confidence 348999999999999999999999999 99999999999999999999998 5689999999
Q ss_pred HHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheecc--ccchhhhhHHHHHHHHH
Q 008355 146 YLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMN--VGWGWGFGIPAVAMAIA 223 (568)
Q Consensus 146 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~--~g~~~~f~~~~~~~~~~ 223 (568)
++.|+|.|+....++.+++|..|++. ||...+.++...++|..++.. .+....+ ++||..+.+..+..++.
T Consensus 150 ~l~G~g~G~~~~~~piy~sEiap~~~------RG~l~~~~~l~~~~Gi~~~~~-~~~~~~~~~~~Wr~~~~~~~i~~~~~ 222 (513)
T KOG0254|consen 150 ILTGLGVGGASVLAPVYISEIAPAHI------RGTLVSLYQLFITIGILLGYC-INYGTSKVYAGWRIPLGLALIPAVIL 222 (513)
T ss_pred HHhccchhhhhhcchhhHhhcCChhh------hHHHHHHHHHHHHHHHHHHHH-HhhhhccCCccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 999999999999999999955 4444443 48998888777665555
Q ss_pred HHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhhhhhhhhhhccCccccCC---ccchhhhhhhhh
Q 008355 224 VVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYETADEECNIQGSRKLEST---SKFKFFDKAAVE 300 (568)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~ 300 (568)
.+.+++ +||+|+++.++++.++++...+++... +.....+..+..
T Consensus 223 ~~~~~~--------------------------------~pesp~~L~~~g~~~~a~~~l~~l~g~~~~~~~~~~~~~~~~ 270 (513)
T KOG0254|consen 223 ALGMLF--------------------------------LPESPRWLIEKGRLEEAKRSLKRLRGLSPEDVEVELELLKIK 270 (513)
T ss_pred HHHHHh--------------------------------CCCChHHHHHcCChHHHHHHHHHHhCCCCcchHHHHHHHHHH
Confidence 544332 456777777777766666555444331 111111111100
Q ss_pred ccccccCC-CCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhccccceeEeecccccCCCCCCcccCchhhccccch
Q 008355 301 TQTDRVKG-SADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMSTMFVLQGNTMDQHMGPNFKIPSASLSLFDTL 379 (568)
Q Consensus 301 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (568)
...+.... ....++++.. ....|+......+..++.... ....+.+. ...-... +...+......+...
T Consensus 271 ~~~~~~~~~~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG-----~~~~~~Y~-~~if~~~--g~~~~~~~~~~~~~~ 340 (513)
T KOG0254|consen 271 LLVEAEVAEGKASWGELFS--PKVRKRLIIGLLLQLFQQLTG-----INYVFYYS-TTIFKSA--GLKSDTFLASIILGV 340 (513)
T ss_pred HHHhhhcccccccHHHhcC--cchHHHHHHHHHHHHHHHHhC-----CceEEeeh-HHHHHhc--CCCCchHHHHHHHHH
Confidence 00000000 0111211111 122333332222222222211 11111111 1111111 121111111121112
Q ss_pred hhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHH
Q 008355 380 SVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQY 459 (568)
Q Consensus 380 ~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 459 (568)
..++...+... +.+|.+|| ..+..|...+.+++++++.......+... ......+..+....
T Consensus 341 v~~~~t~~~~~----lvd~~gRr-------~lll~s~~~m~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 402 (513)
T KOG0254|consen 341 VNFLGTLVATY----LVDRFGRR-------KLLLFGAAGMSICLVILAVVGVFALYYPN-------SSKGAGWLAIVFLC 402 (513)
T ss_pred HHHHHHHHHHH----HHHHhccH-------HHHHHhHHHHHHHHHHHHHHHHHhccCCC-------cccchhHHHHHHHH
Confidence 22222222223 34443333 46788888888888877766532110000 00111222233333
Q ss_pred HHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHH
Q 008355 460 FIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWL 539 (568)
Q Consensus 460 ~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 539 (568)
+..........|..|.+..|..|.+.|+.+.++....+++.+.+-............ ....|+.
T Consensus 403 ~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~----------------~~~~f~~ 466 (513)
T KOG0254|consen 403 LFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG----------------IGGTFGY 466 (513)
T ss_pred HHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc----------------ccchHHH
Confidence 344444555567888999999999999999999999998888665554443332110 0124666
Q ss_pred HHHHHHHHHH-HHHHHhhhceecccccC
Q 008355 540 LTILSVLNFL-VYLWIAKWFTYKKATGR 566 (568)
Q Consensus 540 ~a~~~~v~~v-~~~~~~~~~~~~~~~~~ 566 (568)
+++++.+... ..++..||+|+++.||.
T Consensus 467 f~~~~~~~~~~fv~~~~pETkg~sleei 494 (513)
T KOG0254|consen 467 FGGICLLSLIIFVFFFVPETKGLTLEEI 494 (513)
T ss_pred HHHHHHHHHHHHheEEcccCCCCcHHHH
Confidence 7777777766 78888999999987753
No 61
>PRK15075 citrate-proton symporter; Provisional
Probab=99.89 E-value=8.6e-21 Score=201.28 Aligned_cols=172 Identities=14% Similarity=0.106 Sum_probs=127.6
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhH-HHHHH-----HHHhhhhhHHHHhhhccCchHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNV-TNWSG-----TCYITPLIGAFLADSYMGRFWTIAS 101 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~-~~~~~-----~~~i~~~~~G~laDr~~Grk~~~~~ 101 (568)
++....+++..+++.+....+. ...+.+.++++.+..+.+... +...+ ...++.++.|+++||+ |||+.++.
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~-Grr~~l~~ 91 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFG-FYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV-GRRKGLIV 91 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh-chHHHHHH
Confidence 4455666667777776665544 444577888998887765433 22222 2236788999999999 99999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhh
Q 008355 102 FSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSF 181 (568)
Q Consensus 102 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 181 (568)
+.++++++.++++++.+.... .......++++|+++|++.|...+....+++|++|+++ |+++
T Consensus 92 ~~~~~~~~~~l~~~~~~~~~~-----------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~------rg~~ 154 (434)
T PRK15075 92 TLSIMASGTLLIAFVPGYATI-----------GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGR------KGFY 154 (434)
T ss_pred HHHHHHHHHHHHHhCCcHHHH-----------HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCccc------chHH
Confidence 999999999999887221100 00001247899999999999999999999999999998 9999
Q ss_pred hhhHHHHHHHhHHHhhhhhhhe--------eccccchhhhhHHHH
Q 008355 182 FNWFYLSINIGALVASSVLVWI--------QMNVGWGWGFGIPAV 218 (568)
Q Consensus 182 ~~~~~~~~~ig~~~~p~~~~~i--------~~~~g~~~~f~~~~~ 218 (568)
+++.....++|..+++.+++.+ .+.+|||++|++..+
T Consensus 155 ~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 155 TSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 9998888888888887777654 246899999987543
No 62
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.89 E-value=1.7e-21 Score=210.32 Aligned_cols=168 Identities=17% Similarity=0.239 Sum_probs=146.9
Q ss_pred CCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHH
Q 008355 26 GNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSII 105 (568)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~ 105 (568)
.+++.+..+.+..++..+........+ +++.+++|+|..+.++..+.+.++..++.++.|+++||+ |||+++..+.++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~ 94 (496)
T PRK03893 17 AQWKAFSAAWLGYLLDGFDFVLITLVL-TEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRY-GRRLAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 346666677777777777766555544 457788999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
.+++.++++++ .+.+.+++.|++.|++.+...+...+++.|.+|+++ |++++++.
T Consensus 95 ~~~~~~~~~~~-------------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~ 149 (496)
T PRK03893 95 FSVGTLACGFA-------------------PGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHL------RNKASGFL 149 (496)
T ss_pred HHHHHHHHHHH-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHH
Confidence 99998888877 457889999999999999999999999999999988 99999999
Q ss_pred HHHHHHhHHHhhhhhhheeccccchhhhhHHHHHH
Q 008355 186 YLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAM 220 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~ 220 (568)
+.+.++|..++|.+.+.+.+.++|++.|++.++..
T Consensus 150 ~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~ 184 (496)
T PRK03893 150 ISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPI 184 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 99999999999999999999999999998755443
No 63
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.89 E-value=1.4e-21 Score=207.68 Aligned_cols=154 Identities=16% Similarity=0.152 Sum_probs=127.4
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 008355 52 LVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDAC 131 (568)
Q Consensus 52 l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 131 (568)
..+++++ .|++..+.++..+++.++..++.++.|+++||+ |||+.+..+.++.+++..+++...+.
T Consensus 49 ~~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~~~~------------ 114 (438)
T TIGR00712 49 AMPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRS-NPRVFLPAGLILSAAVMLLMGFVPWA------------ 114 (438)
T ss_pred hhHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhcc-CCceehHHHHHHHHHHHHHHhccccc------------
Confidence 3446665 699999999999999999999999999999999 99999999988888887776654211
Q ss_pred CCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhhee-ccccch
Q 008355 132 HPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQ-MNVGWG 210 (568)
Q Consensus 132 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~-~~~g~~ 210 (568)
..+...+++.|++.|++.|...+.....+.|++|+++ |++++++++...++|+.++|.+.+... ...+||
T Consensus 115 ---~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~------rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~ 185 (438)
T TIGR00712 115 ---TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE------RGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWH 185 (438)
T ss_pred ---cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc------chhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhH
Confidence 1346678889999999999999989999999999998 999999999999999999988776544 456899
Q ss_pred hhhhHHHHHHHHHHHHHH
Q 008355 211 WGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 211 ~~f~~~~~~~~~~~~~~~ 228 (568)
+.|++.++..++..+..+
T Consensus 186 ~~f~~~~~~~~i~~~~~~ 203 (438)
T TIGR00712 186 AALYFPAICAIIVALFAF 203 (438)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999987766655444333
No 64
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.88 E-value=1.3e-20 Score=198.31 Aligned_cols=154 Identities=16% Similarity=0.144 Sum_probs=134.1
Q ss_pred HHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 008355 48 MSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCD 127 (568)
Q Consensus 48 ~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 127 (568)
..+.+|. +.+++|.+..+.++..+++.++..+++++.|+++||+ |||+++..+.++++++.+.+..+
T Consensus 35 ~~p~l~~-i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~a----------- 101 (413)
T PRK15403 35 IQPGIIN-VVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRI-GRRPVLITGALIFTLACAATLFT----------- 101 (413)
T ss_pred hccCHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHc-CchHHHHHHHHHHHHHHHHHHHc-----------
Confidence 3334443 6678999999999999999999999999999999999 99999999999999999888877
Q ss_pred CCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccc
Q 008355 128 KDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNV 207 (568)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~ 207 (568)
++.+.++++|+++|++.+...+....++.|.+|+++ |++.++++....++|..+||.+++.+.+..
T Consensus 102 --------~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~ 167 (413)
T PRK15403 102 --------TSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTK------GIKLMAIITSIVLVAPIIGPLSGAALMHFV 167 (413)
T ss_pred --------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 568889999999999998766777788899999888 999999999999999999999999998888
Q ss_pred cchhhhhHHHHHHHHHHHHHH
Q 008355 208 GWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 208 g~~~~f~~~~~~~~~~~~~~~ 228 (568)
|||+.|++.++..+++.+..+
T Consensus 168 gw~~~f~~~~~~~~i~~~~~~ 188 (413)
T PRK15403 168 HWKVLFAIIAVMGLIAFVGLL 188 (413)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 999999988876666554433
No 65
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.88 E-value=9.2e-22 Score=203.85 Aligned_cols=151 Identities=15% Similarity=0.190 Sum_probs=133.5
Q ss_pred HHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCC
Q 008355 52 LVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDAC 131 (568)
Q Consensus 52 l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 131 (568)
..+++++++|++..+.+++.+++.++..++.++.|+++||+ |||+.+..+.++.+++.++++++
T Consensus 17 ~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~--------------- 80 (379)
T TIGR00881 17 AMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRS-NPRVFLPIGLILCAIVNLFFGFS--------------- 80 (379)
T ss_pred hhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhh-CCeehhHHHHHHHHHHHHHHHHh---------------
Confidence 34578889999999999999999999999999999999999 99999999999999999988887
Q ss_pred CCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhh-hhhhheeccccch
Q 008355 132 HPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVAS-SVLVWIQMNVGWG 210 (568)
Q Consensus 132 ~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p-~~~~~i~~~~g~~ 210 (568)
.+.+.+++.|++.|++.+...+...+++.|++|+++ |++++++.+...++|..++| .+++.+.+..+|+
T Consensus 81 ----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 150 (379)
T TIGR00881 81 ----TSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSE------RGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWH 150 (379)
T ss_pred ----hhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhh------heeeEeehhccchhHHHHHHHHHHHHHHhcCCch
Confidence 457889999999999999999999999999999988 99999999999999999999 5667777788999
Q ss_pred hhhhHHHHHHHHHHHHHH
Q 008355 211 WGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 211 ~~f~~~~~~~~~~~~~~~ 228 (568)
+.|++.++..++..+...
T Consensus 151 ~~~~~~~~~~~~~~~~~~ 168 (379)
T TIGR00881 151 WVFIVPGIIAIIVSLICF 168 (379)
T ss_pred hHHHHHHHHHHHHHHHHh
Confidence 999887765555444333
No 66
>PRK11043 putative transporter; Provisional
Probab=99.88 E-value=1.5e-20 Score=197.28 Aligned_cols=163 Identities=15% Similarity=0.219 Sum_probs=135.9
Q ss_pred HHHHHHHHHHHHHHH--HHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhh
Q 008355 41 ERLAYYGMSTNLVNY--LQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTAS 118 (568)
Q Consensus 41 ~~~~~~~~~~~l~~y--l~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~ 118 (568)
....+...-.+.|.+ +++++|.+..+.+++.+++.++..++.++.|+++||+ |||+.+..+.++..++..++..+
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~-- 91 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRY-GRKPVLLAGLSLFALGSLGMLWV-- 91 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhc-CCcHHHHHHHHHHHHHHHHHHHh--
Confidence 333344344444433 6778999999999999999999999999999999999 99999999998888888887776
Q ss_pred ccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhh
Q 008355 119 VSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASS 198 (568)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~ 198 (568)
.+.+.+++.|+++|++.+...+...+++.|.+|+++ +++.++......++|..++|.
T Consensus 92 -----------------~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~g~~ 148 (401)
T PRK11043 92 -----------------ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQK------ANRVFATIMPLVALSPALAPL 148 (401)
T ss_pred -----------------cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHH------HHHHHHHHHHHHHHHHHHHHH
Confidence 457889999999999988888888889999999887 888899988889999999999
Q ss_pred hhhheeccccchhhhhHHHHHHHHHHHHHHh
Q 008355 199 VLVWIQMNVGWGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 199 ~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~ 229 (568)
+++++.+.+||++.|++.++..++..+..+.
T Consensus 149 i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 149 LGAWLLNHFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHHhcCChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998877665555444433
No 67
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.88 E-value=1.8e-20 Score=194.82 Aligned_cols=156 Identities=17% Similarity=0.221 Sum_probs=137.4
Q ss_pred HHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 008355 46 YGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPS 125 (568)
Q Consensus 46 ~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 125 (568)
....+.+|.+. +++|+|..+.+++.+++.++..++.++.|+++||+ |||+++..+.++.+++..++..+
T Consensus 8 ~~~~p~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~i~~~~~~~~--------- 76 (377)
T PRK11102 8 DMYLPALPVIA-ADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSF-GRKPVILGGTLVFALAAVACALA--------- 76 (377)
T ss_pred HHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhc-CChHHHHHHHHHHHHHHHHHHHH---------
Confidence 34456777665 56999999999999999999999999999999999 99999999999999999888877
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheec
Q 008355 126 CDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQM 205 (568)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~ 205 (568)
.+.+.+++.|+++|++.+...+...+++.|.+|+++ |++++++.+...++|..++|.+++.+.+
T Consensus 77 ----------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 140 (377)
T PRK11102 77 ----------QTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEE------FSRMMSFVTLVMTIAPLLAPIIGGWLLV 140 (377)
T ss_pred ----------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457788999999999999999999999999999888 9999999999999999999999999999
Q ss_pred cccchhhhhHHHHHHHHHHHHHH
Q 008355 206 NVGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 206 ~~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
..+|++.|++.++..++..+...
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 141 WFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HcChHHHHHHHHHHHHHHHHHHH
Confidence 89999999887766655544433
No 68
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.88 E-value=5e-20 Score=194.16 Aligned_cols=389 Identities=12% Similarity=0.081 Sum_probs=226.0
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCc-hHHHHHHHHHHHHHHH
Q 008355 33 FILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGR-FWTIASFSIIYCLGMT 111 (568)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Gr-k~~~~~~~~~~~i~~~ 111 (568)
-+.+..++...++-...++++.|+++++|++..++|++.+++.++..+++++.|+++||+ || |+++.++.+..++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~-g~~r~~~~~~~~~~~~~~~ 84 (418)
T TIGR00889 6 KLKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKW-LSAQKVYAVCHFAGALLLF 84 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHH
Confidence 355667777777777889999999999999999999999999999999999999999998 65 7788887777777777
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCccccccccccc--------CCCCCchhhhhhhhhhh
Q 008355 112 LLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQ--------FDETDDGEREKKSSFFN 183 (568)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~--------~~~~~~~~~~~r~~~~~ 183 (568)
+..+. .+.+.+++.|++.+++.+...+...++..+. ..... |.+.+|
T Consensus 85 ~~~~~-------------------~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~------~~r~~G 139 (418)
T TIGR00889 85 FAAQV-------------------TTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFP------PIRVMG 139 (418)
T ss_pred HHHHh-------------------cCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCC------Ceeeeh
Confidence 76665 3467788888888888777666655543222 22222 555554
Q ss_pred hHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCC-ChhHHHHHHHHHHHhhccccc
Q 008355 184 WFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGG-SPLTRIMQVIVASFRKSNVVV 262 (568)
Q Consensus 184 ~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 262 (568)
.+|..+||.+++.+.....|. +|++.++..++..+..+. .++.++.++++ .+..+
T Consensus 140 ------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~~-~~e~~~~~~~~~~~~~~---------------- 195 (418)
T TIGR00889 140 ------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFALT-LPDIPVAKSTAKMSIKV---------------- 195 (418)
T ss_pred ------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHhc-CCCCCCCccccccCHHH----------------
Confidence 478888888888774433344 355555444444433222 22211000000 00000
Q ss_pred CCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHH-HHHHHhhhHHH
Q 008355 263 PADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRL-LPVWASGIVFA 341 (568)
Q Consensus 263 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 341 (568)
. .+....+ . .++ ++.... +..++......
T Consensus 196 ---------~----------------~~~~~~~---~---------------------~k~-~~~~~~~~~~~~~~~~~~ 225 (418)
T TIGR00889 196 ---------M----------------LGLDAFI---L---------------------FKN-KRMAIFFFFSMLLGAPLQ 225 (418)
T ss_pred ---------H----------------hhhhHHH---H---------------------hcC-CCeeeHHHHHHHHHhHHH
Confidence 0 0000000 0 000 000001 11111111111
Q ss_pred hhhccccceeEeecccccCCCCCCcc-cCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHH
Q 008355 342 TVYSQMSTMFVLQGNTMDQHMGPNFK-IPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISI 420 (568)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~ 420 (568)
......+.+.... +.+....+++. ...+.......+..++...+.++ +.+| .++++.+.++.++.+
T Consensus 226 ~~~~~~~~~~~~~--g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~----l~dr-------~g~r~~l~~~~~~~~ 292 (418)
T TIGR00889 226 ITNIFGNGFLHEF--GRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPF----FLKR-------FGIKKVMLLSLVAWA 292 (418)
T ss_pred HHHHhHHHHHHHh--cccccccchhhhhhHHHHHHHHHHHHHHHHHHHHH----HHHH-------hCcHHHHHHHHHHHH
Confidence 1111111111100 00000000000 00112222223333333333333 4555 344456777887777
Q ss_pred HHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHH-HHHHH
Q 008355 421 FSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSL-TTVAV 499 (568)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~l 499 (568)
+++........ .....+.++...++.+++++...+....++.|.+|++.|++++|+.+ ....+
T Consensus 293 v~~~l~~~~~~----------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~l 356 (418)
T TIGR00889 293 LRFGFFAYGDP----------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGF 356 (418)
T ss_pred HHHHHHHHcCc----------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhh
Confidence 77655543210 00123344556678888888888888999999999999999999997 56889
Q ss_pred HHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhcee
Q 008355 500 GNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFTY 560 (568)
Q Consensus 500 g~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~ 560 (568)
|..+||.+.|.+.+..+..+. .+++..|.+.++++++..+.++++.++.++
T Consensus 357 g~~iGp~l~G~l~~~~g~~~~----------~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~ 407 (418)
T TIGR00889 357 GSLLGYILSGVMVEKMFAYGT----------FDWQTMWLFFAGYIAILAVLFMIFFKYSHN 407 (418)
T ss_pred HHHHHHHHHHHHHHHhccccC----------CchHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 999999999998775431110 124567888888888888888888776544
No 69
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.88 E-value=8.6e-22 Score=197.92 Aligned_cols=184 Identities=19% Similarity=0.194 Sum_probs=164.7
Q ss_pred cCCCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHH
Q 008355 24 KTGNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFS 103 (568)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~ 103 (568)
.++.++.+.++++..++++..-|.+-..+ .-.++.+|+++.+.|++...+.+.++++.|+.|+++||+ .||+++.+|.
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~-~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadry-NR~~v~~vG~ 105 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVL-KEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRY-NRKRVIAVGI 105 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhh-HHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhc-CcceEEeeHH
Confidence 33446678888899999999998776544 457888999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhh
Q 008355 104 IIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFN 183 (568)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (568)
.++.++.+..++. ..++++.+.|.+.|+|.+...|..+++++|.||.++ |++.++
T Consensus 106 ~iW~~Av~~~~fs-------------------~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~------Rs~~~~ 160 (493)
T KOG1330|consen 106 FIWTLAVFASGFS-------------------NHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDK------RSRVLG 160 (493)
T ss_pred HHHHHHHHHHHHH-------------------HHHHHHHHHHHHhccchhhhcccchhHhhhcCcchh------hhHHHH
Confidence 9999999999988 569999999999999999999999999999999998 999999
Q ss_pred hHHHHHHHhHHHhhhhhhheecccc-chhhhhHHHHHHHHHHHHHHhcCcee
Q 008355 184 WFYLSINIGALVASSVLVWIQMNVG-WGWGFGIPAVAMAIAVVFFFSGSRLY 234 (568)
Q Consensus 184 ~~~~~~~ig~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~~ 234 (568)
++|+++++|..+|.+.+..+.+..+ |||+|+..+++.++..++.+++.++.
T Consensus 161 ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP 212 (493)
T KOG1330|consen 161 IFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREP 212 (493)
T ss_pred HhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCc
Confidence 9999999999999999999988776 99999999988777777666665543
No 70
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.88 E-value=3.9e-20 Score=197.80 Aligned_cols=361 Identities=14% Similarity=0.115 Sum_probs=241.4
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
|+...+...+++.+++......-++-++. ++.-|+..++++..+..+-..+..+++|.++||+ .|||+++.+-++.++
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~-~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~-drrrili~~~~~~~~ 87 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVT-QLTGSPLMVALVQAASTLPILLLSLFAGALADRF-DRRRILILSQLLRAL 87 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cchHHHHHHHHHHHH
Confidence 44556667777778777766666665554 4667889999999999999999999999999999 999999999988777
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
..+.+++...... .+.+.+++.-++.|++.+...|+.++++.+..|+++ ..++.++.++.
T Consensus 88 ~~~~L~~l~~~~~--------------~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~------L~~A~al~s~~ 147 (524)
T PF05977_consen 88 VALLLAVLAFFGL--------------LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED------LPAANALNSIS 147 (524)
T ss_pred HHHHHHHHHHhCc--------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh------HHHHHHHHHHH
Confidence 6666554432222 467888888999999999999999999999999988 99999999999
Q ss_pred HHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchh
Q 008355 189 INIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSL 268 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (568)
.|+...+||.++|.+...+|-.++|.+.++..++.+..+...+++.++ +..+.++..+.+...++.
T Consensus 148 ~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~---~~~~~e~~~~~l~~G~ry----------- 213 (524)
T PF05977_consen 148 FNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPP---SSLPRERFFSALREGLRY----------- 213 (524)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc---cccchhhhhhhHHHHHHH-----------
Confidence 999999999999999998999999999887776665554444432211 111111111111111110
Q ss_pred hhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhcccc
Q 008355 269 LYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMS 348 (568)
Q Consensus 269 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (568)
+.+.+.+...+.......++......+.
T Consensus 214 ----------------------------------------------------v~~~~~l~~~l~~~~~~~l~~~a~~aLl 241 (524)
T PF05977_consen 214 ----------------------------------------------------VRSSPPLRSVLLRSFLFNLFASAVWALL 241 (524)
T ss_pred ----------------------------------------------------HhcchHHHHHHHHHHHHHHhhhHHHHhh
Confidence 0000111111111111111111111111
Q ss_pred ceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 008355 349 TMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGI 428 (568)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~ 428 (568)
..+.. ..++ +-....+.+....+++.++.+.+..+ +.+| .+..+.+..+.++.+++++.+++
T Consensus 242 Pl~a~------~~l~-~~a~~yGll~a~~gvGai~Gal~~~~----l~~~-------~~~~~lv~~~~~~~a~~~~~lal 303 (524)
T PF05977_consen 242 PLFAR------DVLG-GGASGYGLLLAAFGVGAILGALLLPR----LRRR-------LSSRRLVLLASLLFALALLLLAL 303 (524)
T ss_pred hHHHH------HHhC-CcHHHHHHHHHHHHHHHHHHHHHHHH----hhcc-------cCcchhhHHHHHHHHHHHHHHhc
Confidence 11111 1111 00011223333334444444433322 2222 34445667777777777776665
Q ss_pred HHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 008355 429 LEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLV 508 (568)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~ 508 (568)
.. +.+...+.+++.|++.....+..++.+.+..|+++||++.+++++....+..+|+.+.
T Consensus 304 ~~--------------------~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~ 363 (524)
T PF05977_consen 304 SP--------------------SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLW 363 (524)
T ss_pred ch--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 44 5566677788889999999999999999999999999999999999999999999999
Q ss_pred HHhhhhh
Q 008355 509 TIVTKVT 515 (568)
Q Consensus 509 ~~i~~~~ 515 (568)
|.+.+..
T Consensus 364 G~la~~~ 370 (524)
T PF05977_consen 364 GFLADHF 370 (524)
T ss_pred HHHHHHh
Confidence 9987654
No 71
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.87 E-value=4.3e-20 Score=193.00 Aligned_cols=180 Identities=13% Similarity=-0.012 Sum_probs=132.5
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHH-HhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQK-QLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIY 106 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~ 106 (568)
+|+++...+ .+...+....+...+...+.+ ++|+|..+.++..+++.+.+.+++++.|++.||+ |.|+++.++.++.
T Consensus 33 ~r~l~~s~~-~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~-G~R~v~~~~~ll~ 110 (462)
T PRK15034 33 RRNLWISVS-CLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIF-GGRRWTVFSTAIL 110 (462)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHH
Confidence 355554444 444455555555555666654 7999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY 186 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (568)
++.++.++++... ..++++.+++.|++.|++ |...++....+++++|+++ ||+++|++.
T Consensus 111 ~i~~~~~~~a~~~--------------~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~------rG~A~Gi~~ 169 (462)
T PRK15034 111 IIPCVWLGIAVQN--------------PNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAK------QGSALGING 169 (462)
T ss_pred HHHHHHHHHHHcc--------------cCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhH------hHHHHHHHH
Confidence 9988888865110 114688899999999998 7788899999999999998 999999986
Q ss_pred HHHHHhHHHhhhhhhhe-----ec-------------cccchhhhhHHHHHHHHHHHHHHhc
Q 008355 187 LSINIGALVASSVLVWI-----QM-------------NVGWGWGFGIPAVAMAIAVVFFFSG 230 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i-----~~-------------~~g~~~~f~~~~~~~~~~~~~~~~~ 230 (568)
...|+|..+++.+...+ .. ..+|+.++++..+..+++.++.++.
T Consensus 170 g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~ 231 (462)
T PRK15034 170 GLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSG 231 (462)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66666666555544322 12 2346666666555554454444443
No 72
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.87 E-value=3.9e-20 Score=193.86 Aligned_cols=390 Identities=8% Similarity=-0.020 Sum_probs=231.0
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
|.+|.+....++...++....++++.|+++++|++..+.|++.+.+.+...+++++.|+++||+ |||+.+..+.+..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKL-GLKKHLLWIISGLLV 80 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHHH
Confidence 4567777888888999999999999999999999999999999999999999999999999999 999999887766555
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
+..........+.. .......+++.+++.|++.+...+....+..|..+ + ++..++.....
T Consensus 81 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~------~~~~~g~~~~~ 141 (396)
T TIGR00882 81 LFAPFFIYVFGPLL-----------QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--N------SNFEYGKARMF 141 (396)
T ss_pred HHHHHHHHHhhhHH-----------HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--h------cccccchhhhh
Confidence 44332211000100 00123345667888888888888887776655422 2 44567777788
Q ss_pred HHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchh
Q 008355 189 INIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSL 268 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (568)
.++|..++|.+++.+.+ .+|+.+|++.+...++..++.+...++. ++++...+ . .
T Consensus 142 ~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~------------~--~------ 196 (396)
T TIGR00882 142 GCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA----PSSATVAN------------A--L------ 196 (396)
T ss_pred cccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC----chhhhhhc------------c--c------
Confidence 89999999999987755 6999999988766655544443332211 11000000 0 0
Q ss_pred hhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhh-ccc
Q 008355 269 LYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVY-SQM 347 (568)
Q Consensus 269 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 347 (568)
++ +.++.+..+.. +-.++ |.+.............+... .+.
T Consensus 197 ---~~-------------~~~~~~~~~~~---------------------~~l~~-~~~~~~~l~~~~~~~~~~~~~~~~ 238 (396)
T TIGR00882 197 ---GA-------------NASAFSLKLAL---------------------ELFRQ-RKFWMFVLYVVGVACVYDVFDQQF 238 (396)
T ss_pred ---cc-------------ccCCCCHHHHH---------------------HHHcC-CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00000000000 00011 11111111111111111111 222
Q ss_pred cceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHH
Q 008355 348 STMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAG 427 (568)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~ 427 (568)
+.++..... ....+ . ...+.......+...+.....++ +.||.+ +++.+.++.++.++++....
T Consensus 239 ~~y~~~~~~--~~~~~--~-~~~g~~~~~~~i~~~~~~~~~g~----l~~r~g-------~~~~l~~~~~l~~l~~~~~~ 302 (396)
T TIGR00882 239 ANFFTSFFA--TPQQG--T-RVFGYVTTMGELLNALIMFCAPL----IINRIG-------AKNALLIAGTIMSVRIIGSS 302 (396)
T ss_pred HHHHHHhcc--ccccc--h-HHHHHHHHHHHHHHHHHHHHHHH----HHHHhc-------cchhHHHHHHHHHHHHHHHH
Confidence 222211100 00000 0 00112222222333333333333 455533 33456777777777665544
Q ss_pred HHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHH-HHHHHHHHHHHHHH
Q 008355 428 ILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSAL-SLTTVAVGNYLSTL 506 (568)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~-~~~~~~lg~~lg~~ 506 (568)
... +.++++...++.+++..........+..+..|++.++++.+. ++....+|+.+++.
T Consensus 303 ~~~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~ 362 (396)
T TIGR00882 303 FAT--------------------TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLST 362 (396)
T ss_pred hcC--------------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHH
Confidence 322 445555566777777766666677788888999999988776 67889999999999
Q ss_pred HHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHH
Q 008355 507 LVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLW 553 (568)
Q Consensus 507 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~ 553 (568)
+.|.+.+.. ++...|.+.+++.++...+..+
T Consensus 363 l~G~l~~~~----------------G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 363 LAGNMYDSI----------------GFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred hHHHHHHhc----------------ccHHHHHHHHHHHHHHHHHHHH
Confidence 999987643 2345777878887777665543
No 73
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.87 E-value=7.7e-20 Score=194.12 Aligned_cols=357 Identities=12% Similarity=0.094 Sum_probs=220.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhc---cCchH-HHHHHHHHHHHHHHH
Q 008355 37 NECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSY---MGRFW-TIASFSIIYCLGMTL 112 (568)
Q Consensus 37 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~---~Grk~-~~~~~~~~~~i~~~~ 112 (568)
..+..+..+..+..+++.|+.+++|++..++|++.++..+...+..|+.|+++||. +|||| .++.+.+..+++.++
T Consensus 7 g~~~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~ 86 (437)
T TIGR00792 7 GDFGNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVL 86 (437)
T ss_pred chHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHH
Confidence 45666777777888999999999999999999999999999999999999999983 27744 677777778877777
Q ss_pred HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCC-CCCchhhhhhhhhhhhHHHHHHH
Q 008355 113 LTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFD-ETDDGEREKKSSFFNWFYLSINI 191 (568)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~~~~~~~~i 191 (568)
+....+.+ .......+++.+++.+++.+...+...++.+|..+ +++ |++..++.+...++
T Consensus 87 ~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~------R~~~~~~~~~~~~~ 147 (437)
T TIGR00792 87 LFTTPDFS-------------ATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRE------RESLSTFRRFGATL 147 (437)
T ss_pred HHhCCCCC-------------cchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHH------HHHHHHHHHHHHHH
Confidence 76542111 01234566777788888888888888888899875 445 99999998888888
Q ss_pred hHHHhhhhhhhee-------ccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCC
Q 008355 192 GALVASSVLVWIQ-------MNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPA 264 (568)
Q Consensus 192 g~~~~p~~~~~i~-------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (568)
|..+++.+.+.+. +..+|++.+.+.++..++..+......++.+++.+++++
T Consensus 148 g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~~~--------------------- 206 (437)
T TIGR00792 148 GGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKNIE--------------------- 206 (437)
T ss_pred HHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcccc---------------------
Confidence 8877766654443 246899988877766555554443333321100000000
Q ss_pred cchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhh
Q 008355 265 DKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVY 344 (568)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (568)
++.+..+. + + .....|.+...+....+....+...
T Consensus 207 ------------------------~~~~~~~~----------------~----~-~l~~~~~~~~~~~~~~~~~~~~~~~ 241 (437)
T TIGR00792 207 ------------------------KKLSLKQI----------------F----K-ALFKNDQLLILCLAYLFYNLAFNIK 241 (437)
T ss_pred ------------------------cCCCHHHH----------------H----H-HHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 00000000 0 0 0000111111111111111112222
Q ss_pred ccccceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHH
Q 008355 345 SQMSTMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMV 424 (568)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~ 424 (568)
.....++..+... +. ...+.+.....+..++..++..+ +.+| .++++.+..+.++.+++.+
T Consensus 242 ~~~~~~~~~~~~~-~~-------~~~~~~~~~~~i~~ii~~~~~~~----l~~r-------~g~~~~~~~~~~~~~~~~~ 302 (437)
T TIGR00792 242 NGVQVYYFTYVLG-DP-------ELFSYMGSIAIVAGLIGVLLFPR----LVKK-------FGRKILFAGGILLMVLGYL 302 (437)
T ss_pred cchhheeEeeecC-Ch-------HHHHHHHHHHHHHHHHHHHHHHH----HHHH-------hCcHHHHHHHHHHHHHHHH
Confidence 2222333322111 00 00112222233444444444444 4555 3344566777777777766
Q ss_pred HHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCC-------hhhHHHHHHHHHHHH
Q 008355 425 AAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAP-------DAMRSLCSALSLTTV 497 (568)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~~ 497 (568)
...... .+.+..+...++.+++.+...+..+++..|..| ++.+|.+.|++++..
T Consensus 303 ~~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 363 (437)
T TIGR00792 303 IFFFAG-------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVR 363 (437)
T ss_pred HHHHcc-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHH
Confidence 554321 133445556677888888888888999888865 567899999999999
Q ss_pred HHHHHHHHHHHHHhhhhhc
Q 008355 498 AVGNYLSTLLVTIVTKVTT 516 (568)
Q Consensus 498 ~lg~~lg~~l~~~i~~~~~ 516 (568)
.+|..+++.+.+.+.+..+
T Consensus 364 ~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 364 KLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 9999999999999887654
No 74
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.87 E-value=1.3e-19 Score=189.73 Aligned_cols=170 Identities=12% Similarity=0.087 Sum_probs=144.7
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGM 110 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 110 (568)
+...++..+....+.+...+.+|. +.+++|.|..+.+++.+.+.++..++.++.|+++||+ |||+.+..+.+...++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~-g~r~~l~~~~~~~~i~~ 82 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPR-IAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRS-GRKPVAIPGAALFIIAS 82 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHh-CChHHHHHHHHHHHHHH
Confidence 344555666666666666666665 5567999999999999999999999999999999999 99999999999999988
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHH
Q 008355 111 TLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSIN 190 (568)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 190 (568)
.++..+ ++.+.+++.|+++|++.+...+...+++.|.+|+++ |+++.++.+...+
T Consensus 83 ~~~~~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~~~~~~ 137 (392)
T PRK10473 83 LLCSLA-------------------ETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRR------RAKVLSLLNGITC 137 (392)
T ss_pred HHHHHh-------------------CcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHH
Confidence 888776 457778899999999999989999999999999988 9999999999999
Q ss_pred HhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHH
Q 008355 191 IGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFF 227 (568)
Q Consensus 191 ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~ 227 (568)
+|..++|.+++.+.+..||++.|++.++..++..++.
T Consensus 138 i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~ 174 (392)
T PRK10473 138 IIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLS 174 (392)
T ss_pred HHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHH
Confidence 9999999999988888899999988776655554443
No 75
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.87 E-value=9.7e-20 Score=189.93 Aligned_cols=342 Identities=11% Similarity=0.047 Sum_probs=207.0
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCch----HHHHHHHHHHHHH
Q 008355 34 ILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRF----WTIASFSIIYCLG 109 (568)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk----~~~~~~~~~~~i~ 109 (568)
.....++..+++..+.+++|.|++ ++|.|..++|++.+++.+...++.++.|.++||+ ||+ +.+.++.....
T Consensus 9 ~~~~~~~~~~~~g~~~p~l~~~l~-~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~-- 84 (382)
T PRK11128 9 LALSYFGYFFAYGVFLPFWSVWLK-GQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDP-SQLIPALRLLALLTLLFA-- 84 (382)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHH-hcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhh-cchHHHHHHHHHHHHHHH--
Confidence 334456666677778889999995 5899999999999999999999999999999999 984 33322221111
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHH
Q 008355 110 MTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSI 189 (568)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (568)
....... ++.+.+++.|++.|++.+...|...++..++ .++ |+++++..+...
T Consensus 85 ~~~~~~~-------------------~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~------~~~a~~~~~~~~ 137 (382)
T PRK11128 85 VAFWFGA-------------------HSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQ------IGLDYGKVRLWG 137 (382)
T ss_pred HHHHHhc-------------------ccHHHHHHHHHHHHHHHcccccHHHHHHHHH--Hhh------ccCCcchHHHHH
Confidence 1111111 4578888999999999999999888877776 334 788888888899
Q ss_pred HHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhh
Q 008355 190 NIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLL 269 (568)
Q Consensus 190 ~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (568)
++|..+||.+++++.+.+|||..|++.++..++..+... ..++. +|++++.++ .
T Consensus 138 ~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~----------------~------ 191 (382)
T PRK11128 138 SIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQL-LRPTI---MPQGESRQQ----------------E------ 191 (382)
T ss_pred HHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH-ccCCC---CCccccccc----------------c------
Confidence 999999999999999999999999877754444433322 22211 111000000 0
Q ss_pred hhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHH-HHHhhhHHHhhhcccc
Q 008355 270 YETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLP-VWASGIVFATVYSQMS 348 (568)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 348 (568)
.... ..++ +..+.++.+.... .++........+...+
T Consensus 192 -----------------~~~~--------------------~~~~-----~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 229 (382)
T PRK11128 192 -----------------SAGW--------------------PAWK-----ALLKEPTVWRFLLCVSLLQGSHAAYYGFSA 229 (382)
T ss_pred -----------------cccc--------------------chHH-----HHHcChhHHHHHHHHHHHHHHhHhHHHHHH
Confidence 0000 0000 0011112211111 1111111111111111
Q ss_pred ceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 008355 349 TMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGI 428 (568)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~ 428 (568)
.+. .+ .+ ......+.+.....+..++...+.+ +..|| .++++.+..++++.+++++....
T Consensus 230 ~~~-~~-------~g-~s~~~~g~~~~~~~~~~~~~~~~~g----~l~~r-------~~~~~~l~~~~~~~~~~~~~~~~ 289 (382)
T PRK11128 230 IYW-QA-------AG-YSASTIGYLWSLGVVAEVLIFAFSN----RLFRR-------WSARDLLLLSAICGVVRWGLMGS 289 (382)
T ss_pred HHH-HH-------CC-CCHhHHHHHHHHHHHHHHHHHHHHH----HHHHH-------CCHHHHHHHHHHHHHHHHHHHHh
Confidence 111 11 11 0000112222222222222223322 34444 45556677787777777665543
Q ss_pred HHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHH-HHHHHHHHHHHHH
Q 008355 429 LEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSL-TTVAVGNYLSTLL 507 (568)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~lg~~lg~~l 507 (568)
.+ +.+.+++..++.+++.+...+....+..+. |++.+++++++.+ ....+|..+|+.+
T Consensus 290 ~~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i 348 (382)
T PRK11128 290 TT--------------------ALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVL 348 (382)
T ss_pred hh--------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 555666677888999998899999998887 4555789999887 5567888999999
Q ss_pred HHHhhhhh
Q 008355 508 VTIVTKVT 515 (568)
Q Consensus 508 ~~~i~~~~ 515 (568)
.|.+.+..
T Consensus 349 ~G~l~~~~ 356 (382)
T PRK11128 349 SGFLYQHL 356 (382)
T ss_pred HHHHHHhc
Confidence 99887643
No 76
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.86 E-value=5.4e-21 Score=201.01 Aligned_cols=377 Identities=14% Similarity=0.161 Sum_probs=244.4
Q ss_pred HhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchh
Q 008355 59 QLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQT 138 (568)
Q Consensus 59 ~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (568)
+++++..+-+++.+++..++.++++++|+++||+ |.|+++..+.++.++++++.++++.. +.
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~-G~r~v~~~~~~~sa~~t~l~P~aa~~-----------------~~ 128 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKF-GARRVFFISGLISALLTLLTPLAASI-----------------GF 128 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHHHh-----------------cc
Confidence 5788899999999999999999999999999999 99999999999999999999988552 34
Q ss_pred HHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheecc-ccchhhhhHHH
Q 008355 139 AVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMN-VGWGWGFGIPA 217 (568)
Q Consensus 139 ~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~-~g~~~~f~~~~ 217 (568)
+.+++.|+++|++.|...|+...+.+++.|++| |++..++.+.+..+|.+++-.++|++.++ +||+++|++.+
T Consensus 129 ~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~E------rs~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g 202 (466)
T KOG2532|consen 129 YLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNE------RSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFG 202 (466)
T ss_pred hhhHHHHHHhHHHHhHHHhhhhceeeeECCHHH------HHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHH
Confidence 478999999999999999999999999999999 99999999999999999999999999998 99999999988
Q ss_pred HHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhhhhhhhhhhccCccccCCccchhhhhh
Q 008355 218 VAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYETADEECNIQGSRKLESTSKFKFFDKA 297 (568)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 297 (568)
...++..++++....+ .|++++. +.+.+....+.+..++..+
T Consensus 203 ~~g~i~~~~w~~~~~d----~P~~h~~-----------------is~~El~~I~~~k~~~~~~----------------- 244 (466)
T KOG2532|consen 203 IVGLIWFILWFLFYSD----SPSKHPN-----------------ISEKELKYIEKGKSEAHVK----------------- 244 (466)
T ss_pred HHHHHHHHHHHHHhcC----CcccCCC-----------------CCHHHHHHHHhcccccccC-----------------
Confidence 7776666655544432 2221110 0000000011100000000
Q ss_pred hhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhccccceeEeecccccCCCCCCcccCchhhcccc
Q 008355 298 AVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMSTMFVLQGNTMDQHMGPNFKIPSASLSLFD 377 (568)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (568)
++...||+...+. ...+...+..+.-...++...++.++++.. ...++.. ..+.+++++
T Consensus 245 ---------~~~~vP~~~i~ts----~~vwai~~~~f~~~~~~~~l~~y~PtY~~~-VL~f~v~-------~~G~~salP 303 (466)
T KOG2532|consen 245 ---------KKPPVPYKAILTS----PPVWAIWISAFGGNWGFYLLLTYLPTYLKE-VLGFDVR-------ETGFLSALP 303 (466)
T ss_pred ---------CCCCCCHHHHHcC----HHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-HhCCChh-------hhhHHHHHH
Confidence 0023466422211 111111222233334444455555555432 2222221 355667777
Q ss_pred chhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHH--HHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhH
Q 008355 378 TLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRM--GIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQ 455 (568)
Q Consensus 378 ~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~--~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (568)
.+...+...+.+.+.|++.+| ... .+..+++ .++....++++++++..... +. +.
T Consensus 304 ~l~~~~~k~~~g~lsD~l~~~-~ls---~t~~rkifn~i~~~~~ai~l~~l~~~~~~------------------~~-~~ 360 (466)
T KOG2532|consen 304 FLAMAIVKFVAGQLSDRLTFR-ILS---ETTVRKIFNTIAFGGPAVFLLVLAFTSDE------------------HR-LL 360 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhc-cCc---hHhHHHHHHhHHHHHHHHHHHeeeecCCC------------------cc-hH
Confidence 777777777777755555544 211 2233344 44444455555555443310 11 22
Q ss_pred HHHHHHHHHHHHHHhhhhHHhhhcc-CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhH
Q 008355 456 VPQYFIVGCAEVFTFIGQLEFFYDQ-APDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLD 534 (568)
Q Consensus 456 i~~~~l~g~~~~~~~~~~~~~~~~~-~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~ 534 (568)
...++..+.+..........-.... + +++-+..+|+.+....+.+.++|.+++.+.. .. ...+| +
T Consensus 361 a~~~l~~~~~~~g~~~~Gf~~~~~~~a-pq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~~--t~~eW----------~ 426 (466)
T KOG2532|consen 361 AVILLTIAIGLSGFNISGFYKNHQDIA-PQHAGFVMGIINFVGALAGFIAPLLVGIIVT-DN--TREEW----------R 426 (466)
T ss_pred HHHHHHHHHHHcccchhhhHhhhhhcc-chHHHHHHHHHHHHHHHHHHHHHHheeeEeC-CC--CHHHH----------H
Confidence 2222333333333333333333333 5 5668999999999999999999999998763 11 22245 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q 008355 535 YFYWLLTILSVLNFLVYLWIA 555 (568)
Q Consensus 535 ~~f~~~a~~~~v~~v~~~~~~ 555 (568)
.+|++.+++.+++.+++.++.
T Consensus 427 ~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 427 IVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred HHHHHHHHHHHHhchheeEee
Confidence 789999999999988777764
No 77
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.86 E-value=5.5e-20 Score=217.96 Aligned_cols=136 Identities=10% Similarity=0.021 Sum_probs=109.1
Q ss_pred hhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHH---HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHH
Q 008355 65 VTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSI---IYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVT 141 (568)
Q Consensus 65 ~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (568)
...+++.+++.+...++.+++|+++||+ |||+++..... +.++..++.... .+++.+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~-~rk~~~~~~~~~~~~~~~~~~~~~~~-------------------~s~~~l 111 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKY-DKAKLAKILKFAEIGIAALAIYGFHL-------------------NSVPLL 111 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhc-cHHHHHHHHHHHHHHHHHHHHHHHHH-------------------hhHHHH
Confidence 3467888889999999999999999999 99997643222 222222222222 358889
Q ss_pred HHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHH
Q 008355 142 FVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMA 221 (568)
Q Consensus 142 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~ 221 (568)
++.|+++|++.+...|+..+++.+++|+++ |++++++.+++.++|.++||.++|++....+|++.|+..++..+
T Consensus 112 ~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~------~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~ 185 (1140)
T PRK06814 112 FAALFLMGIHSALFGPIKYSILPDHLNKDE------LLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAV 185 (1140)
T ss_pred HHHHHHHHHHHHhhchHHHHhhHhhcCccc------cchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHH
Confidence 999999999999999999999999999988 99999999999999999999999999999999999855444444
Q ss_pred HHHHH
Q 008355 222 IAVVF 226 (568)
Q Consensus 222 ~~~~~ 226 (568)
+++++
T Consensus 186 ~~~~~ 190 (1140)
T PRK06814 186 LGWLA 190 (1140)
T ss_pred HHHHH
Confidence 44433
No 78
>PRK10133 L-fucose transporter; Provisional
Probab=99.86 E-value=2e-19 Score=190.59 Aligned_cols=152 Identities=17% Similarity=0.099 Sum_probs=122.6
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
...+..+.+..+...+........+| .+++++|.|..+.|+..+.+.++..++.++.|+++||+ |||+++..+.++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~p-~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~-G~r~~l~~g~~~~~ 102 (438)
T PRK10133 25 IIPFALLCSLFFLWAVANNLNDILLP-QFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKL-SYKAGIITGLFLYA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHH
Confidence 33445555555555555544444455 46899999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++.+++..... . ++.+.++++|+++|+|.|...++..+++.|..|+++ |.+.+++.+.
T Consensus 103 ~~~~l~~~~~~--a--------------~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~------~~~~~s~~~~ 160 (438)
T PRK10133 103 LGAALFWPAAE--I--------------MNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESS------GHFRLNLAQT 160 (438)
T ss_pred HHHHHHHHHHh--c--------------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhh------HHHHHHHHHH
Confidence 99987642210 0 468889999999999999999999999998766655 6667888888
Q ss_pred HHHHhHHHhhhhhhhe
Q 008355 188 SINIGALVASSVLVWI 203 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i 203 (568)
...+|..+||.+++.+
T Consensus 161 ~~~~G~~~g~~~g~~l 176 (438)
T PRK10133 161 FNSFGAIIAVVFGQSL 176 (438)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9899999999887654
No 79
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.86 E-value=1.3e-19 Score=215.33 Aligned_cols=156 Identities=11% Similarity=0.068 Sum_probs=126.6
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCh--hhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGN--VTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSII 105 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~--~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~ 105 (568)
.+....+++..++.++...+....+..++.+.++.+. ...+++.+++.+...++.+++|+++||+ |||++++++.++
T Consensus 8 ~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~-grk~~l~~~~~~ 86 (1146)
T PRK08633 8 IIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKF-SKNRVIRIVKLF 86 (1146)
T ss_pred hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccc-cHHHHHHHHHHH
Confidence 3445566666777666666666666667766666654 3468889999999999999999999999 999999988876
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
.+++.++..+.... .+++.+++.|+++|++.+...++..++++|++|+++ |+++++++
T Consensus 87 ~~~~~~~~~~~~~~----------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~------r~~~~~~~ 144 (1146)
T PRK08633 87 EVGLTLLIVLAYYL----------------GWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKEN------LSRANGLL 144 (1146)
T ss_pred HHHHHHHHHHHHHH----------------ccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCccc------chhhhhHH
Confidence 66665554433111 347889999999999999999999999999999988 99999999
Q ss_pred HHHHHHhHHHhhhhhhheecc
Q 008355 186 YLSINIGALVASSVLVWIQMN 206 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~~ 206 (568)
..+.++|.++||.+++++.+.
T Consensus 145 ~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 145 EAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999988765
No 80
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=99.86 E-value=1.7e-21 Score=202.23 Aligned_cols=366 Identities=39% Similarity=0.638 Sum_probs=229.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhh
Q 008355 96 FWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGER 175 (568)
Q Consensus 96 k~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~ 175 (568)
.|+++++.+++.+|.+++.+++..+.. +.+.+...++++..+.++|.|++.|+..++++|+++++++
T Consensus 1 yktI~~g~~~~~~G~~ll~l~~~~~~~----------~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~--- 67 (372)
T PF00854_consen 1 YKTILLGSIVYLLGHVLLTLSAIPPSL----------PSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDD--- 67 (372)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHTSSSC----------------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTT---
T ss_pred CHhhhHHHHHHHHHHHHhHHHHhcchh----------hhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccch---
Confidence 378899999999999998887553331 1234567899999999999999999999999999998742
Q ss_pred hhhhhhhhhHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeec-CCCCChhHHHH-HHHHH
Q 008355 176 EKKSSFFNWFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQ-KPGGSPLTRIM-QVIVA 253 (568)
Q Consensus 176 ~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~ 253 (568)
.+|.++++++|++.|+|+.+++.+.+++.+++||.+.|+++++..+++++.++..++.++++ ++.+.+..+.. .+...
T Consensus 68 ~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y~~~~~~~~~~~~~~~~~~~~~ 147 (372)
T PF00854_consen 68 SRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRYRKVAPPGGSPLTNFIKLVLVA 147 (372)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT--S-----S--S--SHHHHHH
T ss_pred hhhhhhHHHHHHHHhhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCCcCcCccCCcccchhHHHHHHH
Confidence 23999999999999999999999999999999999999999999999999988888887776 66666666633 33344
Q ss_pred HHhhcccccCCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHH
Q 008355 254 SFRKSNVVVPADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPV 333 (568)
Q Consensus 254 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (568)
..+++....|....++.+...... +. ..... ............... ..+.+ ++.++++..+.+.+.++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~--~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~k~~~~~~~~ 216 (372)
T PF00854_consen 148 AFKKRKLAVPKGSSWLDWALFQYS-ER---SIFGI--IVFIRAAVIFFPEIF---FWALF--CQVQRVEELKALIRFLPI 216 (372)
T ss_dssp HHHHHCCCH-HHHHHHHHHHHHHC-CC---CCCCC--CCHHHHHHHHCCCHH---HHTTT--SSTTTHHHCCHHHCHHHC
T ss_pred HHHHhhcccccchHHHHHhhhhhh-hh---hhhhh--hhhccchhhhhhhhh---hcccC--Cccceeeeeeeeeecccc
Confidence 444444444332222222211110 00 00000 000000000000000 00000 122334445555556666
Q ss_pred HHhhhHHHhhhccccceeEeecccccCCCCCC-cccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHH
Q 008355 334 WASGIVFATVYSQMSTMFVLQGNTMDQHMGPN-FKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRM 412 (568)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~ 412 (568)
+.+...+...+.+.......+...++.... + +.+|+++++.++.+.++++.|+.+++++|+.++ ++. .+...++
T Consensus 217 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ip~~~l~~~n~i~iii~~pi~~~~~~p~~~~-~~~---~~~~~k~ 291 (372)
T PF00854_consen 217 FLFWIFYWQMYSQLNTFFLLQVPQMDRGIG-GLFGIPPAWLQSFNPIFIIIFIPILDRVVYPLLRR-GIQ---PSPPQKF 291 (372)
T ss_dssp CCHHHHHHHHCTCCHHHHHHCGGGTTT-SS-------SGGGTTHHHHHCHHHHHHHHHHCCCTTTT----------HHHH
T ss_pred CeEEEEeeehhhhhhhHHHHhccccccccc-cccccccchhhhHHHHHHHHHHHHHHHHHhHHhhh-ccc---chhhhhh
Confidence 666667777777777766667666666666 6 889999999999999999999999999998882 222 7888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHH
Q 008355 413 GIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSAL 492 (568)
Q Consensus 413 ~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~ 492 (568)
.+|++++.+++++.+.++..+...... ....+.+|.++.+++..++|.+..+...+..+|.+|++..+..+|+
T Consensus 292 ~~G~~~~~~~~~~~~~v~~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~e~~l~~~g~~~~~~~a~~~~p~~m~~~ 364 (372)
T PF00854_consen 292 GIGMVFAILAMFVAAIVEIRRLCYAQP-------CGKVSPWWQVPMYIFWLIPEYFLSGTGESAAYEFAPSRAPSSMMGI 364 (372)
T ss_dssp HHH-HHHHHHHHTTTHHHH---HH-----------TT--THHHHHHHHHHHHHHHTTTTHHHHHHHHHTTTT-SSSSTHH
T ss_pred hHHHHHHHHHHHHHHHHHhhhhhcccc-------cCCCChhhHHHHHHHHHHHHHHhhHHHHHHHHHhhHHhhhHHHHHH
Confidence 999999999999888777533221111 1122336777999999999999999988877777777777666666
Q ss_pred HHHHH
Q 008355 493 SLTTV 497 (568)
Q Consensus 493 ~~~~~ 497 (568)
++...
T Consensus 365 ~~~~~ 369 (372)
T PF00854_consen 365 WFALS 369 (372)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66443
No 81
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.85 E-value=2.8e-20 Score=192.45 Aligned_cols=159 Identities=18% Similarity=0.173 Sum_probs=135.8
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLG 109 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 109 (568)
+.+...+..+......+...+.+|.++++++|+|..+.+++.+.+.++..++.++.|+++||+ |||+.+.++.++.+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~i~ 80 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKF-GPRYTTTLSLLLLAIP 80 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHH
Confidence 456677777777778888888888789999999999999999999999999999999999999 9999999999999999
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCc-hhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 110 MTLLTLTASVSGLKPSCDKDACHPTGA-QTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
.++++++ . +.+.+++.|+++|++.+. .+...++++|++|+++ |+++.+++...
T Consensus 81 ~~~~~~~-------------------~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~------r~~~~~~~~~~ 134 (366)
T TIGR00886 81 CLWAGLA-------------------VQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKI------QGTALGLAAGW 134 (366)
T ss_pred HHHHHHH-------------------hhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhh------hhHHHHHHHHH
Confidence 9888877 4 578899999999999665 4567889999999988 99999999877
Q ss_pred HHHhHHHhhhhhhheec----------cccchhhhhH
Q 008355 189 INIGALVASSVLVWIQM----------NVGWGWGFGI 215 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~----------~~g~~~~f~~ 215 (568)
.++|..+++.+++.+.. ..+||+.|++
T Consensus 135 ~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~ 171 (366)
T TIGR00886 135 GNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVI 171 (366)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcccccccccccchhHH
Confidence 78888777777665543 3489999943
No 82
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.85 E-value=1.8e-24 Score=230.69 Aligned_cols=396 Identities=15% Similarity=0.132 Sum_probs=241.2
Q ss_pred hhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHH
Q 008355 66 TASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVAL 145 (568)
Q Consensus 66 ~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (568)
..++..+...++..++.+++|+++||+ |||++++++.++..++.++.+++... .+.+.+.++|
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~-GRk~~~~~~~~~~~i~~~~~~~~~~~----------------~~~~~~~~~R 109 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRY-GRKPALIISALLMIIGSILIAFAPSY----------------NNFWMLLIGR 109 (451)
T ss_pred HHHHHHHHHHhhhcccccccccccccc-cccccccccccccccccccccccccc----------------cccccccccc
Confidence 467889999999999999999999999 99999999999999999999888210 1678899999
Q ss_pred HHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheecc---ccchhhhhHHHHHHHH
Q 008355 146 YLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMN---VGWGWGFGIPAVAMAI 222 (568)
Q Consensus 146 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~---~g~~~~f~~~~~~~~~ 222 (568)
++.|++.|+..+..+.++.|..|++. |++..++.+....+|..++..++-.+... .+||..+++.++..++
T Consensus 110 ~~~G~~~g~~~~~~~~~~~E~~~~~~------R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~ 183 (451)
T PF00083_consen 110 FLIGFGIGGAYVVSPIYISEIAPPKH------RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLL 183 (451)
T ss_pred cccccccccccccccccccccccccc------cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999998 99999999999999999988766544333 3599998887766544
Q ss_pred HHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhcc
Q 008355 223 AVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQ 302 (568)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 302 (568)
.++.. ..+||+|+|+..++++|++++..+++...+.... +....+..
