Query 008356
Match_columns 568
No_of_seqs 553 out of 2941
Neff 6.6
Searched_HMMs 29240
Date Tue Mar 26 00:16:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008356.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008356hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 1.6E-28 5.5E-33 248.9 29.6 197 1-212 20-219 (304)
2 1vyh_C Platelet-activating fac 100.0 3E-28 1E-32 258.1 29.2 206 1-212 115-329 (410)
3 4ery_A WD repeat-containing pr 100.0 9.2E-28 3.1E-32 242.0 30.0 195 1-212 30-225 (312)
4 4gqb_B Methylosome protein 50; 100.0 6E-28 2E-32 251.4 27.5 193 1-210 134-331 (344)
5 1got_B GT-beta; complex (GTP-b 100.0 3.3E-27 1.1E-31 242.9 30.6 194 1-212 62-259 (340)
6 2ynn_A Coatomer subunit beta'; 100.0 1.9E-27 6.3E-32 241.1 27.8 199 1-216 62-265 (304)
7 3ow8_A WD repeat-containing pr 100.0 3E-27 1E-31 242.5 27.4 190 1-208 129-319 (321)
8 3frx_A Guanine nucleotide-bind 100.0 9.9E-27 3.4E-31 237.6 28.6 201 1-209 72-316 (319)
9 4gqb_B Methylosome protein 50; 100.0 7.9E-27 2.7E-31 242.9 27.6 194 1-211 89-290 (344)
10 4e54_B DNA damage-binding prot 100.0 6.3E-27 2.1E-31 248.9 26.0 201 1-214 126-331 (435)
11 1vyh_C Platelet-activating fac 100.0 1.8E-26 6.1E-31 244.4 28.7 191 1-209 199-410 (410)
12 1got_B GT-beta; complex (GTP-b 100.0 2.2E-26 7.5E-31 236.8 28.5 187 2-207 151-340 (340)
13 2pbi_B Guanine nucleotide-bind 100.0 2.3E-26 7.9E-31 238.8 28.7 195 1-212 71-273 (354)
14 2xzm_R RACK1; ribosome, transl 100.0 6E-26 2.1E-30 233.5 30.9 189 3-210 35-244 (343)
15 4g56_B MGC81050 protein; prote 100.0 1E-26 3.6E-31 242.0 24.9 195 1-211 146-344 (357)
16 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.4E-26 4.6E-31 239.2 25.3 195 1-209 23-224 (345)
17 3ow8_A WD repeat-containing pr 100.0 1.8E-26 6.3E-31 236.7 26.1 195 1-213 87-282 (321)
18 3iz6_a 40S ribosomal protein R 99.9 1.1E-26 3.9E-31 242.9 24.4 197 1-213 73-283 (380)
19 2pbi_B Guanine nucleotide-bind 99.9 6.9E-26 2.3E-30 235.3 29.3 190 1-207 161-354 (354)
20 2pm7_B Protein transport prote 99.9 7.6E-26 2.6E-30 228.4 27.3 199 1-210 16-238 (297)
21 3ei3_B DNA damage-binding prot 99.9 3.7E-25 1.3E-29 229.0 32.1 201 1-216 80-288 (383)
22 3frx_A Guanine nucleotide-bind 99.9 1.4E-25 4.8E-30 229.0 25.8 195 1-213 24-230 (319)
23 3f3f_A Nucleoporin SEH1; struc 99.9 2.1E-25 7.1E-30 222.4 25.5 198 1-212 18-339 (351)
24 1erj_A Transcriptional repress 99.9 3E-25 1E-29 233.2 28.0 196 1-212 71-289 (393)
25 4g56_B MGC81050 protein; prote 99.9 7.5E-26 2.6E-30 235.5 23.1 197 1-212 49-260 (357)
26 3fm0_A Protein CIAO1; WDR39,SG 99.9 5.4E-25 1.8E-29 227.2 28.1 194 1-209 68-282 (345)
27 1erj_A Transcriptional repress 99.9 4.9E-25 1.7E-29 231.5 28.1 197 1-213 130-344 (393)
28 4h5i_A Guanine nucleotide-exch 99.9 6.2E-26 2.1E-30 237.1 21.0 191 1-209 140-342 (365)
29 3iz6_a 40S ribosomal protein R 99.9 2.6E-25 8.9E-30 232.6 25.4 196 2-210 165-375 (380)
30 2hes_X YDR267CP; beta-propelle 99.9 4.3E-25 1.5E-29 226.5 25.7 194 2-210 22-230 (330)
31 1nr0_A Actin interacting prote 99.9 6.1E-25 2.1E-29 244.6 28.7 197 1-213 25-273 (611)
32 3vl1_A 26S proteasome regulato 99.9 2.1E-25 7.1E-30 232.6 23.3 195 2-212 105-324 (420)
33 1gxr_A ESG1, transducin-like e 99.9 2.4E-24 8.4E-29 215.7 29.8 194 1-213 104-299 (337)
34 3zwl_B Eukaryotic translation 99.9 2.2E-24 7.6E-29 218.3 29.5 198 1-216 39-255 (369)
35 4ery_A WD repeat-containing pr 99.9 2E-24 6.7E-29 217.6 28.3 196 1-213 72-271 (312)
36 2xzm_R RACK1; ribosome, transl 99.9 2E-24 7E-29 222.1 28.9 191 1-212 83-287 (343)
37 2pm7_B Protein transport prote 99.9 9.7E-25 3.3E-29 220.3 25.9 194 2-209 61-284 (297)
38 3dwl_C Actin-related protein 2 99.9 9.1E-26 3.1E-30 232.3 18.4 199 1-213 18-239 (377)
39 3dwl_C Actin-related protein 2 99.9 1E-25 3.5E-30 232.0 18.8 181 1-185 62-269 (377)
40 1nr0_A Actin interacting prote 99.9 1.9E-24 6.6E-29 240.6 28.8 198 1-212 66-357 (611)
41 2ymu_A WD-40 repeat protein; u 99.9 1.7E-24 5.7E-29 235.6 26.9 185 1-207 392-577 (577)
42 3bg1_A Protein SEC13 homolog; 99.9 2.9E-25 9.9E-30 226.4 19.6 200 1-210 20-247 (316)
43 2hes_X YDR267CP; beta-propelle 99.9 1.3E-24 4.4E-29 223.0 24.4 194 1-209 65-279 (330)
44 2pm9_A Protein WEB1, protein t 99.9 2.9E-24 1E-28 222.8 27.4 283 1-347 19-340 (416)
45 3dm0_A Maltose-binding peripla 99.9 4E-24 1.4E-28 240.8 29.7 193 2-212 390-594 (694)
46 3dm0_A Maltose-binding peripla 99.9 3E-24 1E-28 241.9 28.6 178 1-185 437-620 (694)
47 3jrp_A Fusion protein of prote 99.9 2.8E-24 9.6E-29 218.8 25.7 200 1-211 18-241 (379)
48 4a11_B DNA excision repair pro 99.9 9.4E-24 3.2E-28 217.1 29.0 199 1-213 50-279 (408)
49 1gxr_A ESG1, transducin-like e 99.9 8.2E-24 2.8E-28 211.9 27.6 194 1-212 58-257 (337)
50 3vl1_A 26S proteasome regulato 99.9 2E-24 6.7E-29 225.2 23.0 207 1-212 63-280 (420)
51 2aq5_A Coronin-1A; WD40 repeat 99.9 5.7E-24 1.9E-28 222.6 25.9 198 1-212 88-301 (402)
52 2pm9_A Protein WEB1, protein t 99.9 3.8E-24 1.3E-28 221.9 23.6 202 1-216 74-300 (416)
53 4aow_A Guanine nucleotide-bind 99.9 2.8E-23 9.7E-28 209.1 29.2 195 1-213 45-249 (340)
54 4aez_A CDC20, WD repeat-contai 99.9 6.2E-23 2.1E-27 215.2 30.8 193 3-213 100-296 (401)
55 1k8k_C P40, ARP2/3 complex 41 99.9 1.1E-23 3.8E-28 214.8 24.2 198 1-214 15-237 (372)
56 3i2n_A WD repeat-containing pr 99.9 9.6E-24 3.3E-28 213.6 22.8 197 1-211 124-354 (357)
57 4aez_A CDC20, WD repeat-contai 99.9 5.3E-23 1.8E-27 215.7 29.2 192 1-210 141-336 (401)
58 3jrp_A Fusion protein of prote 99.9 2.4E-23 8.2E-28 211.9 25.7 196 2-211 63-288 (379)
59 3dw8_B Serine/threonine-protei 99.9 1.3E-23 4.5E-28 220.3 24.4 193 1-210 35-315 (447)
60 2ymu_A WD-40 repeat protein; u 99.9 3.4E-23 1.2E-27 225.2 28.1 187 1-208 351-537 (577)
61 1sq9_A Antiviral protein SKI8; 99.9 8.6E-24 2.9E-28 218.3 21.9 201 4-210 135-395 (397)
62 3zwl_B Eukaryotic translation 99.9 9.4E-23 3.2E-27 206.4 29.0 194 1-210 81-346 (369)
63 3bg1_A Protein SEC13 homolog; 99.9 2.6E-24 8.8E-29 219.4 17.5 192 2-209 65-292 (316)
64 3k26_A Polycomb protein EED; W 99.9 7.1E-24 2.4E-28 214.8 20.3 193 2-213 77-321 (366)
65 4gga_A P55CDC, cell division c 99.9 1.2E-22 4E-27 214.7 30.3 197 1-213 154-398 (420)
66 3sfz_A APAF-1, apoptotic pepti 99.9 1.3E-22 4.5E-27 241.4 33.7 151 1-154 622-775 (1249)
67 1r5m_A SIR4-interacting protei 99.9 5.8E-23 2E-27 212.0 26.6 192 1-211 52-279 (425)
68 3mmy_A MRNA export factor; mRN 99.9 3E-23 1E-27 209.9 23.7 178 1-185 46-333 (368)
69 1k8k_C P40, ARP2/3 complex 41 99.9 5.3E-23 1.8E-27 209.7 25.6 193 1-210 59-274 (372)
70 2aq5_A Coronin-1A; WD40 repeat 99.9 5.5E-23 1.9E-27 215.0 26.2 198 2-212 42-256 (402)
71 2j04_B YDR362CP, TAU91; beta p 99.9 1.4E-23 4.6E-28 231.7 22.5 187 6-210 225-428 (524)
72 3mkq_A Coatomer beta'-subunit; 99.9 7.9E-23 2.7E-27 231.6 29.3 195 1-212 20-219 (814)
73 4aow_A Guanine nucleotide-bind 99.9 9.7E-23 3.3E-27 205.1 26.8 194 2-210 136-337 (340)
74 4ggc_A P55CDC, cell division c 99.9 1.8E-22 6E-27 201.3 28.3 196 1-212 74-317 (318)
75 3v7d_B Cell division control p 99.9 9.9E-23 3.4E-27 216.2 27.5 190 2-212 128-343 (464)
76 3i2n_A WD repeat-containing pr 99.9 3.6E-23 1.2E-27 209.3 22.9 199 1-212 72-293 (357)
77 3ei3_B DNA damage-binding prot 99.9 7E-23 2.4E-27 211.9 25.5 205 1-213 125-342 (383)
78 3k26_A Polycomb protein EED; W 99.9 1.1E-23 3.8E-28 213.4 19.1 194 1-209 122-365 (366)
79 2xyi_A Probable histone-bindin 99.9 3.6E-23 1.2E-27 219.9 23.6 197 1-211 135-354 (430)
80 3lrv_A PRE-mRNA-splicing facto 99.9 1.8E-23 6.3E-28 214.6 20.1 191 2-213 44-247 (343)
81 1r5m_A SIR4-interacting protei 99.9 1.4E-22 4.7E-27 209.2 25.4 192 1-213 115-322 (425)
82 4gga_A P55CDC, cell division c 99.9 7.4E-22 2.5E-26 208.6 31.5 197 2-213 113-313 (420)
83 1sq9_A Antiviral protein SKI8; 99.9 4.8E-23 1.7E-27 212.7 21.3 198 2-217 70-329 (397)
84 4a11_B DNA excision repair pro 99.9 3.4E-22 1.2E-26 205.5 27.3 198 1-213 106-368 (408)
85 3odt_A Protein DOA1; ubiquitin 99.9 7.2E-22 2.5E-26 196.0 28.4 187 2-212 26-216 (313)
86 2xyi_A Probable histone-bindin 99.9 2.6E-22 8.9E-27 213.2 25.9 198 1-210 188-410 (430)
87 3dw8_B Serine/threonine-protei 99.9 7.6E-23 2.6E-27 214.6 21.0 195 1-212 100-375 (447)
88 3lrv_A PRE-mRNA-splicing facto 99.9 2.3E-22 7.9E-27 206.4 24.1 191 2-210 84-292 (343)
89 4e54_B DNA damage-binding prot 99.9 3.8E-23 1.3E-27 219.7 18.2 209 1-213 171-390 (435)
90 3gre_A Serine/threonine-protei 99.9 9.7E-23 3.3E-27 214.6 20.7 192 2-207 178-437 (437)
91 3gre_A Serine/threonine-protei 99.9 1.2E-22 4.1E-27 213.8 21.0 202 1-216 70-298 (437)
92 1pgu_A Actin interacting prote 99.9 2.6E-22 9E-27 218.4 24.3 192 1-212 25-240 (615)
93 3mkq_A Coatomer beta'-subunit; 99.9 3E-22 1E-26 226.8 25.1 196 1-213 62-262 (814)
94 1p22_A F-BOX/WD-repeat protein 99.9 1.9E-21 6.7E-26 206.0 29.8 186 2-213 139-328 (435)
95 1yfq_A Cell cycle arrest prote 99.9 2.6E-22 8.9E-27 202.6 21.5 192 1-211 18-226 (342)
96 2vdu_B TRNA (guanine-N(7)-)-me 99.9 4.7E-22 1.6E-26 211.9 24.4 200 1-217 11-278 (450)
97 3v7d_B Cell division control p 99.9 1.3E-21 4.3E-26 207.7 27.5 189 2-212 170-383 (464)
98 4ggc_A P55CDC, cell division c 99.9 4.3E-21 1.5E-25 191.3 29.4 197 1-212 32-232 (318)
99 3jro_A Fusion protein of prote 99.9 4.8E-22 1.6E-26 227.3 23.8 201 1-212 16-240 (753)
100 2vdu_B TRNA (guanine-N(7)-)-me 99.9 7.6E-22 2.6E-26 210.3 23.1 194 1-208 109-337 (450)
101 2oaj_A Protein SNI1; WD40 repe 99.9 7.2E-22 2.5E-26 230.8 23.7 192 1-212 24-244 (902)
102 1yfq_A Cell cycle arrest prote 99.9 9.9E-22 3.4E-26 198.3 21.2 192 1-213 63-285 (342)
103 3odt_A Protein DOA1; ubiquitin 99.9 6.7E-21 2.3E-25 189.0 26.5 184 5-213 113-299 (313)
104 2ovr_B FBW7, F-BOX/WD repeat p 99.9 6.3E-21 2.2E-25 202.1 28.0 186 2-213 125-311 (445)
105 2j04_B YDR362CP, TAU91; beta p 99.9 8.6E-22 3E-26 217.2 20.7 196 3-213 170-389 (524)
106 3sfz_A APAF-1, apoptotic pepti 99.9 1.5E-21 5.1E-26 232.4 22.4 193 1-213 968-1161(1249)
107 1p22_A F-BOX/WD-repeat protein 99.9 1.7E-20 5.9E-25 198.7 27.8 182 4-210 181-365 (435)
108 3jro_A Fusion protein of prote 99.9 2.8E-21 9.7E-26 220.9 23.2 197 1-211 60-286 (753)
109 1pgu_A Actin interacting prote 99.9 5E-21 1.7E-25 208.3 24.1 188 2-210 414-614 (615)
110 4gq1_A NUP37; propeller, trans 99.9 1.1E-21 3.8E-26 206.4 18.0 206 2-213 97-351 (393)
111 2w18_A PALB2, fancn, partner a 99.9 9.2E-21 3.1E-25 198.2 22.9 174 15-208 156-355 (356)
112 4gq1_A NUP37; propeller, trans 99.9 1.9E-21 6.3E-26 204.7 17.8 177 5-185 155-377 (393)
113 3vu4_A KMHSV2; beta-propeller 99.9 1E-20 3.6E-25 196.3 22.1 192 1-211 26-272 (355)
114 3vu4_A KMHSV2; beta-propeller 99.9 5.5E-20 1.9E-24 190.8 25.2 197 2-212 66-338 (355)
115 2j04_A TAU60, YPL007P, hypothe 99.9 3.3E-20 1.1E-24 205.1 23.4 184 1-209 92-296 (588)
116 3mmy_A MRNA export factor; mRN 99.9 3.4E-20 1.1E-24 187.5 21.7 134 21-155 24-162 (368)
117 3f3f_A Nucleoporin SEH1; struc 99.8 5.9E-20 2E-24 182.9 22.1 120 35-155 9-145 (351)
118 3bws_A Protein LP49; two-domai 99.8 6.2E-20 2.1E-24 192.3 23.3 195 1-212 129-336 (433)
119 1l0q_A Surface layer protein; 99.8 1.8E-19 6.1E-24 186.2 25.2 195 1-212 38-235 (391)
120 2j04_A TAU60, YPL007P, hypothe 99.8 1.9E-20 6.6E-25 207.0 19.0 187 1-212 22-256 (588)
121 2oaj_A Protein SNI1; WD40 repe 99.8 2.7E-20 9.3E-25 217.5 21.3 208 1-213 442-735 (902)
122 2ovr_B FBW7, F-BOX/WD repeat p 99.8 3.3E-19 1.1E-23 188.9 27.2 183 5-213 168-351 (445)
123 1l0q_A Surface layer protein; 99.8 4.9E-19 1.7E-23 182.9 27.4 198 1-217 80-282 (391)
124 3bws_A Protein LP49; two-domai 99.8 9.8E-20 3.4E-24 190.7 21.8 205 2-213 177-393 (433)
125 4h5i_A Guanine nucleotide-exch 99.8 1E-19 3.5E-24 190.0 20.7 152 1-154 183-344 (365)
126 2hqs_A Protein TOLB; TOLB, PAL 99.8 1.5E-17 5.3E-22 176.7 25.8 189 1-209 185-386 (415)
127 2w18_A PALB2, fancn, partner a 99.8 3.1E-18 1E-22 179.1 18.7 147 2-151 186-355 (356)
128 2oit_A Nucleoporin 214KDA; NH2 99.8 1.6E-18 5.6E-23 186.1 17.0 202 1-211 43-279 (434)
129 2ojh_A Uncharacterized protein 99.8 4.8E-17 1.6E-21 158.5 20.2 204 1-212 48-260 (297)
130 2hqs_A Protein TOLB; TOLB, PAL 99.7 3.4E-16 1.2E-20 166.3 25.2 188 6-211 143-345 (415)
131 3u4y_A Uncharacterized protein 99.7 1.9E-15 6.4E-20 152.3 26.3 200 1-213 4-210 (331)
132 2oit_A Nucleoporin 214KDA; NH2 99.7 2E-16 6.9E-21 169.8 19.4 198 1-201 99-335 (434)
133 3vgz_A Uncharacterized protein 99.7 1.5E-15 5E-20 153.6 23.7 198 1-213 47-265 (353)
134 1ri6_A Putative isomerase YBHE 99.7 1.8E-15 6E-20 151.8 22.9 196 1-210 44-262 (343)
135 1nir_A Nitrite reductase; hemo 99.7 6.3E-15 2.1E-19 162.9 28.9 193 1-210 185-402 (543)
136 2ojh_A Uncharacterized protein 99.7 6.3E-16 2.1E-20 150.6 18.3 182 1-186 91-290 (297)
137 3vgz_A Uncharacterized protein 99.7 8.2E-15 2.8E-19 148.1 26.2 196 1-213 95-306 (353)
138 2ecf_A Dipeptidyl peptidase IV 99.7 5.1E-16 1.8E-20 174.8 19.1 198 1-212 43-323 (741)
139 1nir_A Nitrite reductase; hemo 99.7 2.6E-15 8.8E-20 166.0 23.9 198 1-216 144-361 (543)
140 1pby_B Quinohemoprotein amine 99.7 4.4E-15 1.5E-19 148.5 22.9 194 1-217 40-317 (337)
141 3u4y_A Uncharacterized protein 99.7 2.8E-15 9.6E-20 151.0 21.5 197 1-210 90-304 (331)
142 1ri6_A Putative isomerase YBHE 99.7 4.6E-15 1.6E-19 148.8 20.5 190 6-210 4-209 (343)
143 1pby_B Quinohemoprotein amine 99.7 9.2E-15 3.1E-19 146.2 22.6 145 7-154 2-164 (337)
144 1xfd_A DIP, dipeptidyl aminope 99.6 9.1E-16 3.1E-20 172.0 14.9 197 1-212 23-291 (723)
145 1jmx_B Amine dehydrogenase; ox 99.6 1E-14 3.6E-19 146.8 20.6 151 1-155 6-177 (349)
146 1jmx_B Amine dehydrogenase; ox 99.6 7.6E-15 2.6E-19 147.8 19.4 193 1-216 49-331 (349)
147 3hfq_A Uncharacterized protein 99.6 1.2E-13 4.1E-18 140.7 24.4 197 1-209 92-316 (347)
148 3hfq_A Uncharacterized protein 99.6 1.4E-13 4.7E-18 140.2 21.2 196 1-210 46-271 (347)
149 1k32_A Tricorn protease; prote 99.6 7.5E-14 2.6E-18 164.8 21.0 174 1-185 302-489 (1045)
150 2z3z_A Dipeptidyl aminopeptida 99.6 4.6E-14 1.6E-18 158.1 17.5 181 1-185 127-373 (706)
151 3scy_A Hypothetical bacterial 99.5 1E-12 3.5E-17 134.7 25.8 194 5-209 108-336 (361)
152 2ecf_A Dipeptidyl peptidase IV 99.5 5.9E-14 2E-18 157.9 16.5 192 1-209 158-412 (741)
153 1xfd_A DIP, dipeptidyl aminope 99.5 1.1E-13 3.8E-18 155.0 18.4 179 1-185 67-323 (723)
154 1k32_A Tricorn protease; prote 99.5 7.5E-14 2.6E-18 164.8 17.1 198 1-210 251-461 (1045)
155 3scy_A Hypothetical bacterial 99.5 1.8E-12 6.2E-17 132.9 24.7 196 1-210 56-291 (361)
156 2z3z_A Dipeptidyl aminopeptida 99.5 4.8E-13 1.6E-17 149.8 21.3 196 1-210 187-435 (706)
157 3o4h_A Acylamino-acid-releasin 99.5 2.8E-13 9.7E-18 148.8 18.7 189 1-212 28-229 (582)
158 3pe7_A Oligogalacturonate lyas 99.5 1.7E-12 5.8E-17 133.5 23.0 198 1-212 42-275 (388)
159 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.3E-12 4.4E-17 135.4 22.1 202 1-210 46-291 (365)
160 4a5s_A Dipeptidyl peptidase 4 99.5 1.7E-13 5.7E-18 155.9 16.6 179 1-185 23-277 (740)
161 3fvz_A Peptidyl-glycine alpha- 99.5 2.4E-12 8.4E-17 131.7 23.4 203 1-212 30-279 (329)
162 3o4h_A Acylamino-acid-releasin 99.5 1.9E-13 6.4E-18 150.2 15.9 184 1-208 71-274 (582)
163 1jof_A Carboxy-CIS,CIS-muconat 99.5 2.2E-12 7.6E-17 133.6 22.8 198 1-210 89-341 (365)
164 1q7f_A NHL, brain tumor CG1071 99.5 9.3E-12 3.2E-16 123.3 25.3 189 4-212 87-282 (286)
165 1z68_A Fibroblast activation p 99.5 1.7E-13 5.7E-18 154.1 13.6 178 1-184 22-269 (719)
166 1z68_A Fibroblast activation p 99.5 1.2E-13 4E-18 155.4 11.0 179 1-184 66-328 (719)
167 4a5s_A Dipeptidyl peptidase 4 99.4 5.5E-12 1.9E-16 143.4 18.0 178 2-183 69-334 (740)
168 1q7f_A NHL, brain tumor CG1071 99.4 1.5E-10 5E-15 114.7 24.2 188 2-208 37-236 (286)
169 2dg1_A DRP35, lactonase; beta 99.3 2.9E-10 1E-14 114.8 25.9 193 1-208 51-261 (333)
170 3pe7_A Oligogalacturonate lyas 99.3 3.3E-11 1.1E-15 123.9 18.0 202 1-210 87-329 (388)
171 3e5z_A Putative gluconolactona 99.3 1.3E-10 4.5E-15 116.0 21.5 187 1-209 34-245 (296)
172 3c5m_A Oligogalacturonate lyas 99.3 1.7E-11 5.8E-16 125.7 14.6 199 1-211 42-274 (396)
173 3fvz_A Peptidyl-glycine alpha- 99.3 1.4E-10 4.7E-15 118.6 20.3 192 1-209 97-321 (329)
174 3azo_A Aminopeptidase; POP fam 99.3 9.3E-11 3.2E-15 130.2 20.0 149 3-154 87-275 (662)
175 3azo_A Aminopeptidase; POP fam 99.3 5E-11 1.7E-15 132.4 17.0 177 2-183 31-257 (662)
176 3c5m_A Oligogalacturonate lyas 99.3 3E-11 1E-15 123.8 13.3 199 2-211 88-330 (396)
177 1xip_A Nucleoporin NUP159; bet 99.2 8.4E-11 2.9E-15 124.9 15.3 169 1-185 44-231 (388)
178 3no2_A Uncharacterized protein 99.2 4.8E-10 1.6E-14 112.9 20.1 186 4-212 3-197 (276)
179 2gop_A Trilobed protease; beta 99.2 2.8E-10 9.5E-15 115.3 18.0 177 1-209 65-290 (347)
180 2xdw_A Prolyl endopeptidase; a 99.2 6.2E-10 2.1E-14 125.7 22.2 173 1-179 131-347 (710)
181 3no2_A Uncharacterized protein 99.2 1.6E-09 5.5E-14 109.0 22.6 202 2-212 44-263 (276)
182 1rwi_B Serine/threonine-protei 99.2 1.8E-09 6.3E-14 105.2 21.6 190 2-210 74-264 (270)
183 2oiz_A Aromatic amine dehydrog 99.2 1.3E-09 4.3E-14 113.6 21.4 189 1-211 56-335 (361)
184 2dg1_A DRP35, lactonase; beta 99.2 5.4E-10 1.9E-14 112.8 17.9 188 1-209 12-212 (333)
185 3dsm_A Uncharacterized protein 99.1 2.2E-09 7.4E-14 110.0 20.7 182 7-210 55-253 (328)
186 2oiz_A Aromatic amine dehydrog 99.1 2.7E-09 9.2E-14 111.2 21.6 173 1-180 114-360 (361)
187 3dsm_A Uncharacterized protein 99.1 1.8E-09 6.3E-14 110.5 19.7 188 2-209 91-301 (328)
188 1rwi_B Serine/threonine-protei 99.1 3.7E-09 1.3E-13 103.0 20.0 189 2-210 31-222 (270)
189 2bkl_A Prolyl endopeptidase; m 99.1 1.5E-09 5.1E-14 122.4 19.3 191 1-209 127-348 (695)
190 1qks_A Cytochrome CD1 nitrite 99.1 1.8E-08 6.3E-13 111.9 25.7 189 6-212 167-375 (567)
191 3e5z_A Putative gluconolactona 99.1 5.9E-09 2E-13 103.9 19.6 173 1-184 75-273 (296)
192 2xdw_A Prolyl endopeptidase; a 99.1 1.3E-08 4.3E-13 115.0 24.3 198 1-210 177-414 (710)
193 2gop_A Trilobed protease; beta 99.1 7.5E-09 2.6E-13 104.7 20.0 158 1-177 110-311 (347)
194 2z2n_A Virginiamycin B lyase; 99.1 5.9E-08 2E-12 95.2 25.9 187 2-208 64-253 (299)
195 2z2n_A Virginiamycin B lyase; 99.1 6.8E-08 2.3E-12 94.7 26.1 188 2-208 22-211 (299)
196 1yr2_A Prolyl oligopeptidase; 99.0 1.1E-08 3.9E-13 116.2 20.3 188 1-208 169-391 (741)
197 2bkl_A Prolyl endopeptidase; m 99.0 8.9E-09 3.1E-13 116.1 18.7 197 1-210 174-397 (695)
198 1qks_A Cytochrome CD1 nitrite 99.0 1.4E-07 4.7E-12 104.9 27.6 194 1-210 203-421 (567)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 99.0 3.9E-08 1.3E-12 97.7 20.4 191 1-209 24-255 (314)
200 1pjx_A Dfpase, DIISOPROPYLFLUO 98.9 7.6E-08 2.6E-12 95.6 21.7 190 2-210 78-299 (314)
201 2qc5_A Streptogramin B lactona 98.9 3.4E-07 1.1E-11 89.7 26.1 187 2-208 69-258 (300)
202 2qc5_A Streptogramin B lactona 98.9 3.7E-07 1.3E-11 89.4 26.0 188 2-208 27-216 (300)
203 3hrp_A Uncharacterized protein 98.8 1.9E-07 6.4E-12 99.2 21.8 189 1-209 137-353 (409)
204 3dr2_A Exported gluconolactona 98.8 1.3E-07 4.4E-12 95.2 19.0 173 1-182 51-253 (305)
205 3g4e_A Regucalcin; six bladed 98.8 4.8E-07 1.7E-11 90.7 22.8 175 2-183 61-257 (297)
206 3g4e_A Regucalcin; six bladed 98.8 8.5E-07 2.9E-11 89.0 24.5 190 2-212 20-231 (297)
207 2ghs_A AGR_C_1268P; regucalcin 98.8 1.2E-06 4E-11 89.5 25.1 186 1-208 55-258 (326)
208 1yr2_A Prolyl oligopeptidase; 98.8 3E-07 1E-11 104.5 21.2 198 1-210 215-441 (741)
209 1xip_A Nucleoporin NUP159; bet 98.8 6E-08 2.1E-12 103.0 13.9 124 5-140 96-231 (388)
210 2hz6_A Endoplasmic reticulum t 98.7 1.8E-09 6.2E-14 113.0 2.1 186 5-213 8-195 (369)
211 3hrp_A Uncharacterized protein 98.7 8.8E-07 3E-11 94.0 22.9 191 1-207 177-407 (409)
212 2mad_H Methylamine dehydrogena 98.7 1.7E-06 5.9E-11 90.8 24.6 193 1-216 131-356 (373)
213 2qe8_A Uncharacterized protein 98.7 6.9E-07 2.3E-11 91.8 20.0 181 2-185 74-308 (343)
214 2ghs_A AGR_C_1268P; regucalcin 98.7 2.6E-06 9E-11 86.9 24.1 170 2-182 97-286 (326)
215 3iuj_A Prolyl endopeptidase; h 98.7 7.4E-07 2.5E-11 100.7 20.6 176 1-185 135-343 (693)
216 2iwa_A Glutamine cyclotransfer 98.6 3.6E-06 1.2E-10 84.8 21.5 192 2-211 28-238 (266)
217 3sjl_D Methylamine dehydrogena 98.6 4.8E-06 1.6E-10 88.3 22.4 147 2-154 40-209 (386)
218 2mad_H Methylamine dehydrogena 98.6 1.4E-05 4.9E-10 83.7 25.4 206 1-217 72-314 (373)
219 3iuj_A Prolyl endopeptidase; h 98.6 4.4E-06 1.5E-10 94.3 22.9 195 1-210 181-405 (693)
220 3c75_H MADH, methylamine dehyd 98.6 1.6E-06 5.6E-11 93.0 18.0 112 4-119 82-216 (426)
221 3sjl_D Methylamine dehydrogena 98.5 6.5E-06 2.2E-10 87.2 20.4 198 1-219 143-372 (386)
222 3dr2_A Exported gluconolactona 98.5 1.6E-06 5.5E-11 87.1 15.0 172 2-185 93-294 (305)
223 2ece_A 462AA long hypothetical 98.5 1.2E-05 4E-10 86.7 21.7 192 4-209 93-351 (462)
224 2qe8_A Uncharacterized protein 98.5 1.7E-06 5.8E-11 88.8 14.5 189 2-208 24-276 (343)
225 1yiq_A Quinohemoprotein alcoho 98.5 5E-06 1.7E-10 94.3 19.5 178 2-181 242-531 (689)
226 1kb0_A Quinohemoprotein alcoho 98.4 8E-06 2.7E-10 92.4 20.3 179 2-182 250-534 (677)
227 3nol_A Glutamine cyclotransfer 98.4 1.2E-05 4.2E-10 80.6 18.8 172 2-182 50-239 (262)
228 1npe_A Nidogen, entactin; glyc 98.4 0.0001 3.5E-09 72.2 24.9 187 6-209 1-197 (267)
229 1mda_H Methylamine dehydrogena 98.3 3.7E-06 1.3E-10 88.5 14.0 172 1-177 71-366 (368)
230 1fwx_A Nitrous oxide reductase 98.3 1.2E-05 4.1E-10 89.3 18.4 192 4-210 99-361 (595)
231 1npe_A Nidogen, entactin; glyc 98.3 0.00042 1.4E-08 67.8 27.6 191 2-211 43-239 (267)
232 2ece_A 462AA long hypothetical 98.3 2.9E-05 1E-09 83.6 20.2 181 2-185 145-398 (462)
233 1mda_H Methylamine dehydrogena 98.3 1.5E-05 5.2E-10 83.8 16.5 101 7-111 32-157 (368)
234 3c75_H MADH, methylamine dehyd 98.2 4.8E-05 1.6E-09 81.6 19.5 155 1-155 183-404 (426)
235 3mbr_X Glutamine cyclotransfer 98.2 0.00018 6E-09 71.5 22.0 168 6-181 31-217 (243)
236 3nok_A Glutaminyl cyclase; bet 98.2 8.8E-05 3E-09 74.6 19.9 167 6-181 65-248 (268)
237 2fp8_A Strictosidine synthase; 98.2 0.00033 1.1E-08 70.6 24.4 176 2-185 26-246 (322)
238 1fwx_A Nitrous oxide reductase 98.2 4.8E-06 1.6E-10 92.4 11.1 178 4-187 145-407 (595)
239 2hz6_A Endoplasmic reticulum t 98.2 3E-07 1E-11 96.1 0.4 144 4-155 47-194 (369)
240 1kb0_A Quinohemoprotein alcoho 98.1 7.2E-05 2.5E-09 84.6 19.7 197 6-219 174-516 (677)
241 1yiq_A Quinohemoprotein alcoho 98.1 0.00017 5.6E-09 81.8 20.7 103 15-118 182-344 (689)
242 1ijq_A LDL receptor, low-densi 98.0 0.0027 9.1E-08 64.4 27.1 185 8-209 3-194 (316)
243 3q7m_A Lipoprotein YFGL, BAMB; 98.0 0.00053 1.8E-08 70.3 21.8 145 5-156 52-210 (376)
244 3hxj_A Pyrrolo-quinoline quino 98.0 0.00018 6E-09 71.6 16.8 137 6-153 107-244 (330)
245 3q7m_A Lipoprotein YFGL, BAMB; 97.9 0.00048 1.6E-08 70.6 19.4 187 6-214 143-341 (376)
246 3amr_A 3-phytase; beta-propell 97.9 0.0012 4.2E-08 68.8 22.4 201 5-217 39-271 (355)
247 2fp8_A Strictosidine synthase; 97.9 0.001 3.5E-08 66.9 21.3 188 3-210 88-313 (322)
248 2xe4_A Oligopeptidase B; hydro 97.9 0.00052 1.8E-08 78.4 21.1 148 1-153 180-354 (751)
249 2iwa_A Glutamine cyclotransfer 97.9 0.00084 2.9E-08 67.4 20.0 174 27-219 10-190 (266)
250 3nok_A Glutaminyl cyclase; bet 97.9 0.00074 2.5E-08 67.8 19.4 172 28-219 45-219 (268)
251 1ijq_A LDL receptor, low-densi 97.9 0.012 4.2E-07 59.4 28.9 173 2-176 37-217 (316)
252 3qqz_A Putative uncharacterize 97.9 0.0039 1.3E-07 62.1 24.3 181 1-185 33-241 (255)
253 2ad6_A Methanol dehydrogenase 97.9 0.00071 2.4E-08 74.9 20.7 140 17-157 273-498 (571)
254 3v65_B Low-density lipoprotein 97.8 0.0042 1.5E-07 65.0 25.4 184 8-209 89-276 (386)
255 1kv9_A Type II quinohemoprotei 97.8 0.00034 1.2E-08 78.9 17.8 155 2-156 237-491 (668)
256 2p4o_A Hypothetical protein; p 97.8 0.0012 4.2E-08 66.2 20.1 177 2-183 79-273 (306)
257 2p4o_A Hypothetical protein; p 97.8 0.0067 2.3E-07 60.7 24.9 176 1-185 38-229 (306)
258 3nol_A Glutamine cyclotransfer 97.8 0.00069 2.4E-08 67.9 16.8 172 28-219 33-210 (262)
259 3hxj_A Pyrrolo-quinoline quino 97.8 0.00053 1.8E-08 68.1 16.0 176 5-209 147-323 (330)
260 1flg_A Protein (quinoprotein e 97.8 0.0016 5.4E-08 72.3 21.3 141 16-157 291-520 (582)
261 3v64_C Agrin; beta propeller, 97.8 0.0074 2.5E-07 62.2 25.1 179 14-209 51-233 (349)
262 3v64_C Agrin; beta propeller, 97.7 0.018 6.2E-07 59.2 27.9 169 2-175 80-253 (349)
263 3sov_A LRP-6, low-density lipo 97.7 0.0033 1.1E-07 64.2 22.0 185 8-209 6-196 (318)
264 3p5b_L Low density lipoprotein 97.7 0.015 5.3E-07 61.1 27.0 185 8-209 85-276 (400)
265 3mbr_X Glutamine cyclotransfer 97.6 0.003 1E-07 62.6 18.7 171 28-219 11-188 (243)
266 3v65_B Low-density lipoprotein 97.6 0.016 5.6E-07 60.5 25.6 188 2-207 123-315 (386)
267 3p5b_L Low density lipoprotein 97.6 0.053 1.8E-06 56.9 29.5 172 2-175 119-298 (400)
268 2p9w_A MAL S 1 allergenic prot 97.6 0.0082 2.8E-07 62.1 21.8 152 2-154 20-216 (334)
269 1w6s_A Methanol dehydrogenase 97.6 0.0037 1.3E-07 69.7 20.6 154 4-158 250-508 (599)
270 3sov_A LRP-6, low-density lipo 97.5 0.03 1E-06 57.0 25.5 190 2-209 42-237 (318)
271 2ad6_A Methanol dehydrogenase 97.5 0.0048 1.6E-07 68.3 19.8 113 6-120 160-343 (571)
272 3tc9_A Hypothetical hydrolase; 97.4 0.0033 1.1E-07 67.0 17.6 149 2-153 144-301 (430)
273 2xe4_A Oligopeptidase B; hydro 97.4 0.0037 1.3E-07 71.2 18.4 135 39-177 175-329 (751)
274 3qqz_A Putative uncharacterize 97.4 0.034 1.2E-06 55.2 23.2 143 37-181 26-186 (255)
275 1kv9_A Type II quinohemoprotei 97.4 0.0069 2.3E-07 68.2 20.1 195 6-213 66-336 (668)
276 1k3i_A Galactose oxidase precu 97.4 0.0018 6.3E-08 72.4 14.9 150 3-155 194-380 (656)
277 3m0c_C LDL receptor, low-densi 97.3 0.046 1.6E-06 62.9 26.5 179 14-208 402-587 (791)
278 4hw6_A Hypothetical protein, I 97.3 0.014 4.8E-07 62.2 20.6 148 2-153 146-304 (433)
279 1k3i_A Galactose oxidase precu 97.3 0.0035 1.2E-07 70.1 16.2 179 3-186 251-529 (656)
280 4a0p_A LRP6, LRP-6, low-densit 97.2 0.12 4.2E-06 57.7 27.4 171 7-183 7-181 (628)
281 1w6s_A Methanol dehydrogenase 97.2 0.014 4.8E-07 65.0 19.5 201 6-213 62-345 (599)
282 3tc9_A Hypothetical hydrolase; 97.2 0.01 3.4E-07 63.2 17.6 152 40-208 139-299 (430)
283 3m0c_C LDL receptor, low-densi 97.2 0.1 3.5E-06 60.0 27.2 151 3-155 432-591 (791)
284 2p9w_A MAL S 1 allergenic prot 97.1 0.016 5.6E-07 59.8 18.1 156 41-209 16-214 (334)
285 4a2l_A BT_4663, two-component 97.1 0.091 3.1E-06 59.7 25.4 167 9-183 276-467 (795)
286 4a0p_A LRP6, LRP-6, low-densit 97.1 0.29 1E-05 54.6 29.0 170 2-177 44-217 (628)
287 4a2l_A BT_4663, two-component 97.0 0.06 2.1E-06 61.2 23.4 166 8-183 369-558 (795)
288 3s94_A LRP-6, low-density lipo 97.0 0.11 3.8E-06 57.9 25.0 183 12-208 14-200 (619)
289 1flg_A Protein (quinoprotein e 97.0 0.0093 3.2E-07 66.1 16.1 77 59-137 465-543 (582)
290 3kya_A Putative phosphatase; s 97.0 0.037 1.3E-06 60.3 19.6 151 2-153 146-341 (496)
291 3kya_A Putative phosphatase; s 96.8 0.033 1.1E-06 60.6 17.6 141 40-182 141-324 (496)
292 3sre_A PON1, serum paraoxonase 96.8 0.18 6E-06 52.5 22.4 169 14-185 81-284 (355)
293 4hw6_A Hypothetical protein, I 96.8 0.042 1.5E-06 58.4 18.0 150 2-152 235-432 (433)
294 3s94_A LRP-6, low-density lipo 96.7 0.29 9.9E-06 54.5 24.7 152 2-154 47-203 (619)
295 1n7d_A LDL receptor, low-densi 96.7 0.0066 2.2E-07 68.9 11.3 151 2-154 413-572 (699)
296 3v9f_A Two-component system se 96.6 0.11 3.8E-06 58.8 21.4 180 8-210 375-568 (781)
297 2xbg_A YCF48-like protein; pho 96.6 0.41 1.4E-05 48.3 23.2 147 26-179 151-304 (327)
298 3ei3_A DNA damage-binding prot 96.6 0.071 2.4E-06 63.9 19.7 179 16-210 807-999 (1158)
299 1n7d_A LDL receptor, low-densi 96.5 0.0039 1.3E-07 70.7 8.1 180 14-209 384-570 (699)
300 3v9f_A Two-component system se 96.5 0.19 6.5E-06 56.9 22.0 169 8-185 419-600 (781)
301 3pbp_A Nucleoporin NUP82; beta 96.1 0.28 9.4E-06 52.4 19.1 141 5-149 31-208 (452)
302 2xzh_A Clathrin heavy chain 1; 96.1 0.46 1.6E-05 49.2 19.6 200 3-213 75-293 (365)
303 3s25_A Hypothetical 7-bladed b 96.0 0.25 8.6E-06 49.9 17.5 176 2-201 60-255 (302)
304 3amr_A 3-phytase; beta-propell 96.0 0.42 1.4E-05 49.7 19.3 138 15-154 98-264 (355)
305 3sre_A PON1, serum paraoxonase 95.9 0.29 9.8E-06 50.9 18.0 161 15-182 138-328 (355)
306 2ism_A Putative oxidoreductase 95.7 0.84 2.9E-05 46.7 20.2 139 1-142 37-222 (352)
307 2ism_A Putative oxidoreductase 95.6 0.45 1.6E-05 48.7 17.7 178 2-185 82-332 (352)
308 2xbg_A YCF48-like protein; pho 95.5 0.41 1.4E-05 48.3 16.7 143 2-151 170-320 (327)
309 2vpj_A Kelch-like protein 12; 95.4 0.6 2E-05 45.7 17.3 141 5-154 62-232 (301)
310 2xn4_A Kelch-like protein 2; s 95.2 0.54 1.8E-05 46.2 16.4 143 5-154 61-230 (302)
311 3pbp_A Nucleoporin NUP82; beta 95.2 1.9 6.4E-05 46.1 21.0 128 46-178 29-190 (452)
312 3ii7_A Kelch-like protein 7; p 95.2 0.53 1.8E-05 46.3 16.2 143 5-154 55-226 (306)
313 3ei3_A DNA damage-binding prot 95.0 5.9 0.0002 47.4 27.1 148 2-153 469-636 (1158)
314 3a9g_A Putative uncharacterize 94.9 2.8 9.7E-05 42.9 21.4 143 41-185 138-329 (354)
315 1bpo_A Protein (clathrin); cla 94.9 4.9 0.00017 43.1 26.0 147 3-155 74-291 (494)
316 3s25_A Hypothetical 7-bladed b 94.9 1.5 5.1E-05 44.2 18.8 161 2-185 21-201 (302)
317 3a9g_A Putative uncharacterize 94.5 0.85 2.9E-05 46.8 16.2 143 38-185 29-215 (354)
318 2vpj_A Kelch-like protein 12; 94.4 0.45 1.5E-05 46.7 13.1 141 5-154 112-279 (301)
319 2xn4_A Kelch-like protein 2; s 94.3 0.38 1.3E-05 47.3 12.6 144 5-154 108-277 (302)
320 1cru_A Protein (soluble quinop 94.1 1.5 5E-05 46.9 17.4 101 1-101 33-163 (454)
321 1tl2_A L10, protein (tachylect 94.1 0.87 3E-05 44.5 14.0 133 6-148 4-158 (236)
322 4asc_A Kelch repeat and BTB do 94.0 1.1 3.7E-05 44.4 15.1 143 4-154 44-222 (315)
323 1zgk_A Kelch-like ECH-associat 93.9 0.73 2.5E-05 45.6 13.7 140 5-154 70-241 (308)
324 2g8s_A Glucose/sorbosone dehyd 93.8 0.75 2.6E-05 47.1 14.0 111 1-112 24-173 (353)
325 2woz_A Kelch repeat and BTB do 93.7 2 6.9E-05 42.4 16.6 143 4-154 55-232 (318)
326 3das_A Putative oxidoreductase 93.6 1.6 5.4E-05 45.1 15.9 101 1-101 38-159 (347)
327 2zwa_A Leucine carboxyl methyl 93.4 1.9 6.6E-05 48.4 17.6 148 5-155 397-579 (695)
328 4asc_A Kelch repeat and BTB do 93.3 3.2 0.00011 40.9 17.4 139 8-154 7-175 (315)
329 2be1_A Serine/threonine-protei 93.1 0.13 4.4E-06 53.3 6.7 144 6-150 10-181 (339)
330 3ott_A Two-component system se 93.0 14 0.00047 41.3 24.3 163 7-183 74-247 (758)
331 3das_A Putative oxidoreductase 92.7 4.7 0.00016 41.6 17.9 145 38-185 32-219 (347)
332 3ii7_A Kelch-like protein 7; p 92.6 0.94 3.2E-05 44.5 12.1 143 5-154 101-273 (306)
333 1cru_A Protein (soluble quinop 92.3 13 0.00045 39.4 21.5 101 39-141 28-162 (454)
334 2xzh_A Clathrin heavy chain 1; 92.3 4.6 0.00016 41.7 16.8 141 58-210 47-189 (365)
335 1zgk_A Kelch-like ECH-associat 92.1 0.97 3.3E-05 44.7 11.4 142 5-154 121-288 (308)
336 1tl2_A L10, protein (tachylect 91.9 2.4 8.3E-05 41.3 13.4 137 1-146 47-203 (236)
337 2g8s_A Glucose/sorbosone dehyd 91.3 2.5 8.6E-05 43.2 13.9 143 40-185 20-215 (353)
338 2woz_A Kelch repeat and BTB do 91.1 1.5 5.2E-05 43.3 11.7 144 5-154 109-288 (318)
339 2uvk_A YJHT; unknown function, 90.3 2.5 8.5E-05 42.4 12.7 138 16-156 168-345 (357)
340 3ott_A Two-component system se 90.3 26 0.00089 39.0 23.3 166 8-183 114-294 (758)
341 2uvk_A YJHT; unknown function, 90.3 5.2 0.00018 40.0 15.0 92 60-154 168-295 (357)
342 3sbq_A Nitrous-oxide reductase 89.2 30 0.001 38.2 20.6 191 5-210 141-408 (638)
343 2zwa_A Leucine carboxyl methyl 88.9 2 7E-05 48.2 11.6 147 5-154 451-636 (695)
344 1xi4_A Clathrin heavy chain; a 88.7 3.9 0.00013 49.8 14.1 201 2-213 73-292 (1630)
345 1bpo_A Protein (clathrin); cla 87.6 11 0.00039 40.3 15.4 141 58-210 46-188 (494)
346 3sbq_A Nitrous-oxide reductase 86.3 3.8 0.00013 45.2 11.2 102 40-142 325-454 (638)
347 1suu_A DNA gyrase subunit A; t 84.6 35 0.0012 34.2 20.9 200 4-212 6-233 (312)
348 2be1_A Serine/threonine-protei 80.8 3.5 0.00012 42.4 7.8 104 52-155 12-132 (339)
349 3q6k_A 43.2 kDa salivary prote 79.2 64 0.0022 33.5 21.5 164 17-181 124-337 (381)
350 3no0_A DNA gyrase subunit A; D 78.5 53 0.0018 32.2 18.5 145 5-153 79-246 (276)
351 3b7f_A Glycosyl hydrolase, BNR 77.5 63 0.0022 32.6 22.2 139 7-149 23-204 (394)
352 3no0_A DNA gyrase subunit A; D 75.7 63 0.0022 31.7 18.3 143 7-153 36-196 (276)
353 1zi0_A DNA gyrase subunit A; b 75.4 69 0.0023 31.9 20.7 201 4-212 1-228 (307)
354 3uc1_A DNA gyrase subunit A; D 74.3 77 0.0026 32.0 17.7 146 5-153 108-279 (327)
355 3l6v_A GYRA, DNA gyrase subuni 71.1 98 0.0034 31.8 20.5 148 3-152 4-179 (370)
356 1wp5_A Topoisomerase IV; broke 71.1 90 0.0031 31.4 18.7 147 4-153 3-174 (323)
357 3uc1_A DNA gyrase subunit A; D 68.9 1E+02 0.0035 31.1 21.0 114 38-153 96-228 (327)
358 1xi4_A Clathrin heavy chain; a 68.9 22 0.00074 43.5 11.2 141 58-210 46-188 (1630)
359 2wg3_C Hedgehog-interacting pr 65.2 84 0.0029 33.3 14.2 104 82-185 14-156 (463)
360 4gq2_M Nucleoporin NUP120; bet 63.5 95 0.0033 36.0 15.3 37 83-119 237-273 (950)
361 3b7f_A Glycosyl hydrolase, BNR 63.4 1.3E+02 0.0044 30.2 17.5 108 39-150 116-259 (394)
362 2wg3_C Hedgehog-interacting pr 61.4 63 0.0022 34.3 12.3 103 40-142 16-158 (463)
363 4hvt_A Ritya.17583.B, post-pro 53.5 2.8E+02 0.0094 31.0 19.2 174 2-178 137-360 (711)
364 3qhy_B Beta-lactamase inhibito 53.5 1.7E+02 0.0057 28.5 14.0 134 8-154 35-169 (282)
365 3l6v_A GYRA, DNA gyrase subuni 49.1 2.3E+02 0.008 28.9 20.9 145 7-153 58-265 (370)
366 3qhy_B Beta-lactamase inhibito 43.6 2.3E+02 0.008 27.3 14.5 128 15-154 80-208 (282)
367 1suu_A DNA gyrase subunit A; t 43.6 2.5E+02 0.0086 27.7 19.6 101 52-153 116-231 (312)
368 1zi0_A DNA gyrase subunit A; b 36.7 3.2E+02 0.011 26.9 19.5 101 52-153 111-226 (307)
369 3zwu_A Alkaline phosphatase PH 34.1 87 0.003 34.5 8.1 54 2-55 483-548 (592)
370 3zwu_A Alkaline phosphatase PH 33.4 1E+02 0.0035 33.9 8.5 57 84-140 478-548 (592)
371 3kci_A Probable E3 ubiquitin-p 31.7 4.1E+02 0.014 26.6 21.8 144 7-153 63-241 (389)
372 4a9v_A PHOX; hydrolase, beta-p 31.2 1.6E+02 0.0053 32.5 9.4 60 82-141 476-549 (592)
373 4fhn_B Nucleoporin NUP120; pro 31.0 38 0.0013 40.2 4.9 37 83-119 239-275 (1139)
374 1wp5_A Topoisomerase IV; broke 30.6 4.1E+02 0.014 26.4 19.9 146 6-153 50-225 (323)
375 3kci_A Probable E3 ubiquitin-p 28.6 4.6E+02 0.016 26.3 21.6 144 5-153 115-293 (389)
376 3f7f_A Nucleoporin NUP120; nuc 28.1 73 0.0025 36.0 6.2 36 84-121 224-259 (729)
377 1zvt_A Topoisomerase IV subuni 28.0 4.1E+02 0.014 25.5 15.9 143 7-153 3-163 (256)
378 3mez_B Mannose-specific lectin 27.1 2.7E+02 0.0091 23.1 10.3 18 6-23 24-41 (113)
379 1zvt_A Topoisomerase IV subuni 26.0 4.4E+02 0.015 25.2 13.0 101 52-153 4-114 (256)
380 3g1g_A GAG polyprotein, capsid 21.9 9.1 0.00031 31.4 -1.9 50 495-548 11-85 (87)
381 4a9v_A PHOX; hydrolase, beta-p 21.1 2.5E+02 0.0085 30.9 8.6 42 17-58 510-551 (592)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=1.6e-28 Score=248.88 Aligned_cols=197 Identities=12% Similarity=0.133 Sum_probs=171.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++|++++.||.|+|||+.+++.+..+.. |...|.+++|+++++ +|++|+.|++|++||+.+++ .+..+.+|
T Consensus 20 ~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~s~s~d~~i~vwd~~~~~-~~~~~~~h 96 (304)
T 2ynn_A 20 DFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQV-TETPVRAGKFIARKN-WIIVGSDDFRIRVFNYNTGE-KVVDFEAH 96 (304)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGT-EEEEEETTSEEEEEETTTCC-EEEEEECC
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCceeEEeec-cCCcEEEEEEeCCCC-EEEEECCCCEEEEEECCCCc-EEEEEeCC
Confidence 4899999999999999999999999999988886 677899999999998 89999999999999998887 46778999
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCce-eeEe-ecCCCeEEEEEec-CCCEEEEEEcCCeEEEEECCCCCCc
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP-SSCI-TYEAPFSSLAFID-DDWILTAGTSNGRVVFYDIRGKPQP 157 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~-v~~~-~h~~~ItsLafsP-dg~~LasGs~DG~V~VWDlrt~~~~ 157 (568)
...|++++|+|++++|++++.|++|++||++++.. ...+ .|...|.+++|+| ++.+|++|+.|+.|++||++.....
T Consensus 97 ~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~ 176 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS
T ss_pred CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc
Confidence 99999999999999999999999999999998744 3444 6899999999999 6799999999999999999887544
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 158 LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 158 v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
..... +|...|..++|.+. .++.++++++.|+.|++||++...
T Consensus 177 ~~~~~--~~~~~v~~~~~~~~----------~~~~~l~s~s~D~~i~iWd~~~~~ 219 (304)
T 2ynn_A 177 FTLTT--GQERGVNYVDYYPL----------PDKPYMITASDDLTIKIWDYQTKS 219 (304)
T ss_dssp EEEEC--CCTTCEEEEEECCS----------TTCCEEEEEETTSEEEEEETTTTE
T ss_pred ceecc--CCcCcEEEEEEEEc----------CCCCEEEEEcCCCeEEEEeCCCCc
Confidence 44333 57788999999873 244567777889999999987644
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=3e-28 Score=258.08 Aligned_cols=206 Identities=16% Similarity=0.218 Sum_probs=178.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|+++++ +|++|+.|++|++||+.+.+ .+..+.+|
T Consensus 115 ~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~-h~~~V~~v~~~~~~~-~l~sgs~D~~i~iwd~~~~~-~~~~~~~h 191 (410)
T 1vyh_C 115 IFHPVFSVMVSASEDATIKVWDYETGDFERTLKG-HTDSVQDISFDHSGK-LLASCSADMTIKLWDFQGFE-CIRTMHGH 191 (410)
T ss_dssp EECSSSSEEEEEESSSCEEEEETTTCCCCEEECC-CSSCEEEEEECTTSS-EEEEEETTSCCCEEETTSSC-EEECCCCC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-cCCcEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCc-eeEEEcCC
Confidence 4899999999999999999999999999999987 777899999999998 89999999999999998876 46778899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~ 159 (568)
...|.+++|+|++++|++++.|++|++||+++++++..+ .|...|.+++|++++.+|++|+.|+.|++||+++.. ...
T Consensus 192 ~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~-~~~ 270 (410)
T 1vyh_C 192 DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKE-CKA 270 (410)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-EEE
T ss_pred CCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCc-eee
Confidence 999999999999999999999999999999999988777 688899999999999999999999999999999874 334
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEec--------cCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 160 VLRACSSSEAVSSLCWQRAKPVFIDET--------TCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~s--------~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
.+. +|...|.+++|+|++.+..... ....+.++++++.|+.|++||++...
T Consensus 271 ~~~--~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~ 329 (410)
T 1vyh_C 271 ELR--EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGM 329 (410)
T ss_dssp EEC--CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTE
T ss_pred Eec--CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 444 7999999999999754421110 01135678889999999999987643
No 3
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=9.2e-28 Score=242.03 Aligned_cols=195 Identities=19% Similarity=0.265 Sum_probs=171.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++|++++.||.|+||++.+++....+.+ |...|.+++|+|+++ +|++++.|+.|++||+.+.+ .+..+..|
T Consensus 30 ~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~~~d~~i~vwd~~~~~-~~~~~~~~ 106 (312)
T 4ery_A 30 KFSPNGEWLASSSADKLIKIWGAYDGKFEKTISG-HKLGISDVAWSSDSN-LLVSASDDKTLKIWDVSSGK-CLKTLKGH 106 (312)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCC-EEEEEECC
T ss_pred EECCCCCEEEEeeCCCeEEEEeCCCcccchhhcc-CCCceEEEEEcCCCC-EEEEECCCCEEEEEECCCCc-EEEEEcCC
Confidence 4899999999999999999999999998888876 777899999999997 89999999999999998877 46778899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~ 159 (568)
...|.+++|+|++++|++++.|+.|++||+++++.+..+ .|...|.+++|+|++++|++++.||.|++||+++... +.
T Consensus 107 ~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~-~~ 185 (312)
T 4ery_A 107 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQC-LK 185 (312)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-EE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCce-ee
Confidence 999999999999999999999999999999999888777 5888999999999999999999999999999998743 23
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
.+. ..+...+..++|+|+++++++ ++.|+.|++||++...
T Consensus 186 ~~~-~~~~~~~~~~~~~~~~~~l~~------------~~~d~~i~iwd~~~~~ 225 (312)
T 4ery_A 186 TLI-DDDNPPVSFVKFSPNGKYILA------------ATLDNTLKLWDYSKGK 225 (312)
T ss_dssp EEC-CSSCCCEEEEEECTTSSEEEE------------EETTTEEEEEETTTTE
T ss_pred EEe-ccCCCceEEEEECCCCCEEEE------------EcCCCeEEEEECCCCc
Confidence 322 256678999999997665544 4569999999987654
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=6e-28 Score=251.37 Aligned_cols=193 Identities=11% Similarity=0.110 Sum_probs=164.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe--c
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL--K 78 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l--~ 78 (568)
+|+|+|++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|++++..+|++++.|++|++||+++.+. ...+ .
T Consensus 134 ~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~-h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~ 211 (344)
T 4gqb_B 134 SVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRA-HAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP-ASQIGCS 211 (344)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC-EEECC--
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-cCCceEEEEecCCCCCceeeeccccccccccccccce-eeeeecc
Confidence 4899999999999999999999999999999987 7788999999999977899999999999999988774 3333 3
Q ss_pred cCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCC-CEEEEEEcCCeEEEEECCCCC
Q 008356 79 QHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDD-WILTAGTSNGRVVFYDIRGKP 155 (568)
Q Consensus 79 ~H~~~VtslafsP-dg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg-~~LasGs~DG~V~VWDlrt~~ 155 (568)
.|...+++++|+| ++++|++|+.|++|++||+++++++..+ .|...|.+++|+|++ ++|++|+.|+.|+|||+++.+
T Consensus 212 ~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 212 APGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE 291 (344)
T ss_dssp --CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE
T ss_pred eeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc
Confidence 4667799999999 6778999999999999999999988877 689999999999997 689999999999999998762
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 156 ~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
.+...+|.+.|++++|+|+++. ++++++.|+.|++|++..
T Consensus 292 ----~~~~~~H~~~V~~v~~sp~~~~-----------llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 292 ----LFRSQAHRDFVRDATWSPLNHS-----------LLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp ----EEEECCCSSCEEEEEECSSSTT-----------EEEEEETTSCEEEEECCC
T ss_pred ----EEEEcCCCCCEEEEEEeCCCCe-----------EEEEEcCCCeEEEEECCC
Confidence 3344589999999999997543 455567799999999864
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=3.3e-27 Score=242.95 Aligned_cols=194 Identities=14% Similarity=0.215 Sum_probs=169.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC---ceeEEe
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS---PKVSWL 77 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~---~~v~~l 77 (568)
+|+|++++|++|+.||.|+|||+.+++.+..+.. |...|.+++|+|+++ +|++|+.|+.|++||+.... .....+
T Consensus 62 ~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~s~~~d~~v~iw~~~~~~~~~~~~~~~ 139 (340)
T 1got_B 62 HWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPL-RSSWVMTCAYAPSGN-YVACGGLDNICSIYNLKTREGNVRVSREL 139 (340)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-SSSCEEEEEECTTSS-EEEEEETTCEEEEEETTTCSBSCEEEEEE
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCCcceEeec-CCccEEEEEECCCCC-EEEEEeCCCeEEEEECccCCCcceeEEEe
Confidence 4899999999999999999999999999888886 677889999999998 89999999999999997653 235567
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCC
Q 008356 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (568)
Q Consensus 78 ~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~ 156 (568)
.+|...|.++.|++++. |++++.|++|++||+++++.+..+ .|...|.+++|+|++++|++|+.|+.|++||++...
T Consensus 140 ~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~- 217 (340)
T 1got_B 140 AGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM- 217 (340)
T ss_dssp ECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS-
T ss_pred cCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe-
Confidence 89999999999998664 899999999999999999988777 589999999999999999999999999999999873
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 157 ~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
....+. +|...|++++|+|++++|+ +++.|+.|++||++...
T Consensus 218 ~~~~~~--~h~~~v~~v~~~p~~~~l~------------s~s~d~~v~iwd~~~~~ 259 (340)
T 1got_B 218 CRQTFT--GHESDINAICFFPNGNAFA------------TGSDDATCRLFDLRADQ 259 (340)
T ss_dssp EEEEEC--CCSSCEEEEEECTTSSEEE------------EEETTSCEEEEETTTTE
T ss_pred eEEEEc--CCcCCEEEEEEcCCCCEEE------------EEcCCCcEEEEECCCCc
Confidence 444444 7999999999999765554 44669999999997644
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=1.9e-27 Score=241.06 Aligned_cols=199 Identities=14% Similarity=0.236 Sum_probs=172.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|++++++|++|+.|+.|++||+.+++.+..+.+ |...|.+++|+|+++ +|++|+.|++|++||+.........+.+|
T Consensus 62 ~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~~h 139 (304)
T 2ynn_A 62 KFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGH 139 (304)
T ss_dssp EEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEEEEEECCC
T ss_pred EEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeC-CCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcchhhhhccc
Confidence 3789999999999999999999999999999987 778899999999998 89999999999999998876566788999
Q ss_pred CCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCceeeEe--ecCCCeEEEEEec--CCCEEEEEEcCCeEEEEECCCCC
Q 008356 81 SAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFID--DDWILTAGTSNGRVVFYDIRGKP 155 (568)
Q Consensus 81 ~~~VtslafsP-dg~~LaSgs~DGtV~IWDlrt~~~v~~~--~h~~~ItsLafsP--dg~~LasGs~DG~V~VWDlrt~~ 155 (568)
...|++++|+| ++.+|++|+.|++|++||+++......+ .+...+..++|.| ++.+|++|+.|+.|+|||+++..
T Consensus 140 ~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~ 219 (304)
T 2ynn_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (304)
T ss_dssp CSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTE
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCc
Confidence 99999999999 7899999999999999999987766555 4667899999987 67899999999999999999873
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCcccc
Q 008356 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (568)
Q Consensus 156 ~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~~s 216 (568)
++..+. +|...|.+++|+|++++ |++++.|+.|++||++.......