T Consensus 184 ~~~~~--------------------------------~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~-~~~~~~~~ 230 (451)
T PF00083_consen 184 VLLLR--------------------------------FFLPESPRWLLSKGRDEEAEKVLRKLRGKEIEDE-EIEEIKAE 230 (451)
T ss_pred ccccc--------------------------------cccccccceecccccccccccccccccccccccc-cccccccc
Confidence 33322 1368899999999988888877766433211110 00000000
Q ss_pred ccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHH-hhhccccceeEeecccccCCCCCCcccCchh-hccccchh
Q 008355 303 TDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFA-TVYSQMSTMFVLQGNTMDQHMGPNFKIPSAS-LSLFDTLS 380 (568)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 380 (568)
.++.+..+..|++..+++ +.+++++..+.+........ .....+.+.+... .+ ..+.. .+....+.
T Consensus 231 ~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~-------~~----~~~~~~~~~~~~~~ 298 (451)
T PF00083_consen 231 KKESQESKASWRDLFRNK-KYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN-------AG----ISNSFLATLILGLV 298 (451)
T ss_pred cccccccceeeeeccccc-cccccccccccccccccccccccccccccccccc-------cc----cccccccccccccc
Confidence 000000112233222221 11223222222211111111 0111111111111 11 11111 11111111
Q ss_pred hhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHH-HHHHhhhhhhccCcCCCCCceeehhhHHHHH
Q 008355 381 VIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGI-LEVVRLNIVKRNNYYDIETIPMTIFWQVPQY 459 (568)
Q Consensus 381 ~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 459 (568)
.++...+... +.+|.+|| +.+..+.++++++.+.++. .... .++ +...+...+....
T Consensus 299 ~~~~~~~~~~----~~~~~GRr-------~~~i~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~~~i~~~~ 356 (451)
T PF00083_consen 299 NFLGTLLAIF----LIDRFGRR-------KLLIIGLLLMAICSLILGIIFFLG----------VSS-SSWWSILSIVFLA 356 (451)
T ss_pred cccccccccc----cccccccc-------cccccccccccccccccccccccc----------ccc-ccccccccceeee
Confidence 1111111112 44554433 3456677776666665541 1100 000 0001222222222
Q ss_pred HHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHH
Q 008355 460 FIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWL 539 (568)
Q Consensus 460 ~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 539 (568)
+..........+..+.+..|.+|.+.|+++.|+....+.+++.+++.+.+.+.+... ....|++
T Consensus 357 l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~----------------~~~~~~i 420 (451)
T PF00083_consen 357 LFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG----------------GWGVFLI 420 (451)
T ss_pred ecccccccccccccccccccccccccccccccccccccccccccccccccccccccc----------------ccccchh
Confidence 222233334567778999999999999999999999999999888888776543221 1135778
Q ss_pred HHHHHHHHHHHHHHHhhhceecccccCC
Q 008355 540 LTILSVLNFLVYLWIAKWFTYKKATGRA 567 (568)
Q Consensus 540 ~a~~~~v~~v~~~~~~~~~~~~~~~~~~ 567 (568)
.++++++..+..+++.||+|+++.||.+
T Consensus 421 ~~~~~~i~~i~~~~~lpET~g~~l~ei~ 448 (451)
T PF00083_consen 421 FAGVCLIAIIFVYFFLPETKGKTLEEIQ 448 (451)
T ss_pred hHHHHHHHHhheeEEEeeCCCCCHHHHH
Confidence 8888899988899999999999988754
No 83
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.84 E-value=3.8e-19 Score=185.20 Aligned_cols=156 Identities=15% Similarity=0.152 Sum_probs=116.0
Q ss_pred HHHHHHHHHhC--CChhhhhhhHHH-----HHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 008355 51 NLVNYLQKQLN--QGNVTASNNVTN-----WSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLK 123 (568)
Q Consensus 51 ~l~~yl~~~lg--~s~~~~g~~~~~-----~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~ 123 (568)
+...++.++.. .++.+.+...+. ..+...++.++.|+++||+ |||+++..+.++..++.++++++.+.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~-g~r~~l~~~~~~~~~~~~~~~~~~~~~~~- 91 (394)
T TIGR00883 14 FAAVLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRI-GRKKTLVITLLMMGIGTLLIGLLPSYATI- 91 (394)
T ss_pred HHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhh-hhHHHHHHHHHHHHHHHHHHhhCCChhhh-
Confidence 45556665544 334445544432 2233346889999999999 99999999999999999888877321110
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhhe
Q 008355 124 PSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWI 203 (568)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i 203 (568)
.......+++.|+++|++.+...+....+++|.+|+++ |++..++.+.+..+|..+++.++..+
T Consensus 92 ----------~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~------r~~~~~~~~~~~~~G~~i~~~~~~~~ 155 (394)
T TIGR00883 92 ----------GIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGK------RGFYGSFQQVGAPVGLLLAALTVLLL 155 (394)
T ss_pred ----------HHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCccc------chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00012358889999999999999999999999999988 99999999999999999999877654
Q ss_pred e--------ccccchhhhhHHHHHHHHHH
Q 008355 204 Q--------MNVGWGWGFGIPAVAMAIAV 224 (568)
Q Consensus 204 ~--------~~~g~~~~f~~~~~~~~~~~ 224 (568)
. +.++||+.|++.++..+++.
T Consensus 156 ~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 184 (394)
T TIGR00883 156 SYLLGDDALLEWGWRIPFLVSAVLVLIGL 184 (394)
T ss_pred HHhcCHHHhhccchHHHHHHHHHHHHHHH
Confidence 3 35789999988776555443
No 84
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.84 E-value=3.5e-18 Score=183.73 Aligned_cols=176 Identities=14% Similarity=0.163 Sum_probs=137.4
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhc----cCchHH-HHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSY----MGRFWT-IASF 102 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~----~Grk~~-~~~~ 102 (568)
+|..+.+++..+......+.....+|.|+++ .|.|..++|... ..... .++.++.|.++||+ +||||. +..+
T Consensus 11 ~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~-~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr~~ll~~ 87 (491)
T PRK11010 11 QPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFS-LVGQA-YVFKFLWSPLMDRYTPPFLGRRRGWLLAT 87 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHH-HHHHH-HHHHHHHHHHHHcccccCCCCchHHHHHH
Confidence 4445667777777777777777788888764 699998988862 22222 36899999999997 277775 6677
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhh
Q 008355 103 SIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFF 182 (568)
Q Consensus 103 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (568)
.+..+++...+++.. |. .+.+.+.+.+++.+++.+...+...++..|++|+++ |+++.
T Consensus 88 ~i~~~~~~~~~a~~~--~~--------------~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~------rg~~~ 145 (491)
T PRK11010 88 QLLLLVAIAAMGFLE--PG--------------TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEE------RGAGA 145 (491)
T ss_pred HHHHHHHHHHHHHcC--Cc--------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hHHHH
Confidence 777767766666541 21 457788888999999999999999999999999888 99999
Q ss_pred hhHHHHHHHhHHHhhhhhhheec-cccchhhhhHHHHHHHHHHHHHH
Q 008355 183 NWFYLSINIGALVASSVLVWIQM-NVGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 183 ~~~~~~~~ig~~~~p~~~~~i~~-~~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
++...+.++|..+++.+++++.+ ..|||..|++.++..++..+..+
T Consensus 146 ~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~ 192 (491)
T PRK11010 146 AISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATL 192 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888 57999999998876655544433
No 85
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.84 E-value=6.9e-19 Score=175.88 Aligned_cols=391 Identities=12% Similarity=0.020 Sum_probs=254.4
Q ss_pred CCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHH
Q 008355 26 GNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSII 105 (568)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~ 105 (568)
.+.|+++.- ...+...+..+.+...+.+++.+++|+|..|.+++.....+...+.+++-|.+.||+ |.|++..++.++
T Consensus 11 ~~~~~L~~S-~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drf-GgR~~~~~s~~l 88 (417)
T COG2223 11 IARRNLWLS-TLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRF-GGRKWTILSMLL 88 (417)
T ss_pred chhHHHHHH-HHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc-CchHHHHHHHHH
Confidence 345554443 445555666667778888899999999999999999999999999999999999999 999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
..+-++..+++.+.|+ .+.+++.+++.|++.| ..++..++++++||+++ +|.+.|++
T Consensus 89 ~~IP~~~~~~a~~~~~----------------~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~------qG~AlGI~ 145 (417)
T COG2223 89 LLIPCLGLAFAVTYPS----------------TWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEK------QGLALGIA 145 (417)
T ss_pred HHHHHHHHHHHccCCc----------------hHHHHHHHHHHhcccc-eehcccccccccCChhh------hhHHHHHh
Confidence 9999998888854433 4789999999999865 45678899999999999 99999999
Q ss_pred HHHHHHhHHHhhhhhhheecccc---chhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhccccc
Q 008355 186 YLSINIGALVASSVLVWIQMNVG---WGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVV 262 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~~~g---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (568)
. ..|+|..+...++..+....| |+....+..+..++..++.++..+......+..++..+
T Consensus 146 g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~---------------- 208 (417)
T COG2223 146 G-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP---------------- 208 (417)
T ss_pred c-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch----------------
Confidence 9 889999999998888888888 89888877777777666555543322111111110000
Q ss_pred CCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHH-HHHHHHHHHHHHHhhhHHH
Q 008355 263 PADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVE-ELKAIIRLLPVWASGIVFA 341 (568)
Q Consensus 263 ~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 341 (568)
.+.+.+. +.+.+...+........|-
T Consensus 209 -----------------------------------------------------~~~~~v~~~~~~W~lsllY~~tFG~Fv 235 (417)
T COG2223 209 -----------------------------------------------------AQLKAVFSNKDTWLLSLLYFATFGGFV 235 (417)
T ss_pred -----------------------------------------------------hHHHHHhcCcchHHHHHHHHHHHHHHH
Confidence 0000011 1222222233333333333
Q ss_pred hhhccccceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHH
Q 008355 342 TVYSQMSTMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIF 421 (568)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~ 421 (568)
....+.+.++..+...... ..+.......+...+.-|+.++ +.|| .+..+.....+..+++
T Consensus 236 gfs~~l~~~~~~~fg~~~~--------~Ag~~a~~f~~~g~l~Rp~GG~----LsDR-------~Gg~rv~~~~f~~~~~ 296 (417)
T COG2223 236 GFSAYLPMYLVTQFGLSPV--------TAGLIAFLFPLIGALARPLGGW----LSDR-------IGGRRVTLAVFVGMAL 296 (417)
T ss_pred HHHHHHHHHHHHhcCCChh--------hHHHHHHHHHHHHHHHHhccch----hhhh-------ccchhHHHHHHHHHHH
Confidence 3333333333322211111 1223334344444555555555 3444 4444577777777777
Q ss_pred HHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHH
Q 008355 422 SMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGN 501 (568)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~ 501 (568)
+..+....... + ....+....+..++..++..++.+-..+-.+..+.|+ +-|.+.|+....+.+|+
T Consensus 297 ~~~~l~~~~~~-----------~--~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~-~~G~v~G~vga~G~lGG 362 (417)
T COG2223 297 AAALLSLFLTG-----------F--GHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGG 362 (417)
T ss_pred HHHHHHccccc-----------c--ccCcchHHHHHHHHHHHHHhccCcchheeechHHHHh-hhhHHHHHHHHhccccc
Confidence 77766644311 0 0012333333333444444444444555566666644 67888888888889998
Q ss_pred HHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhce
Q 008355 502 YLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFT 559 (568)
Q Consensus 502 ~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~ 559 (568)
..-|...+...+.++ .+...|+++..+.+++.++.+..+.+.+
T Consensus 363 f~lp~~~g~~~~~tg---------------~~~~~f~~~~~~~~~a~v~~~~~y~r~~ 405 (417)
T COG2223 363 FFLPLAFGVSLDLTG---------------SYTGAFMLLLAFYLVALVLTWALYARRR 405 (417)
T ss_pred cchhHHHHHHHHhcc---------------cHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 888888877766542 3456789999999999988888777653
No 86
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.83 E-value=1.3e-17 Score=175.21 Aligned_cols=167 Identities=16% Similarity=0.128 Sum_probs=132.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhcc----CchH-HHHHHHHHHHHH
Q 008355 35 LGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYM----GRFW-TIASFSIIYCLG 109 (568)
Q Consensus 35 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~----Grk~-~~~~~~~~~~i~ 109 (568)
+...+.....+.....-+|.|+++ .|+|..++|++...... .+..++.|+++||+. |||| .+..+.+..+++
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~ 81 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAAS 81 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHH
Confidence 344555666666677788999985 69999999999766665 689999999999982 5654 788878888777
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHH
Q 008355 110 MTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSI 189 (568)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (568)
...+++.. + ..+.+.+++..++.++..+...++..+++.|++|+++ |+++.++...+.
T Consensus 82 ~~~l~~~~--~--------------~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~------r~~~~~~~~~g~ 139 (402)
T PRK11902 82 IAAMAFCP--P--------------HAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEE------RGAGAAVKVLGY 139 (402)
T ss_pred HHHHHhcC--c--------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhh------hhHHHHHHHHHH
Confidence 77766651 1 1346667777777788888899999999999999988 999999999999
Q ss_pred HHhHHHhhhhhhheecc-ccchhhhhHHHHHHHHHHHH
Q 008355 190 NIGALVASSVLVWIQMN-VGWGWGFGIPAVAMAIAVVF 226 (568)
Q Consensus 190 ~ig~~~~p~~~~~i~~~-~g~~~~f~~~~~~~~~~~~~ 226 (568)
++|..+++.+++++.+. .|||..|++.++..++..+.
T Consensus 140 ~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 140 RLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999888875 59999999877765554443
No 87
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.82 E-value=8.9e-19 Score=180.77 Aligned_cols=145 Identities=16% Similarity=0.154 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 008355 48 MSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCD 127 (568)
Q Consensus 48 ~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 127 (568)
..+.+| .+++++|+|..+.+++.+.+.++..++.++.|+++||+ |||+++.++.+...++.+.+ ..
T Consensus 19 ~~~~lp-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~-~~----------- 84 (355)
T TIGR00896 19 VGPLLP-QIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRF-GEERSVAAGLLLIAAGILIR-SA----------- 84 (355)
T ss_pred CcccHH-HHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-CchHHHHHHHHHHHHHHHHH-Hh-----------
Confidence 334444 56778999999999999999999999999999999999 99999999988877777665 33
Q ss_pred CCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccc
Q 008355 128 KDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNV 207 (568)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~ 207 (568)
++.+.+++.|++.|++.+...+..+.++.|.+| ++ |++++++++.+.++|..+++.+++.+.+..
T Consensus 85 --------~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~ 149 (355)
T TIGR00896 85 --------PGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QR------VGLMTGLYSMALMGGAALAAAATVPLAQHS 149 (355)
T ss_pred --------ccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-ch------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 346778899999999999888888888888886 46 999999999999999999999988887664
Q ss_pred --cchhhhhHHHHHHH
Q 008355 208 --GWGWGFGIPAVAMA 221 (568)
Q Consensus 208 --g~~~~f~~~~~~~~ 221 (568)
+||+.|.+.++..+
T Consensus 150 ~~~w~~~f~~~~~~~~ 165 (355)
T TIGR00896 150 GGHWQQALAWWALPAL 165 (355)
T ss_pred hhhHHHHHHHHHHHHH
Confidence 38988876655433
No 88
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.81 E-value=1.3e-17 Score=175.23 Aligned_cols=171 Identities=13% Similarity=0.126 Sum_probs=137.4
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHH
Q 008355 32 RFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMT 111 (568)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~ 111 (568)
+.+....+...+.+ .+...+.+.+++++|+|..+.|++.+.+.++..++.++.|++.||+ |||+++..+.++++++.+
T Consensus 6 ~~~~~~f~~~G~~~-~~~~~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~-G~r~~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 6 ALITSLFALWGFAN-DITNPMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKL-SYKAGILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHH-HhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHH
Confidence 34444444444444 3444444567889999999999999999999999999999999999 999999999999999988
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHH
Q 008355 112 LLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINI 191 (568)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 191 (568)
++..+... .+++.+++.|++.|+|.|...+...+++.+..|+++ |++..++.+...++
T Consensus 84 l~~~~~~~----------------~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l 141 (410)
T TIGR00885 84 LFWPAAEI----------------MNYTLFLVGLFILTAGLGFLETAANPYILVMGPEST------ATRRLNLAQSFNPF 141 (410)
T ss_pred HHHHHHhh----------------ccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhH------HHHHHHHHHHHHHH
Confidence 76544211 357889999999999999999999999999998887 89999999999999
Q ss_pred hHHHhhhhhhheec--------------------------cccchhhhhHHHHHHHHHHHH
Q 008355 192 GALVASSVLVWIQM--------------------------NVGWGWGFGIPAVAMAIAVVF 226 (568)
Q Consensus 192 g~~~~p~~~~~i~~--------------------------~~g~~~~f~~~~~~~~~~~~~ 226 (568)
|..++|.+++.+.. ..+||++|++.++..++..++
T Consensus 142 G~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~ 202 (410)
T TIGR00885 142 GSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALL 202 (410)
T ss_pred HHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998876632 236999998877655544333
No 89
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.80 E-value=3.6e-18 Score=167.35 Aligned_cols=132 Identities=15% Similarity=0.154 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHHhCC----ChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCC
Q 008355 47 GMSTNLVNYLQKQLNQ----GNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGL 122 (568)
Q Consensus 47 ~~~~~l~~yl~~~lg~----s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~ 122 (568)
.+..++...++...+. +..-.|.+-+.|++.+.+.++..|.++||+ |||+++.+|.+..++...+.+.+
T Consensus 46 ~~~~~~V~~F~~a~~~~~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~y-GRkpvll~c~~~va~s~ll~~~S------ 118 (451)
T KOG2615|consen 46 PFVVFMVRDFNIAIGEPDGASVFYAGFLGSSFSILQFISSPLWGCLSDRY-GRKPVLLACLIGVALSYLLWALS------ 118 (451)
T ss_pred HHHHHhhHHHHHhhCCcccccchhhhhHhhHHHHHHHHhhhhhhhhhhhh-CchHHHHHHHHHHHHHHHHHHHH------
Confidence 3344444444443333 345578999999999999999999999999 99999999999999988888887
Q ss_pred CCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhh
Q 008355 123 KPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVW 202 (568)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~ 202 (568)
.|+..+.+.|++.|+..|-. ....++++|.+++++ |+.+++....+..+|.++||.++|+
T Consensus 119 -------------~~F~afv~aR~l~Gi~kgnl-~v~rAiisdV~sek~------r~l~ms~v~~a~~lGfilGPmIGgy 178 (451)
T KOG2615|consen 119 -------------RNFAAFVLARFLGGIFKGNL-SVIRAIISDVVSEKY------RPLGMSLVGTAFGLGFILGPMIGGY 178 (451)
T ss_pred -------------HHHHHHHHHHHhhhhccCch-HHHHHHHHhhcChhh------ccceeeeeehhhhcchhhcchhhhH
Confidence 56767777899999998865 467899999999988 9999999999999999999999999
Q ss_pred eec
Q 008355 203 IQM 205 (568)
Q Consensus 203 i~~ 205 (568)
+.+
T Consensus 179 la~ 181 (451)
T KOG2615|consen 179 LAQ 181 (451)
T ss_pred HHh
Confidence 987
No 90
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.80 E-value=3.4e-17 Score=172.44 Aligned_cols=442 Identities=12% Similarity=0.039 Sum_probs=250.5
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhh----ccCchHHHHHH-HHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADS----YMGRFWTIASF-SII 105 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr----~~Grk~~~~~~-~~~ 105 (568)
++.+....+..++++-...+++++|++ ++|.+....+++..+..+...+.+|+.|+++|| + ||||.++.+ .+.
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~-~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~-GRRrp~il~g~~~ 83 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQ-ELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRF-GRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCC-CChHHHHHHHHHH
Confidence 566777788888998888888888875 699999999999999999999999999999995 8 999998875 555
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCC--chhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhh
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTG--AQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFN 183 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (568)
.+++..+++.+.++... ..+..++.. ...+..+++..+..++.....+...++++|.+|+++++ ++.+.+
T Consensus 84 ~~~~l~ll~~~~~~~~~----~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~----~~~a~~ 155 (477)
T TIGR01301 84 VAFAVILIGFAADIGHL----FGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR----TRIANA 155 (477)
T ss_pred HHHHHHHHHhCchhhhh----ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH----HHHHHH
Confidence 55666666665332110 000000000 01133444555566788888888899999999988621 367999
Q ss_pred hHHHHHHHhHHHhhhhhhhe--ecc-------------ccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHH
Q 008355 184 WFYLSINIGALVASSVLVWI--QMN-------------VGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIM 248 (568)
Q Consensus 184 ~~~~~~~ig~~~~p~~~~~i--~~~-------------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (568)
+.+...++|..+|+.++++. .+. .+.+..|++.++..++..++..+..+|.+..++++...+
T Consensus 156 ~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~--- 232 (477)
T TIGR01301 156 YFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINS--- 232 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhh---
Confidence 99999999999999988764 111 156788988887777666665544443221110000000
Q ss_pred HHHHHHHhhcccccCCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHH
Q 008355 249 QVIVASFRKSNVVVPADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAII 328 (568)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (568)
..+. .+ +.+..+ .+++..+.-.+-.+.+.
T Consensus 233 --------------------~~~~--~~----------~~~~~~-------------------~~~~i~~~~~~mP~~m~ 261 (477)
T TIGR01301 233 --------------------EAAP--PS----------KHGEEA-------------------FFGELFGAFKYLPRPVW 261 (477)
T ss_pred --------------------hccc--cc----------ccchhh-------------------hHHHHHHHHHHCCHHHH
Confidence 0000 00 000000 00000000001112222
Q ss_pred HHHHHHHhhhHHHhhhccccceeEeecc-cccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCC
Q 008355 329 RLLPVWASGIVFATVYSQMSTMFVLQGN-TMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFT 407 (568)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~ 407 (568)
.+....++.-+.|..+..+.+.+.-+.. ..+....+.++... -+.........+...+.+.++.++.++.+++
T Consensus 262 ~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gv-r~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~----- 335 (477)
T TIGR01301 262 ILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGV-RAGAFGLMLNSVVLGITSIGMEKLCRGWGAG----- 335 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----
Confidence 3333333333333343333332221110 00000000000000 0011111111111123333344456664322
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhh--hhhccCcCCCCCceee-hhhHHHHHHHHHHHHHHHhhhhHHhhhccCCh-
Q 008355 408 QLQRMGIGLLISIFSMVAAGILEVVRLN--IVKRNNYYDIETIPMT-IFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPD- 483 (568)
Q Consensus 408 ~~~~~~~g~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~- 483 (568)
+..-.++.++.++++....+++....+ +.+.++ .--..+.. .+.++..+.+.|+.-.......++++++..|+
T Consensus 336 -k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~ 412 (477)
T TIGR01301 336 -KRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDG--ESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNL 412 (477)
T ss_pred -hhHHHHHHHHHHHHHHHHHHHHhhhhccccccccc--cccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHcccc
Confidence 122367777777777766655421000 000000 00001111 35566677888999999999999999999995
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhce
Q 008355 484 -AMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFT 559 (568)
Q Consensus 484 -~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~ 559 (568)
+..|..+|+.|+.-.+...+.++..|.+.+..+.+. ..++.+-++.++++.+..++..|+.+
T Consensus 413 ~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~--------------~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 413 GAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGN--------------LPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred CCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCC--------------eeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 556999999999999999999988877544432111 23577778888888888888888754
No 91
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.80 E-value=9e-18 Score=173.31 Aligned_cols=156 Identities=12% Similarity=0.119 Sum_probs=119.2
Q ss_pred HHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhc----cCchHHH-HHHHHHHHHHHHHHHHhhhccCCCC
Q 008355 50 TNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSY----MGRFWTI-ASFSIIYCLGMTLLTLTASVSGLKP 124 (568)
Q Consensus 50 ~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~----~Grk~~~-~~~~~~~~i~~~~~~~~~~~~~~~~ 124 (568)
....+.+.+++|+|..+.|+.... .+...+ .++.|.++||+ +||||.+ ..+.+..++....+++... .
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~--~--- 80 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP--S--- 80 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc--c---
Confidence 333344556789999999988654 333333 88999999997 3888874 5666666666656655411 1
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhhee
Q 008355 125 SCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQ 204 (568)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~ 204 (568)
.+.+.++...++.+++.+...++..+++.|++|+++ |+++.++...+.++|..+++.+++.+.
T Consensus 81 -----------~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~------r~~~~~~~~~~~~~G~~~~~~l~~~l~ 143 (356)
T TIGR00901 81 -----------TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEE------LGYGSTIYIVGYRAGMLLSGSLALVLA 143 (356)
T ss_pred -----------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345566666777788888888999999999999888 999999999999999999999999888
Q ss_pred cccc--------chhhhhHHHHHHHHHHHHHHh
Q 008355 205 MNVG--------WGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 205 ~~~g--------~~~~f~~~~~~~~~~~~~~~~ 229 (568)
...| ||..|++.++..+++.+..++
T Consensus 144 ~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~ 176 (356)
T TIGR00901 144 SPEFANTGLITLWGYIFFWTALLILPGLLVTLF 176 (356)
T ss_pred hhcccccccccccHHHHHHHHHHHHHHHHHHHH
Confidence 8888 999999888766665554443
No 92
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.79 E-value=2.6e-18 Score=169.31 Aligned_cols=177 Identities=15% Similarity=0.081 Sum_probs=154.1
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHh-------------------------------------------------C
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQL-------------------------------------------------N 61 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l-------------------------------------------------g 61 (568)
+..+....+.++..+-.+++.+|.|+.+.- +
T Consensus 23 lviv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~ 102 (464)
T KOG3764|consen 23 LVIVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAISLD 102 (464)
T ss_pred EEEEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhccCcc
Confidence 445556667777777777888888875433 3
Q ss_pred CChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHH
Q 008355 62 QGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVT 141 (568)
Q Consensus 62 ~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (568)
-+++++|++.+++.+.+.+..++.|.+.||+ |+|-.+++|..++...++++++. .+.+++
T Consensus 103 ~e~~~iG~LFaskA~~qllvnp~~G~l~~~i-Gy~ipm~~Gl~vmf~sTilFafg-------------------~sy~~l 162 (464)
T KOG3764|consen 103 RENTQIGLLFASKALVQLLVNPFFGNLIDRI-GYKIPMVAGLFVMFLSTILFAFG-------------------NSYPML 162 (464)
T ss_pred ccccchhHHHHHHHHHHHHhcccchhhHHHh-ccccHHHHHHHHHHHHHHHHHHc-------------------chhHHH
Confidence 4567899999999999999999999999999 99999999999999999999998 447789
Q ss_pred HHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHH
Q 008355 142 FVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMA 221 (568)
Q Consensus 142 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~ 221 (568)
+++|.+||+|.+....+..++++|.||+++. |++++|+.-.+..+|-.+||.++|.+.+..|++.+|++.++.++
T Consensus 163 ~vAR~LQgvgsA~~~tsglamlAd~f~~d~e-----r~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~L 237 (464)
T KOG3764|consen 163 FVARSLQGVGSAFADTSGLAMLADVFPEDNE-----RGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLL 237 (464)
T ss_pred HHHHHHhhhhHHHHHhhhHHHHHHHcccchh-----hhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHH
Confidence 9999999999999999999999999998863 99999999999999999999999999999999999999998877
Q ss_pred HHHHHHHhcCc
Q 008355 222 IAVVFFFSGSR 232 (568)
Q Consensus 222 ~~~~~~~~~~~ 232 (568)
+-..+-+++.+
T Consensus 238 ld~~L~l~vi~ 248 (464)
T KOG3764|consen 238 LDGALQLLVIE 248 (464)
T ss_pred HHHHHHHheeC
Confidence 77666555443
No 93
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.78 E-value=2.7e-17 Score=178.74 Aligned_cols=383 Identities=13% Similarity=0.084 Sum_probs=229.5
Q ss_pred HHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCch
Q 008355 58 KQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQ 137 (568)
Q Consensus 58 ~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (568)
+..+.+.....+..+++.++..+++++.|.++||+ |||++++++.++.+++.+..+++ .|
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~-GRk~~~~~~~~~~~i~~~~~a~a-------------------~~ 170 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRF-GRKPVLLVSLLLFIIFGILTAFA-------------------PN 170 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhc-ccHHHHHHHHHHHHHHHHHHHHh-------------------Cc
Confidence 45666778889999999999999999999999997 99999999999999999999988 67
Q ss_pred hHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccccchhhhhHHH
Q 008355 138 TAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVGWGWGFGIPA 217 (568)
Q Consensus 138 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~ 217 (568)
++.+++.|++.|++.++...+...+++|++++++ |+.+..+ ......++.++|.+++++.. +||+.+++..
T Consensus 171 ~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~------R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~ 241 (521)
T KOG0255|consen 171 YWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQ------RGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIIS 241 (521)
T ss_pred HHHHHHHHHHHHhhccchhHHhHhhheeecCcch------hhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHH
Confidence 9999999999999999999999999999999999 9999999 88888888899998988877 8999999887
Q ss_pred HHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhhhhhhhhhhccCccccCC-----ccch
Q 008355 218 VAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYETADEECNIQGSRKLEST-----SKFK 292 (568)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~-----~~~~ 292 (568)
+..++.++..++ .||+|+|+..+++.+++.+..+++.+. ....
T Consensus 242 ~~~~~~~~~~~l--------------------------------~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~ 289 (521)
T KOG0255|consen 242 IPSGLFLLLWFL--------------------------------PPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKE 289 (521)
T ss_pred HHHHHHHHHHHc--------------------------------cCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHH
Confidence 766655544222 224444444444443333322222110 0000
Q ss_pred hhhhhhhhccccccCCCC-CCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhccccceeEeecccccCCCCCCcccCch
Q 008355 293 FFDKAAVETQTDRVKGSA-DPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMSTMFVLQGNTMDQHMGPNFKIPSA 371 (568)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (568)
..+.............++ ..+.+..+.+ +.++++....... ..+...+... .+. ...++ ....
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~l~~~~~~~~~~~---~~~~~~y~gl--~~~------~~~lg----~~~~ 353 (521)
T KOG0255|consen 290 LLRLELLLRPLKLLFTEPKISFLDLFRTP-RLRYRTLYLLFIW---FVFSLVYYGL--SLN------VSGLG----GNIY 353 (521)
T ss_pred HHHHHHHhhHhhhhccCCCCchhhhhcCH-HHHHHHHHHHHHH---HHHhHHHHhh--hhh------hhhcC----chHH
Confidence 000000000000000000 0111111111 1122222111111 0011111110 000 00011 1111
Q ss_pred hhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceee
Q 008355 372 SLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMT 451 (568)
Q Consensus 372 ~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (568)
..+......-.... ... ....++ .+++.....+..+..+++++.++.... ..
T Consensus 354 ~~~~~~~~~~~p~~-~~~---~~~~~~-------~gR~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~ 405 (521)
T KOG0255|consen 354 LNFTLSGLVELPAY-FRN---GLLLPE-------FGRRPPLFLSLFLAGIGLLLFGWLPDD-----------------LG 405 (521)
T ss_pred HHHHHHHHHHhhHH-HHH---HHHHHH-------hCcHHHHHHHHHHHHHHHHHHHHhhcc-----------------ch
Confidence 11111111111111 111 112233 334456778888888888887776522 11
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccc
Q 008355 452 IFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRG 531 (568)
Q Consensus 452 ~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~ 531 (568)
.+.......+..++....+...+.+..|+.|+..|..+.+..+....+|.+++|.+......... ..
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~~~~-----~~-------- 472 (521)
T KOG0255|consen 406 GWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQMFP-----LL-------- 472 (521)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-----cc--------
Confidence 12233333444455555565669999999999999999999999999999999888764432110 00
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhceecc
Q 008355 532 HLDYFYWLLTILSVLNFLVYLWIAKWFTYKK 562 (568)
Q Consensus 532 ~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~~ 562 (568)
.+..++..+.+...+...+.|+++.+.
T Consensus 473 ----~~~~~~~~~~l~~~~~~~~lpet~~~~ 499 (521)
T KOG0255|consen 473 ----GLILFGWLALLLGLLSLLLLPETKGKP 499 (521)
T ss_pred ----hHHHHHHHHHHHHHHHHhcCcccCCCC
Confidence 112246667777666767888877654
No 94
>PRK09669 putative symporter YagG; Provisional
Probab=99.78 E-value=7.1e-17 Score=171.85 Aligned_cols=178 Identities=12% Similarity=0.078 Sum_probs=125.4
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhh----ccCc-hHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADS----YMGR-FWTIASFSII 105 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr----~~Gr-k~~~~~~~~~ 105 (568)
.+.--++.+..+..+..+..+++.|+++.+|++..++|.+..+..+...+..|+.|+++|| + || |+.++.+.+.
T Consensus 11 ~~~yg~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~-Grrrp~il~~~~~ 89 (444)
T PRK09669 11 KIGYGLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRH-GQFRPYLLWFAIP 89 (444)
T ss_pred HHhhcchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCC-CCcchhHHHHHHH
Confidence 3444566677777777788899999999999999999999999999999999999999999 5 77 4556667677
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCC-CCchhhhhhhhhhhh
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDE-TDDGEREKKSSFFNW 184 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~ 184 (568)
.++...++... |.. ........+++..++.+.+......+..++.+|+.+. ++ |.+..++
T Consensus 90 ~~i~~~l~f~~---p~~----------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~e------R~~l~~~ 150 (444)
T PRK09669 90 FGVVCLLTFYT---PDF----------GATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRE------RHSLQSW 150 (444)
T ss_pred HHHHHHHHHhC---CCC----------CcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHH------HHHHHHH
Confidence 76666554433 210 0112345555555666666666777778899998854 44 8988888
Q ss_pred HHHHHHHhHHHhhhhhhheec-------cccchhhhhHHHHHHHHHHHHHH
Q 008355 185 FYLSINIGALVASSVLVWIQM-------NVGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 185 ~~~~~~ig~~~~p~~~~~i~~-------~~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
.....++|..+++.+...+.. ..+|+..+.+.+++.++..+..+
T Consensus 151 r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~ 201 (444)
T PRK09669 151 RFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCF 201 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHh
Confidence 888888888887765433322 24677666666655444444333
No 95
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.78 E-value=2.3e-16 Score=164.00 Aligned_cols=383 Identities=13% Similarity=0.153 Sum_probs=211.8
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHH
Q 008355 34 ILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLL 113 (568)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~ 113 (568)
+....++..+.+-...++++.|+++ .|+|..|+|.+.+...+...+.+++.|+++||...+||.+.+..++.++.....
T Consensus 7 Ls~~~f~~f~~~G~~~p~~~~~L~~-~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~ 85 (400)
T PF03825_consen 7 LSLMYFLYFFAYGAFLPYLPLYLES-RGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLL 85 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHH
Confidence 3444455555555677899999985 789999999999999999999999999999998456777777766666655555
Q ss_pred HHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhH
Q 008355 114 TLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGA 193 (568)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~ 193 (568)
... .+++.+++..++..+......|...++.-+...+ +++-+|-..+..++|.
T Consensus 86 ~~~-------------------~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~~--------~~~~YG~iRlwGSiGf 138 (400)
T PF03825_consen 86 AFS-------------------SSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLGD--------RGKDYGRIRLWGSIGF 138 (400)
T ss_pred HHh-------------------ccHHHHHHHHHHHHHHHccHHHHHHHHHHHHccc--------ccCCCCcchhhhhHHH
Confidence 444 3456666666677777777777777777666552 3333455555556666
Q ss_pred HHhhhh-hhheecccc---chhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhh
Q 008355 194 LVASSV-LVWIQMNVG---WGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLL 269 (568)
Q Consensus 194 ~~~p~~-~~~i~~~~g---~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 269 (568)
+++... ++.+....+ ....+++.+...++.....+. .++.+.++..+++.++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~-lp~~~~~~~~~~~~~~----------------------- 194 (400)
T PF03825_consen 139 IVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALF-LPKTPPKRSAKESVKK----------------------- 194 (400)
T ss_pred HHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHh-CCCCccccccCCCccc-----------------------
Confidence 655433 222222222 233455544333222222222 2211100000000000
Q ss_pred hhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhccccc
Q 008355 270 YETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMST 349 (568)
Q Consensus 270 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (568)
....+. ++ -.++++.....+..++..... ..+..+.+
T Consensus 195 ---------------------~~~~~~----------------~~-----llk~~~~~~Fll~~~l~~~~~-~~~~~f~~ 231 (400)
T PF03825_consen 195 ---------------------LLGLDA----------------LK-----LLKNPRFLVFLLAAFLIGISH-AAYYTFFS 231 (400)
T ss_pred ---------------------ccchHH----------------HH-----HhcCccHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 000000 00 001111111111111112111 11222222
Q ss_pred eeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHH
Q 008355 350 MFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGIL 429 (568)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~ 429 (568)
.+..+. + ++. ...... ....+.+.+-...-..+|..+| .+..+.+.++.+..++-...++..
T Consensus 232 ~yl~~~-------g-g~~--~~~~g~-----~~~l~~~aEi~~f~~~~~~~~r---~g~~~ll~~a~~~~~vR~~l~a~~ 293 (400)
T PF03825_consen 232 IYLQEL-------G-GYS--GSTIGI-----LWALGVVAEIPFFFFSGRFLKR---FGIKWLLLLALVAYAVRWLLYAYF 293 (400)
T ss_pred HHHHHc-------c-cch--hhHHHH-----HHHHHHHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHh
Confidence 221111 1 110 000110 1111112222222233444443 677788899999988888877755
Q ss_pred HHHhhhhhhccCcCCCCCceeehhh----HHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHH-HHHHHHHHH
Q 008355 430 EVVRLNIVKRNNYYDIETIPMTIFW----QVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLT-TVAVGNYLS 504 (568)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~----~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~-~~~lg~~lg 504 (568)
.. +.+. +.....+.|+..++...+...|+.+.+|++.|++++++++. ..++|+.+|
T Consensus 294 ~~-------------------~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG 354 (400)
T PF03825_consen 294 SD-------------------PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIG 354 (400)
T ss_pred cC-------------------CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHH
Confidence 21 2222 22223568999999999999999999999999999999885 478999999
Q ss_pred HHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008355 505 TLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWF 558 (568)
Q Consensus 505 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~ 558 (568)
+.++|++.+..+.+..- .+..++.+.+++.++..+++++..|++
T Consensus 355 ~~igG~l~~~~g~~~~~----------~~~~~~~v~a~~~~~~~~~f~~~fk~~ 398 (400)
T PF03825_consen 355 SLIGGWLYDAFGARGMF----------DWSAVFLVFAVMALVILVLFVILFKPK 398 (400)
T ss_pred HHHHHHHHHHhcchhhh----------hHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 99999998765322111 123455566666666666666665543
No 96
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.77 E-value=2.5e-18 Score=172.24 Aligned_cols=405 Identities=13% Similarity=0.053 Sum_probs=214.3
Q ss_pred CChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHH
Q 008355 62 QGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVT 141 (568)
Q Consensus 62 ~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (568)
+++...+.++.+..++..+++++.||++||+ |||+++-..+++..++++.+++....+. ...-+..+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~-GRK~vYG~~liImIi~t~~~~~s~~~~~------------~~~~m~~L 147 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKF-GRKKVYGKELIIMIICSALSGLSVGTTS------------PLGVMMTL 147 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhh-cchhhhhHHHHHHHHHHHHhccCCCCCC------------CcchhhHH
Confidence 5566788999999999999999999999999 9999999999999999987766522111 22456789
Q ss_pred HHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH----HHHHHHhHHHhhhhhhheecc-----------
Q 008355 142 FVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF----YLSINIGALVASSVLVWIQMN----------- 206 (568)
Q Consensus 142 ~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~----~~~~~ig~~~~p~~~~~i~~~----------- 206 (568)
...|+++|+|.|+-+|...+..+|..-.+. ||...+.. .++.-.|++++-++.+.....
T Consensus 148 ~~~R~~LGiGIGGDYPlSAtI~SE~an~~~------RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld 221 (538)
T KOG0252|consen 148 CFFRFLLGIGIGGDYPLSATIMSESANKKT------RGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLD 221 (538)
T ss_pred HHHHHHhhccccCCCcchHHHhhhhhhhcc------ccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHH
Confidence 999999999999999999999999887777 87776653 444444555544444333221
Q ss_pred ccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhhhhhh--hhhhccCcc
Q 008355 207 VGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYETADE--ECNIQGSRK 284 (568)
Q Consensus 207 ~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~ 284 (568)
.=||..|.+.++..++. +.+.. .+||++++....+++ ...+...++
T Consensus 222 ~vWRl~~glg~vpa~~~---ly~Rl-----------------------------~M~Et~~Y~al~~~~~~~a~~d~~k~ 269 (538)
T KOG0252|consen 222 GVWRIIFGLGAVPALLV---LYFRL-----------------------------KMPETARYTALVSKKLKQAAGDMKKV 269 (538)
T ss_pred HHHHHHHHHHHHHHHHH---HHhhh-----------------------------cCCcchhHHHHhhcCHhhhhhccccc
Confidence 12888777666543322 22211 122222221111100 000001111
Q ss_pred ccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhccccceeEeecccccCCCCC
Q 008355 285 LESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMSTMFVLQGNTMDQHMGP 364 (568)
Q Consensus 285 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (568)
++. ...+.. .. +....+.+.....-.....+. ....++.....++......++.-..|....+ .++
T Consensus 270 ~~~----~~~~~~------~~-~~~~~~~~~~~~~F~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig- 335 (538)
T KOG0252|consen 270 LSV----DIEAES------TA-ESDVPPPSNSFGLFSRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIG- 335 (538)
T ss_pred ccc----ccchhh------cc-ccCCCCcccccchHHHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHHHHHHH-hhc-
Confidence 111 000000 00 000001000000001111111 1111122222222222222221111211111 000
Q ss_pred CcccCchhh-----ccccchhhhhhhhh-hhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 008355 365 NFKIPSASL-----SLFDTLSVIFWAPI-YDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLNIVK 438 (568)
Q Consensus 365 ~~~~~~~~~-----~~~~~~~~i~~~~l-~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~ 438 (568)
+.-..... .+.........+.+ .-++..-+.++.+ +.+.-+.|+.++++.+++++..-.+
T Consensus 336 -~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iG-------Rk~iq~~GF~~~~i~~~~~~~~y~~------ 401 (538)
T KOG0252|consen 336 -VIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIG-------RKYIQLMGFFIMTIFFFVIAGPYNQ------ 401 (538)
T ss_pred -cCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhh-------hHHHHHhhHHHHHHHHHHHcCCccc------
Confidence 00000000 11111111222222 1111112344433 3345677888888888777643210
Q ss_pred ccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccC
Q 008355 439 RNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKN 518 (568)
Q Consensus 439 ~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~ 518 (568)
.. ......+...+...++.-.-..+...+.+|.+|.+.||++.|++-..+..|.++|......+.+..
T Consensus 402 -------~~--~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~--- 469 (538)
T KOG0252|consen 402 -------LE--NTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN--- 469 (538)
T ss_pred -------cc--ccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc---
Confidence 01 111112222222334444445667778899999999999999999999999999988777664421
Q ss_pred CCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhceecccccC
Q 008355 519 GKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFTYKKATGR 566 (568)
Q Consensus 519 ~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~~~~~~ 566 (568)
+|. ..+....+++++++++++.++.++ .||+++|++||.
T Consensus 470 -----yp~---~~g~~~v~~i~~~~~~~gi~~T~l-~pEtk~~~leei 508 (538)
T KOG0252|consen 470 -----YPP---NIGVRNVFIILAGCMLLGILFTLL-IPETKGKSLEEI 508 (538)
T ss_pred -----CCc---cccchHHHHHHHHHHHHhHheeEE-eecccccCHHHh
Confidence 111 223456789999999999877654 559999887764
No 97
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.77 E-value=2e-16 Score=169.70 Aligned_cols=368 Identities=8% Similarity=-0.012 Sum_probs=213.8
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhh----hccCc-hHHHHHHHHHH
Q 008355 32 RFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLAD----SYMGR-FWTIASFSIIY 106 (568)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laD----r~~Gr-k~~~~~~~~~~ 106 (568)
+.--++.+..++.+..+.++++.|+++.+|++...+|.+..+.-+...+..|+.|+++| |+ || |+.++.+.+.+
T Consensus 9 ~~yg~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~-Grrrp~il~g~i~~ 87 (473)
T PRK10429 9 LSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRW-GKFKPWILIGTLAN 87 (473)
T ss_pred HhhccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCC-CCcchhHhhhhHHH
Confidence 44456677788888888899999999999999999999999999999999999999999 77 87 66777777777
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCC-CCCchhhhhhhhhhhhH
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFD-ETDDGEREKKSSFFNWF 185 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~-~~~~~~~~~r~~~~~~~ 185 (568)
+++..++... |.. ........+++..++.+++.........++.+|+.+ ++| |.+..++.
T Consensus 88 ~i~~~llf~~---p~~----------~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~e------R~~l~~~~ 148 (473)
T PRK10429 88 SVVLFLLFSA---HLF----------EGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKRE------REQLVPYP 148 (473)
T ss_pred HHHHHHHHcC---CCC----------CccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHH------HHHHHHHH
Confidence 7776665433 210 001123344555556677787888888899999985 555 99999987
Q ss_pred HHHHHHhHHHhhhhhhheec-------cccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhc
Q 008355 186 YLSINIGALVASSVLVWIQM-------NVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKS 258 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~-------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (568)
....++|+.+.+.+...+.. ..+|+....+.++..++..+..+...++... +++.++.
T Consensus 149 ~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~-~~~~~~~-------------- 213 (473)
T PRK10429 149 RFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYS-SDNQVSA-------------- 213 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCC-ccccccc--------------
Confidence 77778877666555443221 1245555444444444333333332222110 0000000
Q ss_pred ccccCCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhh
Q 008355 259 NVVVPADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGI 338 (568)
Q Consensus 259 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (568)
..++ .++++..+.-.++ |.+...+...+...
T Consensus 214 ----------------------------~~~~--------------------~~~~~~~~~~~~n-~~~~~ll~~~~~~~ 244 (473)
T PRK10429 214 ----------------------------EGSH--------------------LTLKDIVALIYKN-DQLSCLLGMALAYN 244 (473)
T ss_pred ----------------------------cccC--------------------CCHHHHHHHHhcC-HHHHHHHHHHHHHH
Confidence 0000 0000000000011 22222222222222
Q ss_pred HHHhhhccccceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHH
Q 008355 339 VFATVYSQMSTMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLI 418 (568)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l 418 (568)
...........++..+... +.. ..+.+.....+..++..++..+ +.+| .++++.+.++.++
T Consensus 245 ~~~~~~~~~~~y~~~y~~~-~~~-------~~~~~~~~~~i~~ii~~~~~~~----l~~r-------~gkk~~~~~~~~~ 305 (473)
T PRK10429 245 IASNIINGFAIYYFTYVIG-DAD-------LFPYYLSYAGAANLVTLILFPR----LVKS-------LSRRILWAGASIF 305 (473)
T ss_pred HHHHHHhhheeeEEEEECC-CHH-------HHHHHHHHHHHHHHHHHHHHHH----HHHH-------cCcHHHHHHHHHH
Confidence 2222323333333332211 000 0112222233344444444443 4555 3444556666666
Q ss_pred HHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCC-------hhhHHHHHH
Q 008355 419 SIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAP-------DAMRSLCSA 491 (568)
Q Consensus 419 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P-------~~~rg~~~g 491 (568)
..++.+........ .+.+.+.+++..++.+++.+...+..+++..|..+ ++..|...|
T Consensus 306 ~~~~~~~~~~~~~~---------------~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s 370 (473)
T PRK10429 306 PVLSCGVLLLMGLA---------------APHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYS 370 (473)
T ss_pred HHHHHHHHHHHhcc---------------CchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHH
Confidence 55554443322100 01134455556677888899888888999999976 556777999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcc
Q 008355 492 LSLTTVAVGNYLSTLLVTIVTKVTTK 517 (568)
Q Consensus 492 ~~~~~~~lg~~lg~~l~~~i~~~~~~ 517 (568)
..++...+|..+++.+.+.+.+..+.
T Consensus 371 ~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 371 VQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999999998877654
No 98
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.76 E-value=4.9e-17 Score=167.06 Aligned_cols=157 Identities=13% Similarity=0.029 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHHHhCCChhh-hhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 008355 47 GMSTNLVNYLQKQLNQGNVT-ASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPS 125 (568)
Q Consensus 47 ~~~~~l~~yl~~~lg~s~~~-~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 125 (568)
...++..+|+.+++|++..+ .|.+.+++..++.++.+++|+++||+ |.|+++.++.+.+++..++++++
T Consensus 43 ~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrl-G~K~vL~l~~l~Wsl~t~L~~fa--------- 112 (511)
T TIGR00806 43 PGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYL-RYKPVLVLQALSFVCVWLLLLLG--------- 112 (511)
T ss_pred chHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHH---------
Confidence 34466778999999999999 99999999999999999999999999 99999999999999999999998
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheec
Q 008355 126 CDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQM 205 (568)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~ 205 (568)
.+...+.+.|++.|++.|... +...++..++|+++ |+++.++.+.+.++|.+++++++++ ..
T Consensus 113 ----------~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE------R~ratsi~~sg~~vG~~Ia~~L~ql-l~ 174 (511)
T TIGR00806 113 ----------TSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR------YQRAAAYSRAAVLLGVFLSSVLGQL-LV 174 (511)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 447889999999999999999 99999999999998 9999999999999999999999998 55
Q ss_pred cccchhhhh---HHHHHHHHHHHHHHhcC
Q 008355 206 NVGWGWGFG---IPAVAMAIAVVFFFSGS 231 (568)
Q Consensus 206 ~~g~~~~f~---~~~~~~~~~~~~~~~~~ 231 (568)
.+||++-+. +......+++++.++.+
T Consensus 175 s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 175 TLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred hcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 689886553 34444555555544443
No 99
>PRK09848 glucuronide transporter; Provisional
Probab=99.76 E-value=7.1e-16 Score=164.37 Aligned_cols=365 Identities=10% Similarity=0.016 Sum_probs=198.3
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhc---cCchH-HHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSY---MGRFW-TIASFSIIY 106 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~---~Grk~-~~~~~~~~~ 106 (568)
.+.-.+..+..+..+....++++.|+++.+|++..++|.+.+...+...+..++.|+++||. +|||| .+..+.+..
T Consensus 10 ~~~yg~g~~~~~~~~~~~~~~l~~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~ 89 (448)
T PRK09848 10 IVGYSLGDVANNFAFAMGALFLLSYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPL 89 (448)
T ss_pred HHhhccchHHhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHH
Confidence 34445677778888888888999999999999999999999999999999999999999995 26666 445555555
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY 186 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (568)
.+...++... |.-. ......+..++..++.+++.+...++..++..++.+..++ |.+..++..
T Consensus 90 ~~~~~~~~~~---~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~-----r~~~~~~r~ 152 (448)
T PRK09848 90 MIFSVLVFWV---PTDW---------SHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQS-----RARLGAARG 152 (448)
T ss_pred HHHHHHHHhC---cCCC---------CcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHH-----HHHHHHHHH
Confidence 5444433211 1000 0011233344455667888888888888887777655331 777766554
Q ss_pred HH-----HHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccc
Q 008355 187 LS-----INIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVV 261 (568)
Q Consensus 187 ~~-----~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (568)
++ .+++..++|.+.+.........+..+. .+..+++.+..+......++..+++.+.....+....
T Consensus 153 ~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~-------- 223 (448)
T PRK09848 153 IAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWT-IVLAIAGMVLYFICFKSTRENVVRIVAQPSLKISLQT-------- 223 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHH-HHHHHHHHHHHHHHHcCcEeccCCCccCCCHHHHHHH--------
Confidence 43 345666667665543221111111111 1111222221111111111100000000000000000
Q ss_pred cCCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHH
Q 008355 262 VPADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFA 341 (568)
Q Consensus 262 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (568)
....|.+........+....+
T Consensus 224 -----------------------------------------------------------l~~n~~f~~~~~~~~~~~~~~ 244 (448)
T PRK09848 224 -----------------------------------------------------------LKRNRPLFMLCIGALCVLIST 244 (448)
T ss_pred -----------------------------------------------------------HhCCchHHHHHHHHHHHHHHH
Confidence 000111111111111111111
Q ss_pred hhhccccceeEeecccccCCCCCCcccCchhhcccc-chhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHH
Q 008355 342 TVYSQMSTMFVLQGNTMDQHMGPNFKIPSASLSLFD-TLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISI 420 (568)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~ 420 (568)
........++.....+.+.. ...+...+ .+..++..++..+ +.+| .++++.+.+|.++..
T Consensus 245 ~~~~~~~~~~~~~~~g~~~~--------~~~~~~~~~~~~~~~~~~l~~~----l~~r-------~g~~~~~~~g~~~~~ 305 (448)
T PRK09848 245 FAVSASSLFYVRYVLNDTGL--------FTVLVLVQNLVGTVASAPLVPG----MVAR-------IGKKNTFLIGALLGT 305 (448)
T ss_pred HHHhhhheeeEeeecCChHH--------HHHHHHHHHHHHHHHHHHHHHH----HHHH-------hCcHHHHHHHHHHHH
Confidence 12222223333221111000 01111111 1222333333333 4444 445567788888877
Q ss_pred HHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChh-------hHHHHHHHH
Q 008355 421 FSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDA-------MRSLCSALS 493 (568)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~-------~rg~~~g~~ 493 (568)
++.+.+..... .+.+..+...++.++|+++..+..++...|..|.+ .+|...|++
T Consensus 306 i~~~~~~~~~~------------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~ 367 (448)
T PRK09848 306 CGYLLFFWVSV------------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLF 367 (448)
T ss_pred HHHHHHHHcCc------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHH
Confidence 77665543210 14445555677889999999999999999998754 569999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhcc
Q 008355 494 LTTVAVGNYLSTLLVTIVTKVTTK 517 (568)
Q Consensus 494 ~~~~~lg~~lg~~l~~~i~~~~~~ 517 (568)
++...+|..+|+.+.+.+.+..+.
T Consensus 368 ~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 368 SFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999988776643
No 100
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.76 E-value=9.9e-17 Score=176.65 Aligned_cols=198 Identities=16% Similarity=0.172 Sum_probs=150.9
Q ss_pred CcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHH
Q 008355 27 NWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIY 106 (568)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~ 106 (568)
++|.+++.+....+.+....++.......++++++++..+.|++.+.+.+++.++.++.|+++||+ ||||.+.++.+++
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~g~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~-~r~~~i~~g~ll~ 108 (633)
T TIGR00805 30 KIKVFSLLLTCAQLQGLLYNGLVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKL-HRPIVIGIGCAIM 108 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhccc-CcceEEEecHHHH
Confidence 345444444445555556666777777788999999999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHHHHhhhccC-C----------------CCCCCCC------------CCCC-C--CchhHHHHHHHHHHHhhccc
Q 008355 107 CLGMTLLTLTASVSG-L----------------KPSCDKD------------ACHP-T--GAQTAVTFVALYLIALGTGG 154 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~-~----------------~~~~~~~------------~~~~-~--~~~~~~~~~~~~l~g~g~g~ 154 (568)
+++.+++++.+.+.. + ..-|+.. .|.+ . ...+..++++|+++|+|.+.
T Consensus 109 ~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~ 188 (633)
T TIGR00805 109 GLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATP 188 (633)
T ss_pred HHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCc
Confidence 999999887642210 0 0011100 0111 1 12456788999999999999
Q ss_pred CcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccc----------------------cchhh
Q 008355 155 IKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNV----------------------GWGWG 212 (568)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~----------------------g~~~~ 212 (568)
..+...+++.|++|+++ |++.+++++.+..+|+.+|+++++++.+.+ +|+..
T Consensus 189 ~~~~~~~~i~d~~~~~~------~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~ 262 (633)
T TIGR00805 189 IFPLGISYIDDFAKSKN------SPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIG 262 (633)
T ss_pred chhcCchhhhccCCccc------cHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHH
Confidence 99999999999999998 999999999999999999999999877532 26777
Q ss_pred hhHHHHHHHHHHHHHHhcC
Q 008355 213 FGIPAVAMAIAVVFFFSGS 231 (568)
Q Consensus 213 f~~~~~~~~~~~~~~~~~~ 231 (568)
|++.+++.++..+.++...
T Consensus 263 Fli~g~l~~l~~v~l~~~p 281 (633)
T TIGR00805 263 FLICGGVALLTSIPFFFFP 281 (633)
T ss_pred HHHHHHHHHHHHHHHHhCc
Confidence 8777765555544444433
No 101
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.74 E-value=5.5e-16 Score=150.99 Aligned_cols=432 Identities=11% Similarity=0.040 Sum_probs=244.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHH
Q 008355 36 GNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTL 115 (568)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~ 115 (568)
................+.+-++..+|.+..+..++......+..++....|.++|++ |||+.+....+...+.-.+-+.