T Consensus 220 -~~~~~~--~h~~~v~~~~~~p~~~~------------l~s~s~Dg~i~iWd~~~~~~~~~ 265 (304)
T 2ynn_A 220 -CVATLE--GHMSNVSFAVFHPTLPI------------IISGSEDGTLKIWNSSTYKVEKT 265 (304)
T ss_dssp -EEEEEE--CCSSCEEEEEECSSSSE------------EEEEETTSCEEEEETTTCCEEEE
T ss_pred -cceeeC--CCCCCEEEEEECCCCCE------------EEEEcCCCeEEEEECCCCceeee
Confidence 445555 89999999999997654 45556799999999987665443
No 7
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=3e-27 Score=242.54 Aligned_cols=190 Identities=17% Similarity=0.272 Sum_probs=170.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++|++|+.||.|++||+++++....+.. +...|.+++|+|+++ +|++|+.||.|++||+.+++ .+..+.+|
T Consensus 129 ~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~-~~~~v~~~~~spdg~-~lasg~~dg~i~iwd~~~~~-~~~~~~~h 205 (321)
T 3ow8_A 129 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDT-RGKFILSIAYSPDGK-YLASGAIDGIINIFDIATGK-LLHTLEGH 205 (321)
T ss_dssp EECTTSSEEEEECTTSEEEEEETTTCSEEEEEEC-SSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE-EEEEECCC
T ss_pred EECCCCCEEEEEcCCCcEEEEEcCCCceeEEecC-CCceEEEEEECCCCC-EEEEEcCCCeEEEEECCCCc-EEEEEccc
Confidence 4899999999999999999999999998888876 667889999999998 89999999999999998876 46778999
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~ 159 (568)
...|++++|+|++++|++++.|+.|++||+++++.+..+ .|...|.+++|+|++.+|++++.|+.|+|||+++.. ++.
T Consensus 206 ~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~-~~~ 284 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT-CVH 284 (321)
T ss_dssp SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE-EEE
T ss_pred CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE-EEE
Confidence 999999999999999999999999999999999888777 688999999999999999999999999999999873 344
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCC
Q 008356 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (568)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDl 208 (568)
.+. +|...|.+++|+|++++| ++++.|+.|++||+
T Consensus 285 ~~~--~h~~~v~~v~~s~~g~~l------------~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 285 TFF--DHQDQVWGVKYNGNGSKI------------VSVGDDQEIHIYDC 319 (321)
T ss_dssp EEC--CCSSCEEEEEECTTSSEE------------EEEETTCCEEEEEC
T ss_pred EEc--CCCCcEEEEEECCCCCEE------------EEEeCCCeEEEEeC
Confidence 444 799999999999976554 44466999999996
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=9.9e-27 Score=237.61 Aligned_cols=201 Identities=15% Similarity=0.264 Sum_probs=172.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++|++|+.|++|+|||+.+++.+..+.+ |...|.+++|++++. +|++|+.|++|++||++... +..+.+|
T Consensus 72 ~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~~~--~~~~~~h 147 (319)
T 3frx_A 72 TLTADGAYALSASWDKTLRLWDVATGETYQRFVG-HKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKGQC--LATLLGH 147 (319)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSC-EEEEEETTSCEEEEETTSCE--EEEECCC
T ss_pred EECCCCCEEEEEeCCCEEEEEECCCCCeeEEEcc-CCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCe--EEEEecc
Confidence 4789999999999999999999999999999987 777899999999998 89999999999999997653 6778899
Q ss_pred CCCeEEEEEcCC------CCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 008356 81 SAPTAGISFSSD------DKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 81 ~~~VtslafsPd------g~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt 153 (568)
...|.++.|.|. +.+|++++.|+.|++||+++.+....+ .|...|.+++|+|++++|++|+.||.|+|||++.
T Consensus 148 ~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 148 NDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp SSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred CCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 999999999984 458999999999999999998877666 7999999999999999999999999999999998
Q ss_pred CCCceEEEeecCCCCCeeEEEEccCCCeEEEecc-------------------------------------CCCCeEEEE
Q 008356 154 KPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETT-------------------------------------CKAETALLG 196 (568)
Q Consensus 154 ~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~-------------------------------------ssd~~~Lls 196 (568)
.+ .+..+. +...|.+++|+|++.+++++.. ..++.+|++
T Consensus 228 ~~-~~~~~~---~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~s 303 (319)
T 3frx_A 228 KK-AMYTLS---AQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFA 303 (319)
T ss_dssp TE-EEEEEE---CCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEE
T ss_pred Cc-EEEEec---CCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEE
Confidence 73 334443 4578999999999988765421 235566777
Q ss_pred ecCCCcEEcCCCC
Q 008356 197 GAVGDSILMPDPL 209 (568)
Q Consensus 197 ~s~Dg~V~VWDlr 209 (568)
++.|+.|++||+.
T Consensus 304 g~~Dg~i~vWd~~ 316 (319)
T 3frx_A 304 GYTDNVIRVWQVM 316 (319)
T ss_dssp EETTSCEEEEEEE
T ss_pred eecCceEEEEEEe
Confidence 7778888888764
No 9
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.95 E-value=7.9e-27 Score=242.90 Aligned_cols=194 Identities=18% Similarity=0.217 Sum_probs=161.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEee---CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELK---DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~---~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l 77 (568)
+|+++ ++|++|+.||.|+|||+.+++.+..++ ..|...|++|+|+|+++ +|++|+.|++|++||+.+++ .+..+
T Consensus 89 ~~s~d-~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~-~l~sgs~d~~i~iwd~~~~~-~~~~~ 165 (344)
T 4gqb_B 89 TWVGE-RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT-QAVSGSKDICIKVWDLAQQV-VLSSY 165 (344)
T ss_dssp EEETT-TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE-EEEEE
T ss_pred EEeCC-CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCCCc-EEEEE
Confidence 37787 478899999999999999887654332 24788999999999998 89999999999999999877 47788
Q ss_pred ccCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEECCCCceeeEe---ecCCCeEEEEEecC-CCEEEEEEcCCeEEEEECC
Q 008356 78 KQHSAPTAGISFSSDD-KIIASVGLDKKLYTYDPGSRRPSSCI---TYEAPFSSLAFIDD-DWILTAGTSNGRVVFYDIR 152 (568)
Q Consensus 78 ~~H~~~VtslafsPdg-~~LaSgs~DGtV~IWDlrt~~~v~~~---~h~~~ItsLafsPd-g~~LasGs~DG~V~VWDlr 152 (568)
.+|...|++++|++++ .+|++++.|++|++||+++++++..+ .+...+.+++|+|+ +++|++|+.||.|+|||++
T Consensus 166 ~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~ 245 (344)
T 4gqb_B 166 RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK 245 (344)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC
T ss_pred cCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC
Confidence 9999999999999976 57899999999999999999887766 35567999999994 6789999999999999999
Q ss_pred CCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCC
Q 008356 153 GKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (568)
Q Consensus 153 t~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~ 211 (568)
+.+ ++..+. +|...|++++|+|++. .+|++++.|+.|++||++..
T Consensus 246 ~~~-~~~~~~--~h~~~v~~v~fsp~g~-----------~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 246 STS-CVLSSA--VHSQCVTGLVFSPHSV-----------PFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp C---CCEEEE--CCSSCEEEEEECSSSS-----------CCEEEEETTSCEEEECTTCC
T ss_pred CCc-EEEEEc--CCCCCEEEEEEccCCC-----------eEEEEEeCCCeEEEEECCCC
Confidence 874 455555 7999999999999752 33555577999999998653
No 10
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=6.3e-27 Score=248.94 Aligned_cols=201 Identities=12% Similarity=0.105 Sum_probs=160.5
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEee-CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe-
Q 008356 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELK-DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL- 77 (568)
Q Consensus 1 afSp-dG~~LasGs~DG~V~VWDl~tg~~v~~l~-~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l- 77 (568)
+|+| ++++||+|+.||.|+|||+.+++....+. ..|...|++|+|+|.+.++|++|+.||+|+|||+++... ....
T Consensus 126 ~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~ 204 (435)
T 4e54_B 126 AWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL-RVFAS 204 (435)
T ss_dssp EECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE-EEEEC
T ss_pred EEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce-eEEec
Confidence 4888 56799999999999999998776554443 237788999999985444899999999999999987652 2222
Q ss_pred -ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCC-EEEEEEcCCeEEEEECCCCC
Q 008356 78 -KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDW-ILTAGTSNGRVVFYDIRGKP 155 (568)
Q Consensus 78 -~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~-~LasGs~DG~V~VWDlrt~~ 155 (568)
..+...+.+++|+|++++|++|+.||.|++||++.........|...|.+++|+|++. +|++|+.|+.|+|||++...
T Consensus 205 ~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~ 284 (435)
T 4e54_B 205 SDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVR 284 (435)
T ss_dssp CSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCC
T ss_pred cCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccccc
Confidence 2334568899999999999999999999999998655444447899999999999875 78899999999999999865
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCcc
Q 008356 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (568)
Q Consensus 156 ~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~ 214 (568)
.........+|...|++++|+|+|++|+ +++.|+.|++||++.....
T Consensus 285 ~~~~~~~~~~h~~~v~~~~~spdg~~l~------------s~~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 285 GKASFLYSLPHRHPVNAACFSPDGARLL------------TTDQKSEIRVYSASQWDCP 331 (435)
T ss_dssp SSSCCSBCCBCSSCEEECCBCTTSSEEE------------EEESSSCEEEEESSSSSSE
T ss_pred ccceEEEeeeccccccceeECCCCCeeE------------EEcCCCEEEEEECCCCccc
Confidence 4444444457999999999999766554 4466999999999876543
No 11
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=1.8e-26 Score=244.43 Aligned_cols=191 Identities=14% Similarity=0.245 Sum_probs=169.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++|++|+.|+.|++||+.+++++..+.+ |...|.++.|++++. +|++|+.|+.|++||+.+... ...+..|
T Consensus 199 ~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~~~-~~~~~~h 275 (410)
T 1vyh_C 199 SIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTG-HREWVRMVRPNQDGT-LIASCSNDQTVRVWVVATKEC-KAELREH 275 (410)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCE-EEEECCC
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeC-CCccEEEEEECCCCC-EEEEEcCCCeEEEEECCCCce-eeEecCC
Confidence 4789999999999999999999999999999987 777899999999998 899999999999999988764 6678899
Q ss_pred CCCeEEEEEcCC--------------------CCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEE
Q 008356 81 SAPTAGISFSSD--------------------DKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTA 139 (568)
Q Consensus 81 ~~~VtslafsPd--------------------g~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~Las 139 (568)
...|.+++|+|+ +.+|++|+.|+.|++||+++++++..+ .|...|.+++|+|++++|++
T Consensus 276 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s 355 (410)
T 1vyh_C 276 RHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILS 355 (410)
T ss_dssp SSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEE
T ss_pred CceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEE
Confidence 999999999995 678999999999999999999888777 68999999999999999999
Q ss_pred EEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 140 GTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 140 Gs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
|+.||.|++||+++.. .+..+. +|...|++++|+|++++|++ ++.|+.|++||+|
T Consensus 356 ~s~D~~i~vwd~~~~~-~~~~~~--~h~~~v~~l~~~~~~~~l~s------------gs~D~~i~vW~~r 410 (410)
T 1vyh_C 356 CADDKTLRVWDYKNKR-CMKTLN--AHEHFVTSLDFHKTAPYVVT------------GSVDQTVKVWECR 410 (410)
T ss_dssp EETTTEEEEECCTTSC-CCEEEE--CCSSCEEEEEECSSSSCEEE------------EETTSEEEEEC--
T ss_pred EeCCCeEEEEECCCCc-eEEEEc--CCCCcEEEEEEcCCCCEEEE------------EeCCCcEEEEeCC
Confidence 9999999999998774 455565 79999999999997666554 4669999999975
No 12
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=2.2e-26 Score=236.83 Aligned_cols=187 Identities=15% Similarity=0.185 Sum_probs=164.3
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~ 81 (568)
|++++ .|++++.|+.|++||+.+++.+..+.+ |...|.+++|+|+++ +|++|+.|+.|++||+.+.. ....+.+|.
T Consensus 151 ~~~~~-~l~s~s~d~~i~~wd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~-~~~~~~~h~ 226 (340)
T 1got_B 151 FLDDN-QIVTSSGDTTCALWDIETGQQTTTFTG-HTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREGM-CRQTFTGHE 226 (340)
T ss_dssp EEETT-EEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCS-EEEEECCCS
T ss_pred ECCCC-cEEEEECCCcEEEEECCCCcEEEEEcC-CCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCCe-eEEEEcCCc
Confidence 44444 588999999999999999999988886 777899999999997 89999999999999998876 467788999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecC---CCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce
Q 008356 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYE---APFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (568)
Q Consensus 82 ~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~---~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v 158 (568)
..|++++|+|++++|++++.|++|++||+++++.+..+.+. ..|.+++|+|++++|++|+.|+.|++||+.... ..
T Consensus 227 ~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~-~~ 305 (340)
T 1got_B 227 SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKAD-RA 305 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC-EE
T ss_pred CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCc-Ee
Confidence 99999999999999999999999999999998887777544 479999999999999999999999999998864 44
Q ss_pred EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCC
Q 008356 159 TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (568)
Q Consensus 159 ~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWD 207 (568)
..+. +|...|.+++|+|++++|+++ +.|+.|++||
T Consensus 306 ~~~~--~h~~~v~~~~~s~dg~~l~s~------------s~D~~i~iWd 340 (340)
T 1got_B 306 GVLA--GHDNRVSCLGVTDDGMAVATG------------SWDSFLKIWN 340 (340)
T ss_dssp EEEE--CCSSCEEEEEECTTSSCEEEE------------ETTSCEEEEC
T ss_pred eEee--cCCCcEEEEEEcCCCCEEEEE------------cCCccEEecC
Confidence 5555 899999999999987665554 6699999997
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=2.3e-26 Score=238.83 Aligned_cols=195 Identities=14% Similarity=0.151 Sum_probs=169.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC-----ceeE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS-----PKVS 75 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~-----~~v~ 75 (568)
+|+|++++|++|+.||+|+|||..+++....+.. +...|.+++|+|++. +|++|+.|+.+++|++.... ....
T Consensus 71 ~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~-~~~~v~~~~~sp~g~-~lasg~~d~~i~v~~~~~~~~~~~~~~~~ 148 (354)
T 2pbi_B 71 DWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTM-PCTWVMACAYAPSGC-AIACGGLDNKCSVYPLTFDKNENMAAKKK 148 (354)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-SSSCCCEEEECTTSS-EEEEESTTSEEEEEECCCCTTCCSGGGCE
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCCcceEEec-CCCCEEEEEECCCCC-EEEEeeCCCCEEEEEEeccccccccccce
Confidence 4899999999999999999999999998888876 566788899999998 89999999999999985431 2355
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEec--CCCEEEEEEcCCeEEEEECC
Q 008356 76 WLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFID--DDWILTAGTSNGRVVFYDIR 152 (568)
Q Consensus 76 ~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsP--dg~~LasGs~DG~V~VWDlr 152 (568)
.+..|...|.++.|+|++..|++++.|++|++||+++++++..+ .|...|.+++|+| ++++|++|+.||.|++||++
T Consensus 149 ~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~ 228 (354)
T 2pbi_B 149 SVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMR 228 (354)
T ss_dssp EEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETT
T ss_pred eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECC
Confidence 67789999999999999999999999999999999999988877 5889999999988 57899999999999999999
Q ss_pred CCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 153 GKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 153 t~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
+.. ++..+. .|...|++++|+|++.+| ++++.|+.|++||++...
T Consensus 229 ~~~-~~~~~~--~h~~~v~~v~~~p~~~~l------------~s~s~D~~v~lwd~~~~~ 273 (354)
T 2pbi_B 229 SGQ-CVQAFE--THESDVNSVRYYPSGDAF------------ASGSDDATCRLYDLRADR 273 (354)
T ss_dssp TCC-EEEEEC--CCSSCEEEEEECTTSSEE------------EEEETTSCEEEEETTTTE
T ss_pred CCc-EEEEec--CCCCCeEEEEEeCCCCEE------------EEEeCCCeEEEEECCCCc
Confidence 874 445554 799999999999976554 445679999999997643
No 14
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=6e-26 Score=233.52 Aligned_cols=189 Identities=16% Similarity=0.171 Sum_probs=158.3
Q ss_pred cC-CCCEEEEEECCCcEEEEECCCC-------ceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee
Q 008356 3 NC-KDEHLASISLSGDLILHNLASG-------AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (568)
Q Consensus 3 Sp-dG~~LasGs~DG~V~VWDl~tg-------~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v 74 (568)
++ ++++|++|+.|++|+|||+.++ .....+.+ |...|.+++|++++. ++++|+.|++|++||+.+++ .+
T Consensus 35 ~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~-h~~~V~~~~~~~~~~-~l~s~s~D~~v~lwd~~~~~-~~ 111 (343)
T 2xzm_R 35 ENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTG-HNHFVSDLALSQENC-FAISSSWDKTLRLWDLRTGT-TY 111 (343)
T ss_dssp TTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECC-CSSCEEEEEECSSTT-EEEEEETTSEEEEEETTSSC-EE
T ss_pred cCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhcc-CCCceEEEEECCCCC-EEEEEcCCCcEEEEECCCCc-EE
Confidence 44 8999999999999999998753 34455665 778899999999998 89999999999999998876 46
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe---ecCCCeEEEEEecCC----------CEEEEEE
Q 008356 75 SWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI---TYEAPFSSLAFIDDD----------WILTAGT 141 (568)
Q Consensus 75 ~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~---~h~~~ItsLafsPdg----------~~LasGs 141 (568)
..+.+|...|++++|+|++++|++++.|++|++||+......... .|...|.+++|+|++ .+|++++
T Consensus 112 ~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~ 191 (343)
T 2xzm_R 112 KRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG 191 (343)
T ss_dssp EEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE
T ss_pred EEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEc
Confidence 778899999999999999999999999999999999854433333 577889999999986 7999999
Q ss_pred cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 142 SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 142 ~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
.|+.|++||.+. +....+. +|...|.+++|+|+|++|+++ +.|+.|++||++.
T Consensus 192 ~d~~i~iwd~~~--~~~~~~~--~h~~~v~~~~~s~~g~~l~sg------------s~dg~v~iwd~~~ 244 (343)
T 2xzm_R 192 WDGRLKVWNTNF--QIRYTFK--AHESNVNHLSISPNGKYIATG------------GKDKKLLIWDILN 244 (343)
T ss_dssp TTSEEEEEETTT--EEEEEEE--CCSSCEEEEEECTTSSEEEEE------------ETTCEEEEEESSC
T ss_pred CCCEEEEEcCCC--ceeEEEc--CccccceEEEECCCCCEEEEE------------cCCCeEEEEECCC
Confidence 999999999543 2333444 799999999999977665554 6699999999854
No 15
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=1e-26 Score=241.98 Aligned_cols=195 Identities=12% Similarity=0.156 Sum_probs=166.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee-EEecc
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV-SWLKQ 79 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v-~~l~~ 79 (568)
+|+|++++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|+++++.++++++.||.|++||+++.+... .....
T Consensus 146 ~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~-h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~ 224 (357)
T 4g56_B 146 SVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNA-HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCA 224 (357)
T ss_dssp EECSSSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTT
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcC-CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeecc
Confidence 4899999999999999999999999999999987 778899999999987789999999999999998776432 23456
Q ss_pred CCCCeEEEEEcCC-CCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCC-CEEEEEEcCCeEEEEECCCCCC
Q 008356 80 HSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDD-WILTAGTSNGRVVFYDIRGKPQ 156 (568)
Q Consensus 80 H~~~VtslafsPd-g~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg-~~LasGs~DG~V~VWDlrt~~~ 156 (568)
|...|++++|+|+ +.+|++++.|+.|++||+++++++..+ .|...|.+++|+|++ ++|++|+.|+.|+|||+++.
T Consensus 225 ~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-- 302 (357)
T 4g56_B 225 SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-- 302 (357)
T ss_dssp CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC--
T ss_pred ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC--
Confidence 7788999999995 678999999999999999999888777 688999999999987 68999999999999999886
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCC
Q 008356 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (568)
Q Consensus 157 ~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~ 211 (568)
+.+...+|.+.|++++|+|. ++.+|++++.|+.|++||+...
T Consensus 303 --~~~~~~~H~~~V~~vafsP~-----------d~~~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 303 --EVFRDLSHRDFVTGVAWSPL-----------DHSKFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp --EEEEECCCSSCEEEEEECSS-----------STTEEEEEETTSCEEEEECC--
T ss_pred --cEeEECCCCCCEEEEEEeCC-----------CCCEEEEEcCCCeEEEEECCCC
Confidence 23344589999999999983 2334555677999999998653
No 16
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.95 E-value=1.4e-26 Score=239.18 Aligned_cols=195 Identities=13% Similarity=0.192 Sum_probs=163.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeE--EeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC-ceeEEe
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAA--ELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS-PKVSWL 77 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~--~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~-~~v~~l 77 (568)
+|+|+|++||+|+.|+.|+|||+.++.... .+...|...|.+++|+|+++ +|++|+.|+.|+|||+.... ..+..+
T Consensus 23 ~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~-~l~s~s~D~~v~iw~~~~~~~~~~~~~ 101 (345)
T 3fm0_A 23 AWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGN-YLASASFDATTCIWKKNQDDFECVTTL 101 (345)
T ss_dssp EECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECCC-EEEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCC-EEEEEECCCcEEEEEccCCCeEEEEEc
Confidence 489999999999999999999998776432 33345888999999999998 89999999999999997664 236678
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCce---eeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 008356 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP---SSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 78 ~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~---v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt 153 (568)
.+|...|++++|+|++++|++++.|++|++||++++.. +..+ .|...|.+++|+|++++|++++.|+.|++||++.
T Consensus 102 ~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~ 181 (345)
T 3fm0_A 102 EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEE 181 (345)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEET
T ss_pred cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecC
Confidence 89999999999999999999999999999999987643 3333 5888999999999999999999999999999987
Q ss_pred CCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 154 KPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 154 ~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
.. ........+|...|++++|+|++++|++ ++.|+.|++||++
T Consensus 182 ~~-~~~~~~~~~h~~~v~~l~~sp~g~~l~s------------~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 182 DD-WVCCATLEGHESTVWSLAFDPSGQRLAS------------CSDDRTVRIWRQY 224 (345)
T ss_dssp TE-EEEEEEECCCSSCEEEEEECTTSSEEEE------------EETTSCEEEEEEE
T ss_pred CC-EEEEEEecCCCCceEEEEECCCCCEEEE------------EeCCCeEEEeccc
Confidence 53 1222233489999999999997665544 4669999999964
No 17
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.95 E-value=1.8e-26 Score=236.68 Aligned_cols=195 Identities=18% Similarity=0.237 Sum_probs=171.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|++++.++++++.|+.|++||+.+++.+..+.. +...+.+++|+|+++ +|++++.||.|++||+..... ...+..|
T Consensus 87 ~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~-~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~~~~-~~~~~~~ 163 (321)
T 3ow8_A 87 DISHTLPIAASSSLDAHIRLWDLENGKQIKSIDA-GPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVESGKK-EYSLDTR 163 (321)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CTTCCCCEEECTTSS-EEEEECTTSEEEEEETTTCSE-EEEEECS
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeC-CCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCCCce-eEEecCC
Confidence 3688999999999999999999999999988886 555677899999998 899999999999999988774 5667889
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~ 159 (568)
...|.+++|+|++++|++++.|+.|++||+++++.+..+ .|...|.+++|+|++++|++|+.|+.|+|||++... ...
T Consensus 164 ~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~-~~~ 242 (321)
T 3ow8_A 164 GKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN-LAG 242 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC-EEE
T ss_pred CceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc-eeE
Confidence 999999999999999999999999999999999988877 588899999999999999999999999999999874 344
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
.+. +|...|.+++|+|++++| ++++.|+.|++||++....
T Consensus 243 ~~~--~h~~~v~~~~~sp~~~~l------------~s~s~D~~v~iwd~~~~~~ 282 (321)
T 3ow8_A 243 TLS--GHASWVLNVAFCPDDTHF------------VSSSSDKSVKVWDVGTRTC 282 (321)
T ss_dssp EEC--CCSSCEEEEEECTTSSEE------------EEEETTSCEEEEETTTTEE
T ss_pred EEc--CCCCceEEEEECCCCCEE------------EEEeCCCcEEEEeCCCCEE
Confidence 444 899999999999976554 4456799999999976543
No 18
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.95 E-value=1.1e-26 Score=242.87 Aligned_cols=197 Identities=15% Similarity=0.193 Sum_probs=170.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC------cee
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS------PKV 74 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~------~~v 74 (568)
+|+|++++|++|+.||+|+|||+.+++....+.. |...|.+++|+|+++ +|++|+.|+.|++||+.... ...
T Consensus 73 ~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~-h~~~v~~~~~s~~g~-~las~~~d~~v~iw~~~~~~~~~~~~~~~ 150 (380)
T 3iz6_a 73 DWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKL-HCPWVMECAFAPNGQ-SVACGGLDSACSIFNLSSQADRDGNMPVS 150 (380)
T ss_dssp EECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC-CCTTCCCCEECTTSS-EEEECCSSSCCEEEECCCCSSCCCSSTTC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCccceEEec-CCCCEEEEEECCCCC-EEEEeeCCCcEEEEECCCCccccCCccce
Confidence 4899999999999999999999999999999987 667788899999998 89999999999999996432 224
Q ss_pred EEeccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEECCCCceeeEe------ecCCCeEEEEEec-CCCEEEEEEcCCeE
Q 008356 75 SWLKQHSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCI------TYEAPFSSLAFID-DDWILTAGTSNGRV 146 (568)
Q Consensus 75 ~~l~~H~~~VtslafsPd-g~~LaSgs~DGtV~IWDlrt~~~v~~~------~h~~~ItsLafsP-dg~~LasGs~DG~V 146 (568)
..+.+|...|.++.|.|+ +..|++++.|++|++||+++++.+..+ .|...|.+++|++ ++++|++|+.|+.|
T Consensus 151 ~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v 230 (380)
T 3iz6_a 151 RVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTV 230 (380)
T ss_dssp CBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCE
T ss_pred eeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeE
Confidence 567899999999999995 567999999999999999999887765 4778899999987 78999999999999
Q ss_pred EEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 147 VFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 147 ~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
++||++.....+..+. +|.+.|.+++|+|++++| ++++.|+.|++||++....
T Consensus 231 ~~wd~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~l------------~s~s~D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 231 RLWDLRITSRAVRTYH--GHEGDINSVKFFPDGQRF------------GTGSDDGTCRLFDMRTGHQ 283 (380)
T ss_dssp EEEETTTTCCCCEEEC--CCSSCCCEEEECTTSSEE------------EEECSSSCEEEEETTTTEE
T ss_pred EEEECCCCCcceEEEC--CcCCCeEEEEEecCCCeE------------EEEcCCCeEEEEECCCCcE
Confidence 9999986555666665 899999999999976555 4456799999999987543
No 19
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=6.9e-26 Score=235.28 Aligned_cols=190 Identities=17% Similarity=0.210 Sum_probs=165.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCC-CeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNS-RHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg-~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~ 79 (568)
+|++++++|++++.||+|++||+++++.+..+.+ |...|.+++|+++. .++|++|+.||.|++||+++++. +..+..
T Consensus 161 ~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~-~~~~~~ 238 (354)
T 2pbi_B 161 SFTNSDMQILTASGDGTCALWDVESGQLLQSFHG-HGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC-VQAFET 238 (354)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCE-EEEECC
T ss_pred EEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcC-CCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcE-EEEecC
Confidence 3789999999999999999999999999999987 66788999998852 24899999999999999988874 677889
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeec---CCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCC
Q 008356 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY---EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (568)
Q Consensus 80 H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h---~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~ 156 (568)
|...|++++|+|++++|++++.|++|++||++.++.+..+.. ...+.+++|+|++++|++|+.|+.|+|||++...
T Consensus 239 h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~- 317 (354)
T 2pbi_B 239 HESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS- 317 (354)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS-
T ss_pred CCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc-
Confidence 999999999999999999999999999999999887766643 3468999999999999999999999999998774
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCC
Q 008356 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (568)
Q Consensus 157 ~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWD 207 (568)
.+..+. +|...|++++|+|++++|+++ +.|+.|++|+
T Consensus 318 ~~~~l~--~h~~~v~~l~~spdg~~l~sg------------s~D~~v~vW~ 354 (354)
T 2pbi_B 318 RVSILF--GHENRVSTLRVSPDGTAFCSG------------SWDHTLRVWA 354 (354)
T ss_dssp EEEEEC--CCSSCEEEEEECTTSSCEEEE------------ETTSEEEEEC
T ss_pred eEEEEE--CCCCcEEEEEECCCCCEEEEE------------cCCCCEEecC
Confidence 344444 899999999999987666555 5699999996
No 20
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=7.6e-26 Score=228.44 Aligned_cols=199 Identities=11% Similarity=0.167 Sum_probs=163.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCC--CceeEEeeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ceeE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLAS--GAKAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKVS 75 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~t--g~~v~~l~~~h~~~Vs~Lafspd--g~~lLaTgs~DGtV~VWDl~t~~-~~v~ 75 (568)
+|+|+|++||+|+.|+.|+|||+.. .+.+..+.+ |...|.+++|+++ ++ +|++|+.|++|+|||+.++. ..+.
T Consensus 16 ~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~g-H~~~V~~v~~s~~~~g~-~l~s~s~D~~v~iWd~~~~~~~~~~ 93 (297)
T 2pm7_B 16 VMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGT-ILASCSYDGKVMIWKEENGRWSQIA 93 (297)
T ss_dssp EECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECC-CSSCEEEEEECCGGGCS-EEEEEETTTEEEEEEBSSSCBCCCE
T ss_pred EECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEcc-ccCCeEEEEecCCCcCC-EEEEEcCCCEEEEEEcCCCceEEEE
Confidence 4899999999999999999999974 356778876 7788999999864 55 89999999999999998764 2355
Q ss_pred EeccCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEECCCCce---eeEeecCCCeEEEEEecC-------------CCEE
Q 008356 76 WLKQHSAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRP---SSCITYEAPFSSLAFIDD-------------DWIL 137 (568)
Q Consensus 76 ~l~~H~~~VtslafsPd--g~~LaSgs~DGtV~IWDlrt~~~---v~~~~h~~~ItsLafsPd-------------g~~L 137 (568)
.+..|...|++++|+|+ +.+|++++.|+.|++||++++.. .....|...|.+++|+|+ +++|
T Consensus 94 ~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l 173 (297)
T 2pm7_B 94 VHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (297)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEE
T ss_pred EeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceE
Confidence 67889999999999996 89999999999999999987632 223368899999999996 5799
Q ss_pred EEEEcCCeEEEEECCCCCCceEEE-eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 138 TAGTSNGRVVFYDIRGKPQPLTVL-RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 138 asGs~DG~V~VWDlrt~~~~v~~l-~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
++|+.|+.|+|||++......... ...+|...|.+++|+|++ ..+.+|++++.|+.|++||++.
T Consensus 174 ~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~---------~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 174 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV---------LLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC---------SSSEEEEEEETTSCEEEEEESS
T ss_pred EEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCC---------CCceEEEEEECCCcEEEEEeCC
Confidence 999999999999998764322221 233899999999999963 1245677778899999999865
No 21
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.95 E-value=3.7e-25 Score=229.00 Aligned_cols=201 Identities=11% Similarity=0.125 Sum_probs=165.1
Q ss_pred CccCCC-CEEEEEECCCcEEEEECCCCceeEEeeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec
Q 008356 1 MYNCKD-EHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (568)
Q Consensus 1 afSpdG-~~LasGs~DG~V~VWDl~tg~~v~~l~~-~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~ 78 (568)
+|+|++ ++|++|+.||.|+|||+.+++....+.. .|...|.+++|+|++..+|++++.|+.|++||+.+.. ...+.
T Consensus 80 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~--~~~~~ 157 (383)
T 3ei3_B 80 EWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV--IQVFA 157 (383)
T ss_dssp EECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCE--EEEEE
T ss_pred EECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc--eEEEe
Confidence 488999 9999999999999999998888777763 4788999999999544589999999999999998643 44444
Q ss_pred c---CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCC-EEEEEEcCCeEEEEECCC
Q 008356 79 Q---HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDW-ILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 79 ~---H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~-~LasGs~DG~V~VWDlrt 153 (568)
. |...|.+++|+|++++|++++.|+.|++||++ ++.+..+ .|...|.+++|+|+++ +|++++.|+.|++||++.
T Consensus 158 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~ 236 (383)
T 3ei3_B 158 KTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRN 236 (383)
T ss_dssp CCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGG
T ss_pred ccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCC
Confidence 3 44889999999999999999999999999995 5555555 6899999999999998 999999999999999997
Q ss_pred CCCceEEEeecCCCCCeeEEEEcc-CCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCcccc
Q 008356 154 KPQPLTVLRACSSSEAVSSLCWQR-AKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (568)
Q Consensus 154 ~~~~v~~l~~~~h~~~VtsLafsp-dg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~~s 216 (568)
.......+...+|...|.+++|+| ++++|+++ +.|+.|++||++.......
T Consensus 237 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~------------~~d~~i~iwd~~~~~~~~~ 288 (383)
T 3ei3_B 237 IKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTT------------DQRNEIRVYSSYDWSKPDQ 288 (383)
T ss_dssp CCSTTCEEEEEECSSCEEEEEECTTTSCEEEEE------------ESSSEEEEEETTBTTSCSE
T ss_pred CCcccceEEEecCCCceEEEEEcCCCCCEEEEE------------cCCCcEEEEECCCCccccc
Confidence 432222233336899999999999 76665544 5699999999987665433
No 22
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.94 E-value=1.4e-25 Score=229.04 Aligned_cols=195 Identities=12% Similarity=0.160 Sum_probs=164.6
Q ss_pred CccCCC-CEEEEEECCCcEEEEECCC-----CceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee
Q 008356 1 MYNCKD-EHLASISLSGDLILHNLAS-----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (568)
Q Consensus 1 afSpdG-~~LasGs~DG~V~VWDl~t-----g~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v 74 (568)
+|+|++ ++|++|+.|++|++||+.. +..+..+.+ |...|.+++|+++++ +|++|+.|++|+|||+.+++ .+
T Consensus 24 ~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~-h~~~v~~~~~s~dg~-~l~s~s~D~~v~~wd~~~~~-~~ 100 (319)
T 3frx_A 24 ATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKG-HSHIVQDCTLTADGA-YALSASWDKTLRLWDVATGE-TY 100 (319)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEEC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTE-EE
T ss_pred EccCCCccEEEEecCCccEEEecCCCCCccccccceEEeC-CcccEEEEEECCCCC-EEEEEeCCCEEEEEECCCCC-ee
Confidence 367765 8999999999999999863 234566776 778899999999998 89999999999999998887 46
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecC------CCEEEEEEcCCeEEE
Q 008356 75 SWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDD------DWILTAGTSNGRVVF 148 (568)
Q Consensus 75 ~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPd------g~~LasGs~DG~V~V 148 (568)
..+.+|...|.+++|+|++.+|++++.|++|++||++.........|...|.+++|.|+ +.+|++++.|+.|++
T Consensus 101 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~ 180 (319)
T 3frx_A 101 QRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKA 180 (319)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEE
T ss_pred EEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEE
Confidence 77889999999999999999999999999999999986555455579999999999985 458999999999999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 149 WDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
||++... ....+ .+|...|.+++|+|++++|++ ++.|+.|++||++....
T Consensus 181 wd~~~~~-~~~~~--~~h~~~v~~~~~sp~g~~l~s------------~~~dg~i~iwd~~~~~~ 230 (319)
T 3frx_A 181 WNLNQFQ-IEADF--IGHNSNINTLTASPDGTLIAS------------AGKDGEIMLWNLAAKKA 230 (319)
T ss_dssp EETTTTE-EEEEE--CCCCSCEEEEEECTTSSEEEE------------EETTCEEEEEETTTTEE
T ss_pred EECCcch-hheee--cCCCCcEEEEEEcCCCCEEEE------------EeCCCeEEEEECCCCcE
Confidence 9998763 23333 389999999999997666554 46699999999977544
No 23
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=2.1e-25 Score=222.42 Aligned_cols=198 Identities=16% Similarity=0.284 Sum_probs=161.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc----eeEEeeCCCCCcEEEEEEcc--CCCeEEEEEeCCCeEEEEECCCCC---
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGA----KAAELKDPNEQVLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGRS--- 71 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~----~v~~l~~~h~~~Vs~Lafsp--dg~~lLaTgs~DGtV~VWDl~t~~--- 71 (568)
+|+|++++|++|+.||.|+|||+.++. ....+.+ |...|.+++|++ +++ +|++++.||.|++||+....
T Consensus 18 ~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~d~~-~l~s~~~dg~v~vwd~~~~~~~~ 95 (351)
T 3f3f_A 18 VYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRA-HDSSIVAIDWASPEYGR-IIASASYDKTVKLWEEDPDQEEC 95 (351)
T ss_dssp EECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEEC-CSSCEEEEEECCGGGCS-EEEEEETTSCEEEEEECTTSCTT
T ss_pred EEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceecc-CCCcEEEEEEcCCCCCC-EEEEEcCCCeEEEEecCCCcccc
Confidence 489999999999999999999998763 4556665 778899999999 466 89999999999999997753
Q ss_pred -----ceeEEeccCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEECCCCce-----------------------------
Q 008356 72 -----PKVSWLKQHSAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRP----------------------------- 115 (568)
Q Consensus 72 -----~~v~~l~~H~~~VtslafsPd--g~~LaSgs~DGtV~IWDlrt~~~----------------------------- 115 (568)
.....+..|...|.+++|+|+ +++|++++.|+.|++||+++++.
T Consensus 96 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (351)
T 3f3f_A 96 SGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSW 175 (351)
T ss_dssp SSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEE
T ss_pred cccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEe
Confidence 236677889999999999998 99999999999999999876542
Q ss_pred -------------------------------eeEe-ecCCCeEEEEEecCC----CEEEEEEcCCeEEEEECCCCCCc--
Q 008356 116 -------------------------------SSCI-TYEAPFSSLAFIDDD----WILTAGTSNGRVVFYDIRGKPQP-- 157 (568)
Q Consensus 116 -------------------------------v~~~-~h~~~ItsLafsPdg----~~LasGs~DG~V~VWDlrt~~~~-- 157 (568)
+..+ .|...|.+++|+|++ ++|++++.||.|++||++.....
T Consensus 176 ~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 255 (351)
T 3f3f_A 176 CPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLA 255 (351)
T ss_dssp CCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC----
T ss_pred ccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccc
Confidence 1112 377889999999998 89999999999999999864210
Q ss_pred -----------------------------------------eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEE
Q 008356 158 -----------------------------------------LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLG 196 (568)
Q Consensus 158 -----------------------------------------v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls 196 (568)
.......+|...|++++|+|++++|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~----------- 324 (351)
T 3f3f_A 256 SEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSA----------- 324 (351)
T ss_dssp -----------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEE-----------
T ss_pred cCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEe-----------
Confidence 1112223799999999999977665554
Q ss_pred ecCCCcEEcCCCCCCC
Q 008356 197 GAVGDSILMPDPLPSV 212 (568)
Q Consensus 197 ~s~Dg~V~VWDlr~~~ 212 (568)
+.|+.|++||+....
T Consensus 325 -~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 325 -GDDGKVRLWKATYSN 339 (351)
T ss_dssp -ETTSCEEEEEECTTS
T ss_pred -cCCCcEEEEecCcCc
Confidence 569999999987644
No 24
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=3e-25 Score=233.16 Aligned_cols=196 Identities=18% Similarity=0.269 Sum_probs=165.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCC-----------------CCcEEEEEEccCCCeEEEEEeCCCeEE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPN-----------------EQVLRVLDYSRNSRHLLVTAGDDGTLH 63 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h-----------------~~~Vs~Lafspdg~~lLaTgs~DGtV~ 63 (568)
+|+|||++|++|+ ++.++||++.+++.+..+..+. ...|++++|+|+++ +|++|+.|+.|+
T Consensus 71 ~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~-~l~s~~~d~~i~ 148 (393)
T 1erj_A 71 KFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGK-FLATGAEDRLIR 148 (393)
T ss_dssp EECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSS-EEEEEETTSCEE
T ss_pred EECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCC-EEEEEcCCCeEE
Confidence 4899999999976 7899999999999887776532 12489999999998 899999999999
Q ss_pred EEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEec-CCCEEEEEEc
Q 008356 64 LWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFID-DDWILTAGTS 142 (568)
Q Consensus 64 VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsP-dg~~LasGs~ 142 (568)
|||+.+.+ .+..+.+|...|++++|+|++++|++++.|++|++||++++++...+.+...+.+++|+| ++++|++|+.
T Consensus 149 iwd~~~~~-~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~ 227 (393)
T 1erj_A 149 IWDIENRK-IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL 227 (393)
T ss_dssp EEETTTTE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEET
T ss_pred EEECCCCc-EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcC
Confidence 99998876 467789999999999999999999999999999999999999888888889999999999 8999999999
Q ss_pred CCeEEEEECCCCCCceEEEe-----ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 143 NGRVVFYDIRGKPQPLTVLR-----ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 143 DG~V~VWDlrt~~~~v~~l~-----~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
|+.|++||+++.. .+..+. ..+|...|.+++|+|++++| ++++.|+.|++||++...
T Consensus 228 d~~v~iwd~~~~~-~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l------------~s~s~d~~v~~wd~~~~~ 289 (393)
T 1erj_A 228 DRAVRVWDSETGF-LVERLDSENESGTGHKDSVYSVVFTRDGQSV------------VSGSLDRSVKLWNLQNAN 289 (393)
T ss_dssp TSCEEEEETTTCC-EEEEEC------CCCSSCEEEEEECTTSSEE------------EEEETTSEEEEEEC----
T ss_pred CCcEEEEECCCCc-EEEeecccccCCCCCCCCEEEEEECCCCCEE------------EEEeCCCEEEEEECCCCC
Confidence 9999999999874 333331 13789999999999976555 444669999999997643
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.94 E-value=7.5e-26 Score=235.52 Aligned_cols=197 Identities=17% Similarity=0.246 Sum_probs=154.4
Q ss_pred CccCCCCEEEEEEC------CCcEEEEECCCCcee----EEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Q 008356 1 MYNCKDEHLASISL------SGDLILHNLASGAKA----AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR 70 (568)
Q Consensus 1 afSpdG~~LasGs~------DG~V~VWDl~tg~~v----~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~ 70 (568)
+|+|||++|++|+. |+.|++|+..++... ..... |...|.+++|+|++. +++++.||+|+|||+.++
T Consensus 49 ~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~s~d~~--~l~~s~dg~v~lWd~~~~ 125 (357)
T 4g56_B 49 RYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQ-TEAGVTDVAWVSEKG--ILVASDSGAVELWEILEK 125 (357)
T ss_dssp EECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEE-CSSCEEEEEEETTTE--EEEEETTSCEEEC-----
T ss_pred EECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCC-CCCCEEEEEEcCCCC--EEEEECCCEEEEeecccc
Confidence 48999999999997 788999998776532 22222 667799999999875 667889999999999776
Q ss_pred Cce---eEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCC-EEEEEEcCCe
Q 008356 71 SPK---VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDW-ILTAGTSNGR 145 (568)
Q Consensus 71 ~~~---v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~-~LasGs~DG~ 145 (568)
+.. .....+|...|++++|+|++++|++++.|+.|++||+++++++..+ .|...|.+++|++++. ++++++.||.
T Consensus 126 ~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~ 205 (357)
T 4g56_B 126 ESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGR 205 (357)
T ss_dssp ---CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSC
T ss_pred ceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCc
Confidence 532 2345689999999999999999999999999999999999988887 5899999999999874 7899999999
Q ss_pred EEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 146 VVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 146 V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
|+|||+++.+ +...+....|...+.+++|+|++ +.++++++.|+.|++||++...
T Consensus 206 v~~wd~~~~~-~~~~~~~~~~~~~v~~v~~sp~~-----------~~~la~g~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 206 ILLWDTRKPK-PATRIDFCASDTIPTSVTWHPEK-----------DDTFACGDETGNVSLVNIKNPD 260 (357)
T ss_dssp EEECCTTSSS-CBCBCCCTTCCSCEEEEEECTTS-----------TTEEEEEESSSCEEEEESSCGG
T ss_pred eEEEECCCCc-eeeeeeeccccccccchhhhhcc-----------cceEEEeecccceeEEECCCCc
Confidence 9999999874 33444444677889999999963 3345566779999999987643
No 26
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.94 E-value=5.4e-25 Score=227.17 Aligned_cols=194 Identities=16% Similarity=0.217 Sum_probs=155.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc--eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc--eeEE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP--KVSW 76 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~--~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~--~v~~ 76 (568)
+|+|++++|++|+.|+.|+|||+..+. .+..+.+ |...|.+++|+|+++ +|++|+.|+.|++||+..... .+..
T Consensus 68 ~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~-h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~ 145 (345)
T 3fm0_A 68 AWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEG-HENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSV 145 (345)
T ss_dssp EECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEE
T ss_pred EECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccC-CCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEE
Confidence 489999999999999999999987764 4566765 778899999999997 899999999999999976542 2556
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCcee--eEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 008356 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS--SCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 77 l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v--~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt 153 (568)
+..|...|.+++|+|++++|++++.|+.|++||+++++.. ..+ .|...|.+++|+|++++|++|+.|+.|+|||...
T Consensus 146 ~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~ 225 (345)
T 3fm0_A 146 LNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYL 225 (345)
T ss_dssp ECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEEC
T ss_pred ecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEecccc
Confidence 7889999999999999999999999999999999887533 333 6899999999999999999999999999999743
Q ss_pred CCCc--------------eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 154 KPQP--------------LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 154 ~~~~--------------v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
.... +..+. ..|...|.+++|++++..++++ +.|+.|++||+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~~~~~~l~s~------------~~d~~i~vw~~~ 282 (345)
T 3fm0_A 226 PGNEQGVACSGSDPSWKCICTLS-GFHSRTIYDIAWCQLTGALATA------------CGDDAIRVFQED 282 (345)
T ss_dssp TTCTTCCCCC---CEEEEEEEEC-SSCSSCEEEEEECTTTCCEEEE------------ETTSCEEEEEEC
T ss_pred CCCCccceeeccCCccceeEEec-CCCCCcEEEEEEecCCCEEEEE------------eCCCeEEEEEeC
Confidence 2111 11111 1277888999998876655443 345556666544
No 27
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=4.9e-25 Score=231.49 Aligned_cols=197 Identities=17% Similarity=0.208 Sum_probs=163.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|+|++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|+|+++ +|++++.|++|++||+.+++. ... ..+
T Consensus 130 ~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~-~l~s~s~d~~v~iwd~~~~~~-~~~-~~~ 205 (393)
T 1erj_A 130 CFSPDGKFLATGAEDRLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDLRTGQC-SLT-LSI 205 (393)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE-EEE-EEC
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCC-EEEEecCCCcEEEEECCCCee-EEE-EEc
Confidence 4899999999999999999999999998888886 777899999999998 799999999999999988763 222 346
Q ss_pred CCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCceeeEe--------ecCCCeEEEEEecCCCEEEEEEcCCeEEEEEC
Q 008356 81 SAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI--------TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDI 151 (568)
Q Consensus 81 ~~~VtslafsP-dg~~LaSgs~DGtV~IWDlrt~~~v~~~--------~h~~~ItsLafsPdg~~LasGs~DG~V~VWDl 151 (568)
...|.+++|+| ++++|++++.|+.|++||+++++.+..+ .|...|.+++|+|++++|++|+.|+.|++||+
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~ 285 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNL 285 (393)
T ss_dssp SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEEC
Confidence 67899999999 9999999999999999999998876654 47889999999999999999999999999999
Q ss_pred CCCCCc---------eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 152 RGKPQP---------LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 152 rt~~~~---------v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
+..... .......+|...|.+++|++++++| ++++.|+.|++||++....
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l------------~sgs~D~~v~iwd~~~~~~ 344 (393)
T 1erj_A 286 QNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYI------------LSGSKDRGVLFWDKKSGNP 344 (393)
T ss_dssp ---------------CEEEEEECCSSCEEEEEECGGGCEE------------EEEETTSEEEEEETTTCCE
T ss_pred CCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEE------------EEEeCCCeEEEEECCCCeE
Confidence 864211 1112233799999999999976554 4556799999999876543
No 28
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=6.2e-26 Score=237.10 Aligned_cols=191 Identities=11% Similarity=0.083 Sum_probs=154.1
Q ss_pred CccCCCCEEEEEE--CCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce-eEEe
Q 008356 1 MYNCKDEHLASIS--LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK-VSWL 77 (568)
Q Consensus 1 afSpdG~~LasGs--~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~-v~~l 77 (568)
+|+|||++|++++ .|++|+|||+.+++.+..+. |...|.+|+|+|+++ +|++++.|+ +++|+..++... ....
T Consensus 140 ~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~--~~~~V~~v~fspdg~-~l~s~s~~~-~~~~~~~~~~~~~~~~~ 215 (365)
T 4h5i_A 140 YISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIE--TRGEVKDLHFSTDGK-VVAYITGSS-LEVISTVTGSCIARKTD 215 (365)
T ss_dssp EECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEE--CSSCCCEEEECTTSS-EEEEECSSC-EEEEETTTCCEEEEECC
T ss_pred EEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeC--CCCceEEEEEccCCc-eEEecccee-EEEEEeccCcceeeeec
Confidence 4899999987654 68999999999999988886 556689999999998 788887655 555655554433 3345
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCC----eEEEEECCCCcee----e-EeecCCCeEEEEEecCCCEEEEEEcCCeEEE
Q 008356 78 KQHSAPTAGISFSSDDKIIASVGLDK----KLYTYDPGSRRPS----S-CITYEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (568)
Q Consensus 78 ~~H~~~VtslafsPdg~~LaSgs~DG----tV~IWDlrt~~~v----~-~~~h~~~ItsLafsPdg~~LasGs~DG~V~V 148 (568)
..|...|.+++|+|+++++++++.|+ .+++||+...... . ...|...|++++|+|+|++||+|+.|+.|+|
T Consensus 216 ~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~i 295 (365)
T 4h5i_A 216 FDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIAL 295 (365)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred CCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEE
Confidence 67889999999999999999999887 6889998776532 1 2257889999999999999999999999999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 149 WDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
||+++.+.....+. +|...|++|+|+|+|++|+++ +.|++|+|||+.
T Consensus 296 wd~~~~~~~~~~~~--gH~~~V~~v~fSpdg~~laS~------------S~D~tvrvw~ip 342 (365)
T 4h5i_A 296 VKLKDLSMSKIFKQ--AHSFAITEVTISPDSTYVASV------------SAANTIHIIKLP 342 (365)
T ss_dssp EETTTTEEEEEETT--SSSSCEEEEEECTTSCEEEEE------------ETTSEEEEEECC
T ss_pred EECCCCcEEEEecC--cccCCEEEEEECCCCCEEEEE------------eCCCeEEEEEcC
Confidence 99998742222233 799999999999977665554 669999999984
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.94 E-value=2.6e-25 Score=232.58 Aligned_cols=196 Identities=16% Similarity=0.159 Sum_probs=163.4
Q ss_pred ccCC-CCEEEEEECCCcEEEEECCCCceeEEee----CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 008356 2 YNCK-DEHLASISLSGDLILHNLASGAKAAELK----DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (568)
Q Consensus 2 fSpd-G~~LasGs~DG~V~VWDl~tg~~v~~l~----~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~ 76 (568)
|+|+ +.+|++|+.|++|++||+.+++.+..+. ..|...|.+++|++.+.++|++|+.|++|++||++.....+..
T Consensus 165 ~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~ 244 (380)
T 3iz6_a 165 YVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRT 244 (380)
T ss_dssp CCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEE
T ss_pred EecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEE
Confidence 5665 4579999999999999999999887762 2367788999998844459999999999999999855445778
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeec--------CCCeEEEEEecCCCEEEEEEcCCeEEE
Q 008356 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY--------EAPFSSLAFIDDDWILTAGTSNGRVVF 148 (568)
Q Consensus 77 l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h--------~~~ItsLafsPdg~~LasGs~DG~V~V 148 (568)
+.+|...|++++|+|++++|++++.|++|++||+++++.+..+.. ...|.+++|+|+|++|++|+.||.|++
T Consensus 245 ~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~v 324 (380)
T 3iz6_a 245 YHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYV 324 (380)
T ss_dssp ECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEE
T ss_pred ECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEE
Confidence 899999999999999999999999999999999999988877632 124899999999999999999999999
Q ss_pred EECCCCCCceEEEee--cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 149 YDIRGKPQPLTVLRA--CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 149 WDlrt~~~~v~~l~~--~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
||+...+. ...+.. .+|.+.|++++|+|+|++|+++ +.|+.|++||+..
T Consensus 325 wd~~~~~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg------------s~D~~i~iW~~~~ 375 (380)
T 3iz6_a 325 WDTLLAEM-VLNLGTLQNSHEGRISCLGLSSDGSALCTG------------SWDKNLKIWAFSG 375 (380)
T ss_dssp EETTTCCE-EEEECCSCSSCCCCCCEEEECSSSSEEEEE------------CTTSCEEEEECCS
T ss_pred EECCCCce-EEEEecccCCCCCceEEEEECCCCCEEEEe------------eCCCCEEEEecCC
Confidence 99987743 233311 3799999999999976655554 6699999999864
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.3e-25 Score=226.53 Aligned_cols=194 Identities=14% Similarity=0.231 Sum_probs=154.1
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCC--ceeEEe-eCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC------Cc
Q 008356 2 YNCKDEHLASISLSGDLILHNLASG--AKAAEL-KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR------SP 72 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg--~~v~~l-~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~------~~ 72 (568)
|+++ +|++|+.||.|+|||+..+ +.+..+ ...|...|.+++|+|+++ +|++|+.|++|+|||+... ..
T Consensus 22 ~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las~s~D~~v~iw~~~~~~~~~~~~~ 98 (330)
T 2hes_X 22 FSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTS-LLAAGSFDSTVSIWAKEESADRTFEMD 98 (330)
T ss_dssp EETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSS-EEEEEETTSCEEEEEC-------CCCE
T ss_pred cCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCC-EEEEEeCCCcEEEEEcccCcCccccce
Confidence 4554 9999999999999999865 345555 333888999999999997 8999999999999998532 12
Q ss_pred eeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC----ceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEE
Q 008356 73 KVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSR----RPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVV 147 (568)
Q Consensus 73 ~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~----~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~ 147 (568)
....+.+|...|++++|+|++++|++++.|++|++||++.. +++..+ .|...|.+++|+|++.+|++++.|+.|+
T Consensus 99 ~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~ 178 (330)
T 2hes_X 99 LLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVR 178 (330)
T ss_dssp EEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEE
T ss_pred eEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEE
Confidence 35678899999999999999999999999999999999532 344444 6889999999999999999999999999
Q ss_pred EEECCCCC-CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 148 FYDIRGKP-QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 148 VWDlrt~~-~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
+||++... .++..+. +|...|.+++|+|++ ...++++++.|+.|++||++.
T Consensus 179 iW~~~~~~~~~~~~~~--~h~~~v~~~~~~~~~----------~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 179 IWKDYDDDWECVAVLN--GHEGTVWSSDFDKTE----------GVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp EEEEETTEEEEEEEEC--CCSSCEEEEEECCSS----------SSCEEEEEETTSCEEEEEEEE
T ss_pred EEECCCCCeeEEEEcc--CCCCcEEEEEecCCC----------CeeEEEEEeCCCeEEEEEecC
Confidence 99987642 2334444 899999999999962 234566777899999999754
No 31
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=6.1e-25 Score=244.63 Aligned_cols=197 Identities=13% Similarity=0.150 Sum_probs=161.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc-eeE----
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP-KVS---- 75 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~-~v~---- 75 (568)
+|+|||++|++++ ++.|+|||+.+++....+.+ |...|.+++|+|+++ +|++|+.|++|+|||+..... ...
T Consensus 25 ~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~-h~~~v~~~~~spdg~-~lasg~~d~~v~lWd~~~~~~~~~~~~~~ 101 (611)
T 1nr0_A 25 GNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTE-HSHQTTVAKTSPSGY-YCASGDVHGNVRIWDTTQTTHILKTTIPV 101 (611)
T ss_dssp EECTTSSEEEEEE-TTEEEEEETTCSSCCEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEESSSTTCCEEEEEEC
T ss_pred eeCCCCCEEEeCC-CCEEEEecCCCcccCeEecC-CCCceEEEEECCCCc-EEEEEeCCCCEEEeECCCCcceeeEeecc
Confidence 4899999999987 56999999998888888887 777899999999998 899999999999999853321 111
Q ss_pred ----------------------------------------EeccCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc
Q 008356 76 ----------------------------------------WLKQHSAPTAGISFSSDDK-IIASVGLDKKLYTYDPGSRR 114 (568)
Q Consensus 76 ----------------------------------------~l~~H~~~VtslafsPdg~-~LaSgs~DGtV~IWDlrt~~ 114 (568)
.+.+|...|++++|+|++. .|++++.|++|++||.++++
T Consensus 102 ~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~ 181 (611)
T 1nr0_A 102 FSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK 181 (611)
T ss_dssp SSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE
T ss_pred cCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe
Confidence 1345677788888888765 68999999999999999888
Q ss_pred eeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEee-----cCCCCCeeEEEEccCCCeEEEeccC
Q 008356 115 PSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRA-----CSSSEAVSSLCWQRAKPVFIDETTC 188 (568)
Q Consensus 115 ~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~-----~~h~~~VtsLafspdg~~Las~s~s 188 (568)
++..+ .|...|.+++|+|++++|++|+.|+.|+|||++++. ....+.. .+|.+.|.+++|+|++++|++
T Consensus 182 ~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~-~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s---- 256 (611)
T 1nr0_A 182 FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT-KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIAS---- 256 (611)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC-EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEE----
T ss_pred EeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCc-EeeeeccccccccccCCCEEEEEECCCCCEEEE----
Confidence 77777 689999999999999999999999999999998764 2333321 169999999999997665544
Q ss_pred CCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 189 KAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 189 sd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
++.|+.|++||++....
T Consensus 257 --------~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 257 --------ASADKTIKIWNVATLKV 273 (611)
T ss_dssp --------EETTSEEEEEETTTTEE
T ss_pred --------EeCCCeEEEEeCCCCce
Confidence 46699999999976544
No 32
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.94 E-value=2.1e-25 Score=232.60 Aligned_cols=195 Identities=14% Similarity=0.151 Sum_probs=165.5
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~ 81 (568)
|++++++|++|+.||.|+|||+.+++....+.. |...|.+++|+|+++ +|++|+.|+.|++||+...+. +..+.+|.
T Consensus 105 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~-~~~~~~h~ 181 (420)
T 3vl1_A 105 AKLQMRRFILGTTEGDIKVLDSNFNLQREIDQA-HVSEITKLKFFPSGE-ALISSSQDMQLKIWSVKDGSN-PRTLIGHR 181 (420)
T ss_dssp ECSSSCEEEEEETTSCEEEECTTSCEEEEETTS-SSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCC-CEEEECCS
T ss_pred EecCCCEEEEEECCCCEEEEeCCCcceeeeccc-ccCccEEEEECCCCC-EEEEEeCCCeEEEEeCCCCcC-ceEEcCCC
Confidence 689999999999999999999998888777665 778899999999998 899999999999999988764 66788999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee----cCCCeEEE---------------------EEecCCCE
Q 008356 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT----YEAPFSSL---------------------AFIDDDWI 136 (568)
Q Consensus 82 ~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~----h~~~ItsL---------------------afsPdg~~ 136 (568)
..|++++|+|++++|++++.|+.|++||+++++.+..+. +...+.++ +|+|++++
T Consensus 182 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 261 (420)
T 3vl1_A 182 ATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKY 261 (420)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCE
Confidence 999999999999999999999999999999998887773 34445444 45788999
Q ss_pred EEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 137 LTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 137 LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
|++|+.||.|++||+++......... .|...|.+++|+|+++ .++++++.|+.|++||++...
T Consensus 262 l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~-----------~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 262 VIAGHVSGVITVHNVFSKEQTIQLPS--KFTCSCNSLTVDGNNA-----------NYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECC--TTSSCEEEEEECSSCT-----------TEEEEEETTSEEEEEETTCTT
T ss_pred EEEEcCCCeEEEEECCCCceeEEccc--ccCCCceeEEEeCCCC-----------CEEEEEeCCCeEEEEEcCCCc
Confidence 99999999999999998754333332 6889999999999755 144555679999999998653
No 33
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.94 E-value=2.4e-24 Score=215.72 Aligned_cols=194 Identities=17% Similarity=0.198 Sum_probs=169.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc--eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK 78 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~--~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~ 78 (568)
+|+|++++|++++.||.|++||+.+++ ....+.. |...|.+++|+++++ +|++++.||.|++||+.+.+ ....+.
T Consensus 104 ~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~-~l~~~~~dg~v~~~d~~~~~-~~~~~~ 180 (337)
T 1gxr_A 104 KLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTS-SAPACYALAISPDSK-VCFSCCSDGNIAVWDLHNQT-LVRQFQ 180 (337)
T ss_dssp EECTTSSEEEEEESSSEEEEEECCCC--EEEEEEEC-SSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE-EEEEEC
T ss_pred EEcCCCCEEEEEcCCCcEEEEECCCCCcceeeeccc-CCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCc-eeeeee
Confidence 478999999999999999999998877 4555654 677899999999987 89999999999999998876 466788
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce
Q 008356 79 QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (568)
Q Consensus 79 ~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v 158 (568)
.|...|.+++|+|++++|++++.|+.|++||+++++.+..+.+...+.+++|+|++++|++++.|+.|++||++....
T Consensus 181 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-- 258 (337)
T 1gxr_A 181 GHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-- 258 (337)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE--
T ss_pred cccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe--
Confidence 899999999999999999999999999999999999988889999999999999999999999999999999998742
Q ss_pred EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 159 TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 159 ~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
.....|...|.+++|+|++++++++ +.|+.|++||+.....
T Consensus 259 --~~~~~~~~~v~~~~~~~~~~~l~~~------------~~dg~i~~~~~~~~~~ 299 (337)
T 1gxr_A 259 --YQLHLHESCVLSLKFAYCGKWFVST------------GKDNLLNAWRTPYGAS 299 (337)
T ss_dssp --EEECCCSSCEEEEEECTTSSEEEEE------------ETTSEEEEEETTTCCE
T ss_pred --EEEcCCccceeEEEECCCCCEEEEe------------cCCCcEEEEECCCCeE
Confidence 2334789999999999976655444 5689999999876543
No 34
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.94 E-value=2.2e-24 Score=218.35 Aligned_cols=198 Identities=16% Similarity=0.233 Sum_probs=167.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++|++++.||.|+|||+.+++.+..+.. |...|.+++|+++++ +|++++.||.|++||+.+.+. +..+. |
T Consensus 39 ~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~-~~~~~-~ 114 (369)
T 3zwl_B 39 KYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDG-HTGTIWSIDVDCFTK-YCVTGSADYSIKLWDVSNGQC-VATWK-S 114 (369)
T ss_dssp EECTTSCEEEEEESSSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSS-EEEEEETTTEEEEEETTTCCE-EEEEE-C
T ss_pred EEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhh-cCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcE-EEEee-c
Confidence 4899999999999999999999999999998886 777899999999987 899999999999999988874 34444 8
Q ss_pred CCCeEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcee-----------eEe-ecCC--CeEEEEEecCCCEEEEEE
Q 008356 81 SAPTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPS-----------SCI-TYEA--PFSSLAFIDDDWILTAGT 141 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~D-----GtV~IWDlrt~~~v-----------~~~-~h~~--~ItsLafsPdg~~LasGs 141 (568)
...|.+++|+|++++|++++.+ +.|++||++..... ..+ .+.. .+.+++|+|++++|++++
T Consensus 115 ~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (369)
T 3zwl_B 115 PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH 194 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE
T ss_pred CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc
Confidence 8999999999999999999999 99999999765422 112 3444 899999999999999999
Q ss_pred cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCcccc
Q 008356 142 SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (568)
Q Consensus 142 ~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~~s 216 (568)
.||.|++||++........+. .|...|.+++|+|++++|++ ++.|+.|++||++.......
T Consensus 195 ~dg~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~------------~~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 195 KDGKISKYDVSNNYEYVDSID--LHEKSISDMQFSPDLTYFIT------------SSRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp TTSEEEEEETTTTTEEEEEEE--CCSSCEEEEEECTTSSEEEE------------EETTSEEEEEETTTCCEEEE
T ss_pred CCCEEEEEECCCCcEeEEEEe--cCCCceeEEEECCCCCEEEE------------ecCCceEEEEECCCCceeee
Confidence 999999999998545555555 78999999999997665544 45699999999987654433
No 35
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.93 E-value=2e-24 Score=217.61 Aligned_cols=196 Identities=17% Similarity=0.246 Sum_probs=165.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++|++++.||.|++||+.+++.+..+.+ |...|.+++|+|+++ +|++|+.|+.|++||+.+.+ .+..+..|
T Consensus 72 ~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~-~~~~~~~~ 148 (312)
T 4ery_A 72 AWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKG-HSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKTGK-CLKTLPAH 148 (312)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCC-EEEEECCC
T ss_pred EEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcC-CCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCCE-EEEEecCC
Confidence 4899999999999999999999999999999987 677899999999997 89999999999999998876 36778899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe--ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~--~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v 158 (568)
...|.+++|+|++++|++++.|+.|++||+++++.+..+ .+...+.+++|+|++++|++++.|+.|++||+++.. .+
T Consensus 149 ~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~-~~ 227 (312)
T 4ery_A 149 SDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGK-CL 227 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTE-EE
T ss_pred CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCc-EE
Confidence 999999999999999999999999999999999887766 456789999999999999999999999999999873 33
Q ss_pred EEEeecCCCCCeeE--EEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 159 TVLRACSSSEAVSS--LCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 159 ~~l~~~~h~~~Vts--Lafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
..+. +|...+.+ ..|.+ .++.++++++.|+.|++||++....
T Consensus 228 ~~~~--~~~~~~~~~~~~~~~-----------~~~~~l~sg~~dg~i~vwd~~~~~~ 271 (312)
T 4ery_A 228 KTYT--GHKNEKYCIFANFSV-----------TGGKWIVSGSEDNLVYIWNLQTKEI 271 (312)
T ss_dssp EEEC--SSCCSSSCCCEEEEC-----------SSSCEEEECCTTSCEEEEETTTCCE
T ss_pred EEEE--ecCCceEEEEEEEEe-----------CCCcEEEEECCCCEEEEEECCCchh
Confidence 4444 45443322 23332 1445667778899999999876543
No 36
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=2e-24 Score=222.06 Aligned_cols=191 Identities=15% Similarity=0.243 Sum_probs=159.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe---
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL--- 77 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l--- 77 (568)
+|+|++.+|++|+.|++|+|||+.+++.+..+.+ |...|.+++|+|+++ +|++++.|+.|++||+.... ....
T Consensus 83 ~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~-~l~s~~~d~~i~~wd~~~~~--~~~~~~~ 158 (343)
T 2xzm_R 83 ALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVG-HQSEVYSVAFSPDNR-QILSAGAEREIKLWNILGEC--KFSSAEK 158 (343)
T ss_dssp EECSSTTEEEEEETTSEEEEEETTSSCEEEEEEC-CCSCEEEEEECSSTT-EEEEEETTSCEEEEESSSCE--EEECCTT
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcC-CCCcEEEEEECCCCC-EEEEEcCCCEEEEEeccCCc--eeeeecc
Confidence 4789999999999999999999999999999987 778899999999998 79999999999999997443 2222
Q ss_pred ccCCCCeEEEEEcCCC----------CEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeE
Q 008356 78 KQHSAPTAGISFSSDD----------KIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRV 146 (568)
Q Consensus 78 ~~H~~~VtslafsPdg----------~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V 146 (568)
..|...|.+++|+|++ .+|++++.|+.|++||.. .+....+ .|...|.+++|+|++++|++|+.||.|
T Consensus 159 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v 237 (343)
T 2xzm_R 159 ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKL 237 (343)
T ss_dssp TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred cCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCCCCEEEEEcCCCeE
Confidence 3788999999999976 799999999999999954 4444444 689999999999999999999999999
Q ss_pred EEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 147 VFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 147 ~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
++||++....+...+. +...|.+++|+|++++++. +.|+.|++||+....
T Consensus 238 ~iwd~~~~~~~~~~~~---~~~~v~~v~~sp~~~~la~-------------~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 238 LIWDILNLTYPQREFD---AGSTINQIAFNPKLQWVAV-------------GTDQGVKIFNLMTQS 287 (343)
T ss_dssp EEEESSCCSSCSEEEE---CSSCEEEEEECSSSCEEEE-------------EESSCEEEEESSSCC
T ss_pred EEEECCCCcccceeec---CCCcEEEEEECCCCCEEEE-------------ECCCCEEEEEeCCCC
Confidence 9999965544444443 4567999999997655433 248889999986543
No 37
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.93 E-value=9.7e-25 Score=220.29 Aligned_cols=194 Identities=12% Similarity=0.173 Sum_probs=158.3
Q ss_pred ccC--CCCEEEEEECCCcEEEEECCCCc--eeEEeeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-cee
Q 008356 2 YNC--KDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKV 74 (568)
Q Consensus 2 fSp--dG~~LasGs~DG~V~VWDl~tg~--~v~~l~~~h~~~Vs~Lafspd--g~~lLaTgs~DGtV~VWDl~t~~-~~v 74 (568)
|++ ++++|++|+.||+|+|||+.+++ .+..+.. |...|.+++|+|+ +. +|++++.|+.|++||++... ...
T Consensus 61 ~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~ 138 (297)
T 2pm7_B 61 WAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTSP 138 (297)
T ss_dssp ECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECC-CSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBCC
T ss_pred ecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeec-CCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCceee
Confidence 555 38999999999999999998774 4455554 7788999999997 65 89999999999999997653 224
Q ss_pred EEeccCCCCeEEEEEcCC-------------CCEEEEEeCCCeEEEEECCCCc----eeeEe-ecCCCeEEEEEecCC--
Q 008356 75 SWLKQHSAPTAGISFSSD-------------DKIIASVGLDKKLYTYDPGSRR----PSSCI-TYEAPFSSLAFIDDD-- 134 (568)
Q Consensus 75 ~~l~~H~~~VtslafsPd-------------g~~LaSgs~DGtV~IWDlrt~~----~v~~~-~h~~~ItsLafsPdg-- 134 (568)
..+.+|...|++++|+|+ +++|++++.|++|++||+++++ ....+ .|...|.+++|+|++
T Consensus 139 ~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~ 218 (297)
T 2pm7_B 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 218 (297)
T ss_dssp EEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred eeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCC
Confidence 567889999999999996 5799999999999999998765 33444 589999999999984
Q ss_pred -CEEEEEEcCCeEEEEECCCCCCce--EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 135 -WILTAGTSNGRVVFYDIRGKPQPL--TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 135 -~~LasGs~DG~V~VWDlrt~~~~v--~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
.+|++++.|+.|+|||++...... ..+....|...|.+++|+|++++|+++ +.|+.|++|++.
T Consensus 219 ~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~------------~~D~~v~lw~~~ 284 (297)
T 2pm7_B 219 RSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS------------GGDNKVTLWKEN 284 (297)
T ss_dssp SEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEE------------ETTSCEEEEEEC
T ss_pred ceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEE------------cCCCcEEEEEEC
Confidence 899999999999999998753221 233224688899999999987666555 569999999875
No 38
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.93 E-value=9.1e-26 Score=232.33 Aligned_cols=199 Identities=12% Similarity=0.165 Sum_probs=158.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCC--ceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC--ceeEE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASG--AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS--PKVSW 76 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg--~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~--~~v~~ 76 (568)
+|+|++++|++|+.||.|+|||+.++ +.+..+.+ |...|.+++|+|+++ +|++++.|+.|++||+.+.. .....
T Consensus 18 ~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~-~l~s~s~d~~v~vwd~~~~~~~~~~~~ 95 (377)
T 3dwl_C 18 AFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSD-HDKIVTCVDWAPKSN-RIVTCSQDRNAYVYEKRPDGTWKQTLV 95 (377)
T ss_dssp EECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCC-CSSCEEEEEECTTTC-CEEEEETTSSEEEC------CCCCEEE
T ss_pred EECCCCCEEEEecCCCEEEEEEccCCceEEEEEEec-CCceEEEEEEeCCCC-EEEEEeCCCeEEEEEcCCCCceeeeeE
Confidence 48999999999999999999999888 66677775 778899999999987 89999999999999998765 23566
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCce---eeEe-e-cCCCeEEEEEecCCCEEEEEEcCCeEEEEEC
Q 008356 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP---SSCI-T-YEAPFSSLAFIDDDWILTAGTSNGRVVFYDI 151 (568)
Q Consensus 77 l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~---v~~~-~-h~~~ItsLafsPdg~~LasGs~DG~V~VWDl 151 (568)
+..|...|.+++|+|++++|++++.|+.|++||+++++. ...+ . |...|.+++|+|++++|++++.|+.|++||+
T Consensus 96 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 175 (377)
T 3dwl_C 96 LLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSA 175 (377)
T ss_dssp CCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEE
T ss_pred ecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEE
Confidence 788999999999999999999999999999999998763 4445 4 8999999999999999999999999999999
Q ss_pred CCCC--------------CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 152 RGKP--------------QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 152 rt~~--------------~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
+... .....+..++|...|.+++|+|++++|+++ +.|+.|++||++....
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~------------~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 176 YVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYA------------GHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp CCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEE------------ETTTEEC-CEECSTTS
T ss_pred EecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEE------------eCCCcEEEEECCCCCC
Confidence 6321 112233333799999999999987665554 5699999999876543
No 39
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.93 E-value=1e-25 Score=231.95 Aligned_cols=181 Identities=12% Similarity=0.134 Sum_probs=145.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc---eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc--eeE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP--KVS 75 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~---~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~--~v~ 75 (568)
+|+|++++|++++.||.|+|||+.+++ ....+.. |...|.+++|+|+++ +|++++.|+.|++||++.... ...
T Consensus 62 ~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~ 139 (377)
T 3dwl_C 62 DWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLR-LNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWWVSK 139 (377)
T ss_dssp EECTTTCCEEEEETTSSEEEC------CCCCEEECCC-CSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CCCCE
T ss_pred EEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecc-cCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccceeee
Confidence 489999999999999999999998876 4555555 778899999999987 799999999999999987652 245
Q ss_pred Eecc-CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC------------------CceeeEeecCCCeEEEEEecCCCE
Q 008356 76 WLKQ-HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS------------------RRPSSCITYEAPFSSLAFIDDDWI 136 (568)
Q Consensus 76 ~l~~-H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt------------------~~~v~~~~h~~~ItsLafsPdg~~ 136 (568)
.+.. |...|++++|+|++++|++++.|+.|++||++. ++++..+.|...|.+++|+|++++
T Consensus 140 ~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 140 HLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNA 219 (377)
T ss_dssp EECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSC
T ss_pred EeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCE
Confidence 6666 999999999999999999999999999999853 334444478889999999999999
Q ss_pred EEEEEcCCeEEEEECCCCCCc---eEEEeecCCCCCeeEEEEccCCCeEEEe
Q 008356 137 LTAGTSNGRVVFYDIRGKPQP---LTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 137 LasGs~DG~V~VWDlrt~~~~---v~~l~~~~h~~~VtsLafspdg~~Las~ 185 (568)
|++++.||.|++||+++...+ +..+. .|...|.+++|+|++++|+++
T Consensus 220 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 220 LAYAGHDSSVTIAYPSAPEQPPRALITVK--LSQLPLRSLLWANESAIVAAG 269 (377)
T ss_dssp EEEEETTTEEC-CEECSTTSCEEECCCEE--CSSSCEEEEEEEETTEEEEEE
T ss_pred EEEEeCCCcEEEEECCCCCCcceeeEeec--CCCCceEEEEEcCCCCEEEEE
Confidence 999999999999999988653 23333 789999999999987776655
No 40
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.93 E-value=1.9e-24 Score=240.56 Aligned_cols=198 Identities=11% Similarity=0.164 Sum_probs=161.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCce--eEEeeC-------------------------------------------C
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAK--AAELKD-------------------------------------------P 35 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~--v~~l~~-------------------------------------------~ 35 (568)
+|+|+|++||+|+.||+|+|||+.+++. ...+.. .
T Consensus 66 ~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~g 145 (611)
T 1nr0_A 66 KTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTG 145 (611)
T ss_dssp EECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCC
T ss_pred EECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecC
Confidence 4899999999999999999999864331 222211 2
Q ss_pred CCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCce
Q 008356 36 NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP 115 (568)
Q Consensus 36 h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~ 115 (568)
|...|.+++|+|++..+|++|+.|++|++||....+ ....+.+|...|++++|+|++++|++++.|++|++||+++++.
T Consensus 146 h~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~-~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~ 224 (611)
T 1nr0_A 146 QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK-FKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTK 224 (611)
T ss_dssp CSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE-EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe-EeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcE
Confidence 455677788888776579999999999999987765 3667899999999999999999999999999999999999988
Q ss_pred eeEe--------ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEE--------------------------
Q 008356 116 SSCI--------TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVL-------------------------- 161 (568)
Q Consensus 116 v~~~--------~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l-------------------------- 161 (568)
+..+ .|.+.|.+++|+|++++|++++.|+.|+|||+++.+. ...+
T Consensus 225 ~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d 303 (611)
T 1nr0_A 225 TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV-EKTIPVGTRIEDQQLGIIWTKQALVSISAN 303 (611)
T ss_dssp EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE-EEEEECCSSGGGCEEEEEECSSCEEEEETT
T ss_pred eeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCce-eeeecCCCCccceeEEEEEcCCEEEEEeCC
Confidence 7766 5889999999999999999999999999999987532 1111
Q ss_pred ---------------eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 162 ---------------RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 162 ---------------~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
...+|...|++++|+|+|++|++ ++.|+.|++||+....
T Consensus 304 ~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s------------~s~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 304 GFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFS------------ADAEGHINSWDISTGI 357 (611)
T ss_dssp CCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE------------EETTSCEEEEETTTCC
T ss_pred CcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEE------------EeCCCcEEEEECCCCc
Confidence 12378899999999997665554 4669999999987643
No 41
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.93 E-value=1.7e-24 Score=235.57 Aligned_cols=185 Identities=20% Similarity=0.327 Sum_probs=161.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++|++++.|+.|++||. +++.+..+.+ |...|.+++|+|+++ +|++++.|+.|++||.... .+..+.+|
T Consensus 392 ~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~-~~~~v~~~~~s~d~~-~l~~~~~d~~v~~w~~~~~--~~~~~~~~ 466 (577)
T 2ymu_A 392 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVWGVAFSPDDQ-TIASASDDKTVKLWNRNGQ--LLQTLTGH 466 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECT-TCCEEEEEEC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTSC--EEEEEECC
T ss_pred EECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecC-CCCCeEEEEECCCCC-EEEEEcCCCEEEEEECCCC--EEEEEcCC
Confidence 47899999999999999999995 6778888886 777899999999998 8999999999999997654 36778899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~ 159 (568)
...|++++|+|++++|++++.|+.|++||. +++++..+ .|...|++++|+|++++|++++.||.|+|||... +.+.
T Consensus 467 ~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~--~~~~ 543 (577)
T 2ymu_A 467 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQ 543 (577)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS--CEEE
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC--CEEE
Confidence 999999999999999999999999999996 45666555 6899999999999999999999999999999643 3455
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCC
Q 008356 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (568)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWD 207 (568)
.+. +|.+.|++++|+|++++|+++ +.|++|++||
T Consensus 544 ~~~--~h~~~v~~~~fs~dg~~l~s~------------~~D~~i~~Wd 577 (577)
T 2ymu_A 544 TLT--GHSSSVWGVAFSPDGQTIASA------------SSDKTVKLWN 577 (577)
T ss_dssp EEE--CCSSCEEEEEECTTSSCEEEE------------ETTSCEEEEC
T ss_pred EEc--CCCCCEEEEEEcCCCCEEEEE------------eCCCEEEEeC
Confidence 555 899999999999987665554 5699999997
No 42
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.93 E-value=2.9e-25 Score=226.44 Aligned_cols=200 Identities=10% Similarity=0.131 Sum_probs=162.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc--eeEEeeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ceeE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKVS 75 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~--~v~~l~~~h~~~Vs~Lafspd--g~~lLaTgs~DGtV~VWDl~t~~-~~v~ 75 (568)
+|+|+|++|++|+.|++|+|||+.+++ .+..+.+ |...|.+++|++. ++ +|++|+.|++|++||+.++. ....
T Consensus 20 ~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~g-H~~~V~~v~~~~~~~~~-~l~s~s~D~~v~iWd~~~~~~~~~~ 97 (316)
T 3bg1_A 20 QMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRG-HEGPVWQVAWAHPMYGN-ILASCSYDRKVIIWREENGTWEKSH 97 (316)
T ss_dssp EECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEEC-CSSCEEEEEECCGGGSS-CEEEEETTSCEEEECCSSSCCCEEE
T ss_pred eEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcC-CCccEEEEEeCCCCCCC-EEEEEECCCEEEEEECCCCcceEEE
Confidence 488999999999999999999998775 4566776 7788999999863 55 89999999999999998754 2356
Q ss_pred EeccCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEECCCCcee---eEe-ecCCCeEEEEEecC----------------
Q 008356 76 WLKQHSAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRPS---SCI-TYEAPFSSLAFIDD---------------- 133 (568)
Q Consensus 76 ~l~~H~~~VtslafsPd--g~~LaSgs~DGtV~IWDlrt~~~v---~~~-~h~~~ItsLafsPd---------------- 133 (568)
.+.+|...|++++|+|+ +.+|++++.|+.|++||++.+... ..+ .|...|.+++|+|+
T Consensus 98 ~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 177 (316)
T 3bg1_A 98 EHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPN 177 (316)
T ss_dssp EECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCC
T ss_pred EccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCcc
Confidence 67889999999999997 789999999999999999876422 222 57888999999997
Q ss_pred -CCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 134 -DWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 134 -g~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
+++|++|+.|+.|+|||++............+|...|.+++|+|++. .+..+|++++.|+.|++||+..
T Consensus 178 ~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~--------~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 178 YIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG--------LPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSS--------CSCCEEEEEETTCEEEEEECSS
T ss_pred ccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCC--------CCCceEEEEcCCCeEEEEEccC
Confidence 47899999999999999975432222223348999999999999741 1235677778899999999865
No 43
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.3e-24 Score=222.97 Aligned_cols=194 Identities=14% Similarity=0.206 Sum_probs=154.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCC-------CceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC-C-
Q 008356 1 MYNCKDEHLASISLSGDLILHNLAS-------GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR-S- 71 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~t-------g~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~-~- 71 (568)
+|+|++++|++|+.|+.|+|||+.. .+.+..+.+ |...|.+++|+|+++ +|++|+.|++|++||+... .
T Consensus 65 ~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~-h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~ 142 (330)
T 2hes_X 65 AWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEG-HENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEE 142 (330)
T ss_dssp EECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC-----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCC
T ss_pred EECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcC-CCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCC
Confidence 4899999999999999999999853 344556665 778899999999998 8999999999999999532 2
Q ss_pred -ceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC--ceeeEe-ecCCCeEEEEEecC--CCEEEEEEcCCe
Q 008356 72 -PKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSR--RPSSCI-TYEAPFSSLAFIDD--DWILTAGTSNGR 145 (568)
Q Consensus 72 -~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~--~~v~~~-~h~~~ItsLafsPd--g~~LasGs~DG~ 145 (568)
..+..+.+|...|++++|+|++++|++++.|++|++||++++ +++..+ .|...|.+++|+|+ +.+|++|+.|+.
T Consensus 143 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~ 222 (330)
T 2hes_X 143 YECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST 222 (330)
T ss_dssp CEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC
T ss_pred eEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe
Confidence 235678899999999999999999999999999999999876 455555 68999999999998 779999999999
Q ss_pred EEEEECCCCCCc----eEEEe-ec-CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 146 VVFYDIRGKPQP----LTVLR-AC-SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 146 V~VWDlrt~~~~----v~~l~-~~-~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
|+|||++..... ..... .. .|...|.+++|++++ ++++++.|+.|++||+.
T Consensus 223 v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-------------~l~s~~~dg~v~iw~~~ 279 (330)
T 2hes_X 223 VRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-------------LIASVGADGVLAVYEEV 279 (330)
T ss_dssp EEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-------------CEEEEETTSCEEEEEEE
T ss_pred EEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-------------EEEEEeCCCEEEEEEcC
Confidence 999999754210 11111 11 388999999998642 35556679999999964
No 44
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.9e-24 Score=222.79 Aligned_cols=283 Identities=18% Similarity=0.255 Sum_probs=201.1
Q ss_pred CccCCCC-EEEEE----------ECCCcEEEEECCCCc---eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEE
Q 008356 1 MYNCKDE-HLASI----------SLSGDLILHNLASGA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWD 66 (568)
Q Consensus 1 afSpdG~-~LasG----------s~DG~V~VWDl~tg~---~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWD 66 (568)
+|+|+++ +|++| +.||.|+|||+.+++ .+..+ .|...|.+++|+++++ +|++++.||.|++||
T Consensus 19 ~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~-~l~~~~~dg~v~vw~ 95 (416)
T 2pm9_A 19 AWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL--QVDSKFNDLDWSHNNK-IIAGALDNGSLELYS 95 (416)
T ss_dssp CBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC--CCSSCEEEEEECSSSS-CEEEEESSSCEEEEC
T ss_pred eeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE--ecCCceEEEEECCCCC-eEEEEccCCeEEEee
Confidence 5899997 89999 889999999998775 33333 3678899999999998 799999999999999
Q ss_pred CCC---CCceeEEeccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEECCCCc------eeeE----eecCCCeEEEEEec
Q 008356 67 TTG---RSPKVSWLKQHSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRR------PSSC----ITYEAPFSSLAFID 132 (568)
Q Consensus 67 l~t---~~~~v~~l~~H~~~VtslafsPd-g~~LaSgs~DGtV~IWDlrt~~------~v~~----~~h~~~ItsLafsP 132 (568)
+.. .......+..|...|++++|+|+ +++|++++.|+.|++||+++++ .... ..|...|.+++|+|
T Consensus 96 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 175 (416)
T 2pm9_A 96 TNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQ 175 (416)
T ss_dssp CSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECS
T ss_pred cccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCC
Confidence 977 23357788899999999999997 8999999999999999999876 3322 25888999999999
Q ss_pred C-CCEEEEEEcCCeEEEEECCCCCCceEEEeec----CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCC---cEE
Q 008356 133 D-DWILTAGTSNGRVVFYDIRGKPQPLTVLRAC----SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD---SIL 204 (568)
Q Consensus 133 d-g~~LasGs~DG~V~VWDlrt~~~~v~~l~~~----~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg---~V~ 204 (568)
+ +.+|++++.||.|++||++... .+..+... +|...|.+++|+|++. .++++++.|+ .|+
T Consensus 176 ~~~~~l~~~~~dg~v~iwd~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----------~~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 176 SLAHVFASAGSSNFASIWDLKAKK-EVIHLSYTSPNSGIKQQLSVVEWHPKNS-----------TRVATATGSDNDPSIL 243 (416)
T ss_dssp SCTTEEEEESSSSCEEEEETTTTE-EEEEECCCCCSSCCCCCEEEEEECSSCT-----------TEEEEEECCSSSCCCC
T ss_pred CCCcEEEEEcCCCCEEEEECCCCC-cceEEeccccccccCCceEEEEECCCCC-----------CEEEEEECCCCCceEE
Confidence 8 7899999999999999999873 33444321 1278899999999752 3344455577 999
Q ss_pred cCCCCCCCc-cccccccccccCCCCCcccCCCCCCccCccCCCCCCCCcccccCCCCCceeeecCCCCCCcCCccccccc
Q 008356 205 MPDPLPSVT-TSSVSLSTAVSGSRPNSRSGPSAEASSLTVGGTGEETPQRSYLRPGGPLARLHAPRSSYNFKDDMEVFSP 283 (568)
Q Consensus 205 VWDlr~~~~-~~s~~~s~~~~~~~sslt~sssG~~ss~~~~s~~e~tP~~~~~~~g~~~~~L~~~r~~~~~~dd~~vfsP 283 (568)
+||++.... ...+.. -....+..+. ++-.+...+++-
T Consensus 244 ~~d~~~~~~~~~~~~~-------------------------------------~~~~~v~~~~-----~s~~~~~~l~s~ 281 (416)
T 2pm9_A 244 IWDLRNANTPLQTLNQ-------------------------------------GHQKGILSLD-----WCHQDEHLLLSS 281 (416)
T ss_dssp EEETTSTTSCSBCCCS-------------------------------------CCSSCEEEEE-----ECSSCSSCEEEE
T ss_pred EEeCCCCCCCcEEeec-------------------------------------CccCceeEEE-----eCCCCCCeEEEE
Confidence 999876421 111000 0012233333 100011111122
Q ss_pred ccccccCCCCcccccccCcCcccccccCCCCCCccc-cCCCCc-ccccccCCCceeeeeeccCCCC
Q 008356 284 LVDVQPITPSLDKLWDGHEGAKKDHLPIDKKPSSML-FPSSSR-RFPYAEDGSNEHSVFDWKSSST 347 (568)
Q Consensus 284 ~~dv~~~~~s~~~~w~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 347 (568)
-.| ..+++||..++..+..+..+..+...+ | +... ++=+..+.....-|||.+....
T Consensus 282 ~~d------g~v~~wd~~~~~~~~~~~~~~~~v~~~~~-s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 282 GRD------NTVLLWNPESAEQLSQFPARGNWCFKTKF-APEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp ESS------SEEEEECSSSCCEEEEEECSSSCCCCEEE-CTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred eCC------CCEEEeeCCCCccceeecCCCCceEEEEE-CCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 122 338889988888877777776554444 7 4444 5555555556667888876553
No 45
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.93 E-value=4e-24 Score=240.80 Aligned_cols=193 Identities=15% Similarity=0.205 Sum_probs=162.4
Q ss_pred ccCCC-CEEEEEECCCcEEEEECCCC-----ceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE
Q 008356 2 YNCKD-EHLASISLSGDLILHNLASG-----AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (568)
Q Consensus 2 fSpdG-~~LasGs~DG~V~VWDl~tg-----~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~ 75 (568)
|++++ ++|++|+.||.|+|||+.+. .....+.+ |...|.+++|+++++ +|++|+.||.|+|||+.++. ...
T Consensus 390 ~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~-h~~~v~~v~~s~~g~-~l~sgs~Dg~v~vwd~~~~~-~~~ 466 (694)
T 3dm0_A 390 TPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTG-HSHFVEDVVLSSDGQ-FALSGSWDGELRLWDLAAGV-STR 466 (694)
T ss_dssp CCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEEC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTE-EEE
T ss_pred ecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecC-CCCcEEEEEECCCCC-EEEEEeCCCcEEEEECCCCc-cee
Confidence 66664 79999999999999998753 23456665 778899999999998 89999999999999998876 367
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe----ecCCCeEEEEEecCC--CEEEEEEcCCeEEEE
Q 008356 76 WLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI----TYEAPFSSLAFIDDD--WILTAGTSNGRVVFY 149 (568)
Q Consensus 76 ~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~----~h~~~ItsLafsPdg--~~LasGs~DG~V~VW 149 (568)
.+.+|...|.+++|+|++++|++++.|++|++||+......... .|...|.+++|+|++ .+|++++.|+.|+||
T Consensus 467 ~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vw 546 (694)
T 3dm0_A 467 RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVW 546 (694)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEE
T ss_pred EEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEE
Confidence 78899999999999999999999999999999998765544332 477889999999986 689999999999999
Q ss_pred ECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 150 DIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 150 Dlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
|++... ....+. +|.+.|++++|+|++++|+ +++.|+.|++||++...
T Consensus 547 d~~~~~-~~~~~~--~h~~~v~~v~~spdg~~l~------------sg~~Dg~i~iwd~~~~~ 594 (694)
T 3dm0_A 547 NLSNCK-LRSTLA--GHTGYVSTVAVSPDGSLCA------------SGGKDGVVLLWDLAEGK 594 (694)
T ss_dssp ETTTCC-EEEEEC--CCSSCEEEEEECTTSSEEE------------EEETTSBCEEEETTTTE
T ss_pred ECCCCc-EEEEEc--CCCCCEEEEEEeCCCCEEE------------EEeCCCeEEEEECCCCc
Confidence 999863 344444 8999999999999766554 44669999999987644
No 46
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.93 E-value=3e-24 Score=241.90 Aligned_cols=178 Identities=20% Similarity=0.331 Sum_probs=153.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE---e
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW---L 77 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~---l 77 (568)
+|+|++++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|+|+++ +|++|+.|++|++||+..... ... .
T Consensus 437 ~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~-h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~~~-~~~~~~~ 513 (694)
T 3dm0_A 437 VLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVG-HTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGECK-YTISEGG 513 (694)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEE-EEECSST
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCcceeEEeC-CCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCCCcc-eeeccCC
Confidence 4789999999999999999999999999988887 777899999999998 799999999999999865542 222 2
Q ss_pred ccCCCCeEEEEEcCCC--CEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCC
Q 008356 78 KQHSAPTAGISFSSDD--KIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (568)
Q Consensus 78 ~~H~~~VtslafsPdg--~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~ 154 (568)
.+|...|.+++|+|++ ..|++++.|++|++||++++++...+ .|...|.+++|+|++++|++|+.||.|+|||+++.
T Consensus 514 ~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 514 EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG 593 (694)
T ss_dssp TSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT
T ss_pred CCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC
Confidence 4688999999999976 68999999999999999999888777 68999999999999999999999999999999987
Q ss_pred CCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 008356 155 PQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 155 ~~~v~~l~~~~h~~~VtsLafspdg~~Las~ 185 (568)
. .+....+...|.+++|+|++.+++++
T Consensus 594 ~----~~~~~~~~~~v~~~~~sp~~~~l~~~ 620 (694)
T 3dm0_A 594 K----KLYSLEANSVIHALCFSPNRYWLCAA 620 (694)
T ss_dssp E----EEECCBCSSCEEEEEECSSSSEEEEE
T ss_pred c----eEEEecCCCcEEEEEEcCCCcEEEEE
Confidence 3 22223456789999999987766543
No 47
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.8e-24 Score=218.85 Aligned_cols=200 Identities=12% Similarity=0.182 Sum_probs=165.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECC--CCceeEEeeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ceeE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLA--SGAKAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKVS 75 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~--tg~~v~~l~~~h~~~Vs~Lafspd--g~~lLaTgs~DGtV~VWDl~t~~-~~v~ 75 (568)
+|+|++++|++|+.||.|+|||+. +++.+..+.+ |...|.+++|+++ ++ +|++++.||.|++||+.++. ....
T Consensus 18 ~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~~~~~~ 95 (379)
T 3jrp_A 18 VLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWKEENGRWSQIA 95 (379)
T ss_dssp EECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCS-EEEEEETTSCEEEEEEETTEEEEEE
T ss_pred EEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecC-CCCcEEEEEeCCCCCCC-EEEEeccCCEEEEEEcCCCceeEee
Confidence 489999999999999999999997 5556667775 7788999999876 66 89999999999999998775 2366
Q ss_pred EeccCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEECCCCcee---eEeecCCCeEEEEEec-------------CCCEE
Q 008356 76 WLKQHSAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRPS---SCITYEAPFSSLAFID-------------DDWIL 137 (568)
Q Consensus 76 ~l~~H~~~VtslafsPd--g~~LaSgs~DGtV~IWDlrt~~~v---~~~~h~~~ItsLafsP-------------dg~~L 137 (568)
.+..|...|.+++|+|+ +++|++++.|+.|++||++.+... ....|...|.+++|+| ++.+|
T Consensus 96 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l 175 (379)
T 3jrp_A 96 VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 175 (379)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEE
T ss_pred eecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEE
Confidence 77889999999999998 999999999999999999987433 2236889999999999 69999
Q ss_pred EEEEcCCeEEEEECCCCCCceEEE-eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCC
Q 008356 138 TAGTSNGRVVFYDIRGKPQPLTVL-RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (568)
Q Consensus 138 asGs~DG~V~VWDlrt~~~~v~~l-~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~ 211 (568)
++++.||.|++||++......... ...+|...|.+++|+|++ ..+.++++++.|+.|++||++..
T Consensus 176 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~---------~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 176 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV---------LLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC---------SSSEEEEEEETTSCEEEEEESST
T ss_pred EEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCC---------CCCCeEEEEeCCCEEEEEeCCCC
Confidence 999999999999998765433222 234799999999999961 01445666677999999998764
No 48
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.93 E-value=9.4e-24 Score=217.14 Aligned_cols=199 Identities=14% Similarity=0.180 Sum_probs=164.5
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEee------------CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC
Q 008356 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELK------------DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT 67 (568)
Q Consensus 1 afSp-dG~~LasGs~DG~V~VWDl~tg~~v~~l~------------~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl 67 (568)
+|+| ++++|++|+.||.|+|||+.+++....+. ..|...|.+++|+|++..+|++++.||.|++||+
T Consensus 50 ~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~ 129 (408)
T 4a11_B 50 DIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDT 129 (408)
T ss_dssp EECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEET
T ss_pred EEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeC
Confidence 4889 99999999999999999998877554443 2377889999999955458999999999999999
Q ss_pred CCCCceeEEeccCCCCeEEEEEcC---CCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCC-EEEEEEc
Q 008356 68 TGRSPKVSWLKQHSAPTAGISFSS---DDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDW-ILTAGTS 142 (568)
Q Consensus 68 ~t~~~~v~~l~~H~~~VtslafsP---dg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~-~LasGs~ 142 (568)
.+.+. . ....+...+.++.|.+ ++.++++++.|+.|++||+++++.+..+ .|...|.+++|+|++. +|++++.
T Consensus 130 ~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~ 207 (408)
T 4a11_B 130 NTLQT-A-DVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASA 207 (408)
T ss_dssp TTTEE-E-EEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEET
T ss_pred CCCcc-c-eeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcC
Confidence 88763 3 3334788899999998 4459999999999999999999888777 5889999999999988 5899999
Q ss_pred CCeEEEEECCCCCCceEEEee-------------cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 143 NGRVVFYDIRGKPQPLTVLRA-------------CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 143 DG~V~VWDlrt~~~~v~~l~~-------------~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
||.|++||++....+...+.. ..|...|.+++|+|++++++++ +.|+.|++||++
T Consensus 208 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~------------~~dg~i~vwd~~ 275 (408)
T 4a11_B 208 DSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV------------GTDNRMRLWNSS 275 (408)
T ss_dssp TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE------------ETTSCEEEEETT
T ss_pred CCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe------------cCCCeEEEEECC
Confidence 999999999987544444421 2688999999999976655544 569999999998
Q ss_pred CCCc
Q 008356 210 PSVT 213 (568)
Q Consensus 210 ~~~~ 213 (568)
....
T Consensus 276 ~~~~ 279 (408)
T 4a11_B 276 NGEN 279 (408)
T ss_dssp TCCB
T ss_pred CCcc
Confidence 7553
No 49
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.93 E-value=8.2e-24 Score=211.88 Aligned_cols=194 Identities=14% Similarity=0.166 Sum_probs=163.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCce---eEEeeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc-eeE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAK---AAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP-KVS 75 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~---v~~l~~-~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~-~v~ 75 (568)
+|+|++++|++++ ||.|++||+.+++. +..+.. .|...|.+++|+|+++ +|++++.||.|++||+...+. ...
T Consensus 58 ~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~~~~~ 135 (337)
T 1gxr_A 58 TISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC-TLIVGGEASTLSIWDLAAPTPRIKA 135 (337)
T ss_dssp EECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS-EEEEEESSSEEEEEECCCC--EEEE
T ss_pred EEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCCcceee
Confidence 4889999999998 99999999987653 233331 3778899999999997 899999999999999987653 355
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCC
Q 008356 76 WLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (568)
Q Consensus 76 ~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~ 154 (568)
.+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+ .|...|.+++|+|++++|++++.||.|++||+++.
T Consensus 136 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~ 215 (337)
T 1gxr_A 136 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG 215 (337)
T ss_dssp EEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred ecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCC
Confidence 67789999999999999999999999999999999999888777 58899999999999999999999999999999987
Q ss_pred CCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 155 PQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 155 ~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
. ....+ .|...+.+++|+|++++++++ +.|+.|++||++...
T Consensus 216 ~-~~~~~---~~~~~v~~~~~s~~~~~l~~~------------~~~~~i~~~~~~~~~ 257 (337)
T 1gxr_A 216 R-QLQQH---DFTSQIFSLGYCPTGEWLAVG------------MESSNVEVLHVNKPD 257 (337)
T ss_dssp E-EEEEE---ECSSCEEEEEECTTSSEEEEE------------ETTSCEEEEETTSSC
T ss_pred c-eEeee---cCCCceEEEEECCCCCEEEEE------------cCCCcEEEEECCCCC
Confidence 3 23333 477899999999976655544 558899999987644
No 50
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.93 E-value=2e-24 Score=225.22 Aligned_cols=207 Identities=13% Similarity=0.151 Sum_probs=169.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++|++++.||.|++||+.+++....+.. + ..+....|+++++ +|++|+.||.|++||+.+.. ....+..|
T Consensus 63 ~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~-~-~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~-~~~~~~~h 138 (420)
T 3vl1_A 63 TFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKR-A-DYTAVDTAKLQMR-RFILGTTEGDIKVLDSNFNL-QREIDQAH 138 (420)
T ss_dssp EEEEEETTEEEEEETTEEEEEECCSEETTTTSCS-C-CEEEEEEECSSSC-EEEEEETTSCEEEECTTSCE-EEEETTSS
T ss_pred eeeecCCeEEEEEcCCcEEEEEecccceeeEEec-C-CceEEEEEecCCC-EEEEEECCCCEEEEeCCCcc-eeeecccc
Confidence 4889999999999999999999987776655554 2 5566667899987 89999999999999998776 35666799
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~ 159 (568)
...|++++|+|++++|++++.|+.|++||+++++.+..+ .|...|.+++|+|++++|++++.|+.|++||+++.. ...
T Consensus 139 ~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~ 217 (420)
T 3vl1_A 139 VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT-TIH 217 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE-EEE
T ss_pred cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc-eeE
Confidence 999999999999999999999999999999999888777 589999999999999999999999999999999874 344
Q ss_pred EEee-cCCCCCeeEEEEccCCCeE---------EEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 160 VLRA-CSSSEAVSSLCWQRAKPVF---------IDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 160 ~l~~-~~h~~~VtsLafspdg~~L---------as~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
.+.. ..|...|.+++|.+.+... .......++.++++++.|+.|++||++...
T Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~ 280 (420)
T 3vl1_A 218 TFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE 280 (420)
T ss_dssp EECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC
T ss_pred EeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc
Confidence 4432 2467788888887653221 111123467788888889999999997654
No 51
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.92 E-value=5.7e-24 Score=222.57 Aligned_cols=198 Identities=19% Similarity=0.295 Sum_probs=169.2
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCC-------ceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc
Q 008356 1 MYNC-KDEHLASISLSGDLILHNLASG-------AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (568)
Q Consensus 1 afSp-dG~~LasGs~DG~V~VWDl~tg-------~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~ 72 (568)
+|+| ++++|++|+.||.|+|||+.++ +.+..+.+ |...|.+++|+|+++++|++++.||.|++||+.+++.
T Consensus 88 ~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 166 (402)
T 2aq5_A 88 AWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEG-HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAA 166 (402)
T ss_dssp EECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEEC-CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEE
T ss_pred EeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecC-CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCc
Confidence 4789 8999999999999999999887 56777776 7788999999999866899999999999999998764
Q ss_pred eeEEe--ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe--ecCCC-eEEEEEecCCCEEEEE---EcCC
Q 008356 73 KVSWL--KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAP-FSSLAFIDDDWILTAG---TSNG 144 (568)
Q Consensus 73 ~v~~l--~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~--~h~~~-ItsLafsPdg~~LasG---s~DG 144 (568)
+..+ ..|...|++++|+|++++|++++.|+.|++||+++++.+..+ .|.+. +.+++|+|++++|++| +.|+
T Consensus 167 -~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~ 245 (402)
T 2aq5_A 167 -VLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSER 245 (402)
T ss_dssp -EEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCE
T ss_pred -cEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCc
Confidence 5566 789999999999999999999999999999999999888776 45554 8999999999999999 7899
Q ss_pred eEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 145 RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 145 ~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
.|++||++....+..... ..|...|.+++|+|++++++ ++++.|+.|++||+....
T Consensus 246 ~i~iwd~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~-----------~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 246 QVALWDTKHLEEPLSLQE-LDTSSGVLLPFFDPDTNIVY-----------LCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp EEEEEETTBCSSCSEEEE-CCCCSSCEEEEEETTTTEEE-----------EEETTCSCEEEEEECSST
T ss_pred eEEEEcCccccCCceEEe-ccCCCceeEEEEcCCCCEEE-----------EEEcCCCeEEEEEecCCC
Confidence 999999998765544443 35778899999999866543 344569999999987654
No 52
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.8e-24 Score=221.92 Aligned_cols=202 Identities=14% Similarity=0.314 Sum_probs=166.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCC----CceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC-----
Q 008356 1 MYNCKDEHLASISLSGDLILHNLAS----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS----- 71 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~t----g~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~----- 71 (568)
+|+|++++|++++.||.|++||+.+ .+.+..+.. |...|.+++|+|++..+|++++.||.|++||+....
T Consensus 74 ~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 152 (416)
T 2pm9_A 74 DWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSN-HSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN 152 (416)
T ss_dssp EECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCC-SSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT
T ss_pred EECCCCCeEEEEccCCeEEEeecccccccccchhhccC-CccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc
Confidence 4899999999999999999999987 346667765 777899999999844489999999999999998765
Q ss_pred -ce--eEEeccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEECCCCceeeEeec-------CCCeEEEEEecCC-CEEEE
Q 008356 72 -PK--VSWLKQHSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCITY-------EAPFSSLAFIDDD-WILTA 139 (568)
Q Consensus 72 -~~--v~~l~~H~~~VtslafsPd-g~~LaSgs~DGtV~IWDlrt~~~v~~~~h-------~~~ItsLafsPdg-~~Las 139 (568)
.. ......|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+.. ...|.+++|+|++ .+|++
T Consensus 153 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 153 YTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp CCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE
T ss_pred ccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEE
Confidence 22 2234679999999999998 79999999999999999999988877743 6889999999997 69999
Q ss_pred EEcCC---eEEEEECCCCCCceEEEeecCCCCCeeEEEEcc-CCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCccc
Q 008356 140 GTSNG---RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQR-AKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTS 215 (568)
Q Consensus 140 Gs~DG---~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafsp-dg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~~ 215 (568)
++.|+ .|++||++....+...+. .+|...|.+++|+| ++++| ++++.|+.|++||++......
T Consensus 233 ~~~d~~~~~i~~~d~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~~l------------~s~~~dg~v~~wd~~~~~~~~ 299 (416)
T 2pm9_A 233 ATGSDNDPSILIWDLRNANTPLQTLN-QGHQKGILSLDWCHQDEHLL------------LSSGRDNTVLLWNPESAEQLS 299 (416)
T ss_dssp EECCSSSCCCCEEETTSTTSCSBCCC-SCCSSCEEEEEECSSCSSCE------------EEEESSSEEEEECSSSCCEEE
T ss_pred EECCCCCceEEEEeCCCCCCCcEEee-cCccCceeEEEeCCCCCCeE------------EEEeCCCCEEEeeCCCCccce
Confidence 99998 999999998654444332 15889999999999 55554 444669999999998765443
Q ss_pred c
Q 008356 216 S 216 (568)
Q Consensus 216 s 216 (568)
.
T Consensus 300 ~ 300 (416)
T 2pm9_A 300 Q 300 (416)
T ss_dssp E
T ss_pred e
Confidence 3
No 53
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.92 E-value=2.8e-23 Score=209.06 Aligned_cols=195 Identities=15% Similarity=0.175 Sum_probs=162.3
Q ss_pred CccCC-CCEEEEEECCCcEEEEECCCCc-----eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee
Q 008356 1 MYNCK-DEHLASISLSGDLILHNLASGA-----KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (568)
Q Consensus 1 afSpd-G~~LasGs~DG~V~VWDl~tg~-----~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v 74 (568)
+|+|+ +++|++|+.||+|+|||+.+.+ ....+.+ |...|.+++|+|+++ +|++++.|+.|++|+...... .
T Consensus 45 ~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~-h~~~V~~~~~s~dg~-~l~s~~~d~~i~~~~~~~~~~-~ 121 (340)
T 4aow_A 45 ATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRG-HSHFVSDVVISSDGQ-FALSGSWDGTLRLWDLTTGTT-T 121 (340)
T ss_dssp EECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTEE-E
T ss_pred EEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeC-CCCCEEEEEECCCCC-EEEEEcccccceEEeecccce-e
Confidence 48887 5899999999999999997654 3455665 778899999999998 899999999999999987763 5
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe--ecCCCeEEEEEecC--CCEEEEEEcCCeEEEEE
Q 008356 75 SWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDD--DWILTAGTSNGRVVFYD 150 (568)
Q Consensus 75 ~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~--~h~~~ItsLafsPd--g~~LasGs~DG~V~VWD 150 (568)
.....+...+..+.+.+++++|++++.|+.+++||+......... .|...+.+++|+++ ..++++++.|+.|++||
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d 201 (340)
T 4aow_A 122 RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWN 201 (340)
T ss_dssp EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEE
T ss_pred eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEE
Confidence 566778888999999999999999999999999999876554433 57889999999986 46788999999999999
Q ss_pred CCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 151 IRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 151 lrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
++... ....+. +|...|++++|+|++++|+ +++.|+.|++||++....
T Consensus 202 ~~~~~-~~~~~~--~h~~~v~~~~~s~~~~~l~------------s~s~Dg~i~iwd~~~~~~ 249 (340)
T 4aow_A 202 LANCK-LKTNHI--GHTGYLNTVTVSPDGSLCA------------SGGKDGQAMLWDLNEGKH 249 (340)
T ss_dssp TTTTE-EEEEEC--CCSSCEEEEEECTTSSEEE------------EEETTCEEEEEETTTTEE
T ss_pred CCCCc-eeeEec--CCCCcEEEEEECCCCCEEE------------EEeCCCeEEEEEeccCce
Confidence 99873 334444 7999999999999766554 446699999999986544
No 54
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.92 E-value=6.2e-23 Score=215.20 Aligned_cols=193 Identities=16% Similarity=0.267 Sum_probs=163.3
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCC
Q 008356 3 NCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSA 82 (568)
Q Consensus 3 SpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~ 82 (568)
.++++.+++++.||.|++||+.+++....+...|...|.+++|+|+++ +|++|+.||.|++||+.+.+ .+..+..|..
T Consensus 100 ~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~-~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~ 177 (401)
T 4aez_A 100 DWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGS-FLSVGLGNGLVDIYDVESQT-KLRTMAGHQA 177 (401)
T ss_dssp EECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTTCC-EEEEECCCSS
T ss_pred eecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCC-EEEEECCCCeEEEEECcCCe-EEEEecCCCC
Confidence 334566888999999999999999998888877888999999999997 89999999999999998876 4677889999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEECCC-CceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 008356 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGS-RRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (568)
Q Consensus 83 ~VtslafsPdg~~LaSgs~DGtV~IWDlrt-~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~ 160 (568)
.|.+++|+ +++|++++.|+.|++||++. ...+..+ .|...|.+++|+|++++|++|+.|+.|++||+++.. +...
T Consensus 178 ~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-~~~~ 254 (401)
T 4aez_A 178 RVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSI-PKFT 254 (401)
T ss_dssp CEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSS-EEEE
T ss_pred ceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC-ccEE
Confidence 99999994 67999999999999999994 4445454 689999999999999999999999999999999863 3444
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEe--cCCCcEEcCCCCCCCc
Q 008356 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGG--AVGDSILMPDPLPSVT 213 (568)
Q Consensus 161 l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~--s~Dg~V~VWDlr~~~~ 213 (568)
+. .|...|.+++|+|++..+ ++++ +.|+.|++||++....
T Consensus 255 ~~--~~~~~v~~~~~~p~~~~l-----------l~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 255 KT--NHNAAVKAVAWCPWQSNL-----------LATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp EC--CCSSCCCEEEECTTSTTE-----------EEEECCTTTCEEEEEETTTCCE
T ss_pred ec--CCcceEEEEEECCCCCCE-----------EEEecCCCCCEEEEEECCCCCE
Confidence 44 789999999999975443 3333 3699999999976543
No 55
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.92 E-value=1.1e-23 Score=214.76 Aligned_cols=198 Identities=14% Similarity=0.180 Sum_probs=165.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc--eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce-eEEe
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK-VSWL 77 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~--~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~-v~~l 77 (568)
+|+|++++|++++.||.|+|||+.+++ .+..+.+ |...|.+++|+|+++ +|++++.||.|++||+...+.. ...+
T Consensus 15 ~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~ 92 (372)
T 1k8k_C 15 AWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSN-RIVTCGTDRNAYVWTLKGRTWKPTLVI 92 (372)
T ss_dssp EECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTT-EEEEEETTSCEEEEEEETTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCC-EEEEEcCCCeEEEEECCCCeeeeeEEe
Confidence 489999999999999999999998887 7778876 778899999999998 8999999999999999776522 3345
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCce---eeEe--ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECC
Q 008356 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP---SSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIR 152 (568)
Q Consensus 78 ~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~---v~~~--~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlr 152 (568)
..|...|.+++|+|++++|++++.|+.|++||++.++. ...+ .|...|.+++|+|++++|++++.||.|++||++
T Consensus 93 ~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~ 172 (372)
T 1k8k_C 93 LRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 172 (372)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECC
T ss_pred ecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcc
Confidence 77999999999999999999999999999999998763 2222 478899999999999999999999999999975
Q ss_pred C-----------------CCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCcc
Q 008356 153 G-----------------KPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (568)
Q Consensus 153 t-----------------~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~ 214 (568)
. ....+..+. .|...|.+++|+|++++|+ +++.|+.|++||++.....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~------------~~~~d~~i~i~d~~~~~~~ 237 (372)
T 1k8k_C 173 IKEVEERPAPTPWGSKMPFGELMFESS--SSCGWVHGVCFSANGSRVA------------WVSHDSTVCLADADKKMAV 237 (372)
T ss_dssp CTTTSCCCCCBTTBSCCCTTCEEEECC--CCSSCEEEEEECSSSSEEE------------EEETTTEEEEEEGGGTTEE
T ss_pred cccccccccccccccccchhhheEecC--CCCCeEEEEEECCCCCEEE------------EEeCCCEEEEEECCCCcee
Confidence 2 113333333 7899999999999765544 4466999999999865543
No 56
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.92 E-value=9.6e-24 Score=213.56 Aligned_cols=197 Identities=12% Similarity=0.208 Sum_probs=160.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc-eeEEeeCCC---CCcEEEEE----EccCCCeEEEEEeCCCeEEEEECCCCCc
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGA-KAAELKDPN---EQVLRVLD----YSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~-~v~~l~~~h---~~~Vs~La----fspdg~~lLaTgs~DGtV~VWDl~t~~~ 72 (568)
+|++++++|++++.||.|++||+.+++ .+..+..+. ...+.+++ |+++++ +|++++.||.|++||++..+
T Consensus 124 ~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~- 201 (357)
T 3i2n_A 124 GIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMA- 201 (357)
T ss_dssp GCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTTE-
T ss_pred ccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECccCc-
Confidence 378999999999999999999999887 667775432 34788888 678887 89999999999999998877
Q ss_pred eeEEeccCCCCeEEEEEcC---CCCEEEEEeCCCeEEEEECCCCceeeEe------ecCCCeEEEEEecCCC-EEEEEEc
Q 008356 73 KVSWLKQHSAPTAGISFSS---DDKIIASVGLDKKLYTYDPGSRRPSSCI------TYEAPFSSLAFIDDDW-ILTAGTS 142 (568)
Q Consensus 73 ~v~~l~~H~~~VtslafsP---dg~~LaSgs~DGtV~IWDlrt~~~v~~~------~h~~~ItsLafsPdg~-~LasGs~ 142 (568)
......|...|.+++|+| ++++|++++.|+.|++||+++++.+..+ .|...|.+++|+|++. +|++++.
T Consensus 202 -~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 280 (357)
T 3i2n_A 202 -LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGG 280 (357)
T ss_dssp -EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEET
T ss_pred -eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeC
Confidence 345577899999999999 9999999999999999999887654433 5889999999999998 8999999
Q ss_pred CCeEEEEECCCCCCc----------------eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcC
Q 008356 143 NGRVVFYDIRGKPQP----------------LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMP 206 (568)
Q Consensus 143 DG~V~VWDlrt~~~~----------------v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VW 206 (568)
||.|++||++..... ........|...|++++|+|++++|+ ++++.|+.|++|
T Consensus 281 dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-----------~s~~~d~~i~iw 349 (357)
T 3i2n_A 281 AGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLC-----------VCSSFDQTVRVL 349 (357)
T ss_dssp TSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEE-----------EEEETTSEEEEE
T ss_pred CCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEE-----------EEecCCCcEEEE
Confidence 999999999865332 12222337999999999999876654 234669999999
Q ss_pred CCCCC
Q 008356 207 DPLPS 211 (568)
Q Consensus 207 Dlr~~ 211 (568)
|+...
T Consensus 350 ~~~~~ 354 (357)
T 3i2n_A 350 IVTKL 354 (357)
T ss_dssp EECC-
T ss_pred ECCCc
Confidence 98764
No 57
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.92 E-value=5.3e-23 Score=215.74 Aligned_cols=192 Identities=17% Similarity=0.259 Sum_probs=161.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++|++|+.||.|++||+.+++.+..+.. |...|.+++|+ +. +|++++.||.|++||++.....+..+..|
T Consensus 141 ~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~~--~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 216 (401)
T 4aez_A 141 KWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG-HQARVGCLSWN--RH-VLSSGSRSGAIHHHDVRIANHQIGTLQGH 216 (401)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEEE--TT-EEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EECCCCCEEEEECCCCeEEEEECcCCeEEEEecC-CCCceEEEEEC--CC-EEEEEcCCCCEEEEecccCcceeeEEcCC
Confidence 4899999999999999999999999999998886 77889999995 34 89999999999999998665567888999
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCC-CEEEEEE--cCCeEEEEECCCCCC
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDD-WILTAGT--SNGRVVFYDIRGKPQ 156 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg-~~LasGs--~DG~V~VWDlrt~~~ 156 (568)
...|.+++|+|++++|++++.|+.|++||+++++++..+ .|...|.+++|+|++ .++++++ .|+.|++||+++..
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~- 295 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA- 295 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC-
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC-
Confidence 999999999999999999999999999999999888777 688999999999976 5666655 79999999999873
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 157 ~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
++..+ .+...|.+++|+|++++++++. +..|+.|++||+..
T Consensus 296 ~~~~~---~~~~~v~~~~~s~~~~~l~~~~----------g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 296 RVNTV---DAGSQVTSLIWSPHSKEIMSTH----------GFPDNNLSIWSYSS 336 (401)
T ss_dssp EEEEE---ECSSCEEEEEECSSSSEEEEEE----------CTTTCEEEEEEEET
T ss_pred EEEEE---eCCCcEEEEEECCCCCeEEEEe----------ecCCCcEEEEecCC
Confidence 34444 3678899999999887776531 22356666666544
No 58
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.4e-23 Score=211.94 Aligned_cols=196 Identities=13% Similarity=0.192 Sum_probs=162.9
Q ss_pred ccCC--CCEEEEEECCCcEEEEECCCCc--eeEEeeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-cee
Q 008356 2 YNCK--DEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKV 74 (568)
Q Consensus 2 fSpd--G~~LasGs~DG~V~VWDl~tg~--~v~~l~~~h~~~Vs~Lafspd--g~~lLaTgs~DGtV~VWDl~t~~-~~v 74 (568)
|+++ +++|++++.||.|+|||+.+++ .+..+.. |...|.+++|+|+ +. +|++++.|+.|++||+.... ...
T Consensus 63 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~ 140 (379)
T 3jrp_A 63 WAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSP 140 (379)
T ss_dssp ECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCCE
T ss_pred eCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecC-CCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCceee
Confidence 6666 8999999999999999999887 5555654 7788999999999 76 89999999999999998763 235
Q ss_pred EEeccCCCCeEEEEEcC-------------CCCEEEEEeCCCeEEEEECCCCcee----eEe-ecCCCeEEEEEecC---
Q 008356 75 SWLKQHSAPTAGISFSS-------------DDKIIASVGLDKKLYTYDPGSRRPS----SCI-TYEAPFSSLAFIDD--- 133 (568)
Q Consensus 75 ~~l~~H~~~VtslafsP-------------dg~~LaSgs~DGtV~IWDlrt~~~v----~~~-~h~~~ItsLafsPd--- 133 (568)
..+..|...|.+++|+| ++.+|++++.|+.|++||++++... ..+ .|...|.+++|+|+
T Consensus 141 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 220 (379)
T 3jrp_A 141 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 220 (379)
T ss_dssp EEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred EEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCC
Confidence 56778999999999999 6999999999999999999876532 233 58899999999999
Q ss_pred CCEEEEEEcCCeEEEEECCCCCCce--EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCC
Q 008356 134 DWILTAGTSNGRVVFYDIRGKPQPL--TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (568)
Q Consensus 134 g~~LasGs~DG~V~VWDlrt~~~~v--~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~ 211 (568)
+++|++++.||.|+|||++....+. ..+....|...|.+++|+|++++|+++ +.|+.|++||+...
T Consensus 221 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~------------~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 221 RSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS------------GGDNKVTLWKENLE 288 (379)
T ss_dssp SEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEE------------ESSSSEEEEEEEET
T ss_pred CCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEe------------cCCCcEEEEeCCCC
Confidence 8999999999999999999864332 233333588999999999987665554 55999999998753
No 59
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.92 E-value=1.3e-23 Score=220.35 Aligned_cols=193 Identities=14% Similarity=0.224 Sum_probs=155.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc-----------eeEEeeCCCC------------CcEEEEEEccCCC-eEEEEE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGA-----------KAAELKDPNE------------QVLRVLDYSRNSR-HLLVTA 56 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~-----------~v~~l~~~h~------------~~Vs~Lafspdg~-~lLaTg 56 (568)
+|+|+|++||+|+.||.|+|||+.+++ ....+.+ |. ..|.+++|+|++. .+|+++
T Consensus 35 ~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~ 113 (447)
T 3dw8_B 35 EFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQS-HEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLS 113 (447)
T ss_dssp EECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEEC-CCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccc-ccccccccccccccCceEEEEEcCCCCcceEEEe
Confidence 489999999999999999999998776 4677876 55 7799999999973 379999
Q ss_pred eCCCeEEEEECCCCCce---------------------------------------eEEeccCCCCeEEEEEcCCCCEEE
Q 008356 57 GDDGTLHLWDTTGRSPK---------------------------------------VSWLKQHSAPTAGISFSSDDKIIA 97 (568)
Q Consensus 57 s~DGtV~VWDl~t~~~~---------------------------------------v~~l~~H~~~VtslafsPdg~~La 97 (568)
+.|+.|++||+...... .....+|...|++++|+|++++|+
T Consensus 114 s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 193 (447)
T 3dw8_B 114 TNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYL 193 (447)
T ss_dssp ECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEE
T ss_pred CCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEE
Confidence 99999999998653210 122468999999999999999999
Q ss_pred EEeCCCeEEEEECCC-CceeeEe--------ecCCCeEEEEEecCC-CEEEEEEcCCeEEEEECCCCCCc---eEEEeec
Q 008356 98 SVGLDKKLYTYDPGS-RRPSSCI--------TYEAPFSSLAFIDDD-WILTAGTSNGRVVFYDIRGKPQP---LTVLRAC 164 (568)
Q Consensus 98 Sgs~DGtV~IWDlrt-~~~v~~~--------~h~~~ItsLafsPdg-~~LasGs~DG~V~VWDlrt~~~~---v~~l~~~ 164 (568)
++ .|+.|++||++. ++.+..+ .|...|.+++|+|++ ++|++|+.||.|++||++..... ...+.
T Consensus 194 s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-- 270 (447)
T 3dw8_B 194 SA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFE-- 270 (447)
T ss_dssp EE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEEC--
T ss_pred Ee-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEec--
Confidence 98 899999999994 4444432 588899999999998 99999999999999999987531 45555
Q ss_pred CCCC------------CeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 165 SSSE------------AVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 165 ~h~~------------~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
.|.. .|.+++|+|++++|+++ +. +.|++||++.
T Consensus 271 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~------------~~-~~v~iwd~~~ 315 (447)
T 3dw8_B 271 EPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR------------DY-LSVKVWDLNM 315 (447)
T ss_dssp CC-----CCHHHHHTTCEEEEEECTTSSEEEEE------------ES-SEEEEEETTC
T ss_pred cCCCccccccccccCceEEEEEECCCCCEEEEe------------eC-CeEEEEeCCC
Confidence 5554 89999999976665444 55 9999999976
No 60
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.92 E-value=3.4e-23 Score=225.21 Aligned_cols=187 Identities=21% Similarity=0.334 Sum_probs=161.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++|++++.||.|++||. +++.+..+.+ |...|.+++|+|+++ +|++++.|+.|++||.... .+..+.+|
T Consensus 351 ~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~-~~~~v~~~~~s~dg~-~l~~~~~d~~v~~~~~~~~--~~~~~~~~ 425 (577)
T 2ymu_A 351 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTG-HSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRNGQ--LLQTLTGH 425 (577)
T ss_dssp EECTTSSEEEEEETTSEEEEEET-TCCEEEEEEC-CSSCEEEEEECTTSS-CEEEEETTSEEEEECTTCC--EEEEEECC
T ss_pred EECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecC-CCCCeEEEEECCCCC-EEEEEeCCCEEEEEeCCCC--EEEEecCC
Confidence 47899999999999999999995 6778888886 677899999999998 7999999999999997543 36778899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~ 160 (568)
...|++++|+|++++|++++.|+.|++||+..........|...|.+++|+|++++|++++.|+.|++||... +.+..
T Consensus 426 ~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~--~~~~~ 503 (577)
T 2ymu_A 426 SSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG--QLLQT 503 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS--CEEEE
T ss_pred CCCeEEEEECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC--CEEEE
Confidence 9999999999999999999999999999975443333447999999999999999999999999999999654 34455
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCC
Q 008356 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (568)
Q Consensus 161 l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDl 208 (568)
+. +|...|++++|+|++++|+++ +.|+.|++||.
T Consensus 504 ~~--~h~~~v~~l~~s~dg~~l~s~------------~~dg~v~lwd~ 537 (577)
T 2ymu_A 504 LT--GHSSSVRGVAFSPDGQTIASA------------SDDKTVKLWNR 537 (577)
T ss_dssp EE--CCSSCEEEEEECTTSSCEEEE------------ETTSEEEEECT
T ss_pred Ee--CCCCCEEEEEEcCCCCEEEEE------------ECcCEEEEEeC
Confidence 55 899999999999987766555 56999999995
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.92 E-value=8.6e-24 Score=218.30 Aligned_cols=201 Identities=16% Similarity=0.153 Sum_probs=167.2
Q ss_pred CCCCE-EEEEECCCcEEEEECCC------CceeE-----Eee------CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEE
Q 008356 4 CKDEH-LASISLSGDLILHNLAS------GAKAA-----ELK------DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLW 65 (568)
Q Consensus 4 pdG~~-LasGs~DG~V~VWDl~t------g~~v~-----~l~------~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VW 65 (568)
|++++ |++++.||.|++||+.+ ++.+. .+. ..|...|.+++|+|++ +|++++.||.|++|
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQIS 212 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEE
Confidence 89999 99999999999999988 66655 664 3467788999999998 79999999999999
Q ss_pred ECCCCCceeEEecc---C---CCCeEEEEEcCCCCEEEEEeCC---CeEEEEECCCCceeeEe-e-------------cC
Q 008356 66 DTTGRSPKVSWLKQ---H---SAPTAGISFSSDDKIIASVGLD---KKLYTYDPGSRRPSSCI-T-------------YE 122 (568)
Q Consensus 66 Dl~t~~~~v~~l~~---H---~~~VtslafsPdg~~LaSgs~D---GtV~IWDlrt~~~v~~~-~-------------h~ 122 (568)
|++..+ .+..+.. | ...|.+++|+|++++|++++.| +.|++||+++++.+..+ . |.
T Consensus 213 d~~~~~-~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (397)
T 1sq9_A 213 ELSTLR-PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHS 291 (397)
T ss_dssp ETTTTE-EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBS
T ss_pred ECCCCc-eeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccC
Confidence 998876 4666777 8 9999999999999999999999 99999999999888777 4 88
Q ss_pred CCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeec----CC---------------CCCeeEEEEccCCCeEE
Q 008356 123 APFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRAC----SS---------------SEAVSSLCWQRAKPVFI 183 (568)
Q Consensus 123 ~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~----~h---------------~~~VtsLafspdg~~La 183 (568)
..|.+++|+|++++|++++.||.|+|||++... ++..+... .| ...|++++|+|++++++
T Consensus 292 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~ 370 (397)
T 1sq9_A 292 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE-RITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSG 370 (397)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBS
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc-eeEEEecccCcccchhhhhccccccccccCCceeEEEecccccccc
Confidence 999999999999999999999999999999873 34444311 35 89999999999986665
Q ss_pred EeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 184 DETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 184 s~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
.+ ..+..+|++++.|+.|++||+..