T Consensus 84 g~gwmad~m~~m~~s~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~-grr~~f~~T~l~t~v~~~is~~ 162 (528)
T KOG0253|consen 84 GMGWMADAMEMMLLSLILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTI-GRRKGFNLTFLVTGVFGVISGA 162 (528)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhh-hcchhhhhhHHHHHHHHHhhcC
Confidence 333344444445555566677888999988999999999999999999999999999 9999998887766665555554
Q ss_pred hhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHH
Q 008355 116 TASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALV 195 (568)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 195 (568)
+ +|+..+.+.|.+.|+|.|+ .|...++-.|..|..+ |....=.. ....+|.++
T Consensus 163 s-------------------pnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~------r~~~~V~~-~~waig~v~ 215 (528)
T KOG0253|consen 163 S-------------------PNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSH------RWLLTVMS-FFWAIGQVF 215 (528)
T ss_pred C-------------------CCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcC------CCcchhHH-HHHHHHHHH
Confidence 4 6788899999999999999 8899999999999887 77665555 677888888
Q ss_pred hhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhhhhhh
Q 008355 196 ASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYETADE 275 (568)
Q Consensus 196 ~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 275 (568)
...+.-....++||||..........++....++.....|..-.++++.+ .+..+....+....++|........+++.
T Consensus 216 ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~k-AletL~kiArmNg~qlplgvl~~s~~~~~ 294 (528)
T KOG0253|consen 216 EALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYK-ALETLHKIARMNGKQLPLGVLESSAIDRQ 294 (528)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHH-HHHHHHHHHHhcCCCCCcceeeeehhhhh
Confidence 87777667778899998777665555555444444443343333444332 23333444444455566544444444433
Q ss_pred hhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhh-------hcccc
Q 008355 276 ECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATV-------YSQMS 348 (568)
Q Consensus 276 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 348 (568)
|+.+... |+.+.+..++. ...-+.+ -..+-+|+.+.+...++...+.+.. ..|..
T Consensus 295 e~e~~~~------------~~~~~~a~ke~----rg~~~nL--lsp~lrkttlllw~iwfgnafsyyg~VLlttelfqsg 356 (528)
T KOG0253|consen 295 EQEESDL------------DDSKSSAAKEV----RGGTTNL--LSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELFQSG 356 (528)
T ss_pred hhhhhch------------hhhhhcccccc----ccchHhh--cChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcc
Confidence 3322211 11111111100 0000000 0112344444333333322222111 11111
Q ss_pred c---ee-EeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHH
Q 008355 349 T---MF-VLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMV 424 (568)
Q Consensus 349 ~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~ 424 (568)
. .+ -..+...............+... .+..-+...-...+...+.+|++|| +.|...++++++..+
T Consensus 357 d~c~~~~r~~p~e~e~~~~c~~s~~~dYrd---llitslaefPGlLIt~~iverlGRK-------kTMal~l~~f~iflf 426 (528)
T KOG0253|consen 357 DACPLYNRFLPTELETRANCPLSVAKDYRD---LLITSLAEFPGLLITGVIVERLGRK-------KTMALSLILFGIFLF 426 (528)
T ss_pred CccccchhcchhHHHhhhcCCccchhHHHH---HHHHHHhhCCchhHHHHHHHHhcch-------hHHHHHHHHHHHHHH
Confidence 1 00 00000011100000000011111 1111111111111111245554444 357777777766655
Q ss_pred HHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHH
Q 008355 425 AAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLS 504 (568)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg 504 (568)
...... +.....+.++..-......+...+.|..|.+|...|+++.|....++.+|+++.
T Consensus 427 ll~~c~--------------------~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~ 486 (528)
T KOG0253|consen 427 LLTTCK--------------------TRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFS 486 (528)
T ss_pred HHHHhc--------------------CcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhh
Confidence 544332 111122222333344455566789999999999999999999999999999999
Q ss_pred HHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhceecc
Q 008355 505 TLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFTYKK 562 (568)
Q Consensus 505 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~~ 562 (568)
|++. +..+... . ..-++++++++++.+...++-.|+|+|.
T Consensus 487 p~iA-~~~e~s~------s-----------l~i~vy~~~~ilagIavcffPiEtkGR~ 526 (528)
T KOG0253|consen 487 PVIA-MRAELST------S-----------LPIFVYGALFILAGIAVCFFPIETKGRS 526 (528)
T ss_pred hHHH-HHhccce------e-----------ehHHHHHHHHHHHHHHheeeeeccCCCC
Confidence 9888 3322111 0 1235667888888777777777888775
No 102
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.74 E-value=1.2e-15 Score=159.70 Aligned_cols=177 Identities=10% Similarity=-0.083 Sum_probs=120.4
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhh--HHHHHHHHHhhhhhH-HHHhhhccCchHHHHHHHHHH-
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNN--VTNWSGTCYITPLIG-AFLADSYMGRFWTIASFSIIY- 106 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~--~~~~~~~~~i~~~~~-G~laDr~~Grk~~~~~~~~~~- 106 (568)
.+.++...+...+.+....+.+|.|++ +.|.|..++|.. .....+...+..|+. ++.+||+ ||||..++...+.
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~-~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~-g~r~~~i~~~~~~~ 80 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLR-EDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRL-GRRRSWVLPMQCLV 80 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CcchhHHHHHHHHH
Confidence 455666777888887888888998886 579999999997 355677777777777 6689998 9999876654332
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY 186 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (568)
++....+... .+. ......++....+.++..+...+...++..|..++++ ++...+...
T Consensus 81 ~~~~~~~~~~--~~~-------------~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~------~~~~~~~~~ 139 (390)
T TIGR02718 81 SACLASLALV--GPD-------------VAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRT------LAKGNAVQI 139 (390)
T ss_pred HHHHHHHHcC--Ccc-------------hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhh------hhHHHHHHH
Confidence 2122222211 011 0112233344444556666666666666677666665 777777888
Q ss_pred HHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhc
Q 008355 187 LSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSG 230 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~ 230 (568)
.+..+|..+|+.+.+++.+.+|||..|++.++..++..+..+..
T Consensus 140 ~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~ 183 (390)
T TIGR02718 140 AGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWL 183 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 88899999999888899999999999999887766555544433
No 103
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.74 E-value=1e-15 Score=152.23 Aligned_cols=150 Identities=17% Similarity=0.134 Sum_probs=125.1
Q ss_pred hHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHH
Q 008355 33 FILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTL 112 (568)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~ 112 (568)
++...-|+.........-.+.+.+++.++++..+++.+..++..++.++.++.|++.+|+ |+|+.++.|+.++++|+.+
T Consensus 16 v~~t~lFfl~G~~~~l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~-gyk~gi~lgL~l~avg~~l 94 (422)
T COG0738 16 VLLTSLFFLWGFITCLNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKL-GYKAGIVLGLLLYAVGAAL 94 (422)
T ss_pred HHHHHHHHHHHHHhhcchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHh-hhHHHHHHHHHHHHHHHHH
Confidence 333333333333334455677789999999999999999999999999999999999999 9999999999999999998
Q ss_pred HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHh
Q 008355 113 LTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIG 192 (568)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 192 (568)
+.-++.. .++..++++.++.+.|.+...++..++++.+.++++ -..-+++.+..+.+|
T Consensus 95 F~pAa~~----------------~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~------a~~rlnl~q~fn~lG 152 (422)
T COG0738 95 FWPAASS----------------KSYGFFLVALFILASGIGLLETAANPYVTLLGKPES------AAFRLNLAQAFNGLG 152 (422)
T ss_pred Hhhhhhh----------------hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh------HHHHHHHHHHhhhhH
Confidence 8644221 457889999999999999999999999999999876 555678888899999
Q ss_pred HHHhhhhhhheec
Q 008355 193 ALVASSVLVWIQM 205 (568)
Q Consensus 193 ~~~~p~~~~~i~~ 205 (568)
+.++|++++++..
T Consensus 153 a~~gp~~g~~lil 165 (422)
T COG0738 153 AILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987766
No 104
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.72 E-value=4.6e-16 Score=164.77 Aligned_cols=362 Identities=13% Similarity=0.114 Sum_probs=225.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhh----hccCchH-HHHHHHHHHHHHHH
Q 008355 37 NECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLAD----SYMGRFW-TIASFSIIYCLGMT 111 (568)
Q Consensus 37 ~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laD----r~~Grk~-~~~~~~~~~~i~~~ 111 (568)
+.+..++.+.....+++.|+.+.+|+++..+|.+..+..+..++..|+.|+++| |+ |||| .+++|.+..+++..
T Consensus 9 g~~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~-Grrrp~~l~g~i~~~~~~~ 87 (428)
T PF13347_consen 9 GDLGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRW-GRRRPWILIGAILLALSFF 87 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccc-cccceEeehhhHHHHHHHH
Confidence 356677777777789999999999999999999999999999999999999999 78 7655 55567777788777
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHH
Q 008355 112 LLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINI 191 (568)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 191 (568)
++... .|.- .........+++..++..++......+..++.+|+.+.+++ |.+..++......+
T Consensus 88 llf~~--~p~~---------~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~-----R~~l~~~~~~~~~~ 151 (428)
T PF13347_consen 88 LLFSP--PPAG---------LSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDE-----RTRLSSWRMIFSMI 151 (428)
T ss_pred Hhhcc--ccch---------hhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhh-----hhhHHHHHHHHHHH
Confidence 76643 0100 00011234456666677889999999999999999985432 99999998888888
Q ss_pred hHHHhhhhhhheeccc-------cchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCC
Q 008355 192 GALVASSVLVWIQMNV-------GWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPA 264 (568)
Q Consensus 192 g~~~~p~~~~~i~~~~-------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (568)
|..+...+.+.+.+.. +|++..++.++..++..+......++.+++.+++++..
T Consensus 152 g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~~~~------------------- 212 (428)
T PF13347_consen 152 GSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQEKKI------------------- 212 (428)
T ss_pred HHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeecccccccccccc-------------------
Confidence 8876666665554322 57777776666555555554444333111111100000
Q ss_pred cchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhh
Q 008355 265 DKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVY 344 (568)
Q Consensus 265 ~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (568)
++ .+.++... ++ |.+...+....+....+...
T Consensus 213 ---------------------------~~----------------~~~~~~~~----~n-r~~~~l~~~~~~~~~~~~~~ 244 (428)
T PF13347_consen 213 ---------------------------SL----------------RDSLRSLF----RN-RPFRILLLAFFLQWLAFALM 244 (428)
T ss_pred ---------------------------cc----------------ccchhhhc----cc-chHHHHHHHHHHHHhhhhhh
Confidence 00 00000000 11 11111111111111111111
Q ss_pred ccccceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHH
Q 008355 345 SQMSTMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMV 424 (568)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~ 424 (568)
.....++.......+. ..+.+.....+..++..++..+ +.||. ++++.+..+.++.+++.+
T Consensus 245 ~~~~~y~~~~vl~~~~--------~~~~~~~~~~~~~~v~~~~~~~----l~~r~-------gk~~~~~~~~~~~~~~~~ 305 (428)
T PF13347_consen 245 NTFLPYYFTYVLGNEG--------LISIFMLIFFVASIVGSPLWGR----LSKRF-------GKKKVYIIGLLLAALGFL 305 (428)
T ss_pred hhHHHHHHHHHhcCch--------hhHHHHHHHHHHHHHHHHHHHH----HHHHc-------cceeehhhhHHHHHHHHH
Confidence 1111122111111110 1112222333444445555444 55664 333467788888888887
Q ss_pred HHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCC-------hhhHHHHHHHHHHHH
Q 008355 425 AAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAP-------DAMRSLCSALSLTTV 497 (568)
Q Consensus 425 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P-------~~~rg~~~g~~~~~~ 497 (568)
+..+... .+.++..+..++.+++.+...+..++...|..+ ++..|...|++++..
T Consensus 306 ~~~~~~~------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~ 367 (428)
T PF13347_consen 306 LLFFLGP------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFI 367 (428)
T ss_pred HHHHHHh------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhh
Confidence 7766542 266777888899999999999999999999887 355799999999999
Q ss_pred HHHHHHHHHHHHHhhhhhccCC
Q 008355 498 AVGNYLSTLLVTIVTKVTTKNG 519 (568)
Q Consensus 498 ~lg~~lg~~l~~~i~~~~~~~~ 519 (568)
.++..+++.+.+.+.+..+.+.
T Consensus 368 k~~~~la~~i~g~~l~~~Gy~~ 389 (428)
T PF13347_consen 368 KIGQGLAGAIVGLLLALVGYDA 389 (428)
T ss_pred HHHHHHHHHHHHHHHHHhCcCC
Confidence 9999999999998887765443
No 105
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.72 E-value=2.5e-16 Score=161.02 Aligned_cols=392 Identities=9% Similarity=0.031 Sum_probs=221.7
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.++.+......+...+++-...++++.+++++.|+|..++|.+.++..+...+.+|+.|.++||+ |.||-++....+..
T Consensus 6 ~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dkl-g~kK~Ll~~i~~l~ 84 (412)
T PF01306_consen 6 NKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKL-GLKKHLLWFIAILL 84 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHC-TTCSHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchh-hhhHHHHHHHHHHH
Confidence 44567777777777888888889999999999999999999999999999999999999999999 86665544332222
Q ss_pred --HHHHHH-HHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccC----cccccccccccCCCCCchhhhhhhh
Q 008355 108 --LGMTLL-TLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGI----KPCVSSFGADQFDETDDGEREKKSS 180 (568)
Q Consensus 108 --i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~----~~~~~~~~~~~~~~~~~~~~~~r~~ 180 (568)
.+.... ... |.+. .| ++++.++.++..+.. .|...+++.+.... .+-
T Consensus 85 ~l~~pff~~v~~---pll~------------~n---~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~--------~~f 138 (412)
T PF01306_consen 85 LLFGPFFIYVFG---PLLQ------------SN---FWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRR--------NGF 138 (412)
T ss_dssp HTCHHHHHHTHH---HHHH------------TT----HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHH--------HSS
T ss_pred HHHHHHHHHHHH---HHHH------------HH---HHHHHHHHHHHHHHHHcccchHHHHHHHHHHHH--------hcC
Confidence 122111 111 1000 11 233333333333333 33333333322110 222
Q ss_pred hhhhHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhccc
Q 008355 181 FFNWFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNV 260 (568)
Q Consensus 181 ~~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (568)
=+|-..+..++|..++..++|.+.+ .+-+..||+.....++..++....+++..++.+..+..
T Consensus 139 eYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~---------------- 201 (412)
T PF01306_consen 139 EYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADAL---------------- 201 (412)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTS----------------
T ss_pred CcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhccc----------------
Confidence 2355677889999999999998876 46678888766555444444444433211111000000
Q ss_pred ccCCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHh-hhH
Q 008355 261 VVPADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWAS-GIV 339 (568)
Q Consensus 261 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 339 (568)
. .+.++.+.-|. .+....++......+... ...
T Consensus 202 --------------~----------~~~~~~~~~~~----------------------~~l~k~~~fw~~~l~v~g~~~~ 235 (412)
T PF01306_consen 202 --------------G----------AKKDKVSLKDV----------------------LSLFKMRNFWFFVLFVIGVAAI 235 (412)
T ss_dssp --------------S----------S------HHHH----------------------HHHTTSHHHHHHHHHHHHHHHH
T ss_pred --------------c----------cCCCCCcHHHH----------------------HHHhcchhHHHHHHHHHHHHHH
Confidence 0 00000000000 001111223223333333 334
Q ss_pred HHhhhccccceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHH
Q 008355 340 FATVYSQMSTMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLIS 419 (568)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~ 419 (568)
+....+|.+.++..+.. +.. .....+...+.+.+++ -.+.-.+..++.+| .++++.+.++..++
T Consensus 236 Y~vfdqqf~~y~~~~f~--~~~------~g~~~~G~l~s~~v~~-E~~~m~~~p~li~r-------ig~k~~Lllag~i~ 299 (412)
T PF01306_consen 236 YDVFDQQFPIYFASFFQ--SAG------QGNQMYGYLWSVQVFL-EALMMFFSPWLINR-------IGAKNLLLLAGVIM 299 (412)
T ss_dssp HHHHHHHHHHHHHHTSS--SHH------HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-------H-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhc--ccc------cChhHHhHHHHHHHHH-HHHHHHHHHHHHHh-------cChHhHHHHHHHHH
Confidence 44444554444332211 000 1111122222111111 11111111224555 55666788888888
Q ss_pred HHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHH-HHHHH
Q 008355 420 IFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALS-LTTVA 498 (568)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~-~~~~~ 498 (568)
++-....+..+ +++++.+.-.+.++-..+...+..-|+.+.+|++..++...+. ++..+
T Consensus 300 ~iRi~~~~~~~--------------------~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~ 359 (412)
T PF01306_consen 300 AIRIIGSGFAT--------------------NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQ 359 (412)
T ss_dssp HHHHHHHHT----------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHH
T ss_pred HHHHHHHhhhc--------------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHH
Confidence 88877777554 6677777888999999899999999999999999999999985 68899
Q ss_pred HHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhceec
Q 008355 499 VGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFTYK 561 (568)
Q Consensus 499 lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~ 561 (568)
+|..+.+.+.|.+.|..+ ++..|++++++.+...++.++..++.++.
T Consensus 360 ~~~~i~s~~~G~lyd~~G----------------~~~tylimg~iv~~~~li~~f~l~~~~~~ 406 (412)
T PF01306_consen 360 IGIIILSPLAGYLYDRIG----------------FQHTYLIMGLIVLPFTLISAFTLKKDKKQ 406 (412)
T ss_dssp HHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHHHHHS--SSST
T ss_pred HHHHHHhhhHHhhHhhcC----------------cHHHHHHHHHHHHHHHHHheeeecCCCcc
Confidence 999999999999887652 34578899999888888777777765553
No 106
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.72 E-value=2.9e-15 Score=160.05 Aligned_cols=150 Identities=15% Similarity=0.211 Sum_probs=122.4
Q ss_pred HHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCC
Q 008355 51 NLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDA 130 (568)
Q Consensus 51 ~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 130 (568)
....++.+++|-+ ....|+..+..+...+..++.|.++|.+ |||..++.+.++..+|.++++.+
T Consensus 65 ~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlf-GRr~~~i~g~~l~vvG~Iv~atA-------------- 128 (599)
T PF06609_consen 65 SILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLF-GRRYFFIIGSLLGVVGSIVCATA-------------- 128 (599)
T ss_pred HHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHh-cchHHHHHHHHHHHhHHHHhhcC--------------
Confidence 4456788889865 5678888899999999999999999999 99999999999999999999988
Q ss_pred CCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccccch
Q 008355 131 CHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVGWG 210 (568)
Q Consensus 131 ~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g~~ 210 (568)
++...++++..+.|+|.|... .....++|..|.+. |..+.++......+....+|.++..+..+.+||
T Consensus 129 -----~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~------R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WR 196 (599)
T PF06609_consen 129 -----QNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKW------RGLGLAIASIPFIITTWISPLIAQLFAAHSGWR 196 (599)
T ss_pred -----CcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccch------hhhHhHHHHHHHHhhhcccHHHHHHhccCCCcc
Confidence 567889999999999977665 45666899999877 887777766666566667777776666667899
Q ss_pred hhhhHHHHHHHHHHHHHH
Q 008355 211 WGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 211 ~~f~~~~~~~~~~~~~~~ 228 (568)
|.|++.++...+++++.+
T Consensus 197 w~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 197 WIFYIFIIWSGIALVLIF 214 (599)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 999998877666654433
No 107
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.71 E-value=8.6e-15 Score=156.34 Aligned_cols=379 Identities=15% Similarity=0.103 Sum_probs=214.9
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccC-----chHHHHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMG-----RFWTIASFSI 104 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~G-----rk~~~~~~~~ 104 (568)
.+.++....+...+. +.+...++.++++++|+|..+++...+...+...+-. +.|.++||+ + ||+.+.++.+
T Consensus 27 ~~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~-l~g~l~D~~-~i~G~rRr~~l~~~~~ 103 (468)
T TIGR00788 27 VLAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKP-FAGVMSDTF-PLFGYTKRWYLVLSGL 103 (468)
T ss_pred HHHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhc-CCCCccchHHHHHHHH
Confidence 344555567777777 8888888999999999999999888888888777744 599999999 7 7777777765
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhh
Q 008355 105 IYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNW 184 (568)
Q Consensus 105 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (568)
+.. ......++. +. .......+.+++.+++.+....+..+++.|..+ ++++ .++...++
T Consensus 104 l~~-~~~~~~l~~--~~--------------~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~---~~~~~~s~ 162 (468)
T TIGR00788 104 LGS-AILYGLLPG--KV--------------SSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPS---AGPSLVSW 162 (468)
T ss_pred HHH-HHHHHhccc--cc--------------chHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCC---cCCCeeeH
Confidence 542 122222220 10 123334447788899999999999999999998 4421 13445566
Q ss_pred HHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeee-cCCCCChhHHHHHHHHHHHhhcccccC
Q 008355 185 FYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRI-QKPGGSPLTRIMQVIVASFRKSNVVVP 263 (568)
Q Consensus 185 ~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (568)
.+...++|..+|+.++|.+.+.++|+..|++.++..++..+...+.++ .++ ..|+..+...
T Consensus 163 ~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~~~~~~E-~~~~~~~~~~~~~~----------------- 224 (468)
T TIGR00788 163 MWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFVSNLSKE-RRAFVRPRIGTYLE----------------- 224 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHhccc-ccccccccccccch-----------------
Confidence 666778999999999999999999999999887766666443333322 210 1111000000
Q ss_pred CcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhh
Q 008355 264 ADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATV 343 (568)
Q Consensus 264 ~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (568)
.... ...........+. ++... +....+.+...+.+.+.. +...
T Consensus 225 -----~~~~-----------~~~~~~~~~~~~~----------------~~~l~--~~l~~~~i~~~l~fifl~--~~~~ 268 (468)
T TIGR00788 225 -----MNMA-----------LLTLGVLANVKVQ----------------ILGLR--GAIQLLEIAKPLIFIFLS--YANL 268 (468)
T ss_pred -----hhhh-----------hhhhhHHHHHHHH----------------HHHHH--HHHhcHHHHHHHHHHHHH--Hhhc
Confidence 0000 0000000000000 00000 000011111111111110 1111
Q ss_pred hccccceeEeecccccCCCCCCcccCchh---hccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHH
Q 008355 344 YSQMSTMFVLQGNTMDQHMGPNFKIPSAS---LSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISI 420 (568)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~ 420 (568)
.....+.+..+.. .++ .++.. +.....+..++...+.++ +.+| .+.++.+.++.++.+
T Consensus 269 ~~~~~~~f~~~~~----~lG----~s~~~~G~~~~~~~v~~i~g~~~~~~----~~~~-------~~~r~~l~~~~~l~~ 329 (468)
T TIGR00788 269 PGASGSVFCATTQ----CLP----GGPSFSGMSKVVGNLGSLCGVGGYDR----FLKT-------FPYRLLFGVTTLLYT 329 (468)
T ss_pred CCCCceeEEEEcc----cCC----CCcchhhhHHHHHHHHHHHHHHHHHH----HHhh-------CCHHHHHHHHHHHHH
Confidence 1112122211111 112 11222 222222333333333322 3333 566667777777777
Q ss_pred HHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHH
Q 008355 421 FSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVG 500 (568)
Q Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg 500 (568)
++.+....... +.+. .....+.+++....++.+++.++...+...++.+..|++.+|+..|+.+...++|
T Consensus 330 ~~~~~~~~l~~-~~~~---------~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg 399 (468)
T TIGR00788 330 LSSLFDLILVK-RWNL---------AFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLG 399 (468)
T ss_pred HHHhCceeeee-cccc---------ccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHH
Confidence 76544321110 0000 0000122344555677888888888888999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhh
Q 008355 501 NYLSTLLVTIVTKVT 515 (568)
Q Consensus 501 ~~lg~~l~~~i~~~~ 515 (568)
..+++.+++.+.+..
T Consensus 400 ~~v~~~~gg~l~~~~ 414 (468)
T TIGR00788 400 SSVSGFLGVLLMETI 414 (468)
T ss_pred HHHHHHHHHHHHHHc
Confidence 999999999887654
No 108
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.68 E-value=4.1e-15 Score=158.53 Aligned_cols=425 Identities=13% Similarity=0.090 Sum_probs=249.9
Q ss_pred ehhHhhHHHHHHHHHHHHHHHH---HHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNL---VNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l---~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
-|++++..++.+...+++.... -..++++++.+..+++|+.++......+..|+.+.+.||+ |.|.+.++|.++.+
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rf-g~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRF-GCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhc-CchHHHHHHHHHHH
Confidence 3677777777777777665433 3456778999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHH-HHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVAL-YLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY 186 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (568)
+|.++..++ .+.+.+++.. ++.|+|.|........+++.+|+++ |+.+.|+-.
T Consensus 123 ~g~~lssF~-------------------~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-------R~lA~Gia~ 176 (509)
T KOG2504|consen 123 LGLLLSSFA-------------------TSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-------RALATGIAV 176 (509)
T ss_pred HHHHHHHHH-------------------hhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-------HHHHHhhhh
Confidence 999999998 4466666554 4569999999999999999888764 899999999
Q ss_pred HHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcc
Q 008355 187 LSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADK 266 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (568)
.+..+|..+=|.+..++.+.+|||+.+++.+.+.+-.++.....++.....++. ...+.-. .....+ ..
T Consensus 177 ~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~--~~~~~~~--------~~~~~~-~~ 245 (509)
T KOG2504|consen 177 SGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN--EEKDLRN--------SAASVE-ST 245 (509)
T ss_pred ccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch--hhhhhcc--------cccccc-cc
Confidence 999999999999999999999999999987766655555444444432222221 0000000 000000 00
Q ss_pred hhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcc-c---chhhHHHHHHHHHHHHHHHhhhHHHh
Q 008355 267 SLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRL-C---TVTQVEELKAIIRLLPVWASGIVFAT 342 (568)
Q Consensus 267 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (568)
....+....+ +...... .........+...++. ...+.+. . ..+..+++.-+...+...+....+..
T Consensus 246 ~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~ 316 (509)
T KOG2504|consen 246 PKPVELRISE------RDSGLKK-LSLSNLATLKRGPDKW--RNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNV 316 (509)
T ss_pred cccccccccc------CCCCCCc-ccccchhhhhhCCccc--cccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHH
Confidence 0000000000 0000000 0000000000000000 0001000 0 00111111111111111111111111
Q ss_pred hhccccceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHH
Q 008355 343 VYSQMSTMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFS 422 (568)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~ 422 (568)
.+..++.+.. ....+.. ..+.+.++..+.-++.-++.+. +.++.. .+......+++++++++
T Consensus 317 p~~~l~~~~~--~~g~~~~-------~aa~l~Siigi~~i~gRi~~G~----laD~~~-----~~~~~~~~~~ll~~gl~ 378 (509)
T KOG2504|consen 317 PFVYLPSYAK--SLGLSSN-------DAAFLLSIIGVSDIIGRIILGL----LADKPG-----IRALVLFLLTLLIAGLA 378 (509)
T ss_pred HHHHHHHHHh--hcCCChh-------hhHHHHHHHHHhhhhhhhhhhh----hcCccc-----cchHHHHHHHHHHHHHH
Confidence 1111111111 0111111 1122223333333344444443 233311 22344556666666666
Q ss_pred HHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHH
Q 008355 423 MVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNY 502 (568)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~ 502 (568)
.++..... +++.++...+++|+..+...........|+.+.+.-..+.|+..+...++..
T Consensus 379 ~~~~p~~~--------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l 438 (509)
T KOG2504|consen 379 RLFLPFAT--------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGAL 438 (509)
T ss_pred HHHHHHhc--------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHH
Confidence 65554443 5667777788889988888887778999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHh
Q 008355 503 LSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIA 555 (568)
Q Consensus 503 lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~ 555 (568)
+||.+.+.+.|.++ +|+..|+..+++.+++.+.++...
T Consensus 439 ~gpPiag~~~d~tg---------------~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 439 VGPPIAGLLYDITG---------------NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred cCcccceeeeeccC---------------CeeeehhhcChHHHHHHHHHHHhH
Confidence 99999997665442 234557777777777766555544
No 109
>PTZ00207 hypothetical protein; Provisional
Probab=99.67 E-value=7.6e-14 Score=150.21 Aligned_cols=175 Identities=14% Similarity=0.057 Sum_probs=128.5
Q ss_pred CCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHH
Q 008355 26 GNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSII 105 (568)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~ 105 (568)
++|..+...++...+.. ..|++.. ....+++++|++..+.+++.++.. ...++.++.|+++||+ |||+++.++.++
T Consensus 25 ~Rw~~lva~~~~~~~~g-~~y~fsv-~s~~L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~-G~R~vllig~ll 100 (591)
T PTZ00207 25 RRFALLVLGAFCSICTS-FMYAFNL-ISGAMQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYL-GPRPIFVLSMTV 100 (591)
T ss_pred chHHHHHHHHHHHHHHH-HHHHHHH-HHHHHHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHh-CcHHHHHHHHHH
Confidence 34544444444444433 3344443 444678899999999998887643 3446777899999999 999999999999
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
+.+++++++++.+. . ...+.+.+++.|++.|+|.+...+....++.++|| ++ ||++.++.
T Consensus 101 ~~iG~ll~ala~~~-~------------i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~------RG~a~Gi~ 160 (591)
T PTZ00207 101 FCLGTLLFALTFQE-V------------IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN------RGAVVAIM 160 (591)
T ss_pred HHHHHHHHHHHhcc-c------------ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh------hHHHHHHH
Confidence 99999999886210 0 01368889999999999999998888899999997 55 99999999
Q ss_pred HHHHHHhHHH-hhhhhhheeccccchhhhhHHHHHHHHHHHH
Q 008355 186 YLSINIGALV-ASSVLVWIQMNVGWGWGFGIPAVAMAIAVVF 226 (568)
Q Consensus 186 ~~~~~ig~~~-~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~ 226 (568)
..+.++|+.+ +++..+++. .+|+..|++.++..++..++
T Consensus 161 ~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll 200 (591)
T PTZ00207 161 KTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGIL 200 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHH
Confidence 9999999975 555555554 35777777666554444333
No 110
>PRK11462 putative transporter; Provisional
Probab=99.66 E-value=4.7e-14 Score=150.48 Aligned_cols=179 Identities=11% Similarity=0.122 Sum_probs=127.2
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhc---cCch-HHHHHHHHHHH
Q 008355 32 RFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSY---MGRF-WTIASFSIIYC 107 (568)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~---~Grk-~~~~~~~~~~~ 107 (568)
+.--++.+..++.+..+..++..|+.+.+|+++..+|.+..+.-+..++.-|+.|+++||. +||| +.++++.+.++
T Consensus 12 ~~Yg~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~ 91 (460)
T PRK11462 12 IGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFG 91 (460)
T ss_pred HhhccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHH
Confidence 4455677777888888888999999999999999999999999999999999999999973 3775 45556767777
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++.+++... |.. ........+++.-++..++.........++.+|+.+..++ |++..++...
T Consensus 92 i~~~llf~~---p~~----------s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~e-----Rt~l~s~r~~ 153 (460)
T PRK11462 92 IVCVLAYST---PDL----------SMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQ-----RISLQSWRFV 153 (460)
T ss_pred HHHHHHHhC---CCC----------CcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHH-----HHHHHHHHHH
Confidence 777666543 210 0111233445555566778888888888999999875432 9999999999
Q ss_pred HHHHhHHHhhhhhhheeccc-------cchhhhhHHHHHHHHHHHHHH
Q 008355 188 SINIGALVASSVLVWIQMNV-------GWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~-------g~~~~f~~~~~~~~~~~~~~~ 228 (568)
+.++|..+++.+...+.... +|+....+.+++.++...+.+
T Consensus 154 ~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~ 201 (460)
T PRK11462 154 LATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCF 201 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999888877765443322 455554444444333333333
No 111
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.65 E-value=4.3e-14 Score=138.68 Aligned_cols=327 Identities=16% Similarity=0.165 Sum_probs=219.1
Q ss_pred HHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 008355 50 TNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKD 129 (568)
Q Consensus 50 ~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 129 (568)
..+..-+++++|+|.+.+|...+...++..+..++..+++.|+ |.++.+..++++.++|.++=...
T Consensus 32 gPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~-g~er~l~~~Llli~~G~~iR~~~------------- 97 (395)
T COG2807 32 GPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRF-GEERSLFLALLLIAAGILIRSLG------------- 97 (395)
T ss_pred hhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hhHHHHHHHHHHHHHHHHHHhcc-------------
Confidence 3445567889999999999999999999999999999999999 99999999999988888775543
Q ss_pred CCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccc-c
Q 008355 130 ACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNV-G 208 (568)
Q Consensus 130 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~-g 208 (568)
+...++.+-.+.|.|.+......++.+-+.||++ -+..+++|....++|+.+++.+...+.++. |
T Consensus 98 -------~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-------~~~mtglYs~sl~~~aaLaa~lavpla~~~~g 163 (395)
T COG2807 98 -------GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-------VGLMTGLYSTSLGAGAALAAALAVPLAQHSGG 163 (395)
T ss_pred -------cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-------hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhcc
Confidence 3667899999999999999999999999999976 488899999999999999999998888877 7
Q ss_pred chhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhhhhhhhhhhccCccccCC
Q 008355 209 WGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYETADEECNIQGSRKLEST 288 (568)
Q Consensus 209 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~ 288 (568)
|+....+-+...+++++..+.-.. +++.+..+.. .. +
T Consensus 164 W~~aL~~WAl~allAl~~WlPq~~--r~~~~~~~~~----------------~~------------------------~- 200 (395)
T COG2807 164 WRGALGFWALLALLALLIWLPQAL--REQAASIATK----------------LV------------------------S- 200 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcc--cccccccccc----------------cc------------------------c-
Confidence 999988777777666655433211 1100000000 00 0
Q ss_pred ccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhccccceeEeecccccCCCCCCccc
Q 008355 289 SKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMSTMFVLQGNTMDQHMGPNFKI 368 (568)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (568)
+..-|+ ++..+...+.+-+-...+|....+++.++.++.. +..
T Consensus 201 --------------------~~~vw~--------~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~--sa~------- 243 (395)
T COG2807 201 --------------------VRKVWR--------SPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGL--SAA------- 243 (395)
T ss_pred --------------------cccccc--------CchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC--CHH-------
Confidence 011121 0111111222233455666777777776655432 111
Q ss_pred Cchhhccccchhhhhhhhhhhhhhhh-hhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCC
Q 008355 369 PSASLSLFDTLSVIFWAPIYDIVIVP-FARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIET 447 (568)
Q Consensus 369 ~~~~~~~~~~~~~i~~~~l~~~~~~~-~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (568)
..+.+-++..+..+... +..| +.+|. .+.+.......+++.++++.+.+...+
T Consensus 244 ~aG~llsl~~l~~~~~~-----ll~P~la~R~------~n~r~~~~~~~~~~l~G~~G~~~~P~~--------------- 297 (395)
T COG2807 244 EAGSLLSLMQLAQLPTA-----LLIPLLARRS------KNQRPLVVLALLLMLVGLVGLLLAPGQ--------------- 297 (395)
T ss_pred HhhhHHHHHHHHHHHHH-----HHHHHHHHHh------cccchHHHHHHHHHHHHHHHHHHhhhh---------------
Confidence 11112111112222222 2222 34442 223334555566666666655443321
Q ss_pred ceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 008355 448 IPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAP-DAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTT 516 (568)
Q Consensus 448 ~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P-~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~ 516 (568)
.++ +. .++.|+|.+..+|....++...++ ++..+...|+.+..+.+=..+||.+.|.+.|.++
T Consensus 298 ---~~~-lw--~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g 361 (395)
T COG2807 298 ---LPI-LW--ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG 361 (395)
T ss_pred ---HHH-HH--HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC
Confidence 222 22 488999999999998888877776 5556677888888888889999999999988765
No 112
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.64 E-value=4.8e-14 Score=148.98 Aligned_cols=149 Identities=15% Similarity=0.149 Sum_probs=127.0
Q ss_pred HHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCch
Q 008355 58 KQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQ 137 (568)
Q Consensus 58 ~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (568)
+++++...+.+.+.++|.++++++.+++|.+.||+ .-.+.+....+.+.+..++.... .|
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~-~ls~~l~~~~~~w~~~~~~~~~~-------------------~s 133 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRF-PLSKGLSVSGILWGLFGFLTAAV-------------------HS 133 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHH-------------------hh
Confidence 56778888999999999999999999999999999 87777777777766666555555 56
Q ss_pred hHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhhe------eccccchh
Q 008355 138 TAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWI------QMNVGWGW 211 (568)
Q Consensus 138 ~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i------~~~~g~~~ 211 (568)
.+.+++.|++.|+.++..+|+...+++.++.+++ |+.-+++++...++|.++|+++...+ ....||||
T Consensus 134 ~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e------~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~ 207 (495)
T KOG2533|consen 134 FPGLIALRFLLGLFESGGWPGVVAILGNWYGKSE------RGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRW 207 (495)
T ss_pred hHHHHHHHHHHHHHhcccchHHHHHHHhhcChhh------hhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCcee
Confidence 8889999999999999999999999999999999 99999999999999999999988775 33568999
Q ss_pred hhhHHHHHHHHHHHHHHhcCc
Q 008355 212 GFGIPAVAMAIAVVFFFSGSR 232 (568)
Q Consensus 212 ~f~~~~~~~~~~~~~~~~~~~ 232 (568)
.|++.+++.++..++.++..|
T Consensus 208 ~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 208 LFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred ehhHHHHHHHHHHheEEEEec
Confidence 999999776666555544433
No 113
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.60 E-value=1.1e-12 Score=139.21 Aligned_cols=90 Identities=14% Similarity=0.172 Sum_probs=73.4
Q ss_pred ehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCcc
Q 008355 451 TIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNR 530 (568)
Q Consensus 451 ~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~ 530 (568)
+.+...+.-++.|+..+...+...++..|+.|++.++...|++.+....+.++||++.+.+.+.++.
T Consensus 379 ~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~------------- 445 (477)
T PF11700_consen 379 SPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGS------------- 445 (477)
T ss_pred cHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-------------
Confidence 4444555667899999999999999999999999999999999999999999999999999887642
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHh
Q 008355 531 GHLDYFYWLLTILSVLNFLVYLWIA 555 (568)
Q Consensus 531 ~~~~~~f~~~a~~~~v~~v~~~~~~ 555 (568)
.+.-+..+.++.+++.++++.+.
T Consensus 446 --~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 446 --QRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred --chhHHHHHHHHHHHHHHHHhhcc
Confidence 23446777777888877664433
No 114
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.58 E-value=1.2e-14 Score=156.58 Aligned_cols=178 Identities=14% Similarity=0.115 Sum_probs=129.9
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
++.....+...++.++.+|++..++|.|+++.+|++..+.++......++..++.++.|+++||+ |||+.+..+.+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-grr~~~~~~~~~~~ 327 (490)
T PRK10642 249 WRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRF-GRRPFVILGSVALF 327 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHH
Confidence 34444444445667788999999999999988999988888888888888999999999999999 99999888776544
Q ss_pred HHHHH-HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH
Q 008355 108 LGMTL-LTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY 186 (568)
Q Consensus 108 i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (568)
++... .....+ .+...+++++++.+++.+...+....++.+.+|++. |++++++.+
T Consensus 328 ~~~~~~~~~~~~-----------------~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~------Rg~~~g~~~ 384 (490)
T PRK10642 328 VLAIPAFILINS-----------------NVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHI------RYSALAAAF 384 (490)
T ss_pred HHHHHHHHHHhC-----------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcc------chHHHHHHH
Confidence 43332 222211 235667778888888777666777888889999998 999999844
Q ss_pred HHHHHhHHHhhhhhhheecccc-chhhhhHHHHHHHHHHHHHHh
Q 008355 187 LSINIGALVASSVLVWIQMNVG-WGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~~~~~~~~~ 229 (568)
....+++.++|.+.+++.+..+ |+.++++..+..+++++..++
T Consensus 385 ~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~ 428 (490)
T PRK10642 385 NISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVT 428 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHH
Confidence 4456667889999998877654 676665555444444444443
No 115
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.58 E-value=2.3e-12 Score=133.41 Aligned_cols=370 Identities=13% Similarity=0.083 Sum_probs=233.3
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhc---cCc-hHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSY---MGR-FWTIASFS 103 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~---~Gr-k~~~~~~~ 103 (568)
.|.-+.--...+..++.+..+..++..|+++..|+++..+|.+..+.=+.-++.-|+.|.++||. +|| |+.++.+.
T Consensus 11 ~~eki~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ 90 (467)
T COG2211 11 LKEKIGYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGA 90 (467)
T ss_pred HHHHHhhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHh
Confidence 34446666778888899999999999999999999999999999999999999999999999985 254 56777777
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhh
Q 008355 104 IIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFN 183 (568)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (568)
+.+++.+.++..+ |.. +........++.-.+.+++...+.....++.+++.+..++ |.+..+
T Consensus 91 ip~~i~~~l~F~~---p~~----------~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~E-----R~~l~s 152 (467)
T COG2211 91 IPFAIVAVLLFIT---PDF----------SMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQE-----RASLTS 152 (467)
T ss_pred HHHHHHHHHHHcC---CCc----------ccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHH-----HHHHHH
Confidence 8888888888776 210 1123344455566778899999988999999999875542 999999
Q ss_pred hHHHHHHHhHHHhhhhhhheec-------cccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHh
Q 008355 184 WFYLSINIGALVASSVLVWIQM-------NVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFR 256 (568)
Q Consensus 184 ~~~~~~~ig~~~~p~~~~~i~~-------~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (568)
+-....++|..+...+.+.+.. ..||+..-.+.+++..++++..+...+|...++...++
T Consensus 153 ~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~------------- 219 (467)
T COG2211 153 WRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKT------------- 219 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcc-------------
Confidence 9999999997776665554443 23566555555554444544444433322111100000
Q ss_pred hcccccCCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHh
Q 008355 257 KSNVVVPADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWAS 336 (568)
Q Consensus 257 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (568)
+.+.++.+.. ......|.+...+...++
T Consensus 220 -------------------------------~~~~~~~~~~---------------------~~~~~Nrp~~~~l~~~l~ 247 (467)
T COG2211 220 -------------------------------GVKLKLKDSF---------------------LLIFKNRPLLLLLLMNLL 247 (467)
T ss_pred -------------------------------cccccHHHHH---------------------HHHHccchHHHHHHHHHH
Confidence 0000000000 000111222222223333
Q ss_pred hhHHHhhhccccceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHH
Q 008355 337 GIVFATVYSQMSTMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGL 416 (568)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~ 416 (568)
.............++.....+.... .+...........++..++..+ +.+| +++++...++.
T Consensus 248 ~~~~~~i~~s~~~yy~~y~lg~~~l-------~~~~~~~~~~~~~l~~~~~~p~----L~~~-------~gkk~~~~~~~ 309 (467)
T COG2211 248 LFIAFNIRGSIMVYYVTYVLGDPEL-------FAYLLLLASGAGLLIGLILWPR----LVKK-------FGKKKLFLIGL 309 (467)
T ss_pred HHHHHHHHhhhhheeEEEEcCChHH-------HHHHHHHHHHHHHHHHHHhHHH----HHHH-------hchHHHHHHHH
Confidence 3333333344444444432211111 1111111111222222233222 4444 44456778888
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCC-------hhhHHHH
Q 008355 417 LISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAP-------DAMRSLC 489 (568)
Q Consensus 417 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P-------~~~rg~~ 489 (568)
++..++.+...+... .+.++.+...++.+++.+...+..|+.+.|... .|..|..
T Consensus 310 ~~~~i~~~~~~f~~~------------------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~ 371 (467)
T COG2211 310 LLLAVGYLLLYFTPA------------------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIV 371 (467)
T ss_pred HHHHHHHHHHHhhcC------------------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhH
Confidence 888888777665541 255666666788889999999999999988764 4567888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 008355 490 SALSLTTVAVGNYLSTLLVTIVTKVTT 516 (568)
Q Consensus 490 ~g~~~~~~~lg~~lg~~l~~~i~~~~~ 516 (568)
.|...+..-+|.+++..+.+++....+
T Consensus 372 ~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 372 YSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999887664
No 116
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.52 E-value=7.7e-14 Score=144.52 Aligned_cols=191 Identities=17% Similarity=0.127 Sum_probs=144.7
Q ss_pred CCccCCCcceehhHhhHHHHHHHHHHHHHHHHHHHHHH-HhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCc-hHH
Q 008355 21 NKKKTGNWKACRFILGNECCERLAYYGMSTNLVNYLQK-QLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGR-FWT 98 (568)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Gr-k~~ 98 (568)
....+.+||.+++..+..++....++.+.+..-+|+++ +.+.+....|++.++..++..++.+..|+++.|. |+ |+-
T Consensus 26 ~~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~-~~~k~P 104 (488)
T KOG2325|consen 26 LDERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKT-GSVKKP 104 (488)
T ss_pred ccccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhccccccc-CCcccC
Confidence 34446789999999999999999988888888889875 4777788899999999999999999999999998 75 777
Q ss_pred HHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhh
Q 008355 99 IASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKK 178 (568)
Q Consensus 99 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r 178 (568)
++++.++.++|.++....+-.|. ...+.++++|++.|+|.|.. ...-+++++....++ |
T Consensus 105 li~s~ii~~~g~llY~~l~~~~~--------------~~~y~mL~~R~l~Gvg~~n~-a~lR~Y~a~~s~~~d------R 163 (488)
T KOG2325|consen 105 LIVSFLIAIIGNLLYLALAYVPN--------------GVKYLMLVARILTGVGVGNF-AVLRAYIADASTVED------R 163 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHhccc--------------chHHHHHHHHHHcCcCcccH-HHHHHHHHhccCccc------h
Confidence 77888999999988854434443 46889999999999998764 466788888877777 8
Q ss_pred hhhhhhHHHHHHHhHHHhhhhhhhee----ccc---------cchhhhhHHHHHHHHHHHHHHhcCce
Q 008355 179 SSFFNWFYLSINIGALVASSVLVWIQ----MNV---------GWGWGFGIPAVAMAIAVVFFFSGSRL 233 (568)
Q Consensus 179 ~~~~~~~~~~~~ig~~~~p~~~~~i~----~~~---------g~~~~f~~~~~~~~~~~~~~~~~~~~ 233 (568)
.++++....+..+|..+||.+...+. +.+ -+..+-|+.++..++.++++....+|
T Consensus 164 ~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E 231 (488)
T KOG2325|consen 164 PRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKE 231 (488)
T ss_pred HHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheee
Confidence 99998877766777777776654332 111 13345566666666666555554444
No 117
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.51 E-value=3.6e-13 Score=141.02 Aligned_cols=177 Identities=12% Similarity=0.030 Sum_probs=134.3
Q ss_pred CcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHH
Q 008355 27 NWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIY 106 (568)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~ 106 (568)
+++..+..+...+.....++....++|.|+++++|++..+.+++.+...++..++.++.|+++||+ |||+.+..+.+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~-g~~~~~~~~~~~~ 292 (393)
T PRK15011 214 NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRL-GKRFLMRVAAVAG 292 (393)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHH
Confidence 344445555555555556666777899999999999999999988887788888999999999999 9999887766555
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY 186 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (568)
.+........ ++.+.+++.+++.+++.|...+..+.+..|.+|+ + |+++.++++
T Consensus 293 ~~~~~~~~~~-------------------~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~------~g~~~~~~~ 346 (393)
T PRK15011 293 VCFYAGMLMA-------------------HSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-Q------AGSATTLYT 346 (393)
T ss_pred HHHHHHHHHH-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-C------cchHHHHHH
Confidence 4443333333 2355566677777777666666666777888874 5 889999998
Q ss_pred HHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhc
Q 008355 187 LSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSG 230 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~ 230 (568)
...++|..++|.++|.+.+.+||+..|++.++..+++++..+..
T Consensus 347 ~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 347 NTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 88999999999999999998999999998877776666655543
No 118
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.48 E-value=5.4e-11 Score=120.01 Aligned_cols=376 Identities=12% Similarity=0.118 Sum_probs=215.7
Q ss_pred HHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccC-----c-hHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 008355 56 LQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMG-----R-FWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKD 129 (568)
Q Consensus 56 l~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~G-----r-k~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 129 (568)
+..+++++....+..++...+.+ ..++..|+.||+. + | .+-++.|.+.++.+..+.+.+...-. ....+
T Consensus 6 MIvEL~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~-~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~---~~~~~ 80 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVA-PLRVWFGHRSDTH-PSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLA---ESGQQ 80 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHH-HHHHHhccccccC-cccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHc---ccccc
Confidence 45679999988888888777666 4699999999998 5 4 44566677777777776665422111 00000
Q ss_pred CCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccccc
Q 008355 130 ACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVGW 209 (568)
Q Consensus 130 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g~ 209 (568)
.-.+.........+...+.|+|.+...++..++++|..|+++ |+++.++.+...-+|.+++.++.+.+.+.++.
T Consensus 81 ~~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~------R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~ 154 (403)
T PF03209_consen 81 SSGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEER------RPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP 154 (403)
T ss_pred cccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhh------hhhhHHHHHHHHHHHHHHHHHHHHHHccccCH
Confidence 000111222234444556788888888899999999999998 99999999999999999999999988887763
Q ss_pred hhhh-hHHH---HHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhhhhhhhhhhccCccc
Q 008355 210 GWGF-GIPA---VAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYETADEECNIQGSRKL 285 (568)
Q Consensus 210 ~~~f-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l 285 (568)
.-.. .+.. +..++.++..+-..++.++..+..+
T Consensus 155 ~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~~~~~~~------------------------------------------- 191 (403)
T PF03209_consen 155 ERLIQVIQGVALIALLLNLIALWGQEPRRSRRAAAAE------------------------------------------- 191 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCcccccCCC-------------------------------------------
Confidence 2222 1111 2222222222222221111110000
Q ss_pred cCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhccccceeEeecccccCCCCCC
Q 008355 286 ESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMSTMFVLQGNTMDQHMGPN 365 (568)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (568)
.++.++.+. |++...+ .+.++++. .+++....+++....+.+ .-++-
T Consensus 192 --~~~~~f~~a----------------~~~~~~~--~~a~~f~~--fl~l~t~a~~~QD~iLEP-----------ygg~V 238 (403)
T PF03209_consen 192 --RPRPPFREA----------------WRQVWAS--PQARRFFV--FLFLGTLAFFMQDVILEP-----------YGGEV 238 (403)
T ss_pred --CCCccHHHH----------------HHHHHhC--CChhHHHH--HHHHHHHHHHhhHHHcCC-----------chhHH
Confidence 000000000 0000000 01122211 112222222222222111 11112
Q ss_pred cccCchh---hccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCc
Q 008355 366 FKIPSAS---LSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNY 442 (568)
Q Consensus 366 ~~~~~~~---~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~ 442 (568)
++++++. ++.....+.++...+.++. ..+| .++.+...+|..++.+++.........
T Consensus 239 fgmsv~eTT~Lta~~~~G~L~G~~~~g~~---l~~~-------~~~~~~a~~G~~~~~~~f~lii~a~~~---------- 298 (403)
T PF03209_consen 239 FGMSVGETTRLTAFWGGGTLLGMLLAGFL---LSRR-------LGKKRTAALGCLLGALAFALIILAGPL---------- 298 (403)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHH---hcCC-------CCchHHHHHHHHHHHHHHHHHHHHHhc----------
Confidence 2233332 3333344444444444332 1122 444556667888887777665544321
Q ss_pred CCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCcc
Q 008355 443 YDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLG 522 (568)
Q Consensus 443 ~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~ 522 (568)
.+.+.+-+..+++|++.++......+...++++++..|..+|.|...+.++..+|..+++.+.|....
T Consensus 299 -------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~----- 366 (403)
T PF03209_consen 299 -------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRA----- 366 (403)
T ss_pred -------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 25667788889999999999999999999999999999999999999999999999999988776531
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHHHHHH
Q 008355 523 WIPDNLNRGHLDYFYWLLTILSVLNFLVY 551 (568)
Q Consensus 523 ~~~~~~~~~~~~~~f~~~a~~~~v~~v~~ 551 (568)
+.. .-....|..+|.+=++..+++.++.
T Consensus 367 ~~~-~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 367 LFG-NSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred hcc-CCcchHHHHHHHHHHHHHHHHHHHH
Confidence 111 0012244555555555555554433
No 119
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.45 E-value=6.7e-13 Score=142.29 Aligned_cols=176 Identities=12% Similarity=0.046 Sum_probs=134.0
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
+.+|.+.+..++....++++..|+|.|+++++|+|..+.++..+.+.++..++.+++|+++||+ |||+.+........+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-g~r~~~~~~~~~~~~ 336 (467)
T PRK09556 258 PVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLA-NGRRALVACIALALI 336 (467)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCchHHHHHHHHHH
Confidence 4577888888888888888999999999999999999999999999999999999999999999 999877665444443
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
+..+..... . .+....++.+++.|+...+..........|.+|+++ |+++.|+.+..
T Consensus 337 ~~~~~~~~~--~---------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~------~g~a~gi~~~~ 393 (467)
T PRK09556 337 IFTLGVYQH--A---------------TSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKA------IGVANGIKGTF 393 (467)
T ss_pred HHHHHHHHh--c---------------CcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhh------HHHHHHHHHHH
Confidence 332222220 0 234455566677775443333233356679999988 99999999988
Q ss_pred HHH-hHHHhhhhhhheec------------cccchhhhhHHHHHHHHHHHHHH
Q 008355 189 INI-GALVASSVLVWIQM------------NVGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 189 ~~i-g~~~~p~~~~~i~~------------~~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
.++ |+.++|.+.|++.+ ..||+..|++..+..+++.+..+
T Consensus 394 g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~ 446 (467)
T PRK09556 394 AYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMA 446 (467)
T ss_pred HHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHH
Confidence 886 77999999999998 57899999887766666655444
No 120
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.45 E-value=1.2e-13 Score=130.16 Aligned_cols=400 Identities=10% Similarity=0.105 Sum_probs=226.0
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGM 110 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 110 (568)
+...++..+...++|- --.-+..+.+++.++..++..++.+.++.=..+.+.++|++.||.+|-|..-++-..+..+|-
T Consensus 46 lv~mc~lgfgsyfcyd-~p~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~Gq 124 (459)
T KOG4686|consen 46 LVFMCLLGFGSYFCYD-APGALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQ 124 (459)
T ss_pred HHHHHHhcccceeecC-CchhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHH
Confidence 3344444444444432 223356677777788778888999999999999999999999999898877666666677777
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHH
Q 008355 111 TLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSIN 190 (568)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 190 (568)
++++..- ..+.+|.+..+|++.|+|.-....+...+...+|..+| .+.++|+......
T Consensus 125 liFa~Gg----------------i~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKE------Ln~vfGlqlSvAR 182 (459)
T KOG4686|consen 125 LIFAAGG----------------ISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKE------LNFVFGLQLSVAR 182 (459)
T ss_pred HHHHhch----------------HHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCcc------ccchhhHHHHHHH
Confidence 7766431 11568999999999999988888888999999999999 9999999988889
Q ss_pred HhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhh
Q 008355 191 IGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLY 270 (568)
Q Consensus 191 ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 270 (568)
+|...--.+.+++.+..+--.+ ...-..+++.+.+-.+... .++ ..+... ..
T Consensus 183 ~GstvNf~lm~~ly~~~~~~~~---~~ghT~LG~~l~~~~~tc~-------~sl-------ical~l---g~-------- 234 (459)
T KOG4686|consen 183 LGSTVNFLLMPFLYDTMGRMFP---GVGHTLLGLWLCFEVKTCK-------QSL-------ICALSL---GL-------- 234 (459)
T ss_pred hhceeeeeecHHHHHHHHHhcc---cchHHHHHHHHHHHHHHHH-------HHH-------HHHHHh---hh--------
Confidence 9988877777777765542111 1111112222111100000 000 000000 00
Q ss_pred hhhhhhhhhccCcccc--CCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHHHhhhcccc
Q 008355 271 ETADEECNIQGSRKLE--STSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVFATVYSQMS 348 (568)
Q Consensus 271 ~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (568)
..++ +++..++-+ .++..+..|.. +..| .+.....++.+.-..|..+....
T Consensus 235 ~D~r---Aerilh~e~g~~Ge~pkLtdv~-----------~f~p-------------pfw~~~iicv~yyva~fPFi~lg 287 (459)
T KOG4686|consen 235 SDDR---AERILHLEEGFLGEEPKLTDVN-----------TFYP-------------PFWVLVIICVLYYVAWFPFITLG 287 (459)
T ss_pred hhhH---HHHHHhhhcCcccCCccccccc-----------ccCc-------------cHHHHHHHHHHHHHHHHHHhhhh
Confidence 0000 000000000 00000000000 0001 01111112222222223333333
Q ss_pred ceeEeecccccCCCCCCcccCchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHH
Q 008355 349 TMFVLQGNTMDQHMGPNFKIPSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGI 428 (568)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~ 428 (568)
..+.+ ...| -.....+.+.+.......+..|+.+.+.++.+++ .+++.-+.++..++-....+
T Consensus 288 ~~fF~------~rfG-lS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n----------~~wv~~a~~~tl~~H~~l~F 350 (459)
T KOG4686|consen 288 PMFFQ------KRFG-LSAVSAGNILSTVYGISAVLSPVFGAISDKYGFN----------LWWVASACILTLLGHSGLFF 350 (459)
T ss_pred HHHHH------HhhC-CChhhccchhhhhhhhhhhhhhhHHHhHhhhcce----------ehhHHHHHHHHHHHhhhHHh
Confidence 32222 1112 0011122222333344455667766654444433 12333343333333222221
Q ss_pred HHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHH
Q 008355 429 LEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLV 508 (568)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~ 508 (568)
+.+--.....+.|+...+.....|..+..+.|++.-|++.|..+...++|-.+.|++.
T Consensus 351 ----------------------t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iia 408 (459)
T KOG4686|consen 351 ----------------------TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIA 408 (459)
T ss_pred ----------------------hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhh
Confidence 2222234567788888888888999999999999999999999999999999999999
Q ss_pred HHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhce
Q 008355 509 TIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFT 559 (568)
Q Consensus 509 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~ 559 (568)
+++.+..+. + .+.+.+|.....+++.+..+.+.+-++..
T Consensus 409 g~i~d~~g~-----y-------~~le~ffl~~~~~aL~svgil~~~N~kq~ 447 (459)
T KOG4686|consen 409 GFIADGDGS-----Y-------DNLEAFFLIIGLMALTSVGILFYLNKKQS 447 (459)
T ss_pred heeecCCCc-----h-------hhHHHHHHHHHHHHHHHHHHHhheecccc
Confidence 988764321 1 13445666667777777766666555443
No 121
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.45 E-value=6.5e-13 Score=137.34 Aligned_cols=170 Identities=12% Similarity=0.093 Sum_probs=136.3
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
+..+.+....++..+.......+.+.|. +++|.+..+.+.+.+.+.+...++.++.|+++||+ |||+.+.++.+...+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~ 282 (377)
T TIGR00890 205 PQFWVLYLSFFLNAVSGLLLIGLYKPYG-QSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKI-GRQKTMSIVFGISAV 282 (377)
T ss_pred ccHHHHHHHHHHHhHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhhhHHHHHHHH
Confidence 3445555555555555555566677775 56899988899999999999999999999999999 999999998888888
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
+.++.....+ .+...+++..++.+++.+...+..+.++.|.+|+++ |++++++++..
T Consensus 283 ~~~~~~~~~~-----------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~ 339 (377)
T TIGR00890 283 GMAAMLFIPM-----------------LNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPAN------SAANYGFLYTA 339 (377)
T ss_pred HHHHHHHccc-----------------chhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhh------hhhHhHHHHHH
Confidence 7776665511 123334455677888888888888899999999988 99999999999
Q ss_pred HHHhHHHhhhhhhheeccccchhhhhHHHHHHHHH
Q 008355 189 INIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIA 223 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~ 223 (568)
.++|..++|.+.+.+.+..||++.|.+.++..+++
T Consensus 340 ~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 340 KAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred HHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 99999999999999999999999998877665544
No 122
>PRK09952 shikimate transporter; Provisional
Probab=99.44 E-value=1.3e-12 Score=138.83 Aligned_cols=182 Identities=15% Similarity=0.079 Sum_probs=131.4
Q ss_pred CcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHH
Q 008355 27 NWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIY 106 (568)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~ 106 (568)
+++.....+...++..+.+|....+++.|+++.+|++......+.........++.++.|+++||+ |||+++..+.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~-grr~~~~~~~~~~ 326 (438)
T PRK09952 248 HPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRF-GRRRVYITGALIG 326 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchHHHHHHHHHH
Confidence 344434444456677788899999999999999999887666555566677788889999999999 9999988876655
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhh-H
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNW-F 185 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~ 185 (568)
.++...+..... .. .+...+++..++.+++.+...+..+++++|.+|.+. |+++.++ +
T Consensus 327 ~~~~~~~~~~~~-~~--------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~------r~tg~g~~~ 385 (438)
T PRK09952 327 TLSAFPFFMALE-AQ--------------SIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASY------RYSGAGVGY 385 (438)
T ss_pred HHHHHHHHHHHH-cC--------------ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcch------hHHHHhHHH
Confidence 544433322210 00 123344455566678888778888999999999987 9999988 5
Q ss_pred HHHHHHhHHHhhhhhhheeccc--cchhhhhHHHHHHHHHHHHHHhc
Q 008355 186 YLSINIGALVASSVLVWIQMNV--GWGWGFGIPAVAMAIAVVFFFSG 230 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~~~--g~~~~f~~~~~~~~~~~~~~~~~ 230 (568)
..+..+|+.++|.+.+++.+.. +|...+...++..+++.+..+..
T Consensus 386 ~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 386 QVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 5556689999999999987744 47777777666666665555443
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.43 E-value=1e-12 Score=138.58 Aligned_cols=180 Identities=12% Similarity=0.017 Sum_probs=138.8
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCh--------hhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGN--------VTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIAS 101 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~--------~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~ 101 (568)
.++.+++..++..........+++.|+++ .|.+. .+.+...+...+...++.++.|+++||+ |||+++.+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~-g~r~~l~~ 286 (418)
T TIGR00889 209 RMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRF-GIKKVMLL 286 (418)
T ss_pred CeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHH
Confidence 34555566666666555566777888764 55443 5668888889999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhh
Q 008355 102 FSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSF 181 (568)
Q Consensus 102 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 181 (568)
+.++..++..++..... +..+.+.+++.+++.|++.+...+....++.|.+|+++ |+++
T Consensus 287 ~~~~~~v~~~l~~~~~~---------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~------~g~~ 345 (418)
T TIGR00889 287 SLVAWALRFGFFAYGDP---------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHI------RASA 345 (418)
T ss_pred HHHHHHHHHHHHHHcCc---------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH------HHHH
Confidence 99888887766665311 00134567778899999999888888999999999988 9999
Q ss_pred hhhHH-HHHHHhHHHhhhhhhheecc------ccchhhhhHHHHHHHHHHHHHHhcCc
Q 008355 182 FNWFY-LSINIGALVASSVLVWIQMN------VGWGWGFGIPAVAMAIAVVFFFSGSR 232 (568)
Q Consensus 182 ~~~~~-~~~~ig~~~~p~~~~~i~~~------~g~~~~f~~~~~~~~~~~~~~~~~~~ 232 (568)
+++.+ ...++|..+||.++|++.+. +||+..|.+.++..+++.+++....+
T Consensus 346 ~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 346 QGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99987 67789999999999999887 46999998877666655555444444
No 124
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.43 E-value=1.6e-12 Score=136.39 Aligned_cols=169 Identities=12% Similarity=0.110 Sum_probs=135.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhh
Q 008355 38 ECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTA 117 (568)
Q Consensus 38 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~ 117 (568)
..+..+++.....+++.|+.+ .|.+ +.++..+.+.++..++.++.|++.||+ |||+.+..+.++..++..+....
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~~~~~~~~~~~~~~~~- 299 (399)
T PRK05122 225 LALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRL-GGLRVAIVSLLVEILGLLLLWLA- 299 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHh-
Confidence 344556666777888888764 5653 456667778888889999999999999 99999988888777777666655
Q ss_pred hccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhh
Q 008355 118 SVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVAS 197 (568)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p 197 (568)
.+.+.+++.+++.|++.+...+.....+.|.+|+++ |+++.++++...++|..++|
T Consensus 300 ------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~~~~ 355 (399)
T PRK05122 300 ------------------PSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQN------RGAALGAYSVFLDLSLGITG 355 (399)
T ss_pred ------------------ccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 345667778889999999888887788888888887 99999999999999999999
Q ss_pred hhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceee
Q 008355 198 SVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYR 235 (568)
Q Consensus 198 ~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 235 (568)
.+.|++.+..||++.|++.++..+++++.....+++.+
T Consensus 356 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (399)
T PRK05122 356 PLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRRAP 393 (399)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999888777777666555544433
No 125
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.43 E-value=2.4e-12 Score=133.50 Aligned_cols=171 Identities=12% Similarity=0.015 Sum_probs=133.8
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGM 110 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 110 (568)
.+.+....++..........++|.|+++++|.+..+.++..+...+...++.+++|+++||+ |||+.+.++.+...+..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 279 (375)
T TIGR00899 201 TRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF-GKRRLMLLAALAGVAFY 279 (375)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-cchhHHHHHHHHHHHHH
Confidence 34444444454454555667789999999999999999888877777888899999999999 99999888776655554
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHH
Q 008355 111 TLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSIN 190 (568)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 190 (568)
...... ++.+.+++.+++.|++.|...+....+..|..|+ + +++++++++...+
T Consensus 280 ~~~~~~-------------------~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~ 333 (375)
T TIGR00899 280 TGLAAD-------------------NSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPG-R------AGAATTLYTNTGR 333 (375)
T ss_pred HHHHHH-------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-h------hhHHHHHHHHHHH
Confidence 444433 3456667778888888888888888888888775 4 6699999999999
Q ss_pred HhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHH
Q 008355 191 IGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 191 ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
+|..++|.+.|.+.+..||+..|++.++..+++.+...
T Consensus 334 ~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 334 VGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999988877766665544
No 126
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.42 E-value=1.1e-12 Score=131.46 Aligned_cols=179 Identities=18% Similarity=0.225 Sum_probs=146.0
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhcc-CchHHHHH-HHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYM-GRFWTIAS-FSII 105 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~-Grk~~~~~-~~~~ 105 (568)
.|.+|.+++..++..+.-|++.-|.|.|+.|..|+|...+++..+.|-.++..++++.||+|||++ |||...-+ .++.
T Consensus 251 Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~ 330 (448)
T COG2271 251 NKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLL 330 (448)
T ss_pred ChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHH
Confidence 578999999999999999999999999999999999999999999999999999999999999998 66654433 3333
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
..++.+..-.+ |. .|.....+..+..|+-.-+.+-.+.....|..|++. -|++.|..
T Consensus 331 i~~~~~~~w~~---~~--------------~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~A------aGtA~Gf~ 387 (448)
T COG2271 331 ITASLVLYWLA---PN--------------GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKA------AGTATGFV 387 (448)
T ss_pred HHHHHHHHHcC---CC--------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhh------ccchhchh
Confidence 33444444443 22 456777777788888877777677777889999887 89999999
Q ss_pred HHHHHH-hHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHh
Q 008355 186 YLSINI-GALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 186 ~~~~~i-g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~ 229 (568)
.....+ |..++....+++.|.+||...|.+..+..+++.+++..
T Consensus 388 Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 388 GLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred hhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHH
Confidence 998888 99999999999999999999998876666666554433
No 127
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.42 E-value=9.1e-13 Score=137.13 Aligned_cols=167 Identities=20% Similarity=0.121 Sum_probs=132.8
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLG 109 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 109 (568)
.++......++....++....++|.|+++++|.+..+.+.......+...++.++.|+++||+ |||+.+..+..+..+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~ 298 (394)
T TIGR00883 220 PFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRI-GRRPVLIIFTVLAALL 298 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh-chHHHHHHHHHHHHHH
Confidence 466677777788888888889999999989999999999999999999999999999999999 9999887655544433
Q ss_pred H-HHH-HHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhh-HH
Q 008355 110 M-TLL-TLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNW-FY 186 (568)
Q Consensus 110 ~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~ 186 (568)
. ... ... .. .+.+.+++..++.+++.+...+...+++.|.+|+++ |++++++ ++
T Consensus 299 ~~~~~~~~~---~~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~ 355 (394)
T TIGR00883 299 AVPLLMALL---DS--------------GSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEV------RYTGASLAYN 355 (394)
T ss_pred HHHHHHHHh---cC--------------CchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccc------eeeEeeehhH
Confidence 3 222 121 00 235556677778888888888999999999999988 9999998 56
Q ss_pred HHHHHhHHHhhhhhhheecccc-chhhhhHHHHHH
Q 008355 187 LSINIGALVASSVLVWIQMNVG-WGWGFGIPAVAM 220 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g-~~~~f~~~~~~~ 220 (568)
++..+|..++|.++|++.+..| |+..++..++..
T Consensus 356 ~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 356 LAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred hHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 6677899999999999999888 887766555433
No 128
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.40 E-value=2.7e-12 Score=134.93 Aligned_cols=171 Identities=9% Similarity=-0.060 Sum_probs=132.3
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHH
Q 008355 32 RFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMT 111 (568)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~ 111 (568)
+.+....++....++....++|.|+++ .|++..+.+...+.+.++..++.++.|+++||+ |||+.+..+.+...++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~ 300 (406)
T PRK11551 223 LLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRL-RPRRVVLLIYAGILASLA 300 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHH
Confidence 334444555556677778888988875 799999999999999999999999999999999 999998876666555555
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHH
Q 008355 112 LLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINI 191 (568)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 191 (568)
..... .+.+.+++..++.|++.++..+...+++.|.+|+++ |+++.++.+....+
T Consensus 301 ~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~ 355 (406)
T PRK11551 301 ALAAA-------------------PSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQV------RGTGVGAAVAVGRL 355 (406)
T ss_pred HHHhc-------------------CcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhh------hhhhhhHHHHhhhH
Confidence 44443 234555666677788777778888899999999988 99999999999999
Q ss_pred hHHHhhhhhhheecccc-chhhhhHHHHHHHHHHHHHHh
Q 008355 192 GALVASSVLVWIQMNVG-WGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 192 g~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~~~~~~~~~ 229 (568)
|..++|.+.|++.+..+ |...+++.....+++.++.+.
T Consensus 356 g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 356 GSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987654 556666655555555444443
No 129
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.39 E-value=6e-12 Score=128.62 Aligned_cols=172 Identities=22% Similarity=0.261 Sum_probs=151.2
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchH-HHHHHHHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFW-TIASFSIIYCL 108 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~-~~~~~~~~~~i 108 (568)
.++...+..++..........+++.|+.+.+|.+..+.+.......++..++.++.|+++||+ |||+ .+..+.++..+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~i 254 (352)
T cd06174 176 LLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL-GRRRLLLLIGLLLAAL 254 (352)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHH
Confidence 345555666777777778888899999887799999999999999999999999999999999 9999 99999888888
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
+....... .+.+.+++..++.|++.+...+....++.|.+|+++ |++.+++.+..
T Consensus 255 ~~~~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 309 (352)
T cd06174 255 GLLLLALA-------------------PSLALLLVALLLLGFGLGFAFPALLTLASELAPPEA------RGTASGLFNTF 309 (352)
T ss_pred HHHHHHHh-------------------ccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHH------HHHHHHHHHHH
Confidence 88887766 346778888999999999999999999999999887 99999999999
Q ss_pred HHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHH
Q 008355 189 INIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFF 227 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~ 227 (568)
.++|..++|.+.+.+.+..+|+..|++.++..+++.+..
T Consensus 310 ~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 310 GSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999998887776666554
No 130
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.38 E-value=5.6e-11 Score=120.14 Aligned_cols=182 Identities=10% Similarity=-0.001 Sum_probs=121.7
Q ss_pred ehhHhhHHHHHHHHH---HHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAY---YGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~---~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
-|++++...+-++++ +.-......|..+.+| +...+-|...+|.+.+....+++-|+.||+ |-|....++....+
T Consensus 43 RW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~-GLR~a~llgt~ln~ 120 (480)
T KOG2563|consen 43 RWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKF-GLRTALLLGTVLNG 120 (480)
T ss_pred HhHHHHHHHHHHhcCcchheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhccc-chHHHHHHHHHHHH
Confidence 355555555555544 1112334567777777 666778889999999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhH--HHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTA--VTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
+|..+=.++ +.|.+. +.++ ..+.+..+.+.++-.+....+-+.+-+|++++ |..+..+-
T Consensus 121 iGa~Ir~is-s~p~v~------------~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~q------ra~A~~~~ 181 (480)
T KOG2563|consen 121 IGAWIRLIS-SLPFVP------------PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQ------RAIATVLG 181 (480)
T ss_pred HHHHHhhhc-cCcccc------------ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcch------hhhhhhHH
Confidence 998876655 223211 2233 67788888888888888777788889999999 88888775
Q ss_pred HHHHHHhHHHhhhhhhheec------cccchhh--hhHHHHHHHHHHHHHHhcCce
Q 008355 186 YLSINIGALVASSVLVWIQM------NVGWGWG--FGIPAVAMAIAVVFFFSGSRL 233 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~------~~g~~~~--f~~~~~~~~~~~~~~~~~~~~ 233 (568)
.+++.+|..+|-++...+.. ...|... |+...+...+.+.+....+++
T Consensus 182 v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~ 237 (480)
T KOG2563|consen 182 VMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTK 237 (480)
T ss_pred HhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 55555555555444444433 2345542 443344444444444444443
No 131
>PRK03699 putative transporter; Provisional
Probab=99.38 E-value=4.9e-12 Score=132.50 Aligned_cols=170 Identities=16% Similarity=0.121 Sum_probs=134.4
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
+.++.+.+..++....++++..++|.|+++.+|+|..+.+.+.+.+.++..++.++.|+++||+ |||+.+.....+.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~l~~~~~~~~~ 283 (394)
T PRK03699 205 IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFF-DLQRILTVLAGLALV 283 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHh-chhhHHHHHHHHHHH
Confidence 3456666666777777888899999999999999999999999999999999999999999999 999998877766665
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
...+.... .+...+.+..++.|++.+...+...+...+..|. + +++..+.....
T Consensus 284 ~~~~~~~~-------------------~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~-~------~~~~~g~~~~~ 337 (394)
T PRK03699 284 LMYLFVNT-------------------DDPSHLLYAILGLGFFSSAIYTTIITLGSQQTKV-A------SPKLVNFILTC 337 (394)
T ss_pred HHHHHHHc-------------------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-C------CHHHHHHHHHh
Confidence 55444433 2344455566777888777777777777776653 3 55667888888
Q ss_pred HHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHH
Q 008355 189 INIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVV 225 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~ 225 (568)
.++|..++|.+.|++.+..|++..|+..++..+++.+
T Consensus 338 ~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 338 GTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred hhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHH
Confidence 8999999999999999999999999887766655544
No 132
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.37 E-value=7.8e-12 Score=130.43 Aligned_cols=170 Identities=11% Similarity=-0.054 Sum_probs=145.8
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
|.++..++..++...+++....+.++|+++ +|.+..++|...+...++..++.++.|++.||+ |+|+.+.++.+...+
T Consensus 205 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~-g~~~~l~~~~~~~~~ 282 (382)
T TIGR00902 205 PMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNC-SARDLLLISAIACVG 282 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhC-CHHHHHHHHHHHHHH
Confidence 456777777788888888888999999965 999999999999999999999999999999999 999999999999998
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH-H
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY-L 187 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~ 187 (568)
.....+.+ ++.+.+++..++.|+..|...++...++.+. |+++ |+++.++++ .
T Consensus 283 ~~~~~~~~-------------------~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~------~~~~q~~~~~~ 336 (382)
T TIGR00902 283 RWAIIGAI-------------------EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSE------IAKLQALYNAL 336 (382)
T ss_pred HHHHHHhH-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhh------HHHHHHHHHHH
Confidence 88887766 5678888899999999999999999999987 8777 899999976 5
Q ss_pred HHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHH
Q 008355 188 SINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFF 227 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~ 227 (568)
...+|..++|.++|++.+.+|+ ..|++.+...++++++.
T Consensus 337 ~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 337 AMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHHH
Confidence 6789999999999999999986 56776666665555443
No 133
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.37 E-value=2.1e-12 Score=136.47 Aligned_cols=173 Identities=11% Similarity=0.044 Sum_probs=134.6
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHHh---CCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQL---NQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIY 106 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---g~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~ 106 (568)
.++.+++..++....+.....+++.|+.+.+ +.+..+.|.+.++..+...++.+++|+++||+ |||+.+..+.++.
T Consensus 224 ~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-g~~~~~~~~~~l~ 302 (420)
T PRK09528 224 KFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRI-GAKNALLLAGTIM 302 (420)
T ss_pred CeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcchhhHHHHHHH
Confidence 3444444444444444445556777776543 56667789999999999999999999999999 9999999988888
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhh-H
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNW-F 185 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~ 185 (568)
.++..+.+++ .+.+.+++.+++.+++.+...+....++.|.+|++. |++..+. +
T Consensus 303 ~~~~~l~~~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~a~~~~~~~ 357 (420)
T PRK09528 303 AVRIIGSGFA-------------------TGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRL------SATIYLVGF 357 (420)
T ss_pred HHHHHHHHhc-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccc------eeeeeeehH
Confidence 8887777765 456778888899998888777777788899999887 8887766 6
Q ss_pred HHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHH
Q 008355 186 YLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
+...++|..++|.+.|++.+.+||+..|.+.++..++..++.+
T Consensus 358 ~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 400 (420)
T PRK09528 358 QFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISV 400 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHH
Confidence 7888999999999999999999999999987765554444333
No 134
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.37 E-value=5.2e-12 Score=132.67 Aligned_cols=169 Identities=12% Similarity=0.087 Sum_probs=131.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCChh---hhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHH
Q 008355 35 LGNECCERLAYYGMSTNLVNYLQKQLNQGNV---TASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMT 111 (568)
Q Consensus 35 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~---~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~ 111 (568)
+...++.......+.++++.|+.+..+.... ..+.+.++..++..++.+..|+++||+ |||+.+..+.+...++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~ 303 (408)
T PRK09874 225 FVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRI-GPEKILITALIFSVLLLI 303 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccchhHHHHHHHHHHHHH
Confidence 3334444555555667788888765443221 245556666778888899999999999 999999988887776666
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHH
Q 008355 112 LLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINI 191 (568)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 191 (568)
..... .+.+.+++.+++.|++.+...|...+++.+..|+++ |++.+++++...++
T Consensus 304 ~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~ 358 (408)
T PRK09874 304 PMSFV-------------------QTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQI------AGRIFSYNQSFRDI 358 (408)
T ss_pred HHHHh-------------------ccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCccc------ceeeehHHHHHHHH
Confidence 65554 345667788889999999999998888888888887 99999999999999
Q ss_pred hHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHh
Q 008355 192 GALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 192 g~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~ 229 (568)
|..+||.++|++.+.+||++.|++.+++.+++.+..+.
T Consensus 359 g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~ 396 (408)
T PRK09874 359 GNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWN 396 (408)
T ss_pred HHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988777776655544
No 135
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.36 E-value=1.8e-11 Score=128.22 Aligned_cols=176 Identities=11% Similarity=-0.007 Sum_probs=137.1
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLG 109 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 109 (568)
..+.+.+..++....++++..++|.|+++ +|.+..+.|...+.+.++..++.++.|+++||+ |||+.+.++..+..++
T Consensus 206 ~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~-~~~~~~~~~~~l~~~~ 283 (393)
T PRK09705 206 RAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQ-DRRKLLMLALVLQLVG 283 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhc-cchHHHHHHHHHHHHH
Confidence 35666666777788888999999999986 899999999999999999999999999999999 9999998887777776
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCC-CCchhhhhhhhhhhhHHHH
Q 008355 110 MTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDE-TDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~~ 188 (568)
..+.... + .+..... .++.|++.+...|.......+.+++ ++ |++.+++.+..
T Consensus 284 ~~~~~~~---~---------------~~~~~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~ 337 (393)
T PRK09705 284 FCGFIWL---P---------------LQLPVLW--AMVCGLGLGGAFPLCLLLALDHSVQPAI------AGKLVAFMQGI 337 (393)
T ss_pred HHHHHHc---c---------------chHHHHH--HHHHHHhccchHHHHHHHHHhhcCCHHH------HHHHHHHHHHH
Confidence 6554432 1 1112222 2456788888888777777777754 44 89999999999
Q ss_pred HHHhHHHhhhhhhheecccc-chhhhhHHHHHHHHHHHHHHhcCce
Q 008355 189 INIGALVASSVLVWIQMNVG-WGWGFGIPAVAMAIAVVFFFSGSRL 233 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~~ 233 (568)
.+++..++|.+.|++.+..| |+..|.+.++..++.++......++
T Consensus 338 ~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (393)
T PRK09705 338 GFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPA 383 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccc
Confidence 99999999999999999876 7888887776666665555555544
No 136
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.36 E-value=6.3e-12 Score=139.52 Aligned_cols=135 Identities=10% Similarity=0.078 Sum_probs=109.6
Q ss_pred hhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHH
Q 008355 69 NNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLI 148 (568)
Q Consensus 69 ~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 148 (568)
....+..++..++.+++|+++||+ |||+++.++.++.+++.+++++. .+...+++.+++.
T Consensus 599 ~~~~l~~l~~i~G~il~g~L~Dr~-GRr~~l~~~~~lsai~~ll~~~~-------------------~s~~~ll~~~~l~ 658 (742)
T TIGR01299 599 FVNFLGTLAVLPGNIVSALLMDKI-GRLRMLAGSMVLSCISCFFLSFG-------------------NSESAMIALLCLF 658 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHH-------------------ccHHHHHHHHHHH
Confidence 334556688889999999999999 99999999999988888887776 2345566777788
Q ss_pred HhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHH
Q 008355 149 ALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 149 g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
+++.++.++...++++|++|++. |++++|+.+....+|+++||.+++.+.+. +...+|++.++..+++.++..
T Consensus 659 g~~~~~~~~~~~a~~aEl~Pt~~------Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~ 731 (742)
T TIGR01299 659 GGLSIAAWNALDVLTVELYPSDK------RATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLAL 731 (742)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHH
Confidence 88888888899999999999998 99999999999999999999999987664 456677777766666555544
Q ss_pred hc
Q 008355 229 SG 230 (568)
Q Consensus 229 ~~ 230 (568)
+.
T Consensus 732 ~L 733 (742)
T TIGR01299 732 KL 733 (742)
T ss_pred hC
Confidence 43
No 137
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.35 E-value=2.8e-12 Score=112.57 Aligned_cols=134 Identities=16% Similarity=0.245 Sum_probs=115.4
Q ss_pred hHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHH
Q 008355 70 NVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIA 149 (568)
Q Consensus 70 ~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 149 (568)
..+.+.++..++.++.|+++||+ |||+.+..+.....++.+..... .+.+.+.+.+++.|
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~-g~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~g 62 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRF-GRKPVLLVGLFIFVLSTAMFALS-------------------SNITVLIIARFLQG 62 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhc-chhHHHHHHHHHHHHHHHHHHHh-------------------ccHHHHHHHHHHHH
Confidence 44566788889999999999999 99999999988888887777665 35777888899999
Q ss_pred hhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHh
Q 008355 150 LGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 150 ~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~ 229 (568)
++.+...+...+++.|.+|+++ |++..++.+...++|..++|.+.+.+.+..+|++.|++.+...++..+....
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 63 FGAAFALVAGAALIADIYPPEE------RGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred HHHHHHHHhHHHHHHHHCChhh------hhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999988 9999999999999999999999999998889999998877666655554443
No 138
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.34 E-value=1.7e-11 Score=127.36 Aligned_cols=176 Identities=13% Similarity=0.017 Sum_probs=130.8
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHH-HHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTI-ASFSIIYC 107 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~-~~~~~~~~ 107 (568)
|.++..++..++..........+++.|+++.+|.+..+.+++.+...++..++.++.|+++||+ |||+.. ........
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 293 (399)
T TIGR00893 215 RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLL-LRRGKSLVFARKTAI 293 (399)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHH-hhcccchhHHHHHHH
Confidence 4567777888888888888999999999999999999999999999999999999999999999 888611 11111111
Q ss_pred HH---HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhh
Q 008355 108 LG---MTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNW 184 (568)
Q Consensus 108 i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (568)
++ ..+..... .. ..+.........+.+.+.+ ..+...+++.|.+|+++ |++++++
T Consensus 294 ~~~~~~~~~~~~~--~~-------------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~g~~~~~ 351 (399)
T TIGR00893 294 IAGLVLSLLMFAT--NY-------------VNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNI------AGLTGGL 351 (399)
T ss_pred HHHHHHHHHHHHh--cc-------------chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhH------HHHHHHH
Confidence 11 11111110 00 0123333333333444444 78889999999999988 9999999
Q ss_pred HHHHHHHhHHHhhhhhhheecccc-chhhhhHHHHHHHHHHHHH
Q 008355 185 FYLSINIGALVASSVLVWIQMNVG-WGWGFGIPAVAMAIAVVFF 227 (568)
Q Consensus 185 ~~~~~~ig~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~~~~~~~ 227 (568)
.+...++|..++|.+.+++.+..| |+..|++.++..+++.+..
T Consensus 352 ~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 352 INSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988 9999988777666655544
No 139
>PRK03545 putative arabinose transporter; Provisional
Probab=99.33 E-value=3.3e-11 Score=126.07 Aligned_cols=173 Identities=10% Similarity=-0.046 Sum_probs=134.1
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGM 110 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 110 (568)
++...+..++....++....++++|+++..|.+..+.++..+.+.++..++.++.|+++||+ |||+.+ .+..+..++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~-~~~~~~~~~~ 284 (390)
T PRK03545 207 LVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRH-PSGFLL-IAIALLLVCL 284 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhcc-chhHHH-HHHHHHHHHH
Confidence 44445555556666666778888999888999999999999999999999999999999999 987654 4444444433
Q ss_pred HHH-HHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHH
Q 008355 111 TLL-TLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSI 189 (568)
Q Consensus 111 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (568)
... ... .+.+.+++..++.|++.+...+.....+.+..| ++ |++++++++...
T Consensus 285 ~~l~~~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~-~~------~~~~~g~~~~~~ 338 (390)
T PRK03545 285 LLLLPAA-------------------NSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAP-DA------TDVAMALFSGIF 338 (390)
T ss_pred HHHHHHh-------------------chHHHHHHHHHHHHHHHhcchHHHHHHHHHhCC-Cc------HHHHHHHHHHHH
Confidence 332 222 345667777788888888777777777777765 45 899999999999
Q ss_pred HHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcC
Q 008355 190 NIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGS 231 (568)
Q Consensus 190 ~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 231 (568)
++|..+||.++|++.+.+|++..|++.+...+++++......
T Consensus 339 ~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 339 NIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999999999998877777766655444
No 140
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.33 E-value=5.4e-12 Score=133.23 Aligned_cols=160 Identities=9% Similarity=-0.045 Sum_probs=130.7
Q ss_pred HHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCC
Q 008355 45 YYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKP 124 (568)
Q Consensus 45 ~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 124 (568)
..+...++|.|+++.+|.+..+.|++.+...++..++.++.|+++||. ++++.+..+.+..+++.++....
T Consensus 239 ~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~-------- 309 (417)
T PRK10489 239 ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSA-RPGLLMLLSTLGSFLAVGLFGLM-------- 309 (417)
T ss_pred HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhcc-CcchHHHHHHHHHHHHHHHHHcc--------
Confidence 356667889999888999999999999999999999999999999997 88888888877777776666554
Q ss_pred CCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhhee
Q 008355 125 SCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQ 204 (568)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~ 204 (568)
++.....+..++.|++.+...+...+++.|.+|++. |++++++++...++|..+||.+.|++.
T Consensus 310 -----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~~g~~l~G~l~ 372 (417)
T PRK10489 310 -----------PMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEM------LGRINGLWTAQNVTGDAIGAALLGGLG 372 (417)
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHH------HHHHHHHHHHHHhhhHhHHHHHHHHHH
Confidence 345556677778888888777777888999999887 999999999999999999999999999
Q ss_pred ccccchhhhhHHHHHHHHHHHHHHhc
Q 008355 205 MNVGWGWGFGIPAVAMAIAVVFFFSG 230 (568)
Q Consensus 205 ~~~g~~~~f~~~~~~~~~~~~~~~~~ 230 (568)
+.+|++..+++.++..++..++....
T Consensus 373 ~~~g~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 373 AMMTPVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHhchhhHHHHHHHHHHHHHHHHHHh
Confidence 99998888877665544444333333
No 141
>PRK12382 putative transporter; Provisional
Probab=99.32 E-value=1.6e-11 Score=128.43 Aligned_cols=163 Identities=13% Similarity=0.157 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhh
Q 008355 38 ECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTA 117 (568)
Q Consensus 38 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~ 117 (568)
.++....+..+..+++.|+++ .|.+ +.++....+.++..++.++.|++.||+ |||+.+..+..+..++..+....
T Consensus 225 ~~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~- 299 (392)
T PRK12382 225 LALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRF-GGVKVAIVSLLVETVGLLLLWLA- 299 (392)
T ss_pred HHHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhc-CCCeehHHHHHHHHHHHHHHHHc-
Confidence 344455666677788888865 5654 356666677778889999999999999 99999998888888877766654
Q ss_pred hccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhh
Q 008355 118 SVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVAS 197 (568)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p 197 (568)
.+.+..++..++.|++.+...+.....+.|.+|+++ |++++++++...++|..++|
T Consensus 300 ------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~~~g~~ig~ 355 (392)
T PRK12382 300 ------------------PTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQV------RGTALGGYAAFQDIAYGVSG 355 (392)
T ss_pred ------------------ccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 345667778888999999888888888899999888 99999999999999999999
Q ss_pred hhhhheeccccchhhhhHHHHHHHHHHHHHHh
Q 008355 198 SVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 198 ~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~ 229 (568)
.+.+++.+.+||+..|.+.+...+++.+..+.
T Consensus 356 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 356 PLAGMLATSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHhCchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999888777666655543
No 142
>PRK15075 citrate-proton symporter; Provisional
Probab=99.31 E-value=1.5e-11 Score=130.54 Aligned_cols=153 Identities=12% Similarity=0.105 Sum_probs=111.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHH-HH
Q 008355 35 LGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMT-LL 113 (568)
Q Consensus 35 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~-~~ 113 (568)
+...++....++.+..++|.|+++.+|++..+.++....+.++..++.+++|+++||+ |||+.+..+.+...+... ..
T Consensus 244 ~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~-g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 244 MLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRI-GRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHH
Confidence 3444456677888889999999988999999999888888899999999999999999 999988876554332221 11
Q ss_pred HHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH-HHHHHHh
Q 008355 114 TLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF-YLSINIG 192 (568)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~-~~~~~ig 192 (568)
.... .. .+.....+..++.+++.+...+....+..|.+|++. |++++++. +++..++
T Consensus 323 ~~~~--~~--------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~------rg~~~g~~~~~~~~~~ 380 (434)
T PRK15075 323 SWLV--AA--------------PSFARMLAVELWLSFLYGSYNGAMVVALTEVMPAEV------RTAGFSLAYSLATAIF 380 (434)
T ss_pred HHHH--cC--------------CchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCc------cchheeHHHHHHHHHH
Confidence 1110 00 123233333445556666666666788899999998 99999985 4444556
Q ss_pred HHHhhhhhhheeccccch
Q 008355 193 ALVASSVLVWIQMNVGWG 210 (568)
Q Consensus 193 ~~~~p~~~~~i~~~~g~~ 210 (568)
+.++|.+.+++.+..|++
T Consensus 381 g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 381 GGFTPAISTWLIHVTGDK 398 (434)
T ss_pred hhhHHHHHHHHHHhcCCc
Confidence 788999999999988864
No 143
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.30 E-value=1.9e-11 Score=130.56 Aligned_cols=176 Identities=15% Similarity=0.130 Sum_probs=124.0
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCc--hHHH-HHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGR--FWTI-ASFSII 105 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Gr--k~~~-~~~~~~ 105 (568)
+.+|..++..++....++++..++|.|+++..|++..+++.....+.++..++.+++|+++||+ ++ |+.. .....+
T Consensus 253 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~-~~~r~~~~~~~~~~l 331 (452)
T PRK11273 253 KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FRGNRGATGVFFMTL 331 (452)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCCcchHHHHHHHH
Confidence 4467777777788888889999999999998999999999988888999999999999999998 53 3322 222222
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
..++...+.+. +. .+....++..++.|.+..........+..|.+|+++ |++++|+.
T Consensus 332 ~~~~~~~~~~~---~~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~ 388 (452)
T PRK11273 332 VTIATIVYWLN---PA--------------GNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFT 388 (452)
T ss_pred HHHHHHHHHHh---cc--------------cChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhh------hhhHHHHH
Confidence 33333222221 11 223333444444444333222233345678999988 99999999
Q ss_pred HHHHHHhHHH-hhhhhhheeccccchhhhhHHHHHHHHHHHHHH
Q 008355 186 YLSINIGALV-ASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 186 ~~~~~ig~~~-~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
+...++|+.+ +|.+.|++.+.+||+..|++.++..+++++...
T Consensus 389 ~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 432 (452)
T PRK11273 389 GLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLI 432 (452)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 8888888654 799999999999999999887766666655444
No 144
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.30 E-value=1.4e-11 Score=129.00 Aligned_cols=156 Identities=17% Similarity=0.138 Sum_probs=123.5
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHH-
Q 008355 34 ILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTL- 112 (568)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~- 112 (568)
++....+.+...+....++|.|+.+++|++..+.+++.+...++..++.++.|+++||+ |||+.+.++.+...+....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~ 321 (405)
T TIGR00891 243 LVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWL-GRRKAYVCSLLAGQLLIIPV 321 (405)
T ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CchhhhHHHHHHHHHHHHHH
Confidence 33444444555566777899999999999999999999999999999999999999999 9999988877654332222
Q ss_pred HHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHh
Q 008355 113 LTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIG 192 (568)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig 192 (568)
.... .+.+.+.+..++.++..++..+..++++.|.+|+++ |++++|+.+...++|
T Consensus 322 ~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~g 376 (405)
T TIGR00891 322 FAIG-------------------ANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQ------RAAGLGFTYQLGNLG 376 (405)
T ss_pred HHhC-------------------CchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcch------hHHHhhHHHHHHHHH
Confidence 2211 234455556566777777777888899999999988 999999999999999
Q ss_pred HHHhhhhhhheecccc-chhhhhH
Q 008355 193 ALVASSVLVWIQMNVG-WGWGFGI 215 (568)
Q Consensus 193 ~~~~p~~~~~i~~~~g-~~~~f~~ 215 (568)
..++|.+.|++.+..| |+..+..
T Consensus 377 ~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 377 GALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred HHHHHHHHHHHHHhccccchhHHh
Confidence 9999999999999988 8766554
No 145
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.30 E-value=5.1e-11 Score=125.16 Aligned_cols=177 Identities=13% Similarity=0.031 Sum_probs=131.9
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHH-HHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIA-SFSIIYC 107 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~-~~~~~~~ 107 (568)
|.++...+..++....+++...++|.|++ ++|++..+.+.+.+...++..++.++.|+++||+ |||+.+. .+.+...
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~l~~~ 299 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVA-ELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKL-GWMNTVRWFGGVGCG 299 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhh-cchhHHHHHHHHHHH
Confidence 44667777778888888999999999885 5899999999999999999999999999999999 9888764 3333333
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++...+....... ..+.+..++..++.|++.+...+ ....+.|.. +++ |++++|+.+.
T Consensus 300 ~~~~~l~~~~~~~--------------~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~-~~~------~g~~~g~~~~ 357 (402)
T TIGR00897 300 IFTLALYYIPQHF--------------GHSFAVALIIAIALGIFLAGYVP-LAAVFPTLA-PKH------KGAAMSVLNL 357 (402)
T ss_pred HHHHHHHHHHHcc--------------CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhC-cch------hHHHHHHHHH
Confidence 3333332221100 02355566667777887776544 345556654 446 9999999999
Q ss_pred HHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHh
Q 008355 188 SINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~ 229 (568)
..++|..++|.+++.+.+.+||...|++.++..+++.++..+
T Consensus 358 ~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 358 SAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred HHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888776666555443
No 146
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.30 E-value=2.1e-11 Score=129.44 Aligned_cols=177 Identities=15% Similarity=0.079 Sum_probs=121.8
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccC--chHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMG--RFWTIASFSIIY 106 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~G--rk~~~~~~~~~~ 106 (568)
+.++.+.+..++....++++..++|.|+.+++|++..+.+...+.+.++..++.+++|+++||+.+ |+.......+..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~ 322 (434)
T PRK11663 243 PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGI 322 (434)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHH
Confidence 345666666777777778888899999988899999999999999999999999999999999822 223222221111
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY 186 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (568)
.+....+... +. .+.....+..+..|++...........++|.+|+++ |+++.|+.+
T Consensus 323 ~~~~~~~~~~---~~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 379 (434)
T PRK11663 323 LLSVGSLWLM---PF--------------ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEA------AGAATGFVG 379 (434)
T ss_pred HHHHHHHHHc---cc--------------ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhh------HHhHHHHHH
Confidence 1111111111 11 122222333333443322222233456688888877 999999999
Q ss_pred HHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHH
Q 008355 187 LSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
...++|..++|.+.|++.+..||+..|+..+++.+++.+...
T Consensus 380 ~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~ 421 (434)
T PRK11663 380 LFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLL 421 (434)
T ss_pred HHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888776665554443
No 147
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.30 E-value=5.6e-10 Score=112.45 Aligned_cols=129 Identities=12% Similarity=-0.016 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHhCC---Ch----hhhhhhHHHHHHHHHhhhhhHHHHhhhccCchH-HHHHHHHHHHHHHHHHHHhhhc
Q 008355 48 MSTNLVNYLQKQLNQ---GN----VTASNNVTNWSGTCYITPLIGAFLADSYMGRFW-TIASFSIIYCLGMTLLTLTASV 119 (568)
Q Consensus 48 ~~~~l~~yl~~~lg~---s~----~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~-~~~~~~~~~~i~~~~~~~~~~~ 119 (568)
.+..+|+|+++..+. ++ ...+...++..+..++..|+-|.++|+. |+|| .+-+...+..+..+.+.++
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~-g~Rk~~~~~f~~i~i~~~~~L~~i--- 109 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYP-GPRKKFFGFFTAIGIISTFLLWFI--- 109 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccC-CCcchHHHHHHHHHHHHHHHHHHh---
Confidence 346688899887655 33 3356667778888889999999999999 7555 5555555556666666665
Q ss_pred cCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhh
Q 008355 120 SGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSV 199 (568)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~ 199 (568)
|. ..+++...+..++..++.........+++.|..++++ -++..+.-+....+|+.+.-++
T Consensus 110 ~~-------------~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~------~~riS~lg~~~gylgs~i~li~ 170 (438)
T COG2270 110 PP-------------GSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN------MGRISGLGWALGYLGSVILLIF 170 (438)
T ss_pred CC-------------CchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc------cCcccccccccccccchHHHHH
Confidence 21 1345666666777888888888889999999999887 4555555444555665554443
No 148
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.29 E-value=5e-11 Score=124.27 Aligned_cols=159 Identities=14% Similarity=0.152 Sum_probs=123.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhh
Q 008355 38 ECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTA 117 (568)
Q Consensus 38 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~ 117 (568)
.+...+.+.....++|.|+++ .|.+..+.+...+...++..+++++.|+++||+ |+|+++..+..+..++.+... .
T Consensus 209 ~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~-~~~~~l~~~~~~~~~~~~~~~-~- 284 (381)
T PRK03633 209 CIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF-GRLLVLRVQVFVVILGSIAML-S- 284 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc-CcHHHHHHHHHHHHHHHHHHh-h-
Confidence 333334444555778888875 699999999999999999999999999999999 999999888777766654432 1
Q ss_pred hccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhh
Q 008355 118 SVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVAS 197 (568)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p 197 (568)
.......+++.|++.+...|...+.+.|..|+++ ++...+.++...++|..+||
T Consensus 285 --------------------~~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~~lG~~igp 338 (381)
T PRK03633 285 --------------------QAAMAPALFILGAAGFTLYPVAMAWACEKVEHHE------LVAMNQALLLSYTVGSLLGP 338 (381)
T ss_pred --------------------hHHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHH------HHHHHHHHHHHHHHHHHHHH
Confidence 1123345566777777778888888899988876 77778888888999999999
Q ss_pred hhhhheeccccchhhhhHHHHHHHHHHHH
Q 008355 198 SVLVWIQMNVGWGWGFGIPAVAMAIAVVF 226 (568)
Q Consensus 198 ~~~~~i~~~~g~~~~f~~~~~~~~~~~~~ 226 (568)
.++|++.+++||++.|.+.+...++..+.
T Consensus 339 ~~~G~l~~~~g~~~~f~~~~~~~l~~~~~ 367 (381)
T PRK03633 339 SFTAMLMQNYSDNLLFIMIASVSFIYLLM 367 (381)
T ss_pred HHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 99999999999999998877666555433
No 149
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.29 E-value=4.1e-11 Score=127.17 Aligned_cols=168 Identities=15% Similarity=0.069 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHH-h
Q 008355 38 ECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTL-T 116 (568)
Q Consensus 38 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~-~ 116 (568)
.++....+|++..|+|.|+++++|.+..+.+...+...+...++.++.|+++||+ |||+.+.++.++.++....... .
T Consensus 252 ~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~-grr~~~~~~~~~~~~~~~~~~~~~ 330 (432)
T PRK10406 252 TAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKI-GRRTSMLCFGSLAALFTVPILSAL 330 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHHHHHHHHHHHH
Confidence 3344778899999999999999999998988888888888888899999999999 9999887766544333322211 1
Q ss_pred hhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHH-HhHHH
Q 008355 117 ASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSIN-IGALV 195 (568)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~-ig~~~ 195 (568)
.. . .+....+....+..++.+...+....+.+|.+|++. |++++|+.+...+ +++..
T Consensus 331 ~~--~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~------r~t~~g~~~~~g~~~~g~~ 388 (432)
T PRK10406 331 QN--V--------------SSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV------RALGVGLSYAVANALFGGS 388 (432)
T ss_pred Hc--C--------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc------cchhhhHHHHHHHHHHHhH
Confidence 00 0 112222211122223333333456678899999999 9999999665544 44555
Q ss_pred hhhhhhheecccc-chhhhhHHHHHHHHHHHHHHh
Q 008355 196 ASSVLVWIQMNVG-WGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 196 ~p~~~~~i~~~~g-~~~~f~~~~~~~~~~~~~~~~ 229 (568)
.|.+.+.+ +..| |...++..++..+++.+..++
T Consensus 389 ~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 389 AEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHH
Confidence 88877866 4445 555566555555555544444
No 150
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.27 E-value=4.3e-11 Score=128.88 Aligned_cols=179 Identities=12% Similarity=0.061 Sum_probs=131.5
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHH-HHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVT-NWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLG 109 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~-~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 109 (568)
.+.+.+..++.....+....+.++|+.+++|++..+.+++.. ...++..++.+++|+++||+ |+|+.+.++.+..++.
T Consensus 224 ~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~-g~~~~l~i~~~l~~l~ 302 (491)
T PRK11010 224 AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRL-SLFRALMIFGILQGVS 302 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHH
Confidence 344444455666666666778888988889999999999875 55678899999999999999 9999887766655554
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHH
Q 008355 110 MTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSI 189 (568)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (568)
.+........+ .+...+.+..++..++.|...+...++..+..+++. +++.+++.+...
T Consensus 303 ~l~~~~l~~~~---------------~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~------~~t~~gl~~s~~ 361 (491)
T PRK11010 303 NAGYWLLSITD---------------KNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSF------SATQFALLSALS 361 (491)
T ss_pred HHHHHHHHhcc---------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC------cHHHHHHHHHHH
Confidence 43322211100 233334444555554555555666788888888887 888999999999
Q ss_pred HHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcC
Q 008355 190 NIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGS 231 (568)
Q Consensus 190 ~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 231 (568)
++|..+++.+.|++.+.+||+..|.+.+++.++++++....+
T Consensus 362 ~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~ 403 (491)
T PRK11010 362 AVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCR 403 (491)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998989999999999999999988887777766665544
No 151
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.27 E-value=4.2e-11 Score=120.42 Aligned_cols=185 Identities=15% Similarity=0.053 Sum_probs=147.0
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.|+.|.+.+..+..-.++-++..++|.|+++++|.+..++|.....+.+...+.++.+|+++||+ |.+|+.++....++
T Consensus 217 ~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~-Gg~rv~~~~f~~~~ 295 (417)
T COG2223 217 NKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRI-GGRRVTLAVFVGMA 295 (417)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhc-cchhHHHHHHHHHH
Confidence 56689999999999999999999999999999999999999999999999999999999999999 99898888888888
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++..+.....+.. ....+...++...+..++..|.-...+..++...+|++ -+...|+...
T Consensus 296 ~~~~~l~~~~~~~------------~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~-------~G~v~G~vga 356 (417)
T COG2223 296 LAAALLSLFLTGF------------GHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKE-------TGAVTGIVGA 356 (417)
T ss_pred HHHHHHHcccccc------------ccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhh-------hhHHHHHHHH
Confidence 8777776551100 01123444444444445555555556778888888763 6888999999
Q ss_pred HHHHhHHHhhhhhhheecccc-chhhhhHHHHHHHHHHHHHHhcCc
Q 008355 188 SINIGALVASSVLVWIQMNVG-WGWGFGIPAVAMAIAVVFFFSGSR 232 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~~~~~~~~~~~~ 232 (568)
..++|+..-|...+...+..| +...|++...+.+++.++.+....
T Consensus 357 ~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~ 402 (417)
T COG2223 357 IGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYA 402 (417)
T ss_pred hccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998888887 889998888777777776555443
No 152
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.27 E-value=7.7e-11 Score=125.19 Aligned_cols=185 Identities=15% Similarity=0.086 Sum_probs=154.6
Q ss_pred CcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCch--HHHHHHHH
Q 008355 27 NWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRF--WTIASFSI 104 (568)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk--~~~~~~~~ 104 (568)
+.|+++..++..++.+-+..++......|.++++|++..+...+.....+.+.++.++.|++.||+ |.| ++++++.+
T Consensus 279 ~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~-g~k~~~~l~~~l~ 357 (477)
T PF11700_consen 279 KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRF-GPKTKRTLLISLI 357 (477)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCchhHHHHHHHH
Confidence 456788888888999999999999999999999999999999999999999999999999999999 999 88888877
Q ss_pred HHHHHHHHHHH--hhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhh
Q 008355 105 IYCLGMTLLTL--TASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFF 182 (568)
Q Consensus 105 ~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (568)
++.+..+...+ ..... ...+.+.+++.-++.|+..|+.++..-++.+++.|+++ .+..|
T Consensus 358 ~~~~i~~~g~~G~~~~~~-------------g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~------e~efF 418 (477)
T PF11700_consen 358 LWIIIPLYGLFGFWPSFF-------------GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGR------EAEFF 418 (477)
T ss_pred HHHHHHHHHHHHhhhccc-------------CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCch------hhHHH
Confidence 66443332222 21100 11467778888889999999999999999999999998 89999
Q ss_pred hhHHHHHHHhHHHhhhhhhheecccc-chhhhhHHHHHHHHHHHHHHhcC
Q 008355 183 NWFYLSINIGALVASSVLVWIQMNVG-WGWGFGIPAVAMAIAVVFFFSGS 231 (568)
Q Consensus 183 ~~~~~~~~ig~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 231 (568)
|++.+.....+.+||.+.+.+.+..| -|+.++...++.+++++++....
T Consensus 419 gly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 419 GLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999999999999998887 88888877777777776665443
No 153
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.26 E-value=5.3e-11 Score=128.60 Aligned_cols=148 Identities=18% Similarity=0.154 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 008355 47 GMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSC 126 (568)
Q Consensus 47 ~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 126 (568)
....++|.|+++++|++..+.+++.+...++..++.+++|+++||+ |||+.+.++.++..++.+..... +.
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~-g~~~~~~~~~~~~~~~~~~~~~~---~~----- 363 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWL-GTRKAYVCSLLISQLLIIPVFAI---GG----- 363 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHhhc---cc-----
Confidence 4567899999889999999999999999999999999999999999 99999888766655554433322 11
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheecc
Q 008355 127 DKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMN 206 (568)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~ 206 (568)
.+.+.+.+..++.+....+..+..+.++.|.+|+++ |++++++++...++|..+||.++|.+.+.
T Consensus 364 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~~~~~g~~lgp~l~g~l~~~ 428 (496)
T PRK03893 364 ---------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQ------RAAGLGFTYNVGALGGALAPILGALIAQR 428 (496)
T ss_pred ---------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHH------hhcccchhhhhhhHHHHHHHHHHHHHhcc
Confidence 233334444444433333445677788899999888 99999999999999999999999999999
Q ss_pred ccchhhhhHHHH
Q 008355 207 VGWGWGFGIPAV 218 (568)
Q Consensus 207 ~g~~~~f~~~~~ 218 (568)
+||+..+.+.+.
T Consensus 429 ~g~~~~~~~~~~ 440 (496)
T PRK03893 429 LDLGTALASLSF 440 (496)
T ss_pred CChHHHHHHHHH
Confidence 999988765543
No 154
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.24 E-value=7.8e-11 Score=125.78 Aligned_cols=171 Identities=11% Similarity=0.013 Sum_probs=136.0
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhc-cCchHHHHHHH--HH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSY-MGRFWTIASFS--II 105 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~-~Grk~~~~~~~--~~ 105 (568)
+.++..+...++..++++....+++.|+++ +|++..+++++.++..++..++.+++|+++||. .++|+...++. +.
T Consensus 241 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 319 (455)
T TIGR00892 241 RGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLF 319 (455)
T ss_pred chHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHH
Confidence 446666677777888888888899999864 899999999999999999999999999999984 14444443333 22
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
..++.+++... .+.+.+++.+++.|++.+...+...+++.|.+|+++ +++.++++
T Consensus 320 ~~l~~ll~~~~-------------------~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~------~g~~~g~~ 374 (455)
T TIGR00892 320 NGLTHLLCALA-------------------GDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQR------FSSAVGLV 374 (455)
T ss_pred HHHHHHHHHHh-------------------chHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHH------HhhHHhHH
Confidence 23333333333 346677888999999999999999999999999888 99999999
Q ss_pred HHHHHHhHHHhhhhhhheeccc-cchhhhhHHHHHHHHHHH
Q 008355 186 YLSINIGALVASSVLVWIQMNV-GWGWGFGIPAVAMAIAVV 225 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~~~-g~~~~f~~~~~~~~~~~~ 225 (568)
+...++|..+||.++|++.+.. +|++.|++.++..+++.+
T Consensus 375 ~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 375 TIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 9999999999999999999887 499999988776655544
No 155
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.23 E-value=8.2e-11 Score=125.06 Aligned_cols=179 Identities=14% Similarity=0.088 Sum_probs=123.7
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
+.++...+..++.....+++..++|.|+++..|++..+.++....+.+...++.+++|+++||+ |+++....+.....+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-~~~~~~~~~~~~~~~ 329 (438)
T TIGR00712 251 KLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKV-FKGNRGATGVFFMTL 329 (438)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCcccHHHHHHHHH
Confidence 3456666677777778889999999999998999999999999999999999999999999999 754433333322221
Q ss_pred HH---HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 109 GM---TLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 109 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
.. ..+... +. .+.+......++.|++..+..........|.+|+++ |+++.|+.
T Consensus 330 ~~~~~~~~~~~---~~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~ 386 (438)
T TIGR00712 330 VTIAVIVYWMN---PA--------------GNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKA------AGTAAGFT 386 (438)
T ss_pred HHHHHHHHHhc---CC--------------CchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhh------eeeehhhh
Confidence 11 111111 11 123333333444454433222222345678899888 99999999
Q ss_pred HHHHHHhH-HHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcC
Q 008355 186 YLSINIGA-LVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGS 231 (568)
Q Consensus 186 ~~~~~ig~-~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 231 (568)
+...++|+ .++|.+.|.+.+..||...|++.+...+++.+..+...
T Consensus 387 ~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 433 (438)
T TIGR00712 387 GLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 433 (438)
T ss_pred chHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 88888875 68999999999999999998877766655555544433
No 156
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.22 E-value=1.5e-10 Score=123.68 Aligned_cols=171 Identities=10% Similarity=0.023 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 008355 46 YGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPS 125 (568)
Q Consensus 46 ~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 125 (568)
..+..+.+ ++.+++|++..+.++......++..++.+++|+++||+ |||+.+.++.++.+++..++++.......
T Consensus 301 ~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 375 (481)
T TIGR00879 301 NAIMYYSP-TIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRF-GRRPLLLIGAAGMAICLFVLGILGASFVT--- 375 (481)
T ss_pred eehHHHHH-HHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchHHHHHHHHHHHHHHHHHHHHhhcccC---
Confidence 33444444 44557899998888888889999999999999999999 99999999888777777666532110100
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheec
Q 008355 126 CDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQM 205 (568)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~ 205 (568)
. ++...+...+....++.+.......+....++.|.+|+++ |+++.++.+...++|+.++|.+.+++.+
T Consensus 376 ----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~~~~~~~~~~~~~lg~~i~~~~~~~~~~ 444 (481)
T TIGR00879 376 ----G-SSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSL------RPKGISIAVAANWLANFIVGFLFPTMLE 444 (481)
T ss_pred ----C-cccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000022222222223222223334666777899999988 9999999999999999999999999998
Q ss_pred cccchhhhhHHHHHHHHHHHHHHhcCc
Q 008355 206 NVGWGWGFGIPAVAMAIAVVFFFSGSR 232 (568)
Q Consensus 206 ~~g~~~~f~~~~~~~~~~~~~~~~~~~ 232 (568)
..+|++.|++.+++.+++.++.....+
T Consensus 445 ~~~~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 445 SIGVGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred hcCccceehhHHHHHHHHHHHHheecc
Confidence 889999998887776666655544433
No 157
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.21 E-value=2.7e-10 Score=119.83 Aligned_cols=172 Identities=12% Similarity=-0.129 Sum_probs=128.5
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLG 109 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 109 (568)
.++...+...+....++......|.|+.+++|++..+.++......++..++.++.|+++||+ |+|+.+.++.+..+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~~g 294 (406)
T PRK15402 216 RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR-PLRSLIRMGLWPMVAG 294 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHH
Confidence 345555555555666666667788898889999999999888777888889999999999999 9999999988887777
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHH
Q 008355 110 MTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSI 189 (568)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (568)
..+......... .+...++++.++.|+|.+...+......... ++++ |++..+.+++..
T Consensus 295 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~-~~~~------~g~~~~~~~~~~ 353 (406)
T PRK15402 295 LLLAALATVISS--------------HAYLWLTAGLSLYAFGIGLANAGLYRLTLFS-SDVS------KGTVSAAMGMLS 353 (406)
T ss_pred HHHHHHHHHccc--------------ccHHHHHHHHHHHHHHHHHHhhhHHHHHhhh-cccc------ccHHHHHHHHHH
Confidence 777665421111 2355567778888999888776665544333 3355 999999999999
Q ss_pred HHhHHHhhhhhhheeccccchhhhhHHHHHHHHH
Q 008355 190 NIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIA 223 (568)
Q Consensus 190 ~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~ 223 (568)
.+|..+|+.+.+++.+..++....+..++..++.
T Consensus 354 ~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~ 387 (406)
T PRK15402 354 MLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLW 387 (406)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHH
Confidence 9999999999999988877665555544433333
No 158
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.21 E-value=4.1e-09 Score=111.37 Aligned_cols=163 Identities=14% Similarity=0.129 Sum_probs=116.7
Q ss_pred HHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhc--cC--chHHHHHHHHHHHHHHHHHHHhhhccCCCCC
Q 008355 50 TNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSY--MG--RFWTIASFSIIYCLGMTLLTLTASVSGLKPS 125 (568)
Q Consensus 50 ~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~--~G--rk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 125 (568)
.....|+++++|+++.+.....+...+- -...++.|.++|-+ +| ||+-++++.++.+++...++.. |.