T Consensus 371 ~~--~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 371 MG--ADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp TT--CTTSCEEEEEETTTEEEEEEEEC
T ss_pred cc--ccccceEEEecCCCcEEEEEcCC
Confidence 54 23456788888899999999754
No 62
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.92 E-value=9.4e-23 Score=206.37 Aligned_cols=194 Identities=13% Similarity=0.178 Sum_probs=159.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeC----------------------------------------------
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD---------------------------------------------- 34 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~---------------------------------------------- 34 (568)
+|+|++++|++++.||.|++||+.+++.+..+..
T Consensus 81 ~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~ 160 (369)
T 3zwl_B 81 DVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK 160 (369)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc
Confidence 3677788888888888888888777665544431
Q ss_pred ----------CCCC--cEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCC
Q 008356 35 ----------PNEQ--VLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD 102 (568)
Q Consensus 35 ----------~h~~--~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~D 102 (568)
.+.. .+.+++|+++++ +|++++.||.|++||+......+..+..|...|.+++|+|++++|++++.|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 239 (369)
T 3zwl_B 161 VSEEPIHKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRD 239 (369)
T ss_dssp ECSSCSEEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred cccceeeeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCC
Confidence 0111 567777777776 788888999999999987544577788899999999999999999999999
Q ss_pred CeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCC--------------eEEEEECCCCCCceEEEeecCCCC
Q 008356 103 KKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNG--------------RVVFYDIRGKPQPLTVLRACSSSE 168 (568)
Q Consensus 103 GtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG--------------~V~VWDlrt~~~~v~~l~~~~h~~ 168 (568)
+.|++||+++++.+..+.+...+.+++|+|+++++++++.++ .|++||+.... ++..+. +|..
T Consensus 240 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~-~~~~~~--~~~~ 316 (369)
T 3zwl_B 240 TNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEE-EIGRVQ--GHFG 316 (369)
T ss_dssp SEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCC-EEEEEE--CCSS
T ss_pred ceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCc-chhhee--cccC
Confidence 999999999999999999999999999999999999999988 89999999874 445555 7999
Q ss_pred CeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 169 AVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 169 ~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
.|++++|+|++++|++ ++.|+.|++||+..
T Consensus 317 ~v~~~~~s~~~~~l~s------------~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 317 PLNTVAISPQGTSYAS------------GGEDGFIRLHHFEK 346 (369)
T ss_dssp CEEEEEECTTSSEEEE------------EETTSEEEEEEECH
T ss_pred cEEEEEECCCCCEEEE------------EcCCCeEEEEECcc
Confidence 9999999997665544 46699999999865
No 63
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.92 E-value=2.6e-24 Score=219.38 Aligned_cols=192 Identities=15% Similarity=0.210 Sum_probs=155.6
Q ss_pred ccC--CCCEEEEEECCCcEEEEECCCCc--eeEEeeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCCc--e
Q 008356 2 YNC--KDEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRSP--K 73 (568)
Q Consensus 2 fSp--dG~~LasGs~DG~V~VWDl~tg~--~v~~l~~~h~~~Vs~Lafspd--g~~lLaTgs~DGtV~VWDl~t~~~--~ 73 (568)
|++ ++++|++|+.|++|+|||+++++ .+..+.+ |...|.+++|+|+ +. +|++|+.|+.|++||+..... .
T Consensus 65 ~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~-h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 65 WAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAG-HDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp ECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECC-CSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEEE
T ss_pred eCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccC-CCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcce
Confidence 554 48999999999999999998774 4555665 7778999999998 54 899999999999999986532 1
Q ss_pred eEEeccCCCCeEEEEEcCC-----------------CCEEEEEeCCCeEEEEECCCC---ceeeEe-ecCCCeEEEEEec
Q 008356 74 VSWLKQHSAPTAGISFSSD-----------------DKIIASVGLDKKLYTYDPGSR---RPSSCI-TYEAPFSSLAFID 132 (568)
Q Consensus 74 v~~l~~H~~~VtslafsPd-----------------g~~LaSgs~DGtV~IWDlrt~---~~v~~~-~h~~~ItsLafsP 132 (568)
...+..|...|.+++|+|+ +++|++++.|++|++||++.. +++..+ .|...|.+++|+|
T Consensus 143 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp 222 (316)
T 3bg1_A 143 KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP 222 (316)
T ss_dssp CCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC
T ss_pred eeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC
Confidence 3456789999999999997 478999999999999999765 234444 6889999999999
Q ss_pred CC----CEEEEEEcCCeEEEEECCCCC---CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEc
Q 008356 133 DD----WILTAGTSNGRVVFYDIRGKP---QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILM 205 (568)
Q Consensus 133 dg----~~LasGs~DG~V~VWDlrt~~---~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~V 205 (568)
++ ++|++++.|+.|+|||++... .....+. .|...|.+++|+|++++|+++ +.|+.|++
T Consensus 223 ~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~--~~~~~v~~v~~sp~g~~las~------------~~D~~v~l 288 (316)
T 3bg1_A 223 SIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLH--KFNDVVWHVSWSITANILAVS------------GGDNKVTL 288 (316)
T ss_dssp CSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEE--ECSSCEEEEEECTTTCCEEEE------------ESSSCEEE
T ss_pred CCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhh--cCCCcEEEEEEcCCCCEEEEE------------cCCCeEEE
Confidence 86 899999999999999998631 1223344 578999999999987666555 56999999
Q ss_pred CCCC
Q 008356 206 PDPL 209 (568)
Q Consensus 206 WDlr 209 (568)
|++.
T Consensus 289 w~~~ 292 (316)
T 3bg1_A 289 WKES 292 (316)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 9975
No 64
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.92 E-value=7.1e-24 Score=214.83 Aligned_cols=193 Identities=14% Similarity=0.174 Sum_probs=162.6
Q ss_pred ccCC----CCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 008356 2 YNCK----DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (568)
Q Consensus 2 fSpd----G~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafsp-dg~~lLaTgs~DGtV~VWDl~t~~~~v~~ 76 (568)
|+|+ +++|++|+.||.|++||+.+++.+..+.+ |...|.+++|+| ++. +|++++.||.|++||+...+. +..
T Consensus 77 ~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~-~~~~i~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~-~~~ 153 (366)
T 3k26_A 77 WTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVG-HGNAINELKFHPRDPN-LLLSVSKDHALRLWNIQTDTL-VAI 153 (366)
T ss_dssp EEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEES-CCSCEEEEEECSSCTT-EEEEEETTSCEEEEETTTTEE-EEE
T ss_pred eccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecC-CCCcEEEEEECCCCCC-EEEEEeCCCeEEEEEeecCeE-EEE
Confidence 6777 67999999999999999999999999886 778899999999 665 899999999999999988763 445
Q ss_pred e---ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee-----------------------------cCCC
Q 008356 77 L---KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-----------------------------YEAP 124 (568)
Q Consensus 77 l---~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~-----------------------------h~~~ 124 (568)
+ ..|...|.+++|+|++++|++++.|+.|++||+++++.+..+. |...
T Consensus 154 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (366)
T 3k26_A 154 FGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY 233 (366)
T ss_dssp ECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC
T ss_pred ecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcce
Confidence 5 6899999999999999999999999999999999876543331 8889
Q ss_pred eEEEEEecCCCEEEEEEcCCeEEEEECCCCCC-------------ceEEEeecCCCCCeeEEEEccC--CCeEEEeccCC
Q 008356 125 FSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ-------------PLTVLRACSSSEAVSSLCWQRA--KPVFIDETTCK 189 (568)
Q Consensus 125 ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~-------------~v~~l~~~~h~~~VtsLafspd--g~~Las~s~ss 189 (568)
|.+++|+ +++|++++.|+.|++||++.... .+..+. .|...|++++|+|+ +++
T Consensus 234 v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~~~~-------- 301 (366)
T 3k26_A 234 VDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFD--YSQCDIWYMRFSMDFWQKM-------- 301 (366)
T ss_dssp CCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEE--CSSCCSSCCCCEECTTSSE--------
T ss_pred EEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheecccc--ccCCcEEEEEEcCCCCCcE--------
Confidence 9999999 77999999999999999987643 123333 78889999999996 544
Q ss_pred CCeEEEEecCCCcEEcCCCCCCCc
Q 008356 190 AETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 190 d~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
|++++.|+.|++||+.....
T Consensus 302 ----l~~~~~dg~i~vwd~~~~~~ 321 (366)
T 3k26_A 302 ----LALGNQVGKLYVWDLEVEDP 321 (366)
T ss_dssp ----EEEECTTSCEEEEECCSSSG
T ss_pred ----EEEEecCCcEEEEECCCCCC
Confidence 45556799999999977543
No 65
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.91 E-value=1.2e-22 Score=214.68 Aligned_cols=197 Identities=13% Similarity=0.210 Sum_probs=159.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeC----------------------------------------CCCCcE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD----------------------------------------PNEQVL 40 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~----------------------------------------~h~~~V 40 (568)
+|+|+|++|++|+.||.|+|||+.+++.+..+.+ .|...+
T Consensus 154 ~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~ 233 (420)
T 4gga_A 154 AWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV 233 (420)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCE
T ss_pred EECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccce
Confidence 4899999999999999999999998876655543 233445
Q ss_pred EEEEEccCCCeEEEEEeCCCeEEEEECCCCCc---eeEEeccCCCCeEEEEEcC-CCCEEEEE--eCCCeEEEEECCCCc
Q 008356 41 RVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP---KVSWLKQHSAPTAGISFSS-DDKIIASV--GLDKKLYTYDPGSRR 114 (568)
Q Consensus 41 s~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~---~v~~l~~H~~~VtslafsP-dg~~LaSg--s~DGtV~IWDlrt~~ 114 (568)
..+.|.+++. ++++++.|+.|++||....+. .+.....|...|.+++|+| +..+++++ +.|++|++||+++++
T Consensus 234 ~~~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~ 312 (420)
T 4gga_A 234 CGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA 312 (420)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTE
T ss_pred eeeeecCCCC-eeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccc
Confidence 5666777776 677888888888888765432 2456678999999999999 55666654 479999999999999
Q ss_pred eeeEeecCCCeEEEEEecCCCEEEEEE--cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCe
Q 008356 115 PSSCITYEAPFSSLAFIDDDWILTAGT--SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAET 192 (568)
Q Consensus 115 ~v~~~~h~~~ItsLafsPdg~~LasGs--~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~ 192 (568)
++..+.+...+.++.|+++++.+++++ .|+.|+|||+++.. ++..+. +|.+.|++++|+|+|++|+++
T Consensus 313 ~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~-~v~~l~--gH~~~V~~l~~spdg~~l~S~------- 382 (420)
T 4gga_A 313 CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA-KVAELK--GHTSRVLSLTMSPDGATVASA------- 382 (420)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC-EEEEEC--CCSSCEEEEEECTTSSCEEEE-------
T ss_pred cceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc-EEEEEc--CCCCCEEEEEEcCCCCEEEEE-------
Confidence 999998888999999999999988876 78999999999874 455555 899999999999987665554
Q ss_pred EEEEecCCCcEEcCCCCCCCc
Q 008356 193 ALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 193 ~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
+.|++|++||+....+
T Consensus 383 -----s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 383 -----AADETLRLWRCFELDP 398 (420)
T ss_dssp -----ETTTEEEEECCSCSSC
T ss_pred -----ecCCeEEEEECCCCCc
Confidence 6699999999976554
No 66
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.91 E-value=1.3e-22 Score=241.38 Aligned_cols=151 Identities=18% Similarity=0.319 Sum_probs=139.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|+|++|++|+.||.|+|||+.+++.+..+.+ |...|.+++|+|+++ +|++++.||.|+|||+.+++ .+..+.+|
T Consensus 622 ~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~-h~~~v~~~~~s~~~~-~l~s~~~d~~v~vwd~~~~~-~~~~~~~~ 698 (1249)
T 3sfz_A 622 CFSQDGQRIASCGADKTLQVFKAETGEKLLDIKA-HEDEVLCCAFSSDDS-YIATCSADKKVKIWDSATGK-LVHTYDEH 698 (1249)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEECC-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCC-EEEEEECC
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCCEEEEecc-CCCCEEEEEEecCCC-EEEEEeCCCeEEEEECCCCc-eEEEEcCC
Confidence 4899999999999999999999999999999986 778899999999998 89999999999999999887 47778899
Q ss_pred CCCeEEEEEcC--CCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCC
Q 008356 81 SAPTAGISFSS--DDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (568)
Q Consensus 81 ~~~VtslafsP--dg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~ 154 (568)
...|.+++|+| ++.++++++.|+.|++||+++++++..+ .|...|.+++|+|++++|++++.||.|++||++..
T Consensus 699 ~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~ 775 (1249)
T 3sfz_A 699 SEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSA 775 (1249)
T ss_dssp SSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGT
T ss_pred CCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCC
Confidence 99999999999 6678999999999999999999988776 68999999999999999999999999999998754
No 67
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.91 E-value=5.8e-23 Score=212.01 Aligned_cols=192 Identities=21% Similarity=0.301 Sum_probs=156.1
Q ss_pred CccCCCC-EEEEEECCCcEEEEEC----CCCc------eeEEeeC----C-----CCCcEEEEEEccCCCeEEEEEeCCC
Q 008356 1 MYNCKDE-HLASISLSGDLILHNL----ASGA------KAAELKD----P-----NEQVLRVLDYSRNSRHLLVTAGDDG 60 (568)
Q Consensus 1 afSpdG~-~LasGs~DG~V~VWDl----~tg~------~v~~l~~----~-----h~~~Vs~Lafspdg~~lLaTgs~DG 60 (568)
+|+|+++ +|++|+.||.|++||+ .+++ ....+.. + |...|.+++|+|+++ +|++++.||
T Consensus 52 ~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg 130 (425)
T 1r5m_A 52 TWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN-SIVTGVENG 130 (425)
T ss_dssp EECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS-EEEEEETTS
T ss_pred EECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC-EEEEEeCCC
Confidence 4899999 9999999999999999 8887 4444442 1 566899999999997 899999999
Q ss_pred eEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee-cCCC---------------
Q 008356 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAP--------------- 124 (568)
Q Consensus 61 tV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~-h~~~--------------- 124 (568)
.|++||.... .+..+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+. +...
T Consensus 131 ~i~i~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (425)
T 1r5m_A 131 ELRLWNKTGA--LLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSL 208 (425)
T ss_dssp CEEEEETTSC--EEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCC
T ss_pred eEEEEeCCCC--eeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcce
Confidence 9999994433 477788999999999999999999999999999999999998887774 3333
Q ss_pred eEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEE
Q 008356 125 FSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSIL 204 (568)
Q Consensus 125 ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~ 204 (568)
+.+++|++++ .+++++.||.|++||++... +...+. .|...|.+++|+|++++|++ ++.|+.|+
T Consensus 209 ~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~-~~~~~~--~~~~~i~~~~~~~~~~~l~~------------~~~d~~i~ 272 (425)
T 1r5m_A 209 GVDVEWVDDD-KFVIPGPKGAIFVYQITEKT-PTGKLI--GHHGPISVLEFNDTNKLLLS------------ASDDGTLR 272 (425)
T ss_dssp BSCCEEEETT-EEEEECGGGCEEEEETTCSS-CSEEEC--CCSSCEEEEEEETTTTEEEE------------EETTSCEE
T ss_pred eeEEEEcCCC-EEEEEcCCCeEEEEEcCCCc-eeeeec--cCCCceEEEEECCCCCEEEE------------EcCCCEEE
Confidence 8999999975 68899999999999999874 445554 78999999999997655544 45699999
Q ss_pred cCCCCCC
Q 008356 205 MPDPLPS 211 (568)
Q Consensus 205 VWDlr~~ 211 (568)
+||++..
T Consensus 273 i~d~~~~ 279 (425)
T 1r5m_A 273 IWHGGNG 279 (425)
T ss_dssp EECSSSB
T ss_pred EEECCCC
Confidence 9998764
No 68
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.91 E-value=3e-23 Score=209.90 Aligned_cols=178 Identities=19% Similarity=0.294 Sum_probs=149.0
Q ss_pred CccCC---CCEEEEEECCCcEEEEECCC-Ccee-EEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE
Q 008356 1 MYNCK---DEHLASISLSGDLILHNLAS-GAKA-AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (568)
Q Consensus 1 afSpd---G~~LasGs~DG~V~VWDl~t-g~~v-~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~ 75 (568)
+|+|+ |++|++|+.||.|+|||+.+ ++.+ ..+.+ |...|.+++|+|+++ +|++++.||.|++||+.+.. ..
T Consensus 46 ~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~-~l~s~~~dg~v~iwd~~~~~--~~ 121 (368)
T 3mmy_A 46 SFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQM-HTGPVLDVCWSDDGS-KVFTASCDKTAKMWDLSSNQ--AI 121 (368)
T ss_dssp EECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEE-CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTTE--EE
T ss_pred EEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecc-ccCCEEEEEECcCCC-EEEEEcCCCcEEEEEcCCCC--ce
Confidence 47888 69999999999999999987 5555 55554 788899999999998 89999999999999998876 44
Q ss_pred EeccCCCCeEEEEE--cCCCCEEEEEeCCCeEEEEECCCCceeeEee---------------------------------
Q 008356 76 WLKQHSAPTAGISF--SSDDKIIASVGLDKKLYTYDPGSRRPSSCIT--------------------------------- 120 (568)
Q Consensus 76 ~l~~H~~~Vtslaf--sPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~--------------------------------- 120 (568)
.+..|...|++++| ++++++|++++.|+.|++||+++++++..+.
T Consensus 122 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 201 (368)
T 3mmy_A 122 QIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQP 201 (368)
T ss_dssp EEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSC
T ss_pred eeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEecccc
Confidence 46789999999999 8899999999999999999998764321110
Q ss_pred ----------------------------------------------------------cCC------------CeEEEEE
Q 008356 121 ----------------------------------------------------------YEA------------PFSSLAF 130 (568)
Q Consensus 121 ----------------------------------------------------------h~~------------~ItsLaf 130 (568)
|.. .|.+++|
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 281 (368)
T 3mmy_A 202 SEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAF 281 (368)
T ss_dssp EEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEE
T ss_pred chhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEE
Confidence 111 5999999
Q ss_pred ecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 008356 131 IDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 131 sPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~ 185 (568)
+|++++|++++.||.|+|||+++.. .+..+. .|...|++++|+|++++|+++
T Consensus 282 sp~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~--~~~~~v~~~~~s~~g~~l~~~ 333 (368)
T 3mmy_A 282 HPVHGTLATVGSDGRFSFWDKDART-KLKTSE--QLDQPISACCFNHNGNIFAYA 333 (368)
T ss_dssp CTTTCCEEEEETTSCEEEEETTTTE-EEEECC--CCSSCEEEEEECTTSSCEEEE
T ss_pred ecCCCEEEEEccCCeEEEEECCCCc-EEEEec--CCCCCceEEEECCCCCeEEEE
Confidence 9999999999999999999999863 344444 789999999999988887776
No 69
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.91 E-value=5.3e-23 Score=209.71 Aligned_cols=193 Identities=8% Similarity=0.027 Sum_probs=162.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEee-CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc---eeEE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELK-DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP---KVSW 76 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~-~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~---~v~~ 76 (568)
+|+|++++|++++.||.|++||+.+++....+. ..|...|.+++|+++++ +|++++.|+.|++||++.... ....
T Consensus 59 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~ 137 (372)
T 1k8k_C 59 DWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHI 137 (372)
T ss_dssp EEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEE
T ss_pred EEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeee
Confidence 478999999999999999999998887554443 33678899999999997 899999999999999987653 2334
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC------------------CCceeeEe-ecCCCeEEEEEecCCCEE
Q 008356 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPG------------------SRRPSSCI-TYEAPFSSLAFIDDDWIL 137 (568)
Q Consensus 77 l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlr------------------t~~~v~~~-~h~~~ItsLafsPdg~~L 137 (568)
...|...|.+++|+|++++|++++.|+.|++||++ .++.+..+ .|...|.+++|+|++++|
T Consensus 138 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 217 (372)
T 1k8k_C 138 KKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRV 217 (372)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEE
T ss_pred ecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEE
Confidence 46789999999999999999999999999999964 56666666 688899999999999999
Q ss_pred EEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 138 TAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 138 asGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
++++.|+.|++||+++.. ++..+. .|...|.+++|+|+++++ +++ .|+.|++||++.
T Consensus 218 ~~~~~d~~i~i~d~~~~~-~~~~~~--~~~~~v~~~~~~~~~~~l------------~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 218 AWVSHDSTVCLADADKKM-AVATLA--SETLPLLAVTFITESSLV------------AAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEETTTEEEEEEGGGTT-EEEEEE--CSSCCEEEEEEEETTEEE------------EEE-TTSSCEEEEEET
T ss_pred EEEeCCCEEEEEECCCCc-eeEEEc--cCCCCeEEEEEecCCCEE------------EEE-eCCeEEEEEccC
Confidence 999999999999999874 455555 788899999999975444 333 589999999876
No 70
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.91 E-value=5.5e-23 Score=215.04 Aligned_cols=198 Identities=12% Similarity=0.164 Sum_probs=157.7
Q ss_pred ccCCCCEE-EEEECCCcEEEEECCCCc----eeEEeeCCCCCcEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCC----
Q 008356 2 YNCKDEHL-ASISLSGDLILHNLASGA----KAAELKDPNEQVLRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRS---- 71 (568)
Q Consensus 2 fSpdG~~L-asGs~DG~V~VWDl~tg~----~v~~l~~~h~~~Vs~Lafsp-dg~~lLaTgs~DGtV~VWDl~t~~---- 71 (568)
++|+...+ ++++.||.|+||++.... .+..+.+ |...|.+++|+| +++ +|++|+.||.|+|||+....
T Consensus 42 ~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~-h~~~V~~~~~~p~~~~-~l~s~s~dg~v~vw~~~~~~~~~~ 119 (402)
T 2aq5_A 42 VNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCG-HTAPVLDIAWCPHNDN-VIASGSEDCTVMVWEIPDGGLVLP 119 (402)
T ss_dssp ECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCC-CSSCEEEEEECTTCTT-EEEEEETTSEEEEEECCTTCCSSC
T ss_pred ECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEec-CCCCEEEEEeCCCCCC-EEEEEeCCCeEEEEEccCCCCccc
Confidence 34444333 347889999999986542 2334444 788999999999 665 89999999999999998763
Q ss_pred --ceeEEeccCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEECCCCceeeEe---ecCCCeEEEEEecCCCEEEEEEcCCe
Q 008356 72 --PKVSWLKQHSAPTAGISFSSDD-KIIASVGLDKKLYTYDPGSRRPSSCI---TYEAPFSSLAFIDDDWILTAGTSNGR 145 (568)
Q Consensus 72 --~~v~~l~~H~~~VtslafsPdg-~~LaSgs~DGtV~IWDlrt~~~v~~~---~h~~~ItsLafsPdg~~LasGs~DG~ 145 (568)
..+..+.+|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+ .|...|.+++|+|++++|++++.||.
T Consensus 120 ~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~ 199 (402)
T 2aq5_A 120 LREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKR 199 (402)
T ss_dssp BCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSE
T ss_pred cCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCc
Confidence 2366788999999999999987 79999999999999999999988777 38889999999999999999999999
Q ss_pred EEEEECCCCCCceEEEeecCCCCC-eeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 146 VVFYDIRGKPQPLTVLRACSSSEA-VSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 146 V~VWDlrt~~~~v~~l~~~~h~~~-VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
|++||+++.. .+..+. ..|.+. +.++.|+|++++++++.. .+.|+.|++||++...
T Consensus 200 i~iwd~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~l~~g~~---------~~~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 200 VRVIEPRKGT-VVAEKD-RPHEGTRPVHAVFVSEGKILTTGFS---------RMSERQVALWDTKHLE 256 (402)
T ss_dssp EEEEETTTTE-EEEEEE-CSSCSSSCCEEEECSTTEEEEEEEC---------TTCCEEEEEEETTBCS
T ss_pred EEEEeCCCCc-eeeeec-cCCCCCcceEEEEcCCCcEEEEecc---------CCCCceEEEEcCcccc
Confidence 9999999874 333331 256665 899999997655444310 0469999999997654
No 71
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.4e-23 Score=231.66 Aligned_cols=187 Identities=12% Similarity=0.214 Sum_probs=155.0
Q ss_pred CCEEEEEECCCcEEEEECCCCce-----------eEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee
Q 008356 6 DEHLASISLSGDLILHNLASGAK-----------AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (568)
Q Consensus 6 G~~LasGs~DG~V~VWDl~tg~~-----------v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v 74 (568)
+++||+++.||+|+|||+.+++. ...+.+ |...|.+++|++++ +|++|+.||+|++||+.+.....
T Consensus 225 ~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~-h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~~~~~~ 301 (524)
T 2j04_B 225 VGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSL-ADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTDPEVPS 301 (524)
T ss_dssp SCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECC-TTTCEEEEEESSSS--EEEEEETTSEEEEEETTBCSSCS
T ss_pred CceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEc-CCCCEEEEEecCCC--eEEEEeCCCEEEEEECCCCCCce
Confidence 68999999999999999976642 234554 67889999999853 79999999999999998765445
Q ss_pred EEeccCCCCeEEE--EEcCCC-CEEEEEeCCCeEEEEECCCCceeeEe-ecC--CCeEEEEEecCCCEEEEEEcCCeEEE
Q 008356 75 SWLKQHSAPTAGI--SFSSDD-KIIASVGLDKKLYTYDPGSRRPSSCI-TYE--APFSSLAFIDDDWILTAGTSNGRVVF 148 (568)
Q Consensus 75 ~~l~~H~~~Vtsl--afsPdg-~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~--~~ItsLafsPdg~~LasGs~DG~V~V 148 (568)
..+..|...|++| .|++++ ++|++++.|++|++||+++++++..+ .|. ..|.+++|+|+++.|++++.|+.|++
T Consensus 302 ~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~l 381 (524)
T 2j04_B 302 FYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRA 381 (524)
T ss_dssp EEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEE
T ss_pred EEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEE
Confidence 6688999999999 567787 89999999999999999988776555 343 35889999999999999999999999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 149 WDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
||++.... ...+. +|.+.|++|+|+|++++|+++ +.|++|++||+..
T Consensus 382 wd~~~~~~-~~~l~--gH~~~V~sva~Sp~g~~l~Sg------------s~Dgtv~lwd~~~ 428 (524)
T 2j04_B 382 VPSRAAFA-VHPLV--SRETTITAIGVSRLHPMVLAG------------SADGSLIITNAAR 428 (524)
T ss_dssp EETTCTTC-CEEEE--ECSSCEEEEECCSSCCBCEEE------------ETTTEEECCBSCS
T ss_pred EECccccc-ceeee--cCCCceEEEEeCCCCCeEEEE------------ECCCEEEEEechH
Confidence 99998754 34444 699999999999987665554 6699999999743
No 72
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.91 E-value=7.9e-23 Score=231.59 Aligned_cols=195 Identities=13% Similarity=0.149 Sum_probs=168.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++|++++.||.|+|||+.+++.+..+.. |...|.+++|+|+++ +|++++.||.|++||+.+++ .+..+..|
T Consensus 20 ~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~~~-~~~~~~~~ 96 (814)
T 3mkq_A 20 DFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQV-TETPVRAGKFIARKN-WIIVGSDDFRIRVFNYNTGE-KVVDFEAH 96 (814)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEEC-CSSCEEEEEEEGGGT-EEEEEETTSEEEEEETTTCC-EEEEEECC
T ss_pred EECCCCCEEEEEeCCCEEEEEECCCCceEEEEec-CCCcEEEEEEeCCCC-EEEEEeCCCeEEEEECCCCc-EEEEEecC
Confidence 4899999999999999999999999999999986 778899999999998 89999999999999998887 46778899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC-ceeeEe-ecCCCeEEEEEec-CCCEEEEEEcCCeEEEEECCCCCCc
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSR-RPSSCI-TYEAPFSSLAFID-DDWILTAGTSNGRVVFYDIRGKPQP 157 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~-~~v~~~-~h~~~ItsLafsP-dg~~LasGs~DG~V~VWDlrt~~~~ 157 (568)
...|++++|+|++.+|++++.|+.|++||++++ .....+ .|...|.+++|+| ++.+|++++.||.|++||++.....
T Consensus 97 ~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~ 176 (814)
T 3mkq_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (814)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCS
T ss_pred CCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcce
Confidence 999999999999999999999999999999987 444444 5889999999999 8899999999999999999877544
Q ss_pred eEEEeecCCCCCeeEEEEcc--CCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 158 LTVLRACSSSEAVSSLCWQR--AKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 158 v~~l~~~~h~~~VtsLafsp--dg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
..... .|...|.+++|+| +++ ++++++.|+.|++||++...
T Consensus 177 ~~~~~--~~~~~v~~~~~~~~~~~~------------~l~~~~~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 177 FTLTT--GQERGVNYVDYYPLPDKP------------YMITASDDLTIKIWDYQTKS 219 (814)
T ss_dssp EEEEC--CCTTCCCEEEECCSTTCC------------EEEEECTTSEEEEEETTTTE
T ss_pred eEEec--CCCCCEEEEEEEECCCCC------------EEEEEeCCCEEEEEECCCCc
Confidence 33332 4558899999998 544 45555679999999986543
No 73
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.91 E-value=9.7e-23 Score=205.13 Aligned_cols=194 Identities=16% Similarity=0.240 Sum_probs=161.4
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCC-eEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSR-HLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~-~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+++++++|++++.|+.+++||+............|...+.+++|++++. .++++++.|+.|++||+...+ .+..+.+|
T Consensus 136 ~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~-~~~~~~~h 214 (340)
T 4aow_A 136 FSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK-LKTNHIGH 214 (340)
T ss_dssp ECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE-EEEEECCC
T ss_pred EeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCc-eeeEecCC
Confidence 5788999999999999999998776655554455788899999998753 367899999999999998876 46778899
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~ 160 (568)
...|++++|+|++++|++++.|+.|++||+++.+++..+.+...|.+++|+|++.++ +++.|+.|+|||+++.. .+..
T Consensus 215 ~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~-~~~~ 292 (340)
T 4aow_A 215 TGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL-CAATGPSIKIWDLEGKI-IVDE 292 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEE-EEEETTEEEEEETTTTE-EEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeecCCCCcee-eccCCCEEEEEECCCCe-EEEe
Confidence 999999999999999999999999999999999999999888999999999987655 56679999999998753 2222
Q ss_pred E-------eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 161 L-------RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 161 l-------~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
+ ....|...|++++|+|++++|++ ++.|+.|++||+..
T Consensus 293 ~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s------------gs~Dg~v~iW~~~t 337 (340)
T 4aow_A 293 LKQEVISTSSKAEPPQCTSLAWSADGQTLFA------------GYTDNLVRVWQVTI 337 (340)
T ss_dssp ECCC-------CCCCCEEEEEECTTSSEEEE------------EETTSCEEEEEEEC
T ss_pred ccccceeeeccCCCCCEEEEEECCCCCEEEE------------EeCCCEEEEEeCCC
Confidence 2 12368899999999997666554 46699999999865
No 74
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.91 E-value=1.8e-22 Score=201.32 Aligned_cols=196 Identities=13% Similarity=0.195 Sum_probs=161.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeC----------------------------------------CCCCcE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD----------------------------------------PNEQVL 40 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~----------------------------------------~h~~~V 40 (568)
+|+|++++|++|+.||.|+|||+++++.+..+.+ .|...+
T Consensus 74 ~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (318)
T 4ggc_A 74 AWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEV 153 (318)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCE
T ss_pred EECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCce
Confidence 4899999999999999999999998876655433 244556
Q ss_pred EEEEEccCCCeEEEEEeCCCeEEEEECCCCCc---eeEEeccCCCCeEEEEEcCCCC-EE--EEEeCCCeEEEEECCCCc
Q 008356 41 RVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP---KVSWLKQHSAPTAGISFSSDDK-II--ASVGLDKKLYTYDPGSRR 114 (568)
Q Consensus 41 s~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~---~v~~l~~H~~~VtslafsPdg~-~L--aSgs~DGtV~IWDlrt~~ 114 (568)
..+.|.++++ +|++++.|+.|++||+.+++. .......|...|.++.+++++. .+ ++++.++.|++||.+...
T Consensus 154 ~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~ 232 (318)
T 4ggc_A 154 CGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA 232 (318)
T ss_dssp EEEEECTTSS-EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC
T ss_pred EEEEEcCCCC-EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc
Confidence 7788888887 899999999999999976542 2455677888999999999544 33 356688999999999999
Q ss_pred eeeEeecCCCeEEEEEecCCCEEEEEE--cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCe
Q 008356 115 PSSCITYEAPFSSLAFIDDDWILTAGT--SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAET 192 (568)
Q Consensus 115 ~v~~~~h~~~ItsLafsPdg~~LasGs--~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~ 192 (568)
......+...+..+.|.+++..+++++ .|+.|+|||+++.+ ++..+. +|.+.|++++|+|++++|+++
T Consensus 233 ~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~-~~~~l~--gH~~~V~~l~~spdg~~l~S~------- 302 (318)
T 4ggc_A 233 CLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA-KVAELK--GHTSRVLSLTMSPDGATVASA------- 302 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC-EEEEEC--CCSSCEEEEEECTTSSCEEEE-------
T ss_pred ccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc-EEEEEc--CCCCCEEEEEEcCCCCEEEEE-------
Confidence 888888999999999999999888765 79999999999874 555565 899999999999987665554
Q ss_pred EEEEecCCCcEEcCCCCCCC
Q 008356 193 ALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 193 ~Lls~s~Dg~V~VWDlr~~~ 212 (568)
+.|++|++||+....
T Consensus 303 -----s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 303 -----AADETLRLWRCFELD 317 (318)
T ss_dssp -----ETTTEEEEECCSCCC
T ss_pred -----ecCCeEEEEECCCCC
Confidence 669999999997643
No 75
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.91 E-value=9.9e-23 Score=216.19 Aligned_cols=190 Identities=13% Similarity=0.200 Sum_probs=159.6
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~ 81 (568)
+.+++++|++|+.||.|++||+.+++.+..+.+ |...|.+++|++++ +|++|+.||+|++||+.+++ .+..+.+|.
T Consensus 128 ~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~-h~~~V~~l~~~~~~--~l~s~s~dg~i~vwd~~~~~-~~~~~~~h~ 203 (464)
T 3v7d_B 128 LQFEDNYVITGADDKMIRVYDSINKKFLLQLSG-HDGGVWALKYAHGG--ILVSGSTDRTVRVWDIKKGC-CTHVFEGHN 203 (464)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEECSTT--EEEEEETTSCEEEEETTTTE-EEEEECCCS
T ss_pred EEECCCEEEEEcCCCcEEEEECCCCcEEEEEeC-CCcCEEEEEEcCCC--EEEEEeCCCCEEEEECCCCc-EEEEECCCC
Confidence 345788999999999999999999999999986 77889999999876 79999999999999998876 467788999
Q ss_pred CCeEEEEEcC--CCCEEEEEeCCCeEEEEECCCCceee-----------------------Ee-ecCCCeEEEEEecCCC
Q 008356 82 APTAGISFSS--DDKIIASVGLDKKLYTYDPGSRRPSS-----------------------CI-TYEAPFSSLAFIDDDW 135 (568)
Q Consensus 82 ~~VtslafsP--dg~~LaSgs~DGtV~IWDlrt~~~v~-----------------------~~-~h~~~ItsLafsPdg~ 135 (568)
..|.+++|++ ++++|++++.|+.|++||++++.... .+ .|...+.++ +++++
T Consensus 204 ~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~ 281 (464)
T 3v7d_B 204 STVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGN 281 (464)
T ss_dssp SCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETT
T ss_pred CccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCC
Confidence 9999999994 77999999999999999998865331 22 466667666 56789
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 136 ~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
+|++|+.||.|++||+++.. ++..+. +|...|.+++|+|++++++ +++.|+.|++||++...
T Consensus 282 ~l~~~~~d~~i~vwd~~~~~-~~~~~~--~~~~~v~~~~~~~~~~~l~------------sg~~dg~i~vwd~~~~~ 343 (464)
T 3v7d_B 282 IVVSGSYDNTLIVWDVAQMK-CLYILS--GHTDRIYSTIYDHERKRCI------------SASMDTTIRIWDLENGE 343 (464)
T ss_dssp EEEEEETTSCEEEEETTTTE-EEEEEC--CCSSCEEEEEEETTTTEEE------------EEETTSCEEEEETTTTE
T ss_pred EEEEEeCCCeEEEEECCCCc-EEEEec--CCCCCEEEEEEcCCCCEEE------------EEeCCCcEEEEECCCCc
Confidence 99999999999999999763 344444 7999999999999766554 44669999999987644
No 76
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.91 E-value=3.6e-23 Score=209.28 Aligned_cols=199 Identities=14% Similarity=0.205 Sum_probs=164.6
Q ss_pred CccCC---CCEEEEEECCCcEEEEECCCCc-eeEEeeCCCCCcEEEEEE------ccCCCeEEEEEeCCCeEEEEECCCC
Q 008356 1 MYNCK---DEHLASISLSGDLILHNLASGA-KAAELKDPNEQVLRVLDY------SRNSRHLLVTAGDDGTLHLWDTTGR 70 (568)
Q Consensus 1 afSpd---G~~LasGs~DG~V~VWDl~tg~-~v~~l~~~h~~~Vs~Laf------spdg~~lLaTgs~DGtV~VWDl~t~ 70 (568)
+|+|+ +++|++|+.||.|++||+.+++ .+..+.+ |...|.+++| +++++ +|++++.||.|++||+...
T Consensus 72 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~ 149 (357)
T 3i2n_A 72 TFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKG-HKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQK 149 (357)
T ss_dssp ECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECC-CSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSC
T ss_pred EEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEe-cccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCC
Confidence 37787 7999999999999999999888 7777876 7788999965 57777 8999999999999999887
Q ss_pred CceeEEeccCCC----CeEEEE----EcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEec---CCCEEEE
Q 008356 71 SPKVSWLKQHSA----PTAGIS----FSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFID---DDWILTA 139 (568)
Q Consensus 71 ~~~v~~l~~H~~----~Vtsla----fsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsP---dg~~Las 139 (568)
...+..+..|.. .|.+++ |++++++|++++.|+.|++||+++++......+...|.+++|+| ++.+|++
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ 229 (357)
T 3i2n_A 150 DDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVA 229 (357)
T ss_dssp SSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEE
T ss_pred CCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEE
Confidence 644666665554 899998 67899999999999999999999999887788999999999999 9999999
Q ss_pred EEcCCeEEEEECCCCCCceEE--EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 140 GTSNGRVVFYDIRGKPQPLTV--LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 140 Gs~DG~V~VWDlrt~~~~v~~--l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
++.||.|++||++........ ....+|...|++++|+|+++ .++++++.|+.|++||++...
T Consensus 230 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----------~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 230 TSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR-----------ELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE-----------EEEEEEETTSEEEEEEEECCS
T ss_pred ECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC-----------cEEEEEeCCCcEEEeecCCCc
Confidence 999999999999875332221 12237999999999999644 245666779999999987654
No 77
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.91 E-value=7e-23 Score=211.89 Aligned_cols=205 Identities=15% Similarity=0.177 Sum_probs=168.5
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEeeCCC--CCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 008356 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELKDPN--EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (568)
Q Consensus 1 afSp-dG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h--~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l 77 (568)
+|+| ++++|++++.||.|++||+.. +.+..+..++ ...|.+++|+|+++ +|++|+.|+.|++||++.. .+..+
T Consensus 125 ~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~--~~~~~ 200 (383)
T 3ei3_B 125 KFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLDGH--EIFKE 200 (383)
T ss_dssp EEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETTSC--EEEEE
T ss_pred EeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECCCC--EEEEe
Confidence 3788 679999999999999999975 5566665533 47799999999998 8999999999999999543 47778
Q ss_pred ccCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEECCC----CceeeEeecCCCeEEEEEec-CCCEEEEEEcCCeEEEEEC
Q 008356 78 KQHSAPTAGISFSSDDK-IIASVGLDKKLYTYDPGS----RRPSSCITYEAPFSSLAFID-DDWILTAGTSNGRVVFYDI 151 (568)
Q Consensus 78 ~~H~~~VtslafsPdg~-~LaSgs~DGtV~IWDlrt----~~~v~~~~h~~~ItsLafsP-dg~~LasGs~DG~V~VWDl 151 (568)
..|...|.+++|+|+++ +|++++.|+.|++||+++ +.++..+.|...|.+++|+| ++++|++++.|+.|++||+
T Consensus 201 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~ 280 (383)
T 3ei3_B 201 KLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSS 280 (383)
T ss_dssp ECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEET
T ss_pred ccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEEC
Confidence 89999999999999988 999999999999999998 66777778999999999999 9999999999999999999
Q ss_pred CCCCCceEEEe----ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 152 RGKPQPLTVLR----ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 152 rt~~~~v~~l~----~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
++......... ...|...+. +.|+|++..++.+.. .++.+ +++.|+.|++||++....
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~s-~dg~~--s~s~d~~i~iwd~~~~~~ 342 (383)
T 3ei3_B 281 YDWSKPDQIIIHPHRQFQHLTPIK-ATWHPMYDLIVAGRY-PDDQL--LLNDKRTIDIYDANSGGL 342 (383)
T ss_dssp TBTTSCSEEEECCBCCCTTSCCCC-CEECSSSSEEEEECB-CCTTT--CTTCCCCEEEEETTTCCE
T ss_pred CCCccccccccccccccccccceE-EeccCCCCceEEEec-CCccc--ccCCCCeEEEEecCCCce
Confidence 98755433331 113455666 589998888776633 33333 777899999999976554
No 78
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.91 E-value=1.1e-23 Score=213.42 Aligned_cols=194 Identities=18% Similarity=0.242 Sum_probs=159.1
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEee--CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce----
Q 008356 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELK--DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK---- 73 (568)
Q Consensus 1 afSp-dG~~LasGs~DG~V~VWDl~tg~~v~~l~--~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~---- 73 (568)
+|+| ++++|++++.||.|++||+.+++.+..+. ..|...|.+++|+|+++ +|++++.||.|++||++..+..
T Consensus 122 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~ 200 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIK 200 (366)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHH
T ss_pred EECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccc
Confidence 4788 89999999999999999999999888873 24778899999999997 8999999999999999765421
Q ss_pred -----------------------eEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCce--------------e
Q 008356 74 -----------------------VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP--------------S 116 (568)
Q Consensus 74 -----------------------v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~--------------v 116 (568)
......|...|.+++|+ +++|++++.|+.|++||+++++. +
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~ 278 (366)
T 3k26_A 201 ESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTIL 278 (366)
T ss_dssp HHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEE
T ss_pred eeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchhee
Confidence 12333499999999999 78999999999999999987643 3
Q ss_pred eEe-ecCCCeEEEEEecC--CCEEEEEEcCCeEEEEECCCCCCc---eEEEeecCCCCCeeEEEEccCCCeEEEeccCCC
Q 008356 117 SCI-TYEAPFSSLAFIDD--DWILTAGTSNGRVVFYDIRGKPQP---LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKA 190 (568)
Q Consensus 117 ~~~-~h~~~ItsLafsPd--g~~LasGs~DG~V~VWDlrt~~~~---v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd 190 (568)
..+ .|...|.+++|+|+ +++|++|+.||.|++||++..... ...+..+.|...|++++|+|++++|++
T Consensus 279 ~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s------ 352 (366)
T 3k26_A 279 GRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIA------ 352 (366)
T ss_dssp EEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEE------
T ss_pred ccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEE------
Confidence 333 57888999999999 999999999999999999986432 224443334799999999997665544
Q ss_pred CeEEEEecCCCcEEcCCCC
Q 008356 191 ETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 191 ~~~Lls~s~Dg~V~VWDlr 209 (568)
++.|+.|++||+.
T Consensus 353 ------~~~dg~i~iwd~~ 365 (366)
T 3k26_A 353 ------VCDDASIWRWDRL 365 (366)
T ss_dssp ------EETTSEEEEEEC-
T ss_pred ------EeCCCEEEEEEec
Confidence 4669999999974
No 79
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.91 E-value=3.6e-23 Score=219.85 Aligned_cols=197 Identities=20% Similarity=0.324 Sum_probs=166.4
Q ss_pred CccCC-CCEEEEEECCCcEEEEECCC----------CceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Q 008356 1 MYNCK-DEHLASISLSGDLILHNLAS----------GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG 69 (568)
Q Consensus 1 afSpd-G~~LasGs~DG~V~VWDl~t----------g~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t 69 (568)
+|+|+ +++|++++.||.|+|||+.+ .+.+..+.+ |...|.+++|++++..+|++|+.||.|++||+..
T Consensus 135 ~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 213 (430)
T 2xyi_A 135 RYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRG-HQKEGYGLSWNPNLNGYLLSASDDHTICLWDINA 213 (430)
T ss_dssp EEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEEC-CSSCCCCEEECTTSTTEEEEECTTSCEEEEETTS
T ss_pred EECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecC-CCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCC
Confidence 37786 67899999999999999976 566777776 6677899999999877899999999999999977
Q ss_pred CCce------eEEeccCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCC---ceeeEe-ecCCCeEEEEEecCCC-EE
Q 008356 70 RSPK------VSWLKQHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSR---RPSSCI-TYEAPFSSLAFIDDDW-IL 137 (568)
Q Consensus 70 ~~~~------v~~l~~H~~~VtslafsP-dg~~LaSgs~DGtV~IWDlrt~---~~v~~~-~h~~~ItsLafsPdg~-~L 137 (568)
.... ...+..|...|.+++|+| ++.+|++++.|+.|++||++++ +.+..+ .|...|++++|+|++. +|
T Consensus 214 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l 293 (430)
T 2xyi_A 214 TPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFIL 293 (430)
T ss_dssp CCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEE
T ss_pred CCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEE
Confidence 3211 345678999999999999 7889999999999999999987 455555 6889999999999886 78
Q ss_pred EEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCC
Q 008356 138 TAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (568)
Q Consensus 138 asGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~ 211 (568)
++|+.||.|++||++....++..+. .|...|.+++|+|+++ .+|++++.|+.|++||++..
T Consensus 294 ~tg~~dg~v~vwd~~~~~~~~~~~~--~h~~~v~~i~~sp~~~-----------~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 294 ATGSADKTVALWDLRNLKLKLHSFE--SHKDEIFQVQWSPHNE-----------TILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp EEEETTSEEEEEETTCTTSCSEEEE--CCSSCEEEEEECSSCT-----------TEEEEEETTSCCEEEEGGGT
T ss_pred EEEeCCCeEEEEeCCCCCCCeEEee--cCCCCEEEEEECCCCC-----------CEEEEEeCCCcEEEEeCCCC
Confidence 8999999999999998666677776 7899999999999754 34555677999999998764
No 80
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.8e-23 Score=214.64 Aligned_cols=191 Identities=9% Similarity=0.018 Sum_probs=155.5
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC---------CCCc
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT---------GRSP 72 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~---------t~~~ 72 (568)
+.+++++|++|+.||.|++||+.+++.+..+. ...|.++.|+|+ +++++.|++|++|+.. ....
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~ 116 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT---TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNKV 116 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE---EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCCE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe---cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCcce
Confidence 34578899999999999999999999887776 245666778876 8999999999999765 3332
Q ss_pred eeEEeccCCCCeEEEEEcC--CCCEEEEEeCCCeEEEEECCCCceeeEe--ecCCCeEEEEEecCCCEEEEEEcCCeEEE
Q 008356 73 KVSWLKQHSAPTAGISFSS--DDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (568)
Q Consensus 73 ~v~~l~~H~~~VtslafsP--dg~~LaSgs~DGtV~IWDlrt~~~v~~~--~h~~~ItsLafsPdg~~LasGs~DG~V~V 148 (568)
.......|...|.+++|+| ++++|++++.|++|++||+++++.+... .+...|.+++|+|++.+|++|+.||.|+|
T Consensus 117 ~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~i 196 (343)
T 3lrv_A 117 LREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDV 196 (343)
T ss_dssp EEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEE
T ss_pred eEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEE
Confidence 2233346778999999999 9999999999999999999999887655 35667999999999999999999999999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 149 WDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
||+++.......+.. .|...|++++|+|++.+|+++ + |+.|++||++....
T Consensus 197 wd~~~~~~~~~~~~~-~h~~~v~~l~fs~~g~~l~s~------------~-~~~v~iwd~~~~~~ 247 (343)
T 3lrv_A 197 YNLSSPDQASSRFPV-DEEAKIKEVKFADNGYWMVVE------------C-DQTVVCFDLRKDVG 247 (343)
T ss_dssp EESSCTTSCCEECCC-CTTSCEEEEEECTTSSEEEEE------------E-SSBEEEEETTSSTT
T ss_pred EECCCCCCCccEEec-cCCCCEEEEEEeCCCCEEEEE------------e-CCeEEEEEcCCCCc
Confidence 999988654345541 389999999999976665544 4 55999999987654
No 81
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.4e-22 Score=209.18 Aligned_cols=192 Identities=13% Similarity=0.262 Sum_probs=163.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++|++++.||.|++|| .+++.+..+.. |...|.+++|+|+++ +|++++.|+.|++||+.+.. .+..+..+
T Consensus 115 ~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~-~~~~~~~~ 190 (425)
T 1r5m_A 115 AWSHDGNSIVTGVENGELRLWN-KTGALLNVLNF-HRAPIVSVKWNKDGT-HIISMDVENVTILWNVISGT-VMQHFELK 190 (425)
T ss_dssp EECTTSSEEEEEETTSCEEEEE-TTSCEEEEECC-CCSCEEEEEECTTSS-EEEEEETTCCEEEEETTTTE-EEEEECCC
T ss_pred EEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccC-CCccEEEEEECCCCC-EEEEEecCCeEEEEECCCCc-EEEEeecc
Confidence 4899999999999999999999 67888888875 778899999999998 89999999999999998776 35566667
Q ss_pred CCC---------------eEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCC
Q 008356 81 SAP---------------TAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNG 144 (568)
Q Consensus 81 ~~~---------------VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG 144 (568)
... +.+++|+++ ..+++++.|+.|++||+++++.+..+ .|...|.+++|+|++++|++++.|+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~ 269 (425)
T 1r5m_A 191 ETGGSSINAENHSGDGSLGVDVEWVDD-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDG 269 (425)
T ss_dssp ---------------CCCBSCCEEEET-TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred ccCccceeeccccCCcceeeEEEEcCC-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCC
Confidence 666 999999987 45889999999999999998887777 6889999999999999999999999
Q ss_pred eEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 145 RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 145 ~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
.|++||++... ....+. .|...|.+++|+|++ ++++++.|+.|++||++....
T Consensus 270 ~i~i~d~~~~~-~~~~~~--~~~~~i~~~~~~~~~-------------~l~~~~~d~~i~i~d~~~~~~ 322 (425)
T 1r5m_A 270 TLRIWHGGNGN-SQNCFY--GHSQSIVSASWVGDD-------------KVISCSMDGSVRLWSLKQNTL 322 (425)
T ss_dssp CEEEECSSSBS-CSEEEC--CCSSCEEEEEEETTT-------------EEEEEETTSEEEEEETTTTEE
T ss_pred EEEEEECCCCc-cceEec--CCCccEEEEEECCCC-------------EEEEEeCCCcEEEEECCCCcE
Confidence 99999999864 344454 688999999999964 455556799999999976543
No 82
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.91 E-value=7.4e-22 Score=208.57 Aligned_cols=197 Identities=14% Similarity=0.199 Sum_probs=159.9
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~-~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
|+++ ++|++|. |++|+|||+.+++.+..+.. .|...|++|+|+|+++ +|++|+.||.|+|||+.+++ .+..+.+|
T Consensus 113 wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~-~lasgs~Dg~v~iWd~~~~~-~~~~~~~h 188 (420)
T 4gga_A 113 WSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQQK-RLRNMTSH 188 (420)
T ss_dssp ECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE-EEEEECCC
T ss_pred ECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCC-EEEEEECCCeEEEEEcCCCc-EEEEEeCC
Confidence 6654 5777765 89999999999998887764 3567899999999998 89999999999999998887 47788999
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCce-eeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP-SSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~-v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v 158 (568)
...|.++.|+ +.+|++++.|+.+++||.+.... +..+ .|...+..+.|.|+++++++++.|+.|++||........
T Consensus 189 ~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~ 266 (420)
T 4gga_A 189 SARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGW 266 (420)
T ss_dssp SSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCS
T ss_pred CCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccc
Confidence 9999998886 68999999999999999987543 3344 689999999999999999999999999999998754321
Q ss_pred E-EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 159 T-VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 159 ~-~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
. ......|...|.+++|+|.+..++. ..+++.|+.|++||++....
T Consensus 267 ~~~~~~~~~~~~V~~~~~~p~~~~~la---------~~~gs~D~~I~iwd~~t~~~ 313 (420)
T 4gga_A 267 VPLQTFTQHQGAVKAVAWCPWQSNVLA---------TGGGTSDRHIRIWNVCSGAC 313 (420)
T ss_dssp CCSEEECCCSSCEEEEEECTTCTTEEE---------EEECTTTCEEEEEETTTTEE
T ss_pred eeeeeecccCCceeeeeeCCCcccEEE---------EEeecCCCEEEEEeCCcccc
Confidence 1 1222378999999999997544322 12346799999999876543
No 83
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.90 E-value=4.8e-23 Score=212.66 Aligned_cols=198 Identities=16% Similarity=0.179 Sum_probs=163.8
Q ss_pred ccCC----C---CEEEEEECCCcEEEEECCCCce-----eEEeeCCC----CCcEEEEEEc----cCCCeE-EEEEeCCC
Q 008356 2 YNCK----D---EHLASISLSGDLILHNLASGAK-----AAELKDPN----EQVLRVLDYS----RNSRHL-LVTAGDDG 60 (568)
Q Consensus 2 fSpd----G---~~LasGs~DG~V~VWDl~tg~~-----v~~l~~~h----~~~Vs~Lafs----pdg~~l-LaTgs~DG 60 (568)
|+|+ + ++|++++.||.|++||+.+++. +..+..+. ...|.+++|+ ++++ + |++++.||
T Consensus 70 ~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~l~~~~~dg 148 (397)
T 1sq9_A 70 VLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS-HRLVATDVKG 148 (397)
T ss_dssp EEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----C-EEEEEEETTS
T ss_pred EecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCc-eEEEEEeCCC
Confidence 6677 8 9999999999999999988876 77777643 5789999999 9988 6 99999999
Q ss_pred eEEEEECCC------CCceeE-----Ee-------ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee--
Q 008356 61 TLHLWDTTG------RSPKVS-----WL-------KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-- 120 (568)
Q Consensus 61 tV~VWDl~t------~~~~v~-----~l-------~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~-- 120 (568)
.|++||+.. ... +. .+ ..|...|.+++|+|++ +|++++.|+.|++||+++++.+..+.
T Consensus 149 ~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 226 (397)
T 1sq9_A 149 TTYIWKFHPFADESNSLT-LNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQ 226 (397)
T ss_dssp CEEEEEEESSSSHHHHTT-TCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECC
T ss_pred cEEEEeCCccccccccce-eeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEecc
Confidence 999999987 442 22 44 5589999999999999 99999999999999999998888774
Q ss_pred --c---CCCeEEEEEecCCCEEEEEEcC---CeEEEEECCCCCCceEEEeecC-------------CCCCeeEEEEccCC
Q 008356 121 --Y---EAPFSSLAFIDDDWILTAGTSN---GRVVFYDIRGKPQPLTVLRACS-------------SSEAVSSLCWQRAK 179 (568)
Q Consensus 121 --h---~~~ItsLafsPdg~~LasGs~D---G~V~VWDlrt~~~~v~~l~~~~-------------h~~~VtsLafspdg 179 (568)
| ...|.+++|+|++++|++++.| +.|++||+++.. ++..+. . |...|.+++|+|++
T Consensus 227 ~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 303 (397)
T 1sq9_A 227 HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE-RIGSLS--VPTHSSQASLGEFAHSSWVMSLSFNDSG 303 (397)
T ss_dssp C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC-EEEEEC--BC--------CCBSBSSCEEEEEECSSS
T ss_pred ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc-ccceec--cCcccccccccccccCCcEEEEEECCCC
Confidence 5 8999999999999999999999 999999999873 444444 4 88999999999976
Q ss_pred CeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCccccc
Q 008356 180 PVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSSV 217 (568)
Q Consensus 180 ~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~~s~ 217 (568)
++|++ ++.|+.|++||++.......+
T Consensus 304 ~~l~~------------~~~dg~i~iwd~~~~~~~~~~ 329 (397)
T 1sq9_A 304 ETLCS------------AGWDGKLRFWDVKTKERITTL 329 (397)
T ss_dssp SEEEE------------EETTSEEEEEETTTTEEEEEE
T ss_pred CEEEE------------EeCCCeEEEEEcCCCceeEEE
Confidence 65544 466999999999876544433
No 84
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.90 E-value=3.4e-22 Score=205.52 Aligned_cols=198 Identities=16% Similarity=0.136 Sum_probs=160.7
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCC--eEEEEEeCCCeEEEEECCCCCceeEEe
Q 008356 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSR--HLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (568)
Q Consensus 1 afSp-dG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~--~lLaTgs~DGtV~VWDl~t~~~~v~~l 77 (568)
+|+| ++++|++++.||.|++||+.+++.+..+. +...+.++.|.+.+. .++++++.|+.|++||+..... +..+
T Consensus 106 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~-~~~~ 182 (408)
T 4a11_B 106 QWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN--FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC-SHIL 182 (408)
T ss_dssp EECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE--CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCC-CEEE
T ss_pred EEccCCCcEEEEEeCCCeEEEeeCCCCccceecc--CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce-eeee
Confidence 3778 77899999999999999999999888877 566788899998543 2899999999999999987764 6678
Q ss_pred ccCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc-eeeE----------------eecCCCeEEEEEecCCCEEEE
Q 008356 78 KQHSAPTAGISFSSDDK-IIASVGLDKKLYTYDPGSRR-PSSC----------------ITYEAPFSSLAFIDDDWILTA 139 (568)
Q Consensus 78 ~~H~~~VtslafsPdg~-~LaSgs~DGtV~IWDlrt~~-~v~~----------------~~h~~~ItsLafsPdg~~Las 139 (568)
..|...|.+++|+|++. +|++++.|+.|++||++++. .+.. ..|...|.+++|+|++++|++
T Consensus 183 ~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 262 (408)
T 4a11_B 183 QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLT 262 (408)
T ss_dssp CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEE
T ss_pred cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEE
Confidence 89999999999999888 58999999999999998765 2222 247788999999999999999
Q ss_pred EEcCCeEEEEECCCCCCce--------------------------------------------EEEeecCCCCCeeEEEE
Q 008356 140 GTSNGRVVFYDIRGKPQPL--------------------------------------------TVLRACSSSEAVSSLCW 175 (568)
Q Consensus 140 Gs~DG~V~VWDlrt~~~~v--------------------------------------------~~l~~~~h~~~VtsLaf 175 (568)
++.||.|++||+++..... ......+|...|++++|
T Consensus 263 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 342 (408)
T 4a11_B 263 VGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVF 342 (408)
T ss_dssp EETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred ecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEE
Confidence 9999999999998643210 11112368899999999
Q ss_pred ccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 176 QRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 176 spdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
+|++++|++ ++.|+.|++||+.....
T Consensus 343 s~~~~~l~s------------~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 343 QSNFQELYS------------GSRDCNILAWVPSLYEP 368 (408)
T ss_dssp ETTTTEEEE------------EETTSCEEEEEECC---
T ss_pred cCCCCEEEE------------ECCCCeEEEEeCCCCCc
Confidence 997665544 46699999999987654
No 85
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.90 E-value=7.2e-22 Score=196.04 Aligned_cols=187 Identities=14% Similarity=0.145 Sum_probs=156.1
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC--ceeEEecc
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS--PKVSWLKQ 79 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~--~~v~~l~~ 79 (568)
| +++++|++++.||.|++||+.+++....+.. |...|.+++|+|+++ +|++++.||.|++|++.... .....+..
T Consensus 26 ~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~ 102 (313)
T 3odt_A 26 A-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYT-GQGFLNSVCYDSEKE-LLLFGGKDTMINGVPLFATSGEDPLYTLIG 102 (313)
T ss_dssp E-EETTEEEEEETTSEEEEEEESSSEEEEEEEE-CSSCEEEEEEETTTT-EEEEEETTSCEEEEETTCCTTSCC-CEECC
T ss_pred e-cCCCEEEEEEcCCcEEEEECCCCEEEEEeec-CCccEEEEEECCCCC-EEEEecCCCeEEEEEeeecCCCCcccchhh
Confidence 5 7899999999999999999988888887776 678899999999998 89999999999999996543 23667789
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEec-CCCEEEEEEcCCeEEEEECCCCCCc
Q 008356 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFID-DDWILTAGTSNGRVVFYDIRGKPQP 157 (568)
Q Consensus 80 H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsP-dg~~LasGs~DG~V~VWDlrt~~~~ 157 (568)
|...|.++.| ++++|++++.|+.|++|| .++.+..+ .|...+.+++|.+ ++++|++++.||.|++||... .
T Consensus 103 ~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~---~ 175 (313)
T 3odt_A 103 HQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK---V 175 (313)
T ss_dssp CSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE---E
T ss_pred cccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc---e
Confidence 9999999999 578999999999999999 45555555 6889999999998 899999999999999999432 2
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 158 LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 158 v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
...+. ..|...|.+++|+|++. +++++.|+.|++||++...
T Consensus 176 ~~~~~-~~~~~~i~~~~~~~~~~-------------~~~~~~dg~i~i~d~~~~~ 216 (313)
T 3odt_A 176 IKTFS-GIHNDVVRHLAVVDDGH-------------FISCSNDGLIKLVDMHTGD 216 (313)
T ss_dssp EEEEC-SSCSSCEEEEEEEETTE-------------EEEEETTSEEEEEETTTCC
T ss_pred EEEEe-ccCcccEEEEEEcCCCe-------------EEEccCCCeEEEEECCchh
Confidence 33333 13889999999999643 4555679999999997644
No 86
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.90 E-value=2.6e-22 Score=213.22 Aligned_cols=198 Identities=16% Similarity=0.235 Sum_probs=161.0
Q ss_pred CccCCCC-EEEEEECCCcEEEEECCCCce-------eEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC-
Q 008356 1 MYNCKDE-HLASISLSGDLILHNLASGAK-------AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS- 71 (568)
Q Consensus 1 afSpdG~-~LasGs~DG~V~VWDl~tg~~-------v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~- 71 (568)
+|+|++. +|++|+.||.|+|||+..+.. ...+.. |...|.+++|+|++..+|++++.||.|++||++...
T Consensus 188 ~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~ 266 (430)
T 2xyi_A 188 SWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT 266 (430)
T ss_dssp EECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS
T ss_pred EeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC
Confidence 4789888 999999999999999987432 344444 778899999999666699999999999999998762
Q ss_pred -ceeEEeccCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEECCC-CceeeEe-ecCCCeEEEEEecCC-CEEEEEEcCCeE
Q 008356 72 -PKVSWLKQHSAPTAGISFSSDDK-IIASVGLDKKLYTYDPGS-RRPSSCI-TYEAPFSSLAFIDDD-WILTAGTSNGRV 146 (568)
Q Consensus 72 -~~v~~l~~H~~~VtslafsPdg~-~LaSgs~DGtV~IWDlrt-~~~v~~~-~h~~~ItsLafsPdg-~~LasGs~DG~V 146 (568)
..+..+..|...|++++|+|++. +|++++.||.|++||+++ .+++..+ .|...|.+++|+|++ .+|++++.|+.|
T Consensus 267 ~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i 346 (430)
T 2xyi_A 267 SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRL 346 (430)
T ss_dssp SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCC
T ss_pred CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcE
Confidence 34566779999999999999776 789999999999999998 4556666 589999999999998 479999999999
Q ss_pred EEEECCCCCC-----------ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 147 VFYDIRGKPQ-----------PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 147 ~VWDlrt~~~-----------~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
+|||++.... +.......+|...|++++|+|++++ ++++++.|+.|++|++..
T Consensus 347 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~-----------~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 347 HVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPW-----------IICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp EEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTT-----------EEEEEETTSEEEEEEECH
T ss_pred EEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCC-----------EEEEEECCCCEEEeEccc
Confidence 9999987321 1223333478899999999997652 455556799999999864
No 87
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=7.6e-23 Score=214.58 Aligned_cols=195 Identities=11% Similarity=0.167 Sum_probs=154.7
Q ss_pred CccCCC--CEEEEEECCCcEEEEECCCCcee---------------------------------------EEeeCCCCCc
Q 008356 1 MYNCKD--EHLASISLSGDLILHNLASGAKA---------------------------------------AELKDPNEQV 39 (568)
Q Consensus 1 afSpdG--~~LasGs~DG~V~VWDl~tg~~v---------------------------------------~~l~~~h~~~ 39 (568)
+|+|++ .+|++++.||.|++||+.+++.. ..+...|...