T Consensus 10 ~~~~~~l~~~l~ls~~~~~~~~~~~~lP-w~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~---~~---- 81 (433)
T PF03092_consen 10 LAIYPFLKDDLGLSPAQLQRLSSLASLP-WSIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALL---PA---- 81 (433)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhCc-hHHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhc---cc----
Confidence 3445688999999999877655444333 36788899999998 33 5555566666665555555543 21
Q ss_pred CCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheec
Q 008355 126 CDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQM 205 (568)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~ 205 (568)
...+.....+..++..+|.+....+.-+++.|....+... |+...+..+....+|.+++..++|.+.+
T Consensus 82 --------~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~----~g~lqS~~~~~~~~G~lv~~~l~G~l~~ 149 (433)
T PF03092_consen 82 --------SESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES----RGDLQSFVWGVRSVGSLVGSLLSGPLLD 149 (433)
T ss_pred --------ccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch----hHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 1123444555667778888888889999999988655422 7888899999999999999999999999
Q ss_pred cccchhhhhHHHHHHHHHHHHHHhcCc
Q 008355 206 NVGWGWGFGIPAVAMAIAVVFFFSGSR 232 (568)
Q Consensus 206 ~~g~~~~f~~~~~~~~~~~~~~~~~~~ 232 (568)
..+++..|.+.+++..+..+......+
T Consensus 150 ~~~~~~~f~i~~~~~~l~~~~~~~~~~ 176 (433)
T PF03092_consen 150 SFGPQGVFLISAALPLLMLIVALFLLE 176 (433)
T ss_pred cCCCeEEehHHHHHHHHHHHHHHHhhh
Confidence 999999999887766666554444444
No 159
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.19 E-value=4.3e-10 Score=114.29 Aligned_cols=177 Identities=15% Similarity=0.129 Sum_probs=145.5
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
+.++..+...++...+.|...+++.+++++..|+|...+++++..|.++..++.+++|+++|| +.|+.+....++.++
T Consensus 211 p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr--~~~~~l~~~~~l~a~ 288 (394)
T COG2814 211 PGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR--GPRRALIAALLLLAL 288 (394)
T ss_pred chHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc--cchhHHHHHHHHHHH
Confidence 457888888999999999999999999999999999999999999999999999999999999 788888887777777
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
....+.+.. .+.+...+..++.|++........+.-+++ ..++. +..+.+++...
T Consensus 289 ~~l~l~~~~------------------~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~------~~~a~sl~~aa 343 (394)
T COG2814 289 ALLALTFTG------------------ASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDA------ADLAGSLNVAA 343 (394)
T ss_pred HHHHHHHhc------------------chHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCc------hHHHHHHHHHH
Confidence 766666541 235556666666777777655555555555 33445 88999999999
Q ss_pred HHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCc
Q 008355 189 INIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSR 232 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 232 (568)
.|+|..+|..++|.+.+++|+....+..++..++++++.+...+
T Consensus 344 ~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~ 387 (394)
T COG2814 344 FNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSAR 387 (394)
T ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999888888777665444
No 160
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.19 E-value=3.1e-10 Score=118.33 Aligned_cols=168 Identities=10% Similarity=-0.095 Sum_probs=132.5
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
|.++..++..++....+.....+++.|++ +.|.+..+.|...+...++..+..++.|++.||+ |+|+.+..+.+..++
T Consensus 205 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~l~~~~~~~~~ 282 (382)
T PRK11128 205 PTVWRFLLCVSLLQGSHAAYYGFSAIYWQ-AAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRW-SARDLLLLSAICGVV 282 (382)
T ss_pred hhHHHHHHHHHHHHHHhHhHHHHHHHHHH-HCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHH
Confidence 44566666677777777777788899986 5899999999999988888889999999999999 999999988888888
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH-H
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY-L 187 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~ 187 (568)
+..+.+.. ++.+.+++..++.|++.+...+....+..+. ++++ +++..+.+. .
T Consensus 283 ~~~~~~~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~~~ 336 (382)
T PRK11128 283 RWGLMGST-------------------TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSE------VIRLQALYSAL 336 (382)
T ss_pred HHHHHHhh-------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhh------hHHHHHHHHHH
Confidence 77666655 4577788889999999988888888877775 4444 677888765 5
Q ss_pred HHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHH
Q 008355 188 SINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVV 225 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~ 225 (568)
...+|..+||.++|.+.+.+|+ ..|+..++..+++++
T Consensus 337 ~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 337 AMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPALF 373 (382)
T ss_pred HHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHH
Confidence 6678889999999999999887 456655555444443
No 161
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.18 E-value=1e-10 Score=121.05 Aligned_cols=162 Identities=13% Similarity=0.160 Sum_probs=120.4
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHH--H
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSII--Y 106 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~--~ 106 (568)
+.++.+.+..++.......+..+++.|+++.+|.+..+.+...+.+.++..++.++.|+++||+.+||+........ .
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~ 295 (379)
T TIGR00881 216 KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALI 295 (379)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 45667777777788888888899999999999999999999999999999999999999999862444433222111 1
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY 186 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (568)
.++....... +. .+.....+..++.|+..++..+....+..|.+|+++ |+++.++++
T Consensus 296 ~~~~~~~~~~---~~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~ 352 (379)
T TIGR00881 296 IVSLLVYWLN---PA--------------ANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKA------AGTAAGFVG 352 (379)
T ss_pred HHHHHHHhcC---cc--------------hhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcch------hHHHHHHHH
Confidence 1111111111 11 234445555566666555555666778899999988 999999999
Q ss_pred HHHHHhHHHhhhhhhheeccccchhhh
Q 008355 187 LSINIGALVASSVLVWIQMNVGWGWGF 213 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g~~~~f 213 (568)
...++|..++|.+.|.+.+.+||++.|
T Consensus 353 ~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 353 FFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 999999999999999999999998765
No 162
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.17 E-value=4.5e-10 Score=120.60 Aligned_cols=173 Identities=9% Similarity=-0.008 Sum_probs=115.7
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchH-------HHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFW-------TIASFS 103 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~-------~~~~~~ 103 (568)
.|.+.+..++.....+.+..++|.|+.+++|++..+++.+.+.+.++..++.+++|+++||+ |||+ ...+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~-~~r~~~~~r~~~~~~~~ 332 (476)
T PLN00028 254 TWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVA-ARRFGMRGRLWALWIVQ 332 (476)
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-HHhcCcchhHHHHHHHH
Confidence 45555555555556667778899999988999999999999999999999999999999999 8752 222222
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhh
Q 008355 104 IIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFN 183 (568)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (568)
++..+..++.... .+.....+..++.+++.+...+...+++.+..| ++ |+...+
T Consensus 333 ~l~~i~~~~~~~~-------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g 386 (476)
T PLN00028 333 TLGGVFCIWLGRA-------------------NSLGAAIVVMILFSIFVQAACGATFGIVPFVSR-RS------LGVISG 386 (476)
T ss_pred HHHHHHHHHhccc-------------------chHHHHHHHHHHHHHHHHHhhhhhcccCcccCh-hh------chhhhh
Confidence 2222222222222 223334444455555554444455555666544 45 899999
Q ss_pred hHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcC
Q 008355 184 WFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGS 231 (568)
Q Consensus 184 ~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 231 (568)
+.+.+.++|+.++|.+.+ ..+..+|+..|++.+++.+++.++.++.+
T Consensus 387 ~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 387 LTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred hhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 988888888888887654 23345699999888877777766655544
No 163
>PRK10504 putative transporter; Provisional
Probab=99.17 E-value=3.7e-10 Score=121.21 Aligned_cols=159 Identities=11% Similarity=0.003 Sum_probs=126.8
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.|.....+...++..+.+.....+.|.|++..+|.+..+.++......++..++.++.|+++||+ |||+++..+.++.+
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~-g~~~~~~~~~~~~~ 338 (471)
T PRK10504 260 TRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRF-GYRRVLVATTLGLA 338 (471)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHH
Confidence 34556666777777777666666788888888999999999998888888888889999999999 99999998888777
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++..++..... . .+.+.+.+..++.|++.+...+....++.+.+|+++ ++.++++.+.
T Consensus 339 ~~~~~~~~~~~--~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 396 (471)
T PRK10504 339 LVSLLFMLVAL--L--------------GWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNL------ASSGNSLLSM 396 (471)
T ss_pred HHHHHHHhccc--c--------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHh------ccchHHHHHH
Confidence 77666554310 0 223444455667788888888888899999999887 9999999999
Q ss_pred HHHHhHHHhhhhhhheeccccc
Q 008355 188 SINIGALVASSVLVWIQMNVGW 209 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~ 209 (568)
..++|..+|+.+++.+.+..|+
T Consensus 397 ~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 397 IMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999988776655
No 164
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.16 E-value=5.4e-10 Score=105.81 Aligned_cols=166 Identities=14% Similarity=0.088 Sum_probs=132.9
Q ss_pred cCCCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHH
Q 008355 24 KTGNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFS 103 (568)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~ 103 (568)
.++....+|++....++...+.+=+...-+.+.++.+|+|+.+++.+.+.......+.+++.|.++||+ |++-....+.
T Consensus 259 v~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~-G~n~~wv~~a 337 (459)
T KOG4686|consen 259 VNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKY-GFNLWWVASA 337 (459)
T ss_pred ccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhh-cceehhHHHH
Confidence 444566788888888888777776777778999999999999999999999999999999999999999 9987666554
Q ss_pred H-HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhh
Q 008355 104 I-IYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFF 182 (568)
Q Consensus 104 ~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (568)
. ...++-..+.++ .+.-+.+..+.|+.......+.++.++-..|+++ .|+++
T Consensus 338 ~~~tl~~H~~l~Ft---------------------~lsPy~~m~~lGLsysllAcslWP~va~~vpE~q------LGTay 390 (459)
T KOG4686|consen 338 CILTLLGHSGLFFT---------------------FLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQ------LGTAY 390 (459)
T ss_pred HHHHHHHhhhHHhh---------------------hccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHH------hcchH
Confidence 4 344444555554 3345666777888887777677888888999888 99999
Q ss_pred hhHHHHHHHhHHHhhhhhhheecccc---chhhhhHHH
Q 008355 183 NWFYLSINIGALVASSVLVWIQMNVG---WGWGFGIPA 217 (568)
Q Consensus 183 ~~~~~~~~ig~~~~p~~~~~i~~~~g---~~~~f~~~~ 217 (568)
+..+...|+|-.+-|++.|.+.+.-| |--.|++..
T Consensus 391 gf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~ 428 (459)
T KOG4686|consen 391 GFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLII 428 (459)
T ss_pred HHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHH
Confidence 99999999999999999999998654 444454443
No 165
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.15 E-value=2.4e-09 Score=108.11 Aligned_cols=84 Identities=13% Similarity=0.017 Sum_probs=70.7
Q ss_pred chhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheecc---------
Q 008355 136 AQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMN--------- 206 (568)
Q Consensus 136 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~--------- 206 (568)
.++..+.++.++.|.|.+...++..+++++..++++ +.+.+++.+....+|..++|.+++.+...
T Consensus 8 ~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~------~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~ 81 (310)
T TIGR01272 8 RYYVLFLGALFVLASGLTILQVAANPYVSILGPIET------AASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQV 81 (310)
T ss_pred hHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcch------HHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhh
Confidence 457889999999999999999999999999999888 89999999999999999999999876632
Q ss_pred -------ccchhhhhHHHHHHHHHHH
Q 008355 207 -------VGWGWGFGIPAVAMAIAVV 225 (568)
Q Consensus 207 -------~g~~~~f~~~~~~~~~~~~ 225 (568)
.+|+++|++.+...++..+
T Consensus 82 ~~~~~~~~~~~~~yl~ia~~~~~~~i 107 (310)
T TIGR01272 82 ATANAEAAKVHTPYLLLAGALAVLAI 107 (310)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999866554443333
No 166
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.14 E-value=4.6e-10 Score=117.95 Aligned_cols=177 Identities=10% Similarity=0.093 Sum_probs=116.5
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHH-HHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWS-GTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~-~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
|..+.+++..++.+........+.+.|+.+++|++..+.+++.+... ++..++.+++|++.||+ |||+.+..+.+...
T Consensus 209 ~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~-g~~~~l~~~~~~~~ 287 (402)
T PRK11902 209 RGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRL-GLYRSLMLFGVLQA 287 (402)
T ss_pred cCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHH
Confidence 33444444445544443333345556777889999999999886654 46788999999999999 99998887776655
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHH----HHHHhhcccCcccccccccccCCCCCchhhhhhhhhhh
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVAL----YLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFN 183 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (568)
+...........+ .+.+.+++.. +..|++.+...+....++.+.+|.++ .+
T Consensus 288 l~~l~~~~~~~~~---------------~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----------~~ 342 (402)
T PRK11902 288 VSNLGYWVLAVTP---------------KHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFSATQ----------YA 342 (402)
T ss_pred HHHHHHHHHHhcC---------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHH----------HH
Confidence 5544332211101 1234444443 34456666667777777777776544 34
Q ss_pred hHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcC
Q 008355 184 WFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGS 231 (568)
Q Consensus 184 ~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 231 (568)
++....++|..+++.++|.+.+.+||+..|.+.+++.++++++....+
T Consensus 343 ~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~ 390 (402)
T PRK11902 343 LLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMR 390 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh
Confidence 555555677776677899999999999999998877777666554433
No 167
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.13 E-value=7.2e-09 Score=109.10 Aligned_cols=362 Identities=14% Similarity=0.088 Sum_probs=207.3
Q ss_pred hhHhhHHHHHHHHHHHHH---HHHHHHHHHHhCCChh-hhhhhHHHH----HHHHHhhhhhHHHHhhhccCchHHHHHHH
Q 008355 32 RFILGNECCERLAYYGMS---TNLVNYLQKQLNQGNV-TASNNVTNW----SGTCYITPLIGAFLADSYMGRFWTIASFS 103 (568)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~---~~l~~yl~~~lg~s~~-~~g~~~~~~----~~~~~i~~~~~G~laDr~~Grk~~~~~~~ 103 (568)
+.+....++..++++... .+...+.....+.+.. +.+...... .+...+..+..|.++||+ |||..+...+
T Consensus 21 ~~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~~~~~~~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~-grk~~L~~~~ 99 (463)
T KOG2816|consen 21 RHLEPLLFLYMFSWGLSSTVMTNVILYLACTFGDDYQLENGLLLGVKQVTAGLLTLISSPLIGALSDRY-GRKVVLLLPL 99 (463)
T ss_pred hHHHHHHHHHHHHHHhcCcchhhhhhhhhcccccCccchhhhhhhHHHHhhHHHHHHHHhhhHHhhhhh-hhhhhHHHHH
Confidence 444444555555554444 4444455444443322 234444444 567778899999999999 9999999998
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHH--hhcccCcccccccccccCCCCCchhhhhhhhh
Q 008355 104 IIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIA--LGTGGIKPCVSSFGADQFDETDDGEREKKSSF 181 (568)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g--~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 181 (568)
....+..+...+. .+.+++ +.+ -+.+.+.+...++++|....++ |...
T Consensus 100 ~~~~l~~~~~~~~---------------------~~~~~~---~~~l~g~~~~~~s~~~a~vadis~~~~------R~~~ 149 (463)
T KOG2816|consen 100 FGTILPALCLLFQ---------------------GYWFFL---LLGLSGGFSAIFSVGFAYVADISSEEE------RSSS 149 (463)
T ss_pred HHHHHhHHHHHHH---------------------HHHHhh---hcccccchhhhhhhhhhheeeccchhH------HHHH
Confidence 8888877777665 122222 332 3334556677888999998887 9999
Q ss_pred hhhHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceeeecCCCCC-hhHHHHHHHHHHHhhccc
Q 008355 182 FNWFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYRIQKPGGS-PLTRIMQVIVASFRKSNV 260 (568)
Q Consensus 182 ~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 260 (568)
+++.+.....+..++|.+++.+.+..|.-.+|+++++..++..+-.....++...++.... +..
T Consensus 150 ~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~--------------- 214 (463)
T KOG2816|consen 150 IGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLR--------------- 214 (463)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccccccc---------------
Confidence 9999999999999999999999999999999999988887777665555554332221110 000
Q ss_pred ccCCcchhhhhhhhhhhhhccCccccCCccchhhhhhhhhccccccCCCCCCCcccchhhHHHHHHHHHHHHHHHhhhHH
Q 008355 261 VVPADKSLLYETADEECNIQGSRKLESTSKFKFFDKAAVETQTDRVKGSADPWRLCTVTQVEELKAIIRLLPVWASGIVF 340 (568)
Q Consensus 261 ~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (568)
.+...+...+. ..++++...+. -.++..+...+...+....-
T Consensus 215 -----------------------~~~~~~~~~~~--------------~~~~~~~~~~~-~~~r~~l~l~l~~~~~~~~~ 256 (463)
T KOG2816|consen 215 -----------------------ELTPGSLDSSH--------------VADAFQSLTKV-GPDRLLLLLLLVAFLSSLPE 256 (463)
T ss_pred -----------------------ccCCCcccchh--------------hhhhhhhhccc-CCCccchHHHHHHHHHHHHH
Confidence 00000000000 00011000000 00011111111111111111
Q ss_pred HhhhccccceeEeecccccCCCCCCccc-CchhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHH
Q 008355 341 ATVYSQMSTMFVLQGNTMDQHMGPNFKI-PSASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLIS 419 (568)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~ 419 (568)
+......-.++.... . +++. ..+.+.........+.. .+..|...+. .+..+.+.+|+..-
T Consensus 257 ~~~~~~~~~~yl~~~------f--~w~~~~~s~~~~~~~~~~~i~~----l~~~~~l~~~------l~~~~~i~lGl~~~ 318 (463)
T KOG2816|consen 257 AGGASDVLLLYLKAK------F--GWNKKEFSDLLSLVSILGIISQ----LLLLPLLSSI------LGEKRLISLGLLSE 318 (463)
T ss_pred hcCceeEEEEEEeee------c--CcCHHHHHHHHHHHHHHHHHHH----HHHHHHHHHH------HhhhhHhhHHHHHH
Confidence 111110111222211 1 1111 11112222222222222 2222233332 22223678888888
Q ss_pred HHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHH
Q 008355 420 IFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAV 499 (568)
Q Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~l 499 (568)
.+..++.++.. ..| .+..............|+..+++....+++.+|+++++......+
T Consensus 319 ~~~~~~~af~~--------------------~~w-~~~~~~v~~~~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l 377 (463)
T KOG2816|consen 319 FLQLLLFAFAT--------------------ETW-MMFAAGVVVALAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGL 377 (463)
T ss_pred HHHHHHHHHhc--------------------cch-hhhHHHHHHHhhcchhHHHHhHHHhhcccccccchhhHHHHHHHH
Confidence 88888888664 333 333345556666777899999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhc
Q 008355 500 GNYLSTLLVTIVTKVTT 516 (568)
Q Consensus 500 g~~lg~~l~~~i~~~~~ 516 (568)
++.++|.+-+.+...+.
T Consensus 378 ~~~~~~~~~~~i~~~t~ 394 (463)
T KOG2816|consen 378 SGVVSPALYGNIFALTL 394 (463)
T ss_pred hhhhhHHHHHHHHHHHH
Confidence 99999999887765543
No 168
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.13 E-value=7.6e-10 Score=111.79 Aligned_cols=163 Identities=13% Similarity=0.043 Sum_probs=125.2
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHH--hCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQ--LNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSII 105 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~ 105 (568)
.+..++.++..++....--++..|++.|+.+. +|++..+.+...+.+..+..++++.+++++||+ |+||.+.++.++
T Consensus 139 ~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~-g~~~~l~~~~~l 217 (310)
T TIGR01272 139 FTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMI-SQGRYLAFNAFL 217 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHH
Confidence 34455555656665556667788999999854 799999999999999999999999999999999 999999888777
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
.+++..+.... .+.. ...+.++.|++.+..+|...+...+.+|++. +++.++.
T Consensus 218 ~~~~~~l~~~~-------------------~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~-------~~asai~ 270 (310)
T TIGR01272 218 AVLLSIGAALT-------------------HGYV-AMWFVLALGLFNSIMFPTIFSLALNALGRHT-------SQGSGIL 270 (310)
T ss_pred HHHHHHHHHHc-------------------CCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh-------hhhHHHH
Confidence 77766544433 1122 2234557899999999999999988887643 3444554
Q ss_pred HHHHHHhHHHhhhhhhheeccccchhhhhHHHHH
Q 008355 186 YLSINIGALVASSVLVWIQMNVGWGWGFGIPAVA 219 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~ 219 (568)
....+|+.+.|.+.|.+.+..|.+.+|++..++
T Consensus 271 -~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 271 -CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred -HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 456799999999999999999988888765543
No 169
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.12 E-value=4.4e-10 Score=117.81 Aligned_cols=172 Identities=9% Similarity=0.063 Sum_probs=130.1
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHh---CCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQL---NQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSII 105 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---g~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~ 105 (568)
|.++..++..++....+.....+.+.|+++.+ +.+....|.+.+...+...++.+..|++.||+ |||+.+.++.++
T Consensus 215 ~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~-g~~~~l~~~~~l 293 (396)
T TIGR00882 215 RKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRI-GAKNALLIAGTI 293 (396)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccchhHHHHHHH
Confidence 34455555555555555556667888887765 45556778888888888899999999999999 999999998888
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhh-
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNW- 184 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~- 184 (568)
.+++..+.... .+.+.+++.+++.|++.+........+..+..+++. ++++.+.
T Consensus 294 ~~l~~~~~~~~-------------------~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~------~at~~~~~ 348 (396)
T TIGR00882 294 MSVRIIGSSFA-------------------TTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRL------SATIYLIG 348 (396)
T ss_pred HHHHHHHHHhc-------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcce------EEEeehHH
Confidence 88777665554 346667778888888876555555556666677666 7777766
Q ss_pred HHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHH
Q 008355 185 FYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVF 226 (568)
Q Consensus 185 ~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~ 226 (568)
++....+|..++|.++|++.+..||+.+|.+.++..++..+.
T Consensus 349 ~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~ 390 (396)
T TIGR00882 349 FQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 678899999999999999999999999999877666555443
No 170
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.12 E-value=6.2e-10 Score=117.34 Aligned_cols=164 Identities=10% Similarity=0.015 Sum_probs=116.0
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHH-HhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHH-HHHHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQK-QLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTI-ASFSIIYC 107 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~-~~~~~~~~ 107 (568)
.++...+..++....++++..++|.|+++ ..|.+..+++.......++..++.+++|+++||+ +||+.. ....+..+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~-~~r~~~~~~~~~~~~ 321 (412)
T TIGR02332 243 AIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRL-KERKHHTALPYLFAA 321 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhccc-CccHHHHHHHHHHHH
Confidence 45667777788888899999999999987 3477888889999999999999999999999999 877643 33333333
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++.+ .... . .+....+.+..+.++|.....+.......|.+|+++ |++++|+.+.
T Consensus 322 ~~~~-~~~~---~---------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~a~g~~~~ 376 (412)
T TIGR02332 322 AGWL-LASA---T---------------DHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQA------RAIAIAVINA 376 (412)
T ss_pred HHHH-HHHh---c---------------CCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHH------HHHHHHHHHH
Confidence 3322 2211 0 111212222223333333333334455567788877 9999999999
Q ss_pred HHHHhHHHhhhhhhheecccc-chhhhhHHHHH
Q 008355 188 SINIGALVASSVLVWIQMNVG-WGWGFGIPAVA 219 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g-~~~~f~~~~~~ 219 (568)
..++|+.++|.+.+.+.+..| |++.|++.++.
T Consensus 377 ~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 377 TGNIGSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred hhhhhhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 999999999999999999875 99988876653
No 171
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.11 E-value=4.6e-10 Score=115.55 Aligned_cols=155 Identities=12% Similarity=0.082 Sum_probs=129.6
Q ss_pred ceehhHhhHHHHHHHHHHHHH-HHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMS-TNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~-~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
|.++..+...++....++... .+.|.|.++.+|.+..+.+.+.....++..++.++.|++.||+ |||+.+..+.+..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 288 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYF-KRMALMTGAIFVIG 288 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-chhHHHHHHHHHHH
Confidence 445666666677777776666 7778888877999999999999999999999999999999999 99999988877777
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++..+..... .+.+.+++..++.|++.+...+...+++.|.+|+++ |+++.++++.
T Consensus 289 ~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 344 (365)
T TIGR00900 289 LAILVVGLTP------------------PNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAEL------LGRVFGAQFS 344 (365)
T ss_pred HHHHHHHhhc------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHH
Confidence 6666665541 136667788889999999999999999999999888 9999999999
Q ss_pred HHHHhHHHhhhhhhheecccc
Q 008355 188 SINIGALVASSVLVWIQMNVG 208 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g 208 (568)
..++|..++|.++|++.+.+|
T Consensus 345 ~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 345 LSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999887654
No 172
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.11 E-value=1.4e-10 Score=123.11 Aligned_cols=163 Identities=15% Similarity=0.076 Sum_probs=123.7
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.|.++.+++..++....++....+.+.|.+..++ +..+.++......++..++.++.|+++||+ |||+++..+.++.+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-g~~~~~~~~~~~~~ 298 (437)
T TIGR00792 221 NDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKF-GRKILFAGGILLMV 298 (437)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHH
Confidence 3456667777777777777665556666655566 455677777778899999999999999999 99999999988877
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCch-hhhhhhhhhhhHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDG-EREKKSSFFNWFY 186 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~-~~~~r~~~~~~~~ 186 (568)
++.+...+.. .+.+.+++..++.|++.+...+...++++|..|.++.. ....+|.++++++
T Consensus 299 ~~~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 360 (437)
T TIGR00792 299 LGYLIFFFAG------------------SNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRT 360 (437)
T ss_pred HHHHHHHHcc------------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHH
Confidence 7776665431 23455666777889999988899999999987643210 0012788999999
Q ss_pred HHHHHhHHHhhhhhhheeccccch
Q 008355 187 LSINIGALVASSVLVWIQMNVGWG 210 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g~~ 210 (568)
+...+|..+++.+.|++.+..||.
T Consensus 361 ~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 361 FVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999999988777764
No 173
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.10 E-value=1.3e-09 Score=113.96 Aligned_cols=175 Identities=15% Similarity=-0.005 Sum_probs=126.4
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHH-HHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSG-TCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~-~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
.++..+...++..........+.++|+++ .|++..++|++...... ...++.+++|++.||+ |+|+.+..+.++..+
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~ 286 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRA-GLWRTFILGVGLAGS 286 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHH
Confidence 34555556666667677777788888875 79999999998887764 5567789999999999 999999887766533
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCC-CCchhhhhhhhhhhhHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDE-TDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~ 187 (568)
............. ..+....+....+.+++.|...+...+...+..++ ++ +++.+++.+.
T Consensus 287 ~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 347 (390)
T TIGR02718 287 LALLWFAQAAFWL-------------APGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQ------AGTDVTAVQS 347 (390)
T ss_pred HHHHHHHHHHccc-------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc------hHHHHHHHHH
Confidence 3322221111000 01233344444555666777777777777777765 55 8999999999
Q ss_pred HHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHH
Q 008355 188 SINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVV 225 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~ 225 (568)
..++|..++|.++|++.+..||+..|++.+++.+++++
T Consensus 348 ~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 348 TRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999887766555543
No 174
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.08 E-value=1.4e-09 Score=112.17 Aligned_cols=154 Identities=12% Similarity=0.012 Sum_probs=118.0
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
+..+.+.+..++....++....++|.|+++ .|.+..+.+...+.+.++..++.++.|+++||+.+||+.+.++.++.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~ 275 (355)
T TIGR00896 197 PLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLV 275 (355)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHH
Confidence 345655666667777888888999999975 7999999999999999999999999999999993456666777777777
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
+.+.+.+. +. .+. . ...++.|++.|...|...+.+.+..++++ .++...++.+..
T Consensus 276 ~~~~~~~~---~~--------------~~~--~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~-----~~g~~~~~~~~~ 330 (355)
T TIGR00896 276 GLCGLLFA---PM--------------HGL--W-AWALVLGLGQGGAFPLALTLIGLRSRQAA-----QAAALSAMAQSI 330 (355)
T ss_pred HHHHHHHh---hh--------------hHH--H-HHHHHHHHhhhhHhHHHHHHHHHhccCHH-----HHHHHHHHHHHH
Confidence 76666554 11 111 1 13467799999988887777766555432 178888988888
Q ss_pred HHHhHHHhhhhhhheecccc
Q 008355 189 INIGALVASSVLVWIQMNVG 208 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g 208 (568)
.++|..++|.+.|++.+..|
T Consensus 331 ~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 331 GYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 89999999999999988776
No 175
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.07 E-value=1e-09 Score=110.57 Aligned_cols=173 Identities=13% Similarity=0.087 Sum_probs=144.0
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.+++...++..++.+=+.-++......|..+++|++..+..++....++.++++.++.|++.||+ |.|++++++.++..
T Consensus 251 ~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rf-g~k~vl~~~lvi~~ 329 (438)
T COG2270 251 RKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERF-GSKPVLMIGLVILS 329 (438)
T ss_pred ccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCceeehHHHHHHH
Confidence 34777777888888888888888999999999999999999999999999999999999999999 99999999988877
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
+.++..-+. .....+++.-++.|...|+.++.+-++.++..|+++ -++.||+|++
T Consensus 330 ~~~~~~~~~-------------------~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k------~~~fFglyal 384 (438)
T COG2270 330 IAALYLIFL-------------------EGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK------EGRFFGLYAL 384 (438)
T ss_pred HHHHHHHHc-------------------cccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc------ccceeehhhh
Confidence 766655544 223445566678899999999999999999999998 8999999999
Q ss_pred HHHHhHHHhhhhhhheecccc-chhhhhHHHHHHHHHHHH
Q 008355 188 SINIGALVASSVLVWIQMNVG-WGWGFGIPAVAMAIAVVF 226 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~~~~~~ 226 (568)
....+..+||.+.+.+.+..| -|..+....+...+.+++
T Consensus 385 tgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~ 424 (438)
T COG2270 385 TGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLL 424 (438)
T ss_pred hhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhh
Confidence 999999999999998888765 555555444444444443
No 176
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.05 E-value=2.3e-09 Score=113.43 Aligned_cols=148 Identities=16% Similarity=0.065 Sum_probs=108.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccC
Q 008355 42 RLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSG 121 (568)
Q Consensus 42 ~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~ 121 (568)
....+.+..++|.|+++ .|.+..+.+...+...++..++.++.|+++||+ |||+.+..+.++..+........ +.
T Consensus 244 ~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~-~~~~~~~~~~~~~~~~~~~~~~~---~~ 318 (426)
T PRK12307 244 FGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRI-GLKKTFSIGLLMSFLFIFPLFRI---PQ 318 (426)
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHHHHHHHHHHHHHHHH---cc
Confidence 33444567788988875 699998999888889999999999999999999 99999988877666555444332 11
Q ss_pred CCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhh
Q 008355 122 LKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLV 201 (568)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~ 201 (568)
.+...+....+..+.+..+..+..+.++.|.+|++. |++++|+.+...++|+.++|.+.+
T Consensus 319 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~~~~~~~gp~~~g 378 (426)
T PRK12307 319 --------------DNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEV------RGLGTGLIYNLAATSGTFNSMAAT 378 (426)
T ss_pred --------------ccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHH------HhhhhhHHHHHHhHHHHHHHHHHH
Confidence 112212122222223333334566778899999988 999999999999999999999999
Q ss_pred heeccccchhhhh
Q 008355 202 WIQMNVGWGWGFG 214 (568)
Q Consensus 202 ~i~~~~g~~~~f~ 214 (568)
++.+.+|+....+
T Consensus 379 ~l~~~~g~~~~~~ 391 (426)
T PRK12307 379 WLGITMGLGAALT 391 (426)
T ss_pred HHHHcccHHHHHH
Confidence 9999888665433
No 177
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.05 E-value=2.6e-09 Score=114.53 Aligned_cols=177 Identities=18% Similarity=0.025 Sum_probs=123.1
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHH--------
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTI-------- 99 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~-------- 99 (568)
++.++...+..++....++.+..++|.|+++.+|.+..+.++..+...++..++.+++|+++||+ ++|+..
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~-~~~~~~~~~~~~~~ 338 (465)
T TIGR00894 260 SLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFL-KSSKTLSLTAARKI 338 (465)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCcHHHHHHH
Confidence 45678888889999999999999999999999999999999999999999999999999999998 544221
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhh
Q 008355 100 ASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKS 179 (568)
Q Consensus 100 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 179 (568)
..+......+..+.... ... .+....++...+.+.+.+...+.......|..|. . ++
T Consensus 339 ~~~~~~~~~~~~~~~~~-~~~---------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~------~g 395 (465)
T TIGR00894 339 FNGIGGLGPGIFAYALP-YLS---------------AAFYLTIIILTLANAVSSGPLAGVLINSLDLAPR-F------LG 395 (465)
T ss_pred HHHHHHHHHHHHHHHHH-HcC---------------CchHHHHHHHHHHHHHhhhhhhhhhhchhhcChh-H------HH
Confidence 11111111111111111 000 1233334444444555555555555555566554 5 89
Q ss_pred hhhhhHHHHHHHhHHHhhhhhhheeccc---cchhhhhHHHHHHHHHHHHHH
Q 008355 180 SFFNWFYLSINIGALVASSVLVWIQMNV---GWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 180 ~~~~~~~~~~~ig~~~~p~~~~~i~~~~---g~~~~f~~~~~~~~~~~~~~~ 228 (568)
.+.++.+...++|+.++|.+.+++.+.. +|+..|.+.++..+++.+...
T Consensus 396 ~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 396 FIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 9999999999999999999999987653 388888887766666655443
No 178
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.05 E-value=2.3e-09 Score=111.47 Aligned_cols=164 Identities=11% Similarity=0.064 Sum_probs=119.7
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
|..+...+...+....++....+.|.|+++++|.++.+.+.+.+...++..++.++.|++.||+ |||+.+..+.+...+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~-~~~~~~~~~~~~~~~ 284 (385)
T TIGR00710 206 KMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKW-GAKSLLRMGLILFAV 284 (385)
T ss_pred chhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Confidence 3445555555666667777778889999989999999999999999999999999999999999 999999888777777
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
+..++......+. .....+++..++.|++.+...+.......|..| ++ |+++.++++..
T Consensus 285 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~ 343 (385)
T TIGR00710 285 SAVLLEITAILGL--------------GSWAMIIGPMMFVGIGNSMISSIAMAYALEDFP-HV------AGTASALFGTL 343 (385)
T ss_pred HHHHHHHHHHhcc--------------chHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc-cc------chHHHHHHHHH
Confidence 7666654421111 223445556677889888888888888888776 45 89999987776
Q ss_pred HHH-hHHHhhhhhhheeccccchhhhhH
Q 008355 189 INI-GALVASSVLVWIQMNVGWGWGFGI 215 (568)
Q Consensus 189 ~~i-g~~~~p~~~~~i~~~~g~~~~f~~ 215 (568)
... |...+|. .+.+.+..+|...+..
T Consensus 344 ~~~~g~i~~~~-~~~~~~~~~~~~~~~~ 370 (385)
T TIGR00710 344 RLVLGAIVGYL-VSLIHGNTAWPMSLSC 370 (385)
T ss_pred HHHHHHHHHHH-HHhccccChHHHHHHH
Confidence 654 5555555 4555555455544443
No 179
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.05 E-value=2.9e-09 Score=111.09 Aligned_cols=171 Identities=8% Similarity=0.034 Sum_probs=118.3
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGM 110 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 110 (568)
.+..+...++.+...+....++++|+.+.+|++..+.++..+...++..++.++.|+++||+ |+|+.+..+..+..++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~-~~~~~~~~~~~~~~i~~ 279 (382)
T PRK10091 201 PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY-SPLRIAAVTDFIIVLAL 279 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc-CchhHHHHHHHHHHHHH
Confidence 34444444454555555566778888888999999999999999999999999999999999 99999988887777776
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCccccccccccc-CCCCCchhhhhhhhhhhhHHHHH
Q 008355 111 TLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQ-FDETDDGEREKKSSFFNWFYLSI 189 (568)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~-~~~~~~~~~~~r~~~~~~~~~~~ 189 (568)
++..... ++.+...+..++.+.|.+...+.......+. .+++. ++.+ ..+...
T Consensus 280 ~~~~~~~------------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~------~~~~--~~~~~~ 333 (382)
T PRK10091 280 LMLFFFG------------------GMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGEL------LGAA--GGQIAF 333 (382)
T ss_pred HHHHHHH------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchH------HHHH--HHHHHH
Confidence 5554321 1233344445555665554444444333333 33333 4443 335677
Q ss_pred HHhHHHhhhhhhheecc-ccchhhhhHHHHHHHHHHHHHH
Q 008355 190 NIGALVASSVLVWIQMN-VGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 190 ~ig~~~~p~~~~~i~~~-~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
++|..+||.++|++.+. .+|++.+.+.++..++.+....
T Consensus 334 ~~g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 334 NLGSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred HHHHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 89999999999998885 6899999888766655554433
No 180
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.05 E-value=1.3e-08 Score=110.26 Aligned_cols=200 Identities=14% Similarity=0.169 Sum_probs=150.0
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
+.+.+++....+.+..+.+.......-+.+.++++.++.|++.+.+-++..+...+..+++-|. -|-|.+-+|.+++++
T Consensus 96 k~fl~~l~~~~~~q~l~~~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~-HrPr~Ig~G~~~m~l 174 (735)
T KOG3626|consen 96 KMFLVLLSLAAFAQGLYVGYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRG-HRPRWIGIGLVLMGL 174 (735)
T ss_pred chHHHHHHHHHHHHHhhhhhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhcccc-CccceeeechhHHHH
Confidence 4445555555555555557777777788999999999999999999999999999999999998 899999999999999
Q ss_pred HHHHHHHhhhccCCCC------------C-----CC------------CCCC--CC-CCc-hhHHHHHHHHHHHhhcccC
Q 008355 109 GMTLLTLTASVSGLKP------------S-----CD------------KDAC--HP-TGA-QTAVTFVALYLIALGTGGI 155 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~------------~-----~~------------~~~~--~~-~~~-~~~~~~~~~~l~g~g~g~~ 155 (568)
+.+++++-+....--+ + ++ .+.+ ++ +.. -+..++++.++.|+|.-.+
T Consensus 175 gsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi 254 (735)
T KOG3626|consen 175 GSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPI 254 (735)
T ss_pred HHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCC
Confidence 9999875421110000 0 00 0111 12 222 3347888999999999999
Q ss_pred cccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheecc------------------cc-chhhhhHH
Q 008355 156 KPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMN------------------VG-WGWGFGIP 216 (568)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~------------------~g-~~~~f~~~ 216 (568)
++...+|+=|...+++ -...+|+.+....+|+++|-++++++... .| |+..|++.
T Consensus 255 ~tlGisYiDDnvk~~~------SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~ 328 (735)
T KOG3626|consen 255 FTLGISYIDDNVKKKN------SPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLIC 328 (735)
T ss_pred ccCCCccccccccccC------CcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHH
Confidence 9999999999988877 78889999999999999999988766421 13 77888888
Q ss_pred HHHHHHHHHHHHhcCceee
Q 008355 217 AVAMAIAVVFFFSGSRLYR 235 (568)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~ 235 (568)
+.+.++..+.++++.++.+
T Consensus 329 g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 329 GALLLFSAVPLFFFPKELP 347 (735)
T ss_pred HHHHHHHHHHHHhCcccCc
Confidence 8777777666666655443
No 181
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.05 E-value=2.5e-11 Score=130.69 Aligned_cols=186 Identities=13% Similarity=0.200 Sum_probs=3.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccC-
Q 008355 43 LAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSG- 121 (568)
Q Consensus 43 ~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~- 121 (568)
...++.+.....-+++.++++..++|++.+.+-++..+..++..++.+|. -|-|.+-.|.++.++|++++++-+.+..
T Consensus 16 ~~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~-hrprwig~g~~~~~~g~~l~~lPhf~~~~ 94 (539)
T PF03137_consen 16 MMVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRG-HRPRWIGIGALLMGLGSLLFALPHFLSGP 94 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc-CCcceeeecHHHHHHHHHHHhccHhhcCC
Confidence 56666666666778999999999999999999999999999999999998 8889999999999999998875332211
Q ss_pred C--CC----CC----CCCCC---------------C---C--CCchhHHHHHHHHHHHhhcccCcccccccccccCCCCC
Q 008355 122 L--KP----SC----DKDAC---------------H---P--TGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETD 171 (568)
Q Consensus 122 ~--~~----~~----~~~~~---------------~---~--~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 171 (568)
+ .. .+ +.+.| + + ....+..++++.++.|+|....++...+|+=|..++++
T Consensus 95 y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~ 174 (539)
T PF03137_consen 95 YSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKN 174 (539)
T ss_dssp ---------------------------------------------------------SSS--------------------
T ss_pred CccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccccc
Confidence 0 00 00 00112 1 1 22245778999999999999999999999999999888
Q ss_pred chhhhhhhhhhhhHHHHHHHhHHHhhhhhhheecc---------------------cc-chhhhhHHHHHHHHHHHHHHh
Q 008355 172 DGEREKKSSFFNWFYLSINIGALVASSVLVWIQMN---------------------VG-WGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 172 ~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~---------------------~g-~~~~f~~~~~~~~~~~~~~~~ 229 (568)
-+..+|+++....+|+.+|.++++.+... .| |+..|++.++..++..+-++.
T Consensus 175 ------splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~ 248 (539)
T PF03137_consen 175 ------SPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFF 248 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------CccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 78889999999999999999988766421 23 777787777666655555555
Q ss_pred cCceee
Q 008355 230 GSRLYR 235 (568)
Q Consensus 230 ~~~~~~ 235 (568)
++++.+
T Consensus 249 FPk~lp 254 (539)
T PF03137_consen 249 FPKKLP 254 (539)
T ss_dssp ------
T ss_pred CCccCC
Confidence 554443
No 182
>PRK10133 L-fucose transporter; Provisional
Probab=99.04 E-value=2.5e-09 Score=113.57 Aligned_cols=167 Identities=17% Similarity=0.203 Sum_probs=126.0
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHH-HHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYL-QKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLG 109 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl-~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 109 (568)
++...+..++.....++...+++.|+ ++.+|+++.+.+.....+.++..++.+++|++.||+ |||+++..+.++.+++
T Consensus 260 ~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 338 (438)
T PRK10133 260 WRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRF-APHKVLAAYALIAMAL 338 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHH
Confidence 34455555666667677777888886 567899999999999999999999999999999999 9999998887766655
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHH
Q 008355 110 MTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSI 189 (568)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (568)
..+..+. + +.. .+....+.|++.+...|...+...+.+|++ .+.+.++..+ .
T Consensus 339 ~~~~~~~---~----------------~~~-~~~~~~l~glg~~~i~P~~~s~a~~~~~~~-------~~~as~l~~~-~ 390 (438)
T PRK10133 339 CLISAFA---G----------------GHV-GLIALTLCSAFMSIQYPTIFSLGIKNLGQD-------TKYGSSFIVM-T 390 (438)
T ss_pred HHHHHHc---C----------------ChH-HHHHHHHHHHHHHHHHHHHHHHHHcccchh-------hccchhHHhH-H
Confidence 5544433 1 122 245567789999999999999999988764 3555665544 3
Q ss_pred HHhHHHhhhhhhheecccc-chhhhhHHHHHHHHHHHH
Q 008355 190 NIGALVASSVLVWIQMNVG-WGWGFGIPAVAMAIAVVF 226 (568)
Q Consensus 190 ~ig~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~~~~~~ 226 (568)
.+|+.++|.+.|.+.+..| -+..|++..+..+..+..
T Consensus 391 ~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 391 IIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred hccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 4678888888999988887 788888766555444433
No 183
>TIGR00895 2A0115 benzoate transport.
Probab=99.03 E-value=1.5e-09 Score=113.19 Aligned_cols=147 Identities=13% Similarity=0.040 Sum_probs=115.2
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLG 109 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 109 (568)
..+.+.+..++....++....++| ++.+++|.+..+.+...+...++..++.++.|+++||+ |||+.+.. ..+..+.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~-~~~~~~~ 327 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRL-GPRVTALL-LLLGAVF 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-chHHHHHH-HHHHHHH
Confidence 344555556666777777777888 66678999999999999999999999999999999999 99854443 3333333
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHH
Q 008355 110 MTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSI 189 (568)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (568)
..+..... .+...+++..++.|++.+...+...+++.|.+|+++ |++++++.+...
T Consensus 328 ~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~~~ 383 (398)
T TIGR00895 328 AVLVGSTL------------------FSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAI------RATGVGWAIGIG 383 (398)
T ss_pred HHHHHHHh------------------hCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHH------HHHHHHHHHHHH
Confidence 33332210 235556777788899999999999999999999988 999999999999
Q ss_pred HHhHHHhhhhhhhe
Q 008355 190 NIGALVASSVLVWI 203 (568)
Q Consensus 190 ~ig~~~~p~~~~~i 203 (568)
++|..++|.++|++
T Consensus 384 ~~g~~~g~~~~G~l 397 (398)
T TIGR00895 384 RLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHhHHhc
Confidence 99999999999875
No 184
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.03 E-value=2.2e-09 Score=115.95 Aligned_cols=155 Identities=10% Similarity=-0.030 Sum_probs=130.4
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.|......+..++....+++...++|.|+++.+|.|..++|.......++..++.++.|++.||+ |+|+.+..+.++.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~g~~~~~ 336 (495)
T PRK14995 258 HRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRL-GLRLVATGGMALSA 336 (495)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CchHHHHHHHHHHH
Confidence 34566667777777888888888999999999999999999999999999999999999999999 99999988888887
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++..++..... ..+.+..++..++.|+|.|...+.....+.+..|+++ ++.+.++++.
T Consensus 337 ~~~~~l~~~~~----------------~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 394 (495)
T PRK14995 337 LSFYGLAMTDF----------------STQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEK------AAAAGAIETM 394 (495)
T ss_pred HHHHHHHHhcC----------------CCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHh------cchHHHHHHH
Confidence 77766554311 1234445667788899999988888888888899888 9999999999
Q ss_pred HHHHhHHHhhhhhhheec
Q 008355 188 SINIGALVASSVLVWIQM 205 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~ 205 (568)
..++|..+|+.+.+.+.+
T Consensus 395 ~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 395 AYELGAGLGIAIFGLLLS 412 (495)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999988754
No 185
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.02 E-value=8.3e-09 Score=110.92 Aligned_cols=162 Identities=12% Similarity=0.074 Sum_probs=113.5
Q ss_pred HHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 008355 48 MSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCD 127 (568)
Q Consensus 48 ~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 127 (568)
...+.|. +.+++|.+....++......+...++.+++|+++||+ |||+.++.+.++.+++.+.++.....+.
T Consensus 290 ~~~~~p~-i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~-g~r~~~i~~~~~~~v~~~~l~~~~~~~~------ 361 (479)
T PRK10077 290 VLYYAPE-IFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKF-GRKPLQIIGALGMAIGMFSLGTAFYTQA------ 361 (479)
T ss_pred HHHHHHH-HHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHh-cChHHHHHhHHHHHHHHHHHHHHHhcCc------
Confidence 3334444 4456888877777777778888899999999999999 9999999999988888877664411010
Q ss_pred CCCCCCCCchhHHHHHHHHHHHhhccc-CcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhh-----
Q 008355 128 KDACHPTGAQTAVTFVALYLIALGTGG-IKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLV----- 201 (568)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~l~g~g~g~-~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~----- 201 (568)
.+. ......++.+.+.+. ..|....+++|.+|+++ |++++++.+...++|..+++.+.+
T Consensus 362 --------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~~g~~~~~~~~p~~~~~ 426 (479)
T PRK10077 362 --------PGI-VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAI------RGKALAIAVAAQWIANYFVSWTFPMMDKN 426 (479)
T ss_pred --------ccH-HHHHHHHHHHHHHhccccchhHHHhHhhCChhH------HHHHHHHHHHHHHHHHHHHHHHhHHHHhc
Confidence 112 222333344444433 34677899999999888 999999998888888888755544
Q ss_pred -heeccccchhhhhHHHHHHHHHHHHHHhcCc
Q 008355 202 -WIQMNVGWGWGFGIPAVAMAIAVVFFFSGSR 232 (568)
Q Consensus 202 -~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 232 (568)
++.+.++|++.|++.++..+++.++.+...+
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (479)
T PRK10077 427 SWLVAHFHNGFSYWIYGCMGVLAALFMWKFVP 458 (479)
T ss_pred cchhhhccCccHHHHHHHHHHHHHHHHHhccc
Confidence 4456788988888877665555555444333
No 186
>PRK10054 putative transporter; Provisional
Probab=99.01 E-value=2.9e-09 Score=111.57 Aligned_cols=175 Identities=10% Similarity=-0.029 Sum_probs=132.2
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHH--hCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQ--LNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSII 105 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~--lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~ 105 (568)
.|.++...+..++..+.+.....+++.|+... .+.+....+.+.....+......++.|++.||+ ++|+.+..+.++
T Consensus 205 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~l~~~~~~ 283 (395)
T PRK10054 205 DKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAA-NIRPLMTAGTLC 283 (395)
T ss_pred CceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccC-CchhHHHHHHHH
Confidence 34566666667777766666666777777543 455566677777777777777788999999999 999999988887
Q ss_pred HHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 106 YCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 106 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
.+++......+. ++.+.+.+..++.++|.+...|.....+.+..|++. |++.++..
T Consensus 284 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~------~~~~~~~~ 339 (395)
T PRK10054 284 FVIGLVGFIFSG------------------NSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGM------KASYFSAQ 339 (395)
T ss_pred HHHHHHHHHHcc------------------hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCccc------ceehHhHH
Confidence 777776665431 235556667788899998888888889999999887 88888875
Q ss_pred HHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHH
Q 008355 186 YLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
+ ...+|..+||.++|.+.+..|....|++.+....++.++.+
T Consensus 340 ~-~~~~G~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 340 S-LGWLGAAINPLVSGVILTTLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred H-HHHHHHHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHHH
Confidence 5 56689999999999999999988888776655554444433
No 187
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.01 E-value=3.3e-09 Score=114.00 Aligned_cols=173 Identities=13% Similarity=0.103 Sum_probs=145.7
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
+.+..++...++.++....+...+|.+.++.+|.+....|++.+++.++..++.++.+++.+|+ ++++.+..+.+.+++
T Consensus 218 ~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~-~~~~lv~~~~~~~a~ 296 (524)
T PF05977_consen 218 PPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRL-SSRRLVLLASLLFAL 296 (524)
T ss_pred hHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhccc-CcchhhHHHHHHHHH
Confidence 3445555555566666556667789999999999999999999999999999999999999998 999999988888888
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
+.+.++++ .+.+...+..++.|++.....+...+.+-+..|++. ||+.++++++.
T Consensus 297 ~~~~lal~-------------------~~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~------~GRv~si~~~~ 351 (524)
T PF05977_consen 297 ALLLLALS-------------------PSFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWV------RGRVFSIYQMV 351 (524)
T ss_pred HHHHHhcc-------------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HhHHHHHHHHH
Confidence 88888876 457777778888899988888888888888999988 99999999999
Q ss_pred HHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHH
Q 008355 189 INIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFF 227 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~ 227 (568)
...+..+|..+.|.+.+.+|-+..+.++++..++..++.
T Consensus 352 ~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 352 FFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988887776555554443
No 188
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.00 E-value=1.8e-09 Score=116.18 Aligned_cols=157 Identities=13% Similarity=0.110 Sum_probs=130.4
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.|.++...+..++..+.+++...++|.|+++.+|.+..+.++......++..++.++.|++.||+ |||+.+.++.++.+
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-~~~~~~~~g~~~~~ 332 (485)
T TIGR00711 254 YRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKI-DPRKLVTIGLILYA 332 (485)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CcHHHHHHHHHHHH
Confidence 34566667777888888888889999999999999999999999999999999999999999999 99999999888888
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++..++..... +. .+.+.++...++.|+|.+...+.......+..|+++ |+++.++++.
T Consensus 333 ~~~~~~~~~~~-~~--------------~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~------~g~~~~~~~~ 391 (485)
T TIGR00711 333 VGFYWRAFTFT-PD--------------TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHK------IARGSSLSNF 391 (485)
T ss_pred HHHHHHhccCC-CC--------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHH------HhHHHHHHHH
Confidence 77776653211 11 234556666788899998887777777778888877 9999999999
Q ss_pred HHHHhHHHhhhhhhheecc
Q 008355 188 SINIGALVASSVLVWIQMN 206 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~ 206 (568)
..++|+.+|+.+.+.+.++
T Consensus 392 ~~~~g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 392 TRQLGGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999887664
No 189
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.99 E-value=1.1e-08 Score=107.12 Aligned_cols=168 Identities=7% Similarity=-0.018 Sum_probs=122.1
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
|.++..+...++.....++...++++++.+++|++..+.+.+...+.++..++.++.|++.||. +++..+....+...+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~-~~~~l~~~~~~~~~~ 294 (394)
T PRK10213 216 PGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS-VKLALAGAPLVLAVS 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHH
Confidence 3345555555565666666667775555667899999999999999999999999999999996 555444433332333
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
+..+.... .+.+.+.+..++.|++.+...+..++++.+..| ++ +++..++....
T Consensus 295 ~~~l~~~~-------------------~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~------~~~~~~~~~~~ 348 (394)
T PRK10213 295 ALVLTLWG-------------------SDKIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQ------AEKAGSIQVAV 348 (394)
T ss_pred HHHHHHHh-------------------hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-cc------HHHHHHHHHHH
Confidence 33333333 235566777888899999999888888888887 33 55667777778
Q ss_pred HHHhHHHhhhhhhheeccccchhhhhHHHHHHHHH
Q 008355 189 INIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIA 223 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~ 223 (568)
.++|..+||.++|++.+..|++..+...++..++.
T Consensus 349 ~~lg~~~G~~l~G~l~~~~g~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 349 IQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLT 383 (394)
T ss_pred HHHHHHHHHHHHHHHHhccChhhHHHHHHHHHHHH
Confidence 89999999999999999999988888776544433
No 190
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.99 E-value=1.1e-08 Score=107.54 Aligned_cols=186 Identities=11% Similarity=0.028 Sum_probs=127.8
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
+..|.+.+..++...+|.++..++|.|+++.++ ............+...+.+|++|+++||+ |++|++.++.+...+
T Consensus 252 ~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~--~~~~l~~~~l~~l~~~l~rplgG~LADRi-G~~~vl~~~~i~~~i 328 (462)
T PRK15034 252 LHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFP--DVNILRLAFFGPFIGAIARSVGGAISDKF-GGVRVTLINFIFMAI 328 (462)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhc-CchHHHHHHHHHHHH
Confidence 347888888888888888888899999887653 33333334456788889999999999999 999999998887776
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCc---------------h
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDD---------------G 173 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~---------------~ 173 (568)
+....... .|. +...+.+.+.+..+...++.|.-..++.-++.+.+|+++. .
T Consensus 329 ~~~~~~l~--lp~-----------~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~ 395 (462)
T PRK15034 329 FSALLFLT--LPG-----------TGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQRE 395 (462)
T ss_pred HHHHHHHH--hcc-----------ccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhH
Confidence 66443332 121 0113456566655555555555556677777777774100 0
Q ss_pred hhhhhhhhhhhHHHHHHHhHHHhhhhhhheecccc-chhhhhHHHHHHHHHHHHHHhc
Q 008355 174 EREKKSSFFNWFYLSINIGALVASSVLVWIQMNVG-WGWGFGIPAVAMAIAVVFFFSG 230 (568)
Q Consensus 174 ~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~~~~~~~~~~ 230 (568)
.+.+-|.+.|+......+|+.+-|.+.+...+..| +...|+...+..++++++.+..
T Consensus 396 ~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 396 AVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 01125677788888999999999988787766654 8888888777777776665543
No 191
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.98 E-value=9.8e-09 Score=108.82 Aligned_cols=164 Identities=18% Similarity=0.175 Sum_probs=136.4
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.|..+.+++..++..+++.......+.|.+..+|.+ ...+.......+...++.++.++++||+ |+|+++..+.++.+
T Consensus 224 nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~-gk~~~~~~~~~~~~ 301 (428)
T PF13347_consen 224 NRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRF-GKKKVYIIGLLLAA 301 (428)
T ss_pred cchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHc-cceeehhhhHHHHH
Confidence 466778888888888888888888888888888877 5567778888999999999999999999 99999999999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchh-hhhhhhhhhhHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGE-REKKSSFFNWFY 186 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~ 186 (568)
++.++..+... .+.+.+++..++.|++.+...+...++++|..+.++.++ +.+.|..++.+.
T Consensus 302 ~~~~~~~~~~~-----------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~ 364 (428)
T PF13347_consen 302 LGFLLLFFLGP-----------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNS 364 (428)
T ss_pred HHHHHHHHHHh-----------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhh
Confidence 99888877621 367888899999999999999999999999998654221 112577888999
Q ss_pred HHHHHhHHHhhhhhhheeccccch
Q 008355 187 LSINIGALVASSVLVWIQMNVGWG 210 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g~~ 210 (568)
....+|..+++.+.+.+.+..|+.
T Consensus 365 ~~~k~~~~la~~i~g~~l~~~Gy~ 388 (428)
T PF13347_consen 365 FFIKIGQGLAGAIVGLLLALVGYD 388 (428)
T ss_pred hhhHHHHHHHHHHHHHHHHHhCcC
Confidence 999999999999998887665544
No 192
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.97 E-value=1.4e-07 Score=94.13 Aligned_cols=154 Identities=18% Similarity=0.112 Sum_probs=108.0
Q ss_pred HHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCc
Q 008355 57 QKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGA 136 (568)
Q Consensus 57 ~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (568)
-++.|++..+++.+.........+..++.|.++||+ |||+..++..++.+++++.-- . .
T Consensus 61 Y~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~-Grk~~cl~~cily~~scl~k~-~-------------------~ 119 (354)
T PF05631_consen 61 YESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRY-GRKKACLLFCILYSLSCLTKH-S-------------------S 119 (354)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHh-c-------------------c
Confidence 357999999999999999999999999999999999 999999988888877765322 2 4
Q ss_pred hhHHHHHHHHHHHhhcccCcccccccccccCCCCC-chhhhhhhhhhhhHH-HHHHHhHHHhhhhhhheeccccc--hhh
Q 008355 137 QTAVTFVALYLIALGTGGIKPCVSSFGADQFDETD-DGEREKKSSFFNWFY-LSINIGALVASSVLVWIQMNVGW--GWG 212 (568)
Q Consensus 137 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~~~~-~~~~ig~~~~p~~~~~i~~~~g~--~~~ 212 (568)
+...++++|++.|++.....++-.+.+.....++. +++ -.+.-++... ..+.+-++.+.+++-++.+..+. ..+
T Consensus 120 ~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~--~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaP 197 (354)
T PF05631_consen 120 NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQE--WLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAP 197 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH--HHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcch
Confidence 68889999999999999988888776643332222 111 1333333322 22333344444445455555544 788
Q ss_pred hhHHHHHHHHHHHHHHhcCce
Q 008355 213 FGIPAVAMAIAVVFFFSGSRL 233 (568)
Q Consensus 213 f~~~~~~~~~~~~~~~~~~~~ 233 (568)
|..+.+..+++.+++...+++
T Consensus 198 F~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 198 FDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred HHHHHHHHHHHHHHHHhcccc
Confidence 888887777777666555544
No 193
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.96 E-value=6.1e-09 Score=112.78 Aligned_cols=168 Identities=16% Similarity=0.124 Sum_probs=109.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhh------------hHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHH
Q 008355 36 GNECCERLAYYGMSTNLVNYLQKQLNQGNVTASN------------NVTNWSGTCYITPLIGAFLADSYMGRFWTIASFS 103 (568)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~------------~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~ 103 (568)
...++..+.+|++..+.|.+++ +.|++..+.+. ......++..++.++.++++||+ |||+.++++.