T Consensus 100 ~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 100 RWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp EECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred EEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 478888 79999999999999998764431 1333457888
Q ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE-------EeccCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEECC
Q 008356 40 LRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS-------WLKQHSAPTAGISFSSDD-KIIASVGLDKKLYTYDPG 111 (568)
Q Consensus 40 Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~-------~l~~H~~~VtslafsPdg-~~LaSgs~DGtV~IWDlr 111 (568)
|.+++|+|+++ +|++| .|+.|++||+........ .+..|...|++++|+|++ ++|++++.|+.|++||++
T Consensus 180 v~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 257 (447)
T 3dw8_B 180 INSISINSDYE-TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMR 257 (447)
T ss_dssp CCEEEECTTSS-EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred eEEEEEcCCCC-EEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECc
Confidence 99999999988 78888 899999999984332233 256899999999999998 999999999999999999
Q ss_pred CCce----eeEe-ecCC------------CeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCC-----
Q 008356 112 SRRP----SSCI-TYEA------------PFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEA----- 169 (568)
Q Consensus 112 t~~~----v~~~-~h~~------------~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~----- 169 (568)
+++. +..+ .+.. .|.+++|+|++++|++++. +.|+|||++...+++..+. .|...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~--~~~~~~~~l~ 334 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ--VHEYLRSKLC 334 (447)
T ss_dssp TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE--SCGGGTTTHH
T ss_pred CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee--cccccccccc
Confidence 9876 5555 3443 8999999999999999999 9999999997445566665 45432
Q ss_pred ----------eeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 170 ----------VSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 170 ----------VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
+..++|+|++++|++ ++.|+.|++||+....
T Consensus 335 ~~~~~~~i~~~~~~~~s~~~~~l~s------------~s~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 335 SLYENDCIFDKFECCWNGSDSVVMT------------GSYNNFFRMFDRNTKR 375 (447)
T ss_dssp HHHHTSGGGCCCCEEECTTSSEEEE------------ECSTTEEEEEETTTCC
T ss_pred ccccccccccceEEEECCCCCEEEE------------eccCCEEEEEEcCCCc
Confidence 334899997665544 4669999999998754
No 88
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.3e-22 Score=206.43 Aligned_cols=191 Identities=14% Similarity=0.120 Sum_probs=148.5
Q ss_pred ccCCCCEEEEEECCCcEEEEECC---------CCceeEEeeCCCCCcEEEEEEcc--CCCeEEEEEeCCCeEEEEECCCC
Q 008356 2 YNCKDEHLASISLSGDLILHNLA---------SGAKAAELKDPNEQVLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGR 70 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~---------tg~~v~~l~~~h~~~Vs~Lafsp--dg~~lLaTgs~DGtV~VWDl~t~ 70 (568)
|+|+ +++++.|+.|++|+.. +++.+..+...|.+.|.+++|+| +++ +|++++.||.|++||+.++
T Consensus 84 ~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~ 159 (343)
T 3lrv_A 84 EHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDD 159 (343)
T ss_dssp CCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSS
T ss_pred eCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCC
Confidence 5666 8999999999999654 55556666655778899999999 887 8999999999999999988
Q ss_pred CceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCcee-eEe-e-cCCCeEEEEEecCCCEEEEEEcCCeEE
Q 008356 71 SPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS-SCI-T-YEAPFSSLAFIDDDWILTAGTSNGRVV 147 (568)
Q Consensus 71 ~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v-~~~-~-h~~~ItsLafsPdg~~LasGs~DG~V~ 147 (568)
+........|...|++++|+|++.+|++|+.|+.|++||+++++.+ ..+ . |...|.+++|+|++.+|++++ |+.|+
T Consensus 160 ~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~ 238 (343)
T 3lrv_A 160 SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVV 238 (343)
T ss_dssp CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEE
T ss_pred cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEE
Confidence 7532222456668999999999999999999999999999999877 555 4 899999999999999999999 55999
Q ss_pred EEECCCCCCceEEEee-cCCCCCe--eEEEEccCCCeEEEeccCCCCeEEEEecC-CCcEEcCCCCC
Q 008356 148 FYDIRGKPQPLTVLRA-CSSSEAV--SSLCWQRAKPVFIDETTCKAETALLGGAV-GDSILMPDPLP 210 (568)
Q Consensus 148 VWDlrt~~~~v~~l~~-~~h~~~V--tsLafspdg~~Las~s~ssd~~~Lls~s~-Dg~V~VWDlr~ 210 (568)
+||++...... .+.. ..|...+ .+++|+|++++|+++ +. |+.|++|++..
T Consensus 239 iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~l~~~------------s~~d~~i~v~~~~~ 292 (343)
T 3lrv_A 239 CFDLRKDVGTL-AYPTYTIPEFKTGTVTYDIDDSGKNMIAY------------SNESNSLTIYKFDK 292 (343)
T ss_dssp EEETTSSTTCB-SSCCCBC-----CCEEEEECTTSSEEEEE------------ETTTTEEEEEEECT
T ss_pred EEEcCCCCcce-eecccccccccccceEEEECCCCCEEEEe------------cCCCCcEEEEEEcc
Confidence 99999875322 1211 1233334 369999987766554 34 88899998754
No 89
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.90 E-value=3.8e-23 Score=219.69 Aligned_cols=209 Identities=14% Similarity=0.174 Sum_probs=164.0
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCCCceeEEeeCCC--CCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 008356 1 MYNC-KDEHLASISLSGDLILHNLASGAKAAELKDPN--EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (568)
Q Consensus 1 afSp-dG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h--~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l 77 (568)
+|+| ++++|++|+.||+|+|||++++.. ..+..++ ...+.+++|++++. +|++|+.||.|++||+++.. +..+
T Consensus 171 ~f~p~~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~~~--~~~~ 246 (435)
T 4e54_B 171 KFNPLNTNQFYASSMEGTTRLQDFKGNIL-RVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDGKE--LWNL 246 (435)
T ss_dssp EECSSCTTEEEEECSSSCEEEEETTSCEE-EEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSSCB--CCCS
T ss_pred EEeCCCCCEEEEEeCCCEEEEeeccCCce-eEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCcce--eEEE
Confidence 4787 689999999999999999976543 3343323 34567899999998 89999999999999997654 5678
Q ss_pred ccCCCCeEEEEEcCCCC-EEEEEeCCCeEEEEECCCCceeeE----eecCCCeEEEEEecCCCEEEEEEcCCeEEEEECC
Q 008356 78 KQHSAPTAGISFSSDDK-IIASVGLDKKLYTYDPGSRRPSSC----ITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIR 152 (568)
Q Consensus 78 ~~H~~~VtslafsPdg~-~LaSgs~DGtV~IWDlrt~~~v~~----~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlr 152 (568)
.+|...|++++|+|++. +|++++.|+.|++||+++.+.... ..|...|.+++|+|++++|++++.||.|+|||++
T Consensus 247 ~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 247 RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESS
T ss_pred ecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECC
Confidence 89999999999999765 788999999999999998654433 3688999999999999999999999999999999
Q ss_pred CCCCceEEEeec-CC--CCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 153 GKPQPLTVLRAC-SS--SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 153 t~~~~v~~l~~~-~h--~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
....+....... .+ ...+..+.|++++.+++++...++..+++.+..++.|++||+.....
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~ 390 (435)
T 4e54_B 327 QWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM 390 (435)
T ss_dssp SSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE
T ss_pred CCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE
Confidence 875443332210 11 12344578999999988885555556666666678999999876543
No 90
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.90 E-value=9.7e-23 Score=214.57 Aligned_cols=192 Identities=10% Similarity=0.145 Sum_probs=159.0
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCC-CCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-c
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDP-NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-Q 79 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~-h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~-~ 79 (568)
+++++++|++|+.||.|++||+.+++.+..+..+ |...|.+++|+|+++ +|++|+.||.|++||++.... +..+. .
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~~~-~~~~~~~ 255 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRFNVL-IRSWSFG 255 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTTTEE-EEEEBCT
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCCccE-EEEEecC
Confidence 4578999999999999999999999999999875 677899999999987 899999999999999998764 44443 7
Q ss_pred CCCCeEEEEEcC----CCCEEEEEeCCCeEEEEECCCCceeeEee---------------------------cCCCeEEE
Q 008356 80 HSAPTAGISFSS----DDKIIASVGLDKKLYTYDPGSRRPSSCIT---------------------------YEAPFSSL 128 (568)
Q Consensus 80 H~~~VtslafsP----dg~~LaSgs~DGtV~IWDlrt~~~v~~~~---------------------------h~~~ItsL 128 (568)
|...|++++|+| ++.+|++++.|+.|++||+++++++..+. |...|.++
T Consensus 256 ~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l 335 (437)
T 3gre_A 256 DHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTI 335 (437)
T ss_dssp TCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCE
T ss_pred CCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEE
Confidence 888999997765 57799999999999999999988776653 44568899
Q ss_pred EEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeec-----------------------------------CCCCCeeEE
Q 008356 129 AFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRAC-----------------------------------SSSEAVSSL 173 (568)
Q Consensus 129 afsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~-----------------------------------~h~~~VtsL 173 (568)
+|+ ++++|++|+.|+.|++||+++... ...+..+ .|...|+++
T Consensus 336 ~~~-~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i 413 (437)
T 3gre_A 336 SVS-NDKILLTDEATSSIVMFSLNELSS-SKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSI 413 (437)
T ss_dssp EEE-TTEEEEEEGGGTEEEEEETTCGGG-CEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEE
T ss_pred EEC-CceEEEecCCCCeEEEEECCCccc-ceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeE
Confidence 999 779999999999999999998743 3333311 278889999
Q ss_pred EEccCCCeEEEeccCCCCeEEEEecCCCcEEcCC
Q 008356 174 CWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (568)
Q Consensus 174 afspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWD 207 (568)
+|.++ .+..+|++++.||.|++|+
T Consensus 414 ~~~~~----------~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 414 STCEV----------DETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EEEES----------SSSEEEEEEETTSCEEEEC
T ss_pred eeecc----------CCceEEEEEcCCceEEEeC
Confidence 98874 2356788888899999995
No 91
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.2e-22 Score=213.84 Aligned_cols=202 Identities=13% Similarity=0.168 Sum_probs=162.1
Q ss_pred CccC-CCCEEEEEECCCcEEEEECCC---Cc---eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC---CC
Q 008356 1 MYNC-KDEHLASISLSGDLILHNLAS---GA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT---GR 70 (568)
Q Consensus 1 afSp-dG~~LasGs~DG~V~VWDl~t---g~---~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~---t~ 70 (568)
+|+| ++++|++|+.||.|+|||+.+ +. ....+. |...|.+++|+++++ +|++|+.||.|++||+. .+
T Consensus 70 ~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~-~l~s~s~dg~i~vwd~~~~~~~ 146 (437)
T 3gre_A 70 AVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYD--CSSTVTQITMIPNFD-AFAVSSKDGQIIVLKVNHYQQE 146 (437)
T ss_dssp EEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEE--CSSCEEEEEECTTSS-EEEEEETTSEEEEEEEEEEEET
T ss_pred EECCCCCCEEEEecCCceEEEeECcccccCcccceeeecc--CCCCEEEEEEeCCCC-EEEEEeCCCEEEEEEeccccCC
Confidence 4789 999999999999999999876 43 233333 788999999999887 89999999999999994 33
Q ss_pred CceeEEec----------c--CCCCeEEEE--EcCCCCEEEEEeCCCeEEEEECCCCceeeEee---cCCCeEEEEEecC
Q 008356 71 SPKVSWLK----------Q--HSAPTAGIS--FSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT---YEAPFSSLAFIDD 133 (568)
Q Consensus 71 ~~~v~~l~----------~--H~~~Vtsla--fsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~---h~~~ItsLafsPd 133 (568)
.. ..... . +...+.++. +++++.+|++++.|+.|++||+++++++..+. |...|.+++|+|+
T Consensus 147 ~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~ 225 (437)
T 3gre_A 147 SE-VKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEE 225 (437)
T ss_dssp TE-EEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTT
T ss_pred ce-eeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCC
Confidence 21 11111 2 566777777 55789999999999999999999999888774 7899999999999
Q ss_pred CCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 134 DWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 134 g~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
+++|++|+.||.|++||++.. +++..+. ..|...|.+++|+|. ...++.++++++.|+.|++||++....
T Consensus 226 ~~~l~s~~~dg~i~iwd~~~~-~~~~~~~-~~~~~~v~~~~~~~~--------~s~~~~~l~s~~~dg~i~iwd~~~~~~ 295 (437)
T 3gre_A 226 CCVLILGTTRGIIDIWDIRFN-VLIRSWS-FGDHAPITHVEVCQF--------YGKNSVIVVGGSSKTFLTIWNFVKGHC 295 (437)
T ss_dssp SCEEEEEETTSCEEEEETTTT-EEEEEEB-CTTCEEEEEEEECTT--------TCTTEEEEEEESTTEEEEEEETTTTEE
T ss_pred CCEEEEEcCCCeEEEEEcCCc-cEEEEEe-cCCCCceEEEEeccc--------cCCCccEEEEEcCCCcEEEEEcCCCcE
Confidence 999999999999999999986 3333332 257789999998874 234567788888899999999987654
Q ss_pred ccc
Q 008356 214 TSS 216 (568)
Q Consensus 214 ~~s 216 (568)
...
T Consensus 296 ~~~ 298 (437)
T 3gre_A 296 QYA 298 (437)
T ss_dssp EEE
T ss_pred EEE
Confidence 433
No 92
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.90 E-value=2.6e-22 Score=218.45 Aligned_cols=192 Identities=15% Similarity=0.160 Sum_probs=161.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCC----ceeEEeeCCCCCc-EEEEEEcc--CCCeEEEEEeCCCeEEEEECCCC---
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASG----AKAAELKDPNEQV-LRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGR--- 70 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg----~~v~~l~~~h~~~-Vs~Lafsp--dg~~lLaTgs~DGtV~VWDl~t~--- 70 (568)
+|+|++++|++++ ++.|+|||+.++ +.+..+.+ |... |.+++|+| +++ +|++++.||.|++||+.++
T Consensus 25 ~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~-h~~~~v~~~~~sp~~~~~-~l~s~~~dg~v~vw~~~~~~~~ 101 (615)
T 1pgu_A 25 SYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTG-HGSSVVTTVKFSPIKGSQ-YLCSGDESGKVIVWGWTFDKES 101 (615)
T ss_dssp EEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECT-TTTSCEEEEEECSSTTCC-EEEEEETTSEEEEEEEEEEGGG
T ss_pred EECCCCCEEEEec-CCeEEEEECCCCCCccccceEEec-CCCceEEEEEECcCCCCC-EEEEecCCCEEEEEeCCCCccc
Confidence 4899999999998 889999999988 88888887 6667 99999999 987 8999999999999999643
Q ss_pred ----CceeEEeccCCCCeEEEEEcCCCCEEEEEeCC----CeEEEEECCCCceeeEe-ecCCCeEEEEEecCCC-EEEEE
Q 008356 71 ----SPKVSWLKQHSAPTAGISFSSDDKIIASVGLD----KKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDW-ILTAG 140 (568)
Q Consensus 71 ----~~~v~~l~~H~~~VtslafsPdg~~LaSgs~D----GtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~-~LasG 140 (568)
......+..|...|.+++|+|++++|++++.+ +.|++|| .++.+..+ .|...|.+++|+|++. +|+++
T Consensus 102 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 179 (615)
T 1pgu_A 102 NSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTV 179 (615)
T ss_dssp TEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEE
T ss_pred ccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEE
Confidence 23466778899999999999999999999988 6899998 44555555 6889999999999997 89999
Q ss_pred EcCCeEEEEECCCCCCceEEEeecCCCC---CeeEEEEccC-CCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 141 TSNGRVVFYDIRGKPQPLTVLRACSSSE---AVSSLCWQRA-KPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 141 s~DG~V~VWDlrt~~~~v~~l~~~~h~~---~VtsLafspd-g~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
+.|+.|++||++... ....+. .|.. .|.+++|+|+ +++++ +++.|+.|++||++...
T Consensus 180 ~~d~~v~vwd~~~~~-~~~~~~--~~~~~~~~v~~~~~~~~~~~~l~------------~~~~dg~i~vwd~~~~~ 240 (615)
T 1pgu_A 180 GDDGSVVFYQGPPFK-FSASDR--THHKQGSFVRDVEFSPDSGEFVI------------TVGSDRKISCFDGKSGE 240 (615)
T ss_dssp ETTTEEEEEETTTBE-EEEEEC--SSSCTTCCEEEEEECSTTCCEEE------------EEETTCCEEEEETTTCC
T ss_pred eCCCcEEEEeCCCcc-eeeeec--ccCCCCceEEEEEECCCCCCEEE------------EEeCCCeEEEEECCCCC
Confidence 999999999998763 344444 6888 9999999997 65554 44669999999987544
No 93
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.90 E-value=3e-22 Score=226.80 Aligned_cols=196 Identities=15% Similarity=0.236 Sum_probs=171.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++|++++.||.|+|||+.+++.+..+.+ |...|.+++|+|+++ +|++++.||.|++||+.++......+..|
T Consensus 62 ~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~-~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~~~~~~~~~~~~ 139 (814)
T 3mkq_A 62 KFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEA-HPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGH 139 (814)
T ss_dssp EEEGGGTEEEEEETTSEEEEEETTTCCEEEEEEC-CSSCEEEEEECSSSS-EEEEEETTSEEEEEEGGGTSEEEEEEECC
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEec-CCCCEEEEEEeCCCC-EEEEEcCCCEEEEEECCCCceEEEEEcCC
Confidence 4899999999999999999999999999998886 778899999999998 79999999999999998875567788899
Q ss_pred CCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCceeeEe--ecCCCeEEEEEec--CCCEEEEEEcCCeEEEEECCCCC
Q 008356 81 SAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFID--DDWILTAGTSNGRVVFYDIRGKP 155 (568)
Q Consensus 81 ~~~VtslafsP-dg~~LaSgs~DGtV~IWDlrt~~~v~~~--~h~~~ItsLafsP--dg~~LasGs~DG~V~VWDlrt~~ 155 (568)
...|.+++|+| ++++|++++.|+.|++||+++++....+ .+...+.+++|+| ++.+|++++.||.|++||++...
T Consensus 140 ~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 219 (814)
T 3mkq_A 140 EHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKS 219 (814)
T ss_dssp SSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTE
T ss_pred CCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCc
Confidence 99999999999 8899999999999999999988776666 3448899999999 99999999999999999998873
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 156 ~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
....+. +|...|.+++|+|+++++++ ++.|+.|++||+.....
T Consensus 220 -~~~~~~--~~~~~v~~~~~~~~~~~l~~------------~~~dg~v~vwd~~~~~~ 262 (814)
T 3mkq_A 220 -CVATLE--GHMSNVSFAVFHPTLPIIIS------------GSEDGTLKIWNSSTYKV 262 (814)
T ss_dssp -EEEEEE--CCSSCEEEEEECSSSSEEEE------------EETTSCEEEEETTTCSE
T ss_pred -EEEEEc--CCCCCEEEEEEcCCCCEEEE------------EeCCCeEEEEECCCCcE
Confidence 344444 78899999999997665544 45699999999987554
No 94
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.90 E-value=1.9e-21 Score=205.99 Aligned_cols=186 Identities=14% Similarity=0.263 Sum_probs=158.6
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~ 81 (568)
+.+++++|++|+.||.|++||+.+++.+..+.+ |...|.+++| +++ +|++|+.||.|++||+.+++ .+..+..|.
T Consensus 139 ~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~--~~~-~l~sg~~dg~i~vwd~~~~~-~~~~~~~h~ 213 (435)
T 1p22_A 139 LQYDDQKIVSGLRDNTIKIWDKNTLECKRILTG-HTGSVLCLQY--DER-VIITGSSDSTVRVWDVNTGE-MLNTLIHHC 213 (435)
T ss_dssp EECCSSEEEEEESSSCEEEEESSSCCEEEEECC-CSSCEEEEEC--CSS-EEEEEETTSCEEEEESSSCC-EEEEECCCC
T ss_pred EEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcC-CCCcEEEEEE--CCC-EEEEEcCCCeEEEEECCCCc-EEEEEcCCC
Confidence 456899999999999999999999999998886 7778899988 555 89999999999999998887 477788999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCcee---eEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCc
Q 008356 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS---SCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (568)
Q Consensus 82 ~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v---~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~ 157 (568)
..|.+++|+ +.+|++++.|+.|++||+++++.. ..+ .|...|.+++| ++++|++|+.||.|++||+++.. .
T Consensus 214 ~~v~~l~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~-~ 288 (435)
T 1p22_A 214 EAVLHLRFN--NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE-F 288 (435)
T ss_dssp SCEEEEECC--TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCC-E
T ss_pred CcEEEEEEc--CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCc-E
Confidence 999999997 469999999999999999987755 233 68889999999 68899999999999999999874 4
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 158 LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 158 v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
+..+. +|...|.++.|+. .++++++.|+.|++||++....
T Consensus 289 ~~~~~--~~~~~v~~~~~~~--------------~~l~~g~~dg~i~iwd~~~~~~ 328 (435)
T 1p22_A 289 VRTLN--GHKRGIACLQYRD--------------RLVVSGSSDNTIRLWDIECGAC 328 (435)
T ss_dssp EEEEE--CCSSCEEEEEEET--------------TEEEEEETTSCEEEEETTTCCE
T ss_pred EEEEc--CCCCcEEEEEeCC--------------CEEEEEeCCCeEEEEECCCCCE
Confidence 45555 7899999999843 2566667799999999976543
No 95
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.89 E-value=2.6e-22 Score=202.57 Aligned_cols=192 Identities=11% Similarity=0.069 Sum_probs=162.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc---eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC-CCCCceeEE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT-TGRSPKVSW 76 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~---~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl-~t~~~~v~~ 76 (568)
+|+|++++|++++.||.|+|||+.+++ ....+.. |...|.+++|+++++.+|++|+.||.|++||+ .... ...
T Consensus 18 ~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~--~~~ 94 (342)
T 1yfq_A 18 KIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLR-YKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPS--FQA 94 (342)
T ss_dssp EEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEE-CSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSS--EEE
T ss_pred EEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeee-cCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCc--eEe
Confidence 488999999999999999999998777 2334443 77889999999997526899999999999999 8776 567
Q ss_pred ecc--CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC---------CceeeEeecCCCeEEEEEecCCCEEEEEEcCCe
Q 008356 77 LKQ--HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS---------RRPSSCITYEAPFSSLAFIDDDWILTAGTSNGR 145 (568)
Q Consensus 77 l~~--H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt---------~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~ 145 (568)
+.. |...|.+++|+| +++|++++.|+.|++||+++ ++++..+.+...|.+++|++++ |++++.|+.
T Consensus 95 ~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~ 171 (342)
T 1yfq_A 95 LTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQ 171 (342)
T ss_dssp CBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTE
T ss_pred ccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCe
Confidence 788 999999999999 99999999999999999998 7777777799999999999887 999999999
Q ss_pred EEEEECCC-CCCceEEEeecCCCCCeeEEEEcc-CCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCC
Q 008356 146 VVFYDIRG-KPQPLTVLRACSSSEAVSSLCWQR-AKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (568)
Q Consensus 146 V~VWDlrt-~~~~v~~l~~~~h~~~VtsLafsp-dg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~ 211 (568)
|++||++. ........ ...|...|.+++|+| ++++++++ +.|+.|++||++..
T Consensus 172 i~i~d~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~~l~~~------------~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 172 VQWFRLPLCEDDNGTIE-ESGLKYQIRDVALLPKEQEGYACS------------SIDGRVAVEFFDDQ 226 (342)
T ss_dssp EEEEESSCCTTCCCEEE-ECSCSSCEEEEEECSGGGCEEEEE------------ETTSEEEEEECCTT
T ss_pred EEEEECCccccccceee-ecCCCCceeEEEECCCCCCEEEEE------------ecCCcEEEEEEcCC
Confidence 99999998 54333322 236888999999999 86655444 56999999998764
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=4.7e-22 Score=211.95 Aligned_cols=200 Identities=16% Similarity=0.155 Sum_probs=161.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc---eeEEeeCC------------------------------------------
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGA---KAAELKDP------------------------------------------ 35 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~---~v~~l~~~------------------------------------------ 35 (568)
+|+++|++|+++ .++.|++||+.+++ .+..+..+
T Consensus 11 ~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (450)
T 2vdu_B 11 LTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKRTAA 89 (450)
T ss_dssp EECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------------
T ss_pred EecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCccccccCc
Confidence 378999966655 57899999999998 65555431
Q ss_pred -----------CCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC--CCCceeEEec--cCCCCeEEEEEcCCCCEEEEEe
Q 008356 36 -----------NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT--GRSPKVSWLK--QHSAPTAGISFSSDDKIIASVG 100 (568)
Q Consensus 36 -----------h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~--t~~~~v~~l~--~H~~~VtslafsPdg~~LaSgs 100 (568)
+...|.+++|+|+++.++++++.||.|+|||+. ++.. +..+. .|...|++++|+|++++|++++
T Consensus 90 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 168 (450)
T 2vdu_B 90 KVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNV-LKLRKRFCFSKRPNAISIAEDDTTVIIAD 168 (450)
T ss_dssp ----------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSC-EEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred cccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCce-eeeeecccCCCCceEEEEcCCCCEEEEEe
Confidence 222699999999998556999999999999998 6553 44444 6778999999999999999999
Q ss_pred CCCeEEEEECCCCceee----Ee-ecCCCeEEEEEecC---CCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeE
Q 008356 101 LDKKLYTYDPGSRRPSS----CI-TYEAPFSSLAFIDD---DWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSS 172 (568)
Q Consensus 101 ~DGtV~IWDlrt~~~v~----~~-~h~~~ItsLafsPd---g~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~Vts 172 (568)
.|+.|++||+.+++... .+ .|...|.+++|+|+ +++|++|+.|+.|++||+++.......+. +|...|.+
T Consensus 169 ~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~--~h~~~v~~ 246 (450)
T 2vdu_B 169 KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLF--GHKHFVSS 246 (450)
T ss_dssp TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECC--CCSSCEEE
T ss_pred CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeec--CCCCceEE
Confidence 99999999998876543 33 68899999999999 99999999999999999998754322233 79999999
Q ss_pred EEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCccccc
Q 008356 173 LCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSSV 217 (568)
Q Consensus 173 Lafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~~s~ 217 (568)
++|+ ++++|+++ +.|+.|++||++.......+
T Consensus 247 ~~~s-d~~~l~s~------------~~d~~v~vwd~~~~~~~~~~ 278 (450)
T 2vdu_B 247 ICCG-KDYLLLSA------------GGDDKIFAWDWKTGKNLSTF 278 (450)
T ss_dssp EEEC-STTEEEEE------------ESSSEEEEEETTTCCEEEEE
T ss_pred EEEC-CCCEEEEE------------eCCCeEEEEECCCCcEeeee
Confidence 9999 87766555 56999999999876654433
No 97
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.89 E-value=1.3e-21 Score=207.67 Aligned_cols=189 Identities=20% Similarity=0.231 Sum_probs=161.9
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEcc--CCCeEEEEEeCCCeEEEEECCCCCce------
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGRSPK------ 73 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafsp--dg~~lLaTgs~DGtV~VWDl~t~~~~------ 73 (568)
|++++ +|++|+.||.|++||+.+++.+..+.+ |...|.+++|++ ++ .+|++|+.||.|++||+......
T Consensus 170 ~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~ 246 (464)
T 3v7d_B 170 YAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEG-HNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEE 246 (464)
T ss_dssp ECSTT-EEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------
T ss_pred EcCCC-EEEEEeCCCCEEEEECCCCcEEEEECC-CCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCccccccccc
Confidence 66776 999999999999999999999988886 778899999995 44 48999999999999999765422
Q ss_pred ----------------eEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCE
Q 008356 74 ----------------VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWI 136 (568)
Q Consensus 74 ----------------v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~ 136 (568)
...+.+|...|.++ ++++++|++++.|+.|++||+++++++..+ .|...|.+++|+|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 324 (464)
T 3v7d_B 247 HDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKR 324 (464)
T ss_dssp CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTE
T ss_pred CCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCE
Confidence 45677899888887 567899999999999999999999988877 58899999999999999
Q ss_pred EEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 137 LTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 137 LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
|++|+.||.|++||+++.. ++..+. +|...|.+++|++ .++++++.|+.|++||++...
T Consensus 325 l~sg~~dg~i~vwd~~~~~-~~~~~~--~h~~~v~~~~~~~--------------~~l~s~s~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 325 CISASMDTTIRIWDLENGE-LMYTLQ--GHTALVGLLRLSD--------------KFLVSAAADGSIRGWDANDYS 383 (464)
T ss_dssp EEEEETTSCEEEEETTTTE-EEEEEC--CCSSCEEEEEECS--------------SEEEEEETTSEEEEEETTTCC
T ss_pred EEEEeCCCcEEEEECCCCc-EEEEEe--CCCCcEEEEEEcC--------------CEEEEEeCCCcEEEEECCCCc
Confidence 9999999999999999873 444454 7999999999974 256666779999999987643
No 98
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.89 E-value=4.3e-21 Score=191.26 Aligned_cols=197 Identities=15% Similarity=0.213 Sum_probs=158.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~-~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~ 79 (568)
+|++++ +||+| .|++|+|||+.+++.+..+.. .|...|.+++|+++++ +|++|+.||+|++||+.+++ .+..+.+
T Consensus 32 ~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~-~l~sgs~Dg~v~iw~~~~~~-~~~~~~~ 107 (318)
T 4ggc_A 32 DWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN-YLAVGTSSAEVQLWDVQQQK-RLRNMTS 107 (318)
T ss_dssp EECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS-EEEEEETTSEEEEEETTTTE-EEEEEEC
T ss_pred EECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCC-EEEEEECCCcEEEeecCCce-eEEEecC
Confidence 377765 67766 599999999999998888764 3567899999999998 89999999999999999887 4677889
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCcee-eEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCc
Q 008356 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS-SCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (568)
Q Consensus 80 H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v-~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~ 157 (568)
|...+.++.+. +..+++++.++.+++|+....... ..+ .|...+.++++.+++++|++++.|+.|++||+++.+..
T Consensus 108 h~~~~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 185 (318)
T 4ggc_A 108 HSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 185 (318)
T ss_dssp CSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB
T ss_pred ccceEEEeecC--CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc
Confidence 99988876654 689999999999999999876443 333 68999999999999999999999999999999875432
Q ss_pred eE-EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 158 LT-VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 158 v~-~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
.. ......|.+.|.++++.+++..++ .+.+++.++.|++||.+...
T Consensus 186 ~~~~~~~~~~~~~v~~~~~~~~~~~~~---------~~~~~~~~~~i~lwd~~~~~ 232 (318)
T 4ggc_A 186 WVPLQTFTQHQGAVKAVAWCPWQSNVL---------ATGGGTSDRHIRIWNVCSGA 232 (318)
T ss_dssp SCCSEEECCCCSCEEEEEECTTSTTEE---------EEEECTTTCEEEEEETTTCC
T ss_pred ccceeeecccCCceEEEEecCCCCcEE---------EEEecCCCCEEEEEeccccc
Confidence 11 122336888999999999754332 23455678999999986644
No 99
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.89 E-value=4.8e-22 Score=227.28 Aligned_cols=201 Identities=11% Similarity=0.173 Sum_probs=166.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECC--CCceeEEeeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ceeE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLA--SGAKAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PKVS 75 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~--tg~~v~~l~~~h~~~Vs~Lafspd--g~~lLaTgs~DGtV~VWDl~t~~-~~v~ 75 (568)
+|+|++++|++|+.||.|+|||+. +++.+..+.+ |...|.+++|+++ ++ +|++|+.||.|++||+.++. ....
T Consensus 16 ~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~-h~~~V~~l~~s~~~~~~-~l~s~s~Dg~I~vwd~~~~~~~~~~ 93 (753)
T 3jro_A 16 VLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGT-ILASCSYDGKVLIWKEENGRWSQIA 93 (753)
T ss_dssp CCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECC-CSSCEEEEEECCTTSCS-EEEEEETTSCEEEEEEETTEEEEEE
T ss_pred EECCCCCeEEEEECCCcEEEEecCCCCCccceeccC-CcCceEEEEecCCCCCC-EEEEEeCCCeEEEEECCCCcccccc
Confidence 589999999999999999999997 4456667776 7788999999987 66 89999999999999998764 2366
Q ss_pred EeccCCCCeEEEEEcCC--CCEEEEEeCCCeEEEEECCCCce---eeEeecCCCeEEEEEec-------------CCCEE
Q 008356 76 WLKQHSAPTAGISFSSD--DKIIASVGLDKKLYTYDPGSRRP---SSCITYEAPFSSLAFID-------------DDWIL 137 (568)
Q Consensus 76 ~l~~H~~~VtslafsPd--g~~LaSgs~DGtV~IWDlrt~~~---v~~~~h~~~ItsLafsP-------------dg~~L 137 (568)
.+..|...|++++|+|+ +++|++++.||.|++||++++.. .....|...|.+++|+| ++.+|
T Consensus 94 ~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l 173 (753)
T 3jro_A 94 VHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKF 173 (753)
T ss_dssp EECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCE
T ss_pred cccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEE
Confidence 77889999999999998 99999999999999999998733 22336889999999999 58999
Q ss_pred EEEEcCCeEEEEECCCCCCceEEE-eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 138 TAGTSNGRVVFYDIRGKPQPLTVL-RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 138 asGs~DG~V~VWDlrt~~~~v~~l-~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
++|+.||.|++||++......... ...+|...|++++|+|++ ..+.++++++.|+.|++||++...
T Consensus 174 ~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~---------~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 174 VTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV---------LLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp EEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC---------SSSEEEEEEESSSCEEEEEESSSS
T ss_pred EEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCC---------CCCCEEEEEecCCEEEEecCCCCC
Confidence 999999999999998865432222 234799999999999961 014456666779999999987643
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=7.6e-22 Score=210.32 Aligned_cols=194 Identities=12% Similarity=0.078 Sum_probs=161.1
Q ss_pred CccCCCCEE-EEEECCCcEEEEECC--CCceeEEeeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc---e
Q 008356 1 MYNCKDEHL-ASISLSGDLILHNLA--SGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP---K 73 (568)
Q Consensus 1 afSpdG~~L-asGs~DG~V~VWDl~--tg~~v~~l~~-~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~---~ 73 (568)
+|+|++++| ++++.||.|+|||+. +++.+..+.. .+...|.+++|+|+++ +|++|+.||.|++|++..... .
T Consensus 109 ~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~~g~v~~~~~~~~~~~~~~ 187 (450)
T 2vdu_B 109 RLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT-TVIIADKFGDVYSIDINSIPEEKFT 187 (450)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS-EEEEEETTSEEEEEETTSCCCSSCC
T ss_pred EEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC-EEEEEeCCCcEEEEecCCccccccc
Confidence 489999996 888899999999998 8888877763 2567899999999998 899999999999999976652 1
Q ss_pred eEEeccCCCCeEEEEEcCC---CCEEEEEeCCCeEEEEECCCCceeeEe--ecCCCeEEEEEecCCCEEEEEEcCCeEEE
Q 008356 74 VSWLKQHSAPTAGISFSSD---DKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (568)
Q Consensus 74 v~~l~~H~~~VtslafsPd---g~~LaSgs~DGtV~IWDlrt~~~v~~~--~h~~~ItsLafsPdg~~LasGs~DG~V~V 148 (568)
...+.+|...|++++|+|+ +++|++++.|+.|++||+++++.+..+ .|...|.+++|+ ++++|++++.|+.|+|
T Consensus 188 ~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~v 266 (450)
T 2vdu_B 188 QEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFA 266 (450)
T ss_dssp CCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEE
T ss_pred ceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEE
Confidence 2356789999999999999 999999999999999999998877663 688999999999 9999999999999999
Q ss_pred EECCCCCCceEEEeec-----------------------CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEc
Q 008356 149 YDIRGKPQPLTVLRAC-----------------------SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILM 205 (568)
Q Consensus 149 WDlrt~~~~v~~l~~~-----------------------~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~V 205 (568)
||+++.. .+..+... .+...|.+++|+|++++++++ +..|+.|++
T Consensus 267 wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~-----------~~~d~~i~i 334 (450)
T 2vdu_B 267 WDWKTGK-NLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFF-----------VEATKCIII 334 (450)
T ss_dssp EETTTCC-EEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEE-----------ETTCSEEEE
T ss_pred EECCCCc-EeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEE-----------ECCCCeEEE
Confidence 9999874 33444311 223568899999976655444 225899999
Q ss_pred CCC
Q 008356 206 PDP 208 (568)
Q Consensus 206 WDl 208 (568)
||+
T Consensus 335 w~~ 337 (450)
T 2vdu_B 335 LEM 337 (450)
T ss_dssp EEE
T ss_pred EEe
Confidence 998
No 101
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.88 E-value=7.2e-22 Score=230.82 Aligned_cols=192 Identities=10% Similarity=0.076 Sum_probs=157.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|++++||+|+.||.|+||+..+.+....+. |...|.+++|++ ++ +|++++.|++|+|||+.+++. +..+. |
T Consensus 24 afspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~--~~~~V~~l~fsp-g~-~L~S~s~D~~v~lWd~~~~~~-~~~~~-~ 97 (902)
T 2oaj_A 24 AFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE--DRSAIKEMRFVK-GI-YLVVINAKDTVYVLSLYSQKV-LTTVF-V 97 (902)
T ss_dssp EEETTTTEEEEEETTSEEEEECSTTCEEEEECS--SCCCEEEEEEET-TT-EEEEEETTCEEEEEETTTCSE-EEEEE-C
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC--CCCCEEEEEEcC-CC-EEEEEECcCeEEEEECCCCcE-EEEEc-C
Confidence 589999999999999999999987776655443 677899999999 76 899999999999999988774 44443 7
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceee-----------E-eecCCCeEEEEEecC-CCEEEEEEcCCeEE
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSS-----------C-ITYEAPFSSLAFIDD-DWILTAGTSNGRVV 147 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~-----------~-~~h~~~ItsLafsPd-g~~LasGs~DG~V~ 147 (568)
...|++++|+|++++|++|+.||.|++||+++++... . ..|.+.|.+++|+|+ +.+|++|+.||.|
T Consensus 98 ~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v- 176 (902)
T 2oaj_A 98 PGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL- 176 (902)
T ss_dssp SSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-
T ss_pred CCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-
Confidence 7889999999999999999999999999999887531 1 247789999999996 5789999999999
Q ss_pred EEECCCCCCceEEEeec----------------CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCC
Q 008356 148 FYDIRGKPQPLTVLRAC----------------SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (568)
Q Consensus 148 VWDlrt~~~~v~~l~~~----------------~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~ 211 (568)
+||++... +...+..+ .|...|++++|+|+|++|+++ +.|+.|++||++..
T Consensus 177 lWd~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg------------s~Dg~i~lWd~~~g 243 (902)
T 2oaj_A 177 TYSLVENE-IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI------------HEDNSLVFWDANSG 243 (902)
T ss_dssp EEETTTTE-EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE------------ETTCCEEEEETTTC
T ss_pred EEECCCCc-eEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE------------ECCCeEEEEECCCC
Confidence 99999873 34444311 235789999999976655544 66999999999765
Q ss_pred C
Q 008356 212 V 212 (568)
Q Consensus 212 ~ 212 (568)
.
T Consensus 244 ~ 244 (902)
T 2oaj_A 244 H 244 (902)
T ss_dssp C
T ss_pred c
Confidence 4
No 102
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.88 E-value=9.9e-22 Score=198.31 Aligned_cols=192 Identities=10% Similarity=0.051 Sum_probs=156.6
Q ss_pred CccCCCC-EEEEEECCCcEEEEEC-CCCceeEEeeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC--------
Q 008356 1 MYNCKDE-HLASISLSGDLILHNL-ASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG-------- 69 (568)
Q Consensus 1 afSpdG~-~LasGs~DG~V~VWDl-~tg~~v~~l~~-~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t-------- 69 (568)
+|+|+++ +|++|+.||.|++||+ .+++. ..+.. .|...|.+++|++ +. +|++++.|+.|++||+..
T Consensus 63 ~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~ 139 (342)
T 1yfq_A 63 NFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAV 139 (342)
T ss_dssp EEEESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEE
T ss_pred EECCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccc
Confidence 4789999 9999999999999999 77765 44543 1677899999999 66 899999999999999976
Q ss_pred -CCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC-Ccee---eEeecCCCeEEEEEec-CCCEEEEEEcC
Q 008356 70 -RSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS-RRPS---SCITYEAPFSSLAFID-DDWILTAGTSN 143 (568)
Q Consensus 70 -~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt-~~~v---~~~~h~~~ItsLafsP-dg~~LasGs~D 143 (568)
.+. +..+. |...|.+++|++++ +++++.|+.|++||+++ +... ....+...|.+++|+| ++++|++++.|
T Consensus 140 ~~~~-~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d 215 (342)
T 1yfq_A 140 KNLN-SNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSID 215 (342)
T ss_dssp EESC-SSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETT
T ss_pred cCCe-eeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecC
Confidence 442 33333 88999999999877 99999999999999998 5432 2235788999999999 99999999999
Q ss_pred CeEEEEECCCC-----CCceEEEeecCC---------CCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 144 GRVVFYDIRGK-----PQPLTVLRACSS---------SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 144 G~V~VWDlrt~-----~~~v~~l~~~~h---------~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
|.|++||++.. ......+. .| ...|.+++|+|++++|+++ +.|+.|++||++
T Consensus 216 g~i~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~------------~~dg~i~vwd~~ 281 (342)
T 1yfq_A 216 GRVAVEFFDDQGDDYNSSKRFAFR--CHRLNLKDTNLAYPVNSIEFSPRHKFLYTA------------GSDGIISCWNLQ 281 (342)
T ss_dssp SEEEEEECCTTCCSTTCTTCEEEE--CCCCCTTCCSSCCCEEEEEECTTTCCEEEE------------ETTSCEEEEETT
T ss_pred CcEEEEEEcCCCcccccccceeee--cccccccccccceeEEEEEEcCCCCEEEEe------------cCCceEEEEcCc
Confidence 99999999876 35556666 44 3499999999977665554 569999999987
Q ss_pred CCCc
Q 008356 210 PSVT 213 (568)
Q Consensus 210 ~~~~ 213 (568)
....
T Consensus 282 ~~~~ 285 (342)
T 1yfq_A 282 TRKK 285 (342)
T ss_dssp TTEE
T ss_pred cHhH
Confidence 6543
No 103
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.88 E-value=6.7e-21 Score=189.04 Aligned_cols=184 Identities=12% Similarity=0.104 Sum_probs=155.1
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCCceeEEecc-CCC
Q 008356 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ-HSA 82 (568)
Q Consensus 5 dG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafsp-dg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~-H~~ 82 (568)
++++|++++.||.|++|| .++.+..+.. |...+.+++|.+ +++ ++++++.||.|++||.. . ....+.. |..
T Consensus 113 ~~~~l~~~~~d~~i~~~d--~~~~~~~~~~-~~~~v~~~~~~~~~~~-~l~~~~~d~~i~i~d~~--~-~~~~~~~~~~~ 185 (313)
T 3odt_A 113 QDGVVISGSWDKTAKVWK--EGSLVYNLQA-HNASVWDAKVVSFSEN-KFLTASADKTIKLWQND--K-VIKTFSGIHND 185 (313)
T ss_dssp ETTEEEEEETTSEEEEEE--TTEEEEEEEC-CSSCEEEEEEEETTTT-EEEEEETTSCEEEEETT--E-EEEEECSSCSS
T ss_pred cCCEEEEEeCCCCEEEEc--CCcEEEeccc-CCCceeEEEEccCCCC-EEEEEECCCCEEEEecC--c-eEEEEeccCcc
Confidence 578999999999999999 6677777776 677888899998 555 89999999999999933 2 3445555 999
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEE
Q 008356 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVL 161 (568)
Q Consensus 83 ~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l 161 (568)
.|.+++|+|++. +++++.|+.|++||+++++.+..+ .|...|.+++|+|++ .|++++.||.|++||+++.. +...+
T Consensus 186 ~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~-~~~~~ 262 (313)
T 3odt_A 186 VVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGS-LKQVI 262 (313)
T ss_dssp CEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCC-EEEEE
T ss_pred cEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCc-eeEEE
Confidence 999999999888 999999999999999999988877 589999999999999 58899999999999999874 44555
Q ss_pred eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 162 RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 162 ~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
. .|...|.+++|+|+++ +++++.|+.|++||++....
T Consensus 263 ~--~~~~~i~~~~~~~~~~-------------~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 263 T--LPAISIWSVDCMSNGD-------------IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp E--CSSSCEEEEEECTTSC-------------EEEEETTSCEEEEESCGGGC
T ss_pred e--ccCceEEEEEEccCCC-------------EEEEeCCCcEEEEeCCCCce
Confidence 5 6888999999999754 33345699999999876443
No 104
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.88 E-value=6.3e-21 Score=202.10 Aligned_cols=186 Identities=16% Similarity=0.190 Sum_probs=160.3
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~ 81 (568)
+.++|++|++|+.||.|++||+.+++.+..+.+ |...|.+++|+ ++ ++++|+.||.|++||+.+++ .+..+.+|.
T Consensus 125 ~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~--~~-~l~s~~~dg~i~vwd~~~~~-~~~~~~~h~ 199 (445)
T 2ovr_B 125 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVG-HTGGVWSSQMR--DN-IIISGSTDRTLKVWNAETGE-CIHTLYGHT 199 (445)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTCCEEEECCC-CSSCEEEEEEE--TT-EEEEEETTSCEEEEETTTTE-EEEEECCCS
T ss_pred EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcC-CCCCEEEEEec--CC-EEEEEeCCCeEEEEECCcCc-EEEEECCCC
Confidence 456799999999999999999999999999986 77788999998 33 89999999999999998876 467788999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 008356 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (568)
Q Consensus 82 ~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~ 160 (568)
..|.++.|+ ++.|++++.|+.|++||+++++.+..+ .|...|.+++| ++++|++|+.||.|++||+++.. ++..
T Consensus 200 ~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~-~~~~ 274 (445)
T 2ovr_B 200 STVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETET-CLHT 274 (445)
T ss_dssp SCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTE-EEEE
T ss_pred CcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCc-EeEE
Confidence 999999996 678999999999999999999888777 68899999999 68899999999999999998873 3444
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 161 l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
+. +|...|.+++| ++. .+++++.|+.|++||++....
T Consensus 275 ~~--~~~~~v~~~~~--~~~------------~l~~~~~d~~i~i~d~~~~~~ 311 (445)
T 2ovr_B 275 LQ--GHTNRVYSLQF--DGI------------HVVSGSLDTSIRVWDVETGNC 311 (445)
T ss_dssp EC--CCSSCEEEEEE--CSS------------EEEEEETTSCEEEEETTTCCE
T ss_pred ec--CCCCceEEEEE--CCC------------EEEEEeCCCeEEEEECCCCCE
Confidence 44 78999999998 333 455567799999999977543
No 105
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=8.6e-22 Score=217.25 Aligned_cols=196 Identities=10% Similarity=0.065 Sum_probs=142.4
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCcee----EEeeCCCCCcEEEEEEccCC-----CeEEEEEeCCCeEEEEECCCCCce
Q 008356 3 NCKDEHLASISLSGDLILHNLASGAKA----AELKDPNEQVLRVLDYSRNS-----RHLLVTAGDDGTLHLWDTTGRSPK 73 (568)
Q Consensus 3 SpdG~~LasGs~DG~V~VWDl~tg~~v----~~l~~~h~~~Vs~Lafspdg-----~~lLaTgs~DGtV~VWDl~t~~~~ 73 (568)
+|+++.|++++.|++|+|||+.+++.. ..+. +|.+.|..++|+|++ ..+|++++.||+|+|||+......
T Consensus 170 ~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~-~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~ 248 (524)
T 2j04_B 170 NEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIV-HSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATD 248 (524)
T ss_dssp ------------CEEEEEEEEETTTCCEEEEEEEE-ECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSS
T ss_pred chhhhhhccCCCCceEEEEEccCCCCCceEEEEEE-ecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccc
Confidence 345556666778999999999877643 2233 366789999999972 238999999999999999765321
Q ss_pred ----------eEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-eeeEe-ecCCCeEEE--EEecCC-CEEE
Q 008356 74 ----------VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRR-PSSCI-TYEAPFSSL--AFIDDD-WILT 138 (568)
Q Consensus 74 ----------v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~-~v~~~-~h~~~ItsL--afsPdg-~~La 138 (568)
...+.+|...|++++|+++ ..|++|+.||+|++||++++. +...+ .|...|.++ +|++++ ++|+
T Consensus 249 ~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~la 327 (524)
T 2j04_B 249 VHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVS 327 (524)
T ss_dssp SSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEE
T ss_pred cccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEE
Confidence 2467889999999999985 489999999999999999764 34434 689999999 567887 8999
Q ss_pred EEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 139 AGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 139 sGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
+|+.|++|+|||+++... ...+..+.....|.+++|+|+++.+++ ++.|+.|++||++....
T Consensus 328 S~S~D~tvklWD~~~~~~-~~~~~~~~~~~~v~~v~fsp~~~~l~s------------~~~d~tv~lwd~~~~~~ 389 (524)
T 2j04_B 328 TVAVDGYFYIFNPKDIAT-TKTTVSRFRGSNLVPVVYCPQIYSYIY------------SDGASSLRAVPSRAAFA 389 (524)
T ss_dssp EEETTSEEEEECGGGHHH-HCEEEEECSCCSCCCEEEETTTTEEEE------------ECSSSEEEEEETTCTTC
T ss_pred EeccCCeEEEEECCCCCc-ccccccccccCcccceEeCCCcCeEEE------------eCCCCcEEEEECccccc
Confidence 999999999999997643 333332112235889999997655444 45689999999987654
No 106
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.87 E-value=1.5e-21 Score=232.35 Aligned_cols=193 Identities=11% Similarity=0.159 Sum_probs=168.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|+++++++|+.+|.|++||+.+++....+.+ |...|.+++|+|+++ +|++++.||.|++||+.++. ...+..|
T Consensus 968 ~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~-h~~~v~~l~~s~dg~-~l~s~~~dg~i~vwd~~~~~--~~~~~~~ 1043 (1249)
T 3sfz_A 968 CLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVG-HKKAVRHIQFTADGK-TLISSSEDSVIQVWNWQTGD--YVFLQAH 1043 (1249)
T ss_dssp EECTTSSEEEEEETTSCCEEEETTTTSCEEECCC-CSSCCCCEEECSSSS-CEEEECSSSBEEEEETTTTE--EECCBCC
T ss_pred EEcCCCCEEEEEcCCCCEEEEEcCCCceeeeccc-CCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCCc--eEEEecC
Confidence 4789999999999999999999999998888876 777889999999998 79999999999999998876 4456789
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~ 159 (568)
...|.++.|++++ .+++++.|+.|++||+.+++.+..+ .|...|.+++|+|++++|++++.||.|++||+.+.. +..
T Consensus 1044 ~~~v~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~-~~~ 1121 (1249)
T 3sfz_A 1044 QETVKDFRLLQDS-RLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLS-PLH 1121 (1249)
T ss_dssp SSCEEEEEECSSS-EEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSS-CSB
T ss_pred CCcEEEEEEcCCC-cEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcc-eee
Confidence 9999999999855 5788999999999999999988777 588999999999999999999999999999998874 344
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
.+. +|...|++++|+|++++++++ +.|+.|++||+.....
T Consensus 1122 ~l~--~h~~~v~~~~~s~dg~~lat~------------~~dg~i~vwd~~~~~~ 1161 (1249)
T 3sfz_A 1122 ELK--GHNGCVRCSAFSLDGILLATG------------DDNGEIRIWNVSDGQL 1161 (1249)
T ss_dssp CCC--CCSSCEEEEEECSSSSEEEEE------------ETTSCCCEEESSSSCC
T ss_pred eec--cCCCcEEEEEECCCCCEEEEE------------eCCCEEEEEECCCCce
Confidence 444 799999999999977665554 5699999999876543
No 107
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.87 E-value=1.7e-20 Score=198.69 Aligned_cols=182 Identities=19% Similarity=0.311 Sum_probs=154.7
Q ss_pred CCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce--eEEeccCC
Q 008356 4 CKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK--VSWLKQHS 81 (568)
Q Consensus 4 pdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~--v~~l~~H~ 81 (568)
.++++|++|+.||.|++||+.+++.+..+.. |...|.+++|++ . ++++|+.||.|++||+...... ...+.+|.
T Consensus 181 ~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~l~~~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~ 256 (435)
T 1p22_A 181 YDERVIITGSSDSTVRVWDVNTGEMLNTLIH-HCEAVLHLRFNN--G-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHR 256 (435)
T ss_dssp CCSSEEEEEETTSCEEEEESSSCCEEEEECC-CCSCEEEEECCT--T-EEEEEETTSCEEEEECSSSSCCEEEEEECCCS
T ss_pred ECCCEEEEEcCCCeEEEEECCCCcEEEEEcC-CCCcEEEEEEcC--C-EEEEeeCCCcEEEEeCCCCCCceeeeEecCCC
Confidence 4789999999999999999999999998886 777899999974 3 7999999999999999876633 26778999
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 008356 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (568)
Q Consensus 82 ~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~ 160 (568)
..|.+++| ++++|++++.|+.|++||+++++.+..+ .|...|.+++|+ +++|++|+.||.|++||+++.. .+..
T Consensus 257 ~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~-~~~~ 331 (435)
T 1p22_A 257 AAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGA-CLRV 331 (435)
T ss_dssp SCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCC-EEEE
T ss_pred CcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCC-EEEE
Confidence 99999999 6899999999999999999999988877 588899999995 6899999999999999999873 4455
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 161 l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
+. +|...|.+++| ++.+ +++++.|+.|++||++.
T Consensus 332 ~~--~h~~~v~~~~~--~~~~------------l~sg~~dg~i~vwd~~~ 365 (435)
T 1p22_A 332 LE--GHEELVRCIRF--DNKR------------IVSGAYDGKIKVWDLVA 365 (435)
T ss_dssp EC--CCSSCEEEEEC--CSSE------------EEEEETTSCEEEEEHHH
T ss_pred Ee--CCcCcEEEEEe--cCCE------------EEEEeCCCcEEEEECCC
Confidence 54 79999999998 3333 45556688888888743
No 108
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.87 E-value=2.8e-21 Score=220.88 Aligned_cols=197 Identities=13% Similarity=0.180 Sum_probs=163.1
Q ss_pred CccCC--CCEEEEEECCCcEEEEECCCCc--eeEEeeCCCCCcEEEEEEccC--CCeEEEEEeCCCeEEEEECCCCC-ce
Q 008356 1 MYNCK--DEHLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRN--SRHLLVTAGDDGTLHLWDTTGRS-PK 73 (568)
Q Consensus 1 afSpd--G~~LasGs~DG~V~VWDl~tg~--~v~~l~~~h~~~Vs~Lafspd--g~~lLaTgs~DGtV~VWDl~t~~-~~ 73 (568)
+|+++ +++|++|+.||.|++||+.+++ .+..+.. |...|.+++|+|+ +. +|++|+.||.|++||+.... ..
T Consensus 60 ~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~-h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~ 137 (753)
T 3jro_A 60 DWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTS 137 (753)
T ss_dssp EECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCC
T ss_pred EecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccC-CCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcc
Confidence 36777 9999999999999999998886 5556654 7788999999999 76 89999999999999997763 23
Q ss_pred eEEeccCCCCeEEEEEcC-------------CCCEEEEEeCCCeEEEEECCCCc----eeeEe-ecCCCeEEEEEecC--
Q 008356 74 VSWLKQHSAPTAGISFSS-------------DDKIIASVGLDKKLYTYDPGSRR----PSSCI-TYEAPFSSLAFIDD-- 133 (568)
Q Consensus 74 v~~l~~H~~~VtslafsP-------------dg~~LaSgs~DGtV~IWDlrt~~----~v~~~-~h~~~ItsLafsPd-- 133 (568)
...+..|...|.+++|+| ++.+|++++.||.|++||++++. ....+ .|...|.+++|+|+
T Consensus 138 ~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~ 217 (753)
T 3jro_A 138 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVL 217 (753)
T ss_dssp CEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCS
T ss_pred eeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCC
Confidence 556778999999999999 58999999999999999998874 33333 58899999999999
Q ss_pred -CCEEEEEEcCCeEEEEECCCCCCce--EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 134 -DWILTAGTSNGRVVFYDIRGKPQPL--TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 134 -g~~LasGs~DG~V~VWDlrt~~~~v--~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
+++|++++.||.|++||++...... .......|...|++++|+|++++++++ +.|+.|++||+..
T Consensus 218 ~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~------------s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 218 LRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS------------GGDNKVTLWKENL 285 (753)
T ss_dssp SSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE------------CSSSCEECCBCCS
T ss_pred CCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEE------------cCCCEEEEEecCC
Confidence 8999999999999999999863221 122223588999999999987665554 5699999999985
Q ss_pred C
Q 008356 211 S 211 (568)
Q Consensus 211 ~ 211 (568)
.
T Consensus 286 ~ 286 (753)
T 3jro_A 286 E 286 (753)
T ss_dssp S
T ss_pred C
Confidence 3
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.87 E-value=5e-21 Score=208.32 Aligned_cols=188 Identities=13% Similarity=0.196 Sum_probs=155.8
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeC-CCeEEEEECCCCCceeEEeccC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD-DGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~-DGtV~VWDl~t~~~~v~~l~~H 80 (568)
|+|++.+++++ .++.+.+|++.+++.+..+. +...+.+++|+ ++ +|++++. |+.|++||+.........+..|
T Consensus 414 ~s~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~-~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~ 487 (615)
T 1pgu_A 414 ANNDGFTAVLT-NDDDLLILQSFTGDIIKSVR--LNSPGSAVSLS--QN-YVAVGLEEGNTIQVFKLSDLEVSFDLKTPL 487 (615)
T ss_dssp ECSSSEEEEEE-TTSEEEEEETTTCCEEEEEE--CSSCEEEEEEC--SS-EEEEEETTTSCEEEEETTEEEEEEECSSCC
T ss_pred EcCCCCEEEEe-CCCceEEEeccCCceeeecc--cCCCceEEEEc--CC-EEEEeecCCCeEEEEECCCccccccccCCc
Confidence 45556555544 55666666666777777776 66788999999 55 8999999 9999999998765322667789
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee--cCCCeEEEEEec----------CCCEEEEEEcCCeEEE
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT--YEAPFSSLAFID----------DDWILTAGTSNGRVVF 148 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~--h~~~ItsLafsP----------dg~~LasGs~DG~V~V 148 (568)
...|++++|+|++++|++++.|+.|++||+.+++.+..+. |...|.+++|+| ++++|++++.||.|++
T Consensus 488 ~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~i 567 (615)
T 1pgu_A 488 RAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFI 567 (615)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEE
T ss_pred cCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEE
Confidence 9999999999999999999999999999999999887773 899999999999 9999999999999999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 149 YDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 149 WDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
||++...+++..+. +|...|++++|+|+++ |++++.|+.|++||+..
T Consensus 568 w~~~~~~~~~~~~~--~h~~~v~~l~~s~~~~-------------l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 568 YSVKRPMKIIKALN--AHKDGVNNLLWETPST-------------LVSSGADACIKRWNVVL 614 (615)
T ss_dssp EESSCTTCCEEETT--SSTTCEEEEEEEETTE-------------EEEEETTSCEEEEEEC-
T ss_pred EECCCCceechhhh--cCccceEEEEEcCCCC-------------eEEecCCceEEEEeeec
Confidence 99998755555554 7999999999999644 55556799999999753
No 110
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.87 E-value=1.1e-21 Score=206.42 Aligned_cols=206 Identities=11% Similarity=0.096 Sum_probs=147.0
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEE-----eeCCCCCcEEEEEEcc--------CCCeEEEEEeCCCeEEEEECC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAE-----LKDPNEQVLRVLDYSR--------NSRHLLVTAGDDGTLHLWDTT 68 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~-----l~~~h~~~Vs~Lafsp--------dg~~lLaTgs~DGtV~VWDl~ 68 (568)
+.+++++|++++.|++|+|||+.+++.... +. +|.+.|++|+|+| +++ +|++|+.|++|+|||+.
T Consensus 97 ~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~-gH~~~v~~v~~~p~~~~~~~~d~~-~las~s~D~tv~~Wd~~ 174 (393)
T 4gq1_A 97 SPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKS-GHHNFVNDIDIADVYSADNRLAEQ-VIASVGDDCTLIIWRLT 174 (393)
T ss_dssp CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTT-SCSSCEEEEEEEEEECTTCSEEEE-EEEEEETTSEEEEEEEE
T ss_pred cCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccC-CCCCceEEEEEccccccccCCCCC-EEEEEECCCeEEEEECC
Confidence 345667899999999999999988765432 33 4788999999997 554 89999999999999997
Q ss_pred CCCceeEEeccCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEECCCCceeeE--------------------------eec
Q 008356 69 GRSPKVSWLKQHSAPTAGISFSSDD-KIIASVGLDKKLYTYDPGSRRPSSC--------------------------ITY 121 (568)
Q Consensus 69 t~~~~v~~l~~H~~~VtslafsPdg-~~LaSgs~DGtV~IWDlrt~~~v~~--------------------------~~h 121 (568)
...+ +..+..|...|.+++|+|++ ++|++++.|++|++||+++++.... ..|
T Consensus 175 ~~~~-~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~ 253 (393)
T 4gq1_A 175 DEGP-ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGI 253 (393)
T ss_dssp TTEE-EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CC
T ss_pred CCce-eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccc
Confidence 7663 55677888999999999976 5899999999999999988754321 135
Q ss_pred CCCeEEEEEe-cCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEE--------EeccCCCCe
Q 008356 122 EAPFSSLAFI-DDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFI--------DETTCKAET 192 (568)
Q Consensus 122 ~~~ItsLafs-Pdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~La--------s~s~ssd~~ 192 (568)
...+.+++|. ++++.|++++.|+.+++||+..... ...+. .|...+..+.+.++.+.+. ......++.
T Consensus 254 ~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~-~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (393)
T 4gq1_A 254 ASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANND-YNEIS--DSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDY 330 (393)
T ss_dssp SSSCSEEEEETTTTCEEEEECTTSEEEEEEC----------------------CCSCSEEEECSSCCSSCCEECSSCTTE
T ss_pred cccceeeeeecCCCCEEEEEeCCCCEEEEECccCCC-CceEe--eecCccccEEEccccccccccCcceeEEEccCCCCE
Confidence 5678889987 7999999999999999999987643 22232 5666677777766543322 111234566
Q ss_pred EEEEecCCCcEEcCCCCCCCc
Q 008356 193 ALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 193 ~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
++++++.|+.|++||+.....
T Consensus 331 ~~~sgs~Dg~V~lwd~~~~~~ 351 (393)
T 4gq1_A 331 FATAHSQHGLIQLINTYEKDS 351 (393)
T ss_dssp EEEEETTTTEEEEEETTCTTC
T ss_pred EEEEECCCCEEEEEECCCCcE
Confidence 788888999999999876543
No 111
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.87 E-value=9.2e-21 Score=198.19 Aligned_cols=174 Identities=10% Similarity=0.102 Sum_probs=129.5
Q ss_pred CCcEEEEEC-CCCceeEEeeCCCCCcEEEEEEcc---CCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC---CCeEEE
Q 008356 15 SGDLILHNL-ASGAKAAELKDPNEQVLRVLDYSR---NSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS---APTAGI 87 (568)
Q Consensus 15 DG~V~VWDl-~tg~~v~~l~~~h~~~Vs~Lafsp---dg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~---~~Vtsl 87 (568)
|+.|++|++ .+++.+..+.. |...++.++|++ +++ +|++++.|++|+|||+.+++. ++.+.+|. ..+.++
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~-~~~~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TGk~-l~tL~g~~~~v~~v~~v 232 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFL-MPPEETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTGQL-LKKMHIDDSYQASVCHK 232 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEE-CCCSSCEEEEEEEETSTT-EEEEEETTSEEEEEETTTCCE-EEEEECCC---CCCEEE
T ss_pred CCcEEEEEECCCCceeeeecc-CCCceeeEEeeccCCCCc-eEEEecCCCcEEEEECCCCcE-EEEEcCCCcceeeeEEE
Confidence 788888888 45777666665 555566777887 555 899999999999999998874 56666543 467888
Q ss_pred EEcCCCCEE------------EEEeCCCeEEEEECCCCceeeEe------ecCCCeEEEEEecCCCEEEEEEcCCeEEEE
Q 008356 88 SFSSDDKII------------ASVGLDKKLYTYDPGSRRPSSCI------TYEAPFSSLAFIDDDWILTAGTSNGRVVFY 149 (568)
Q Consensus 88 afsPdg~~L------------aSgs~DGtV~IWDlrt~~~v~~~------~h~~~ItsLafsPdg~~LasGs~DG~V~VW 149 (568)
+|+|++.++ ++|+.|++|++||..+++.+..+ +|...+.+..++ +.++++++.|++|+||
T Consensus 233 afSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIW 310 (356)
T 2w18_A 233 AYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIW 310 (356)
T ss_dssp EEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEE
T ss_pred EECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEE
Confidence 999999886 56788999999999999887654 233444444444 7899999999999999
Q ss_pred ECCCCCCceEEEeecCCCCCee-EEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCC
Q 008356 150 DIRGKPQPLTVLRACSSSEAVS-SLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (568)
Q Consensus 150 Dlrt~~~~v~~l~~~~h~~~Vt-sLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDl 208 (568)
|+++++ .+..+. +|...+. .++|+|+|++|+++ +.|++|+|||+
T Consensus 311 Dl~tGk-~l~tL~--gH~~~vvs~vafSPDG~~LaSG------------S~D~TIklWd~ 355 (356)
T 2w18_A 311 DLLLGQ-CTALLP--PVSDQHWSFVKWSGTDSHLLAG------------QKDGNIFVYHY 355 (356)
T ss_dssp ETTTCS-EEEEEC--CC--CCCCEEEECSSSSEEEEE------------CTTSCEEEEEE
T ss_pred ECCCCc-EEEEec--CCCCCeEEEEEECCCCCEEEEE------------ECCCcEEEecC
Confidence 999884 455555 6776655 68999977665554 66999999985
No 112
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.87 E-value=1.9e-21 Score=204.70 Aligned_cols=177 Identities=12% Similarity=0.116 Sum_probs=129.8
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee----------
Q 008356 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV---------- 74 (568)
Q Consensus 5 dG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v---------- 74 (568)
|+++||+|+.|++|+|||+.++..+..+.. |...+.+++|+|++.++|++|+.|++|++||+.+++...