T Consensus 295 ~~~~~~~~~~y~~~~~~p~i~~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~-gRR~~l~~~~ 372 (502)
T TIGR00887 295 GSWFLLDIAFYGVNLNQKVILS-AIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDII-GRKPIQLMGF 372 (502)
T ss_pred HHHHHHHHHHHccccccHHHHH-HHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cchhHHHHHH
Confidence 3344556778888888888875 57887543321 12233445556788899999999 9999998888
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhh
Q 008355 104 IIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFN 183 (568)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (568)
++.+++..+.+....... .+ ..+....+...++..+..+....+.+|.+|++. |+++.+
T Consensus 373 ~~~~~~~~~l~~~~~~~~--------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~------R~~~~g 431 (502)
T TIGR00887 373 FILTVLFFVLGFAYNHLS--------------TH-GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRY------RSTAHG 431 (502)
T ss_pred HHHHHHHHHHHHHHHhcc--------------hh-HHHHHHHHHHHHHhcCCCchhhhhhhccCchhH------HHHHHH
Confidence 777776665554311000 11 111111111222223344566777899999999 999999
Q ss_pred hHHHHHHHhHHHhhhhhhheecc----------ccchhhhhHHHHHHHHHHHH
Q 008355 184 WFYLSINIGALVASSVLVWIQMN----------VGWGWGFGIPAVAMAIAVVF 226 (568)
Q Consensus 184 ~~~~~~~ig~~~~p~~~~~i~~~----------~g~~~~f~~~~~~~~~~~~~ 226 (568)
+.+....+|+.++|.+.+++.+. .++...|++.++..+++.+.
T Consensus 432 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~ 484 (502)
T TIGR00887 432 ISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILF 484 (502)
T ss_pred HHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHH
Confidence 99999999999999999988774 33455666665555544443
No 194
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.94 E-value=9.5e-09 Score=107.87 Aligned_cols=152 Identities=11% Similarity=0.036 Sum_probs=110.4
Q ss_pred HHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 008355 47 GMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSC 126 (568)
Q Consensus 47 ~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 126 (568)
....++|.|+++..+ ++.+.++..+...+.......+.+++.||.++.++.+..+.++..++..+++..
T Consensus 226 ~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~---------- 294 (400)
T PRK11646 226 QVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMV---------- 294 (400)
T ss_pred HHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHh----------
Confidence 345677888876555 667888887777766665555556666653276777777777777777666655
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheecc
Q 008355 127 DKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMN 206 (568)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~ 206 (568)
++.+.+.+..++.+++.+...|...+++.+..|+++ |++++++++...++|..+||.++|++.+.
T Consensus 295 ---------~~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~------~g~~~g~~~~~~~~g~~ig~~l~G~l~~~ 359 (400)
T PRK11646 295 ---------SNLQQLFTLICLFYIGSIIAEPARETLSASLADARA------RGSYMGFSRLGLALGGAIGYIGGGWLFDL 359 (400)
T ss_pred ---------hhHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCccc------chhhhhHHHHHHHHHHHhcccchHHHHHH
Confidence 235555666677888888888888999999999988 99999999999999999999999999876
Q ss_pred c---c-chhhhhHHHHHHHHHH
Q 008355 207 V---G-WGWGFGIPAVAMAIAV 224 (568)
Q Consensus 207 ~---g-~~~~f~~~~~~~~~~~ 224 (568)
. + ....+++.+...++..
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~ 381 (400)
T PRK11646 360 GKALNQPELPWMMLGIIGLITL 381 (400)
T ss_pred HhhcCCcchHHHHHHHHHHHHH
Confidence 4 2 2444444444444333
No 195
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.94 E-value=9e-09 Score=122.79 Aligned_cols=164 Identities=12% Similarity=0.037 Sum_probs=132.0
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChh-hhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNV-TASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~-~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
+.++..++..++..+..+.+..+++.|+.+.+|++.. +.+++.+...++..++.++.|+++||+ ++++.+.++.++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~-~~~~~~~~~~~~~~ 310 (1146)
T PRK08633 232 RVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRH-IELGLVPLGALGLA 310 (1146)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eEccchhHHHHHHH
Confidence 3455555556666666677778899999999999998 999999999999999999999999999 99999888888777
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++.+++.+. .+.+.+++..++.|++.+...+...+++.+.+|++. |++++++.++
T Consensus 311 ~~~~~~~~~-------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------rg~~~~~~~~ 365 (1146)
T PRK08633 311 LSLFLLPTA-------------------PSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKE------LGKVLAANNF 365 (1146)
T ss_pred HHHHHHHHh-------------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccc------hhhhhHHHHH
Confidence 777776655 346667777888899999988889999999999998 9999999999
Q ss_pred HHHHhHHHhhhhhhheec-cccchhhhhHHHH
Q 008355 188 SINIGALVASSVLVWIQM-NVGWGWGFGIPAV 218 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~-~~g~~~~f~~~~~ 218 (568)
..++|..+++.+++.+.. .+++...|++.+.
T Consensus 366 ~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~ 397 (1146)
T PRK08633 366 LQNVGMLLFLALTTLFSGLGLSPAGLFYLIAL 397 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 999999888887765543 2345455554443
No 196
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.88 E-value=3.2e-08 Score=102.48 Aligned_cols=167 Identities=10% Similarity=-0.041 Sum_probs=114.1
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCch---HHHHH-HH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRF---WTIAS-FS 103 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk---~~~~~-~~ 103 (568)
.|.+|.+.+..++....+|++..|+|.|+++ .|++.. .+.......+... +..++++||. .|| +.... ..
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~---~g~~~~~d~~-~r~~~r~~~~~~~~ 264 (368)
T TIGR00903 191 RKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGL---IGVAVIPDRV-ARAGLRSIYIRAAA 264 (368)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHH---HHHHHhhHHh-hhhhhHHHHHHHHH
Confidence 3567888889999999999999999999964 677754 4555444444444 4458888887 543 33222 33
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhh
Q 008355 104 IIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFN 183 (568)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (568)
+..++.....+.. .+....++...+.+++.....+...++.+|.+|++. |+++.|
T Consensus 265 ~~~a~~~~~~~~~-------------------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------rgt~~G 319 (368)
T TIGR00903 265 LLIAAFFLALAFE-------------------LNRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKEL------HGKAAG 319 (368)
T ss_pred HHHHHHHHHHHHc-------------------cccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhh------cCcccc
Confidence 3333333333322 112233444455667677777778889999999999 999999
Q ss_pred hHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHH
Q 008355 184 WFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFF 227 (568)
Q Consensus 184 ~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~ 227 (568)
+.+...++|+..+|.+.+.+.. |.+..|.+.++..+++.+..
T Consensus 320 ~~~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 320 AIGFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIA 361 (368)
T ss_pred hhhHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887663 66666766665555555443
No 197
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.88 E-value=1.6e-08 Score=120.62 Aligned_cols=182 Identities=9% Similarity=-0.043 Sum_probs=135.3
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.|.++..++..++.++.+..+..++|.|+++.+|.+..+.|++.+.+.++..++.++.|+++|+. ++++.+..+.++.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~-~~~~~~~~~~~~~~ 302 (1140)
T PRK06814 224 DKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGR-ITLLYVPIGALLMG 302 (1140)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCc-eeeeeehHHHHHHH
Confidence 45677777777888888888889999999999999999999999999999999999999999988 77776666666555
Q ss_pred HHHHHHHHhhh--cc-CCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhh
Q 008355 108 LGMTLLTLTAS--VS-GLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNW 184 (568)
Q Consensus 108 i~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (568)
++.+.+.+... .+ ........ .-....+.+.+++..++.|++.+...+...+++.+.+|++. ||+++|.
T Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~------~G~v~g~ 374 (1140)
T PRK06814 303 LFGLDLAFASSSVPAEPAQLKSIL--VFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAH------RARVIAA 374 (1140)
T ss_pred HHHHHHHhcccccccccccccchh--hhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCccc------ceeeeHH
Confidence 55544433200 00 00000000 00000245567777888899999999999999999999999 9999999
Q ss_pred HHHHHHHhHHHhhhhhhheec-cccchhhhhHHHH
Q 008355 185 FYLSINIGALVASSVLVWIQM-NVGWGWGFGIPAV 218 (568)
Q Consensus 185 ~~~~~~ig~~~~p~~~~~i~~-~~g~~~~f~~~~~ 218 (568)
+++..++|..+++++++.+.+ ..++...|++.++
T Consensus 375 ~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 375 NNVLNAAFMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 999999999999999988863 4456666555443
No 198
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.87 E-value=5.1e-08 Score=102.10 Aligned_cols=165 Identities=10% Similarity=-0.054 Sum_probs=121.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhh
Q 008355 39 CCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTAS 118 (568)
Q Consensus 39 ~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~ 118 (568)
.+...........++.|+++.+|.+..+.|++.+...++..++.+..+++.||. ++++.+..+.+ .++.....+..
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~-~~~~~~~~g~~-~~~~~~~~~~~-- 290 (393)
T PRK11195 215 TLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLE-TVLRVLPAGIL-MGLVVLLMALQ-- 290 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCC-cccchHHHHHH-HHHHHHHHHHH--
Confidence 333444555556677889889999999999999999999999999999999998 99988877743 33333333333
Q ss_pred ccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhh
Q 008355 119 VSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASS 198 (568)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~ 198 (568)
++.+...+..++.|++.+...+...+.+.+..|++. + +++++++.+...++|..++..
T Consensus 291 -----------------~~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~-~----~g~~~a~~~~~~~~~~~~~~~ 348 (393)
T PRK11195 291 -----------------HSLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLV-G----AGHSIAVQNFNENLAMLLMLG 348 (393)
T ss_pred -----------------hHHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccc-c----chhHHHHHhHHHHHHHHHHHH
Confidence 235555666778899998888888888877644432 1 699999999999999999999
Q ss_pred hhhheeccccchhhhhHHHHHHHHHHHHHHhc
Q 008355 199 VLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSG 230 (568)
Q Consensus 199 ~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~ 230 (568)
+.+.+ +..|-+..+.+..+..++.+.+...+
T Consensus 349 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (393)
T PRK11195 349 LYSLL-VKLGVPVVAVIVGFGLLVALAMALLW 379 (393)
T ss_pred HHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 88855 56787777777665555555444433
No 199
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.86 E-value=4.2e-09 Score=107.83 Aligned_cols=146 Identities=21% Similarity=0.216 Sum_probs=120.4
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCC-hhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQG-NVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s-~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
+.+|.++...++..+.++....++|.|+.+.+|.+ ..+.+...+...+...++.++.|+++||+ |+|+..........
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 284 (352)
T PF07690_consen 206 PVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRF-GRRRRLLIAILLLI 284 (352)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCHHHHHHHHHHHH
T ss_pred chhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHH
Confidence 34555666666666788888899999989999999 78999999999999999999999999999 99888877777666
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++...+.+.... .+....++..++.|++.+...+...+++.|.+|+++ |+++.++.+.
T Consensus 285 ~~~~~~~~~~~~----------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~------~g~~~g~~~~ 342 (352)
T PF07690_consen 285 LGALGLLLLPFS----------------SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEY------RGTAFGLFNS 342 (352)
T ss_dssp HHHHHHCCSHHH----------------CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCH------HHHHHHHHHH
T ss_pred HHHHHHHHHHHh----------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH------HHHHHHHHHH
Confidence 666655543211 234556667788899999999999999999999988 9999999999
Q ss_pred HHHHhHHHhh
Q 008355 188 SINIGALVAS 197 (568)
Q Consensus 188 ~~~ig~~~~p 197 (568)
..++|..+||
T Consensus 343 ~~~~~~~igP 352 (352)
T PF07690_consen 343 IGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHCC
Confidence 9999999987
No 200
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.85 E-value=3.8e-08 Score=102.17 Aligned_cols=148 Identities=9% Similarity=-0.074 Sum_probs=99.2
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGM 110 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 110 (568)
.+..++..++.....+....+.|.++.+.+|.+..+.+.+.+...++..++.++.|++.||+ |||+.+..+..+..+..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~~~ 274 (377)
T PRK11102 196 VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRV-GALNMLRFGLWIQFIMG 274 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHH
Confidence 44445555555556666667778888888999999999999999999999999999999999 99999988877654433
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH-H
Q 008355 111 TLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS-I 189 (568)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~-~ 189 (568)
+........+ .+.+.+.++..+.+.+.+...+.....+.|..| +. ++++.+..+.. .
T Consensus 275 ~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~~~~~~~~~ 332 (377)
T PRK11102 275 IWLVVSALLD---------------LGFWALVVGVAAFVGCVSMISSNAMAVILDEFP-HM------AGTASSLAGTLRF 332 (377)
T ss_pred HHHHHHHHHh---------------hhHHHHHHHHHHHHHHHHHhhHHHHHHHhcccc-cc------chHHHHHHHHHHH
Confidence 3222211101 123334444444444455555555566677666 45 78888875443 4
Q ss_pred HHhHHHhhhhhh
Q 008355 190 NIGALVASSVLV 201 (568)
Q Consensus 190 ~ig~~~~p~~~~ 201 (568)
.+|+.+++.+++
T Consensus 333 ~~g~~~g~~~~~ 344 (377)
T PRK11102 333 GIGAIVGALLSL 344 (377)
T ss_pred HHHHHHHHHHHh
Confidence 577777776654
No 201
>PRK09848 glucuronide transporter; Provisional
Probab=98.85 E-value=7.8e-09 Score=110.24 Aligned_cols=164 Identities=14% Similarity=0.128 Sum_probs=125.4
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.|.++...+..++....++......+.|+++.+|.+....++......++..++.++.++++||+ |+|+++.++.++..
T Consensus 227 n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~-g~~~~~~~g~~~~~ 305 (448)
T PRK09848 227 NRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARI-GKKNTFLIGALLGT 305 (448)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcHHHHHHHHHHHH
Confidence 45566677777777777777777777788888887766555555555667788899999999999 99999999998888
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhh-hhhhhhhhhHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGER-EKKSSFFNWFY 186 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~ 186 (568)
++.+++.+. +. .+.+.+++..++.|+|.+...+...++.+|..|.++...- ..+|..++.++
T Consensus 306 i~~~~~~~~---~~--------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~ 368 (448)
T PRK09848 306 CGYLLFFWV---SV--------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFS 368 (448)
T ss_pred HHHHHHHHc---Cc--------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHH
Confidence 887766654 11 3456667777888999999999999999998876541110 11588889999
Q ss_pred HHHHHhHHHhhhhhhheeccccc
Q 008355 187 LSINIGALVASSVLVWIQMNVGW 209 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g~ 209 (568)
+...+|..+|+.+.+.+.+..||
T Consensus 369 ~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 369 FTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999998887665555
No 202
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.84 E-value=1.9e-08 Score=107.78 Aligned_cols=176 Identities=16% Similarity=0.126 Sum_probs=150.2
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccC--chHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMG--RFWTIASFSIIY 106 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~G--rk~~~~~~~~~~ 106 (568)
+..+.+++...+..++++....+++.|.+ .+|++..+++.++++..+...+++++.|+++|+. . ++.+..++.++.
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~-~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~-~~~~~~~~~~~ll~~ 375 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAK-SLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKP-GIRALVLFLLTLLIA 375 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCcc-ccchHHHHHHHHHHH
Confidence 46777888888889999988899999988 7999999999999999999999999999999998 6 344555666666
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY 186 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (568)
.++.+.+++. ++.+.++..-++.|++.|...+..+..+.|+.+.++ -..++|+..
T Consensus 376 gl~~~~~p~~-------------------~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~------l~~a~Gl~l 430 (509)
T KOG2504|consen 376 GLARLFLPFA-------------------TTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEK------LSNAYGLLL 430 (509)
T ss_pred HHHHHHHHHh-------------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhh------cchHHHHHH
Confidence 6666666766 457778888889999999998888889999999988 999999999
Q ss_pred HHHHHhHHHhhhhhhheecccc-chhhhhHHHHHHHHHHHHHHhcC
Q 008355 187 LSINIGALVASSVLVWIQMNVG-WGWGFGIPAVAMAIAVVFFFSGS 231 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g-~~~~f~~~~~~~~~~~~~~~~~~ 231 (568)
+...++..+||.+.|++.+..| |...|+..++..+++....+..+
T Consensus 431 ~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 431 LFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999999999888 99999998887777765554433
No 203
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.83 E-value=5.7e-08 Score=101.34 Aligned_cols=180 Identities=13% Similarity=0.054 Sum_probs=133.5
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
|.+++.++..++...+.-....+.+.|+++.-|.+....+...+...++-.+.-...+++-.|+ |.|++++++.+..++
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~-g~~~ll~~a~~~~~v 285 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRF-GIKWLLLLALVAYAV 285 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHH
Confidence 3455666667777777777778889998864447777788777777888888889999999999 999999999988888
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH-
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL- 187 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~- 187 (568)
=..+.+.... |. .........+..+.|+..|....+...++.+..|++. |+++.+++..
T Consensus 286 R~~l~a~~~~-~~-------------~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~------~at~Q~l~~~~ 345 (400)
T PF03825_consen 286 RWLLYAYFSD-PW-------------PFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPEL------RATAQGLYSAL 345 (400)
T ss_pred HHHHHHHhcC-Cc-------------HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccc------hHHHHHHHHHH
Confidence 7777776511 10 0011223344567899999999999999999999999 9999999766
Q ss_pred HHHHhHHHhhhhhhheeccccchh------hhhHHHHHHHHHHHHHHh
Q 008355 188 SINIGALVASSVLVWIQMNVGWGW------GFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~~------~f~~~~~~~~~~~~~~~~ 229 (568)
...+|..+|..++|++.+.+|-+. .+.+.++..++..+++..
T Consensus 346 ~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~ 393 (400)
T PF03825_consen 346 SFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVI 393 (400)
T ss_pred HhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 467999999999999999877553 334444444444444333
No 204
>PRK11043 putative transporter; Provisional
Probab=98.82 E-value=7.5e-08 Score=101.05 Aligned_cols=153 Identities=10% Similarity=0.011 Sum_probs=109.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHH
Q 008355 35 LGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLT 114 (568)
Q Consensus 35 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~ 114 (568)
.+...+....++....++|.|++ +.|++..+.|.......++..++.+..+++.||+ |+|+.+....+..+++.+.+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~-~~~~~~~~~~~~~~~~~~~~~ 286 (401)
T PRK11043 209 VLIFAACSAAFFAWLTGSPFILE-QMGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW-GGEQLLPWLLVLFAVSVIAIW 286 (401)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHH
Confidence 33334445556666677888776 5899999999888888888889999999999999 999987666655555444332
Q ss_pred HhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHH
Q 008355 115 LTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGAL 194 (568)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~ 194 (568)
.....+. .+...+++...+.+++.+...|.......+..| ++ |+++.++++.....++.
T Consensus 287 ~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~g~~~g~~~~~~~~~~~ 345 (401)
T PRK11043 287 LASLLSH--------------PSLVPLLIPFCVMAAANGAIYPIVVAQALRPFP-QA------TGKAAALQNTLQLGLCF 345 (401)
T ss_pred HHHHhcc--------------CcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCc-cc------ChHHHHHHHHHHHHHHH
Confidence 2211111 234445555667788888888888777777765 45 89999999888888888
Q ss_pred Hhhhhhhheeccccch
Q 008355 195 VASSVLVWIQMNVGWG 210 (568)
Q Consensus 195 ~~p~~~~~i~~~~g~~ 210 (568)
+++.+.+.+.+.....
T Consensus 346 ~~~~~~g~l~~~~~~~ 361 (401)
T PRK11043 346 LASLLVSALISTPLLT 361 (401)
T ss_pred HHHHHHHHccCCChhH
Confidence 8888888887644333
No 205
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.80 E-value=3.8e-08 Score=101.45 Aligned_cols=144 Identities=12% Similarity=0.015 Sum_probs=111.9
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHH-HHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWS-GTCYITPLIGAFLADSYMGRFWTIASFSIIYCLG 109 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~-~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 109 (568)
++.+++..++.++.++....+++.|+++ +|++..+.+.+..+.. +...++.+++|+++||+ |||+.+..+.++..++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~-g~~~~l~~~~~~~~~~ 288 (356)
T TIGR00901 211 ALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPL-NILYALLLFGIVQALT 288 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHH
Confidence 5666666777788888999999999987 9999999998887765 56779999999999999 9999998888877776
Q ss_pred HHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHH
Q 008355 110 MTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSI 189 (568)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 189 (568)
..+..+..+... +.+...++.+.++...++.+++.+...+...+++.|.+|+++ |++.+++++...
T Consensus 289 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~------~g~~~g~~~~~~ 354 (356)
T TIGR00901 289 NAGFVWLASNGH--------HDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKF------GATQMALLSSLS 354 (356)
T ss_pred HHHHHHHHhcCc--------ccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCc------cHHHHHHHHHHH
Confidence 665544311000 000000234567777788899999999999999999999999 999999987765
Q ss_pred H
Q 008355 190 N 190 (568)
Q Consensus 190 ~ 190 (568)
+
T Consensus 355 ~ 355 (356)
T TIGR00901 355 A 355 (356)
T ss_pred h
Confidence 5
No 206
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.79 E-value=7e-08 Score=100.92 Aligned_cols=73 Identities=8% Similarity=0.024 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHh
Q 008355 43 LAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLT 116 (568)
Q Consensus 43 ~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~ 116 (568)
........+.|.|+++++|++..+.+.......++..++.++.|++.||+ |||+.+.++..+..++...+.+.
T Consensus 217 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~-g~~~~~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 217 TVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIF-KPRTLMLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344555667788888999999999999999999999999999999999 99999999988888777776665
No 207
>TIGR00898 2A0119 cation transport protein.
Probab=98.78 E-value=2.5e-08 Score=108.09 Aligned_cols=133 Identities=12% Similarity=0.037 Sum_probs=98.5
Q ss_pred HHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHh
Q 008355 71 VTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIAL 150 (568)
Q Consensus 71 ~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 150 (568)
.....+...++.++.++++||+ |||+.+.++.++.+++.+++.+. +. ...+..++..++.++
T Consensus 361 ~~~~~~~~i~~~~~~~~l~dr~-grr~~~~~~~~~~~~~~l~~~~~---~~--------------~~~~~~~~~~~~~~~ 422 (505)
T TIGR00898 361 LFISGLVELPAKLITLLLIDRL-GRRYTMAASLLLAGVALLLLLFV---PV--------------DLYFLRTALAVLGKF 422 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHc---CC--------------CchHHHHHHHHHHHH
Confidence 3445666778889999999999 99999999988888877766654 11 112334444455566
Q ss_pred hcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHh
Q 008355 151 GTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 151 g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~ 229 (568)
+.+...+....+.+|.+|++. |++++++.+....+|+.++|.+.+ + ...++..++++.+...+++.++..+
T Consensus 423 ~~~~~~~~~~~~~~e~~p~~~------r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (505)
T TIGR00898 423 GITSAFQMVYLYTAELYPTVV------RNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLF 493 (505)
T ss_pred HHHHHHHHHHHHhcccccHHH------HhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHc
Confidence 666677788899999999988 999999999999999999999888 3 3456666776666555555444433
No 208
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.77 E-value=2e-07 Score=92.36 Aligned_cols=166 Identities=16% Similarity=0.085 Sum_probs=133.0
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
+..|.+.+---+.++.+|.+..|+|.++. +.|+|..+.|+..+...+.+....+..-++++|...+|+......+.+.+
T Consensus 208 ~~aW~vtLfmGlqS~~~Y~~~~WLP~ili-~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~ 286 (395)
T COG2807 208 PLAWQVTLFMGLQSLLYYIVIGWLPAILI-DRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLV 286 (395)
T ss_pred chhHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHH
Confidence 44677777788899999999999999887 58999999999999999999999999999999886788888888888888
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
|.+-+.+. |. +. .+...+++|+|.|+.+|....++.+..+..+. -++..++-+-.
T Consensus 287 G~~G~~~~---P~---------------~~--~~lw~~llG~G~G~~F~laL~li~~rs~~a~~-----Aa~LSgmaQg~ 341 (395)
T COG2807 287 GLVGLLLA---PG---------------QL--PILWALLLGLGQGGAFPLALTLILLRSSDAAI-----AAALSGMAQGV 341 (395)
T ss_pred HHHHHHHh---hh---------------hH--HHHHHHHHhCccchHHHHHHHHHHhhcCChHH-----HHHHHHHhhhh
Confidence 88777665 32 11 22224789999999999999999988765441 56667777777
Q ss_pred HHHhHHHhhhhhhheecccc-chhhhhHHHHHH
Q 008355 189 INIGALVASSVLVWIQMNVG-WGWGFGIPAVAM 220 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g-~~~~f~~~~~~~ 220 (568)
..+=+..||.+.|++.|..| |+.+...-+...
T Consensus 342 GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~ 374 (395)
T COG2807 342 GYLLAAFGPWLFGFLHDATGSWSAPLVLLALAT 374 (395)
T ss_pred hHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHH
Confidence 77778889999999998765 887765544433
No 209
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.76 E-value=1.1e-07 Score=93.78 Aligned_cols=146 Identities=16% Similarity=0.130 Sum_probs=106.6
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHH-----------------h--CCChhhhhhhHHHHHHHHHhhhhhHHHHh
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQ-----------------L--NQGNVTASNNVTNWSGTCYITPLIGAFLA 89 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-----------------l--g~s~~~~g~~~~~~~~~~~i~~~~~G~la 89 (568)
|..+.+....+.+.+.||+++-......+.. . ..+...--.=..+.+++..-+.++.|++.
T Consensus 326 kttlllw~iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iv 405 (528)
T KOG0253|consen 326 KTTLLLWRIWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIV 405 (528)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHH
Confidence 4457777888999999999876544333221 1 11111222223456778888999999999
Q ss_pred hhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCC
Q 008355 90 DSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDE 169 (568)
Q Consensus 90 Dr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 169 (568)
||+ |||+.+....+++++..+++....+ + ......++.+|++...+ +.+++.|..|.+|.
T Consensus 406 erl-GRKkTMal~l~~f~iflfll~~c~~-r--------------n~~tvllf~arafisg~----fqvaYvYtPEVyPT 465 (528)
T KOG0253|consen 406 ERL-GRKKTMALSLILFGIFLFLLTTCKT-R--------------NAYTVLLFTARAFISGA----FQVAYVYTPEVYPT 465 (528)
T ss_pred HHh-cchhHHHHHHHHHHHHHHHHHHhcC-c--------------chhHHHHHHHHHHHhch----heEEEEecCcccch
Confidence 998 9999999999999988887765521 1 01234466667665443 34788999999999
Q ss_pred CCchhhhhhhhhhhhHHHHHHHhHHHhhhhh
Q 008355 170 TDDGEREKKSSFFNWFYLSINIGALVASSVL 200 (568)
Q Consensus 170 ~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~ 200 (568)
.. |+++.|.-.....+|+++.|.+.
T Consensus 466 av------RatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 466 AV------RATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred hh------hhcchhhhhhHHhhhhhhhhHHH
Confidence 99 99999999999999999999988
No 210
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.74 E-value=4.3e-08 Score=103.71 Aligned_cols=176 Identities=14% Similarity=0.045 Sum_probs=120.7
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccC-------chHHH-H
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMG-------RFWTI-A 100 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~G-------rk~~~-~ 100 (568)
+.+|.+.+..++.+.+++.+..++|.|+.+.+|++..+.|+..++..+...+..+++|.++||... +||.+ .
T Consensus 258 ~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~ 337 (466)
T KOG2532|consen 258 PPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNT 337 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHh
Confidence 468999999999999999999999999999999999999999999999999999999999999933 11222 1
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhh
Q 008355 101 SFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSS 180 (568)
Q Consensus 101 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 180 (568)
++....+++.+.+++. +. ++.......+.++..+.|+..++..-+ ..|.. ++. -+.
T Consensus 338 i~~~~~ai~l~~l~~~---~~----------~~~~~a~~~l~~~~~~~g~~~~Gf~~~----~~~~a-pq~------a~~ 393 (466)
T KOG2532|consen 338 IAFGGPAVFLLVLAFT---SD----------EHRLLAVILLTIAIGLSGFNISGFYKN----HQDIA-PQH------AGF 393 (466)
T ss_pred HHHHHHHHHHHeeeec---CC----------CcchHHHHHHHHHHHHcccchhhhHhh----hhhcc-chH------HHH
Confidence 2222333333333333 11 000011222222222233333332211 11222 333 688
Q ss_pred hhhhHHHHHHHhHHHhhhhhhheecc---ccchhhhhHHHHHHHHHHHHHH
Q 008355 181 FFNWFYLSINIGALVASSVLVWIQMN---VGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 181 ~~~~~~~~~~ig~~~~p~~~~~i~~~---~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
.+++.+...++.+.++|.+.+.+... ..|+..|++.++..++..+.+.
T Consensus 394 l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~ 444 (466)
T KOG2532|consen 394 VMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFL 444 (466)
T ss_pred HHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchhee
Confidence 89999999999999999999999842 3699999999887777765443
No 211
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.70 E-value=9.7e-08 Score=98.63 Aligned_cols=142 Identities=13% Similarity=0.087 Sum_probs=106.2
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
+..+.+.+..++....++.+..+++.|+++.+|.+..+.+.......+...++.+++|+++||+ |||+.+..+....+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~-g~~~~~~~~~~~~~~ 303 (366)
T TIGR00886 225 RHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRL-GGARKLLMSFLGVAM 303 (366)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhh-ccchhHHHHHHHHHH
Confidence 3456666666666677778888999999999999999999999999999999999999999999 999888877766666
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
+..++.+... . ..+...+.+...+.+++.|...+...+++++.+| ++ ++++.|+.+..
T Consensus 304 ~~~~~~~~~~--~-------------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~------~g~~~g~~~~~ 361 (366)
T TIGR00886 304 GAFLVVLGLV--S-------------PLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFR-RA------TGAVSGLVGAI 361 (366)
T ss_pred HHHHHHhcCC--C-------------cchHHHHHHHHHHHHHHhccccchhhhcchhhch-hh------cccHHHHHHHh
Confidence 5555544311 0 0134445555555666666666677788888877 35 89999998888
Q ss_pred HHHhH
Q 008355 189 INIGA 193 (568)
Q Consensus 189 ~~ig~ 193 (568)
.++|+
T Consensus 362 ~~~g~ 366 (366)
T TIGR00886 362 GNLGG 366 (366)
T ss_pred ccCCC
Confidence 77763
No 212
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.66 E-value=5.9e-08 Score=104.23 Aligned_cols=166 Identities=15% Similarity=0.063 Sum_probs=119.2
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.|.++.+++..++.+...+......+.|.+..++ +....+.+.+...+...++.++.++++||+ |+|++++++.++.+
T Consensus 230 n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gkk~~~~~~~~~~~ 307 (473)
T PRK10429 230 NDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSL-SRRILWAGASIFPV 307 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CcHHHHHHHHHHHH
Confidence 3666777777777777777666666655554444 455566777767788889999999999999 99999998887766
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchh-hhhhhhhhhhHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGE-REKKSSFFNWFY 186 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~ 186 (568)
++.+........+. .+.+.+++.-++.|++.+...+...++++|..|.++... +.+.|..++...
T Consensus 308 ~~~~~~~~~~~~~~--------------~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~ 373 (473)
T PRK10429 308 LSCGVLLLMGLAAP--------------HNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQT 373 (473)
T ss_pred HHHHHHHHHhccCc--------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHH
Confidence 66555433210111 345566667778889999999999999999977443110 001455788899
Q ss_pred HHHHHhHHHhhhhhhheeccccc
Q 008355 187 LSINIGALVASSVLVWIQMNVGW 209 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g~ 209 (568)
+...+|..+++.+.|++.+..|+
T Consensus 374 ~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 374 MVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999988776665
No 213
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.65 E-value=2.6e-07 Score=97.29 Aligned_cols=163 Identities=13% Similarity=0.051 Sum_probs=116.9
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHH-hCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQ-LNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
..+..++..++......+..++++.|+++. .+.+....+...+.+..+..++++++|++.||+ ++|+++.++.+..++
T Consensus 233 ~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~-~~~~~l~i~~~~~~~ 311 (410)
T TIGR00885 233 HYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYL-AAHKVLMAYAIIGMA 311 (410)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CHHHHHHHHHHHHHH
Confidence 345555556665555556778899998653 244445556566777788899999999999999 999999888887777
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
..++.... .+.. .....++.|+..+.++|+..+...+..+++. +..+ +...++
T Consensus 312 ~~ll~~~~-------------------~~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~------~~~s-~~l~~~ 364 (410)
T TIGR00885 312 LCLGSIFA-------------------GGHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDT------KYGA-AGLVMA 364 (410)
T ss_pred HHHHHHHc-------------------CChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh------hhhH-HHHHHH
Confidence 77666654 1222 2455667788888889999999999988654 3223 333333
Q ss_pred HHHhHHHhhhhhhheeccc------cchhhhhHHHHHHH
Q 008355 189 INIGALVASSVLVWIQMNV------GWGWGFGIPAVAMA 221 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~------g~~~~f~~~~~~~~ 221 (568)
. +|+.+.|.+.|++.|.. +.+..|+++.++.+
T Consensus 365 ~-~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 365 I-IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred H-hccchHHHHHHHHHHHhcccccCccchHHHHHHHHHH
Confidence 3 99999999999999854 47788887665443
No 214
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.65 E-value=4.2e-06 Score=86.86 Aligned_cols=136 Identities=14% Similarity=0.196 Sum_probs=100.6
Q ss_pred ccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehh
Q 008355 374 SLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIF 453 (568)
Q Consensus 374 ~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (568)
...+-..-+++-++..+ +.+|. +..+.+..|+.+..+-++.+..+. ++|
T Consensus 412 ~a~~~~gEI~~~ffs~k----lI~ki-------GHv~v~~lgLa~~~~Rf~~~S~L~--------------------n~W 460 (618)
T KOG3762|consen 412 SALCHAGEILFYFFSFK----LIEKI-------GHVNVMYLGLACNVGRFLYYSYLQ--------------------NPW 460 (618)
T ss_pred hhhhccchHHHHHHHHH----HHHHh-------cccceeeehhhHHHHHHHHHHHhc--------------------Cch
Confidence 33344444455555444 45553 334567788888888888777665 778
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccch
Q 008355 454 WQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSL-TTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGH 532 (568)
Q Consensus 454 ~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~-~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 532 (568)
.+++.=++.++-.+.+..+.-+|+...+|+++|.+++|+.. ..-++|-.+|++++|.+.+.. +
T Consensus 461 ~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~f----------------g 524 (618)
T KOG3762|consen 461 MVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERF----------------G 524 (618)
T ss_pred heeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheee----------------h
Confidence 88888899999999999999999999999999999999988 557899999999999876543 2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhh
Q 008355 533 LDYFYWLLTILSVLNFLVYLWIAK 556 (568)
Q Consensus 533 ~~~~f~~~a~~~~v~~v~~~~~~~ 556 (568)
....|.++++.|++.+++...+-+
T Consensus 525 ~~ttf~~~giAcl~~l~~~~~iq~ 548 (618)
T KOG3762|consen 525 ARTTFRIFGIACLVTLALFISIQL 548 (618)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhh
Confidence 235677777777777666555443
No 215
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.64 E-value=8.8e-08 Score=98.60 Aligned_cols=178 Identities=12% Similarity=0.069 Sum_probs=141.9
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhC---CChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLN---QGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSI 104 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg---~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~ 104 (568)
.|++|.+.+........|+..-.-.+.|.+..++ .++...|...+...+.-.+...+..++-+|+ |.|+.++++..
T Consensus 219 ~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~ri-g~k~~Lllag~ 297 (412)
T PF01306_consen 219 MRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRI-GAKNLLLLAGV 297 (412)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhc-ChHhHHHHHHH
Confidence 3556776666666666666665567788775443 3456688899999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhh
Q 008355 105 IYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNW 184 (568)
Q Consensus 105 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (568)
+.++=...++++ ++++.+.+.+.+.++-.+....+..-++++.+|++. ..+...+
T Consensus 298 i~~iRi~~~~~~-------------------~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rl------sAt~y~v 352 (412)
T PF01306_consen 298 IMAIRIIGSGFA-------------------TNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRL------SATLYLV 352 (412)
T ss_dssp HHHHHHHHHHT---------------------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGG------HHHHHHH
T ss_pred HHHHHHHHHhhh-------------------cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhH------HHHHHHH
Confidence 988888888887 568889999999999999998999999999999887 7778877
Q ss_pred -HHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcC
Q 008355 185 -FYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGS 231 (568)
Q Consensus 185 -~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 231 (568)
++.+..+|..+.+.++|.+.|+.|++..|++.+.++++..+...+..
T Consensus 353 ~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 353 GFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeee
Confidence 67888999999999999999999999999887766655554444433
No 216
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.64 E-value=1.7e-07 Score=98.34 Aligned_cols=188 Identities=13% Similarity=0.120 Sum_probs=127.9
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
+.+++.+...+..+++-.-...+-...+-++.|++..++.+++....+...+..+.+.++.||+ |||+.++++...+.+
T Consensus 269 ~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~-gRRpLll~~~~~~~~ 347 (485)
T KOG0569|consen 269 RPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRL-GRRPLLLISLSLMAV 347 (485)
T ss_pred HHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcHHHHHHHHHHHH
Confidence 3455555555555554433333444455567899999999999999999999999999999999 999999999998888
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhH-HHHHHHHHHHhhcc-cCcccccccccccCCCCCchhhhhhhhhhhhHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTA-VTFVALYLIALGTG-GIKPCVSSFGADQFDETDDGEREKKSSFFNWFY 186 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~g~g~g-~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (568)
..+++.....+... ...... ..+++.++..+..+ +..|..+-+.+|.+|+.. |..++++-.
T Consensus 348 ~~~~~~~~~~l~~~-----------~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~------R~aa~s~~~ 410 (485)
T KOG0569|consen 348 ALLLMSIALFLSNS-----------FGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSA------RSAAQSVAT 410 (485)
T ss_pred HHHHHHHHHHHHHH-----------hhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccc------hHHHHHHHH
Confidence 88777655322210 000011 12233333222222 224778889999999998 999999988
Q ss_pred HHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCceee
Q 008355 187 LSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRLYR 235 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 235 (568)
....+...+-......+.+.+|- +.|++.++..++..+..+...|+.|
T Consensus 411 ~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 411 AVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 88888888777777777777775 5566556555555555555555443
No 217
>PRK09669 putative symporter YagG; Provisional
Probab=98.61 E-value=1.5e-07 Score=100.25 Aligned_cols=163 Identities=13% Similarity=0.095 Sum_probs=109.2
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
|..+.++...++............+.|.+..++ +....+.+.....+...++.++.++++||+ |+|+.+..+.+..++
T Consensus 229 ~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~-gk~~~~~~~~~~~~~ 306 (444)
T PRK09669 229 SQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKF-DRVRAFKWTIVAFVI 306 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHHH
Confidence 344555555555544443333333333333333 223334555566677778889999999999 999999988766554
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhh-hhhhhhhhhHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGER-EKKSSFFNWFYL 187 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~ 187 (568)
......+. +. .+.+.+++..++.|++.+...+..+++++|..|.++.+.. ...|..++.+.+
T Consensus 307 ~~~~~~~~---~~--------------~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~ 369 (444)
T PRK09669 307 LSALIFFI---PP--------------SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLF 369 (444)
T ss_pred HHHHHHHh---Cc--------------chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHH
Confidence 43332222 11 3566677777889999999999999999999874432111 124667788999
Q ss_pred HHHHhHHHhhhhhhheeccccch
Q 008355 188 SINIGALVASSVLVWIQMNVGWG 210 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~ 210 (568)
...+|..+|+.++|.+.+..|+.
T Consensus 370 ~~klg~alg~~i~g~ll~~~Gy~ 392 (444)
T PRK09669 370 AIKLGLAIGGAVVGWILAWVDYV 392 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999888777763
No 218
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.60 E-value=3.3e-05 Score=80.63 Aligned_cols=104 Identities=8% Similarity=0.073 Sum_probs=84.3
Q ss_pred HHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHh
Q 008355 71 VTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIAL 150 (568)
Q Consensus 71 ~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 150 (568)
+++......+..++++.+.|++ |.|..+.++...+......+-. .|.+.++..-.+.|+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i-~~K~~lv~ga~~y~~f~~gfl~--------------------~N~y~~yfssallG~ 114 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFL-GPKWALVIGATCYAAFPLGFLF--------------------PNSYYLYFSSALLGF 114 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHh-hHHHHHHHHhHHHHHHHHHHHh--------------------cchHHHHHHHHHhhh
Confidence 6677788889999999999999 9999999998776665555444 357778999999999
Q ss_pred hcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhh
Q 008355 151 GTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLV 201 (568)
Q Consensus 151 g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~ 201 (568)
|.+..+.....++++..+++. +.+-.++.....+.+.++|..+..
T Consensus 115 Gaallw~GqG~ylt~~st~~t------ie~Nisi~Wai~~~~li~Ggi~l~ 159 (461)
T KOG3098|consen 115 GAALLWTGQGGYLTSNSTRET------IERNISIFWAIGQSSLIIGGIILF 159 (461)
T ss_pred hHHheecccceehhhcCChhh------HHHHHHHHHHHHHHHHHhhhHhhe
Confidence 999999999999999988877 777777776677777777655443
No 219
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.56 E-value=1.7e-06 Score=75.35 Aligned_cols=131 Identities=18% Similarity=0.387 Sum_probs=92.3
Q ss_pred hhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHH
Q 008355 379 LSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQ 458 (568)
Q Consensus 379 ~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 458 (568)
+..++..++.++ +.||. ++++.+..+..+..++.+...... +.+.....
T Consensus 9 ~~~~~~~~~~g~----~~d~~-------g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~ 57 (141)
T TIGR00880 9 LGQLIYSPLSGL----LTDRF-------GRKPVLLVGLFIFVLSTAMFALSS--------------------NITVLIIA 57 (141)
T ss_pred hHHHHHHhhHHH----HHhhc-------chhHHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHH
Confidence 444555555555 44443 333456667666666665554332 45556666
Q ss_pred HHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHH
Q 008355 459 YFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYW 538 (568)
Q Consensus 459 ~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~ 538 (568)
..+.+++.....+..+.++.|..|++.|+++.++.++...+|..+++.+.+.+.+.. +| +..|+
T Consensus 58 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------~~----------~~~~~ 121 (141)
T TIGR00880 58 RFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL------GW----------RAPFL 121 (141)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc------ch----------HHHHH
Confidence 788889988889999999999999999999999999999999999999998875422 22 34566
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 008355 539 LLTILSVLNFLVYLWIAK 556 (568)
Q Consensus 539 ~~a~~~~v~~v~~~~~~~ 556 (568)
+.+.++++..+..++..|
T Consensus 122 ~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 122 FLAILALAAFILLAFLLP 139 (141)
T ss_pred HHHHHHHHHHHHHhhcCC
Confidence 767777777666555444
No 220
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.55 E-value=1.9e-06 Score=90.09 Aligned_cols=144 Identities=12% Similarity=-0.007 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 008355 44 AYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLK 123 (568)
Q Consensus 44 ~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~ 123 (568)
.........+.|+++.+|.+..+.++......++..++.++.+++.||+ +++... +.....++.+..........
T Consensus 222 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~-- 296 (394)
T PRK11652 222 GIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRF-STLMWQ--SVICCLLAGLLMWIPGWFGV-- 296 (394)
T ss_pred HHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHHHHHhcc--
Confidence 3333445567788888999999999988888888888999999999998 743322 22222222222111100000
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhhe
Q 008355 124 PSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWI 203 (568)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i 203 (568)
.+.+.++.+.++.++|.+...|...++..|.+|+ + ++++.++.+...++|..+++.+++.+
T Consensus 297 ------------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~------~g~~~~~~~~~~~lg~~~~~~~~~~~ 357 (394)
T PRK11652 297 ------------MNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPY-L------AGTAGALLGGLQNIGSGLAALLSAML 357 (394)
T ss_pred ------------ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc-c------chHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 2355567777888999999999999999888873 4 78899999999999999999999988
Q ss_pred eccccchh
Q 008355 204 QMNVGWGW 211 (568)
Q Consensus 204 ~~~~g~~~ 211 (568)
.....+..
T Consensus 358 ~~~~~~~~ 365 (394)
T PRK11652 358 PQTGQFSL 365 (394)
T ss_pred cCCchHHH
Confidence 76544443
No 221
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.54 E-value=4.8e-07 Score=94.20 Aligned_cols=165 Identities=17% Similarity=0.176 Sum_probs=130.7
Q ss_pred CcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHH
Q 008355 27 NWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIY 106 (568)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~ 106 (568)
+.|..+.+++..++...++....+....|.+..+|.+..+..+.+.....+..++.++..++++|+ |+|+++..+.++.
T Consensus 234 ~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~-gkk~~~~~~~~~~ 312 (467)
T COG2211 234 KNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKF-GKKKLFLIGLLLL 312 (467)
T ss_pred ccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHh-chHHHHHHHHHHH
Confidence 345566666667777777766667777787878888888888888888888888899999999999 9999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhh-hhhhhhhH
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREK-KSSFFNWF 185 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~ 185 (568)
+++.++..+. |. ++.+.+++..++.++|.+...+..+++++|..+-+|-....+ -|..++.+
T Consensus 313 ~i~~~~~~f~---~~--------------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~ 375 (467)
T COG2211 313 AVGYLLLYFT---PA--------------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGM 375 (467)
T ss_pred HHHHHHHHhh---cC--------------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHH
Confidence 9999998887 22 568888888899999999999999999999987555322222 25556778
Q ss_pred HHHHHHhHHHhhhhhhheeccccc
Q 008355 186 YLSINIGALVASSVLVWIQMNVGW 209 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~~~g~ 209 (568)
....-+|..++..+.|++....|+
T Consensus 376 tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 376 TFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 888888888888777777665554
No 222
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.52 E-value=1.6e-07 Score=93.85 Aligned_cols=178 Identities=11% Similarity=0.047 Sum_probs=135.8
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccC--chHHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMG--RFWTIASFSIIYCL 108 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~G--rk~~~~~~~~~~~i 108 (568)
++...+.-...+.+.-..-+.++.++.+++..+..+.|....-..+.+.++..+.|.++||+ + |-.....+++...+
T Consensus 272 I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~-~~~~wl~~~~gl~~~G~ 350 (464)
T KOG3764|consen 272 ILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKY-PHLRWLLSLGGLATVGV 350 (464)
T ss_pred HhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhc-CchhHHHHHHHHHHHHH
Confidence 45555555555555556678889999999997777999999999999999999999999999 9 43333444444444
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
.+....++ +++..+++-+...+++.+...++..+......+.++..+-..-|...++...+
T Consensus 351 ~~~~iP~~-------------------~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a 411 (464)
T KOG3764|consen 351 SSGPIPFA-------------------TSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAA 411 (464)
T ss_pred HhchhHhh-------------------hhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHH
Confidence 44444555 45777888888899999998888888888888766644333478889999999
Q ss_pred HHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHH
Q 008355 189 INIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~ 228 (568)
..+|..+||.++|.+.+..|++|.-.+.++..++-..++.
T Consensus 412 ~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ 451 (464)
T KOG3764|consen 412 FSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLL 451 (464)
T ss_pred HHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987776665555444433
No 223
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.47 E-value=1.2e-06 Score=92.28 Aligned_cols=170 Identities=15% Similarity=0.050 Sum_probs=112.5
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCL 108 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i 108 (568)
|.++...+..++....++....+.|.|+++.+|.+..+.++.......+..++..+.+++.++. ++++.+.....+..+
T Consensus 218 ~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~-~~~~~~~~~~~~~~i 296 (413)
T PRK15403 218 RLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDP-TEPRFIWRAVPIQLV 296 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccC-CchhHHHHHHHHHHH
Confidence 4566666667777777788888889999998999999999988778888888888888776555 454544433344444
Q ss_pred HHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 109 GMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
+..++........ .+....+++.++.++|.+...|...+.. +.+.+.+ +|++.++++..
T Consensus 297 g~~l~~~~~~~~~--------------~~~~~~~~~~~l~~~G~~~~~p~~~~~a--l~~~~~~-----~G~a~a~~~~~ 355 (413)
T PRK15403 297 GLALLIVGNLLWP--------------HVWLWSVLGTSLYAFGIGLIFPTLFRFT--LFSNNLP-----KGTVSASLNMV 355 (413)
T ss_pred HHHHHHHHHHHcc--------------ccHHHHHHHHHHHHHHHHHHhHHHHHHH--hccCCCC-----CcHHHHHHHHH
Confidence 4444433210000 2333456777888889888877777432 2322221 78888888888
Q ss_pred HHHhHHHhhhhhhheeccccchhhhhHHHHHHH
Q 008355 189 INIGALVASSVLVWIQMNVGWGWGFGIPAVAMA 221 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~ 221 (568)
...+...++.+.+++... +-.++|....+...
T Consensus 356 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~ 387 (413)
T PRK15403 356 ILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAG 387 (413)
T ss_pred HHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHH
Confidence 888888888888877654 55666655554433
No 224
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.47 E-value=5.3e-08 Score=99.20 Aligned_cols=143 Identities=17% Similarity=0.231 Sum_probs=115.0
Q ss_pred hhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceee
Q 008355 372 SLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMT 451 (568)
Q Consensus 372 ~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (568)
.++....+..+++.|+.++ +++| .++.+.+.+|..+.+++.+..+... .
T Consensus 72 ll~~vf~v~~~i~sPl~gy----Ladr-------yNR~~v~~vG~~iW~~Av~~~~fs~--------------------~ 120 (493)
T KOG1330|consen 72 LLQTVFIVVFMIASPLFGY----LADR-------YNRKRVIAVGIFIWTLAVFASGFSN--------------------H 120 (493)
T ss_pred chhHHHHHHHHHHHHHHHH----HHhh-------cCcceEEeeHHHHHHHHHHHHHHHH--------------------H
Confidence 3455555667778888887 5666 3445688999999999988887664 6
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccc
Q 008355 452 IFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRG 531 (568)
Q Consensus 452 ~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~ 531 (568)
+|.+.+.=.+.|+||....|....+++|.+|++.|+...+++++...+|..+|-+.+..+.+.+. .|
T Consensus 121 Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~-----~W-------- 187 (493)
T KOG1330|consen 121 FWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF-----WW-------- 187 (493)
T ss_pred HHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc-----ce--------
Confidence 77788888999999999999999999999999999999999999999999998777777655442 24
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhcee
Q 008355 532 HLDYFYWLLTILSVLNFLVYLWIAKWFTY 560 (568)
Q Consensus 532 ~~~~~f~~~a~~~~v~~v~~~~~~~~~~~ 560 (568)
++.|+..++++++..++..++.++-.+
T Consensus 188 --r~af~~~avl~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 188 --RWAFRGSAVLGVIVGLLVFLFVREPER 214 (493)
T ss_pred --EEEEEeehHHHHHHHHHHHhhccCccc
Confidence 456888899999988888777776544
No 225
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.46 E-value=2.8e-06 Score=81.96 Aligned_cols=166 Identities=12% Similarity=0.096 Sum_probs=115.7
Q ss_pred HHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCC
Q 008355 44 AYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLK 123 (568)
Q Consensus 44 ~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~ 123 (568)
..|.+..+ .+.+++.+|+|..+...+..+..++..+ .++.|.+.|++ |++.++.+|.+...+|..++.++-+-..
T Consensus 17 t~Y~Fs~y-S~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~-gp~~~l~iG~~~~~~GY~~~~l~~~~~i-- 91 (250)
T PF06813_consen 17 TTYTFSAY-SPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRF-GPWVVLLIGAVLGFVGYGLLWLAVSGRI-- 91 (250)
T ss_pred cccchhhh-hHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcc--
Confidence 44544433 4468889999999999999888888876 58889999999 9999999999999999998877622110
Q ss_pred CCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhhe
Q 008355 124 PSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWI 203 (568)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i 203 (568)
.....+.+.+...+.+.+.+....++.....+.||. + ||++.|+.-....+++.+-..+...+
T Consensus 92 ----------~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~------RG~vvgilk~~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 92 ----------PSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S------RGTVVGILKGFFGLSAAIFTQIYSAF 154 (250)
T ss_pred ----------CccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c------cCceehhhhHHHHhHHHHHHHHHHHH
Confidence 124567777777777777777666666666788985 5 99999998777777776655555444
Q ss_pred eccccchhhhhHHHHHHHHHHHHHHhcC
Q 008355 204 QMNVGWGWGFGIPAVAMAIAVVFFFSGS 231 (568)
Q Consensus 204 ~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 231 (568)
.+.-.-...+++.....++.++..++.+
T Consensus 155 f~~~~~~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 155 FGDDPSSFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred cCCChHHHHHHHHHHHHHHHHHHhhhee
Confidence 4432233333444444444444444444
No 226
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.40 E-value=1.9e-06 Score=92.56 Aligned_cols=184 Identities=10% Similarity=-0.002 Sum_probs=129.1
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhh----hhhhHHHHHHHHHhhhhhHH----HHhhhccCchHHH--H
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVT----ASNNVTNWSGTCYITPLIGA----FLADSYMGRFWTI--A 100 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~----~g~~~~~~~~~~~i~~~~~G----~laDr~~Grk~~~--~ 100 (568)
+..+++...+....+.-..+.++.|.++..+.+... .+++.+.-.+...+..++.. ++.||-.+.+... .
T Consensus 274 ~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~ 353 (475)
T TIGR00924 274 YIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFT 353 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 445555566667777777777888887765544222 55666666666666666654 4455421333333 6
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhh
Q 008355 101 SFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSS 180 (568)
Q Consensus 101 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 180 (568)
+|.++.+++...+++...... +....+.+.+++..++.++|.....|...+++++..|++. |++
T Consensus 354 ~G~~l~~~~~~~~~~~~~~~~----------~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~------~g~ 417 (475)
T TIGR00924 354 LGMLFCGASFLTFAASIWFAD----------AGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRL------MGQ 417 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhcC----------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHH------HHH
Confidence 778888888777765311100 0112578889999999999999999999999999999998 999
Q ss_pred hhhhHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhc
Q 008355 181 FFNWFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSG 230 (568)
Q Consensus 181 ~~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~ 230 (568)
.+|++.....+|..+++.+.....+..+|...|...++..++..++++..
T Consensus 418 ~~g~~~l~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (475)
T TIGR00924 418 MLGMWFLAQAMGSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALM 467 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988877666678877776665555554444443
No 227
>PRK11462 putative transporter; Provisional
Probab=98.38 E-value=5.4e-06 Score=88.65 Aligned_cols=163 Identities=12% Similarity=0.077 Sum_probs=99.8
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.|..+.++...++..+...........|.+..+|. ....+.+...+.+...++.+++++++||+ |+|+++..+....+
T Consensus 227 Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~-gkk~~~~~~~~~~~ 304 (460)
T PRK11462 227 NDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWK-CKVTIFWWTNALLA 304 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ChHHHHHHHHHHHH
Confidence 33444444444455554444444444444444553 33445667778888889999999999999 99988775554444
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhh-hhhhhhhHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREK-KSSFFNWFY 186 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~-r~~~~~~~~ 186 (568)
+...+..+. |. .+...+++..++.|++.+...+...++++|..+.+|-....+ .+..++...
T Consensus 305 ~~~~~~~~~---~~--------------~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~ 367 (460)
T PRK11462 305 VISLAMFFV---PM--------------QASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTL 367 (460)
T ss_pred HHHHHHHHh---ch--------------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHH
Confidence 333333222 11 223334445566788877777777888888877432111111 244457777
Q ss_pred HHHHHhHHHhhhhhhheeccccc
Q 008355 187 LSINIGALVASSVLVWIQMNVGW 209 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g~ 209 (568)
+...+|..+++.++|++.+..||
T Consensus 368 f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 368 FVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC
Confidence 88899999999888877665555
No 228
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.32 E-value=1.7e-06 Score=89.77 Aligned_cols=174 Identities=10% Similarity=-0.043 Sum_probs=140.3
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGM 110 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 110 (568)
+.+.++..++..+..-.+.+++--+++ +++......|.+...--.+-.+.-++.+++..|+ |+-+++..++..+.+=.
T Consensus 373 ~llff~~av~mG~g~~lv~tFLfWHle-d~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~ki-GHv~v~~lgLa~~~~Rf 450 (618)
T KOG3762|consen 373 ILLFFFVAVVMGAGVGLVFTFLFWHLE-DLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKI-GHVNVMYLGLACNVGRF 450 (618)
T ss_pred EEehhHHHHHHHHHHHHHHHHHHHHHh-hcCCcceeeeehhhhhccchHHHHHHHHHHHHHh-cccceeeehhhHHHHHH
Confidence 344556666666666666666655554 6776777777555556667778888999999999 99999999998888887
Q ss_pred HHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH-HHH
Q 008355 111 TLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY-LSI 189 (568)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~-~~~ 189 (568)
+..... .|+|..+..-+++|+..+.++.++.+++++..|++- |.++.++.+ ...
T Consensus 451 ~~~S~L-------------------~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l------~at~Q~l~~g~f~ 505 (618)
T KOG3762|consen 451 LYYSYL-------------------QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGL------RATAQGLLQGIFH 505 (618)
T ss_pred HHHHHh-------------------cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcc------hHHHHHHHHHHhc
Confidence 777776 678889999999999999999999999999999998 999999854 455
Q ss_pred HHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcC
Q 008355 190 NIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGS 231 (568)
Q Consensus 190 ~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 231 (568)
.+|-.+|++++|.+.+.+|-+..|.+.++.+++.++.+....
T Consensus 506 GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 506 GLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred ccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 899999999999999999999888888777766666555443
No 229
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.31 E-value=5.6e-06 Score=83.39 Aligned_cols=158 Identities=18% Similarity=0.128 Sum_probs=120.8
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.|..+...+..|+.-..--....+++.|+.+..|++..+....++.+..+.++++.++-++-.|+ ...|.+....+...
T Consensus 235 ~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~-~~~k~Laf~a~~~i 313 (422)
T COG0738 235 NKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRI-KPEKYLAFYALIAI 313 (422)
T ss_pred ChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CHHHHHHHHHHHHH
Confidence 34455666666665555556678999999988999999999999999999999999999999999 88888887766555
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
+-++...++ ++... +.+.++.|+..+.++|+..+...+..|++. . .-+..-.
T Consensus 314 ll~~~~~l~-------------------~g~v~-~~~l~~ig~F~simfPTIfslal~~l~~~t-------s-~~s~~l~ 365 (422)
T COG0738 314 LLLLAVALI-------------------GGVVA-LYALFLIGLFNSIMFPTIFSLALKNLGEHT-------S-VGSGLLV 365 (422)
T ss_pred HHHHHHHHh-------------------cChHH-HHHHHHHHHHhHHHHHHHHHHHHhccCccc-------c-ccceeee
Confidence 555555555 23333 334578899999999999999999999433 2 2223333
Q ss_pred HHHHhHHHhhhhhhheeccccchhhhh
Q 008355 188 SINIGALVASSVLVWIQMNVGWGWGFG 214 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g~~~~f~ 214 (568)
...+|+.+-|.+.|++.|..|-...+.
T Consensus 366 maivGGAiiP~l~G~i~d~~g~~~~~~ 392 (422)
T COG0738 366 MAIVGGAIIPPLQGVIADMFGIQLTFL 392 (422)
T ss_pred eheecchHHHHHHHHHHHhhhhHHHHH
Confidence 556888889999999999999887766
No 230
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.30 E-value=5.6e-07 Score=91.57 Aligned_cols=180 Identities=14% Similarity=0.058 Sum_probs=125.0
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhh--------hhhhHHHHHHHHHh-hhhhHHHHhhhccCchHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVT--------ASNNVTNWSGTCYI-TPLIGAFLADSYMGRFWTI 99 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~--------~g~~~~~~~~~~~i-~~~~~G~laDr~~Grk~~~ 99 (568)
+.++...+..|+..+++|+.-.+...-++ ..|+.+.. ....+.+...++.+ +..+..++.|++ |||+..
T Consensus 304 ~~Llgt~~~WFllDiafy~~nL~~s~I~~-~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~i-GRk~iq 381 (538)
T KOG0252|consen 304 KHLLGTAGTWFLLDIAFYGQNLFQSVIFS-AIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDII-GRKYIQ 381 (538)
T ss_pred HHHHHHHHHHHhhhhhhhccccHHHHHHH-hhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehh-hhHHHH
Confidence 55666777788888888877666665544 34444332 22223334444443 777788899999 999999
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhh
Q 008355 100 ASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKS 179 (568)
Q Consensus 100 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 179 (568)
+.|.+++++..+.++.. . ++...+...+...-+.+-++..+...+.-.+.+|.||.+. |+
T Consensus 382 ~~GF~~~~i~~~~~~~~----y----------~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParv------R~ 441 (538)
T KOG0252|consen 382 LMGFFIMTIFFFVIAGP----Y----------NQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARV------RS 441 (538)
T ss_pred HhhHHHHHHHHHHHcCC----c----------ccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHH------hh
Confidence 99999888887777654 1 1100111112222223445555555667777899999999 99
Q ss_pred hhhhhHHHHHHHhHHHhhhhhhheec-----cccchhhhhHHHHHHHHHHHHHHhc
Q 008355 180 SFFNWFYLSINIGALVASSVLVWIQM-----NVGWGWGFGIPAVAMAIAVVFFFSG 230 (568)
Q Consensus 180 ~~~~~~~~~~~ig~~~~p~~~~~i~~-----~~g~~~~f~~~~~~~~~~~~~~~~~ 230 (568)
++.|+.....-+|+++|.....++.+ ..|.+..|++.+...++..+..++.
T Consensus 442 t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l~ 497 (538)
T KOG0252|consen 442 TCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLLI 497 (538)
T ss_pred hhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEEe
Confidence 99999999999999999999999988 7789999998888777776654443
No 231
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.29 E-value=1.8e-05 Score=74.93 Aligned_cols=149 Identities=19% Similarity=0.178 Sum_probs=92.1
Q ss_pred HHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCC
Q 008355 54 NYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHP 133 (568)
Q Consensus 54 ~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (568)
.|+.+.+|+...++|....+.....+++..+.|-++||. |||+......+ ..+++.++.
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkq-GRKracvtyci----tYiLsCiTK---------------- 119 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQ-GRKRACVTYCI----TYILSCITK---------------- 119 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhh-ccccceeeehH----HHHHHHHhh----------------
Confidence 456677899899999998888888899999999999999 99997655443 344444431
Q ss_pred CCchhHHHHHHHHHHHhhcccCccccccc-ccccCCCCCchhhhhhhhhhhh-HHHHHHHh----HHHhhhhhhheeccc
Q 008355 134 TGAQTAVTFVALYLIALGTGGIKPCVSSF-GADQFDETDDGEREKKSSFFNW-FYLSINIG----ALVASSVLVWIQMNV 207 (568)
Q Consensus 134 ~~~~~~~~~~~~~l~g~g~g~~~~~~~~~-~~~~~~~~~~~~~~~r~~~~~~-~~~~~~ig----~~~~p~~~~~i~~~~ 207 (568)
.+++.-+++++|++-|++.....++..+. ++|.-+++.- -....+. +.=+..+| ++++.+.+-.+.+.+
T Consensus 120 hSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~F-----eqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~ 194 (454)
T KOG4332|consen 120 HSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGF-----EQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTF 194 (454)
T ss_pred cCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCC-----hHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHh
Confidence 12456779999999999998887776654 3554433221 0111111 22122222 233333333444444
Q ss_pred --cchhhhhHHHHHHHHHHHHHH
Q 008355 208 --GWGWGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 208 --g~~~~f~~~~~~~~~~~~~~~ 228 (568)
|--.+|-..+++..++..+++
T Consensus 195 slGPVAPFdAAacfLaigmAvil 217 (454)
T KOG4332|consen 195 SLGPVAPFDAAACFLAIGMAVIL 217 (454)
T ss_pred ccCCCCchHHHHHHHHHHHHHHH
Confidence 455667666666666555544
No 232
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.28 E-value=9.9e-06 Score=80.08 Aligned_cols=152 Identities=22% Similarity=0.275 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCh--hhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhcc
Q 008355 43 LAYYGMSTNLVNYLQKQLNQGN--VTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVS 120 (568)
Q Consensus 43 ~~~~~~~~~l~~yl~~~lg~s~--~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~ 120 (568)
..........+.+.. +.+.+. ...++..+.+.+...++.++.|+++||+ |||+.+..+.....++.+++.+..+
T Consensus 16 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-g~~~~~~~~~~~~~~~~~~~~~~~~-- 91 (338)
T COG0477 16 LDLGLLSPALPLLLS-TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRY-GRRKVLIIGLLLFLLGTLLLALAPN-- 91 (338)
T ss_pred HhcchHHHHHHHHHH-HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccc-cchHHHHHHHHHHHHHHHHHHhCcc--
Confidence 333333344444444 454444 4788999999999999999999999999 9998888887765555555555411
Q ss_pred CCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCC-CCchhhhhhhhhhhhHHH-HHHHhHHHhhh
Q 008355 121 GLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDE-TDDGEREKKSSFFNWFYL-SINIGALVASS 198 (568)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~-~~~~~~~~r~~~~~~~~~-~~~ig~~~~p~ 198 (568)
.+...+++.|+.+|++.+...+...+++.|.+|+ ++ |+...+.... ...+|..++|.
T Consensus 92 ---------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 150 (338)
T COG0477 92 ---------------VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATE------RGLAVGLVTLGAGALGLALGPL 150 (338)
T ss_pred ---------------chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhH------HHHHHHHHHHHHHHHHHHHHHH
Confidence 2477889999999999999999999999999987 44 8888888777 57888888887
Q ss_pred hhhheecc--ccchhhhhHHHHH
Q 008355 199 VLVWIQMN--VGWGWGFGIPAVA 219 (568)
Q Consensus 199 ~~~~i~~~--~g~~~~f~~~~~~ 219 (568)
+++.+... .+|++.|......
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~ 173 (338)
T COG0477 151 LAGLLLGALLWGWRAAFLLAALL 173 (338)
T ss_pred HHHHHHHHHhcchHHHHHHHHHH
Confidence 77665543 5788866555443
No 233
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.21 E-value=0.00044 Score=71.18 Aligned_cols=131 Identities=15% Similarity=0.111 Sum_probs=83.0
Q ss_pred hhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHH
Q 008355 68 SNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYL 147 (568)
Q Consensus 68 g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 147 (568)
+.++.+-.+-..+..+.+-++.+|+ -.+.=+.+..++.++++++.+++ .+.+.-+++..+
T Consensus 62 ~~Vlladi~P~l~~Kl~aP~fi~~v-~y~~Ri~~~~~l~~~g~l~va~~-------------------~~v~~~l~Gv~l 121 (402)
T PF02487_consen 62 GAVLLADILPSLLVKLIAPFFIHRV-PYWIRILICVALSAAGMLLVAFS-------------------PSVWVRLLGVVL 121 (402)
T ss_pred hHHHHHHHHHHHHHHHHhHhhhhhc-cchHHHHHHHHHHHHHHhheeec-------------------cchhHHHHHHHH
Confidence 4455555666677778888999988 64444455566777788877776 456777788888
Q ss_pred HHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheecccc--chhhhhHHHHHHHHHHH
Q 008355 148 IALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVG--WGWGFGIPAVAMAIAVV 225 (568)
Q Consensus 148 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g--~~~~f~~~~~~~~~~~~ 225 (568)
.+++.|..-...-++.+ .+++. ..+-+..+...++++|+..-..+.. .| .|..+++..+..++-++
T Consensus 122 as~ssg~GE~tfL~lt~-~y~~~----------~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~ 189 (402)
T PF02487_consen 122 ASLSSGLGEVTFLSLTH-FYGKS----------SLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLL 189 (402)
T ss_pred HhhhhhhhHHHHHHHHH-hcCcc----------ccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHH
Confidence 89988887777666644 44432 2455566666777777665444444 44 45566665555444444
Q ss_pred HHHhc
Q 008355 226 FFFSG 230 (568)
Q Consensus 226 ~~~~~ 230 (568)
.+++.
T Consensus 190 ~~f~~ 194 (402)
T PF02487_consen 190 SYFFL 194 (402)
T ss_pred HHHHh
Confidence 44433
No 234
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.19 E-value=9.1e-05 Score=76.18 Aligned_cols=156 Identities=13% Similarity=0.070 Sum_probs=111.3
Q ss_pred HHHHHHHHHHH-hCCChhhhh-hhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 008355 49 STNLVNYLQKQ-LNQGNVTAS-NNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSC 126 (568)
Q Consensus 49 ~~~l~~yl~~~-lg~s~~~~g-~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 126 (568)
-+++..|+.+. .|++..++. -+.-...-.+.+.-++...++|.+ |.|++++++.+...+...++-+.
T Consensus 23 EPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l-~Ykpviil~~~~~i~t~~lll~~---------- 91 (412)
T PF01770_consen 23 EPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYL-RYKPVIILQALSYIITWLLLLFG---------- 91 (412)
T ss_pred CccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHHHH----------
Confidence 35788999887 999998875 344445556667888889999999 99999999988877777777777
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheec-
Q 008355 127 DKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQM- 205 (568)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~- 205 (568)
.+...+.+..+.-|++.+.. .+..+++-...|+++ -.++.+....+.-+|-.++.+++-.+..
T Consensus 92 ---------~sv~~mq~~q~~yg~~~a~e-vay~sYiys~v~~~~------yq~vts~~raa~l~g~~~s~~lgQllvs~ 155 (412)
T PF01770_consen 92 ---------TSVLAMQLMQFFYGLATAAE-VAYYSYIYSVVDKEH------YQKVTSYTRAATLVGRFISSLLGQLLVSF 155 (412)
T ss_pred ---------CcHHHHHHHHHHHHHHHHHH-HHHHHHheeecCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34666777777878777763 355566666666665 6667777777777787777776655543
Q ss_pred -cccchhhhhHHHHHHHHHHHHHHhcC
Q 008355 206 -NVGWGWGFGIPAVAMAIAVVFFFSGS 231 (568)
Q Consensus 206 -~~g~~~~f~~~~~~~~~~~~~~~~~~ 231 (568)
..++.....+......+++++.++.+
T Consensus 156 ~~~sy~~L~~isl~~~~~a~~~~~fLP 182 (412)
T PF01770_consen 156 GGVSYFQLNYISLASVSLALLIALFLP 182 (412)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 34466666666666666666554443
No 235
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.18 E-value=1.8e-05 Score=80.82 Aligned_cols=166 Identities=12% Similarity=0.097 Sum_probs=126.3
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhc---cCchHHHH-HHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSY---MGRFWTIA-SFSI 104 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~---~Grk~~~~-~~~~ 104 (568)
+.++.+....+...+++-.=..++++|++ .+|.+....+++-.+..+...+.+|+.|..+||. +||||-++ .+.+
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~-~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQ-SLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHH-HcCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 56778888888889988888889999987 5999999999999999999999999999999986 47766555 4555
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhh-hhh
Q 008355 105 IYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSS-FFN 183 (568)
Q Consensus 105 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~-~~~ 183 (568)
..+++.++.+.++.+.... +|+.-.-...-....++++..+.-++.-..+..+-++.+|....++ +.+ +.+
T Consensus 111 ~i~~~l~Lig~aaDig~~l--gd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~------~~~~Ans 182 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLL--GDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDA------KKTRANS 182 (498)
T ss_pred HHHHHHhhhhhHhhhhHHh--cCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChh------hhhccch
Confidence 6777777777775443311 0111000112345567778888888888888999999999997766 333 999
Q ss_pred hHHHHHHHhHHHhhhhhhhe
Q 008355 184 WFYLSINIGALVASSVLVWI 203 (568)
Q Consensus 184 ~~~~~~~ig~~~~p~~~~~i 203 (568)
++.....+|+.+|..++++.
T Consensus 183 ~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hHHHHHHhcceeeeeccccc
Confidence 99999999999998877643
No 236
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.17 E-value=3.1e-05 Score=78.77 Aligned_cols=168 Identities=17% Similarity=0.206 Sum_probs=131.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhh
Q 008355 38 ECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTA 117 (568)
Q Consensus 38 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~ 117 (568)
.++..+++..==..+=+|--+.+|++..+....+.....+..++....|++..|-.++++....|....+++..+..++.
T Consensus 217 l~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~ 296 (403)
T PF03209_consen 217 LFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAG 296 (403)
T ss_pred HHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 33334443333344556777789999999999999999999999999999988555899988899888888887766653
Q ss_pred hccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhh
Q 008355 118 SVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVAS 197 (568)
Q Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p 197 (568)
.. .+.+.+..+.++.|+|.|.+....-+.+-|+.++++ .|..+|.+.....++..+|-
T Consensus 297 ~~----------------~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~------aG~~mG~WGaaQA~A~Glg~ 354 (403)
T PF03209_consen 297 PL----------------GSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGR------AGLFMGAWGAAQAIARGLGT 354 (403)
T ss_pred hc----------------ccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcc------hhHHHHHHHHHHHHHHHHHH
Confidence 22 357889999999999999999999999999998887 88999999999988888888
Q ss_pred hhhhheec----------cccchhhhhHHHHHHHHHHHHH
Q 008355 198 SVLVWIQM----------NVGWGWGFGIPAVAMAIAVVFF 227 (568)
Q Consensus 198 ~~~~~i~~----------~~g~~~~f~~~~~~~~~~~~~~ 227 (568)
.++|.+.| ..+|..+|.+-++..++++.+.
T Consensus 355 ~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 355 FLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 88876644 2347777777776666665543
No 237
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.13 E-value=4.6e-08 Score=104.32 Aligned_cols=185 Identities=14% Similarity=0.059 Sum_probs=111.0
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLG 109 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 109 (568)
.+...+....+.++..+....+...++.+..+.+.. -.......+...++.+++.++.||+ |||+.++.+.++.++.
T Consensus 253 ~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-GRr~~~i~~~~~~~~~ 329 (451)
T PF00083_consen 253 RLLIALLLQFFQQFSGINFIFYYSPSIFENAGISNS--FLATLILGLVNFLGTLLAIFLIDRF-GRRKLLIIGLLLMAIC 329 (451)
T ss_pred cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccc-cccccccccccccccc
Confidence 344444445555444443444444455556676665 2223344566667788888999999 9999999998887777
Q ss_pred HHHHH-HhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 110 MTLLT-LTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 110 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
.+.++ .....+. .+...+...+....+.......+..+....+.+|.+|.+. |.++.++.+..
T Consensus 330 ~~~~~~~~~~~~~----------~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~------R~~~~~~~~~~ 393 (451)
T PF00083_consen 330 SLILGIIFFLGVS----------SSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKV------RSTGIGLSYAV 393 (451)
T ss_pred ccccccccccccc----------cccccccccceeeeeccccccccccccccccccccccccc------ccccccccccc
Confidence 76664 1100000 0000112211111111111222334666788899999999 99999999888
Q ss_pred HHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHHHHhcCce
Q 008355 189 INIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVFFFSGSRL 233 (568)
Q Consensus 189 ~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~ 233 (568)
..+++.++|.+...+.+..+-...|++.+...++..+..++..|+
T Consensus 394 ~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~lpE 438 (451)
T PF00083_consen 394 GRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFLPE 438 (451)
T ss_pred ccccccccccccccccccccccccchhhHHHHHHHHhheeEEEee
Confidence 899999999988888877763445555555444454444444443
No 238
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.13 E-value=1.7e-05 Score=61.80 Aligned_cols=69 Identities=19% Similarity=0.081 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHH
Q 008355 35 LGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSII 105 (568)
Q Consensus 35 ~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~ 105 (568)
-...++...+...+.++++.|+++ .|++..++|.+.++..+...+++++.|+++||+ |+++.+..+..+
T Consensus 6 k~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~-~~~~~~l~~~~~ 74 (77)
T PF12832_consen 6 KAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKF-GKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CccHHHHHHHHH
Confidence 344555666666788999999984 999999999999999999999999999999999 888888776554
No 239
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.11 E-value=2.1e-05 Score=83.49 Aligned_cols=205 Identities=12% Similarity=0.032 Sum_probs=143.0
Q ss_pred cCCCcceehhHhhHHHHHHHHHHHHHHHHHHHHHH-HhCCChh-----h-----hhhhHHHHHHHHHhhhhhHHHHhhhc
Q 008355 24 KTGNWKACRFILGNECCERLAYYGMSTNLVNYLQK-QLNQGNV-----T-----ASNNVTNWSGTCYITPLIGAFLADSY 92 (568)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~-~lg~s~~-----~-----~g~~~~~~~~~~~i~~~~~G~laDr~ 92 (568)
.++.+|.++.+++.+++..++++.+..+.+.|+-+ .++-++. + ..+....+.+...+.+++--++.+|+
T Consensus 253 ~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~ 332 (477)
T TIGR01301 253 FKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGW 332 (477)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34457899999999999999999999999999875 3443221 1 22444455666667777788899999
Q ss_pred cCc-hHHHHHHHHHHHHHHHHHHHhhhccC-CCC-CCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCC
Q 008355 93 MGR-FWTIASFSIIYCLGMTLLTLTASVSG-LKP-SCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDE 169 (568)
Q Consensus 93 ~Gr-k~~~~~~~~~~~i~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~ 169 (568)
|+ |++..++.++.+++.....+.++++. ... ..+++..+......+..++...+.|+..+.......+++++..++
T Consensus 333 -g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~ 411 (477)
T TIGR01301 333 -GAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSN 411 (477)
T ss_pred -ccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccc
Confidence 85 67768887888888877765533211 000 000011111112235666777888999999999999999999986
Q ss_pred CCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheecccc--chhhhhHHHHHHHHHHHHHHhcCce
Q 008355 170 TDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVG--WGWGFGIPAVAMAIAVVFFFSGSRL 233 (568)
Q Consensus 170 ~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g--~~~~f~~~~~~~~~~~~~~~~~~~~ 233 (568)
+..+ .|..+|+++.++.+..++..+..|.+.+.+| -.+.+.++++..+++.+..+...|+
T Consensus 412 ~~~~----~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 412 LGAG----QGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred cCCC----CcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 4411 6999999999999999999988887655554 4567777788777777766665553
No 240
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.11 E-value=1.1e-05 Score=85.93 Aligned_cols=163 Identities=15% Similarity=0.137 Sum_probs=110.0
Q ss_pred eehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhh----ccCchHHHHHHHHH
Q 008355 30 ACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADS----YMGRFWTIASFSII 105 (568)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr----~~Grk~~~~~~~~~ 105 (568)
.+|...+..++.....|++..|+|.|+++..|+|..+++.+...+.++..++.+++|+++|| . .+|..+.....+
T Consensus 274 ~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~-~~~~~~~~~~~~ 352 (495)
T KOG2533|consen 274 GVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIF-ARRLLFIVFLCL 352 (495)
T ss_pred hHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhH-HHHHHHHHHHHH
Confidence 57999999999999999999999999998677999999999999999999999999999999 5 666666665554
Q ss_pred HH-HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhh
Q 008355 106 YC-LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNW 184 (568)
Q Consensus 106 ~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 184 (568)
.. ++.+.+...+ +......+.+....+.....++...-..+...++.+ |-+..+.
T Consensus 353 ~~~~g~~~l~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k-----~~~~~~~ 408 (495)
T KOG2533|consen 353 YAIIGAISLLAAA-------------------VLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTK-----ALTTVSA 408 (495)
T ss_pred HHHHHHHHHHhhc-------------------cchHHhHHHHhcchhhHHHHHHHHhhccccccchHH-----hHHHHhh
Confidence 44 3334433331 122222222233344444445555556666655542 5555556
Q ss_pred HHHHHHHhHHHhhhh-hhheeccccchhhhhHHH
Q 008355 185 FYLSINIGALVASSV-LVWIQMNVGWGWGFGIPA 217 (568)
Q Consensus 185 ~~~~~~ig~~~~p~~-~~~i~~~~g~~~~f~~~~ 217 (568)
+..+.+.++.++|.+ -+.....++|...|....
T Consensus 409 ~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~~ 442 (495)
T KOG2533|consen 409 IIDGTGSAGAISGQLFRSLDAPRYGWGAVFYMLV 442 (495)
T ss_pred hhcchhHHHHhhhhhcccccCcchhhhhHHHHHH
Confidence 555555555554443 445555678998885443
No 241
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.09 E-value=3.7e-05 Score=83.14 Aligned_cols=149 Identities=13% Similarity=-0.013 Sum_probs=103.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHH--HhCCChh------hhhhhHHHHHHHHHhhhhhH----HHHhhhccCchHHHHHHH
Q 008355 36 GNECCERLAYYGMSTNLVNYLQK--QLNQGNV------TASNNVTNWSGTCYITPLIG----AFLADSYMGRFWTIASFS 103 (568)
Q Consensus 36 ~~~~~~~~~~~~~~~~l~~yl~~--~lg~s~~------~~g~~~~~~~~~~~i~~~~~----G~laDr~~Grk~~~~~~~ 103 (568)
+..++....+|.+..-++.++.. ..+.+.. ..+++.+.-.+...+..++. +++.||+ +..+.+.+|.
T Consensus 279 ~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~-~~~~~~~~G~ 357 (500)
T PRK09584 279 FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRL-PMPHKFAIGM 357 (500)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCC-CcHHHHHHHH
Confidence 33445566666666666666543 1112211 14455555555555666666 5556665 6678888999
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhh
Q 008355 104 IIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFN 183 (568)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (568)
++.+++.+.++.+...+. ++...+.+.++...++.++|.+...|...+++.+..|++. |++.+|
T Consensus 358 ~l~~l~f~~l~~~~~~~~----------~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~------rg~~~g 421 (500)
T PRK09584 358 VLCSGAFLVLPLGAKFAN----------DAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRL------MGFIMG 421 (500)
T ss_pred HHHHHHHHHHHHHHHhcC----------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHH------HHHHHH
Confidence 999999888877643221 0112345678889999999999999999999999999998 999999
Q ss_pred hHHHHHHHhHHHhhhhhh
Q 008355 184 WFYLSINIGALVASSVLV 201 (568)
Q Consensus 184 ~~~~~~~ig~~~~p~~~~ 201 (568)
.+.+...+|+.++..+..
T Consensus 422 ~~~l~~a~g~~~~g~~~~ 439 (500)
T PRK09584 422 SWFLTTAGAALIAGYVAN 439 (500)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 998888888877766654
No 242
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.02 E-value=3.4e-05 Score=83.07 Aligned_cols=149 Identities=11% Similarity=0.008 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChh----hhhhhHHHHHHHHHhhhhhHHHHhhhccCchHH-------HHHHHHHH
Q 008355 38 ECCERLAYYGMSTNLVNYLQKQLNQGNV----TASNNVTNWSGTCYITPLIGAFLADSYMGRFWT-------IASFSIIY 106 (568)
Q Consensus 38 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~----~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~-------~~~~~~~~ 106 (568)
..+....+......++.|.++..+.+.. ...++.+...+...+..|+.|++.||+ |+|+. +.+|.++.
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl-~~r~~~~~~~~k~~~G~~l~ 356 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHL-GSKGKDLSMPMKFTLGMFLC 356 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHH-hhCCCCCCcHHHHHHHHHHH
Confidence 4445555555657778888754333210 123333444556667888899999999 98873 67777777
Q ss_pred HHHHHHHHHhhh-ccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 107 CLGMTLLTLTAS-VSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 107 ~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
+++.+.++.... ... .+...+.+.+....++.|+|.+...|...+++.+..|++. ++.+++++
T Consensus 357 ~~~~~~~~~~~~~~~~----------~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~------~g~~~g~~ 420 (489)
T PRK10207 357 SLGFLTAAAAGMWFAD----------AQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHL------MGFILGMW 420 (489)
T ss_pred HHHHHHHHHHHHhhcC----------CCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHH------HHHHHHHH
Confidence 777655432110 000 0011346667788889999999999999999999999998 99999999
Q ss_pred HHHHHHhHHHhhhhhhhe
Q 008355 186 YLSINIGALVASSVLVWI 203 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i 203 (568)
++..++|..+|..++...
T Consensus 421 ~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 421 FLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999998877544
No 243
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=97.91 E-value=1.1e-05 Score=86.53 Aligned_cols=136 Identities=10% Similarity=-0.058 Sum_probs=107.5
Q ss_pred HHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCc
Q 008355 57 QKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGA 136 (568)
Q Consensus 57 ~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (568)
++.+|+++.+.|.+.....++..++....+++.+|+ +.|+++.++.++.+++............. .....
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~-~~r~~l~~~~~l~~~~~~~~~~l~~~~~~---------~~gi~ 349 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTF-PYRLLFGVTTLLYTLSSLFDLILVKRWNL---------AFGIS 349 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHhCceeeeecccc---------ccCCC
Confidence 457899999999999999999999999999999999 99999999988888877554321100000 00001
Q ss_pred hhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheecccc
Q 008355 137 QTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVG 208 (568)
Q Consensus 137 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g 208 (568)
+.+.+...-++.+++.+....+...++.+..|++. +++.++++....++|..+++.+++.+.+..|
T Consensus 350 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~------egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 350 DEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGC------ESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred CeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCc------eehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 22334455667788888888888999999999998 9999999999999999999999999988777
No 244
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.87 E-value=0.0047 Score=64.70 Aligned_cols=187 Identities=10% Similarity=-0.111 Sum_probs=103.2
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGM 110 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 110 (568)
.+.+....++.+..--..-.-.+.|+.+-+.-+.--.+.....-.+..+++.+..|.+.||. -|.+++..+.+..-+..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~-~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRS-PRLKVIRTSLVVQNLSV 82 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCC-cchhhHHHHHHHHHHHH
Confidence 34555555555555555555567788776554544455555666778888999999999999 99998887765433222
Q ss_pred H----HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHH-HHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhH
Q 008355 111 T----LLTLTASVSGLKPSCDKDACHPTGAQTAVTFVA-LYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWF 185 (568)
Q Consensus 111 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~ 185 (568)
. ++......+.. -+........+++. .++..+..=.......+.=-|+...=..++...+.+..+..
T Consensus 83 ~~s~~~~~~l~~~~~~--------~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~m 154 (432)
T PF06963_consen 83 AASCALFLLLLSYPSS--------SSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATM 154 (432)
T ss_pred HHHHHHHHHHHhCCcc--------ccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHH
Confidence 2 22211111110 00001112222222 22222222221222233334443321111222366677777
Q ss_pred HHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHHH
Q 008355 186 YLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVVF 226 (568)
Q Consensus 186 ~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~~ 226 (568)
.=.-.+--+++|++.|.+....+......+.+...++++..
T Consensus 155 RRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~v 195 (432)
T PF06963_consen 155 RRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFV 195 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHH
Confidence 77778889999999999988888777666666555555543
No 245
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=97.84 E-value=0.0027 Score=63.65 Aligned_cols=159 Identities=12% Similarity=0.093 Sum_probs=91.2
Q ss_pred CCCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhh-----hccCchHHH
Q 008355 25 TGNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLAD-----SYMGRFWTI 99 (568)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laD-----r~~Grk~~~ 99 (568)
++..+++..+++..++...- +++...+|..++ ..|.|-++.+... +...-.-..++...+.| |+ ||||.-
T Consensus 27 ~~d~~~illLl~LYllQGiP-~GL~~~iP~lL~-ak~vSyt~~a~fS--~ay~P~sLKllWaPiVDs~y~k~~-GrrksW 101 (510)
T KOG3574|consen 27 KGDRSSILLLLFLYLLQGIP-LGLIGAIPLLLQ-AKGVSYTSQAIFS--FAYWPFSLKLLWAPIVDSVYSKRF-GRRKSW 101 (510)
T ss_pred hhhhhhHHHHHHHHHHcCCc-hhHhhhhHHHhc-CCCcchhhhhhhh--hhhhHHHHHHHHHhhhHHHHHHhh-ccccce
Confidence 34456677777777666555 466666665555 5677766655322 22222344667777888 98 988864
Q ss_pred HH-HHHHHHHHHHHHHHhhhccCCCCCCCCCCCCC-CCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhh
Q 008355 100 AS-FSIIYCLGMTLLTLTASVSGLKPSCDKDACHP-TGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREK 177 (568)
Q Consensus 100 ~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~ 177 (568)
++ +..+ +|..+..++--++. ..-.+ ..++...+....++.-+..+.--.++-...-.+..+++
T Consensus 102 vvp~q~l--lG~~mllLs~~v~~-------~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~------ 166 (510)
T KOG3574|consen 102 VVPCQYL--LGLFMLLLSYLVDR-------GLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSREN------ 166 (510)
T ss_pred eeehHHH--HHHHHHHHhhCCCc-------ccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhh------
Confidence 43 2223 33333333311111 00111 22344434344455556666555566666666777777
Q ss_pred hhhhhhhHHHHHHHhHHHhhhhhhhe
Q 008355 178 KSSFFNWFYLSINIGALVASSVLVWI 203 (568)
Q Consensus 178 r~~~~~~~~~~~~ig~~~~p~~~~~i 203 (568)
.|-+.....++.+.|..++..+.-.+
T Consensus 167 lgyaST~q~Vg~~~GyfL~~~ifLaL 192 (510)
T KOG3574|consen 167 LGYASTCQSVGQTAGYFLGNVVFLAL 192 (510)
T ss_pred cCchhHHHHHHHhhhHHhhcceeeEe
Confidence 88888888888899998887665444
No 246
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.82 E-value=0.00014 Score=77.75 Aligned_cols=115 Identities=12% Similarity=0.116 Sum_probs=78.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChh--
Q 008355 407 TQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDA-- 484 (568)
Q Consensus 407 ~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~-- 484 (568)
++++.+.+|.++.+++.+.++... .+.........+..+|.++..+...+++.|++|++
T Consensus 74 Grrr~iliG~il~~lg~lll~~~~-------------------~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~ 134 (493)
T PRK15462 74 GNRMAVMLGALLMAIGHVVLGASE-------------------IHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDP 134 (493)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhh-------------------cchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCc
Confidence 334567888888888876554221 01122333444555666666677788999999975
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 008355 485 MRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAK 556 (568)
Q Consensus 485 ~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~ 556 (568)
.|..+.+++....++|+.++|.+.+.+.+.. || +..|.+.++..+++.+.++...+
T Consensus 135 ~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~------Gw----------~~~F~iaaigm~l~li~~~~~~~ 190 (493)
T PRK15462 135 RRDGGFSLMYAAGNVGSIIAPIACGYAQEEY------SW----------AMGFGLAAVGMIAGLVIFLCGNR 190 (493)
T ss_pred cccceehHHHHHHHHHHHHHHHHHHHHHhhh------Ch----------HHHHHHHHHHHHHHHHHHHHhhh
Confidence 7999999999999999999999999886533 34 45666666666666655554333
No 247
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.78 E-value=0.00034 Score=75.76 Aligned_cols=154 Identities=8% Similarity=-0.009 Sum_probs=111.0
Q ss_pred CCCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChh---hhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHH-H
Q 008355 25 TGNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNV---TASNNVTNWSGTCYITPLIGAFLADSYMGRFWTI-A 100 (568)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~---~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~-~ 100 (568)
.++.|.+...++..++....||.+..+.|......++-+.. ..++......++..++.++.|.+.-++ +|-|.. +
T Consensus 306 f~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~i-r~~Kw~li 384 (599)
T PF06609_consen 306 FKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKI-RHIKWQLI 384 (599)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHc-cchhHHHH
Confidence 34456777777888888888999888889888877766553 567777778888888899999999988 765554 5
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhh
Q 008355 101 SFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSS 180 (568)
Q Consensus 101 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~ 180 (568)
++.+++++++..++... | +|....+...++.|+|.|...........-..|+++ -+.
T Consensus 385 ~~~~~~ta~~Gama~~~--~---------------~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~------ig~ 441 (599)
T PF06609_consen 385 FGSVLMTAFCGAMAAVR--P---------------DNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDED------IGT 441 (599)
T ss_pred HHHHHHHHHHHHHHHcc--C---------------CCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchH------HHH
Confidence 66556655544444331 1 233344566778889988887777666666677766 888
Q ss_pred hhhhHHHHHHHhHHHhhhhhhh
Q 008355 181 FFNWFYLSINIGALVASSVLVW 202 (568)
Q Consensus 181 ~~~~~~~~~~ig~~~~p~~~~~ 202 (568)
+.++....-.+|+.+|..+...
T Consensus 442 a~gL~~s~R~~GGsIg~aIy~~ 463 (599)
T PF06609_consen 442 ATGLTGSIRSIGGSIGYAIYNA 463 (599)
T ss_pred HHHHHHHHHHHhhHHHHHHHHH
Confidence 8888888888888877766543
No 248
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.74 E-value=0.012 Score=62.38 Aligned_cols=160 Identities=12% Similarity=0.024 Sum_probs=97.3
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCh-----hhhhhhHHHHHHHHHhh-hhhHHHHhhhccCchHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGN-----VTASNNVTNWSGTCYIT-PLIGAFLADSYMGRFWTIAS 101 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~-----~~~g~~~~~~~~~~~i~-~~~~G~laDr~~Grk~~~~~ 101 (568)
+|.++...+.-++.-+.|+.+.+ +++.+..+. ....++-....+...+. .++-+++++|+ +|++.+.+
T Consensus 6 ~~k~~~~~l~fF~il~~Y~iLR~-----lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~-~~~~lf~~ 79 (472)
T TIGR00769 6 LKKFLPLFLMFFCILFNYTILRD-----TKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNIL-SKEALFYT 79 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-----hhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHhHHH
Confidence 34456666666676666665543 556665532 34555555444444433 78899999999 99999988
Q ss_pred HHHHHHHHHHHHHHhhhccCCC---C--CCCCCCCCCCCc---------hhH---HHHHHHHHHHhhcccCcc-cccccc
Q 008355 102 FSIIYCLGMTLLTLTASVSGLK---P--SCDKDACHPTGA---------QTA---VTFVALYLIALGTGGIKP-CVSSFG 163 (568)
Q Consensus 102 ~~~~~~i~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~---------~~~---~~~~~~~l~g~g~g~~~~-~~~~~~ 163 (568)
....+.....++++.- .|.-. + .+|+.. ..-+. +.| .+++. ..+-.....+ ..++++
T Consensus 80 ~~~~F~~~f~lF~~vl-~p~~~~~~p~~~~~~~~-~~~~~~~~~~i~~~~~W~~~~FYv~---~elw~~~vvS~lFW~fa 154 (472)
T TIGR00769 80 VISPFLGFFALFAFVI-YPLSDLLHPTALADKLL-SLLPPGFMGFIAILRIWSFALFYVM---AELWGSVVLSLLFWGFA 154 (472)
T ss_pred HHHHHHHHHHHHHHHH-hcchhhcCCcHHHHHHH-hhcchhhHHHHHHHhhhhHHHHHHH---HHHHHHHHHHHHHHHHH
Confidence 8777777777666541 12100 0 000000 00000 011 22222 1221122222 667899
Q ss_pred cccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhhee
Q 008355 164 ADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQ 204 (568)
Q Consensus 164 ~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~ 204 (568)
+|.+..+| -.|.++++..+.|+|..+++.+..++.
T Consensus 155 ndi~t~~q------akRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 155 NQITTIDE------AKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HhcCCHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888 889999999999999999999888765
No 249
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.74 E-value=8e-05 Score=82.69 Aligned_cols=133 Identities=11% Similarity=0.074 Sum_probs=91.3
Q ss_pred hhhccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhc-----------
Q 008355 371 ASLSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKR----------- 439 (568)
Q Consensus 371 ~~~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~----------- 439 (568)
+.+.+...++..+..+++++ +.+|. ++++.+.+|.++++++.+++++.+-....+...
T Consensus 71 G~i~s~~~i~~~~~~i~v~~----~~~r~-------~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~ 139 (633)
T TIGR00805 71 GLINGSYEIGNLLLIIFVSY----FGTKL-------HRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSS 139 (633)
T ss_pred eeeeehhhHHHHHHHHHHHH----hhccc-------CcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccc
Confidence 34455555666666666665 45553 334578889999999988877664211000000
Q ss_pred --cCcCC----------------CCCc--eeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHH
Q 008355 440 --NNYYD----------------IETI--PMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAV 499 (568)
Q Consensus 440 --~~~~~----------------~~~~--~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~l 499 (568)
..++. ++.. ...+..+++.-++.|+|.+...+...+++.|.+|++.|+.+.|+++....+
T Consensus 140 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~i 219 (633)
T TIGR00805 140 ANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVF 219 (633)
T ss_pred cccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHh
Confidence 00000 0000 113445666788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhh
Q 008355 500 GNYLSTLLVTIVTKV 514 (568)
Q Consensus 500 g~~lg~~l~~~i~~~ 514 (568)
|..+|+.+++.+.+.
T Consensus 220 G~~lG~llgg~l~~~ 234 (633)
T TIGR00805 220 GPAFGYLLGSFCLQI 234 (633)
T ss_pred hhHHHHHHHHHHHhc
Confidence 999999999987654
No 250
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.67 E-value=0.001 Score=69.73 Aligned_cols=85 Identities=11% Similarity=0.114 Sum_probs=73.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhh
Q 008355 406 FTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAM 485 (568)
Q Consensus 406 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~ 485 (568)
.+.++.+.++++..++..++.++.. +...+.+.-+++|++++... +...++++.+|++.
T Consensus 89 lG~K~vL~l~~l~Wsl~t~L~~fa~--------------------Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kE 147 (511)
T TIGR00806 89 LRYKPVLVLQALSFVCVWLLLLLGT--------------------SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSR 147 (511)
T ss_pred hCchHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHH
Confidence 3444578888888888888777665 56677778899999999999 89999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008355 486 RSLCSALSLTTVAVGNYLSTLLVTIV 511 (568)
Q Consensus 486 rg~~~g~~~~~~~lg~~lg~~l~~~i 511 (568)
|++++|+.+....+|..+++.+++.+
T Consensus 148 R~ratsi~~sg~~vG~~Ia~~L~qll 173 (511)
T TIGR00806 148 YQRAAAYSRAAVLLGVFLSSVLGQLL 173 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999983
No 251
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.63 E-value=0.00045 Score=75.07 Aligned_cols=185 Identities=13% Similarity=0.019 Sum_probs=103.0
Q ss_pred CcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHH
Q 008355 27 NWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIY 106 (568)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~ 106 (568)
.+|.....++...+.+++-+-...+-...+-+..|.+... .+...+..+...++..++.++.||+ |||+.++.+...+
T Consensus 292 ~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~-gRr~lll~s~~~m 369 (513)
T KOG0254|consen 292 VRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRF-GRRKLLLFGAAGM 369 (513)
T ss_pred hHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHh-ccHHHHHHhHHHH
Confidence 3444555555555555544333333333334556666443 4445556777778888889999999 9999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHH
Q 008355 107 CLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFY 186 (568)
Q Consensus 107 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 186 (568)
+++.++++........ +.-.........+....+.......+..|..+.+.+|.+|.+- |+++.++-.
T Consensus 370 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~------r~~~~s~~~ 437 (513)
T KOG0254|consen 370 SICLVILAVVGVFALY------YPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRL------RSKGASLAV 437 (513)
T ss_pred HHHHHHHHHHHHHhcc------CCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhH------HhhhHHHHH
Confidence 9999888765221110 0000011112222222222233333344566678899999998 999888866
Q ss_pred HHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHHHH
Q 008355 187 LSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIAVV 225 (568)
Q Consensus 187 ~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~~~ 225 (568)
....+...+-......+.+..++...|...+....+...
T Consensus 438 ~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~ 476 (513)
T KOG0254|consen 438 AVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLI 476 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH
Confidence 555555544333333333333334455444444433433
No 252
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.42 E-value=0.0025 Score=56.96 Aligned_cols=105 Identities=12% Similarity=0.167 Sum_probs=82.3
Q ss_pred hhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHH
Q 008355 69 NNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLI 148 (568)
Q Consensus 69 ~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 148 (568)
.-+++......+..++.+.+.+++ |.|+.+++|.+.+++....... .+.+.++.+-++.
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~l-g~K~sm~lg~~~y~~y~~~~~~--------------------~~~~~l~~~s~l~ 99 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKL-GPKWSMILGSLGYAIYIASFFY--------------------PNSYTLYPASALL 99 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHh--------------------hhHHHHHHHHHHH
Confidence 334555666777788888999999 9999999998877765544332 3577788999999
Q ss_pred HhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhh
Q 008355 149 ALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVL 200 (568)
Q Consensus 149 g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~ 200 (568)
|+|.+..+++...++.+..++++ |++-.+++....+.+.++|.++.
T Consensus 100 G~~~a~lW~aqg~ylt~~s~~~~------~~~~~~ifw~i~~~s~i~G~~~~ 145 (156)
T PF05978_consen 100 GFGAALLWTAQGTYLTSYSTEET------IGRNTGIFWAIFQSSLIFGNLFL 145 (156)
T ss_pred hhhhHHhhHhhhHHHHHcCCHHH------HhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999887776 88888887777777777665544
No 253
>PTZ00207 hypothetical protein; Provisional
Probab=97.39 E-value=0.0025 Score=69.47 Aligned_cols=119 Identities=7% Similarity=0.035 Sum_probs=83.4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhh
Q 008355 406 FTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAM 485 (568)
Q Consensus 406 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~ 485 (568)
.++++.+.+|.++.+++.+..+..... ....+.+.+.+..++.|+|.+...+.....+.+.+| +.
T Consensus 88 ~G~R~vllig~ll~~iG~ll~ala~~~--------------~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~ 152 (591)
T PTZ00207 88 LGPRPIFVLSMTVFCLGTLLFALTFQE--------------VIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SN 152 (591)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHHhcc--------------cccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hh
Confidence 455568899999999998887765211 011256666777788899999888888888899887 67
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 008355 486 RSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAK 556 (568)
Q Consensus 486 rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~ 556 (568)
||.+.|+......+|..+.+.+...+... +| ..+|++++++.++..++.+.+.+
T Consensus 153 RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~-------~~----------~~~fl~l~vl~~vv~ll~~~~vr 206 (591)
T PTZ00207 153 RGAVVAIMKTFTGLGSAILGSIQLAFFSD-------NT----------SAYFFFLMSFALVVGILAIVFMR 206 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hH----------HHHHHHHHHHHHHHHHHHHhhee
Confidence 99999999999999997644444333210 12 24567777777776665555544
No 254
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.20 E-value=0.0026 Score=65.42 Aligned_cols=186 Identities=13% Similarity=0.019 Sum_probs=116.3
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYC 107 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~ 107 (568)
.|+..+++++..+.-..+|++.+.+-.-+ ..-|.+...+|.......++++++..++|.++||...-|.++.+......
T Consensus 265 n~~F~il~~~ygi~~g~F~~l~~~l~~~l-~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~ 343 (480)
T KOG2563|consen 265 NRQFIILAICYGIGLGLFNSLSTLLNLAL-CPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFAL 343 (480)
T ss_pred CccHHHHHHHHhhhHHHHHHHHHHhhhcc-ccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHH
Confidence 35666777777777677776665554323 34677778899999999999999999999999999555666666666555
Q ss_pred HHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHH
Q 008355 108 LGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL 187 (568)
Q Consensus 108 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 187 (568)
++...+......+ ...+.++.--.+.|+..-+..|.---+..|..-|.. -+...|+.++
T Consensus 344 v~~~~l~~~t~~~---------------~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv~------E~tSsGll~~ 402 (480)
T KOG2563|consen 344 VGTLMLLTCTLFL---------------GDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPVA------EGTSSGLLNL 402 (480)
T ss_pred HHHHHHHHhhccC---------------CceEehhhhHHHHHHhhcCCCCcceeeeeeeccccC------CcccceeEEe
Confidence 5532222211111 223445555567777777888888888888754444 3556677666
Q ss_pred HHHHhHHHhhhhhhheecccc---chh-hhhHHHHHHHHHHHHHHhcCceee
Q 008355 188 SINIGALVASSVLVWIQMNVG---WGW-GFGIPAVAMAIAVVFFFSGSRLYR 235 (568)
Q Consensus 188 ~~~ig~~~~p~~~~~i~~~~g---~~~-~f~~~~~~~~~~~~~~~~~~~~~~ 235 (568)
..++-+.+=..+-+...+..+ |.. .-+.......+...+..+.++.++
T Consensus 403 ~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~ 454 (480)
T KOG2563|consen 403 SGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYR 454 (480)
T ss_pred ehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHH
Confidence 666666665566666666655 333 223333344444444445555443
No 255
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.04 E-value=0.0055 Score=48.23 Aligned_cols=68 Identities=12% Similarity=-0.007 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHh
Q 008355 47 GMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLT 116 (568)
Q Consensus 47 ~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~ 116 (568)
..++.+| .++++.++|..+.|++.+...+++.++.+...++.++. .+++.+..+.+...+.++.+++.
T Consensus 10 ayTplLP-~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~-~~~~~~~~~l~~~~~~~~~ma~~ 77 (85)
T PF06779_consen 10 AYTPLLP-LMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHS-RPRRLLRAGLLLTVLSTAAMALT 77 (85)
T ss_pred HHHhHhH-HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445444 68889999999999999999999999999999999997 88999999999999999999887
No 256
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=96.92 E-value=0.0064 Score=61.24 Aligned_cols=143 Identities=10% Similarity=0.090 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCc-hHHHHHHHHHHHHHHHHHHHh
Q 008355 38 ECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGR-FWTIASFSIIYCLGMTLLTLT 116 (568)
Q Consensus 38 ~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Gr-k~~~~~~~~~~~i~~~~~~~~ 116 (568)
.++....+.+.....+.+..+.+|+++.+.|-+.+...+...+.+..-+...||..|. +-.+..+++.+.-..++...+
T Consensus 270 ~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~ 349 (451)
T KOG2615|consen 270 YFLYLELFSGLENTVLFLTHGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLA 349 (451)
T ss_pred HHHHHHHHHHHHhhHHHhhcCccCCChhhheeeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhcc
Confidence 3333333333333334333567999999999999888888888888888888888444 334444444444444455554
Q ss_pred hhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHh
Q 008355 117 ASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVA 196 (568)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~ 196 (568)
.....++++..+-.+..+...++...++....|.++ ||.+.|+......++-.+|
T Consensus 350 -------------------~~~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~q------rG~~~Gi~~Sl~alaRaiG 404 (451)
T KOG2615|consen 350 -------------------RTPVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQ------RGTLNGIFRSLGALARAIG 404 (451)
T ss_pred -------------------ccchhhhHHHHHHHHHHHHhhHHHHHHHHhcCCccc------chHHHHHHHHHHHHHHHhh
Confidence 235668888888899999999999999999999998 9999999999999999999
Q ss_pred hhhhhheec
Q 008355 197 SSVLVWIQM 205 (568)
Q Consensus 197 p~~~~~i~~ 205 (568)
|+++|.+..
T Consensus 405 Plv~g~i~~ 413 (451)
T KOG2615|consen 405 PLVSGVIFS 413 (451)
T ss_pred hhhhheeEE
Confidence 999988765
No 257
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=96.80 E-value=0.013 Score=63.89 Aligned_cols=113 Identities=16% Similarity=0.265 Sum_probs=86.5
Q ss_pred hhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhh
Q 008355 392 IVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFI 471 (568)
Q Consensus 392 ~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~ 471 (568)
..++.+|.+|| ..+..++++..++-+..+... +++..++.=++.|++......
T Consensus 138 ~g~lsD~~GRk-------~~~~~~~~~~~i~~~~~a~a~--------------------~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 138 FGPLSDRFGRK-------PVLLVSLLLFIIFGILTAFAP--------------------NYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred heehHhhcccH-------HHHHHHHHHHHHHHHHHHHhC--------------------cHHHHHHHHHHHHhhccchhH
Confidence 34466664443 467777777777766555443 777888888999999999999
Q ss_pred hhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHH
Q 008355 472 GQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLV 550 (568)
Q Consensus 472 ~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~ 550 (568)
..+.+..|..+++.|+.+..+ ......++.+++.+.+++.. +| +..+++..+.+++.++.
T Consensus 191 ~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--------~W----------r~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 191 VGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--------DW----------RWLFWIISIPSGLFLLL 250 (521)
T ss_pred HhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--------hH----------HHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 87888888888888887764 45 45667766666666554
No 258
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=96.79 E-value=0.011 Score=62.22 Aligned_cols=157 Identities=16% Similarity=0.148 Sum_probs=99.3
Q ss_pred hccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeeh
Q 008355 373 LSLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTI 452 (568)
Q Consensus 373 ~~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (568)
+.+...++..+..|..+. ...|. .+..+.+..|.+++.++.+++..++.. .....
T Consensus 76 viaa~slg~~i~~liF~~----Ws~k~------~~~k~Pli~s~ii~~~g~llY~~l~~~---------------~~~~~ 130 (488)
T KOG2325|consen 76 VIAASSLGHAIFSLIFGI----WSNKT------GSVKKPLIVSFLIAIIGNLLYLALAYV---------------PNGVK 130 (488)
T ss_pred HHHHHHHHHHhcchhhcc----ccccc------CCcccCHHHHHHHHHHHHHHHHHHHhc---------------ccchH
Confidence 334455666666666554 22222 122456889999999998888666532 11145
Q ss_pred hhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccch
Q 008355 453 FWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGH 532 (568)
Q Consensus 453 ~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~ 532 (568)
+++....++.|+|.+.... .-.|+++..-.+.|.++++..+....+|.++||.+...+......+. .+.+. ..-+.
T Consensus 131 y~mL~~R~l~Gvg~~n~a~-lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~--~i~~~-~~~n~ 206 (488)
T KOG2325|consen 131 YLMLVARILTGVGVGNFAV-LRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGF--MILPG-LIFNM 206 (488)
T ss_pred HHHHHHHHHcCcCcccHHH-HHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCce--EEcCc-ceEEe
Confidence 6677778888888765444 57888887777778888887777777888888777766544322111 22232 23333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhc
Q 008355 533 LDYFYWLLTILSVLNFLVYLWIAKWF 558 (568)
Q Consensus 533 ~~~~f~~~a~~~~v~~v~~~~~~~~~ 558 (568)
|...-|+.+.+.++..++..+..+|.
T Consensus 207 YTap~w~m~i~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 207 YTAPAWLMAILWIIYIVIILFFFKEV 232 (488)
T ss_pred cchHHHHHHHHHHHHHHHHHhheeec
Confidence 44445777888888887777777654
No 259
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.67 E-value=0.0042 Score=65.84 Aligned_cols=128 Identities=18% Similarity=0.179 Sum_probs=108.1
Q ss_pred HHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHH-HHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC
Q 008355 51 NLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGA-FLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKD 129 (568)
Q Consensus 51 ~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G-~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 129 (568)
.++.|+...++++..+.+...+..+....+++++.. .+.-.+ |-|+.+..|+....+...+.+++
T Consensus 263 ~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l-~~~~~i~lGl~~~~~~~~~~af~------------- 328 (463)
T KOG2816|consen 263 VLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSIL-GEKRLISLGLLSEFLQLLLFAFA------------- 328 (463)
T ss_pred EEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhHhhHHHHHHHHHHHHHHHh-------------
Confidence 345778888999999999999999999999988887 666666 99999999999999999999988
Q ss_pred CCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheec
Q 008355 130 ACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQM 205 (568)
Q Consensus 130 ~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~ 205 (568)
.+.++++....+.++ .+...|...++++.+.++++ +|+.+++....-.+.++++|.+-+.+..
T Consensus 329 ------~~~w~~~~~~v~~~~-~~~~~pa~~s~~s~~v~~~e------~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 329 ------TETWMMFAAGVVVAL-AGIVFPAIRAFASILVSPEE------QGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred ------ccchhhhHHHHHHHh-hcchhHHHHhHHHhhccccc------ccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 456767777655544 45677899999999999999 9999999999999999999998876643
No 260
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.51 E-value=0.00065 Score=73.67 Aligned_cols=173 Identities=14% Similarity=0.130 Sum_probs=0.0
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHH-HHHhhhhhHHHHhhhc-cCchHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSG-TCYITPLIGAFLADSY-MGRFWTIASFSIIY 106 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~-~~~i~~~~~G~laDr~-~Grk~~~~~~~~~~ 106 (568)
+......+....+.+..-++.+++|-|++.++++++.++.++.++..+ +..++.+++|++..|+ ++.|+++....+..
T Consensus 305 p~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~ 384 (539)
T PF03137_consen 305 PVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVS 384 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHH
Confidence 455677788888888899999999999999999999999999887655 6668899999999998 33455544443333
Q ss_pred HHHHHHHH---H--------h-hhccC-----------CCCCCC-----------CCCCCCC-CchhHHHHHHHHHHHhh
Q 008355 107 CLGMTLLT---L--------T-ASVSG-----------LKPSCD-----------KDACHPT-GAQTAVTFVALYLIALG 151 (568)
Q Consensus 107 ~i~~~~~~---~--------~-~~~~~-----------~~~~~~-----------~~~~~~~-~~~~~~~~~~~~l~g~g 151 (568)
.+..+... + + -..+. ....|. ...|+.+ ..+...+++..++..+.
T Consensus 385 ~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~ 464 (539)
T PF03137_consen 385 IVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFF 464 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHH
Confidence 33322210 0 0 00011 000110 1123332 34555666666665555
Q ss_pred cccCcccccccccccCCCCCchhhhhhhhhhhhHHH-HHHHhHHHhhhhhhheeccc
Q 008355 152 TGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYL-SINIGALVASSVLVWIQMNV 207 (568)
Q Consensus 152 ~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~-~~~ig~~~~p~~~~~i~~~~ 207 (568)
.+..........-+.+|+++ |..+.|+..+ .--+|.+=||++.|.+.|..
T Consensus 465 ~~~~~~p~~~i~LR~V~~~~------rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 465 TFMSQVPSTLITLRCVPPEQ------RSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ---------------------------------------------------------
T ss_pred HHhcccchheeeeccCChhh------cchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 55555555566668889888 9999999554 55778899999999998853
No 261
>PRK03612 spermidine synthase; Provisional
Probab=96.28 E-value=0.079 Score=57.39 Aligned_cols=173 Identities=14% Similarity=0.081 Sum_probs=95.9
Q ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHH-HHHHH-HHHHH
Q 008355 34 ILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIAS-FSIIY-CLGMT 111 (568)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~-~~~~~-~i~~~ 111 (568)
+.+..++..++-.+.-..+.-.+...+|-+....+.+++++..+..++..++|+++++. -|+....- +..+. .+...
T Consensus 19 l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~-~~~~~~~e~~i~l~~~~~~~ 97 (521)
T PRK03612 19 LLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDA-AAGFVAVELLLALLGGLSAL 97 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHHH
Confidence 34444455555555555566666677898999999999999999999999999887544 23322111 11111 11111
Q ss_pred HHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHH
Q 008355 112 LLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINI 191 (568)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~i 191 (568)
+......... .....++...++.++-.|+..|....+..+... ++ -++..|-.|....+
T Consensus 98 ll~~~~~~~~--------------~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~------~g~~~g~ly~~ntl 156 (521)
T PRK03612 98 ILYAAFAFQG--------------LSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRD-QH------LGHNVATVLAADYL 156 (521)
T ss_pred HHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc------hhhhhhhhHhHHhH
Confidence 1111100000 011223334445677777777666655544222 12 35567777888888
Q ss_pred hHHHhhhhhhheec-cccch-hhhhHHHHHHHHHHHHHH
Q 008355 192 GALVASSVLVWIQM-NVGWG-WGFGIPAVAMAIAVVFFF 228 (568)
Q Consensus 192 g~~~~p~~~~~i~~-~~g~~-~~f~~~~~~~~~~~~~~~ 228 (568)
|+++|.++.+++.- ..|-. ..+.++.+..++++++.+
T Consensus 157 Ga~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~~~ 195 (521)
T PRK03612 157 GALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVFLW 195 (521)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99888888876554 56744 434433333344433333
No 262
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.97 E-value=0.047 Score=56.60 Aligned_cols=125 Identities=14% Similarity=0.092 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChh---hH
Q 008355 410 QRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDA---MR 486 (568)
Q Consensus 410 ~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~---~r 486 (568)
+.+.+|.++..+|.+++.+.... +......+...+.+++.+.++|.++.=|....+..|+.+++ .|
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~-----------~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~ 70 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIP-----------PSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRR 70 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTS-----------SSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhc-----------chhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhh
Confidence 35778888888888875554421 00011234456778888999999999999999999999977 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhhceec
Q 008355 487 SLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKWFTYK 561 (568)
Q Consensus 487 g~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~~~~~ 561 (568)
......+....++|..++..+.+++.+.. +| ...|.+.++..+++.+.++.-.++++++
T Consensus 71 ~~~F~~fY~~in~G~~~~~~~~~~i~~~~------~~----------~~~f~i~~~~~~~~~~~f~~~~~~y~~~ 129 (372)
T PF00854_consen 71 DSFFNWFYWGINIGSLFSPTLVPYIQQNY------GW----------FLGFGIPAIGMLLALIVFLSGRKRYRKV 129 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHHHHCS-------H----------HHHHHHHHHHHHHHHHHHHCCCCTT--S
T ss_pred hhhHHHHHHHHhhhhHhhcccchhhcccc------ch----------hhhhhHHHHHHHHHHHHHHhCCcCCcCc
Confidence 55556677888899999888888876432 33 4567777777777777666655555554
No 263
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.81 E-value=0.062 Score=59.33 Aligned_cols=171 Identities=12% Similarity=0.089 Sum_probs=112.0
Q ss_pred ceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHH-HHHhhhhhHHHHhhhc-cCchHHHHHHHHHH
Q 008355 29 KACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSG-TCYITPLIGAFLADSY-MGRFWTIASFSIIY 106 (568)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~-~~~i~~~~~G~laDr~-~Grk~~~~~~~~~~ 106 (568)
+.....++...++...+-++.+++|-|+.+++|.+.+.+..+.+...+ +..++..++|++.-|+ ++.|.+.....+..