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~ 233 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYP-LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKN 233 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEE-CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSC
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecC-CCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCccc
Confidence 789999999999999999988887777776 556678899999987789999999999999997654211
Q ss_pred --------------EEeccCCCCeEEEEEc-CCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCC--------------
Q 008356 75 --------------SWLKQHSAPTAGISFS-SDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAP-------------- 124 (568)
Q Consensus 75 --------------~~l~~H~~~Vtslafs-Pdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~-------------- 124 (568)
....+|...|.++.|. ++++.|++++.|+++++||+..++....+ .+...
T Consensus 234 ~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 313 (393)
T 4gq1_A 234 PWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGIS 313 (393)
T ss_dssp CCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEEC
T ss_pred ceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccc
Confidence 1134678889999997 59999999999999999999876544333 12222
Q ss_pred ----eEEEEEec--CCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 008356 125 ----FSSLAFID--DDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 125 ----ItsLafsP--dg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~ 185 (568)
...+.|++ ++.++++|+.||.|+|||+........ +. .|..+|++++|+|+|++|+++
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~-~~--~~~~~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 314 LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSI-PI--QLGMPIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEE-EE--ECSSCEEEEEECTTSSEEEEE
T ss_pred ccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEE-ec--CCCCcEEEEEEcCCCCEEEEE
Confidence 22233444 344667788899999999998754433 33 578899999999998887776
No 113
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.86 E-value=1e-20 Score=196.27 Aligned_cols=192 Identities=12% Similarity=0.131 Sum_probs=146.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|+|||++|++|+.+| ++|||+.+++....... . .+..+++.++++.++++++.|++|++||+.+++. +..+. |
T Consensus 26 ~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~-~~~~~-~ 99 (355)
T 3vu4_A 26 EFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--R-HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQD-VSRIK-V 99 (355)
T ss_dssp EECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--S-CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEE-EEEEE-C
T ss_pred EECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--C-CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcE-EEEEE-C
Confidence 4899999999998775 78999987776655442 2 3666888888875557888899999999988763 33343 6
Q ss_pred CCCeEEEEEcCCC-----------------------------------CEEEE--EeCCCeEEEEECCCCc---------
Q 008356 81 SAPTAGISFSSDD-----------------------------------KIIAS--VGLDKKLYTYDPGSRR--------- 114 (568)
Q Consensus 81 ~~~VtslafsPdg-----------------------------------~~LaS--gs~DGtV~IWDlrt~~--------- 114 (568)
...|.+++|+++. .+++. ++.||.|++||+++++
T Consensus 100 ~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~ 179 (355)
T 3vu4_A 100 DAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGV 179 (355)
T ss_dssp SSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-----------
T ss_pred CCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccc
Confidence 6688888887642 23444 4788899999998765
Q ss_pred ------e-eeEe-ecCCCeEEEEEecCCCEEEEEEcCCe-EEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 008356 115 ------P-SSCI-TYEAPFSSLAFIDDDWILTAGTSNGR-VVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 115 ------~-v~~~-~h~~~ItsLafsPdg~~LasGs~DG~-V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~ 185 (568)
+ +..+ .|...|.+++|+|++++|++|+.|++ |+|||+++.. .+..+....|...|.+++|+|++++|+++
T Consensus 180 ~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~-~~~~~~~g~h~~~v~~~~~s~~~~~l~s~ 258 (355)
T 3vu4_A 180 QQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV-LVREFRRGLDRADVVDMKWSTDGSKLAVV 258 (355)
T ss_dssp -------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC-EEEEEECTTCCSCEEEEEECTTSCEEEEE
T ss_pred cccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc-EEEEEEcCCCCCcEEEEEECCCCCEEEEE
Confidence 1 3334 79999999999999999999999998 9999999874 33444311288999999999976665554
Q ss_pred ccCCCCeEEEEecCCCcEEcCCCCCC
Q 008356 186 TTCKAETALLGGAVGDSILMPDPLPS 211 (568)
Q Consensus 186 s~ssd~~~Lls~s~Dg~V~VWDlr~~ 211 (568)
+.|+.|++||++..
T Consensus 259 ------------s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 259 ------------SDKWTLHVFEIFND 272 (355)
T ss_dssp ------------ETTCEEEEEESSCC
T ss_pred ------------ECCCEEEEEEccCC
Confidence 66999999999764
No 114
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.86 E-value=5.5e-20 Score=190.83 Aligned_cols=197 Identities=11% Similarity=0.098 Sum_probs=146.5
Q ss_pred ccCCCCEE-EEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCC------------------------------
Q 008356 2 YNCKDEHL-ASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSR------------------------------ 50 (568)
Q Consensus 2 fSpdG~~L-asGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~------------------------------ 50 (568)
|.++++.+ ++++.|+.|+|||+.+++.+..+. +...|.+++|+++.-
T Consensus 66 ~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~--~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~ 143 (355)
T 3vu4_A 66 MLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK--VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVC 143 (355)
T ss_dssp ECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE--CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEE
T ss_pred EcCCCCEEEEEECCccEEEEEECCCCcEEEEEE--CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceE
Confidence 45666766 567778999999999999888887 445677788876420
Q ss_pred ----eEEEE--EeCCCeEEEEECCCCC---------------ceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCe-EEEE
Q 008356 51 ----HLLVT--AGDDGTLHLWDTTGRS---------------PKVSWLKQHSAPTAGISFSSDDKIIASVGLDKK-LYTY 108 (568)
Q Consensus 51 ----~lLaT--gs~DGtV~VWDl~t~~---------------~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGt-V~IW 108 (568)
.+++. |+.||.|++||+.... +.+..+.+|...|++++|+|++++|++++.|++ |++|
T Consensus 144 ~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iw 223 (355)
T 3vu4_A 144 EFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVF 223 (355)
T ss_dssp EEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEE
T ss_pred EEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 12333 5788889999987643 015678899999999999999999999999998 9999
Q ss_pred ECCCCceeeEee---cCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCc-eEEEee------c-------------C
Q 008356 109 DPGSRRPSSCIT---YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP-LTVLRA------C-------------S 165 (568)
Q Consensus 109 Dlrt~~~v~~~~---h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~-v~~l~~------~-------------~ 165 (568)
|+++++++..+. |...|.+++|+|++++|++++.|+.|+|||++..... ...+.. + .
T Consensus 224 d~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (355)
T 3vu4_A 224 KTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVD 303 (355)
T ss_dssp ETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCC
T ss_pred ECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccC
Confidence 999999998885 8999999999999999999999999999999764211 111100 0 0
Q ss_pred CCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 166 SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 166 h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
+......++|+++ +..++.++.|+.+++|++....
T Consensus 304 ~~~~~~~~a~~~d------------~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 304 KHVRGCKIAWISE------------SSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp TTCCCCEEEESSS------------SEEEEEETTTTEEEEEEEEEET
T ss_pred CCCCceEEEEeCC------------CCEEEEEeCCCeEEEEEEEcCC
Confidence 1112244556554 4455556679999999876543
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.3e-20 Score=205.14 Aligned_cols=184 Identities=12% Similarity=0.154 Sum_probs=147.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCC----CcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc----
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNE----QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP---- 72 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~----~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~---- 72 (568)
+|+|+|++||+++.||.|+|||.+. ++..+. ++. ..+.+++|+|+|+ +|++|++||+|+|||+.++..
T Consensus 92 awSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~-~LAsgs~DGtVkIWd~~~~~l~~~~ 167 (588)
T 2j04_A 92 KPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIES-SIVVGNEDGELQFFSIRKNSENTPE 167 (588)
T ss_dssp EECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSS-CEEEEETTSEEEEEECCCCTTTCCC
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCC-EEEEEcCCCEEEEEECCCCcccccc
Confidence 5999999999999999999999643 555665 442 2699999999998 899999999999999988752
Q ss_pred --eeEEe----ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCcee---eEe--ecCCCeEEEEEecCCCEEEEEE
Q 008356 73 --KVSWL----KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS---SCI--TYEAPFSSLAFIDDDWILTAGT 141 (568)
Q Consensus 73 --~v~~l----~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v---~~~--~h~~~ItsLafsPdg~~LasGs 141 (568)
.+..+ .+|...|.+++|+|++ +++++.|+.|++||+.+++.. ..+ .|...|.+++|+ +++||+++
T Consensus 168 ~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~ 243 (588)
T 2j04_A 168 FYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC 243 (588)
T ss_dssp CEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC
T ss_pred ceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe
Confidence 24555 6788899999999999 888999999999999887743 344 477889999999 68999887
Q ss_pred cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEE--ccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 142 SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCW--QRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 142 ~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLaf--spdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
++.|++||+.+... ..+. .+|...|..+.| +|++..++.+ ..||+ ++|...
T Consensus 244 -~~tIkLWd~~~~~~--~~~~-~gh~~~V~~va~~~s~d~~~La~a------------~edG~-klw~~d 296 (588)
T 2j04_A 244 -PGYVHKIDLKNYSI--SSLK-TGSLENFHIIPLNHEKESTILLMS------------NKTSY-KVLLED 296 (588)
T ss_dssp -SSEEEEEETTTTEE--EEEE-CSCCSCCCEEEETTCSSCEEEEEC------------SSCEE-EEEESS
T ss_pred -CCeEEEEECCCCeE--EEEE-cCCCceEEEEEeeeCCCCCEEEEE------------cCCCC-EEEeec
Confidence 69999999998631 1222 379999999999 8876555554 44666 666654
No 116
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.85 E-value=3.4e-20 Score=187.49 Aligned_cols=134 Identities=14% Similarity=0.259 Sum_probs=116.6
Q ss_pred EECCCCceeEEeeCCCCCcEEEEEEccCC--CeEEEEEeCCCeEEEEECCC-CCceeEEeccCCCCeEEEEEcCCCCEEE
Q 008356 21 HNLASGAKAAELKDPNEQVLRVLDYSRNS--RHLLVTAGDDGTLHLWDTTG-RSPKVSWLKQHSAPTAGISFSSDDKIIA 97 (568)
Q Consensus 21 WDl~tg~~v~~l~~~h~~~Vs~Lafspdg--~~lLaTgs~DGtV~VWDl~t-~~~~v~~l~~H~~~VtslafsPdg~~La 97 (568)
++....+.+..+.+ |...|.+++|+|++ ..+|++|+.||.|+|||+.+ .......+..|...|++++|+|++++|+
T Consensus 24 ~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~ 102 (368)
T 3mmy_A 24 DNHNPMKDIEVTSS-PDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVF 102 (368)
T ss_dssp CSSCTTCCEECSSC-CSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred CCCCCcceeEeccC-CCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEE
Confidence 34444555555554 78899999999995 34899999999999999987 4444477889999999999999999999
Q ss_pred EEeCCCeEEEEECCCCceeeEeecCCCeEEEEE--ecCCCEEEEEEcCCeEEEEECCCCC
Q 008356 98 SVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAF--IDDDWILTAGTSNGRVVFYDIRGKP 155 (568)
Q Consensus 98 Sgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLaf--sPdg~~LasGs~DG~V~VWDlrt~~ 155 (568)
+++.|+.|++||+++++.+....|...|.+++| ++++++|++++.||.|++||+++..
T Consensus 103 s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred EEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 999999999999999998888899999999999 8899999999999999999998653
No 117
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.85 E-value=5.9e-20 Score=182.86 Aligned_cols=120 Identities=16% Similarity=0.260 Sum_probs=105.5
Q ss_pred CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc---eeEEeccCCCCeEEEEEcC--CCCEEEEEeCCCeEEEEE
Q 008356 35 PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP---KVSWLKQHSAPTAGISFSS--DDKIIASVGLDKKLYTYD 109 (568)
Q Consensus 35 ~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~---~v~~l~~H~~~VtslafsP--dg~~LaSgs~DGtV~IWD 109 (568)
.|...|.+++|+|+++ +|++|+.||.|++||+..... ....+..|...|++++|+| ++++|++++.|+.|++||
T Consensus 9 gH~~~v~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGR-HVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CCSSCEEEEEECSSSS-EEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred ccccceeEEEEcCCCC-EEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 4888999999999998 899999999999999986542 3556778999999999999 699999999999999999
Q ss_pred CCCC---------ceeeEe-ecCCCeEEEEEecC--CCEEEEEEcCCeEEEEECCCCC
Q 008356 110 PGSR---------RPSSCI-TYEAPFSSLAFIDD--DWILTAGTSNGRVVFYDIRGKP 155 (568)
Q Consensus 110 lrt~---------~~v~~~-~h~~~ItsLafsPd--g~~LasGs~DG~V~VWDlrt~~ 155 (568)
++++ +.+..+ .|...|.+++|+|+ +.+|++++.||.|++||++...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 9886 334444 68899999999999 9999999999999999998653
No 118
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.85 E-value=6.2e-20 Score=192.26 Aligned_cols=195 Identities=8% Similarity=0.047 Sum_probs=159.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeC----CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKD----PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~----~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~ 76 (568)
+|+|++.++++++.++.|++||+.+++.+..+.. .|...|.+++|++++. ++++++.|+.|++||+.+.+. +..
T Consensus 129 ~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~s~~~d~~v~~~d~~~~~~-~~~ 206 (433)
T 3bws_A 129 RFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNE-LWVSQMQANAVHVFDLKTLAY-KAT 206 (433)
T ss_dssp EESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTE-EEEEEGGGTEEEEEETTTCCE-EEE
T ss_pred EEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCE-EEEEECCCCEEEEEECCCceE-EEE
Confidence 3788677777788889999999999988764321 3667899999999886 899999999999999988763 566
Q ss_pred eccCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEE--------cCCeEE
Q 008356 77 LKQHSAPTAGISFSSDDKIIASV-GLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGT--------SNGRVV 147 (568)
Q Consensus 77 l~~H~~~VtslafsPdg~~LaSg-s~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs--------~DG~V~ 147 (568)
+..|...+.+++|+|++++++++ +.|+.|++||+++++.+..+.....+.+++|+|++++|++++ .|+.|+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~ 286 (433)
T 3bws_A 207 VDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLG 286 (433)
T ss_dssp EECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEE
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEE
Confidence 77899999999999999988554 489999999999999888887777899999999999999988 488999
Q ss_pred EEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 148 FYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 148 VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
+||+++.+ ....+ .|...+.+++|+|++++ +++++..|+.|++||+....
T Consensus 287 ~~d~~~~~-~~~~~---~~~~~~~~~~~~~~g~~-----------l~~~~~~~~~v~v~d~~~~~ 336 (433)
T 3bws_A 287 IYSMDKEK-LIDTI---GPPGNKRHIVSGNTENK-----------IYVSDMCCSKIEVYDLKEKK 336 (433)
T ss_dssp EEETTTTE-EEEEE---EEEECEEEEEECSSTTE-----------EEEEETTTTEEEEEETTTTE
T ss_pred EEECCCCc-EEeec---cCCCCcceEEECCCCCE-----------EEEEecCCCEEEEEECCCCc
Confidence 99999763 23333 45668899999997544 34455669999999987544
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.84 E-value=1.8e-19 Score=186.17 Aligned_cols=195 Identities=14% Similarity=0.115 Sum_probs=157.0
Q ss_pred CccCCCCEE-EEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 008356 1 MYNCKDEHL-ASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (568)
Q Consensus 1 afSpdG~~L-asGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~ 79 (568)
+|+|++++| ++++.|+.|++||+.+++.+..+..++ .+.+++|+|+++.+++++..++.|++||+.+++. +..+.
T Consensus 38 ~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~-~~~~~- 113 (391)
T 1l0q_A 38 VISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS--SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTV-AGTVK- 113 (391)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEE-
T ss_pred EECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC--CccceEECCCCCEEEEEECCCCEEEEEECCCCeE-EEEEe-
Confidence 488999987 566689999999999999988887533 7899999999986667777889999999988763 34444
Q ss_pred CCCCeEEEEEcCCCCEE-EEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEE-EEEEcCCeEEEEECCCCCCc
Q 008356 80 HSAPTAGISFSSDDKII-ASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWIL-TAGTSNGRVVFYDIRGKPQP 157 (568)
Q Consensus 80 H~~~VtslafsPdg~~L-aSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~L-asGs~DG~V~VWDlrt~~~~ 157 (568)
+...+.+++|+|++++| ++++.|+.|++||+++++.+..+.....+.+++|+|++++| +++..++.|++||+++.. .
T Consensus 114 ~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~-~ 192 (391)
T 1l0q_A 114 TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNS-V 192 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTE-E
T ss_pred CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCe-E
Confidence 44568999999999977 68888999999999999988888777888999999999887 567788999999999873 3
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 158 LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 158 v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
...+ .+...+.+++|+|++++++.+.. ...++.|++||++...
T Consensus 193 ~~~~---~~~~~~~~~~~~~~g~~l~~~~~---------~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 193 IDTV---KVEAAPSGIAVNPEGTKAYVTNV---------DKYFNTVSMIDTGTNK 235 (391)
T ss_dssp EEEE---ECSSEEEEEEECTTSSEEEEEEE---------CSSCCEEEEEETTTTE
T ss_pred EEEE---ecCCCccceEECCCCCEEEEEec---------CcCCCcEEEEECCCCe
Confidence 3333 35678999999998776655411 0158999999987654
No 120
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.84 E-value=1.9e-20 Score=206.95 Aligned_cols=187 Identities=11% Similarity=0.054 Sum_probs=145.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc-----------------------------eeEEeeCCCCCcEEEEEEccCCCe
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGA-----------------------------KAAELKDPNEQVLRVLDYSRNSRH 51 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~-----------------------------~v~~l~~~h~~~Vs~Lafspdg~~ 51 (568)
+|+|||+++|+++.|++|+ |...++ ....+...+.+.|.+++|+|+|.
T Consensus 22 ~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~- 98 (588)
T 2j04_A 22 TWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDD- 98 (588)
T ss_dssp EECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSS-
T ss_pred EECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCCC-
Confidence 5899999999999999995 433332 11122213467899999999998
Q ss_pred EEEEEeCCCeEEEEECCCCCceeEEeccCCC-----CeEEEEEcCCCCEEEEEeCCCeEEEEECCCCce-------eeEe
Q 008356 52 LLVTAGDDGTLHLWDTTGRSPKVSWLKQHSA-----PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP-------SSCI 119 (568)
Q Consensus 52 lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~-----~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~-------v~~~ 119 (568)
+|++++.||.|++||..+ .+..+. |.. .|.+++|+||+++|++|+.||+|++||+.++.. +..+
T Consensus 99 ~LAs~s~dg~V~iwd~~~---~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti 174 (588)
T 2j04_A 99 WMAVLSNNGNVSVFKDNK---MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSI 174 (588)
T ss_dssp CEEEEETTSCEEEEETTE---EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEE
T ss_pred EEEEEeCCCcEEEEeCCc---eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeee
Confidence 899999999999999654 355556 665 499999999999999999999999999998753 3443
Q ss_pred -----ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCC--ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCe
Q 008356 120 -----TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ--PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAET 192 (568)
Q Consensus 120 -----~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~--~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~ 192 (568)
+|...|.+++|+|+| +++++.|+.|++||+.+... ....+. .+|...|.+++|+ +++|+++
T Consensus 175 ~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~-~~h~~~V~svaFs--g~~LASa------- 242 (588)
T 2j04_A 175 RLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQ-NASRRKITDLKIV--DYKVVLT------- 242 (588)
T ss_dssp ECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEE-CCCSSCCCCEEEE--TTEEEEE-------
T ss_pred ecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeec-ccccCcEEEEEEE--CCEEEEE-------
Confidence 356799999999999 88899999999999988753 123342 2688899999998 4444433
Q ss_pred EEEEecCCCcEEcCCCCCCC
Q 008356 193 ALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 193 ~Lls~s~Dg~V~VWDlr~~~ 212 (568)
+ ++.|++||+....
T Consensus 243 -----~-~~tIkLWd~~~~~ 256 (588)
T 2j04_A 243 -----C-PGYVHKIDLKNYS 256 (588)
T ss_dssp -----C-SSEEEEEETTTTE
T ss_pred -----e-CCeEEEEECCCCe
Confidence 4 6899999987644
No 121
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2.7e-20 Score=217.51 Aligned_cols=208 Identities=15% Similarity=0.147 Sum_probs=155.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCcee----EEee------CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKA----AELK------DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR 70 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v----~~l~------~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~ 70 (568)
+|+|++++|++|+.||+|++||+.++... ..+. ..|...|.+|+|+|+++ +|++|+.||+|+|||+.+.
T Consensus 442 ~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~-~LAsgs~DgtV~lwd~~~~ 520 (902)
T 2oaj_A 442 LPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETL-ELAVSIETGDVVLFKYEVN 520 (902)
T ss_dssp CCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTT-EEEEEETTSCEEEEEEEEC
T ss_pred cccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCC-eEEEEecCcEEEEEEecCc
Confidence 47899999999999999999999877421 1111 13677899999999998 8999999999999999755
Q ss_pred C--------------------------------------------ceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEE
Q 008356 71 S--------------------------------------------PKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLY 106 (568)
Q Consensus 71 ~--------------------------------------------~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~ 106 (568)
+ ..+..+.+|.+.|++++|+|+| +|++|+.|++|+
T Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~ 599 (902)
T 2oaj_A 521 QFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLM 599 (902)
T ss_dssp CC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEE
T ss_pred cccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEE
Confidence 2 1245678899999999999999 999999999999
Q ss_pred EEECCCCceeeE-----e--ecCCCeEEEEEe-----cCC---CEEEEEEcCCeEEEEEC---CCCCCceEEEee---cC
Q 008356 107 TYDPGSRRPSSC-----I--TYEAPFSSLAFI-----DDD---WILTAGTSNGRVVFYDI---RGKPQPLTVLRA---CS 165 (568)
Q Consensus 107 IWDlrt~~~v~~-----~--~h~~~ItsLafs-----Pdg---~~LasGs~DG~V~VWDl---rt~~~~v~~l~~---~~ 165 (568)
+||++++..+.. + .|...|++++|+ ||| .+|++|+.|++|++||+ .++. ....+.. ..
T Consensus 600 lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~-~~~~~~~~~~~~ 678 (902)
T 2oaj_A 600 LIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGK-FDVQLMDITNVT 678 (902)
T ss_dssp EEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGC-EEEEEEEEEECC
T ss_pred EEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCc-EEEEecCceecC
Confidence 999988766531 2 577889999999 885 89999999999999999 4543 2233331 12
Q ss_pred CCCCeeEEE-EccCCCeEEEe----------ccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 166 SSEAVSSLC-WQRAKPVFIDE----------TTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 166 h~~~VtsLa-fspdg~~Las~----------s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
|.++|..++ |+.+....+.. +...++ +++.++ +..|++|++.....
T Consensus 679 ~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~-~~l~~~-~~~ir~~~~~~~k~ 735 (902)
T 2oaj_A 679 SKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPG-IVLITG-FDDIRLITLGKSKS 735 (902)
T ss_dssp SSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCE-EEEEEC-SSEEEEECTTCCCE
T ss_pred CCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCe-EEEEEe-ccceEEEeCccccc
Confidence 457888777 66332221111 011233 344444 88999999876443
No 122
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.84 E-value=3.3e-19 Score=188.88 Aligned_cols=183 Identities=18% Similarity=0.264 Sum_probs=157.6
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCe
Q 008356 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPT 84 (568)
Q Consensus 5 dG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~V 84 (568)
++++|++|+.||.|++||+.+++.+..+.+ |...|.+++|++ + ++++|+.||.|++||+.+++ .+..+..|...|
T Consensus 168 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-h~~~v~~~~~~~--~-~l~s~s~dg~i~~wd~~~~~-~~~~~~~~~~~v 242 (445)
T 2ovr_B 168 RDNIIISGSTDRTLKVWNAETGECIHTLYG-HTSTVRCMHLHE--K-RVVSGSRDATLRVWDIETGQ-CLHVLMGHVAAV 242 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTTEEEEEECC-CSSCEEEEEEET--T-EEEEEETTSEEEEEESSSCC-EEEEEECCSSCE
T ss_pred cCCEEEEEeCCCeEEEEECCcCcEEEEECC-CCCcEEEEEecC--C-EEEEEeCCCEEEEEECCCCc-EEEEEcCCcccE
Confidence 367999999999999999999999988886 777889999963 3 79999999999999998877 467788999999
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEee
Q 008356 85 AGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRA 163 (568)
Q Consensus 85 tslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~ 163 (568)
.++.| ++++|++++.|+.|++||+++++++..+ .|...|.+++| ++.+|++++.||.|++||+++.. .+..+.
T Consensus 243 ~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~- 316 (445)
T 2ovr_B 243 RCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN-CIHTLT- 316 (445)
T ss_dssp EEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC-EEEEEC-
T ss_pred EEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC-EEEEEc-
Confidence 99999 6889999999999999999999888877 58889999999 78999999999999999999874 444444
Q ss_pred cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 164 CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 164 ~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
+|...+.++.+++ .++++++.|+.|++||++....
T Consensus 317 -~~~~~v~~~~~~~--------------~~l~~~~~dg~i~vwd~~~~~~ 351 (445)
T 2ovr_B 317 -GHQSLTSGMELKD--------------NILVSGNADSTVKIWDIKTGQC 351 (445)
T ss_dssp -CCCSCEEEEEEET--------------TEEEEEETTSCEEEEETTTCCE
T ss_pred -CCcccEEEEEEeC--------------CEEEEEeCCCeEEEEECCCCcE
Confidence 7888999888753 2566667799999999976543
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.84 E-value=4.9e-19 Score=182.85 Aligned_cols=198 Identities=13% Similarity=0.091 Sum_probs=159.2
Q ss_pred CccCCCCEEEEEE-CCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 008356 1 MYNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (568)
Q Consensus 1 afSpdG~~LasGs-~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~ 79 (568)
+|+|++++|++++ .++.|++||+.+++.+..+.. ...+.+++|+++++.++++++.|+.|++||+.+++. +..+..
T Consensus 80 ~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~-~~~~~~ 156 (391)
T 1l0q_A 80 AVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV-INTVSV 156 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEEC
T ss_pred EECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE-EEEEec
Confidence 4899999886655 569999999999998888774 345788999999986668888999999999988763 444444
Q ss_pred CCCCeEEEEEcCCCCEE-EEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEE---cCCeEEEEECCCCC
Q 008356 80 HSAPTAGISFSSDDKII-ASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGT---SNGRVVFYDIRGKP 155 (568)
Q Consensus 80 H~~~VtslafsPdg~~L-aSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs---~DG~V~VWDlrt~~ 155 (568)
| ..+.+++|+|++++| ++++.|+.|++||+++++.+..+.+...+.+++|+|++++|++++ .++.|++||+++.+
T Consensus 157 ~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~ 235 (391)
T 1l0q_A 157 G-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK 235 (391)
T ss_dssp C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE
T ss_pred C-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe
Confidence 4 557999999999887 677889999999999999888888888999999999999999988 68999999998873
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCccccc
Q 008356 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSSV 217 (568)
Q Consensus 156 ~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~~s~ 217 (568)
.+..+. .| ..+.+++|+|+++++ +++++.|+.|++||+........+
T Consensus 236 -~~~~~~--~~-~~~~~~~~s~dg~~l-----------~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 236 -ITARIP--VG-PDPAGIAVTPDGKKV-----------YVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp -EEEEEE--CC-SSEEEEEECTTSSEE-----------EEEETTTTEEEEEETTTTEEEEEE
T ss_pred -EEEEEe--cC-CCccEEEEccCCCEE-----------EEEcCCCCEEEEEECCCCcEEEEE
Confidence 344444 33 457899999976554 344566999999999876544433
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.84 E-value=9.8e-20 Score=190.71 Aligned_cols=205 Identities=11% Similarity=0.068 Sum_probs=166.5
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~ 81 (568)
|+++++++++++.|+.|++||+.+++.+..+.. +...+.+++|+++++.+++++..|+.|++||+.+++. +..+.. .
T Consensus 177 ~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~-~ 253 (433)
T 3bws_A 177 IPEHNELWVSQMQANAVHVFDLKTLAYKATVDL-TGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE-IRKTDK-I 253 (433)
T ss_dssp EGGGTEEEEEEGGGTEEEEEETTTCCEEEEEEC-SSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE-EEECCC-C
T ss_pred EcCCCEEEEEECCCCEEEEEECCCceEEEEEcC-CCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE-EEEecC-C
Confidence 678899999999999999999999998888875 6678899999999986556777899999999987763 444444 4
Q ss_pred CCeEEEEEcCCCCEEEEEe--------CCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEE-EEEEcCCeEEEEECC
Q 008356 82 APTAGISFSSDDKIIASVG--------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWIL-TAGTSNGRVVFYDIR 152 (568)
Q Consensus 82 ~~VtslafsPdg~~LaSgs--------~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~L-asGs~DG~V~VWDlr 152 (568)
..+.+++|+|++++|++++ .|+.|++||+++++.+..+.+...+.+++|+|+++.+ ++++.|+.|++||++
T Consensus 254 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~ 333 (433)
T 3bws_A 254 GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLK 333 (433)
T ss_dssp SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECC
Confidence 5599999999999999888 5889999999999888888777899999999999755 556889999999999
Q ss_pred CCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCC---CeEEEEecCCCcEEcCCCCCCCc
Q 008356 153 GKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKA---ETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 153 t~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd---~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
+.+ ....+ .+...+.+++|+|++++++++....+ ..++++++.|+.|++||+.....
T Consensus 334 ~~~-~~~~~---~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~ 393 (433)
T 3bws_A 334 EKK-VQKSI---PVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV 393 (433)
T ss_dssp TTE-EEEEE---ECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE
T ss_pred CCc-EEEEe---cCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcE
Confidence 763 33333 36788999999999998877643222 23556667789999999876443
No 125
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.83 E-value=1e-19 Score=189.95 Aligned_cols=152 Identities=9% Similarity=0.070 Sum_probs=129.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEE-eeCCCCCcEEEEEEccCCCeEEEEEeCCC----eEEEEECCCCCce--
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAE-LKDPNEQVLRVLDYSRNSRHLLVTAGDDG----TLHLWDTTGRSPK-- 73 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~-l~~~h~~~Vs~Lafspdg~~lLaTgs~DG----tV~VWDl~t~~~~-- 73 (568)
+|+|||++|++++.+ .+++|+..+++.+.. ....|...|++++|+|+++ ++++++.|+ .+++||+......
T Consensus 183 ~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~ 260 (365)
T 4h5i_A 183 HFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT-VLIAASLKKGKGIVLTKISIKSGNTSVL 260 (365)
T ss_dssp EECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEEEE
T ss_pred EEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC-EEEEEecCCcceeEEeecccccceecce
Confidence 489999999999854 577777777776543 3444778899999999997 788888776 6888998665422
Q ss_pred -eEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe--ecCCCeEEEEEecCCCEEEEEEcCCeEEEEE
Q 008356 74 -VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYD 150 (568)
Q Consensus 74 -v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~--~h~~~ItsLafsPdg~~LasGs~DG~V~VWD 150 (568)
...+..|...|++++|+|++++|++|+.|++|+|||+++++++..+ .|...|++++|+|||++|++|+.|++|+|||
T Consensus 261 ~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 261 RSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIK 340 (365)
T ss_dssp EEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEE
T ss_pred eeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 3457789999999999999999999999999999999999988775 5999999999999999999999999999999
Q ss_pred CCCC
Q 008356 151 IRGK 154 (568)
Q Consensus 151 lrt~ 154 (568)
+...
T Consensus 341 ip~~ 344 (365)
T 4h5i_A 341 LPLN 344 (365)
T ss_dssp CCTT
T ss_pred cCCC
Confidence 9654
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.79 E-value=1.5e-17 Score=176.74 Aligned_cols=189 Identities=13% Similarity=0.139 Sum_probs=149.7
Q ss_pred CccCCCCEEEEEECCC---cEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCe--EEEEECCCCCceeE
Q 008356 1 MYNCKDEHLASISLSG---DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT--LHLWDTTGRSPKVS 75 (568)
Q Consensus 1 afSpdG~~LasGs~DG---~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGt--V~VWDl~t~~~~v~ 75 (568)
+|+|||++|++++.++ .|++||+.+++... +.. +...+.+++|+|+++.++++++.|+. |++||+.+++ ..
T Consensus 185 ~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l~~-~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~--~~ 260 (415)
T 2hqs_A 185 AWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VAS-FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ--IR 260 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EEC-CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC--EE
T ss_pred EEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-eec-CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC--EE
Confidence 4899999999999875 99999999888753 443 56678999999999965557777665 9999998876 46
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeC-CC--eEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcC---CeEEEE
Q 008356 76 WLKQHSAPTAGISFSSDDKIIASVGL-DK--KLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSN---GRVVFY 149 (568)
Q Consensus 76 ~l~~H~~~VtslafsPdg~~LaSgs~-DG--tV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~D---G~V~VW 149 (568)
.+..|...+.+++|+|++++|++++. ++ .|++||+.+++......+...+.+++|+|+|++|++++.+ ..|++|
T Consensus 261 ~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~ 340 (415)
T 2hqs_A 261 QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQ 340 (415)
T ss_dssp ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEE
T ss_pred eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEE
Confidence 77888899999999999999988886 44 7888899988765544567788999999999999988864 589999
Q ss_pred ECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCC--cEEcCCCC
Q 008356 150 DIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD--SILMPDPL 209 (568)
Q Consensus 150 Dlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg--~V~VWDlr 209 (568)
|+.+... ..+. .|. .+.+++|+|+|++|+.++. .++ .|++||+.
T Consensus 341 d~~~~~~--~~l~--~~~-~~~~~~~spdg~~l~~~s~-----------~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 341 DLATGGV--QVLS--STF-LDETPSLAPNGTMVIYSSS-----------QGMGSVLNLVSTD 386 (415)
T ss_dssp ETTTCCE--EECC--CSS-SCEEEEECTTSSEEEEEEE-----------ETTEEEEEEEETT
T ss_pred ECCCCCE--EEec--CCC-CcCCeEEcCCCCEEEEEEc-----------CCCccEEEEEECC
Confidence 9998742 3333 343 8999999999887766522 122 68888874
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.78 E-value=3.1e-18 Score=179.15 Aligned_cols=147 Identities=12% Similarity=0.116 Sum_probs=115.6
Q ss_pred ccC---CCCEEEEEECCCcEEEEECCCCceeEEeeCCCC--CcEEEEEEccCCCeE-----------EEEEeCCCeEEEE
Q 008356 2 YNC---KDEHLASISLSGDLILHNLASGAKAAELKDPNE--QVLRVLDYSRNSRHL-----------LVTAGDDGTLHLW 65 (568)
Q Consensus 2 fSp---dG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~--~~Vs~Lafspdg~~l-----------LaTgs~DGtV~VW 65 (568)
|++ ++++|++++.|++|+|||+.+++++..+.+++. ..+.+++|+|++..+ +++|+.|++|++|
T Consensus 186 fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW 265 (356)
T 2w18_A 186 FAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI 265 (356)
T ss_dssp EEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEE
T ss_pred eeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence 455 668899999999999999999999999987543 467778999998732 2678899999999
Q ss_pred ECCCCCceeEEe-----ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee-cCCCe-EEEEEecCCCEEE
Q 008356 66 DTTGRSPKVSWL-----KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPF-SSLAFIDDDWILT 138 (568)
Q Consensus 66 Dl~t~~~~v~~l-----~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~-h~~~I-tsLafsPdg~~La 138 (568)
|..+++.. ..+ .+|...+.+..++ +.++++++.|++|+|||+.+++++..+. |...+ .+++|+|||++|+
T Consensus 266 d~~tgk~l-~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~La 342 (356)
T 2w18_A 266 NPKTTLSV-GVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLL 342 (356)
T ss_dssp ETTTTEEE-EEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEE
T ss_pred ECCCCEEE-EEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEE
Confidence 99887642 222 3666665544444 7899999999999999999999998884 66554 4689999999999
Q ss_pred EEEcCCeEEEEEC
Q 008356 139 AGTSNGRVVFYDI 151 (568)
Q Consensus 139 sGs~DG~V~VWDl 151 (568)
+|+.|++|+|||+
T Consensus 343 SGS~D~TIklWd~ 355 (356)
T 2w18_A 343 AGQKDGNIFVYHY 355 (356)
T ss_dssp EECTTSCEEEEEE
T ss_pred EEECCCcEEEecC
Confidence 9999999999996
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.78 E-value=1.6e-18 Score=186.09 Aligned_cols=202 Identities=14% Similarity=0.104 Sum_probs=146.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCC----------ceeEE----eeCCCCCcEEEEEEccCCCeEEE----EEeCCCeE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASG----------AKAAE----LKDPNEQVLRVLDYSRNSRHLLV----TAGDDGTL 62 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg----------~~v~~----l~~~h~~~Vs~Lafspdg~~lLa----Tgs~DGtV 62 (568)
++++++.+|++++.++ |+||+.... ..+.. ...++...|.+++|+++++ +|+ +|+.|+.|
T Consensus 43 avs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-~lav~~~sgs~d~~v 120 (434)
T 2oit_A 43 AVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNL-TLSACMMSSEYGSII 120 (434)
T ss_dssp EEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSC-EEEEEEEETTTEEEE
T ss_pred EEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCC-EEEEEEeccCCCceE
Confidence 3678889999999888 899875311 01111 1112456799999999998 566 78899999
Q ss_pred EEEECCCC-----Cc-----eeEEeccCCCCeEEEEEcCC-CCEEEEEeCCCeEEEEECCCCceeeE-eecCCCeEEEEE
Q 008356 63 HLWDTTGR-----SP-----KVSWLKQHSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSC-ITYEAPFSSLAF 130 (568)
Q Consensus 63 ~VWDl~t~-----~~-----~v~~l~~H~~~VtslafsPd-g~~LaSgs~DGtV~IWDlrt~~~v~~-~~h~~~ItsLaf 130 (568)
+|||+.+. .. ....+.+|...|++++|+|+ +++|++++.||+|++||++++..+.. ..|...|.+++|
T Consensus 121 ~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~w 200 (434)
T 2oit_A 121 AFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCW 200 (434)
T ss_dssp EEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEE
T ss_pred EEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEE
Confidence 99998543 11 14556679999999999996 89999999999999999998865533 357889999999
Q ss_pred ecCCCEEEEEEcCCeEEEEECCCCCCceEEEeec-----CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEc
Q 008356 131 IDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRAC-----SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILM 205 (568)
Q Consensus 131 sPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~-----~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~V 205 (568)
+|+|++|++|+.||.|++||++. .....+..+ .|...|.+++|++++.+++......+.. .....+++
T Consensus 201 spdg~~lasgs~dg~v~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~-----~~~~~v~i 273 (434)
T 2oit_A 201 SPKGKQLAVGKQNGTVVQYLPTL--QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTL-----ETSPDVVM 273 (434)
T ss_dssp CTTSSCEEEEETTSCEEEECTTC--CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCS-----SSCCEEEE
T ss_pred cCCCCEEEEEcCCCcEEEEccCC--cccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCcc-----CCCCceEE
Confidence 99999999999999999999983 223333321 1334899999999776664432111000 01234899
Q ss_pred CCCCCC
Q 008356 206 PDPLPS 211 (568)
Q Consensus 206 WDlr~~ 211 (568)
||++..
T Consensus 274 ~~l~~~ 279 (434)
T 2oit_A 274 ALLPKK 279 (434)
T ss_dssp EECCCT
T ss_pred EEeccC
Confidence 998764
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.75 E-value=4.8e-17 Score=158.53 Aligned_cols=204 Identities=12% Similarity=0.012 Sum_probs=145.3
Q ss_pred CccCCCCEEEEEECCCcEEEEECCC-CceeEEeeCCCCCcEEEEEEccCCCeEEEEEe--CCCeEEEE--ECCCCCceeE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLAS-GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG--DDGTLHLW--DTTGRSPKVS 75 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~t-g~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs--~DGtV~VW--Dl~t~~~~v~ 75 (568)
+|+|+|++|++++ ++.|++||+.+ ++.......++...+.+++|+|+++ +|+++. .++.+.|| |+.+.. ..
T Consensus 48 ~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~l~~~~~~~~~--~~ 123 (297)
T 2ojh_A 48 NWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGA-LYAISDKVEFGKSAIYLLPSTGGT--PR 123 (297)
T ss_dssp EECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSS-EEEEEECTTTSSCEEEEEETTCCC--CE
T ss_pred EECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCC-EEEEEEeCCCCcceEEEEECCCCc--eE
Confidence 4899999999986 78999999998 7776666555557788899999998 677777 33445555 445544 34
Q ss_pred EeccCCCCeEEEEEcCCCCEEE-EEeCCCeEEEEEC--CCCceeeEeecCCCeEEEEEecCCCEEEEEE-cCCeEEEEEC
Q 008356 76 WLKQHSAPTAGISFSSDDKIIA-SVGLDKKLYTYDP--GSRRPSSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDI 151 (568)
Q Consensus 76 ~l~~H~~~VtslafsPdg~~La-Sgs~DGtV~IWDl--rt~~~v~~~~h~~~ItsLafsPdg~~LasGs-~DG~V~VWDl 151 (568)
.+..+. .+.+++|+|++++|+ ++..|+.+++|++ .+++......+...+.+++|+|++++|++++ .++.++||++
T Consensus 124 ~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~ 202 (297)
T 2ojh_A 124 LMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRV 202 (297)
T ss_dssp ECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred EeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEE
Confidence 444444 499999999999887 7788998888885 4555544456778899999999999888776 5899999998
Q ss_pred CCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 152 RGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 152 rt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
+........+. .|...+..++|+|++++|+..+....... .....+..|++||+....
T Consensus 203 ~~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~~~-~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 203 RVDGSSVERIT--DSAYGDWFPHPSPSGDKVVFVSYDADVFD-HPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp ETTSSCEEECC--CCSEEEEEEEECTTSSEEEEEEEETTCCS-CCSSEEEEEEEEETTSCS
T ss_pred CCCCCCcEEEe--cCCcccCCeEECCCCCEEEEEEcCCCCCc-ccccCceEEEEEecCCCC
Confidence 74333344444 57778999999999888766532111000 000013568999986543
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.73 E-value=3.4e-16 Score=166.35 Aligned_cols=188 Identities=13% Similarity=0.108 Sum_probs=145.6
Q ss_pred CCEEEEEECC------CcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCC---eEEEEECCCCCceeEE
Q 008356 6 DEHLASISLS------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG---TLHLWDTTGRSPKVSW 76 (568)
Q Consensus 6 G~~LasGs~D------G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DG---tV~VWDl~t~~~~v~~ 76 (568)
+..|+.++.+ +.|++||+. +.....+.. |...+.+++|+|+++ .|+.++.++ .|++||+.+++ ...
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~-~~~~v~~~~~Spdg~-~la~~s~~~~~~~i~~~d~~tg~--~~~ 217 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHR-SPQPLMSPAWSPDGS-KLAYVTFESGRSALVIQTLANGA--VRQ 217 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEE-ESSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTTCC--EEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeC-CCCcceeeEEcCCCC-EEEEEEecCCCcEEEEEECCCCc--EEE
Confidence 6677776654 799999996 444556665 567889999999998 677777775 99999999877 345
Q ss_pred eccCCCCeEEEEEcCCCCEEE-EEeCCC--eEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEc-CC--eEEEEE
Q 008356 77 LKQHSAPTAGISFSSDDKIIA-SVGLDK--KLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTS-NG--RVVFYD 150 (568)
Q Consensus 77 l~~H~~~VtslafsPdg~~La-Sgs~DG--tV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~-DG--~V~VWD 150 (568)
+..|...+.+++|+|++++|+ +++.|+ .|++||+++++......+...+.+++|+|||++|++++. ++ .|++||
T Consensus 218 l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 218 VASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 777888999999999999887 666655 499999999887665678888999999999999998886 44 688889
Q ss_pred CCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCC
Q 008356 151 IRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (568)
Q Consensus 151 lrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~ 211 (568)
+.+... ..+. .|...+.+++|+|+|++|+..... ..+..|++||+...
T Consensus 298 ~~~~~~--~~l~--~~~~~~~~~~~spdG~~l~~~~~~---------~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 298 INGGAP--QRIT--WEGSQNQDADVSSDGKFMVMVSSN---------GGQQHIAKQDLATG 345 (415)
T ss_dssp TTSSCC--EECC--CSSSEEEEEEECTTSSEEEEEEEC---------SSCEEEEEEETTTC
T ss_pred CCCCCE--EEEe--cCCCcccCeEECCCCCEEEEEECc---------CCceEEEEEECCCC
Confidence 887642 3333 466789999999998887766321 11467899998653
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.71 E-value=1.9e-15 Score=152.31 Aligned_cols=200 Identities=13% Similarity=0.087 Sum_probs=148.4
Q ss_pred CccCCCCE-EEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 008356 1 MYNCKDEH-LASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (568)
Q Consensus 1 afSpdG~~-LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~ 79 (568)
+|.+++++ +++...++.|++||+.+++.+..+..+ ...+ .++|+|+++.+++++..++.|++||+.+++.....+..
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 81 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLG-YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE 81 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECC-CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEcc-CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc
Confidence 36666666 566677899999999999988887753 4445 89999999855566666899999999887743556666
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCC---eEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEE-EcCCe-EEEEECCCC
Q 008356 80 HSAPTAGISFSSDDKIIASVGLDK---KLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAG-TSNGR-VVFYDIRGK 154 (568)
Q Consensus 80 H~~~VtslafsPdg~~LaSgs~DG---tV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasG-s~DG~-V~VWDlrt~ 154 (568)
+..++.+++|+|++++|+++..++ .|++||+.+++.+..+.......+++|+|+|++|+++ ..++. |.+|+++..
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 767666699999999999555553 8999999999988888777788999999999866555 55588 999999865
Q ss_pred CCceEE-EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 155 PQPLTV-LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 155 ~~~v~~-l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
...... .....+...+..++|+|+|+++ +++...++.|.+||+.....
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l-----------~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFA-----------FVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEE-----------EEEETTTTEEEEEECSSTTS
T ss_pred CcEeecCCccccCCCCccceEECCCCCEE-----------EEEeCCCCeEEEEECCCCcc
Confidence 432211 1112345568999999987654 33344588999999875443
No 132
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.71 E-value=2e-16 Score=169.79 Aligned_cols=198 Identities=12% Similarity=0.158 Sum_probs=141.8
Q ss_pred CccCCCCEEE----EEECCCcEEEEECCCC--------ce---eEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEE
Q 008356 1 MYNCKDEHLA----SISLSGDLILHNLASG--------AK---AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLW 65 (568)
Q Consensus 1 afSpdG~~La----sGs~DG~V~VWDl~tg--------~~---v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VW 65 (568)
+|+|+|++|+ +|+.|+.|+|||+.++ +. +..+. .|...|.+++|+|+..++|++++.||+|++|
T Consensus 99 ~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~v~~~p~~~~~las~s~Dg~v~iw 177 (434)
T 2oit_A 99 ALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLK-DAGGMVIDMKWNPTVPSMVAVCLADGSIAVL 177 (434)
T ss_dssp EECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCC-SGGGSEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred EEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccC-CCCCceEEEEECCCCCCEEEEEECCCeEEEE
Confidence 4899999999 6788999999998654 22 22333 3678899999999855589999999999999
Q ss_pred ECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee-c-------CCCeEEEEEecCCCEE
Q 008356 66 DTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-Y-------EAPFSSLAFIDDDWIL 137 (568)
Q Consensus 66 Dl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~-h-------~~~ItsLafsPdg~~L 137 (568)
|+++... ......|...|++++|+|++++|++|+.||.|++||++ ++....+. + ...|.+++|++++.++
T Consensus 178 D~~~~~~-~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 178 QVTETVK-VCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp EESSSEE-EEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEE
T ss_pred EcCCCcc-eeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEE
Confidence 9988753 44556788999999999999999999999999999998 55444431 2 2278999999988777
Q ss_pred EEE-EcCC------eEEEEECCCCCC--ceEEEeec-------CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCC
Q 008356 138 TAG-TSNG------RVVFYDIRGKPQ--PLTVLRAC-------SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD 201 (568)
Q Consensus 138 asG-s~DG------~V~VWDlrt~~~--~v~~l~~~-------~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg 201 (568)
++. ..|| .+++||++.... +....+.. +...+-..+.+-++.++++.++....+.-++....|+
T Consensus 256 ~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~~~ 335 (434)
T 2oit_A 256 IVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQSDQ 335 (434)
T ss_dssp EEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECTTS
T ss_pred EEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEecCCC
Confidence 553 3443 399999986531 22222211 1122223344446667776666666666666655443
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.70 E-value=1.5e-15 Score=153.64 Aligned_cols=198 Identities=10% Similarity=0.069 Sum_probs=153.3
Q ss_pred CccCCCCEEEEEEC-------CCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce
Q 008356 1 MYNCKDEHLASISL-------SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK 73 (568)
Q Consensus 1 afSpdG~~LasGs~-------DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~ 73 (568)
+|+|+|++|++++. ++.|.+||+.+++.+..+.. ...+..++|+++++.++++...++.|.+||..+++.
T Consensus 47 ~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~- 123 (353)
T 3vgz_A 47 AYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN--DLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEV- 123 (353)
T ss_dssp EEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE--SSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCE-
T ss_pred EECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec--CCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCee-
Confidence 47899999988874 56899999999998888774 233567899999986677777789999999988773
Q ss_pred eEEeccCCC---------CeEEEEEcCCCCEEEEEe--CCCeEEEEECCCCceeeEee-cCCCeEEEEEecCCCEEEEEE
Q 008356 74 VSWLKQHSA---------PTAGISFSSDDKIIASVG--LDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT 141 (568)
Q Consensus 74 v~~l~~H~~---------~VtslafsPdg~~LaSgs--~DGtV~IWDlrt~~~v~~~~-h~~~ItsLafsPdg~~LasGs 141 (568)
+..+..+.. .+.+++|+|+++++++++ .++.|.+||+.+++.+..+. +...+.+++|+|++++|+++.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 203 (353)
T 3vgz_A 124 KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTN 203 (353)
T ss_dssp EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEEC
T ss_pred EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEc
Confidence 344444332 278999999999887776 48899999999999888886 666689999999999999999
Q ss_pred cCCeEEEEECCCCCCceEEEee--cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 142 SNGRVVFYDIRGKPQPLTVLRA--CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 142 ~DG~V~VWDlrt~~~~v~~l~~--~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
.++.|.+||+.+.+ ....+.. .++...+..++|+|++++++. +...++.|.+||+.....
T Consensus 204 ~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~-----------~~~~~~~v~~~d~~~~~~ 265 (353)
T 3vgz_A 204 ADGELITIDTADNK-ILSRKKLLDDGKEHFFINISLDTARQRAFI-----------TDSKAAEVLVVDTRNGNI 265 (353)
T ss_dssp TTSEEEEEETTTTE-EEEEEECCCSSSCCCEEEEEEETTTTEEEE-----------EESSSSEEEEEETTTCCE
T ss_pred CCCeEEEEECCCCe-EEEEEEcCCCCCCcccceEEECCCCCEEEE-----------EeCCCCEEEEEECCCCcE
Confidence 99999999998873 3333332 124556888999998765433 334468999999876543
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.69 E-value=1.8e-15 Score=151.84 Aligned_cols=196 Identities=10% Similarity=0.042 Sum_probs=138.1
Q ss_pred CccCCCCEEEEEECC-CcEEEEECC--CCce--eEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC--ce
Q 008356 1 MYNCKDEHLASISLS-GDLILHNLA--SGAK--AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS--PK 73 (568)
Q Consensus 1 afSpdG~~LasGs~D-G~V~VWDl~--tg~~--v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~--~~ 73 (568)
+|+|+|++|++++.+ +.|.+|++. +++. +..+.. + ..+..++|+|+++.+++++..++.|++||+..+. ..
T Consensus 44 ~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~ 121 (343)
T 1ri6_A 44 VVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL-P-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGV 121 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC-S-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEE
T ss_pred EECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc-C-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccc
Confidence 489999999998886 999999997 5553 344543 2 2667899999998545555568999999994221 12
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEECCC-Cceee----Ee--ecCCCeEEEEEecCCCEEEEEE-cCC
Q 008356 74 VSWLKQHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPGS-RRPSS----CI--TYEAPFSSLAFIDDDWILTAGT-SNG 144 (568)
Q Consensus 74 v~~l~~H~~~VtslafsPdg~~LaSgs-~DGtV~IWDlrt-~~~v~----~~--~h~~~ItsLafsPdg~~LasGs-~DG 144 (568)
...+. ....+.+++|+|++++|++++ .++.|++||+.+ ++... .+ .....+..++|+|++++|++++ .++
T Consensus 122 ~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~ 200 (343)
T 1ri6_A 122 VDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNS 200 (343)
T ss_dssp EEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTT
T ss_pred ccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCC
Confidence 33333 344589999999999888887 899999999987 55432 12 2445788999999999776665 789
Q ss_pred eEEEEECCCCCCc---eEEEeec----CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 145 RVVFYDIRGKPQP---LTVLRAC----SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 145 ~V~VWDlrt~~~~---v~~l~~~----~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
.|.+||++..... ...+... .....+..++|+|++++|+ ++...++.|.+||+..
T Consensus 201 ~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~-----------v~~~~~~~i~v~d~~~ 262 (343)
T 1ri6_A 201 SVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLY-----------ACDRTASLITVFSVSE 262 (343)
T ss_dssp EEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEE-----------EEETTTTEEEEEEECT
T ss_pred EEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEE-----------EEecCCCEEEEEEEcC
Confidence 9999999642211 1222211 1123567899999866543 3344589999999874
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.69 E-value=6.3e-15 Score=162.85 Aligned_cols=193 Identities=13% Similarity=0.100 Sum_probs=145.5
Q ss_pred CccCCCCEEEEEECCCcEEEEEC--CCCceeEEeeCCCCCcEEEEEEcc----CCCeEEEEEe-CCCeEEEEECCCCCce
Q 008356 1 MYNCKDEHLASISLSGDLILHNL--ASGAKAAELKDPNEQVLRVLDYSR----NSRHLLVTAG-DDGTLHLWDTTGRSPK 73 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl--~tg~~v~~l~~~h~~~Vs~Lafsp----dg~~lLaTgs-~DGtV~VWDl~t~~~~ 73 (568)
+|+|||++|++++.|+.|.+||+ .+++.+..+. +...++.++|+| +++ ++++++ .+++|.+||..+.++
T Consensus 185 ~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~--~g~~p~~va~sp~~~~dg~-~l~v~~~~~~~v~v~D~~t~~~- 260 (543)
T 1nir_A 185 RMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK--IGIEARSVESSKFKGYEDR-YTIAGAYWPPQFAIMDGETLEP- 260 (543)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE--CCSEEEEEEECCSTTCTTT-EEEEEEEESSEEEEEETTTCCE-
T ss_pred EECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe--cCCCcceEEeCCCcCCCCC-EEEEEEccCCeEEEEecccccc-
Confidence 48999999999999999999999 8888888887 345678899999 998 566555 689999999988774
Q ss_pred eEEecc----------CC-CCeEEEEEcCCCC-EEEEEeCCCeEEEEECCCCceee--EeecCCCeEEEEEecCCCEEEE
Q 008356 74 VSWLKQ----------HS-APTAGISFSSDDK-IIASVGLDKKLYTYDPGSRRPSS--CITYEAPFSSLAFIDDDWILTA 139 (568)
Q Consensus 74 v~~l~~----------H~-~~VtslafsPdg~-~LaSgs~DGtV~IWDlrt~~~v~--~~~h~~~ItsLafsPdg~~Las 139 (568)
+..+.. |. ..+..+.++|++. ++++...+++|.+||+.+.+.+. .+.+...+..++|+|+|++|++
T Consensus 261 ~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~v 340 (543)
T 1nir_A 261 KQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMT 340 (543)
T ss_dssp EEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEE
T ss_pred ceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEE
Confidence 344433 22 3789999999655 56677789999999998876544 5567777889999999998776
Q ss_pred EE-cCCeEEEEECCCCCCceEEEeec--CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEec-CCCcEEcCCCCC
Q 008356 140 GT-SNGRVVFYDIRGKPQPLTVLRAC--SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGA-VGDSILMPDPLP 210 (568)
Q Consensus 140 Gs-~DG~V~VWDlrt~~~~v~~l~~~--~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s-~Dg~V~VWDlr~ 210 (568)
+. .++.|.+||+.+++ ....+... .|.+....+ ++|+ ++.+++++. .|++|.+||+.+
T Consensus 341 a~~~~~~v~v~D~~tg~-l~~~i~~g~~ph~g~g~~~-~~p~-----------~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 341 AANNSNKVAVIDSKDRR-LSALVDVGKTPHPGRGANF-VHPK-----------YGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp EEGGGTEEEEEETTTTE-EEEEEECSSSBCCTTCEEE-EETT-----------TEEEEEEEBSSSSEEEEEECCT
T ss_pred EecCCCeEEEEECCCCe-EEEeeccCCCCCCCCCccc-CCCC-----------CccEEEeccCCCceEEEEEeCC
Confidence 65 58999999999873 44444421 254444333 4554 234455554 489999999877
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.69 E-value=6.3e-16 Score=150.59 Aligned_cols=182 Identities=12% Similarity=0.026 Sum_probs=135.6
Q ss_pred CccCCCCEEEEEEC--CCcEEE--EECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 008356 1 MYNCKDEHLASISL--SGDLIL--HNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (568)
Q Consensus 1 afSpdG~~LasGs~--DG~V~V--WDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~ 76 (568)
+|+|+|++|++++. ++.+.| |++.+++ ...+.. + ..+..++|+|+++.+++++..|+.++||+++........
T Consensus 91 ~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~-~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 91 GISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTK-N-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETR 167 (297)
T ss_dssp EECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCS-S-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEE
T ss_pred EECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeec-C-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcceE
Confidence 48999999999983 344555 4555544 344443 2 347889999999966668889999999997433323567
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEECC-CCceeeEe-ecCCCeEEEEEecCCCEEEEEEcC----------
Q 008356 77 LKQHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPG-SRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSN---------- 143 (568)
Q Consensus 77 l~~H~~~VtslafsPdg~~LaSgs-~DGtV~IWDlr-t~~~v~~~-~h~~~ItsLafsPdg~~LasGs~D---------- 143 (568)
+..|...+.+++|+|++++|+.++ .++.+++|++. .+..+..+ .+...+.+++|+|++++|++++.+
T Consensus 168 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~ 247 (297)
T 2ojh_A 168 LTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDL 247 (297)
T ss_dssp CCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSE
T ss_pred cccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccC
Confidence 778888999999999999888766 58889999875 33344444 566778999999999999988765
Q ss_pred -CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEec
Q 008356 144 -GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDET 186 (568)
Q Consensus 144 -G~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s 186 (568)
+.|++||+++.+ ........+|...+.+++|+|++++|+.++
T Consensus 248 ~~~l~~~d~~~~~-~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 248 DVRVQLMDMDGGN-VETLFDLFGGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp EEEEEEEETTSCS-CEEEEEEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred ceEEEEEecCCCC-ceeeeccCCCCcccccceECCCCCEEEEEE
Confidence 569999998764 333333336778899999999988877663
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.68 E-value=8.2e-15 Score=148.11 Aligned_cols=196 Identities=14% Similarity=0.121 Sum_probs=149.2
Q ss_pred CccCCCCEEEEEE-CCCcEEEEECCCCceeEEeeCCCCC--------cEEEEEEccCCCeEEEEE-eCCCeEEEEECCCC
Q 008356 1 MYNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQ--------VLRVLDYSRNSRHLLVTA-GDDGTLHLWDTTGR 70 (568)
Q Consensus 1 afSpdG~~LasGs-~DG~V~VWDl~tg~~v~~l~~~h~~--------~Vs~Lafspdg~~lLaTg-s~DGtV~VWDl~t~ 70 (568)
+|+++|++++++. .++.|.+||+.+++.+..+..+... .+.+++|+|+++.++++. ..++.|.+||..+.
T Consensus 95 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~ 174 (353)
T 3vgz_A 95 TINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI 174 (353)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT
T ss_pred EECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC
Confidence 3789999766554 4799999999999988888764322 268899999998555554 35889999999887
Q ss_pred CceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee-----cCCCeEEEEEecCCCEEEEEEc-CC
Q 008356 71 SPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-----YEAPFSSLAFIDDDWILTAGTS-NG 144 (568)
Q Consensus 71 ~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~-----h~~~ItsLafsPdg~~LasGs~-DG 144 (568)
+. +..+..+...+.+++|+|++++|++++.++.|.+||+.+++.+..+. +...+..++|+|++++|+++.. ++
T Consensus 175 ~~-~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~ 253 (353)
T 3vgz_A 175 KL-KTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAA 253 (353)
T ss_dssp EE-EEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSS
T ss_pred ce-EEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCC
Confidence 63 45555466668999999999999999999999999999998877664 3456888999999998877765 49
Q ss_pred eEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 145 RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 145 ~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
.|.+||+.+.+ ....+.. + . ...++|+|+++++ +++...++.|.+||+.....
T Consensus 254 ~v~~~d~~~~~-~~~~~~~-~--~-~~~~~~s~dg~~l-----------~v~~~~~~~v~~~d~~~~~~ 306 (353)
T 3vgz_A 254 EVLVVDTRNGN-ILAKVAA-P--E-SLAVLFNPARNEA-----------YVTHRQAGKVSVIDAKSYKV 306 (353)
T ss_dssp EEEEEETTTCC-EEEEEEC-S--S-CCCEEEETTTTEE-----------EEEETTTTEEEEEETTTTEE
T ss_pred EEEEEECCCCc-EEEEEEc-C--C-CceEEECCCCCEE-----------EEEECCCCeEEEEECCCCeE
Confidence 99999998874 3444442 1 1 2568999976543 34444588999999876544
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.68 E-value=5.1e-16 Score=174.75 Aligned_cols=198 Identities=11% Similarity=0.088 Sum_probs=150.8
Q ss_pred CccCCCCEEEEEEC-CC-----cEEEEECCCCceeEEeeCCCC-----------------------CcEEEEEEccCCCe
Q 008356 1 MYNCKDEHLASISL-SG-----DLILHNLASGAKAAELKDPNE-----------------------QVLRVLDYSRNSRH 51 (568)
Q Consensus 1 afSpdG~~LasGs~-DG-----~V~VWDl~tg~~v~~l~~~h~-----------------------~~Vs~Lafspdg~~ 51 (568)
+|+|||++|++++. |+ .|++||+.+++....+..+.. ..+..++|+|+|+
T Consensus 43 ~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~- 121 (741)
T 2ecf_A 43 KVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQ- 121 (741)
T ss_dssp EECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSS-
T ss_pred eEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCC-
Confidence 48999999999998 88 899999999887766653211 2367899999998
Q ss_pred EEEEEeCCCeEEEEECCCC---CceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCC----
Q 008356 52 LLVTAGDDGTLHLWDTTGR---SPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAP---- 124 (568)
Q Consensus 52 lLaTgs~DGtV~VWDl~t~---~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~---- 124 (568)
+|++++. +.|++||+.++ . ...+..|...+.+++|+||+++|+.++ ++.|++||+.+++..........
T Consensus 122 ~l~~~~~-~~i~~~d~~~~~~~~--~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~ 197 (741)
T 2ecf_A 122 RLLFPLG-GELYLYDLKQEGKAA--VRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGN 197 (741)
T ss_dssp EEEEEET-TEEEEEESSSCSTTS--CCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEE
T ss_pred EEEEEeC-CcEEEEECCCCCcce--EEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceec
Confidence 5666665 99999999887 4 445677888899999999999999988 46899999998876655432221
Q ss_pred -------------eEEEEEecCCCEEEEEEcCC---------------------------------eEEEEECCC-CCCc
Q 008356 125 -------------FSSLAFIDDDWILTAGTSNG---------------------------------RVVFYDIRG-KPQP 157 (568)
Q Consensus 125 -------------ItsLafsPdg~~LasGs~DG---------------------------------~V~VWDlrt-~~~~ 157 (568)
+..++|+|||++|++++.|+ .|++||+.+ .. .
T Consensus 198 g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~-~ 276 (741)
T 2ecf_A 198 GIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQ-T 276 (741)
T ss_dssp SCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCC-C
T ss_pred cccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCc-e
Confidence 47899999999999988765 789999987 64 3
Q ss_pred eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 158 LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 158 v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
........|...+..++| |+|++|+...... ...+..|++||+....
T Consensus 277 ~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~-------~~~~~~i~~~d~~~g~ 323 (741)
T 2ecf_A 277 QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSR-------DQKKLDLVEVTLASNQ 323 (741)
T ss_dssp EEECCCSCSSEEEEEEEE-EETTEEEEEEEET-------TSSEEEEEEEETTTCC
T ss_pred EEecCCCCcceEEEEEEe-CCCCEEEEEEecc-------cCCeEEEEEEECCCCc
Confidence 332221247788999999 9999887652211 1235778888887654
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.68 E-value=2.6e-15 Score=165.96 Aligned_cols=198 Identities=12% Similarity=0.166 Sum_probs=154.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC--CCCCceeEEec
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT--TGRSPKVSWLK 78 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl--~t~~~~v~~l~ 78 (568)
+|+|++.+++++..|+.|.+||..+++++..+..++. +..++|+|+++ +|++++.|+.|++||+ .+.+ .+..+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spdg~-~l~v~~~d~~V~v~D~~~~t~~-~~~~i~ 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSASGR-YLLVIGRDARIDMIDLWAKEPT-KVAEIK 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTTSC-EEEEEETTSEEEEEETTSSSCE-EEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc--cceEEECCCCC-EEEEECCCCeEEEEECcCCCCc-EEEEEe
Confidence 3678888899999999999999999999999985444 78899999998 7888999999999999 5655 344455
Q ss_pred cCCCCeEEEEEcC----CCCEEEEEe-CCCeEEEEECCCCceeeEeec------------CCCeEEEEEecCCCE-EEEE
Q 008356 79 QHSAPTAGISFSS----DDKIIASVG-LDKKLYTYDPGSRRPSSCITY------------EAPFSSLAFIDDDWI-LTAG 140 (568)
Q Consensus 79 ~H~~~VtslafsP----dg~~LaSgs-~DGtV~IWDlrt~~~v~~~~h------------~~~ItsLafsPdg~~-LasG 140 (568)
+...+..++|+| +++++++++ .+++|.+||..+++++..+.. ...+..+.++|++.. +++.
T Consensus 220 -~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 220 -IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp -CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred -cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 455689999999 999999888 489999999999998877742 236889999997655 5556
Q ss_pred EcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCcccc
Q 008356 141 TSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (568)
Q Consensus 141 s~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~~s 216 (568)
..++.|.+||+....... .. ...+...+..+.|+|+|+++++ ++..++.|.+||+........
T Consensus 299 ~~~g~i~vvd~~~~~~l~-~~-~i~~~~~~~~~~~spdg~~l~v-----------a~~~~~~v~v~D~~tg~l~~~ 361 (543)
T 1nir_A 299 KETGKVLLVNYKDIDNLT-VT-SIGAAPFLHDGGWDSSHRYFMT-----------AANNSNKVAVIDSKDRRLSAL 361 (543)
T ss_dssp TTTTEEEEEECTTSSSCE-EE-EEECCSSCCCEEECTTSCEEEE-----------EEGGGTEEEEEETTTTEEEEE
T ss_pred CCCCeEEEEEecCCCcce-eE-EeccCcCccCceECCCCCEEEE-----------EecCCCeEEEEECCCCeEEEe
Confidence 678999999998764432 11 1235677889999998776533 334588999999887654333
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.67 E-value=4.4e-15 Score=148.54 Aligned_cols=194 Identities=11% Similarity=0.051 Sum_probs=140.7
Q ss_pred CccCCCCEEEEE-ECCCcEEEEECCCCceeEEeeCCCC----CcEEEEEEccCCCeEEEEEe------------CCCeEE
Q 008356 1 MYNCKDEHLASI-SLSGDLILHNLASGAKAAELKDPNE----QVLRVLDYSRNSRHLLVTAG------------DDGTLH 63 (568)
Q Consensus 1 afSpdG~~LasG-s~DG~V~VWDl~tg~~v~~l~~~h~----~~Vs~Lafspdg~~lLaTgs------------~DGtV~ 63 (568)
+|+|+|++++++ ..++.|.+||+.+++.+..+...+. ..+..++|+|+++ +|+++. .++.|+
T Consensus 40 ~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~~~~~~~~~~~i~ 118 (337)
T 1pby_B 40 MVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGK-TLAIYESPVRLELTHFEVQPTRVA 118 (337)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEE
T ss_pred EEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCC-EEEEEecccccccccccccCceEE
Confidence 478999876554 4578999999999998877764321 1456789999998 566554 579999
Q ss_pred EEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeec----------------------
Q 008356 64 LWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY---------------------- 121 (568)
Q Consensus 64 VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h---------------------- 121 (568)
+||+.+.+. +..+.. ...+.+++|+|++++|+++ ++.|++||+.+++.+..+..
T Consensus 119 v~d~~~~~~-~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 194 (337)
T 1pby_B 119 LYDAETLSR-RKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHES 194 (337)
T ss_dssp EEETTTTEE-EEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTT
T ss_pred EEECCCCcE-EEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccC
Confidence 999987663 333333 4568889999999988887 68899999988765543311
Q ss_pred ---------------------------------------------CCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCC
Q 008356 122 ---------------------------------------------EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (568)
Q Consensus 122 ---------------------------------------------~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~ 156 (568)
...+.+++|+|++++|+++ ++.|.+||+.+.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~- 271 (337)
T 1pby_B 195 SGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA- 271 (337)
T ss_dssp TTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE-
T ss_pred CCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCc-
Confidence 1134468999999999888 6899999998763
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCccccc
Q 008356 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSSV 217 (568)
Q Consensus 157 ~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~~s~ 217 (568)
....+. ....+.+++|+|+|++++++ +.++.|++||+........+
T Consensus 272 ~~~~~~---~~~~~~~~~~s~dg~~l~~~------------~~~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 272 SIKRVP---LPHSYYSVNVSTDGSTVWLG------------GALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp EEEEEE---CSSCCCEEEECTTSCEEEEE------------SBSSEEEEEETTTCCEEEEE
T ss_pred Ccceec---CCCceeeEEECCCCCEEEEE------------cCCCcEEEEECcCCcEEEEE
Confidence 333333 33567899999976655443 44899999998876554443
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.67 E-value=2.8e-15 Score=151.02 Aligned_cols=197 Identities=6% Similarity=0.026 Sum_probs=143.2
Q ss_pred CccCCCCEEEEEECCC---cEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCe-EEEEECCCCCcee--
Q 008356 1 MYNCKDEHLASISLSG---DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT-LHLWDTTGRSPKV-- 74 (568)
Q Consensus 1 afSpdG~~LasGs~DG---~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGt-V~VWDl~t~~~~v-- 74 (568)
+|+|+|++|+++..++ .|.+||+.+++.+..+.. .....+++|+|+++.++++...++. |.+|++.......
T Consensus 90 ~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~ 167 (331)
T 3u4y_A 90 DITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI--PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDT 167 (331)
T ss_dssp EECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC--CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEE
T ss_pred EECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC--CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeec
Confidence 4789999999555553 899999999988887764 3445889999999877777777788 9999997544221
Q ss_pred -EEeccCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEECCCCce---eeEeecCCCeEEEEEecCCCEEEEEE-cCCeEEE
Q 008356 75 -SWLKQHSAPTAGISFSSDDKIIASV-GLDKKLYTYDPGSRRP---SSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVF 148 (568)
Q Consensus 75 -~~l~~H~~~VtslafsPdg~~LaSg-s~DGtV~IWDlrt~~~---v~~~~h~~~ItsLafsPdg~~LasGs-~DG~V~V 148 (568)
.........+.+++|+|++++++.+ ..++.|++||+.+++. +..+.....+..++|+|+|++|+++. .++.|.+
T Consensus 168 ~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~ 247 (331)
T 3u4y_A 168 GQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFN 247 (331)
T ss_dssp EEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEE
T ss_pred CCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEE
Confidence 1122345568999999999966554 4689999999999888 77777778889999999999877665 4778999
Q ss_pred EECCCCCCc-eEEEeec--CCCCC---eeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 149 YDIRGKPQP-LTVLRAC--SSSEA---VSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 149 WDlrt~~~~-v~~l~~~--~h~~~---VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
||+.+.+.. +..+... .+... ...++|+|++++| ++++..++.|.+||+..
T Consensus 248 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l-----------~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 248 FNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKL-----------FISANISRELKVFTISG 304 (331)
T ss_dssp EETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEE-----------EEEETTTTEEEEEETTS
T ss_pred EECCCCceeeecccccccccCCCCcccccceEECCCCCEE-----------EEecCCCCcEEEEEecC
Confidence 999876320 1111110 11222 2458999986654 33445578999999865
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.66 E-value=4.6e-15 Score=148.79 Aligned_cols=190 Identities=8% Similarity=0.008 Sum_probs=134.0
Q ss_pred CCEEEEE-ECCCcEEEEECC-CCc--eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCC-CeEEEEECC--CCCce-eEEe
Q 008356 6 DEHLASI-SLSGDLILHNLA-SGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD-GTLHLWDTT--GRSPK-VSWL 77 (568)
Q Consensus 6 G~~LasG-s~DG~V~VWDl~-tg~--~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~D-GtV~VWDl~--t~~~~-v~~l 77 (568)
+++++++ +.++.|++||+. +++ .+..+. +...+.+++|+|+++ +|++++.+ +.|++|+++ ++... +..+
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~spdg~-~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVD--VPGQVQPMVVSPDKR-YLYVGVRPEFRVLAYRIAPDDGALTFAAES 80 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEE--CSSCCCCEEECTTSS-EEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEe--cCCCCceEEECCCCC-EEEEeecCCCeEEEEEecCCCCceeecccc
Confidence 3445544 679999999995 343 233333 555677899999998 56666655 999999997 44422 2333
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeC-CCeEEEEECC---CCceeeEeecCCCeEEEEEecCCCEEEEEE-cCCeEEEEECC
Q 008356 78 KQHSAPTAGISFSSDDKIIASVGL-DKKLYTYDPG---SRRPSSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIR 152 (568)
Q Consensus 78 ~~H~~~VtslafsPdg~~LaSgs~-DGtV~IWDlr---t~~~v~~~~h~~~ItsLafsPdg~~LasGs-~DG~V~VWDlr 152 (568)
..+. .+.+++|+|++++|++++. ++.|++||+. ..+.+..+.....+.+++|+|++++|++++ .++.|++||+.
T Consensus 81 ~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 159 (343)
T 1ri6_A 81 ALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVS 159 (343)
T ss_dssp ECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred ccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEec
Confidence 3333 7899999999998876664 8899999994 334455555666799999999999888887 89999999998
Q ss_pred CCCCceEEE--e-ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 153 GKPQPLTVL--R-ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 153 t~~~~v~~l--~-~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
......... . .......+..++|+|++++++ ++...++.|.+||+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~-----------~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 160 DDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY-----------CVNELNSSVDVWELKD 209 (343)
T ss_dssp TTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE-----------EEETTTTEEEEEESSC
T ss_pred CCCceeeecccccccCCCCCcceEEECCCCCEEE-----------EEeCCCCEEEEEEecC
Confidence 733322211 1 112345788999999876543 3334588999999854
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.66 E-value=9.2e-15 Score=146.20 Aligned_cols=145 Identities=13% Similarity=0.089 Sum_probs=118.6
Q ss_pred CEEEEEECCCcEEEEECCCCceeEEeeCCCCC-cEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-cC----
Q 008356 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQ-VLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-QH---- 80 (568)
Q Consensus 7 ~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~-~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~-~H---- 80 (568)
++|++++.++.|++||+.+++.+..+...+.. .+..++|+|+++.+++++..++.|.+||+.+++. +..+. .+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~ 80 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGET-LGRIDLSTPEER 80 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCE-EEEEECCBTTEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCe-EeeEEcCCcccc
Confidence 57899999999999999999988888743322 3677999999986677777889999999988763 33332 22
Q ss_pred CCCeEEEEEcCCCCEEEEEe------------CCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEE
Q 008356 81 SAPTAGISFSSDDKIIASVG------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs------------~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~V 148 (568)
...+.+++|+|++++|+++. .++.|.+||+.+++.+..+.....+.+++|+|++++|+++ ++.|++
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEE
Confidence 22678899999999998886 6799999999999888877767778899999999988888 688999
Q ss_pred EECCCC
Q 008356 149 YDIRGK 154 (568)
Q Consensus 149 WDlrt~ 154 (568)
||+.+.
T Consensus 159 ~d~~~~ 164 (337)
T 1pby_B 159 MDPEAG 164 (337)
T ss_dssp EETTTT
T ss_pred EECCCC
Confidence 999876
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.64 E-value=9.1e-16 Score=171.96 Aligned_cols=197 Identities=10% Similarity=0.069 Sum_probs=145.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCC---cEEEEEEccCCCeEEEEEeCC---------CeEEEEECC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQ---VLRVLDYSRNSRHLLVTAGDD---------GTLHLWDTT 68 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~---~Vs~Lafspdg~~lLaTgs~D---------GtV~VWDl~ 68 (568)
+|+|||+++++ +.||.|++||+.+++....+.. +.. .|..++|+|+|+ +|++++.+ +.|++||+.
T Consensus 23 ~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~-~~~~~~~v~~~~~SpDg~-~l~~~~~~~~~~~~~~~~~i~~~d~~ 99 (723)
T 1xfd_A 23 KWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEG-KKIESLRAIRYEISPDRE-YALFSYNVEPIYQHSYTGYYVLSKIP 99 (723)
T ss_dssp CBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECT-TTTTTTTCSEEEECTTSS-EEEEEESCCCCSSSCCCSEEEEEESS
T ss_pred EEcCCCcEEEE-eCCCCEEEEECCCCcEEEEecc-ccccccccceEEECCCCC-EEEEEecCccceeecceeeEEEEECC
Confidence 58999997766 7899999999999988777764 332 378899999998 67777654 789999998
Q ss_pred CCCceeEEec---cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeec-CCC------------------eE
Q 008356 69 GRSPKVSWLK---QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY-EAP------------------FS 126 (568)
Q Consensus 69 t~~~~v~~l~---~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h-~~~------------------It 126 (568)
+++. ..+. .|...+..++|+|||++|+.++. +.|++||+.+++....... ... +.
T Consensus 100 ~~~~--~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~ 176 (723)
T 1xfd_A 100 HGDP--QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHI 176 (723)
T ss_dssp SCCC--EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSE
T ss_pred CCce--EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcc
Confidence 8763 2333 34555899999999999999886 7899999998877665532 222 37
Q ss_pred EEEEecCCCEEEEEEcCC----------------------------------eEEEEECCCCCCceEEEeec----CCCC
Q 008356 127 SLAFIDDDWILTAGTSNG----------------------------------RVVFYDIRGKPQPLTVLRAC----SSSE 168 (568)
Q Consensus 127 sLafsPdg~~LasGs~DG----------------------------------~V~VWDlrt~~~~v~~l~~~----~h~~ 168 (568)
+++|+|||++|++++.|+ .|++||+.+... ...+... .+..
T Consensus 177 ~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~-~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 177 AHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH-DLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC-CEECCCCCCGGGSSE
T ss_pred eEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce-eEEeeCCccCCCccc
Confidence 899999999999987653 799999988742 2333311 1356
Q ss_pred CeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 169 AVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 169 ~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
.+..++|+|||++++..... ...+..|++||+....
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~--------~~~~~~i~~~d~~~g~ 291 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNR--------AQNVSILTLCDATTGV 291 (723)
T ss_dssp EEEEEEESSSSEEEEEEEET--------TSCEEEEEEEETTTCC
T ss_pred eeEEEEEeCCCeEEEEEEcC--------CCCeEEEEEEeCCCCc
Confidence 78999999998877654221 1124578888876544
No 145
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.64 E-value=1e-14 Score=146.82 Aligned_cols=151 Identities=11% Similarity=0.046 Sum_probs=117.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc-
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ- 79 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~- 79 (568)
+++++++++++++.++.|++||+.+++.+..+..+....+..++|+|+++.+++++..++.|++||+.+++. ...+..
T Consensus 6 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~-~~~~~~~ 84 (349)
T 1jmx_B 6 ALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN-TFHANLS 84 (349)
T ss_dssp CCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE-EEEEESC
T ss_pred cccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE-EEEEEcc
Confidence 467888899999999999999999999888887543224667999999985666777899999999987763 333332
Q ss_pred C-----CCCeEEEEEcCCCCEEEEEeCC------------CeEEEEECCCCce---eeEeecCCCeEEEEEecCCCEEEE
Q 008356 80 H-----SAPTAGISFSSDDKIIASVGLD------------KKLYTYDPGSRRP---SSCITYEAPFSSLAFIDDDWILTA 139 (568)
Q Consensus 80 H-----~~~VtslafsPdg~~LaSgs~D------------GtV~IWDlrt~~~---v~~~~h~~~ItsLafsPdg~~Las 139 (568)
+ ...+.+++|+|++++|++++.+ +.|.+||+.+++. +..+.+...+.+++|+|+|+ +++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~ 163 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYV 163 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEE
Confidence 2 2337889999999999998865 8999999988543 34455666789999999999 555
Q ss_pred EEcCCeEEEEECCCCC
Q 008356 140 GTSNGRVVFYDIRGKP 155 (568)
Q Consensus 140 Gs~DG~V~VWDlrt~~ 155 (568)
++ +.|.+||+.+.+
T Consensus 164 ~~--~~i~~~d~~~~~ 177 (349)
T 1jmx_B 164 AG--PDIYKMDVKTGK 177 (349)
T ss_dssp ES--SSEEEECTTTCC
T ss_pred cc--CcEEEEeCCCCc
Confidence 54 349999998764
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.63 E-value=7.6e-15 Score=147.85 Aligned_cols=193 Identities=9% Similarity=0.081 Sum_probs=137.4
Q ss_pred CccCCCCEEEEE-ECCCcEEEEECCCCceeEEeeCCC-----CCcEEEEEEccCCCeEEEEEeCC------------CeE
Q 008356 1 MYNCKDEHLASI-SLSGDLILHNLASGAKAAELKDPN-----EQVLRVLDYSRNSRHLLVTAGDD------------GTL 62 (568)
Q Consensus 1 afSpdG~~LasG-s~DG~V~VWDl~tg~~v~~l~~~h-----~~~Vs~Lafspdg~~lLaTgs~D------------GtV 62 (568)
+|+|+|++++++ ..++.|.+||+.+++.+..+...+ ...+..++|+|+++ +|+++..+ +.|
T Consensus 49 ~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~~~~~~~~i 127 (349)
T 1jmx_B 49 MMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGK-EVYATVNPTQRLNDHYVVKPPRL 127 (349)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSS-EEEEEEEEEEECSSCEEECCCEE
T ss_pred EECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCC-EEEEEcccccccccccccCCCeE
Confidence 478999876554 468999999999998887776433 22356789999998 56666644 899
Q ss_pred EEEECCCCCce--eEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecC------------------
Q 008356 63 HLWDTTGRSPK--VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYE------------------ 122 (568)
Q Consensus 63 ~VWDl~t~~~~--v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~------------------ 122 (568)
++||+.+++.. +... .+...+.+++|+|+++ +++++. .|++||+.+++.+..+...
T Consensus 128 ~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (349)
T 1jmx_B 128 EVFSTADGLEAKPVRTF-PMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPH 203 (349)
T ss_dssp EEEEGGGGGGBCCSEEE-ECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCC
T ss_pred EEEECCCccccceeeec-cCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecC
Confidence 99999764311 2222 3444689999999999 555544 4999999988776555321
Q ss_pred ---------------------------------------------------CCeEEEEEec-CCCEEEEEEcCCeEEEEE
Q 008356 123 ---------------------------------------------------APFSSLAFID-DDWILTAGTSNGRVVFYD 150 (568)
Q Consensus 123 ---------------------------------------------------~~ItsLafsP-dg~~LasGs~DG~V~VWD 150 (568)
..+..++|+| ++++|+++ ++.|.+||
T Consensus 204 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d 281 (349)
T 1jmx_B 204 QSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYD 281 (349)
T ss_dssp CCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEE
T ss_pred CCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEE
Confidence 1345677889 99999988 88999999
Q ss_pred CCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCcccc
Q 008356 151 IRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSS 216 (568)
Q Consensus 151 lrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~~s 216 (568)
+++.+ ....+. ....+.+++|+|++++|+.+ +.++.|++||+........
T Consensus 282 ~~~~~-~~~~~~---~~~~~~~~~~s~dg~~l~~~------------~~~~~v~v~d~~~~~~~~~ 331 (349)
T 1jmx_B 282 LKQRK-LIKAAN---LDHTYYCVAFDKKGDKLYLG------------GTFNDLAVFNPDTLEKVKN 331 (349)
T ss_dssp TTTTE-EEEEEE---CSSCCCEEEECSSSSCEEEE------------SBSSEEEEEETTTTEEEEE
T ss_pred CccCe-EEEEEc---CCCCccceEECCCCCEEEEe------------cCCCeEEEEeccccceeee
Confidence 98863 333333 33457899999986655433 4479999999877654443
No 147
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.60 E-value=1.2e-13 Score=140.72 Aligned_cols=197 Identities=9% Similarity=0.098 Sum_probs=134.3
Q ss_pred CccCCCCEEEEEE-CCCcEEEEECC-CCc--eeEEeeCC--------CCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC
Q 008356 1 MYNCKDEHLASIS-LSGDLILHNLA-SGA--KAAELKDP--------NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT 68 (568)
Q Consensus 1 afSpdG~~LasGs-~DG~V~VWDl~-tg~--~v~~l~~~--------h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~ 68 (568)
+|+|+|++|++++ .++.|.+|++. ++. .+..+... ....+.+++|+|+++ ++++...++.|++||+.
T Consensus 92 a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~ 170 (347)
T 3hfq_A 92 AVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVS 170 (347)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEEC
Confidence 4789999999888 67999999995 333 23333321 112478899999998 88888889999999998
Q ss_pred -CCCce-eEEecc-CCCCeEEEEEcCCCCEEEE-EeCCCeEEEEECCC--Ccee--eEee-cC------CCeEEEEEecC
Q 008356 69 -GRSPK-VSWLKQ-HSAPTAGISFSSDDKIIAS-VGLDKKLYTYDPGS--RRPS--SCIT-YE------APFSSLAFIDD 133 (568)
Q Consensus 69 -t~~~~-v~~l~~-H~~~VtslafsPdg~~LaS-gs~DGtV~IWDlrt--~~~v--~~~~-h~------~~ItsLafsPd 133 (568)
++... ...+.. ....+..++|+|++++|++ ...++.|++||+.. ++.. ..+. .. ..+..++|+|+
T Consensus 171 ~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spd 250 (347)
T 3hfq_A 171 DAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHD 250 (347)
T ss_dssp TTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTT
T ss_pred CCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCC
Confidence 33311 111222 2346889999999996665 45788999999874 4432 2221 11 34889999999
Q ss_pred CCEEEE-EEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 134 DWILTA-GTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 134 g~~Las-Gs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
|++|++ ...++.|.+||+..............+...+..++|+|+|++|+++ ...++.|.+|++.
T Consensus 251 G~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~-----------~~~~~~v~v~~~d 316 (347)
T 3hfq_A 251 GHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVV-----------NQNTDNATLYARD 316 (347)
T ss_dssp SCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEE-----------ETTTTEEEEEEEC
T ss_pred CCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEE-----------EcCCCcEEEEEEe
Confidence 998755 5568999999997432211222222455678999999987765444 3346788999553
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.57 E-value=1.4e-13 Score=140.24 Aligned_cols=196 Identities=9% Similarity=0.099 Sum_probs=131.5
Q ss_pred CccCCCCEEEEEEC---CCcEEEEECCCCce--eEEeeCCCCCcEEEEEEccCCCeEEEEEe-CCCeEEEEECCCC-Cce
Q 008356 1 MYNCKDEHLASISL---SGDLILHNLASGAK--AAELKDPNEQVLRVLDYSRNSRHLLVTAG-DDGTLHLWDTTGR-SPK 73 (568)
Q Consensus 1 afSpdG~~LasGs~---DG~V~VWDl~tg~~--v~~l~~~h~~~Vs~Lafspdg~~lLaTgs-~DGtV~VWDl~t~-~~~ 73 (568)
+|+|||+ |++++. ++.|++||+.+++. +..+.. +...+..++|+|+++ +|++++ .++.|.+||+... ...
T Consensus 46 a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~-~~~~p~~~a~spdg~-~l~~~~~~~~~v~v~~~~~~g~~~ 122 (347)
T 3hfq_A 46 ALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVA-PGTPPAYVAVDEARQ-LVYSANYHKGTAEVMKIAADGALT 122 (347)
T ss_dssp EECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEE-ESCCCSEEEEETTTT-EEEEEETTTTEEEEEEECTTSCEE
T ss_pred EEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeec-CCCCCEEEEECCCCC-EEEEEeCCCCEEEEEEeCCCCCee
Confidence 4789999 655554 68999999976653 333332 344567799999998 555555 7899999999632 211
Q ss_pred -eEEecc---------CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC-CCceeeE--e--ecCCCeEEEEEecCCCEEE
Q 008356 74 -VSWLKQ---------HSAPTAGISFSSDDKIIASVGLDKKLYTYDPG-SRRPSSC--I--TYEAPFSSLAFIDDDWILT 138 (568)
Q Consensus 74 -v~~l~~---------H~~~VtslafsPdg~~LaSgs~DGtV~IWDlr-t~~~v~~--~--~h~~~ItsLafsPdg~~La 138 (568)
+..+.. +...+.+++|+|+++++++...++.|++||+. +++.... + .....+..++|+|+|++|+
T Consensus 123 ~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~ 202 (347)
T 3hfq_A 123 LTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAF 202 (347)
T ss_dssp EEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEE
T ss_pred ecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEE
Confidence 222211 12348899999999966666678899999998 4543322 1 2344688999999999776
Q ss_pred EE-EcCCeEEEEECCCCCCceE---EEeecCC----CCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 139 AG-TSNGRVVFYDIRGKPQPLT---VLRACSS----SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 139 sG-s~DG~V~VWDlrt~~~~v~---~l~~~~h----~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
+. ..++.|.+|+++....... .+..... ...+..++|+|+|++|+. +...++.|.+||+..
T Consensus 203 v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v-----------~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 203 LAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYV-----------SNRGYNTLAVFAVTA 271 (347)
T ss_dssp EEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEE-----------EEETTTEEEEEEECG
T ss_pred EEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEE-----------EeCCCCEEEEEEECC
Confidence 64 5688999999885222222 2221111 145888999998776533 334478899999863
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.56 E-value=7.5e-14 Score=164.76 Aligned_cols=174 Identities=9% Similarity=0.151 Sum_probs=143.7
Q ss_pred Ccc-CCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCC-cEEEEEEccCCCeEEEEEeCCCeEE-EEECCCCCceeEEe
Q 008356 1 MYN-CKDEHLASISLSGDLILHNLASGAKAAELKDPNEQ-VLRVLDYSRNSRHLLVTAGDDGTLH-LWDTTGRSPKVSWL 77 (568)
Q Consensus 1 afS-pdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~-~Vs~Lafspdg~~lLaTgs~DGtV~-VWDl~t~~~~v~~l 77 (568)
+|+ |||++|++++ ++.|++|++..++.. .+.. +.. .+..++|+ +++ .|+.++.++.+. +||+.++. ...+
T Consensus 302 ~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~-~~~~~~~~~~~s-dg~-~l~~~s~~~~l~~~~d~~~~~--~~~l 374 (1045)
T 1k32_A 302 DFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPE-PLRIRYVRRGGD-TKV-AFIHGTREGDFLGIYDYRTGK--AEKF 374 (1045)
T ss_dssp EEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSC-CSCEEEEEECSS-SEE-EEEEEETTEEEEEEEETTTCC--EEEC
T ss_pred eecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccC-CCcceEEeeeEc-CCC-eEEEEECCCceEEEEECCCCC--ceEe
Confidence 378 9999999887 789999999877654 3544 444 78899999 887 677777788898 99998776 3445
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCC----------eE
Q 008356 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNG----------RV 146 (568)
Q Consensus 78 ~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG----------~V 146 (568)
..|...+.+++|+|++++|++++.++.|++||+.+++..... .|...+.+++|+|||++|++++.++ .|
T Consensus 375 ~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i 454 (1045)
T 1k32_A 375 EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI 454 (1045)
T ss_dssp CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeE
Confidence 578889999999999999999999999999999999887777 6888899999999999999887654 89
Q ss_pred EEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 008356 147 VFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 147 ~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~ 185 (568)
++||+.+.. ...+ ..|...+..++|+|+|++|+..
T Consensus 455 ~l~d~~~g~--~~~l--~~~~~~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 455 HVYDMEGRK--IFAA--TTENSHDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp EEEETTTTE--EEEC--SCSSSBEEEEEECTTSCEEEEE
T ss_pred EEEECCCCc--EEEe--eCCCcccCCceEcCCCCEEEEE
Confidence 999998763 2333 3677889999999998877665
No 150
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.55 E-value=4.6e-14 Score=158.10 Aligned_cols=181 Identities=13% Similarity=0.139 Sum_probs=132.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCC-----CceeEEeeCCCCCc-------------EEEEEEccCCCeEEEEEe-----
Q 008356 1 MYNCKDEHLASISLSGDLILHNLAS-----GAKAAELKDPNEQV-------------LRVLDYSRNSRHLLVTAG----- 57 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~t-----g~~v~~l~~~h~~~-------------Vs~Lafspdg~~lLaTgs----- 57 (568)
+|+|||++|+++ .++.|++||+.+ ++.......+.... +.++.|+|+|+ +|++++
T Consensus 127 ~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~-~la~~~~d~~~ 204 (706)
T 2z3z_A 127 DFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGS-CLAFYRMDQSM 204 (706)
T ss_dssp EECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSS-EEEEEEEECTT
T ss_pred cCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCC-EEEEEEECCCC
Confidence 489999999985 689999999988 77654444322221 47899999998 566665
Q ss_pred ----------------------------CCCeEEEEECCCCCceeEEe-ccCCCCeEEEEEcCCCCEEEEEeCCC-----
Q 008356 58 ----------------------------DDGTLHLWDTTGRSPKVSWL-KQHSAPTAGISFSSDDKIIASVGLDK----- 103 (568)
Q Consensus 58 ----------------------------~DGtV~VWDl~t~~~~v~~l-~~H~~~VtslafsPdg~~LaSgs~DG----- 103 (568)
.+..|++||+.+++...... ..|...+.+++|+||+++|++++.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 284 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNEC 284 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEE
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCee
Confidence 44679999998876321111 25667899999999999999988776
Q ss_pred eEEEEECCCC-ceeeEe--ecCC---CeEEEEEec--CCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeE-EE
Q 008356 104 KLYTYDPGSR-RPSSCI--TYEA---PFSSLAFID--DDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSS-LC 174 (568)
Q Consensus 104 tV~IWDlrt~-~~v~~~--~h~~---~ItsLafsP--dg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~Vts-La 174 (568)
.|++||+.++ ...... .+.. .+..++|+| +|++|+++..|+.++||+++........+. .|...+.. ++
T Consensus 285 ~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~--~~~~~v~~~~~ 362 (706)
T 2z3z_A 285 KVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT--KGEWEVTNFAG 362 (706)
T ss_dssp EEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC--CSSSCEEEEEE
T ss_pred EEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC--CCCeEEEeeeE
Confidence 8999999998 433333 2222 246789999 999999999999999998863323334443 56667776 79
Q ss_pred EccCCCeEEEe
Q 008356 175 WQRAKPVFIDE 185 (568)
Q Consensus 175 fspdg~~Las~ 185 (568)
|+|+++.|+..
T Consensus 363 ~spdg~~l~~~ 373 (706)
T 2z3z_A 363 FDPKGTRLYFE 373 (706)
T ss_dssp ECTTSSEEEEE
T ss_pred EcCCCCEEEEE
Confidence 99987766544
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.55 E-value=1e-12 Score=134.71 Aligned_cols=194 Identities=8% Similarity=0.093 Sum_probs=131.3
Q ss_pred CCCEEEEEE-CCCcEEEEECCCCceeEE----ee--C-------CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Q 008356 5 KDEHLASIS-LSGDLILHNLASGAKAAE----LK--D-------PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR 70 (568)
Q Consensus 5 dG~~LasGs-~DG~V~VWDl~tg~~v~~----l~--~-------~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~ 70 (568)
++++|++++ .++.|.+|++.....+.. +. + .+...+.+++|+|+++.++++...++.|++|++...
T Consensus 108 dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~ 187 (361)
T 3scy_A 108 NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPN 187 (361)
T ss_dssp CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCC
Confidence 678787776 578999999975432211 11 1 012235789999999865666666899999998754
Q ss_pred Cc------e------eEEeccCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEECCCCceee--Eee----cCCCeEEEEEe
Q 008356 71 SP------K------VSWLKQHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPGSRRPSS--CIT----YEAPFSSLAFI 131 (568)
Q Consensus 71 ~~------~------v~~l~~H~~~VtslafsPdg~~LaSgs-~DGtV~IWDlrt~~~v~--~~~----h~~~ItsLafs 131 (568)
.. . ......+...+..++|+|+++++++++ .++.|.+||+.+++... .+. +......++|+
T Consensus 188 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~s 267 (361)
T 3scy_A 188 ANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLS 267 (361)
T ss_dssp CCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEEC
T ss_pred CCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEEC
Confidence 32 1 122334456688999999999887777 68999999998775422 221 23457899999
Q ss_pred cCCCEEEEEEcC--CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 132 DDDWILTAGTSN--GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 132 Pdg~~LasGs~D--G~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
|||++|+++..+ +.|.+|+++........+........+.+++|+|+|++|+.+ ...++.|.+|++.
T Consensus 268 pdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~-----------~~~~~~v~v~~~d 336 (361)
T 3scy_A 268 PDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVA-----------CRDTNVIQIFERD 336 (361)
T ss_dssp TTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEE-----------ETTTTEEEEEEEC
T ss_pred CCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEE-----------ECCCCCEEEEEEE
Confidence 999999777654 899999997321122222211224578899999987766544 2346788886543
No 152
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.54 E-value=5.9e-14 Score=157.91 Aligned_cols=192 Identities=16% Similarity=0.114 Sum_probs=137.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCc---------------EEEEEEccCCCeEEEEEeCCC-----
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQV---------------LRVLDYSRNSRHLLVTAGDDG----- 60 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~---------------Vs~Lafspdg~~lLaTgs~DG----- 60 (568)
+|+|||++|+.++ ++.|++||+.+++.......+.... +..+.|+|+|+ .|+.++.|+
T Consensus 158 ~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~-~l~~~~~d~~~~~~ 235 (741)
T 2ecf_A 158 KLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDS-AIAYARIDESPVPV 235 (741)
T ss_dssp EECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSS-CEEEEEEECTTSCE
T ss_pred cCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCC-EEEEEEEcCCCCce
Confidence 4899999999887 4699999998877654443322211 36789999998 466665554
Q ss_pred ----------------------------eEEEEECCC-CCceeEEec-cCCCCeEEEEEcCCCCEEEEEeC-----CCeE
Q 008356 61 ----------------------------TLHLWDTTG-RSPKVSWLK-QHSAPTAGISFSSDDKIIASVGL-----DKKL 105 (568)
Q Consensus 61 ----------------------------tV~VWDl~t-~~~~v~~l~-~H~~~VtslafsPdg~~LaSgs~-----DGtV 105 (568)
.|++||+.+ ++....... .|...+..++| ||+++|+++.. +..|
T Consensus 236 ~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i 314 (741)
T 2ecf_A 236 QKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDL 314 (741)
T ss_dssp EEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEE
T ss_pred EecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEE
Confidence 789999987 763222111 47788999999 99999987754 5689
Q ss_pred EEEECCCCceeeEeec-C-C---CeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEE-EEccCC
Q 008356 106 YTYDPGSRRPSSCITY-E-A---PFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSL-CWQRAK 179 (568)
Q Consensus 106 ~IWDlrt~~~v~~~~h-~-~---~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsL-afspdg 179 (568)
++||+.+++....+.. . . .+..++|+|||++++++..||.++||.++.... ...+. .|...|..+ .|+|++
T Consensus 315 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~--~~~~~v~~~~~~s~dg 391 (741)
T 2ecf_A 315 VEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT--HGNWSVDELLAVDEKA 391 (741)
T ss_dssp EEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESC--CSSSCEEEEEEEETTT
T ss_pred EEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeee--ecceEEEeEeEEeCCC
Confidence 9999999987766632 2 2 456899999999999999999888887764333 34443 567778887 599987
Q ss_pred CeEEEeccCCCCeEEEEecCCC--cEEcCCCC
Q 008356 180 PVFIDETTCKAETALLGGAVGD--SILMPDPL 209 (568)
Q Consensus 180 ~~Las~s~ssd~~~Lls~s~Dg--~V~VWDlr 209 (568)
+.|+.. +..++ .+++|++.
T Consensus 392 ~~l~~~-----------~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 392 GLAYFR-----------AGIESARESQIYAVP 412 (741)
T ss_dssp TEEEEE-----------ECSSCTTCBEEEEEE
T ss_pred CEEEEE-----------EeCCCCceEEEEEEE
Confidence 766443 22333 67777654
No 153
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.53 E-value=1.1e-13 Score=154.98 Aligned_cols=179 Identities=9% Similarity=0.044 Sum_probs=129.1
Q ss_pred CccCCCCEEEEEECC---------CcEEEEECCCCceeEEeeC--CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Q 008356 1 MYNCKDEHLASISLS---------GDLILHNLASGAKAAELKD--PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG 69 (568)
Q Consensus 1 afSpdG~~LasGs~D---------G~V~VWDl~tg~~v~~l~~--~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t 69 (568)
+|+|||++|++++.+ +.|++||+.+++. ..+.. .+...+..++|+|+|+ .|+.++. +.|++||+.+
T Consensus 67 ~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~-~la~~~~-~~i~~~~~~~ 143 (723)
T 1xfd_A 67 EISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQ-QLIFIFE-NNIYYCAHVG 143 (723)
T ss_dssp EECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSSTT-CEEEEET-TEEEEESSSS
T ss_pred EECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCCC-EEEEEEC-CeEEEEECCC
Confidence 489999999999774 7888999988875 33432 1233477799999998 5666665 7999999988
Q ss_pred CCceeEEeccCCCC------------------eEEEEEcCCCCEEEEEeCCC----------------------------
Q 008356 70 RSPKVSWLKQHSAP------------------TAGISFSSDDKIIASVGLDK---------------------------- 103 (568)
Q Consensus 70 ~~~~v~~l~~H~~~------------------VtslafsPdg~~LaSgs~DG---------------------------- 103 (568)
++. ......+... +.+++|+||+++|++++.|+
T Consensus 144 g~~-~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 222 (723)
T 1xfd_A 144 KQA-IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAG 222 (723)
T ss_dssp SCC-EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTT
T ss_pred Cce-EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCC
Confidence 764 3333333332 37899999999999987553
Q ss_pred ------eEEEEECCCCceeeEee-c------CCCeEEEEEecCCCEEEEEEcC----CeEEEEECCCCCCceEEEeecCC
Q 008356 104 ------KLYTYDPGSRRPSSCIT-Y------EAPFSSLAFIDDDWILTAGTSN----GRVVFYDIRGKPQPLTVLRACSS 166 (568)
Q Consensus 104 ------tV~IWDlrt~~~v~~~~-h------~~~ItsLafsPdg~~LasGs~D----G~V~VWDlrt~~~~v~~l~~~~h 166 (568)
.|++||+.+++....+. + ...+..++|+|||++|++...+ ..|++||+.++. ....+.. .+
T Consensus 223 ~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~-~~~~~~~-~~ 300 (723)
T 1xfd_A 223 SENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGV-CTKKHED-ES 300 (723)
T ss_dssp SCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCC-EEEEEEE-EC
T ss_pred CCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCc-ceEEEEe-cc
Confidence 79999999887544442 2 4578999999999988776543 579999998874 3333321 23
Q ss_pred CCCee----EEEEccCCCeEEEe
Q 008356 167 SEAVS----SLCWQRAKPVFIDE 185 (568)
Q Consensus 167 ~~~Vt----sLafspdg~~Las~ 185 (568)
...+. .++|+|+|+.|+..
T Consensus 301 ~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 301 EAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp SSCCCCCCCCCEECTTSCSEEEE
T ss_pred CCEEeccCCCceEcCCCCeEEEE
Confidence 34443 78999998876543
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.53 E-value=7.5e-14 Score=164.75 Aligned_cols=198 Identities=11% Similarity=0.068 Sum_probs=150.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCC----------CCCcEEEEEEc-cCCCeEEEEEeCCCeEEEEECCC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDP----------NEQVLRVLDYS-RNSRHLLVTAGDDGTLHLWDTTG 69 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~----------h~~~Vs~Lafs-pdg~~lLaTgs~DGtV~VWDl~t 69 (568)
+|+|||++|+.+ .++.|++||+... .+..+..+ +...+..++|+ |+|+ .|+.++ ++.|++|++.+
T Consensus 251 ~~SpDG~~la~~-~~~~i~~~d~~~~-~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~-~la~~~-~~~i~~~~~~~ 326 (1045)
T 1k32_A 251 HLNTDGRRILFS-KGGSIYIFNPDTE-KIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGD-LIAFVS-RGQAFIQDVSG 326 (1045)
T ss_dssp EEEESSSCEEEE-ETTEEEEECTTTC-CEEECCCCCCCBCCSEEEECGGGGEEEEEECGGG-CEEEEE-TTEEEEECTTS
T ss_pred eEcCCCCEEEEE-eCCEEEEecCCce-EeeeeccCcccccccccccccccceeeecCCCCC-EEEEEE-cCEEEEEcCCC
Confidence 478999999887 4899999998444 34355431 12357789999 9998 455555 78999999987
Q ss_pred CCceeEEeccCCC-CeEEEEEcCCCCEEEEEeCCCeEE-EEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEE
Q 008356 70 RSPKVSWLKQHSA-PTAGISFSSDDKIIASVGLDKKLY-TYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVV 147 (568)
Q Consensus 70 ~~~~v~~l~~H~~-~VtslafsPdg~~LaSgs~DGtV~-IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~ 147 (568)
+. ...+..|.. .+.+++|+ +++.|++++.+..|. +||+.+++......+...+..++|+|||++|++++.++.|+
T Consensus 327 ~~--~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~ 403 (1045)
T 1k32_A 327 TY--VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIM 403 (1045)
T ss_dssp SB--EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSEEE
T ss_pred Cc--eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCeEE
Confidence 66 445677777 89999999 999999999988899 99998877655556778899999999999999999999999
Q ss_pred EEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 148 FYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 148 VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
+||+.++. ...... .|...+.+++|+|+|++|+.+....+... ....++.|++||+..
T Consensus 404 ~~d~~tg~-~~~~~~--~~~~~v~~~~~SpDG~~la~~~~~~~~~~--~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 404 TVDLETGK-PTVIER--SREAMITDFTISDNSRFIAYGFPLKHGET--DGYVMQAIHVYDMEG 461 (1045)
T ss_dssp EEETTTCC-EEEEEE--CSSSCCCCEEECTTSCEEEEEEEECSSTT--CSCCEEEEEEEETTT
T ss_pred EEECCCCc-eEEecc--CCCCCccceEECCCCCeEEEEecCccccc--cCCCCCeEEEEECCC
Confidence 99998874 334443 68888999999999998876632110000 001235788888764
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.52 E-value=1.8e-12 Score=132.90 Aligned_cols=196 Identities=8% Similarity=0.063 Sum_probs=130.9
Q ss_pred CccCCCCEEEEEECC----CcEEEEECCC--Cce--eEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc
Q 008356 1 MYNCKDEHLASISLS----GDLILHNLAS--GAK--AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (568)
Q Consensus 1 afSpdG~~LasGs~D----G~V~VWDl~t--g~~--v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~ 72 (568)
+|+|||++|++++.+ +.|.+|++.. ++. +..+.. +......+++ +++.++++...++.|.+|++.....
T Consensus 56 ~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~-~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~ 132 (361)
T 3scy_A 56 IPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKT-MGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGA 132 (361)
T ss_dssp EECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEEC-SSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSC
T ss_pred EECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEecc-CCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCc
Confidence 489999999999876 7999998865 443 233332 3344556777 7774455555789999999965431
Q ss_pred e--e-E--Eec--------cCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEECCCCc-------e-------eeEeecCCC
Q 008356 73 K--V-S--WLK--------QHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPGSRR-------P-------SSCITYEAP 124 (568)
Q Consensus 73 ~--v-~--~l~--------~H~~~VtslafsPdg~~LaSgs-~DGtV~IWDlrt~~-------~-------v~~~~h~~~ 124 (568)
. . . ... .+...+.+++|+|++++|++++ .++.|++|++.... . .........
T Consensus 133 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 212 (361)
T 3scy_A 133 LLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSG 212 (361)
T ss_dssp BCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCC
T ss_pred CcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCC
Confidence 1 1 1 111 1233468899999999776655 58899999887543 1 112245667
Q ss_pred eEEEEEecCCCEEEEEE-cCCeEEEEECCCCCC-ceEEEe-ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecC-C
Q 008356 125 FSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQ-PLTVLR-ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAV-G 200 (568)
Q Consensus 125 ItsLafsPdg~~LasGs-~DG~V~VWDlrt~~~-~v~~l~-~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~-D 200 (568)
+..++|+|+|++|+++. .++.|.+||+++... .+..+. ...+...+..++|+|+|++|+.. ... +
T Consensus 213 ~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~-----------~~~~~ 281 (361)
T 3scy_A 213 PRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYAS-----------NRLKA 281 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEE-----------ECSSS
T ss_pred CeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEE-----------CCCCC
Confidence 88999999999888877 689999999985421 111122 12334557899999988766443 233 5
Q ss_pred CcEEcCCCCC
Q 008356 201 DSILMPDPLP 210 (568)
Q Consensus 201 g~V~VWDlr~ 210 (568)
+.|.+|++.+
T Consensus 282 ~~i~v~~~~~ 291 (361)
T 3scy_A 282 DGVAIFKVDE 291 (361)
T ss_dssp CEEEEEEECT
T ss_pred CEEEEEEEcC
Confidence 7899998863
No 156
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.51 E-value=4.8e-13 Score=149.84 Aligned_cols=196 Identities=15% Similarity=0.127 Sum_probs=138.0
Q ss_pred CccCCCCEEEEEE---------------------------------CCCcEEEEECCCCceeEEeeC-CCCCcEEEEEEc
Q 008356 1 MYNCKDEHLASIS---------------------------------LSGDLILHNLASGAKAAELKD-PNEQVLRVLDYS 46 (568)
Q Consensus 1 afSpdG~~LasGs---------------------------------~DG~V~VWDl~tg~~v~~l~~-~h~~~Vs~Lafs 46 (568)
+|+|||++|++++ .+..|++||+.+++....... .+...+..++|+
T Consensus 187 ~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 266 (706)
T 2z3z_A 187 FWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWS 266 (706)
T ss_dssp EECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEEC
T ss_pred EECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEE
Confidence 3899999999987 446799999988876544332 356678999999
Q ss_pred cCCCeEEEEEeCCC-----eEEEEECCCCCceeEEec-cCCC---CeEEEEEcC--CCCEEEEEeCCCeEEEEECC-CCc
Q 008356 47 RNSRHLLVTAGDDG-----TLHLWDTTGRSPKVSWLK-QHSA---PTAGISFSS--DDKIIASVGLDKKLYTYDPG-SRR 114 (568)
Q Consensus 47 pdg~~lLaTgs~DG-----tV~VWDl~t~~~~v~~l~-~H~~---~VtslafsP--dg~~LaSgs~DGtV~IWDlr-t~~ 114 (568)
|+++ .|++++.|+ .|++||+.+++....... .+.. .+.++.|+| ++++|+++..|+.+++|++. ++.
T Consensus 267 pdg~-~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~ 345 (706)
T 2z3z_A 267 PDEN-ILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR 345 (706)
T ss_dssp TTSS-EEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC
T ss_pred CCCC-EEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC
Confidence 9998 566666554 899999988732222221 2222 346789999 99999999999988888875 455
Q ss_pred eeeEe-ecCCCeEE-EEEecCCCEEEEEEcC-C----eEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEecc
Q 008356 115 PSSCI-TYEAPFSS-LAFIDDDWILTAGTSN-G----RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETT 187 (568)
Q Consensus 115 ~v~~~-~h~~~Its-LafsPdg~~LasGs~D-G----~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ 187 (568)
.+..+ .+...+.. ++|+|+++.|+..+.+ + .|..||+.+.. ...+ .|...+.+++|+|+|++++....
T Consensus 346 ~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~--~~~l---~~~~~~~~~~~spdg~~l~~~~~ 420 (706)
T 2z3z_A 346 LIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK--TKDL---TPESGMHRTQLSPDGSAIIDIFQ 420 (706)
T ss_dssp EEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC--CEES---CCSSSEEEEEECTTSSEEEEEEE
T ss_pred EEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC--ceec---cCCCceEEEEECCCCCEEEEEec
Confidence 55555 45666766 8999999988766544 3 67777777653 2333 36677999999999887765421
Q ss_pred CCCCeEEEEecCCCcEEcCCCCC
Q 008356 188 CKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 188 ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
.. .....|++||+..
T Consensus 421 ~~--------~~p~~i~l~d~~~ 435 (706)
T 2z3z_A 421 SP--------TVPRKVTVTNIGK 435 (706)
T ss_dssp CS--------SCSCEEEEEESSS
T ss_pred CC--------CCCcEEEEEECCC
Confidence 10 1125688888754
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.51 E-value=2.8e-13 Score=148.77 Aligned_cols=189 Identities=10% Similarity=0.036 Sum_probs=133.9
Q ss_pred CccCCCCEEEEEEC-CCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeC---CCeEEEEECCC--CCcee
Q 008356 1 MYNCKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD---DGTLHLWDTTG--RSPKV 74 (568)
Q Consensus 1 afSpdG~~LasGs~-DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~---DGtV~VWDl~t--~~~~v 74 (568)
+|+|||++||.++. ||+++||++..++ ...+..++...+..+.|+|+ + +++++.. +...+||.++. .....
T Consensus 28 ~~~~DG~~la~~s~~~g~~~lw~~~~g~-~~~lt~~~~~~~~~~~~spd-~-~l~~~~~~~g~~~~~l~~~~~~~~g~~~ 104 (582)
T 3o4h_A 28 QGVVDGDKLLVVGFSEGSVNAYLYDGGE-TVKLNREPINSVLDPHYGVG-R-VILVRDVSKGAEQHALFKVNTSRPGEEQ 104 (582)
T ss_dssp EEEETTTEEEEEEEETTEEEEEEEETTE-EEECCSSCCSEECEECTTCS-E-EEEEEECSTTSCCEEEEEEETTSTTCCE
T ss_pred ecCCCCCeEEEEEccCCceeEEEEcCCC-cEeeecccccccccccCCCC-e-EEEEeccCCCCcceEEEEEeccCCCccc
Confidence 47899999999887 9999999985554 45555545467888999998 4 7887775 45556655532 22112
Q ss_pred EEeccCCCCeEEEEEcCCCCE-EEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcC----CeEEEE
Q 008356 75 SWLKQHSAPTAGISFSSDDKI-IASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSN----GRVVFY 149 (568)
Q Consensus 75 ~~l~~H~~~VtslafsPdg~~-LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~D----G~V~VW 149 (568)
.+..+. .+...+|+|+++. +++...++.+.+||+.+++......+.. .+++|+|||++|+.++.+ +.|++|
T Consensus 105 -~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~ 180 (582)
T 3o4h_A 105 -RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTS 180 (582)
T ss_dssp -ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred -cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEE
Confidence 333332 3556788887753 3344444556699999988766665444 889999999999988877 789999
Q ss_pred ECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCC--cEEcCCCCCCC
Q 008356 150 DIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD--SILMPDPLPSV 212 (568)
Q Consensus 150 Dlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg--~V~VWDlr~~~ 212 (568)
|+.++.. ..+. .|.+.+..++|+|||++|+.. ..++ .|++||+....
T Consensus 181 d~~~g~~--~~l~--~~~~~~~~~~~SpDG~~l~~~------------~~~~~~~i~~~d~~~~~ 229 (582)
T 3o4h_A 181 NLSSGGL--RVFD--SGEGSFSSASISPGMKVTAGL------------ETAREARLVTVDPRDGS 229 (582)
T ss_dssp ETTTCCC--EEEC--CSSCEEEEEEECTTSCEEEEE------------ECSSCEEEEEECTTTCC
T ss_pred cCCCCCc--eEee--cCCCccccceECCCCCEEEEc------------cCCCeeEEEEEcCCCCc
Confidence 9987742 3443 678889999999998887633 2355 78888876543
No 158
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.50 E-value=1.7e-12 Score=133.55 Aligned_cols=198 Identities=12% Similarity=0.049 Sum_probs=140.6
Q ss_pred CccCCCCEEEEEEC-CC--cEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 008356 1 MYNCKDEHLASISL-SG--DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (568)
Q Consensus 1 afSpdG~~LasGs~-DG--~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l 77 (568)
+|+|||++|+.++. +| .|.+||+.+++....... +...+..+.|+|+++ .|+.+..++.|++||+.+++. ....
T Consensus 42 ~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~-~~~~~~~~~~spdg~-~l~~~~~~~~l~~~d~~~g~~-~~~~ 118 (388)
T 3pe7_A 42 CFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEG-RGDNTFGGFLSPDDD-ALFYVKDGRNLMRVDLATLEE-NVVY 118 (388)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCS-SCBCSSSCEECTTSS-EEEEEETTTEEEEEETTTCCE-EEEE
T ss_pred cCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeC-CCCCccceEEcCCCC-EEEEEeCCCeEEEEECCCCcc-eeee
Confidence 48999999999887 66 488889988876654443 444443568999998 688888889999999998773 3334
Q ss_pred ccCCCCeEEEE--EcCCCCEEEEE----------------------eCCCeEEEEECCCCceeeEeecCCCeEEEEEec-
Q 008356 78 KQHSAPTAGIS--FSSDDKIIASV----------------------GLDKKLYTYDPGSRRPSSCITYEAPFSSLAFID- 132 (568)
Q Consensus 78 ~~H~~~Vtsla--fsPdg~~LaSg----------------------s~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsP- 132 (568)
..+...+.... +++++++++.. ..+..|++||+.+++......+...+..++|+|
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~ 198 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPY 198 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETT
T ss_pred echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCC
Confidence 44555454444 47899988743 244689999999998777777788899999999
Q ss_pred CCCEEEEEEcC------CeEEEEECCCCCCceEEEeecCCC--CCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEE
Q 008356 133 DDWILTAGTSN------GRVVFYDIRGKPQPLTVLRACSSS--EAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSIL 204 (568)
Q Consensus 133 dg~~LasGs~D------G~V~VWDlrt~~~~v~~l~~~~h~--~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~ 204 (568)
+|+.|+....+ ..|.++|+.+.. ...+. .+. ..+..++|+|+|+.|+..+...+ ..+..|+
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~--~~~~~~~~~~~~~spdg~~l~~~~~~~~-------~~~~~l~ 267 (388)
T 3pe7_A 199 DDSTVAFCHEGPHDLVDARMWLINEDGTN--MRKVK--THAEGESCTHEFWVPDGSALVYVSYLKG-------SPDRFIY 267 (388)
T ss_dssp EEEEEEEEECSCTTTSSCSEEEEETTSCC--CEESC--CCCTTEEEEEEEECTTSSCEEEEEEETT-------CCCEEEE
T ss_pred CCCEEEEEEecCCCCCcceEEEEeCCCCc--eEEee--eCCCCcccccceECCCCCEEEEEecCCC-------CCcceEE
Confidence 99999887763 378888887653 23333 233 35788999999887755422110 0122489
Q ss_pred cCCCCCCC
Q 008356 205 MPDPLPSV 212 (568)
Q Consensus 205 VWDlr~~~ 212 (568)
+||+....
T Consensus 268 ~~d~~~g~ 275 (388)
T 3pe7_A 268 SADPETLE 275 (388)
T ss_dssp EECTTTCC
T ss_pred EEecCCCc
Confidence 99986543
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.50 E-value=1.3e-12 Score=135.40 Aligned_cols=202 Identities=12% Similarity=0.075 Sum_probs=135.1
Q ss_pred CccCCCCEEEEEECCCcEEEEECC-CCceeEEeeCCCCCcEEEEEEccCCCe-EEEEEe-------------CCCeEEEE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLA-SGAKAAELKDPNEQVLRVLDYSRNSRH-LLVTAG-------------DDGTLHLW 65 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~-tg~~v~~l~~~h~~~Vs~Lafspdg~~-lLaTgs-------------~DGtV~VW 65 (568)
+|+|+|++|++++.+ .|.+|++. +++..........+....++|+|+++. +++++. .+|.+.+|
T Consensus 46 a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~ 124 (365)
T 1jof_A 46 TFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVF 124 (365)
T ss_dssp EECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEE
T ss_pred EECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEE
Confidence 479999999999888 99999997 776654332111122345889999974 244543 68999999
Q ss_pred ECCC-CCceeEEec----cCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEECC-CCceee--Eee---cCCCeEEEEEecC
Q 008356 66 DTTG-RSPKVSWLK----QHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPG-SRRPSS--CIT---YEAPFSSLAFIDD 133 (568)
Q Consensus 66 Dl~t-~~~~v~~l~----~H~~~VtslafsPdg~~LaSgs-~DGtV~IWDlr-t~~~v~--~~~---h~~~ItsLafsPd 133 (568)
++.. ++ ....+. .+...+.+++|+|++++|+++. .++.|++||+. +++... .+. +...+..++|+|+
T Consensus 125 ~~~~~g~-~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spd 203 (365)
T 1jof_A 125 SVSETGK-LEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPT 203 (365)
T ss_dssp EECTTCC-EEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTT
T ss_pred ccCCCCc-CcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCC
Confidence 9974 33 222222 3566799999999999888776 46799999998 676432 232 3567999999999
Q ss_pred CCEEEEEEc-CCeEEEEECCC--CCCc--eEEEeec-----CCCC------CeeEEE-EccCCCeEEEeccCCCCeEEEE
Q 008356 134 DWILTAGTS-NGRVVFYDIRG--KPQP--LTVLRAC-----SSSE------AVSSLC-WQRAKPVFIDETTCKAETALLG 196 (568)
Q Consensus 134 g~~LasGs~-DG~V~VWDlrt--~~~~--v~~l~~~-----~h~~------~VtsLa-fspdg~~Las~s~ssd~~~Lls 196 (568)
|++|+++.. ++.|.+|+++. +... ...+... +|.. .+..++ |+|+|++|+......+.
T Consensus 204 g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~----- 278 (365)
T 1jof_A 204 GNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKF----- 278 (365)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESST-----
T ss_pred CCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCC-----
Confidence 999988775 78999998763 3211 1122211 1122 588999 99998876544110000
Q ss_pred ecCCCcEEcCCCCC
Q 008356 197 GAVGDSILMPDPLP 210 (568)
Q Consensus 197 ~s~Dg~V~VWDlr~ 210 (568)
...+.|.+||+..
T Consensus 279 -~~~~~i~v~~~~~ 291 (365)
T 1jof_A 279 -ELQGYIAGFKLRD 291 (365)
T ss_dssp -TSCCEEEEEEECT
T ss_pred -CCCCeEEEEEECC
Confidence 0013899998863
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.50 E-value=1.7e-13 Score=155.93 Aligned_cols=179 Identities=11% Similarity=0.123 Sum_probs=131.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCC----cEEEEEEccCCCeEEEEEeCC---------CeEEEEEC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQ----VLRVLDYSRNSRHLLVTAGDD---------GTLHLWDT 67 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~----~Vs~Lafspdg~~lLaTgs~D---------GtV~VWDl 67 (568)
+|+|||++|+++ ||.|++||+.+++....+.++... ....+.|+|||+ .|+.++.+ +.+++||+
T Consensus 23 ~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~-~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 23 RWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQ-FILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp EECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEET
T ss_pred EECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCC-EEEEEECCeeeEEEccceEEEEEEC
Confidence 488999988886 999999999999987777764422 223478999998 56666665 56789999
Q ss_pred CCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee--cCCCe-----------------EEE
Q 008356 68 TGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT--YEAPF-----------------SSL 128 (568)
Q Consensus 68 ~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~--h~~~I-----------------tsL 128 (568)
.+++ ...+..|...+..++|+|||+.|+.+. |+.|++||+.+++..+... +...+ ..+
T Consensus 100 ~~~~--~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~ 176 (740)
T 4a5s_A 100 NKRQ--LITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSAL 176 (740)
T ss_dssp TTTE--ECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCE
T ss_pred CCCc--EEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcce
Confidence 9886 445777888999999999999999885 6899999998887654331 22222 358
Q ss_pred EEecCCCEEEEEEcCC------------------------------------eEEEEECCC---CCC-ceEEEeec----
Q 008356 129 AFIDDDWILTAGTSNG------------------------------------RVVFYDIRG---KPQ-PLTVLRAC---- 164 (568)
Q Consensus 129 afsPdg~~LasGs~DG------------------------------------~V~VWDlrt---~~~-~v~~l~~~---- 164 (568)
.|+|||++|+.+..|. .|++||+.+ +.. ....+...
T Consensus 177 ~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~ 256 (740)
T 4a5s_A 177 WWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASML 256 (740)
T ss_dssp EECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHH
T ss_pred EECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCC
Confidence 9999999999875321 478899887 531 11222211
Q ss_pred CCCCCeeEEEEccCCCeEEEe
Q 008356 165 SSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 165 ~h~~~VtsLafspdg~~Las~ 185 (568)
+|...+..++|+|+|+.++..
T Consensus 257 ~~~~~~~~~~wspdg~~~~~~ 277 (740)
T 4a5s_A 257 IGDHYLCDVTWATQERISLQW 277 (740)
T ss_dssp TSCEEEEEEEEEETTEEEEEE
T ss_pred CCCeEEEEEEEeCCCeEEEEE
Confidence 267789999999998866544
No 161
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.50 E-value=2.4e-12 Score=131.69 Aligned_cols=203 Identities=11% Similarity=0.099 Sum_probs=150.7
Q ss_pred CccCCCCEEEEEECC------------------------CcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEE
Q 008356 1 MYNCKDEHLASISLS------------------------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTA 56 (568)
Q Consensus 1 afSpdG~~LasGs~D------------------------G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTg 56 (568)
+++++|+++++...+ +.|.+||..+++.+..+...+-.....|+++++++ ++++.
T Consensus 30 a~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~-l~v~d 108 (329)
T 3fvz_A 30 ALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGN-YWVTD 108 (329)
T ss_dssp EECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSC-EEEEE
T ss_pred EECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCCC-EEEEE
Confidence 468899988887766 47999999889987766544445678899999998 88888
Q ss_pred eCCCeEEEEECCCCCceeEEe---------ccCCCCeEEEEEcC-CCCEEEEEe-CCCeEEEEECCCCceeeEeec-C--
Q 008356 57 GDDGTLHLWDTTGRSPKVSWL---------KQHSAPTAGISFSS-DDKIIASVG-LDKKLYTYDPGSRRPSSCITY-E-- 122 (568)
Q Consensus 57 s~DGtV~VWDl~t~~~~v~~l---------~~H~~~VtslafsP-dg~~LaSgs-~DGtV~IWDlrt~~~v~~~~h-~-- 122 (568)
..++.|++||..+....+..+ ..+....+.++++| +++++++.+ .++.|++|| .+++.+..+.. .
T Consensus 109 ~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~ 187 (329)
T 3fvz_A 109 VALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSG 187 (329)
T ss_dssp TTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCS
T ss_pred CCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCC
Confidence 889999999987653223333 34555789999999 788888886 699999999 56666666631 1
Q ss_pred --------CCeEEEEEecC-CCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeE
Q 008356 123 --------APFSSLAFIDD-DWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETA 193 (568)
Q Consensus 123 --------~~ItsLafsPd-g~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~ 193 (568)
.....++++|+ ++++++...++.|++||.+++ +.+..+....+...+..++|+| +..++.. +..
T Consensus 188 ~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~-----g~~ 260 (329)
T 3fvz_A 188 SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK-EFVREIKHASFGRNVFAISYIP-GFLFAVN-----GKP 260 (329)
T ss_dssp SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC-CEEEEECCTTTTTCEEEEEEET-TEEEEEE-----CCC
T ss_pred CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC-cEEEEEeccccCCCcceeeecC-CEEEEeC-----CCE
Confidence 23889999998 777777778999999999855 3445554445677899999999 4333332 234
Q ss_pred EEEecCCCcEEcCCCCCCC
Q 008356 194 LLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 194 Lls~s~Dg~V~VWDlr~~~ 212 (568)
+++...+..|++||+....