T Consensus 392 ~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~ 471 (735)
T KOG3626|consen 392 PIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCS 471 (735)
T ss_pred chHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHH
Confidence 456677788999999999999999999999999999999999876644 5558899999999988 23344444333332
Q ss_pred HHHHHH---HHHh--h------------hccCCCC------------CCCC-----------------------------
Q 008355 107 CLGMTL---LTLT--A------------SVSGLKP------------SCDK----------------------------- 128 (568)
Q Consensus 107 ~i~~~~---~~~~--~------------~~~~~~~------------~~~~----------------------------- 128 (568)
.+..+. ..+. . ..|.... +||.
T Consensus 472 ~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~ 551 (735)
T KOG3626|consen 472 VLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTS 551 (735)
T ss_pred HHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCC
Confidence 222222 1110 0 0011111 1221
Q ss_pred ------------C------------CCCCC-CchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhh
Q 008355 129 ------------D------------ACHPT-GAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFN 183 (568)
Q Consensus 129 ------------~------------~~~~~-~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 183 (568)
+ -|+.+ ...+..+++..++..+-.+...+....++-+.+++++ |..++|
T Consensus 552 ~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~------ks~AlG 625 (735)
T KOG3626|consen 552 DGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEE------KSFALG 625 (735)
T ss_pred CCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchh------chhhhH
Confidence 0 02221 2233444444444555555666677778889999998 999999
Q ss_pred hHHH-HHHHhHHHhhhhhhheec
Q 008355 184 WFYL-SINIGALVASSVLVWIQM 205 (568)
Q Consensus 184 ~~~~-~~~ig~~~~p~~~~~i~~ 205 (568)
+..+ ..-+|.+-+|++.|++.|
T Consensus 626 ~~~~~irllg~IPsPIifG~~ID 648 (735)
T KOG3626|consen 626 FQWMLIRLLGFIPSPIIFGAVID 648 (735)
T ss_pred HHHHHHHHHhcCCchHhhhhhHh
Confidence 9555 457788889999999976
No 264
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.43 E-value=3.2 Score=43.99 Aligned_cols=61 Identities=13% Similarity=0.130 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 008355 454 WQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKV 514 (568)
Q Consensus 454 ~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~ 514 (568)
.++...++..+.....+.+..++-++++.+..-|++|-+.|+..++|+---..++-.+.|.
T Consensus 407 lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 407 LVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 4555677788888888999999999999999999999999999999887766666555544
No 265
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=95.40 E-value=0.15 Score=49.32 Aligned_cols=92 Identities=11% Similarity=0.080 Sum_probs=64.2
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhh
Q 008355 406 FTQLQRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAM 485 (568)
Q Consensus 406 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~ 485 (568)
.+++..+.+|.+...+++.........+ ....+.|.+....++.+.+....+.+......+-+|+ .
T Consensus 63 ~gp~~~l~iG~~~~~~GY~~~~l~~~~~-------------i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~ 128 (250)
T PF06813_consen 63 FGPWVVLLIGAVLGFVGYGLLWLAVSGR-------------IPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-S 128 (250)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhCc-------------cCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-c
Confidence 5666778899999999988776654220 1113455555555566667666667777777788985 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008355 486 RSLCSALSLTTVAVGNYLSTLLVTIV 511 (568)
Q Consensus 486 rg~~~g~~~~~~~lg~~lg~~l~~~i 511 (568)
||++.|+.....++++.+-+.+...+
T Consensus 129 RG~vvgilk~~~GLSaai~t~i~~~~ 154 (250)
T PF06813_consen 129 RGTVVGILKGFFGLSAAIFTQIYSAF 154 (250)
T ss_pred cCceehhhhHHHHhHHHHHHHHHHHH
Confidence 99999999999898886665554433
No 266
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=95.24 E-value=0.28 Score=51.54 Aligned_cols=154 Identities=8% Similarity=-0.012 Sum_probs=110.7
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHH
Q 008355 32 RFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMT 111 (568)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~ 111 (568)
+...+.-.+-+++.-+.-..+..|+..+ |++...+|..=+...+....+.....++.+|+ |..|.=..+.....+...
T Consensus 261 flas~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~ri-Glvr~G~~~l~~q~~~L~ 338 (432)
T PF06963_consen 261 FLASFALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRI-GLVRAGLWSLWWQWVCLA 338 (432)
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cchhhHHHHHHHHHHHHH
Confidence 3333333333333333444567888865 99999999999999999999999999999999 998888888776555554
Q ss_pred HHHHhhhccCCCCCCCCCCCCC-CCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHH
Q 008355 112 LLTLTASVSGLKPSCDKDACHP-TGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSIN 190 (568)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ 190 (568)
++..+-..|.- + ...+...++.+.++.-+|-=++--+..-++-|..|+++ |+...|..+...+
T Consensus 339 ~~v~~~~~~~~----------~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~------Rg~v~gvq~sl~~ 402 (432)
T PF06963_consen 339 LCVVSFWAPGS----------PFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESE------RGAVSGVQNSLQS 402 (432)
T ss_pred HHHHHHhcCCC----------CchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHH------hhHHHHHHHHHHH
Confidence 44433222220 0 12345667777777777777777788888999999888 9999999988889
Q ss_pred HhHHHhhhhhhhe
Q 008355 191 IGALVASSVLVWI 203 (568)
Q Consensus 191 ig~~~~p~~~~~i 203 (568)
+.-++-..++-.+
T Consensus 403 lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 403 LFELLSFVLTIIF 415 (432)
T ss_pred HHHHHHHHHHhcc
Confidence 8888876655433
No 267
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=95.21 E-value=0.17 Score=53.71 Aligned_cols=115 Identities=17% Similarity=0.222 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccC---ChhhH
Q 008355 410 QRMGIGLLISIFSMVAAGILEVVRLNIVKRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQA---PDAMR 486 (568)
Q Consensus 410 ~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~---P~~~r 486 (568)
.-+.++.++.+++.+.++..... ..+.......+++..+|..+.....-+.+.|.. |.+ |
T Consensus 60 ~Y~~i~~~~~~~~~~~~~~~~~~----------------~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~ 122 (433)
T PF03092_consen 60 PYMIIGWLLGAVSALVLALLPAS----------------ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPES-R 122 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhcccc----------------cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-h
Confidence 45677777776666655544311 123334455566677888888877777777766 344 7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhhh
Q 008355 487 SLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAKW 557 (568)
Q Consensus 487 g~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~~ 557 (568)
|..++.......+|+.++..+.|.+.+... .+..|.+.+.+.++..+..+++.+|
T Consensus 123 g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~----------------~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 123 GDLQSFVWGVRSVGSLVGSLLSGPLLDSFG----------------PQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhcCC----------------CeEEehHHHHHHHHHHHHHHHhhhh
Confidence 888999999999999999999987755321 1234667677777776666666665
No 268
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=95.20 E-value=5.1 Score=42.37 Aligned_cols=161 Identities=14% Similarity=0.017 Sum_probs=98.2
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCC---hhhhhhhHHHHHH-HHHhhhhhHHHHhhhccCchHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQG---NVTASNNVTNWSG-TCYITPLIGAFLADSYMGRFWTIASFS 103 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s---~~~~g~~~~~~~~-~~~i~~~~~G~laDr~~Grk~~~~~~~ 103 (568)
++.++.+.+..++..+.++.+.. +++.+.++ +..+.++-...-. ++.+..++-+++.+++ .|.+++.+..
T Consensus 26 ~~kflpl~Ll~f~I~~ny~~lR~-----lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~l-t~~~vF~~~~ 99 (509)
T COG3202 26 LKKFLPLALLFFCILFNYNLLRS-----LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNIL-TREKVFYIIL 99 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-----hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhc-CHHHHHHHHH
Confidence 44556666666666666544332 34444333 4445555555555 6678888899999999 9999999888
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCC--------CCCc-h---------hHHHHHHHHHHH-hhcccCccccccccc
Q 008355 104 IIYCLGMTLLTLTASVSGLKPSCDKDACH--------PTGA-Q---------TAVTFVALYLIA-LGTGGIKPCVSSFGA 164 (568)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~---------~~~~~~~~~l~g-~g~g~~~~~~~~~~~ 164 (568)
..+....+++++.- .|. +|.-|.+ ...+ + -|..-+.-++.- .|.=...-.-..+..
T Consensus 100 ~~F~~fF~LFa~Vi-~P~----~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faN 174 (509)
T COG3202 100 GFFLGFFALFAFVI-YPY----KDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFAN 174 (509)
T ss_pred HHHHHHHHHHHHHH-hcc----ccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888761 232 2222211 0011 1 011111111111 111111113457778
Q ss_pred ccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheec
Q 008355 165 DQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQM 205 (568)
Q Consensus 165 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~ 205 (568)
|.+..+| -.|.+++++.+.|++..++..+..++.+
T Consensus 175 eitt~~e------akRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 175 EITTIEE------AKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HhhhHHH------hhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 8888887 8899999999999999999988888765
No 269
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=95.19 E-value=0.14 Score=53.76 Aligned_cols=180 Identities=18% Similarity=0.067 Sum_probs=113.5
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCC----hhhhhhhHHHHHHHHHhhhhhHHHHhhhccCch-------HHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQG----NVTASNNVTNWSGTCYITPLIGAFLADSYMGRF-------WTI 99 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s----~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk-------~~~ 99 (568)
...+++...+....+--..+.+..|.++..+-+ ....++..+.-.+.-.+..|+..++--|. +++ .=+
T Consensus 286 ~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l-~~~~~~ps~~~KF 364 (498)
T COG3104 286 AIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKL-GRGNKQPSTPIKF 364 (498)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHh-hcCCCCCCcchHH
Confidence 344444444444444445556677766543222 12345666666777777788887887775 443 123
Q ss_pred HHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhh
Q 008355 100 ASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKS 179 (568)
Q Consensus 100 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~ 179 (568)
-+|+.++..+.+++........ ......+.+.++...+++++|.=.+.|+..++++...|+.- .+
T Consensus 365 alGl~l~g~~fl~l~~~~~~~~---------~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~------~s 429 (498)
T COG3104 365 ALGLILAGLGFLILLLAGIWFG---------GPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPAL------KS 429 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhhc---------CCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHH------HH
Confidence 4555666666665554411000 00122567889999999999999999999999999999987 89
Q ss_pred hhhhhHHHHHHHhHHHhhhhhhh------eeccccchhhhhHHHHHHHHHHHH
Q 008355 180 SFFNWFYLSINIGALVASSVLVW------IQMNVGWGWGFGIPAVAMAIAVVF 226 (568)
Q Consensus 180 ~~~~~~~~~~~ig~~~~p~~~~~------i~~~~g~~~~f~~~~~~~~~~~~~ 226 (568)
..++.+-+....|..++..+.+. ..+.......|+..++..++....
T Consensus 430 ~~ma~wfLt~a~~~~l~g~va~~~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~ 482 (498)
T COG3104 430 FIMAMWFLTVAAGQTLGGQVAGLTAVTDPAYTAFIEGRVFGTIGVVAIVIGIL 482 (498)
T ss_pred HHHHHHHHHHHHHHHhhceecccccccchhhhhhhhhhhHHHHHHHHHHHHHH
Confidence 99999999998888888776663 222334555566555444433333
No 270
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=94.73 E-value=1.9 Score=48.04 Aligned_cols=313 Identities=11% Similarity=0.004 Sum_probs=174.2
Q ss_pred hhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHH
Q 008355 64 NVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFV 143 (568)
Q Consensus 64 ~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (568)
.........++.....+..+.....+|-.-|+-..+..-.+...+..+...+. +++. .+.........+
T Consensus 19 g~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~ll-ai~a----------~~~~~~~~~~~~ 87 (654)
T TIGR00926 19 GFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALL-SFGA----------IPSSGHPLHDLL 87 (654)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH-Hhcc----------CcccccchHHHH
Confidence 33445566777788888888888889988445555555555555555555544 1121 001111234456
Q ss_pred HHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheecccc-chh------hhh-H
Q 008355 144 ALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVG-WGW------GFG-I 215 (568)
Q Consensus 144 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g-~~~------~f~-~ 215 (568)
..+.+.++.++..+..+++.++..+..++ ..+.+..+.+++..+.+.+. ..++..+..... +.. .|. .
T Consensus 88 ~l~gLaLia~G~GgiKp~vsaf~gdqf~~---~~~~~~~s~F~~fY~~iNiG-Slis~~i~~~l~~~~~~fg~~~~~~~a 163 (654)
T TIGR00926 88 DLLGLALIALGTGGIKPCVSAFGGDQFEE---RQLSLRSRFFSFFYFAINAG-SLISTIITPILRGDVGCFGCQDCYPLA 163 (654)
T ss_pred HHHHHHHHHhhccccccCchhhhHhhcCc---cchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcccccCcchHHH
Confidence 76778899999999999999999887652 33446788899998877775 565666655443 321 232 2
Q ss_pred HHHHHHHHHHHHHhcCceeeecCCCCChhHHHHHHHHHHHhhcccccCCcchhhhhhhhhhhhhccCccccCCccchhhh
Q 008355 216 PAVAMAIAVVFFFSGSRLYRIQKPGGSPLTRIMQVIVASFRKSNVVVPADKSLLYETADEECNIQGSRKLESTSKFKFFD 295 (568)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~ 295 (568)
.++..++.++.+.......+..++.+.......++........+ .+ +
T Consensus 164 F~i~~i~m~ia~lvf~~g~k~y~~~~p~gs~l~~v~~vi~~a~~-----------------------~~--------~-- 210 (654)
T TIGR00926 164 FGVPAILMILALIVFMAGSKMYKKKPPKGNIVSKVIKCIVTALR-----------------------KR--------F-- 210 (654)
T ss_pred HHHHHHHHHHHHHHHHHhccccCCCCCCccHHHHHHHHHHHHHH-----------------------Hh--------h--
Confidence 33334444444444444333333332222222222111111000 00 0
Q ss_pred hhhhhccccccCCCCCCCcccc--hhhHHHHHHHHHHHHHHHhhhHHHhhhccccceeEeecccccCCCCCCcccCchhh
Q 008355 296 KAAVETQTDRVKGSADPWRLCT--VTQVEELKAIIRLLPVWASGIVFATVYSQMSTMFVLQGNTMDQHMGPNFKIPSASL 373 (568)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (568)
..........|.+.. +...++.+...+.+.++.....+++.+.++......+..+.....+ .....+...
T Consensus 211 -------~~~~~~~~~~~ld~a~~~~~~~~V~evkrll~il~l~i~~~ifw~~~~Q~~s~~~~qa~~m~~-~l~g~~ip~ 282 (654)
T TIGR00926 211 -------STRSEHWPLHWLDYAKDKHDIRMIRSTKRLLRVLVLFIPLPMFWALFDQQGSRWTLQATRMDG-DVGGFEIQP 282 (654)
T ss_pred -------ccCCcccchhHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHhcC-ccCCEecCH
Confidence 000000001121111 1112335566677777777777777777755545444444444322 222223334
Q ss_pred ccccchhhhhhhhhhhhhhhhhhhhhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008355 374 SLFDTLSVIFWAPIYDIVIVPFARKLTGHERGFTQLQRMGIGLLISIFSMVAAGILEVVRLN 435 (568)
Q Consensus 374 ~~~~~~~~i~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~ 435 (568)
..++.+-.++..++...+..++.+++.++ ..+...+.-+.+.+.++.+.+..+......
T Consensus 283 ~~lq~~n~L~IIil~Pi~~~~lyp~l~~~---~~~ls~l~k~~iG~~la~la~~va~~ve~~ 341 (654)
T TIGR00926 283 DQMQVVNPLLILIFVPIFDYIVYPAIAKC---GTRFTSLRKMAVGGLLAALSFFVAALVQLK 341 (654)
T ss_pred HHHHHHHHHHHHHhHHHHHHhHHHHHHhc---CCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666677777777777666778877554 556778889999999999888888866666
No 271
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.31 E-value=0.66 Score=41.42 Aligned_cols=61 Identities=7% Similarity=0.139 Sum_probs=53.5
Q ss_pred ehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 008355 451 TIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIV 511 (568)
Q Consensus 451 ~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i 511 (568)
+.+.+++.-++.|++.+...++.-.++.+...++.+++-.+++....+.+.++|.++.-.+
T Consensus 88 ~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 88 NSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred hHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788889999999999999999999999999999999999999999988887776544
No 272
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=93.13 E-value=1.6 Score=43.16 Aligned_cols=59 Identities=12% Similarity=0.218 Sum_probs=44.2
Q ss_pred ehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008355 451 TIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVT 509 (568)
Q Consensus 451 ~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~ 509 (568)
+++.+...+++-|+-.+..+...+--+.+..+++.|-.+++...+.-.+|..+++.+.-
T Consensus 341 si~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lal 399 (409)
T KOG3880|consen 341 SIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLAL 399 (409)
T ss_pred HHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhc
Confidence 55555555666677667677666777888888999999999998888888877766654
No 273
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=92.69 E-value=0.19 Score=52.12 Aligned_cols=180 Identities=10% Similarity=-0.034 Sum_probs=100.1
Q ss_pred cCCCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHH-hCCCh----------------hhhhhhHHHHHHHHHhhhhhHH
Q 008355 24 KTGNWKACRFILGNECCERLAYYGMSTNLVNYLQKQ-LNQGN----------------VTASNNVTNWSGTCYITPLIGA 86 (568)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~-lg~s~----------------~~~g~~~~~~~~~~~i~~~~~G 86 (568)
.+.++|.++.++...++...+.....-+-+.++-++ ++-++ ..-.|-+...++...+.+...-
T Consensus 274 ~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~ 353 (498)
T KOG0637|consen 274 LKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVE 353 (498)
T ss_pred HhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHH
Confidence 345688999999999999999887777777777443 22221 1123445667888889999999
Q ss_pred HHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCC--CCCCCCCCCCCchhHHHHHHHHHHHhhcccCccccccccc
Q 008355 87 FLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKP--SCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGA 164 (568)
Q Consensus 87 ~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~ 164 (568)
++.||+ |-|+.++.+...+.++..+.++...+..... +..+........-.......-...++-.+....+..+..+
T Consensus 354 ~l~~~~-g~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s 432 (498)
T KOG0637|consen 354 KLSRKF-GTRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIPLAITFSIPFALAS 432 (498)
T ss_pred HHHHhc-CcceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCcccccccccccccc
Confidence 999999 8666666666656666665554311000000 0000000000111111112122223333333222223222
Q ss_pred ccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheecccc
Q 008355 165 DQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVG 208 (568)
Q Consensus 165 ~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g 208 (568)
........ .+|...|+.+..+.+-.++.....|.+.+.+|
T Consensus 433 ~~~~~sg~----g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G 472 (498)
T KOG0637|consen 433 IEIGNSGL----GQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFG 472 (498)
T ss_pred ccccCccC----CCCceeeeeeeeeeehhheeeccccchhhhcC
Confidence 22222221 15666677888999999888887787777665
No 274
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=92.43 E-value=1.5 Score=43.68 Aligned_cols=119 Identities=16% Similarity=0.075 Sum_probs=69.4
Q ss_pred CCCcceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHH
Q 008355 25 TGNWKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSI 104 (568)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~ 104 (568)
+..-|+++.+-..-++...+|-+ ..++.... +.+..+.. .+.....-...+++.+.+..++ |-|.++.++..
T Consensus 25 ~~~~knv~i~s~~fl~~f~a~~g-l~nlq~~v----n~~lg~~s--l~~~y~~l~~s~m~~~~~Ir~~-g~K~tm~lav~ 96 (390)
T KOG3097|consen 25 LGILKNVLILSIAFLLTFTAYLG-LQNLQTSV----NYDLGTVS--LGALYLSLIDSSMFMPLLIRFL-GTKWTMVLAVF 96 (390)
T ss_pred cchhhhhhHHHHHHHHHHHHHHH-HHHHHHHH----hcCcccch--hhhhhHHHHHHHHHHHHHHHHH-hhHHHHHHHHH
Confidence 34456666665554544444433 33344333 33322222 1223334444555555677776 99999988766
Q ss_pred HHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCC
Q 008355 105 IYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETD 171 (568)
Q Consensus 105 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~ 171 (568)
.+.......-. ..+..++..-...|+|.+.++.+-.++++++-+.+.
T Consensus 97 ~Y~lyiA~Nl~--------------------pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya 143 (390)
T KOG3097|consen 97 PYALYIAANLE--------------------PRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYA 143 (390)
T ss_pred HHHHHHHhhcc--------------------hhHHhhccHHHhhccccccccccCcceecHHHHHHH
Confidence 55543322211 235556777788899999999999999888765543
No 275
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=92.24 E-value=0.32 Score=50.38 Aligned_cols=61 Identities=15% Similarity=0.091 Sum_probs=52.0
Q ss_pred hhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhhe
Q 008355 137 QTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWI 203 (568)
Q Consensus 137 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i 203 (568)
+.+.+++..+..|+..|.........+.|..|+++ |..+++...++-++|-.++..++-++
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~------REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPED------REFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHH------HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46777777788899999999999888999888877 99999999999999999988876554
No 276
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=91.56 E-value=0.99 Score=45.34 Aligned_cols=153 Identities=14% Similarity=0.054 Sum_probs=82.5
Q ss_pred HHHHHHHH-HHhCCChhhhh-hhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCC
Q 008355 50 TNLVNYLQ-KQLNQGNVTAS-NNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCD 127 (568)
Q Consensus 50 ~~l~~yl~-~~lg~s~~~~g-~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 127 (568)
+++.+|+. .+.+++..+.. -+.-...-...+.-++.=.+.|-. ..|++++.-.+...+.-.++-+..++..
T Consensus 25 P~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~l-rYKPvivlq~ls~v~~w~~lv~g~sV~~------ 97 (433)
T KOG3810|consen 25 PYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYL-RYKPVVVLQALSGVPVWIMLVFGPSVKA------ 97 (433)
T ss_pred CccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhh-hcceeeeeeccchhHHHHHHHhcCCchh------
Confidence 35566665 44566655433 222222333344444445689988 7777777655544454555555533322
Q ss_pred CCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccc
Q 008355 128 KDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNV 207 (568)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~ 207 (568)
+-+.-+..|...+.. .+.++++-...++++ +.++.+....+.-.|-..|..++-.+....
T Consensus 98 -------------mQvlE~FyG~~tAaE-IAYysYIYs~Vd~~~------Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~ 157 (433)
T KOG3810|consen 98 -------------MQVLEFFYGPATAAE-IAYYSYIYSKVDPEM------YKRVTGYCRAAFLVGKFVGSVLAQLLVSLE 157 (433)
T ss_pred -------------eeeehhhcChHHHHH-HhhhheeeeecCHHH------HHHHHHHhHHHHHHHhHHHhHHHHHHhhhc
Confidence 333333333333322 234555555566666 888888888888888888877766555432
Q ss_pred --cchhhhhHHHHHHHHHHHHHHh
Q 008355 208 --GWGWGFGIPAVAMAIAVVFFFS 229 (568)
Q Consensus 208 --g~~~~f~~~~~~~~~~~~~~~~ 229 (568)
++...=.++.....++.++..+
T Consensus 158 ~~sy~~LN~ISL~~~~ia~~~A~f 181 (433)
T KOG3810|consen 158 TLSYTTLNYISLAEVTIAVLLALF 181 (433)
T ss_pred ccchhhhchhhHHHHHHHHHHHhh
Confidence 3333334444444455544443
No 277
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=91.37 E-value=7.5 Score=41.75 Aligned_cols=164 Identities=12% Similarity=0.015 Sum_probs=89.4
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHh---CCChhhhhhhHHHH-HHHHHhhhhhHHHHhhhccCchHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQL---NQGNVTASNNVTNW-SGTCYITPLIGAFLADSYMGRFWTIASFS 103 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~l---g~s~~~~g~~~~~~-~~~~~i~~~~~G~laDr~~Grk~~~~~~~ 103 (568)
++.++.+.+.-++..+.|..+. -+++.+ ..++..+..+=... .-+..+...+-.+++|++ +|.+++.+..
T Consensus 23 ~~k~~~l~~m~f~i~f~y~~lR-----~~KD~lvvt~~gae~I~flK~~~vlP~a~~f~~~y~kl~n~~-s~~~lFy~~~ 96 (491)
T PF03219_consen 23 LKKFLPLALMFFFILFNYTILR-----DLKDTLVVTAQGAEVIPFLKVWGVLPVAILFTILYSKLSNRL-SREKLFYIII 96 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-----HhcCeEEEecCChhHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CHHHHHHHHH
Confidence 4445666666666555543222 122221 11223333332222 224456677789999999 9999998887
Q ss_pred HHHHHHHHHHHHhhhccCCCC-----CCCCCCCCCCCchh---------HHHHHHHHHHH-hhcccCcccccccccccCC
Q 008355 104 IIYCLGMTLLTLTASVSGLKP-----SCDKDACHPTGAQT---------AVTFVALYLIA-LGTGGIKPCVSSFGADQFD 168 (568)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---------~~~~~~~~l~g-~g~g~~~~~~~~~~~~~~~ 168 (568)
..+....+++++.- .|.-.. .+|++... ...+. |...+.-+..- .|.-...-.-+.+..|.++
T Consensus 97 ~~F~~fF~~f~~vl-yP~~~~lhp~~~~~~~~~~-~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt 174 (491)
T PF03219_consen 97 IPFLGFFALFAFVL-YPNRDILHPDAFADKLLAI-LPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITT 174 (491)
T ss_pred HHHHHHHHHHHHHH-hhchhhcCCCHHHHHhhhh-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 77777777666541 232000 00110000 00111 11111111111 1111111234788899999
Q ss_pred CCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheec
Q 008355 169 ETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQM 205 (568)
Q Consensus 169 ~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~ 205 (568)
.+| -.|.++++..+.|+|.+++..+..++.+
T Consensus 175 ~~e------AKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 175 VEE------AKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888 8899999999999999999988877766
No 278
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=90.16 E-value=2.2 Score=41.31 Aligned_cols=140 Identities=14% Similarity=0.135 Sum_probs=87.0
Q ss_pred hhhhHHHHHHHHHhhhhhHHHHhhhccCch--HHHHHHHHHHHHHHHHHHHhhhc-cCCCCCCCCCCCCCCCchhHHHHH
Q 008355 67 ASNNVTNWSGTCYITPLIGAFLADSYMGRF--WTIASFSIIYCLGMTLLTLTASV-SGLKPSCDKDACHPTGAQTAVTFV 143 (568)
Q Consensus 67 ~g~~~~~~~~~~~i~~~~~G~laDr~~Grk--~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 143 (568)
-|++.+.+..+.++++-+..++..|- ..| ..+.+..++......+..++.++ |+ -.++..-++
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s-~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~-------------kes~~~s~i 349 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRS-SPKVESYMQIVFLVSIAALLLPILTSSVSPS-------------KESPSESLI 349 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcC-CcccchHHHHHHHHHHHHHHHHHHHhccCCC-------------cCCchHHHH
Confidence 47777888888777777666666554 322 23334343333333332222211 21 123344466
Q ss_pred HHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhhhheeccccchhhhhHHHHHHHHH
Q 008355 144 ALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVLVWIQMNVGWGWGFGIPAVAMAIA 223 (568)
Q Consensus 144 ~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~~~~~~ 223 (568)
+..+.-.+.|.++|...-+=.+..|+++ |.+.++++..-.|+-..++-...-.=....+-|-.|-++.+...++
T Consensus 350 ~F~~~E~cvGlfwPSimkmRsqyIPEea------rstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a 423 (454)
T KOG4332|consen 350 GFCLFEACVGLFWPSIMKMRSQYIPEEA------RSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVA 423 (454)
T ss_pred HHHHHHHHHhhcchHHHHHHHhhCCHHH------HhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHH
Confidence 6677788899999999999999999988 9999999999988877765332111111245667787777666655
Q ss_pred HHH
Q 008355 224 VVF 226 (568)
Q Consensus 224 ~~~ 226 (568)
.++
T Consensus 424 ~i~ 426 (454)
T KOG4332|consen 424 SIL 426 (454)
T ss_pred HHH
Confidence 443
No 279
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=89.25 E-value=3.8 Score=43.36 Aligned_cols=109 Identities=19% Similarity=0.190 Sum_probs=72.4
Q ss_pred HHHHHHhhhhhHHHHhhhc--cCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCC---CCCC---CCchhHHHHHHH
Q 008355 74 WSGTCYITPLIGAFLADSY--MGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKD---ACHP---TGAQTAVTFVAL 145 (568)
Q Consensus 74 ~~~~~~i~~~~~G~laDr~--~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~ 145 (568)
...+..++..+.+.+++|. +||++.+.++..+..++.++.-+. .|. |+| +... ..++.....+.-
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~--~p~-----dap~~~t~~~~~~~~~~~~~~~ii~ 360 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLS--FPN-----DAPLRPTDSPPLLFTPSYYLALIIG 360 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhcc--ccc-----cCCCCCCcccccccccchhHHHHHH
Confidence 4444555556666666544 388999998888877777766554 343 332 1111 223444455556
Q ss_pred HHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHh
Q 008355 146 YLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVA 196 (568)
Q Consensus 146 ~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~ 196 (568)
++.|++-+......+.++++.+ +++ |..+++++..--.++..++
T Consensus 361 ~l~G~~D~~~~t~~~~ii~~~~-~~~------~~~~fsi~kfyq~~~s~v~ 404 (461)
T KOG3098|consen 361 FLLGFGDACFNTQRYVIIALLY-PDD------RAQAFSLFKFYQSVASCVA 404 (461)
T ss_pred HHHhhHHHHHHHHHHHHHHHHh-cCc------hHHHHHHHHHHHHHHHHHH
Confidence 7889999999999999999999 445 7888888777766666654
No 280
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=87.63 E-value=42 Score=35.62 Aligned_cols=59 Identities=15% Similarity=0.083 Sum_probs=49.4
Q ss_pred ehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 008355 451 TIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVT 509 (568)
Q Consensus 451 ~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~ 509 (568)
+-++.++..++.|+..+......+.+..+..+++.|..+..+..+...+|-.+|+.+.-
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556666888999999999889999999999999999999999888888888877643
No 281
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=86.45 E-value=1.2 Score=47.08 Aligned_cols=58 Identities=10% Similarity=0.163 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhhhh
Q 008355 137 QTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASSVL 200 (568)
Q Consensus 137 ~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~~~ 200 (568)
+-+..++..++.|+..|...+....+..+..++++ |..+-.+...+.++|-.+|..++
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e------~e~aG~~~~~~l~~Gl~~Gs~l~ 428 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHE------REVAGALMVIFLLVGLALGAVLS 428 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHH------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666677889999999999999998888888766 88888888888888888776643
No 282
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=86.17 E-value=52 Score=35.24 Aligned_cols=55 Identities=13% Similarity=-0.059 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHhh-hhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008355 459 YFIVGCAEVFTFI-GQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTK 513 (568)
Q Consensus 459 ~~l~g~~~~~~~~-~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~ 513 (568)
++...+-...+.. .-|.++.|....++-.+-.++.....++|..+++.+...+.+
T Consensus 135 Yv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 135 YVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333 789999999999999999999999999999999988887764
No 283
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=84.48 E-value=41 Score=34.29 Aligned_cols=63 Identities=13% Similarity=-0.010 Sum_probs=36.6
Q ss_pred ehhhHHHHHHHHHHHHHHHhhh-----hHHhhhccCChhhHHHHHHHHH-HHHHHHHHHHHHHHHHhhh
Q 008355 451 TIFWQVPQYFIVGCAEVFTFIG-----QLEFFYDQAPDAMRSLCSALSL-TTVAVGNYLSTLLVTIVTK 513 (568)
Q Consensus 451 ~~~~~i~~~~l~g~~~~~~~~~-----~~~~~~~~~P~~~rg~~~g~~~-~~~~lg~~lg~~l~~~i~~ 513 (568)
+...++..=++.|++-.+.+.+ ..+...+..|++..+...+... ..+.+-.++++.+.-.+.+
T Consensus 120 ~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~ 188 (354)
T PF05631_consen 120 NYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLAD 188 (354)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHH
Confidence 5667777777778777776654 2334456677776666655544 3344444444444444443
No 284
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=79.81 E-value=82 Score=32.83 Aligned_cols=57 Identities=14% Similarity=0.110 Sum_probs=45.6
Q ss_pred ehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHH
Q 008355 451 TIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLL 507 (568)
Q Consensus 451 ~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l 507 (568)
+-++.+....+.|+..+-.....+.+..+..|++.+-.+..+..+....|-.+|..+
T Consensus 342 ~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~ 398 (406)
T KOG1479|consen 342 SDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLL 398 (406)
T ss_pred CchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 445666777888998888888889999999999988888888887777777666554
No 285
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=76.89 E-value=69 Score=30.50 Aligned_cols=63 Identities=16% Similarity=0.113 Sum_probs=48.4
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhHHhhhccCCh-hhHHHHHHHHHH-HHHHHHHHHHHHHHHhhhh
Q 008355 452 IFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPD-AMRSLCSALSLT-TVAVGNYLSTLLVTIVTKV 514 (568)
Q Consensus 452 ~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~-~~rg~~~g~~~~-~~~lg~~lg~~l~~~i~~~ 514 (568)
.+.++......+++.+...+....+..+..|+ +.|+...+.... ...+|..+++.+.+.+...
T Consensus 94 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 94 LALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555557888888889999999999998 778988888887 5778888888776666543
No 286
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=75.20 E-value=95 Score=32.50 Aligned_cols=62 Identities=15% Similarity=0.253 Sum_probs=48.3
Q ss_pred ehhhHHHHHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 008355 451 TIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTK 513 (568)
Q Consensus 451 ~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~ 513 (568)
+.+.+-..-+++|++... ..+.++|++...|+++--++++......-+|..++..++..+..
T Consensus 93 sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS 154 (412)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555666666777777665 56678999999999999999998888888888888777776543
No 287
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=74.45 E-value=11 Score=30.81 Aligned_cols=41 Identities=10% Similarity=-0.048 Sum_probs=29.2
Q ss_pred HHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHH
Q 008355 71 VTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMT 111 (568)
Q Consensus 71 ~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~ 111 (568)
+++=.++..+.....||+.|||.|-++..++.+++...+..
T Consensus 48 lssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG 88 (116)
T COG5336 48 LSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAG 88 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 44455566666777899999999999988877665444433
No 288
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=71.51 E-value=8.1 Score=37.33 Aligned_cols=67 Identities=12% Similarity=-0.031 Sum_probs=54.5
Q ss_pred hhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHH---------hhhccCchHHHH
Q 008355 32 RFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFL---------ADSYMGRFWTIA 100 (568)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~l---------aDr~~Grk~~~~ 100 (568)
+.--.+.+.+..+.....+++..|+++ .|.++....++..+..+..++..++.|.+ -||+ |||+...
T Consensus 20 f~yGvGHmlNDitAScWFTYlllfltq-iglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~-G~~~~wh 95 (412)
T KOG4830|consen 20 FAYGVGHMLNDITASCWFTYLLLFLTQ-IGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRI-GRRMSWH 95 (412)
T ss_pred eeechhHHHhhHHHHHHHHHHHHHHHH-hcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhh-cceeeee
Confidence 445567888888888888999999875 78888888899999999999999998754 5788 9887543
No 289
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=69.90 E-value=1.3 Score=44.63 Aligned_cols=158 Identities=9% Similarity=0.009 Sum_probs=3.7
Q ss_pred cceehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhh----hhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHH
Q 008355 28 WKACRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTAS----NNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFS 103 (568)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g----~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~ 103 (568)
+|.+|..++..+...+....+.+-+..-.+.... +..... .....|.++-.+|+.+.++.-=+- .+++.+.+..
T Consensus 142 ~~~i~~~~~~i~~~f~vTl~~FP~it~~v~s~~~-~~~~~~f~pv~~fl~Fn~gD~iGR~l~~~~~~~~-~~~~~l~~~s 219 (309)
T PF01733_consen 142 LKKIWPYALSIFLVFFVTLSVFPGITSAVQSSNN-PDWSSYFVPVVLFLLFNLGDFIGRFLASWPRWPG-PSPRWLWILS 219 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhheeeeccceeeeeecccc-CCCccHHHHHHHHHHHHHHHHhcchhcceeEecc-cccccHHHHH
Confidence 3455555555555554444444444222222111 111111 234567888888888777642111 1333444433
Q ss_pred HHHHHHHHHHHHhhhccCCCCCCCCCCCCC-CCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhh
Q 008355 104 IIYCLGMTLLTLTASVSGLKPSCDKDACHP-TGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFF 182 (568)
Q Consensus 104 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 182 (568)
+.-.+...++.+.+-.|. ++..+ .-.+-+..++..++.|+..|...+....+..+..++++ |..+-
T Consensus 220 ~~R~~fiPlf~~cn~~p~-------~~~~~~~~~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e------~e~aG 286 (309)
T PF01733_consen 220 LLRFLFIPLFLLCNVQPR-------PRYLPVLFNSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEE------RELAG 286 (309)
T ss_dssp ------------------------------------------------------HHHH----------------------
T ss_pred HHHHHHHHHHHHHHhhcc-------cccCCCcccchHHHHHHHHHHHHccchhhhceeeeCCCcCCHHH------HHHHH
Confidence 333333322222211110 00000 11344566777888999999999999999999998777 77777
Q ss_pred hhHHHHHHHhHHHhhhhh
Q 008355 183 NWFYLSINIGALVASSVL 200 (568)
Q Consensus 183 ~~~~~~~~ig~~~~p~~~ 200 (568)
.+.....++|-.+|..+.
T Consensus 287 ~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 287 SVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777777778877776643
No 290
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=66.89 E-value=86 Score=30.53 Aligned_cols=57 Identities=16% Similarity=0.357 Sum_probs=37.3
Q ss_pred hhhhhhhHHHHHHHhHHHhhhhhhhe---ec--cccchhhhhHHHHHHHHHHHHHHhcCcee
Q 008355 178 KSSFFNWFYLSINIGALVASSVLVWI---QM--NVGWGWGFGIPAVAMAIAVVFFFSGSRLY 234 (568)
Q Consensus 178 r~~~~~~~~~~~~ig~~~~p~~~~~i---~~--~~g~~~~f~~~~~~~~~~~~~~~~~~~~~ 234 (568)
|+.......++.++|.+++-+....- .+ .-.|++.+.+.+...++-++++.+.-++.
T Consensus 4 K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~f 65 (267)
T PF07672_consen 4 KSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNF 65 (267)
T ss_pred cceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 67777777788889988775543222 11 12499888887777777776666655443
No 291
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=62.88 E-value=60 Score=26.66 Aligned_cols=41 Identities=10% Similarity=0.234 Sum_probs=32.1
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccC
Q 008355 481 APDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGW 523 (568)
Q Consensus 481 ~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~ 523 (568)
..++.++.++++-...-.+++++-++..|++.+....+. +|
T Consensus 35 ~a~s~k~~~~a~klssefIsGilVGa~iG~llD~~agTs--Pw 75 (116)
T COG5336 35 SAESIKGYAQAFKLSSEFISGILVGAGIGWLLDKFAGTS--PW 75 (116)
T ss_pred cchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCC--cH
Confidence 345678888888888888999988899999988765433 56
No 292
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=62.25 E-value=37 Score=37.35 Aligned_cols=140 Identities=16% Similarity=0.187 Sum_probs=82.8
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHh-hh--hh--hccCcCCCCCceeehhhHHHHHHHHHHHHHHHhhhhHHhhhccCC
Q 008355 408 QLQRMGIGLLISIFSMVAAGILEVVR-LN--IV--KRNNYYDIETIPMTIFWQVPQYFIVGCAEVFTFIGQLEFFYDQAP 482 (568)
Q Consensus 408 ~~~~~~~g~~l~~~~~~~~~~~~~~~-~~--~~--~~~~~~~~~~~~~~~~~~i~~~~l~g~~~~~~~~~~~~~~~~~~P 482 (568)
+.+.+.++.++..+++.......... .. .| ..++..+++........+...+.+.++|.+..-|...++-.|+.+
T Consensus 103 ry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd 182 (571)
T KOG1237|consen 103 RYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFD 182 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccC
Confidence 34567777777777755544443221 11 11 112222333333344455666777788888889999999999998
Q ss_pred hhhH----H--HHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCccCCCCCCccchhHHHHHHHHHHHHHHHHHHHHHhh
Q 008355 483 DAMR----S--LCSALSLTTVAVGNYLSTLLVTIVTKVTTKNGKLGWIPDNLNRGHLDYFYWLLTILSVLNFLVYLWIAK 556 (568)
Q Consensus 483 ~~~r----g--~~~g~~~~~~~lg~~lg~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~f~~~a~~~~v~~v~~~~~~~ 556 (568)
+..+ . .-...+.+..++|..++-.+..++.+.. +|. .-|.+.++..+++.++++...+
T Consensus 183 ~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~------~w~----------lgf~i~~~~~~lai~iF~~g~~ 246 (571)
T KOG1237|consen 183 ELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV------GWK----------LGFGIPTVLNALAILIFLPGFP 246 (571)
T ss_pred ccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc------cce----------eeccHHHHHHHHHHHHHHcCce
Confidence 3222 2 3344455666677777666666554332 451 2356777888888877777777
Q ss_pred hceeccc
Q 008355 557 WFTYKKA 563 (568)
Q Consensus 557 ~~~~~~~ 563 (568)
.++.++.
T Consensus 247 ~y~~~~p 253 (571)
T KOG1237|consen 247 FYRYKKP 253 (571)
T ss_pred eEEeeCC
Confidence 6666553
No 293
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=62.05 E-value=31 Score=35.58 Aligned_cols=101 Identities=11% Similarity=0.122 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc-cCCCccCCCCCCccc--hhH
Q 008355 458 QYFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVTKVTT-KNGKLGWIPDNLNRG--HLD 534 (568)
Q Consensus 458 ~~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~~~~~-~~~~~~~~~~~~~~~--~~~ 534 (568)
.+++.-+.......+.-.....+..++.-|-+.-........|.++|-.+.-.+..... ++-...| | .+++ .+.
T Consensus 139 ~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~-P--~~~g~ItL~ 215 (510)
T KOG3574|consen 139 LFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSI-P--LDQGFITLA 215 (510)
T ss_pred HHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcC-c--CccceEEhh
Confidence 34555555555556666666666777777766665555556666555443322211000 0000011 1 1111 233
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhceec
Q 008355 535 YFYWLLTILSVLNFLVYLWIAKWFTYK 561 (568)
Q Consensus 535 ~~f~~~a~~~~v~~v~~~~~~~~~~~~ 561 (568)
.++++.+.+.+++..+..+..++..+.
T Consensus 216 gy~~fwg~~~~vat~Lv~~~kke~~~~ 242 (510)
T KOG3574|consen 216 GYLWFWGALFIVATTLVALLKKENDES 242 (510)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCchh
Confidence 456666777777766666555554443
No 294
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=60.67 E-value=36 Score=24.16 Aligned_cols=38 Identities=5% Similarity=0.047 Sum_probs=26.4
Q ss_pred HHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 008355 72 TNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLG 109 (568)
Q Consensus 72 ~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 109 (568)
+.......+.....|++.|++++.++..++..++..+.
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~~ 44 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGIA 44 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHH
Confidence 44555666777888999999989977766655444433
No 295
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=58.44 E-value=10 Score=39.29 Aligned_cols=129 Identities=13% Similarity=0.046 Sum_probs=74.5
Q ss_pred HHHHHHHHHhCCC---hhhhhhhHHH-HHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCC
Q 008355 51 NLVNYLQKQLNQG---NVTASNNVTN-WSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSC 126 (568)
Q Consensus 51 ~l~~yl~~~lg~s---~~~~g~~~~~-~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 126 (568)
..|.+..+..+-. ..-.-....+ +.+...++.+...++-++ +||.... ..+.-.+...++.+..-.|.
T Consensus 265 iFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~--~~r~l~i-~v~lR~lfiPlF~~cn~~~~----- 336 (406)
T KOG1479|consen 265 IFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWP--DPRKLTI-PVLLRLLFIPLFLLCNYPPL----- 336 (406)
T ss_pred ecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCC--CCceehH-HHHHHHHHHHHHHHhccCCC-----
Confidence 4566665543222 2222333334 677777887777776664 4444433 33333333333332211000
Q ss_pred CCCCCCCCCchhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHHhhh
Q 008355 127 DKDACHPTGAQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALVASS 198 (568)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~~p~ 198 (568)
...-.+.+.++....+.|+..|-..+....+..+..|+++ +..+-.+.......|-..|..
T Consensus 337 -----~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e------~e~aG~~m~~fl~~Gl~~G~~ 397 (406)
T KOG1479|consen 337 -----PVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSE------KEAAGNLMVFFLVGGLALGSL 397 (406)
T ss_pred -----CceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHH------HHHHHHHHHHHHHHHHHHhhH
Confidence 0011345667777889999999999999999999988887 666655666666666665544
No 296
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=57.82 E-value=1.4e+02 Score=30.63 Aligned_cols=97 Identities=9% Similarity=-0.063 Sum_probs=64.8
Q ss_pred hhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHH
Q 008355 68 SNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYL 147 (568)
Q Consensus 68 g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 147 (568)
|.+=.+..+.++++.+..|.+--++ .|..-++++..-...+.+++-.+ .+.+++..+++-++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w-~r~g~~ll~~~s~~~agllf~m~-----------------~t~~Iw~~Ya~yvl 335 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINW-NRWGDLLLAVGSAVQAGLLFIMA-----------------QTQHIWVCYAGYVL 335 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeecc-chhhHHHHHHHHHHhhhhhhhhh-----------------cccceehhhhhHHH
Confidence 4445566777888899999998777 66644444333222222222222 11567888888888
Q ss_pred HHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHH
Q 008355 148 IALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLS 188 (568)
Q Consensus 148 ~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~ 188 (568)
...-.....+.+..-+++....+. -|..||+....
T Consensus 336 fr~~y~l~itiA~~~iA~nL~~e~------~gLvFGiNTFv 370 (433)
T KOG3810|consen 336 FRVIYQLTITIATFQIARNLSSEL------FGLVFGINTFV 370 (433)
T ss_pred HHhhHhhhhhHHHHHHHHhhhhhh------heeeeehHHHH
Confidence 888888888888888888887776 77788875543
No 297
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=54.68 E-value=33 Score=30.30 Aligned_cols=51 Identities=24% Similarity=0.332 Sum_probs=33.3
Q ss_pred chhHHHHHHHHHHHhhcccCcccccccccccCCCCCchhhhhhhhhhhhHHHHHHHhHHH
Q 008355 136 AQTAVTFVALYLIALGTGGIKPCVSSFGADQFDETDDGEREKKSSFFNWFYLSINIGALV 195 (568)
Q Consensus 136 ~~~~~~~~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~ig~~~ 195 (568)
+....+....++.|+|.-+ ..+.+++..-++++ .|..+|+-.+-.|++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gllG---isYGilSaSWD~~r------~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLLG---ISYGILSASWDPER------EGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHHHh---hhhhhcccccCCCC------CCCcccHHHHHHhHHHHH
Confidence 3445555555555555443 34555666677776 799999998888887654
No 298
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=53.04 E-value=1e+02 Score=33.07 Aligned_cols=34 Identities=15% Similarity=0.086 Sum_probs=17.9
Q ss_pred hhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHH
Q 008355 471 IGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLS 504 (568)
Q Consensus 471 ~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg 504 (568)
.+.-..+..+..++.++-+.--......+|-.++
T Consensus 137 IAVDGWALT~Ls~~n~~~ASTcqtvG~~~Gyfls 170 (544)
T PF13000_consen 137 IAVDGWALTMLSPENVGYASTCQTVGQTAGYFLS 170 (544)
T ss_pred ceeehhhhhhcChhhcchHHHHHHhHhhhhHHHH
Confidence 3333333444566767666655555555555444
No 299
>PRK03612 spermidine synthase; Provisional
Probab=52.54 E-value=2.2e+02 Score=31.05 Aligned_cols=53 Identities=11% Similarity=0.071 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhhhhHHhhhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 008355 459 YFIVGCAEVFTFIGQLEFFYDQAPDAMRSLCSALSLTTVAVGNYLSTLLVTIVT 512 (568)
Q Consensus 459 ~~l~g~~~~~~~~~~~~~~~~~~P~~~rg~~~g~~~~~~~lg~~lg~~l~~~i~ 512 (568)
.++.++..++..|....+..+.. .+.-|...|-....+.+|+++|+++.+.+.
T Consensus 117 ~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 117 VLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 34456667777777655554432 212355566667777888888888888764
No 300
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=49.56 E-value=92 Score=30.23 Aligned_cols=20 Identities=10% Similarity=0.134 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHHHHhhhc
Q 008355 539 LLTILSVLNFLVYLWIAKWF 558 (568)
Q Consensus 539 ~~a~~~~v~~v~~~~~~~~~ 558 (568)
+-.++.+++.+++.++.++.
T Consensus 120 ~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 120 IGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred HHHHHHHHHHHheeeecCCC
Confidence 44556666767666665544
No 301
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=44.26 E-value=78 Score=25.84 Aligned_cols=32 Identities=6% Similarity=-0.086 Sum_probs=20.0
Q ss_pred HHHHHhhhhhHHHHhhhccCchHHHHHHHHHH
Q 008355 75 SGTCYITPLIGAFLADSYMGRFWTIASFSIIY 106 (568)
Q Consensus 75 ~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~ 106 (568)
.++..+...+.|.+-|+.++-++.+.+.+++.
T Consensus 52 ~v~pil~G~~lG~WLD~~~~t~~~~tl~~lll 83 (100)
T TIGR02230 52 VAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIV 83 (100)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHH
Confidence 34445566677888888878766555444433
No 302
>PTZ00370 STEVOR; Provisional
Probab=41.89 E-value=64 Score=31.55 Aligned_cols=24 Identities=25% Similarity=0.563 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcee
Q 008355 537 YWLLTILSVLNFLVYLWIAKWFTY 560 (568)
Q Consensus 537 f~~~a~~~~v~~v~~~~~~~~~~~ 560 (568)
-+++.++.++-+++|+|++||+|+
T Consensus 261 alvllil~vvliilYiwlyrrRK~ 284 (296)
T PTZ00370 261 ALVLLILAVVLIILYIWLYRRRKN 284 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcc
Confidence 455566777777778877777664
No 303
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=38.79 E-value=1.9e+02 Score=29.91 Aligned_cols=82 Identities=10% Similarity=-0.021 Sum_probs=56.4
Q ss_pred ehhHhhHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHH
Q 008355 31 CRFILGNECCERLAYYGMSTNLVNYLQKQLNQGNVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGM 110 (568)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~l~~yl~~~lg~s~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~ 110 (568)
.+.+-++.++.+..--..-.-...|+.+-.|-|...++..-..-+....+..++.|-+.|+. .|+|++...+++.=+..
T Consensus 29 ~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~-sr~Kvi~~~L~lqNlSv 107 (503)
T KOG2601|consen 29 VIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGM-SRVKVIQTWLLLQNLSV 107 (503)
T ss_pred eehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcch-hHHHHHHHHHhhccHHH
Confidence 35555555555554444444566788876665666666666666788888899999999999 99999988877654444
Q ss_pred HHH
Q 008355 111 TLL 113 (568)
Q Consensus 111 ~~~ 113 (568)
+.+
T Consensus 108 ~va 110 (503)
T KOG2601|consen 108 IVA 110 (503)
T ss_pred HHH
Confidence 443
No 304
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=32.36 E-value=4.9e+02 Score=25.51 Aligned_cols=23 Identities=17% Similarity=0.262 Sum_probs=15.4
Q ss_pred chHHHHHHHHHHHHHHHHHHHHH
Q 008355 408 QLQRMGIGLLISIFSMVAAGILE 430 (568)
Q Consensus 408 ~~~~~~~g~~l~~~~~~~~~~~~ 430 (568)
..++-...+++.++++..+....
T Consensus 135 ~~~kgi~~Ll~stigy~~Y~~~~ 157 (269)
T PF06800_consen 135 NMKKGILALLISTIGYWIYSVIP 157 (269)
T ss_pred chhhHHHHHHHHHHHHHHHHHHH
Confidence 34555667777888887766654
No 305
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=31.48 E-value=4.3e+02 Score=24.51 Aligned_cols=33 Identities=21% Similarity=0.495 Sum_probs=18.5
Q ss_pred HHHHHHHhHHHhhhhhhheeccccchhhhhHHHH
Q 008355 185 FYLSINIGALVASSVLVWIQMNVGWGWGFGIPAV 218 (568)
Q Consensus 185 ~~~~~~ig~~~~p~~~~~i~~~~g~~~~f~~~~~ 218 (568)
.+...-++..+|-.+++.+.+..+. +..++++.
T Consensus 167 ~~~~~i~~f~~Ga~~ga~l~~~~~~-~al~~~~~ 199 (209)
T PF06912_consen 167 RYLLIILSFFIGAILGALLYRRLGF-WALLLPAL 199 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHH
Confidence 4445555666666666667666664 34444443
No 306
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=28.07 E-value=4.5e+02 Score=29.86 Aligned_cols=48 Identities=17% Similarity=0.127 Sum_probs=32.5
Q ss_pred hhhccCchHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCCCCCCCCCchhHHHHHHHHHHHhhccc
Q 008355 89 ADSYMGRFWTIASFSIIYCLGMTLLTLTASVSGLKPSCDKDACHPTGAQTAVTFVALYLIALGTGG 154 (568)
Q Consensus 89 aDr~~Grk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~g~ 154 (568)
-|++.||.+-+.++.+.++++++...+.. ...+.+..+.++.+++.++
T Consensus 50 ~~~~~~R~~~l~it~~~f~i~sl~v~ll~------------------~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 50 DDRLTGRLKNLIITLSCFSIASFLVQLLF------------------PKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHh------------------cchHHHHHHHHHHHHHHHH
Confidence 35556778888998888888888777652 2355666666666665543
No 307
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=25.69 E-value=3.8e+02 Score=22.11 Aligned_cols=51 Identities=12% Similarity=0.115 Sum_probs=42.5
Q ss_pred hhhhhhhHHHHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHHHHHHHH
Q 008355 64 NVTASNNVTNWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLGMTLLTL 115 (568)
Q Consensus 64 ~~~~g~~~~~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~~~~~~~ 115 (568)
+...|=+..+|...+.+.+++.+|..|+. -+-+.=.+|..++.+|..+..+
T Consensus 53 p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~-~Pd~~D~iGa~i~L~G~~iI~~ 103 (107)
T PF02694_consen 53 PAAFGRVYAAYGGVFIVASLLWGWLVDGV-RPDRWDWIGAAICLVGVAIILF 103 (107)
T ss_pred cccchhHHHHhhhhHHHHHHHHHhhhcCc-CCChHHHHhHHHHHHhHHheEe
Confidence 36678889999999999999999999998 8888778888887777765443
No 308
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=25.11 E-value=1e+02 Score=26.24 Aligned_cols=24 Identities=8% Similarity=0.070 Sum_probs=9.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcee
Q 008355 537 YWLLTILSVLNFLVYLWIAKWFTY 560 (568)
Q Consensus 537 f~~~a~~~~v~~v~~~~~~~~~~~ 560 (568)
|.+++++..+.+++++++.|++|+
T Consensus 71 ~gv~aGvIg~Illi~y~irR~~Kk 94 (122)
T PF01102_consen 71 FGVMAGVIGIILLISYCIRRLRKK 94 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 334444433334444444444443
No 309
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=23.46 E-value=3.2e+02 Score=23.72 Aligned_cols=23 Identities=26% Similarity=0.185 Sum_probs=17.7
Q ss_pred hccCChhhHHHHHHHHHHHHHHH
Q 008355 478 YDQAPDAMRSLCSALSLTTVAVG 500 (568)
Q Consensus 478 ~~~~P~~~rg~~~g~~~~~~~lg 500 (568)
.+++|+..|..+.+.++......
T Consensus 61 kdi~P~~~R~~i~~~~~~~~~~~ 83 (137)
T PF04281_consen 61 KDIFPPSVRNWISSTVSTTSSAV 83 (137)
T ss_pred hccCCHHHHHHHHHHHHHHHHHH
Confidence 58899999999988877554433
No 310
>COG2119 Predicted membrane protein [Function unknown]
Probab=23.21 E-value=4.2e+02 Score=24.34 Aligned_cols=36 Identities=8% Similarity=0.072 Sum_probs=27.3
Q ss_pred HHHHHHHhhhhhHHHHhhhccCchHHHHHHHHHHHHH
Q 008355 73 NWSGTCYITPLIGAFLADSYMGRFWTIASFSIIYCLG 109 (568)
Q Consensus 73 ~~~~~~~i~~~~~G~laDr~~Grk~~~~~~~~~~~i~ 109 (568)
....+..++...+.++++|+ -.|.+-.++.+++.+.
T Consensus 142 g~~l~s~laVl~G~~ia~ki-~~r~l~~~aallFl~f 177 (190)
T COG2119 142 GMILASVLAVLLGKLIAGKL-PERLLRFIAALLFLIF 177 (190)
T ss_pred HHHHHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHHH
Confidence 35667778888899999999 8888777776654443
No 311
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=20.38 E-value=48 Score=28.46 Aligned_cols=13 Identities=8% Similarity=0.181 Sum_probs=6.0
Q ss_pred hhhhhHHHHHHHH
Q 008355 210 GWGFGIPAVAMAI 222 (568)
Q Consensus 210 ~~~f~~~~~~~~~ 222 (568)
||++++..+++++
T Consensus 1 RW~l~~iii~~i~ 13 (130)
T PF12273_consen 1 RWVLFAIIIVAIL 13 (130)
T ss_pred CeeeHHHHHHHHH
Confidence 4555554443333
Done!