T Consensus 261 ~v~~~~~~~v~~~~~~~g~ 279 (329)
T 3fvz_A 261 YFGDQEPVQGFVMNFSSGE 279 (329)
T ss_dssp CTTCSCCCCEEEEETTTCC
T ss_pred EeccCCCcEEEEEEcCCCe
Confidence 4555557789999976544
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.49 E-value=1.9e-13 Score=150.20 Aligned_cols=184 Identities=16% Similarity=0.135 Sum_probs=133.7
Q ss_pred CccCCCCEEEEEEC---CCcEEEEECCC---CceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCcee
Q 008356 1 MYNCKDEHLASISL---SGDLILHNLAS---GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (568)
Q Consensus 1 afSpdG~~LasGs~---DG~V~VWDl~t---g~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v 74 (568)
+|+|| ++++++.. +....||.+.. +... .+.. ...+...+|+++++.++++...++.+.+||+.+++ .
T Consensus 71 ~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~--~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~--~ 144 (582)
T 3o4h_A 71 HYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEA--VKPMRILSGVDTGEAVVFTGATEDRVALYALDGGG--L 144 (582)
T ss_dssp CTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTT--SCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTE--E
T ss_pred cCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccC--CCCceeeeeCCCCCeEEEEecCCCCceEEEccCCc--E
Confidence 58888 77777765 45556655432 3322 4432 22344678999987666666666666699998776 2
Q ss_pred EEeccCCCCeEEEEEcCCCCEEEEEeCC----CeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCC--eEEE
Q 008356 75 SWLKQHSAPTAGISFSSDDKIIASVGLD----KKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNG--RVVF 148 (568)
Q Consensus 75 ~~l~~H~~~VtslafsPdg~~LaSgs~D----GtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG--~V~V 148 (568)
..+..+.. .+++|+|||++|++++.+ +.|++||+.+++......+...+..++|+|||++|+++..++ .|++
T Consensus 145 ~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~ 222 (582)
T 3o4h_A 145 RELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREARLVT 222 (582)
T ss_dssp EEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEE
T ss_pred EEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeEEEE
Confidence 33333333 889999999999988877 789999999988776667888899999999999999888888 8999
Q ss_pred EECCCCCCceEEEeecCCCCCeeEEE--------EccCCCeEEEeccCCCCeEEEEecCCCcEEcCCC
Q 008356 149 YDIRGKPQPLTVLRACSSSEAVSSLC--------WQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (568)
Q Consensus 149 WDlrt~~~~v~~l~~~~h~~~VtsLa--------fspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDl 208 (568)
||+.++.. . .+. .|...+..++ |+|+|. +++++..|+.+++|++
T Consensus 223 ~d~~~~~~-~-~~~--~~~~~~~~~~~~~~~~~~~spdg~------------~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 223 VDPRDGSV-E-DLE--LPSKDFSSYRPTAITWLGYLPDGR------------LAVVARREGRSAVFID 274 (582)
T ss_dssp ECTTTCCE-E-ECC--CSCSHHHHHCCSEEEEEEECTTSC------------EEEEEEETTEEEEEET
T ss_pred EcCCCCcE-E-Ecc--CCCcChhhhhhccccceeEcCCCc------------EEEEEEcCCcEEEEEE
Confidence 99998742 2 333 5666777777 999753 3444556899999998
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.49 E-value=2.2e-12 Score=133.57 Aligned_cols=198 Identities=7% Similarity=0.020 Sum_probs=132.7
Q ss_pred CccCCCCE--EEEEE-------------CCCcEEEEECC-CCceeEEeeC---CCCCcEEEEEEccCCCeEEEEEe-CCC
Q 008356 1 MYNCKDEH--LASIS-------------LSGDLILHNLA-SGAKAAELKD---PNEQVLRVLDYSRNSRHLLVTAG-DDG 60 (568)
Q Consensus 1 afSpdG~~--LasGs-------------~DG~V~VWDl~-tg~~v~~l~~---~h~~~Vs~Lafspdg~~lLaTgs-~DG 60 (568)
+|+|+|++ ++++. .+|.+.+|++. +++....+.. .+...+.+++|+|+|+ +|+++. .++
T Consensus 89 ~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~-~l~~~~~~~~ 167 (365)
T 1jof_A 89 DADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET-YLYSADLTAN 167 (365)
T ss_dssp CTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS-EEEEEETTTT
T ss_pred EECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC-EEEEEcCCCC
Confidence 58899995 44542 68999999997 4665443331 2446788999999998 455554 478
Q ss_pred eEEEEECC-CCCce-eEEec--cCCCCeEEEEEcCCCCEEEEEeC-CCeEEEEECC--CCceee---Eee---c-----C
Q 008356 61 TLHLWDTT-GRSPK-VSWLK--QHSAPTAGISFSSDDKIIASVGL-DKKLYTYDPG--SRRPSS---CIT---Y-----E 122 (568)
Q Consensus 61 tV~VWDl~-t~~~~-v~~l~--~H~~~VtslafsPdg~~LaSgs~-DGtV~IWDlr--t~~~v~---~~~---h-----~ 122 (568)
.|++||+. +++.. +..+. .|...+..++|+|++++|++++. ++.|.+|++. +++... .+. . .
T Consensus 168 ~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 247 (365)
T 1jof_A 168 KLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRD 247 (365)
T ss_dssp EEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBC
T ss_pred EEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcc
Confidence 99999998 55422 22232 24667999999999999888775 7899999765 455421 221 1 1
Q ss_pred C------CeEEEE-EecCCCEEEEEEcC-C-----eEEEEECCCCCCceEEEe-ecCCCCCeeEEEEcc---CCCeEEEe
Q 008356 123 A------PFSSLA-FIDDDWILTAGTSN-G-----RVVFYDIRGKPQPLTVLR-ACSSSEAVSSLCWQR---AKPVFIDE 185 (568)
Q Consensus 123 ~------~ItsLa-fsPdg~~LasGs~D-G-----~V~VWDlrt~~~~v~~l~-~~~h~~~VtsLafsp---dg~~Las~ 185 (568)
. .+..++ |+|||++|+++..+ + .|.+|+++...+...... ...+...+..++|+| +|++|+.+
T Consensus 248 ~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~ 327 (365)
T 1jof_A 248 PETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAIT 327 (365)
T ss_dssp TTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEE
T ss_pred cccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEE
Confidence 1 478999 99999998877643 2 899999963223222111 112445567889999 67665544
Q ss_pred ccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 186 TTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 186 s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
...++.|.+|++..
T Consensus 328 -----------~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 328 -----------DDQEGWLEIYRWKD 341 (365)
T ss_dssp -----------CSSSCEEEEEEEET
T ss_pred -----------EcCCCeEEEEEEch
Confidence 22357889998754
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.48 E-value=9.3e-12 Score=123.33 Aligned_cols=189 Identities=11% Similarity=0.098 Sum_probs=136.6
Q ss_pred CCCCEEEEEEC-CCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec--cC
Q 008356 4 CKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK--QH 80 (568)
Q Consensus 4 pdG~~LasGs~-DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~--~H 80 (568)
++++++++... ++.|++|| .+++.+..+...+...+..++++++++ ++++...++.|++||..... +..+. .+
T Consensus 87 ~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~--~~~~~~~~~ 162 (286)
T 1q7f_A 87 NSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNGNV--LHKFGCSKH 162 (286)
T ss_dssp TTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTSCE--EEEEECTTT
T ss_pred CCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCCCE--EEEeCCCCc
Confidence 45555554433 78999999 577777777554556678999999997 77777788999999976443 33332 45
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeec---CCCeEEEEEecCCCEEEEEEcCC-eEEEEECCCCCC
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY---EAPFSSLAFIDDDWILTAGTSNG-RVVFYDIRGKPQ 156 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h---~~~ItsLafsPdg~~LasGs~DG-~V~VWDlrt~~~ 156 (568)
...+.+++++++++++++...++.|++||.. ++.+..+.. ...+..++++++|+++++...++ .|.+||....
T Consensus 163 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~-- 239 (286)
T 1q7f_A 163 LEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ-- 239 (286)
T ss_dssp CSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC--
T ss_pred cCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC--
Confidence 5678999999999988888889999999974 455555532 25789999999999888887776 9999996543
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 157 ~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
.+..+........+.+++++++|+ ++++ +.|+.|++|++....
T Consensus 240 ~~~~~~~~~~~~~~~~i~~~~~g~------------l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 240 LISALESKVKHAQCFDVALMDDGS------------VVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEEEEEESSCCSCEEEEEEETTTE------------EEEE-ETTTEEEEEECSCCC
T ss_pred EEEEEcccCCCCcceeEEECCCCc------------EEEE-CCCCeEEEEEccccc
Confidence 344444333334577899988643 4444 348999999876543
No 165
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.47 E-value=1.7e-13 Score=154.07 Aligned_cols=178 Identities=16% Similarity=0.159 Sum_probs=128.5
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCC---cEEEEEEccCCCeEEEEEeC---------CCeEEEEECC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQ---VLRVLDYSRNSRHLLVTAGD---------DGTLHLWDTT 68 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~---~Vs~Lafspdg~~lLaTgs~---------DGtV~VWDl~ 68 (568)
+|+|+|++++ .+.|+.|++||+.+++....+.. +.. .+.+++|+|||+ +|+.++. ++.|++||+.
T Consensus 22 ~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~SpDg~-~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 22 NWISGQEYLH-QSADNNIVLYNIETGQSYTILSN-RTMKSVNASNYGLSPDRQ-FVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp EESSSSEEEE-ECTTSCEEEEESSSCCEEEEECH-HHHHTTTCSEEEECTTSS-EEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred EECCCCeEEE-EcCCCCEEEEEcCCCcEEEEEcc-ccccccceeeEEECCCCC-eEEEEecCceeEEeecceEEEEEECC
Confidence 4889996554 55799999999999887766653 222 377899999998 5666655 7899999998
Q ss_pred CCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe--ecCCCe-----------------EEEE
Q 008356 69 GRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPF-----------------SSLA 129 (568)
Q Consensus 69 t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~--~h~~~I-----------------tsLa 129 (568)
+++.. ........+..++|+|||+.|+.+. ++.|++||+.+++..... .+...| .+++
T Consensus 99 ~g~~~--~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~ 175 (719)
T 1z68_A 99 NGEFV--RGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALW 175 (719)
T ss_dssp TTEEC--CSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEE
T ss_pred CCccc--cceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEE
Confidence 87631 0011235689999999999999886 789999999988765443 222212 4899
Q ss_pred EecCCCEEEEEEcCC----------------------------------eEEEEECCCCCCc-eEEEe----ecCCCCCe
Q 008356 130 FIDDDWILTAGTSNG----------------------------------RVVFYDIRGKPQP-LTVLR----ACSSSEAV 170 (568)
Q Consensus 130 fsPdg~~LasGs~DG----------------------------------~V~VWDlrt~~~~-v~~l~----~~~h~~~V 170 (568)
|+|||++|++++.|. .|++||+.+.... ...+. ..+|...+
T Consensus 176 wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (719)
T 1z68_A 176 WSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYF 255 (719)
T ss_dssp ECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEE
T ss_pred ECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceE
Confidence 999999999987652 7889999876321 01111 12577889
Q ss_pred eEEEEccCCCeEEE
Q 008356 171 SSLCWQRAKPVFID 184 (568)
Q Consensus 171 tsLafspdg~~Las 184 (568)
..++|+||+++++.
T Consensus 256 ~~~~~SpD~~~~~~ 269 (719)
T 1z68_A 256 SWLTWVTDERVCLQ 269 (719)
T ss_dssp EEEEESSSSEEEEE
T ss_pred EEeEEeCCCeEEEE
Confidence 99999998765554
No 166
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.46 E-value=1.2e-13 Score=155.35 Aligned_cols=179 Identities=11% Similarity=0.081 Sum_probs=124.5
Q ss_pred CccCCCCEEEEEEC---------CCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC
Q 008356 1 MYNCKDEHLASISL---------SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS 71 (568)
Q Consensus 1 afSpdG~~LasGs~---------DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~ 71 (568)
+|+|||++|++++. ++.|++||+.+++.+.... ....+..++|+|+|+ .|+.+. |+.|++||+.+++
T Consensus 66 ~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~--l~~~~~~~~~SPDG~-~la~~~-~~~i~~~~~~~g~ 141 (719)
T 1z68_A 66 GLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNE--LPRPIQYLCWSPVGS-KLAYVY-QNNIYLKQRPGDP 141 (719)
T ss_dssp EECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSC--CCSSBCCEEECSSTT-CEEEEE-TTEEEEESSTTSC
T ss_pred EECCCCCeEEEEecCceeEEeecceEEEEEECCCCcccccee--cCcccccceECCCCC-EEEEEE-CCeEEEEeCCCCC
Confidence 48999999998876 6899999998887631111 124577799999998 465554 7899999998776
Q ss_pred ceeEEeccCCCCe-----------------EEEEEcCCCCEEEEEeCCC-------------------------------
Q 008356 72 PKVSWLKQHSAPT-----------------AGISFSSDDKIIASVGLDK------------------------------- 103 (568)
Q Consensus 72 ~~v~~l~~H~~~V-----------------tslafsPdg~~LaSgs~DG------------------------------- 103 (568)
.......++...| .+++|+|||++|++++.|.
T Consensus 142 ~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~ 221 (719)
T 1z68_A 142 PFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKN 221 (719)
T ss_dssp CEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCC
T ss_pred cEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCC
Confidence 4322222333322 4899999999999987652
Q ss_pred ---eEEEEECCCCcee---eE-----e-ecCCCeEEEEEecCCCEEEEEEcC----CeEEEEE----CCCCCCceEEEe-
Q 008356 104 ---KLYTYDPGSRRPS---SC-----I-TYEAPFSSLAFIDDDWILTAGTSN----GRVVFYD----IRGKPQPLTVLR- 162 (568)
Q Consensus 104 ---tV~IWDlrt~~~v---~~-----~-~h~~~ItsLafsPdg~~LasGs~D----G~V~VWD----lrt~~~~v~~l~- 162 (568)
.|++||+.+++.. .. + .+...+..++|+||++++++.... ..|.+|| +.++.. ..++.
T Consensus 222 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~-~~~~~~ 300 (719)
T 1z68_A 222 PVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDC-PKTQEH 300 (719)
T ss_dssp CEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEEC-CGGGEE
T ss_pred CeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCce-EEEEec
Confidence 7899999987653 21 1 366678999999998877775433 2488899 665422 11110
Q ss_pred -ecCCCCCee-----EEEEccCCCeEEE
Q 008356 163 -ACSSSEAVS-----SLCWQRAKPVFID 184 (568)
Q Consensus 163 -~~~h~~~Vt-----sLafspdg~~Las 184 (568)
...|...+. .+.|+|+|+.++.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 301 IEESRTGWAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp EEECSSSCSSSSSCCCCEECTTSSCEEE
T ss_pred ccccCCceEccccCCccEECCCCCeEEE
Confidence 025666676 8899999876544
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.38 E-value=5.5e-12 Score=143.36 Aligned_cols=178 Identities=7% Similarity=-0.016 Sum_probs=124.7
Q ss_pred ccCCCCEEEEEECC---------CcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc
Q 008356 2 YNCKDEHLASISLS---------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (568)
Q Consensus 2 fSpdG~~LasGs~D---------G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~ 72 (568)
|||||++|+.+..+ +.+.+||+.+++... +.. +...+..++|+|+|+. |+.+ .|+.|++||+.++..
T Consensus 69 ~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~-~~~~~~~~~~SPdG~~-la~~-~~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 69 ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EER-IPNNTQWVTWSPVGHK-LAYV-WNNDIYVKIEPNLPS 144 (740)
T ss_dssp ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SSC-CCTTEEEEEECSSTTC-EEEE-ETTEEEEESSTTSCC
T ss_pred ECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-ccc-CCCcceeeEECCCCCE-EEEE-ECCeEEEEECCCCce
Confidence 69999999998876 667899999887553 443 4566888999999984 5554 468999999987764
Q ss_pred eeEEeccCCCCe-----------------EEEEEcCCCCEEEEEeCCC--------------------------------
Q 008356 73 KVSWLKQHSAPT-----------------AGISFSSDDKIIASVGLDK-------------------------------- 103 (568)
Q Consensus 73 ~v~~l~~H~~~V-----------------tslafsPdg~~LaSgs~DG-------------------------------- 103 (568)
......++...+ ..+.|+|||++|+.+..|.
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~ 224 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV 224 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSC
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCc
Confidence 322223333323 3589999999999875321
Q ss_pred ----eEEEEECCC---C---ceeeEee------cCCCeEEEEEecCCCEEEEEEcC----CeEEEEECCCCCC-----ce
Q 008356 104 ----KLYTYDPGS---R---RPSSCIT------YEAPFSSLAFIDDDWILTAGTSN----GRVVFYDIRGKPQ-----PL 158 (568)
Q Consensus 104 ----tV~IWDlrt---~---~~v~~~~------h~~~ItsLafsPdg~~LasGs~D----G~V~VWDlrt~~~-----~v 158 (568)
+|++||+.+ + +...... +...+..++|+|||++++..... ..|.+||+.++.. ..
T Consensus 225 ~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~ 304 (740)
T 4a5s_A 225 NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVA 304 (740)
T ss_dssp CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGG
T ss_pred CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEE
Confidence 588899998 7 3333322 56678999999999977765432 3699999988741 11
Q ss_pred EEEeecCCCCCee-----EEEEccCCCeEE
Q 008356 159 TVLRACSSSEAVS-----SLCWQRAKPVFI 183 (568)
Q Consensus 159 ~~l~~~~h~~~Vt-----sLafspdg~~La 183 (568)
..+....|...|. .+.|+|||+.++
T Consensus 305 ~~l~~~~~~~~v~~~~~~~p~fspDG~~l~ 334 (740)
T 4a5s_A 305 RQHIEMSTTGWVGRFRPSEPHFTLDGNSFY 334 (740)
T ss_dssp GCEEEECSSSCSSSSSCCCCEECTTSSEEE
T ss_pred EEeeeccCCceEccCcCCCceEcCCCCEEE
Confidence 1121124665554 789999998766
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.35 E-value=1.5e-10 Score=114.67 Aligned_cols=188 Identities=9% Similarity=0.103 Sum_probs=133.5
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeC-----CCCCcEEEEEEc-cCCCeEEEEEeC-CCeEEEEECCCCCcee
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD-----PNEQVLRVLDYS-RNSRHLLVTAGD-DGTLHLWDTTGRSPKV 74 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~-----~h~~~Vs~Lafs-pdg~~lLaTgs~-DGtV~VWDl~t~~~~v 74 (568)
++++|+++++...++.|++||.. ++.+..+.. .+...+..+++. +++. ++++... ++.|++||... .. +
T Consensus 37 ~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~-l~v~~~~~~~~i~~~d~~g-~~-~ 112 (286)
T 1q7f_A 37 VNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGD-IIVTERSPTHQIQIYNQYG-QF-V 112 (286)
T ss_dssp ECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTE-EEEEECGGGCEEEEECTTS-CE-E
T ss_pred ECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCe-EEEEcCCCCCEEEEECCCC-cE-E
Confidence 57888888887888999999976 666666542 123457889994 5554 5555533 89999999543 32 3
Q ss_pred EEe-ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee---cCCCeEEEEEecCCCEEEEEEcCCeEEEEE
Q 008356 75 SWL-KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT---YEAPFSSLAFIDDDWILTAGTSNGRVVFYD 150 (568)
Q Consensus 75 ~~l-~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~---h~~~ItsLafsPdg~~LasGs~DG~V~VWD 150 (568)
..+ ..+...+.+++++++++++++...++.|++||.. ++.+..+. +...+..++++++|+++++...++.|++||
T Consensus 113 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~ 191 (286)
T 1q7f_A 113 RKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFN 191 (286)
T ss_dssp EEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEE
T ss_pred EEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEc
Confidence 333 2345678999999999988888888999999964 55555553 335689999999999888777899999999
Q ss_pred CCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCC-cEEcCCC
Q 008356 151 IRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD-SILMPDP 208 (568)
Q Consensus 151 lrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg-~V~VWDl 208 (568)
.... .+..+...++...+..++++++|+++++. ..++ .|.+||.
T Consensus 192 ~~g~--~~~~~~~~g~~~~p~~i~~d~~G~l~v~~------------~~~~~~i~~~~~ 236 (286)
T 1q7f_A 192 YEGQ--YLRQIGGEGITNYPIGVGINSNGEILIAD------------NHNNFNLTIFTQ 236 (286)
T ss_dssp TTCC--EEEEESCTTTSCSEEEEEECTTCCEEEEE------------CSSSCEEEEECT
T ss_pred CCCC--EEEEEccCCccCCCcEEEECCCCCEEEEe------------CCCCEEEEEECC
Confidence 8653 23334322334678899999876544443 4454 8899984
No 169
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.34 E-value=2.9e-10 Score=114.81 Aligned_cols=193 Identities=12% Similarity=0.125 Sum_probs=133.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCC----CeEEEEECCCCCceeEE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD----GTLHLWDTTGRSPKVSW 76 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~D----GtV~VWDl~t~~~~v~~ 76 (568)
+|+++|++++++..++.|++||..+++....... +...+.+++|+++++ ++++...+ +.|.+||..+.... ..
T Consensus 51 ~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~~~~-~~ 127 (333)
T 2dg1_A 51 NFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVS-HKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGDNLQ-DI 127 (333)
T ss_dssp EECTTSCEEEEETTTCEEEEECTTTCCEEEEEEC-SSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSCSCE-EE
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeC-CCCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCCEEE-EE
Confidence 3678999777888889999999988876554432 456789999999997 67766666 68999999877632 12
Q ss_pred ec--cCCCCeEEEEEcCCCCEEEEEeC------CCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEE-EcCCeEE
Q 008356 77 LK--QHSAPTAGISFSSDDKIIASVGL------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAG-TSNGRVV 147 (568)
Q Consensus 77 l~--~H~~~VtslafsPdg~~LaSgs~------DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasG-s~DG~V~ 147 (568)
+. .+...+++++++|+++++++... .+.|..||..+++..........+..++|+|++++|+++ ..++.|.
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~ 207 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLH 207 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEE
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEE
Confidence 22 34567999999999988877654 356788887766554444444568899999999866555 4678999
Q ss_pred EEECCCCCCceEE-----EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCC
Q 008356 148 FYDIRGKPQPLTV-----LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (568)
Q Consensus 148 VWDlrt~~~~v~~-----l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDl 208 (568)
+||++........ .........+..++++++|+++ ++...++.|.+||.
T Consensus 208 ~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~------------v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 208 RIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLY------------VAMYGQGRVLVFNK 261 (333)
T ss_dssp EEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEE------------EEEETTTEEEEECT
T ss_pred EEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEE------------EEEcCCCEEEEECC
Confidence 9999643222221 1111111467788888866543 33344678888886
No 170
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.32 E-value=3.3e-11 Score=123.87 Aligned_cols=202 Identities=9% Similarity=-0.036 Sum_probs=132.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEE--EccCCCeEEEEE----------------------
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLD--YSRNSRHLLVTA---------------------- 56 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~La--fspdg~~lLaTg---------------------- 56 (568)
+|+|||++|+.+..++.|++||+.+++....+.. +...+.... ++++++ +++..
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~-~~~~~~~~~~~~~~dg~-~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 87 FLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV-PAEWVGYGTWVANSDCT-KLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSS-EEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec-hhhcccccceeECCCCC-eeccccccCcccccccccchhhhhhcc
Confidence 3899999999999999999999999887766654 344443333 488887 45432
Q ss_pred eCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcC-CCCEEEEEeCC------CeEEEEECCCCceeeEeecC--CCeEE
Q 008356 57 GDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSS-DDKIIASVGLD------KKLYTYDPGSRRPSSCITYE--APFSS 127 (568)
Q Consensus 57 s~DGtV~VWDl~t~~~~v~~l~~H~~~VtslafsP-dg~~LaSgs~D------GtV~IWDlrt~~~v~~~~h~--~~Its 127 (568)
..+..|++||+.+++ ...+..+...+..+.|+| +++.|+.+..+ ..|.++|+..++......+. ..+..
T Consensus 165 ~~~~~l~~~d~~~g~--~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGE--STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTH 242 (388)
T ss_dssp CCCEEEEEEETTTCC--EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEE
T ss_pred CCcceEEEEECCCCc--eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCccccc
Confidence 244789999998876 455566777899999999 99999887753 37888998776654444443 24778
Q ss_pred EEEecCCCEEEEEEc-CC----eEEEEECCCCCCceEEEeecCCCC---CeeEEEEccCCCeEEEeccCCCCeEEEEecC
Q 008356 128 LAFIDDDWILTAGTS-NG----RVVFYDIRGKPQPLTVLRACSSSE---AVSSLCWQRAKPVFIDETTCKAETALLGGAV 199 (568)
Q Consensus 128 LafsPdg~~LasGs~-DG----~V~VWDlrt~~~~v~~l~~~~h~~---~VtsLafspdg~~Las~s~ssd~~~Lls~s~ 199 (568)
++|+|||+.|+..+. ++ .|++||+.+++. ..+....++.. ....+.|+|+|+.|+..... . .......
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~--~-~~~~~~~ 318 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQD--D-SGYKIEN 318 (388)
T ss_dssp EEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-EEEEEECCEEEEEECTTSSEEEEEECCC---------------CC
T ss_pred ceECCCCCEEEEEecCCCCCcceEEEEecCCCce-EEEEcCCCceeeeecCCCCeEccCCCcceeEeee--c-cccccCC
Confidence 999999997766443 22 399999998742 12212111000 01123688888877654110 0 0011234
Q ss_pred CCcEEcCCCCC
Q 008356 200 GDSILMPDPLP 210 (568)
Q Consensus 200 Dg~V~VWDlr~ 210 (568)
+..|++||+..
T Consensus 319 ~~~i~~~d~~~ 329 (388)
T 3pe7_A 319 DPFLYVFNMKN 329 (388)
T ss_dssp CCEEEEEETTT
T ss_pred CCEEEEEeccC
Confidence 67899999765
No 171
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.32 E-value=1.3e-10 Score=115.95 Aligned_cols=187 Identities=11% Similarity=0.065 Sum_probs=132.3
Q ss_pred CccCCCC-EEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 008356 1 MYNCKDE-HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (568)
Q Consensus 1 afSpdG~-~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~ 79 (568)
+|+|+|+ +++++..++.|++||..++ ...+.. +...+.+++++++++ ++++...++.|.+||..+++.. .....
T Consensus 34 ~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~-~~~~~~~l~~~~dg~-l~v~~~~~~~i~~~d~~~g~~~-~~~~~ 108 (296)
T 3e5z_A 34 VYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMH-PSHHQNGHCLNKQGH-LIACSHGLRRLERQREPGGEWE-SIADS 108 (296)
T ss_dssp EEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEES-SCSSEEEEEECTTCC-EEEEETTTTEEEEECSTTCCEE-EEECE
T ss_pred eEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEEC-CCCCcceeeECCCCc-EEEEecCCCeEEEEcCCCCcEE-EEeec
Confidence 4789998 6777778899999999876 555554 456788999999997 6776666789999999766522 12111
Q ss_pred ----CCCCeEEEEEcCCCCEEEEE----e-------------CCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEE
Q 008356 80 ----HSAPTAGISFSSDDKIIASV----G-------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILT 138 (568)
Q Consensus 80 ----H~~~VtslafsPdg~~LaSg----s-------------~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~La 138 (568)
....+++++++|+++++++. . ..+.|..+|.. ++......+......++|+|++++|+
T Consensus 109 ~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg~~lv 187 (296)
T 3e5z_A 109 FEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSGNLLV 187 (296)
T ss_dssp ETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTSCEEE
T ss_pred cCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCCCEEE
Confidence 12356789999999988873 2 13467777766 55444445666789999999999997
Q ss_pred EEEcCCeEEEEECCCCCCc---eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 139 AGTSNGRVVFYDIRGKPQP---LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 139 sGs~DG~V~VWDlrt~~~~---v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
+...++.|.+||+...... ...+ ..+...+.+++++++|+++++ . ++.|.+||..
T Consensus 188 ~~~~~~~i~~~~~~~~g~~~~~~~~~--~~~~~~p~~i~~d~~G~l~v~------------~--~~~v~~~~~~ 245 (296)
T 3e5z_A 188 SDTGDNATHRYCLNARGETEYQGVHF--TVEPGKTDGLRVDAGGLIWAS------------A--GDGVHVLTPD 245 (296)
T ss_dssp EETTTTEEEEEEECSSSCEEEEEEEE--CCSSSCCCSEEEBTTSCEEEE------------E--TTEEEEECTT
T ss_pred EeCCCCeEEEEEECCCCcCcCCCeEe--eCCCCCCCeEEECCCCCEEEE------------c--CCeEEEECCC
Confidence 7777899999999732222 2233 235566778888887654333 2 6778888864
No 172
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.30 E-value=1.7e-11 Score=125.67 Aligned_cols=199 Identities=11% Similarity=0.011 Sum_probs=131.9
Q ss_pred CccCCCCEEEEEECC---CcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 008356 1 MYNCKDEHLASISLS---GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (568)
Q Consensus 1 afSpdG~~LasGs~D---G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l 77 (568)
+|+|||++|+..... ..|++||+.+++... +..+.......+.|+|+++ .|+.++.++.|++||+.+++. ....
T Consensus 42 ~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~spdg~-~l~~~~~~~~l~~~d~~~~~~-~~~~ 118 (396)
T 3c5m_A 42 CFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-LTEGKGDNTFGGFISTDER-AFFYVKNELNLMKVDLETLEE-QVIY 118 (396)
T ss_dssp CBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-CCCSSCBCTTTCEECTTSS-EEEEEETTTEEEEEETTTCCE-EEEE
T ss_pred cCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-eecCCCCccccceECCCCC-EEEEEEcCCcEEEEECCCCCc-EEEE
Confidence 489999998877543 368889988776543 3332333333368999998 677778888999999988763 2233
Q ss_pred ccCCCCeEE-------------------EEEcCCCCEEEEE-----eCCCeEEEEECCCCceeeEeecCCCeEEEEEec-
Q 008356 78 KQHSAPTAG-------------------ISFSSDDKIIASV-----GLDKKLYTYDPGSRRPSSCITYEAPFSSLAFID- 132 (568)
Q Consensus 78 ~~H~~~Vts-------------------lafsPdg~~LaSg-----s~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsP- 132 (568)
..+...... +.|+|+++.++.. ..+..|++||+.+++......+...+..+.|+|
T Consensus 119 ~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~ 198 (396)
T 3c5m_A 119 TVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPF 198 (396)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETT
T ss_pred ecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCC
Confidence 333332222 3456777666544 356689999999988777777778899999999
Q ss_pred CCCEEEEEEcC------CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcC
Q 008356 133 DDWILTAGTSN------GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMP 206 (568)
Q Consensus 133 dg~~LasGs~D------G~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VW 206 (568)
++..|+..+.+ ..|.+||+.+.. ...+........+..++|+|+|++|+......+ ..++.|++|
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~-------~~~~~l~~~ 269 (396)
T 3c5m_A 199 DDSTVGFCHEGPHDLVDARMWLVNEDGSN--VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKG-------QTDRVIYKA 269 (396)
T ss_dssp EEEEEEEEECSCSSSCSCCCEEEETTSCC--CEESSCCCTTEEEEEEEECTTSSCEEEEEEETT-------TCCEEEEEE
T ss_pred CCCEEEEEecCCCCCCCceEEEEECCCCc--eeEeeccCCCccccceEECCCCCEEEEEecCCC-------CccceEEEE
Confidence 78877776543 368889987653 122221111235788999999887765522111 112448999
Q ss_pred CCCCC
Q 008356 207 DPLPS 211 (568)
Q Consensus 207 Dlr~~ 211 (568)
|+...
T Consensus 270 d~~~g 274 (396)
T 3c5m_A 270 NPETL 274 (396)
T ss_dssp CTTTC
T ss_pred ECCCC
Confidence 98653
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.29 E-value=1.4e-10 Score=118.60 Aligned_cols=192 Identities=7% Similarity=0.088 Sum_probs=135.6
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc-eeEEee--------CCCCCcEEEEEEcc-CCCeEEEEEe-CCCeEEEEECCC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGA-KAAELK--------DPNEQVLRVLDYSR-NSRHLLVTAG-DDGTLHLWDTTG 69 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~-~v~~l~--------~~h~~~Vs~Lafsp-dg~~lLaTgs-~DGtV~VWDl~t 69 (568)
+++++|+++++...++.|++||..... .+..+. ..+-.....|++++ ++. ++++.+ .++.|++||.+.
T Consensus 97 a~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~~~~g 175 (329)
T 3fvz_A 97 SIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQFSPSG 175 (329)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEEECTTS
T ss_pred EECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEEcCCC
Confidence 367899988887788999999975432 455552 12334578899999 665 777776 689999999554
Q ss_pred CCceeEEecc----------CCCCeEEEEEcCC-CCEEEEEeCCCeEEEEECCCCceeeEee---cCCCeEEEEEecCCC
Q 008356 70 RSPKVSWLKQ----------HSAPTAGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCIT---YEAPFSSLAFIDDDW 135 (568)
Q Consensus 70 ~~~~v~~l~~----------H~~~VtslafsPd-g~~LaSgs~DGtV~IWDlrt~~~v~~~~---h~~~ItsLafsPdg~ 135 (568)
.. +..+.. +......|+++|+ ++++++...++.|++||..+++.+..+. +...+..++|+| +.
T Consensus 176 ~~--~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~ 252 (329)
T 3fvz_A 176 KF--VTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GF 252 (329)
T ss_dssp CE--EEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TE
T ss_pred CE--EEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CE
Confidence 32 333322 2234899999998 7777777789999999999888887773 556788999999 33
Q ss_pred EEEE-------EEcCCeEEEEECCCCCCceEEEe-ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCC
Q 008356 136 ILTA-------GTSNGRVVFYDIRGKPQPLTVLR-ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (568)
Q Consensus 136 ~Las-------Gs~DG~V~VWDlrt~~~~v~~l~-~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWD 207 (568)
.++. ...+..|++||+.+.. .+..+. ...+...+..|+++++| .++++...++.|++|+
T Consensus 253 ~~~~~g~~~v~~~~~~~v~~~~~~~g~-~~~~~~~~~~~~~~p~~ia~~~dG------------~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 253 LFAVNGKPYFGDQEPVQGFVMNFSSGE-IIDVFKPVRKHFDMPHDIVASEDG------------TVYIGDAHTNTVWKFT 319 (329)
T ss_dssp EEEEECCCCTTCSCCCCEEEEETTTCC-EEEEECCSSSCCSSEEEEEECTTS------------EEEEEESSSCCEEEEE
T ss_pred EEEeCCCEEeccCCCcEEEEEEcCCCe-EEEEEcCCCCccCCeeEEEECCCC------------CEEEEECCCCEEEEEe
Confidence 3333 2334589999998774 333332 12466778999999965 3455556688899998
Q ss_pred CC
Q 008356 208 PL 209 (568)
Q Consensus 208 lr 209 (568)
+.
T Consensus 320 ~~ 321 (329)
T 3fvz_A 320 LT 321 (329)
T ss_dssp EE
T ss_pred CC
Confidence 64
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.28 E-value=9.3e-11 Score=130.21 Aligned_cols=149 Identities=13% Similarity=0.053 Sum_probs=108.5
Q ss_pred cCCCCE-EEEEEC-CCcEEEEECC--CCceeEEeeCC----CCCcEEEEEEccCCCeEEEEEeCC----------CeEEE
Q 008356 3 NCKDEH-LASISL-SGDLILHNLA--SGAKAAELKDP----NEQVLRVLDYSRNSRHLLVTAGDD----------GTLHL 64 (568)
Q Consensus 3 SpdG~~-LasGs~-DG~V~VWDl~--tg~~v~~l~~~----h~~~Vs~Lafspdg~~lLaTgs~D----------GtV~V 64 (568)
||||++ |+.... +..|+++++. .......+... +...+..++|+|+|+ .|+.++.| ..|++
T Consensus 87 SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~-~l~~~~~~~~~~~~~~~~~~i~~ 165 (662)
T 3azo_A 87 RPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERG-EVWCMAEEFTGEGPSDVRRFLAA 165 (662)
T ss_dssp CSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTT-EEEEEEEEECSSSTTCEEEEEEE
T ss_pred ecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCC-EEEEEEecccCCCCCCceeEEEE
Confidence 499998 776654 5667777765 20334445432 455678899999998 56666655 58999
Q ss_pred EECCC------CCceeEEec-cCCCCeEEEEEcCCCCEEEEEeCC--------CeEEEEECC-CC---ceeeEee-cCCC
Q 008356 65 WDTTG------RSPKVSWLK-QHSAPTAGISFSSDDKIIASVGLD--------KKLYTYDPG-SR---RPSSCIT-YEAP 124 (568)
Q Consensus 65 WDl~t------~~~~v~~l~-~H~~~VtslafsPdg~~LaSgs~D--------GtV~IWDlr-t~---~~v~~~~-h~~~ 124 (568)
||+.+ +. ...+. .+...+..++|+|||++|+.++.+ ..|++||+. ++ +...... +...
T Consensus 166 ~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~ 243 (662)
T 3azo_A 166 VPLDGSAAADRSA--VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEA 243 (662)
T ss_dssp EETTSTTTTCGGG--SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBC
T ss_pred EECCCCccccCCc--eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCce
Confidence 99987 44 34555 666778889999999999988755 379999999 56 4444443 4688
Q ss_pred eEEEEEecCCCEEEEEEcCC--eEEEEECCCC
Q 008356 125 FSSLAFIDDDWILTAGTSNG--RVVFYDIRGK 154 (568)
Q Consensus 125 ItsLafsPdg~~LasGs~DG--~V~VWDlrt~ 154 (568)
+..++|+|||++++++..++ .|.+||+.++
T Consensus 244 ~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~ 275 (662)
T 3azo_A 244 IAQAEWAPDGSLIVATDRTGWWNLHRVDPATG 275 (662)
T ss_dssp EEEEEECTTSCEEEEECTTSSCEEEEECTTTC
T ss_pred EcceEECCCCeEEEEECCCCCeEEEEEECCCC
Confidence 99999999999888888888 5666666554
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.27 E-value=5e-11 Score=132.42 Aligned_cols=177 Identities=10% Similarity=-0.011 Sum_probs=123.2
Q ss_pred ccCCCCEEEEE--ECCCcEEEEECCCCceeEEeeCCCCCcEE---------EEEEc--cCCCe-EEEEEeCCCeEEEEEC
Q 008356 2 YNCKDEHLASI--SLSGDLILHNLASGAKAAELKDPNEQVLR---------VLDYS--RNSRH-LLVTAGDDGTLHLWDT 67 (568)
Q Consensus 2 fSpdG~~LasG--s~DG~V~VWDl~tg~~v~~l~~~h~~~Vs---------~Lafs--pdg~~-lLaTgs~DGtV~VWDl 67 (568)
|++++-+++.. ..++...||....+.....+..+. ..+. .+.|+ ||++. ++++...+..|++|++
T Consensus 31 ~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~ 109 (662)
T 3azo_A 31 AVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAP-WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEP 109 (662)
T ss_dssp EETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTT-CCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECT
T ss_pred EcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCC-ccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcC
Confidence 45554445555 447889999965555556666533 3333 45565 99986 4444445677888887
Q ss_pred C--C-CCceeEEecc-----CCCCeEEEEEcCCCCEEEEEeCC----------CeEEEEECCC------CceeeEe-ecC
Q 008356 68 T--G-RSPKVSWLKQ-----HSAPTAGISFSSDDKIIASVGLD----------KKLYTYDPGS------RRPSSCI-TYE 122 (568)
Q Consensus 68 ~--t-~~~~v~~l~~-----H~~~VtslafsPdg~~LaSgs~D----------GtV~IWDlrt------~~~v~~~-~h~ 122 (568)
. + +. ...+.. |...+.+++|+||++.|++++.| ..|++||+.+ ++..... .+.
T Consensus 110 ~~~g~~~--~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~ 187 (662)
T 3azo_A 110 DAPGGAV--PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAH 187 (662)
T ss_dssp TSTTCCC--CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCS
T ss_pred CCCCCCC--CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCC
Confidence 6 3 44 344555 66788999999999999998877 5899999998 6655555 555
Q ss_pred CCeEEEEEecCCCEEEEEEcCC--------eEEEEECCC-CC--CceEEEeecCCCCCeeEEEEccCCCeEE
Q 008356 123 APFSSLAFIDDDWILTAGTSNG--------RVVFYDIRG-KP--QPLTVLRACSSSEAVSSLCWQRAKPVFI 183 (568)
Q Consensus 123 ~~ItsLafsPdg~~LasGs~DG--------~V~VWDlrt-~~--~~v~~l~~~~h~~~VtsLafspdg~~La 183 (568)
..+..++|+|||++|+.++.++ .|++||+.. +. ....+.. .|...+..++|+|+|++++
T Consensus 188 ~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~--~~~~~~~~~~~spdg~l~~ 257 (662)
T 3azo_A 188 RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG--GPEEAIAQAEWAPDGSLIV 257 (662)
T ss_dssp SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE--ETTBCEEEEEECTTSCEEE
T ss_pred CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC--CCCceEcceEECCCCeEEE
Confidence 6788899999999999887553 799999984 41 2223332 4567899999999877433
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.26 E-value=3e-11 Score=123.82 Aligned_cols=199 Identities=7% Similarity=-0.023 Sum_probs=131.2
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEE-------------------EEEccCCCeEEEEE----eC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRV-------------------LDYSRNSRHLLVTA----GD 58 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~-------------------Lafspdg~~lLaTg----s~ 58 (568)
|+|||++|+.+..++.|++||+.+++....... +...... +.|+|+++.+++.. ..
T Consensus 88 ~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 88 ISTDERAFFYVKNELNLMKVDLETLEEQVIYTV-DEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP 166 (396)
T ss_dssp ECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC-CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred ECCCCCEEEEEEcCCcEEEEECCCCCcEEEEec-ccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence 799999999999999999999988876655553 2222222 34567766322222 45
Q ss_pred CCeEEEEECCCCCceeEEeccCCCCeEEEEEcC-CCCEEEEEeCC------CeEEEEECCCCceeeEeec--CCCeEEEE
Q 008356 59 DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSS-DDKIIASVGLD------KKLYTYDPGSRRPSSCITY--EAPFSSLA 129 (568)
Q Consensus 59 DGtV~VWDl~t~~~~v~~l~~H~~~VtslafsP-dg~~LaSgs~D------GtV~IWDlrt~~~v~~~~h--~~~ItsLa 129 (568)
+..|++||+.+++ ...+..+...+..+.|+| +++.|+.++.+ ..|.+||+..++......+ ...+..++
T Consensus 167 ~~~l~~~d~~~g~--~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 244 (396)
T 3c5m_A 167 TCRLIKVDIETGE--LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEF 244 (396)
T ss_dssp CEEEEEEETTTCC--EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEE
T ss_pred cceEEEEECCCCc--EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceE
Confidence 6789999998876 334446777899999999 78877776643 3689999877654443332 22478899
Q ss_pred EecCCCEEEEEEcC-----CeEEEEECCCCCCceEEEeecCCCCCeeEEEEcc-CCCeEEEeccCCCCeEE------EEe
Q 008356 130 FIDDDWILTAGTSN-----GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQR-AKPVFIDETTCKAETAL------LGG 197 (568)
Q Consensus 130 fsPdg~~LasGs~D-----G~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafsp-dg~~Las~s~ssd~~~L------ls~ 197 (568)
|+|+|++|+.++.+ +.|++||+.++. ...+.. . .. .. +.|+| +|++++..... .... +..
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~-~--~~-~~-~~~s~~dg~~l~~~~~~--~p~~~~~~~~~~~ 316 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLE-NEEVMV-M--PP-CS-HLMSNFDGSLMVGDGCD--APVDVADADSYNI 316 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCC-EEEEEE-C--CS-EE-EEEECSSSSEEEEEECC--C----------CC
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCC-eEEeee-C--CC-CC-CCccCCCCceEEEecCC--cceeecccccccc
Confidence 99999988777554 459999998763 222222 1 11 23 88999 98877664211 1000 011
Q ss_pred cCCCcEEcCCCCCC
Q 008356 198 AVGDSILMPDPLPS 211 (568)
Q Consensus 198 s~Dg~V~VWDlr~~ 211 (568)
..+..|++||+...
T Consensus 317 ~~~~~i~~~d~~~~ 330 (396)
T 3c5m_A 317 ENDPFLYVLNTKAK 330 (396)
T ss_dssp CCCCEEEEEETTTT
T ss_pred CCCCcEEEEecccC
Confidence 23578999987643
No 177
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.23 E-value=8.4e-11 Score=124.94 Aligned_cols=169 Identities=8% Similarity=0.004 Sum_probs=127.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCc-----------eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGA-----------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG 69 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~-----------~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t 69 (568)
++++...++++|+.+ .+.||++.+.+ ....+. ... |+.|+| ++. +|+++ .++.|++||+..
T Consensus 44 ais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~--lp~-V~~l~f--d~~-~L~v~-~~~~l~v~dv~s 115 (388)
T 1xip_A 44 DISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKE--IPD-VIFVCF--HGD-QVLVS-TRNALYSLDLEE 115 (388)
T ss_dssp EEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEE--CTT-EEEEEE--ETT-EEEEE-ESSEEEEEESSS
T ss_pred EEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEee--CCC-eeEEEE--CCC-EEEEE-cCCcEEEEEchh
Confidence 356788899999887 56669865333 112233 344 899999 666 67777 889999999987
Q ss_pred CCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEE
Q 008356 70 RSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFY 149 (568)
Q Consensus 70 ~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VW 149 (568)
... ......|...|.++.+.+. .++++..||.|.+||+.+++... +...|+|++|+|+| +++|..||.|++|
T Consensus 116 l~~-~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg~i~~~ 187 (388)
T 1xip_A 116 LSE-FRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDRSFQSF 187 (388)
T ss_dssp TTC-EEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETTSCEEEE
T ss_pred hhc-cCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCCcEEEE
Confidence 663 4456677788998888754 38889999999999999877654 44689999999999 7889999999999
Q ss_pred ECCCCCCc-eEEEe-------ecCCCCCeeEEEEccCCCeEEEe
Q 008356 150 DIRGKPQP-LTVLR-------ACSSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 150 Dlrt~~~~-v~~l~-------~~~h~~~VtsLafspdg~~Las~ 185 (568)
+.+..... .+.+. ..+|...|.+|+|.+++.++++-
T Consensus 188 ~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 188 AWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 98876311 23331 11377889999999999988764
No 178
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.23 E-value=4.8e-10 Score=112.89 Aligned_cols=186 Identities=8% Similarity=-0.034 Sum_probs=136.2
Q ss_pred CCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC-CC
Q 008356 4 CKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH-SA 82 (568)
Q Consensus 4 pdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H-~~ 82 (568)
..+++|++++.++.|++||.++|+.+..+..+....++++.+.|+|+ +|+ +.++.|+.||. +++. +..+..+ ..
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G~~-~W~~~~~~~~ 77 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DGRE-LWNIAAPAGC 77 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TSCE-EEEEECCTTC
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CCCE-EEEEcCCCCc
Confidence 35688999999999999999999999999864434678899999997 666 45788999999 5553 4445443 35
Q ss_pred CeEEEEEcCCCCEEEEEeC-CCeEEEEECCCCceeeEeecC-------CCeEEEEEecCCCEEEEEEcCCeEEEEECCCC
Q 008356 83 PTAGISFSSDDKIIASVGL-DKKLYTYDPGSRRPSSCITYE-------APFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (568)
Q Consensus 83 ~VtslafsPdg~~LaSgs~-DGtV~IWDlrt~~~v~~~~h~-------~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~ 154 (568)
.+.++.+.++++++++.+. ++.|..+|. +++.+..+... .....+++.++|++|++...++.|.+||.+ +
T Consensus 78 ~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G 155 (276)
T 3no2_A 78 EMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-G 155 (276)
T ss_dssp EEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred cccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-C
Confidence 6889999999999999887 888888886 67766665321 234566788999999999999999999998 5
Q ss_pred CCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 155 PQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 155 ~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
+ .+..+. ....+.++.+.++|+.++++ ..++.|..+|.....
T Consensus 156 ~-~~w~~~---~~~~~~~~~~~~~g~~~v~~------------~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 156 Q-LLNSVK---LSGTPFSSAFLDNGDCLVAC------------GDAHCFVQLNLESNR 197 (276)
T ss_dssp C-EEEEEE---CSSCCCEEEECTTSCEEEEC------------BTTSEEEEECTTTCC
T ss_pred C-EEEEEE---CCCCccceeEcCCCCEEEEe------------CCCCeEEEEeCcCCc
Confidence 3 333333 22456667777776665554 334556666655433
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.22 E-value=2.8e-10 Score=115.28 Aligned_cols=177 Identities=15% Similarity=0.230 Sum_probs=116.4
Q ss_pred CccCCCCEEEEEECC---C--cEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeC-----------------
Q 008356 1 MYNCKDEHLASISLS---G--DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD----------------- 58 (568)
Q Consensus 1 afSpdG~~LasGs~D---G--~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~----------------- 58 (568)
+|+|||++|+.+..+ + .|++||+.+++....... . . +..++|+|+++.+++++..
T Consensus 65 ~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~-~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (347)
T 2gop_A 65 RISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEA-K-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWF 141 (347)
T ss_dssp EECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEE-S-E-EEEEEECTTSSEEEEEEECCCC---------CCCC-
T ss_pred EECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcC-C-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceee
Confidence 489999999987754 3 488889887776554443 2 3 8889999999855554433
Q ss_pred ---------CCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCC---------eEEEEECCCCceeeEee
Q 008356 59 ---------DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDK---------KLYTYDPGSRRPSSCIT 120 (568)
Q Consensus 59 ---------DGtV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DG---------tV~IWDlrt~~~v~~~~ 120 (568)
...|++||+.+++. +..+.. . .+..+.|+|++ +++++..+. .|.++| +++......
T Consensus 142 ~g~~~~~~~~~~l~~~d~~~~~~-~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~ 215 (347)
T 2gop_A 142 DDLGFFDGEKTTFWIFDTESEEV-IEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFE 215 (347)
T ss_dssp --------CEEEEEEEETTTTEE-EEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEE
T ss_pred cCcccccCccceEEEEECCCCeE-EeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEecc
Confidence 25799999987763 133333 3 78899999999 777776542 455666 555444444
Q ss_pred cCCCeEEEEEecCCCEEEEEEcC--------CeEEEEECCCCCCceEEEeecCCCCCeeE-EEEccCCCeEEEeccCCCC
Q 008356 121 YEAPFSSLAFIDDDWILTAGTSN--------GRVVFYDIRGKPQPLTVLRACSSSEAVSS-LCWQRAKPVFIDETTCKAE 191 (568)
Q Consensus 121 h~~~ItsLafsPdg~~LasGs~D--------G~V~VWDlrt~~~~v~~l~~~~h~~~Vts-Lafspdg~~Las~s~ssd~ 191 (568)
+ ..+..+ +|+|++|+.++.+ ..|.+|| ++ +..... ..|...+.. +.|+ ++ +
T Consensus 216 ~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~-~~~~l~--~~~~~~~~~~~~~s-dg-~---------- 275 (347)
T 2gop_A 216 K-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK-EVMGIL--DEVDRGVGQAKIKD-GK-V---------- 275 (347)
T ss_dssp E-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS-CEEESS--TTCCSEEEEEEEET-TE-E----------
T ss_pred C-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC-ceEecc--ccCCcccCCccEEc-Cc-E----------
Confidence 4 455444 9999998887754 3688888 33 222222 245667775 7887 64 3
Q ss_pred eEEEEecCCCcEEcCCCC
Q 008356 192 TALLGGAVGDSILMPDPL 209 (568)
Q Consensus 192 ~~Lls~s~Dg~V~VWDlr 209 (568)
++.+..++.+++| +.
T Consensus 276 --~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 276 --YFTLFEEGSVNLY-IW 290 (347)
T ss_dssp --EEEEEETTEEEEE-EE
T ss_pred --EEEEecCCcEEEE-Ec
Confidence 3344457788888 65
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.21 E-value=6.2e-10 Score=125.74 Aligned_cols=173 Identities=10% Similarity=0.069 Sum_probs=118.0
Q ss_pred CccCCCCEEEEEECCC-----cEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCe--------------
Q 008356 1 MYNCKDEHLASISLSG-----DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT-------------- 61 (568)
Q Consensus 1 afSpdG~~LasGs~DG-----~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGt-------------- 61 (568)
+|+|||++||.+..++ .|++||+.+++.+..... + ..+..++|+||++ .|+.+..++.
T Consensus 131 ~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-~-~~~~~~~wspDg~-~l~~~~~~~~~~~~~~~~~~~~~~ 207 (710)
T 2xdw_A 131 AFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-R-VKFSCMAWTHDGK-GMFYNAYPQQDGKSDGTETSTNLH 207 (710)
T ss_dssp EECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-E-ECSCCEEECTTSS-EEEEEECCCCSSCCSSSCCCCCCC
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc-C-cccceEEEEeCCC-EEEEEEECCccccccccccccCCC
Confidence 4899999998876543 899999999887654332 1 1245689999998 4555555554
Q ss_pred --EEEEECCCCCce-eEE--eccCCCCeEEEEEcCCCCEEEEEeC-----CCeEEEEECCC------Cc--eeeEeecCC
Q 008356 62 --LHLWDTTGRSPK-VSW--LKQHSAPTAGISFSSDDKIIASVGL-----DKKLYTYDPGS------RR--PSSCITYEA 123 (568)
Q Consensus 62 --V~VWDl~t~~~~-v~~--l~~H~~~VtslafsPdg~~LaSgs~-----DGtV~IWDlrt------~~--~v~~~~h~~ 123 (568)
|++|++.+.... ... ...|...+..+.|+||+++|+.... +..|++||+.+ +. ......+..
T Consensus 208 ~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~ 287 (710)
T 2xdw_A 208 QKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE 287 (710)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS
T ss_pred CEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC
Confidence 999999776532 222 2235566889999999999988764 66899999986 42 333334444
Q ss_pred CeEEEEEecCCCEEEEEEcC----CeEEEEECCCCCC-ceEEEeecCCCC--CeeEEEEccCC
Q 008356 124 PFSSLAFIDDDWILTAGTSN----GRVVFYDIRGKPQ-PLTVLRACSSSE--AVSSLCWQRAK 179 (568)
Q Consensus 124 ~ItsLafsPdg~~LasGs~D----G~V~VWDlrt~~~-~v~~l~~~~h~~--~VtsLafspdg 179 (568)
.+.. .|+++|..|+..+.+ +.|.+||+.+... ..+.+. .|.. .+..++|.+++
T Consensus 288 ~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~ 347 (710)
T 2xdw_A 288 GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLV--PEHEKDVLEWVACVRSN 347 (710)
T ss_dssp SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--CCCSSCEEEEEEEETTT
T ss_pred cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceecc--CCCCCCeEEEEEEEcCC
Confidence 5544 588899888877653 3699999987632 123333 3333 67788887543
No 181
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.20 E-value=1.6e-09 Score=109.02 Aligned_cols=202 Identities=13% Similarity=0.052 Sum_probs=147.9
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeC-CCeEEEEECCCCCceeEEec--
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD-DGTLHLWDTTGRSPKVSWLK-- 78 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~-DGtV~VWDl~t~~~~v~~l~-- 78 (568)
+.|+|++|+ +.++.|+.||. +++.+..+..+....+.++.+.++|+ ++++.+. ++.|..+|.++.. +..+.
T Consensus 44 ~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd~~Gk~--l~~~~~~ 117 (276)
T 3no2_A 44 ATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGN-ALVAWCGHPSTILEVNMKGEV--LSKTEFE 117 (276)
T ss_dssp ECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSC-EEEEEESTTEEEEEECTTSCE--EEEEEEC
T ss_pred ECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCC-EEEEecCCCCEEEEEeCCCCE--EEEEecc
Confidence 578999888 45778999998 89999999875445788899999998 6777766 7888888864432 22222
Q ss_pred ----cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCC
Q 008356 79 ----QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (568)
Q Consensus 79 ----~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~ 154 (568)
.+......+.+.++++++++...++.|.+||.. ++.+..+.....+..+...++|++++++..+++|..+|.+++
T Consensus 118 ~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG 196 (276)
T 3no2_A 118 TGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHCFVQLNLESN 196 (276)
T ss_dssp CSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSEEEEECTTTC
T ss_pred CCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCeEEEEeCcCC
Confidence 122345567788999999999999999999998 998888876667778888999999999998899999999977
Q ss_pred CCceEEEeecC----CCCCeeEEEEccCCCeEEEeccCC-------CCeEEEEecCCCcEEcCCCCCCC
Q 008356 155 PQPLTVLRACS----SSEAVSSLCWQRAKPVFIDETTCK-------AETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 155 ~~~v~~l~~~~----h~~~VtsLafspdg~~Las~s~ss-------d~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
+. +..+.... ....+..+...++|..+++..... +...++--..++.| +|......
T Consensus 197 ~~-~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~-~W~~~~~~ 263 (276)
T 3no2_A 197 RI-VRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKV-VWQLNDKV 263 (276)
T ss_dssp CE-EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBE-EEEECCTT
T ss_pred cE-EEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCE-EEEecCcc
Confidence 43 33332111 123378889999999988873211 23345555557777 77655433
No 182
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.19 E-value=1.8e-09 Score=105.19 Aligned_cols=190 Identities=8% Similarity=0.025 Sum_probs=133.4
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~ 81 (568)
+.++|+++++.. ++.|.+||..... ...+.......+..+++.++++ ++++...++.|.+|+..+... ........
T Consensus 74 ~~~~g~l~v~~~-~~~i~~~d~~~~~-~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~ 149 (270)
T 1rwi_B 74 VDGAGTVYVTDF-NNRVVTLAAGSNN-QTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQ-TVLPFTGL 149 (270)
T ss_dssp ECTTCCEEEEET-TTEEEEECTTCSC-CEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSC-EECCCCSC
T ss_pred ECCCCCEEEEcC-CCEEEEEeCCCce-EeeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCcee-EeeccccC
Confidence 567888555544 8899999976543 3334322335678899999987 777777789999997655442 22222333
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEE
Q 008356 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTV 160 (568)
Q Consensus 82 ~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~ 160 (568)
..+.+++++++++++++...++.|.+||.......... .....+..++++++|+++++...++.|.+||...... ..
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~--~~ 227 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS--TV 227 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC--EE
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc--ee
Confidence 46789999999997777777889999998876654332 2336789999999997777777788999999976532 22
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 161 l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
.. ..+...+.+++++++|+ ++++...++.|+++++..
T Consensus 228 ~~-~~~~~~p~~i~~~~~g~------------l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 228 LP-FTGLNTPLAVAVDSDRT------------VYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp CC-CCSCSCEEEEEECTTCC------------EEEEEGGGTEEEEECCCG
T ss_pred ec-cCCCCCceeEEECCCCC------------EEEEECCCCEEEEEcCCC
Confidence 11 13335688999988654 445556689999998754
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.18 E-value=1.3e-09 Score=113.64 Aligned_cols=189 Identities=6% Similarity=0.048 Sum_probs=117.8
Q ss_pred CccCCCCEEEEEEC----------CCcEEEEECCCCceeEEeeCCC-----CCcEEEEEEccCCCeEEEEEe-C-CCeEE
Q 008356 1 MYNCKDEHLASISL----------SGDLILHNLASGAKAAELKDPN-----EQVLRVLDYSRNSRHLLVTAG-D-DGTLH 63 (568)
Q Consensus 1 afSpdG~~LasGs~----------DG~V~VWDl~tg~~v~~l~~~h-----~~~Vs~Lafspdg~~lLaTgs-~-DGtV~ 63 (568)
+|+|||++|+++.. ++.|.+||+.+++.+..+.... ......++|+|+++ +|+++. . ++.|.
T Consensus 56 ~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~-~l~v~n~~~~~~v~ 134 (361)
T 2oiz_A 56 QVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGK-FIVLQNASPATSIG 134 (361)
T ss_dssp EECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSS-EEEEEEESSSEEEE
T ss_pred EECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCC-EEEEECCCCCCeEE
Confidence 48999999998863 5679999999999888776421 22345689999998 555554 3 68999
Q ss_pred EEECCCCCceeEE-eccCCCCeEEEEEcCCC-CEEEEEe-----------------------------------------
Q 008356 64 LWDTTGRSPKVSW-LKQHSAPTAGISFSSDD-KIIASVG----------------------------------------- 100 (568)
Q Consensus 64 VWDl~t~~~~v~~-l~~H~~~VtslafsPdg-~~LaSgs----------------------------------------- 100 (568)
+||+.+.+. +.. +. +.. ...+.+.|++ ..+++.+
T Consensus 135 v~d~~~~~~-~~~~i~-~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 211 (361)
T 2oiz_A 135 IVDVAKGDY-VEDVTA-AAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDK 211 (361)
T ss_dssp EEETTTTEE-EEEEGG-GTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECS
T ss_pred EEECCCCcE-EEEEec-CCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccC
Confidence 999988753 333 22 111 1112233321 2333333
Q ss_pred -------CCCeEEEEECCCCcee--eEeec-----------CCCeEEEEEecCCCEEEEEEc-----------CCeEEEE
Q 008356 101 -------LDKKLYTYDPGSRRPS--SCITY-----------EAPFSSLAFIDDDWILTAGTS-----------NGRVVFY 149 (568)
Q Consensus 101 -------~DGtV~IWDlrt~~~v--~~~~h-----------~~~ItsLafsPdg~~LasGs~-----------DG~V~VW 149 (568)
.++.|.++|+...... ..+.. ......++|+|+++.++++.. .+.|.+|
T Consensus 212 ~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~vi 291 (361)
T 2oiz_A 212 DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVM 291 (361)
T ss_dssp SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEE
T ss_pred CEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEE
Confidence 3444555554432211 11100 011112789999888887654 3489999
Q ss_pred ECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCC
Q 008356 150 DIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (568)
Q Consensus 150 Dlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~ 211 (568)
|+.+.+ .+..+. .+. +.+++|+|+|++|++. .. +.|.+||+...
T Consensus 292 D~~t~~-~v~~i~--~~~--p~~ia~spdg~~l~v~------------n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 292 DTKTKQ-RVARIP--GRD--ALSMTIDQQRNLMLTL------------DG-GNVNVYDISQP 335 (361)
T ss_dssp ETTTTE-EEEEEE--CTT--CCEEEEETTTTEEEEE------------CS-SCEEEEECSSS
T ss_pred ECCCCc-EEEEEe--cCC--eeEEEECCCCCEEEEe------------CC-CeEEEEECCCC
Confidence 999873 444454 344 9999999987765443 33 88999998776
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.18 E-value=5.4e-10 Score=112.84 Aligned_cols=188 Identities=12% Similarity=0.118 Sum_probs=133.0
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+|++++..++....++.+++| .++....+.. +...+.+++|+++++ +++++..++.|++||..+++. ......+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~g~-l~~~~~~~~~i~~~d~~~~~~-~~~~~~~ 85 (333)
T 2dg1_A 12 FYSGKSNSAVPIISESELQTI---TAEPWLEISK-KGLQLEGLNFDRQGQ-LFLLDVFEGNIFKINPETKEI-KRPFVSH 85 (333)
T ss_dssp CSCGGGGCSSCCCCGGGSCEE---ECEEEEEEES-SCCCEEEEEECTTSC-EEEEETTTCEEEEECTTTCCE-EEEEECS
T ss_pred eecCCccceeEEeecccCccc---ccceeEEEec-cCccccCcEECCCCC-EEEEECCCCEEEEEeCCCCcE-EEEeeCC
Confidence 367777767666778888888 3455556665 344568899999987 788888899999999987763 2233356
Q ss_pred CCCeEEEEEcCCCCEEEEEeCC----CeEEEEECCCCceeeEee---cCCCeEEEEEecCCCEEEEEEc------CCeEE
Q 008356 81 SAPTAGISFSSDDKIIASVGLD----KKLYTYDPGSRRPSSCIT---YEAPFSSLAFIDDDWILTAGTS------NGRVV 147 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~D----GtV~IWDlrt~~~v~~~~---h~~~ItsLafsPdg~~LasGs~------DG~V~ 147 (568)
...+.+++|+++++++++...+ +.|.+||..+++....+. ....+..++++|+|+++++... .+.|.
T Consensus 86 ~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~ 165 (333)
T 2dg1_A 86 KANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVY 165 (333)
T ss_dssp SSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred CCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEE
Confidence 6789999999999988877766 689999998877553332 3457899999999987776653 35677
Q ss_pred EEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 148 FYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 148 VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
.||..+.. . ..+. .+...+..++|+|+++++ +++...++.|.+||+.
T Consensus 166 ~~~~~~~~-~-~~~~--~~~~~~~~i~~~~dg~~l-----------~v~~~~~~~i~~~d~~ 212 (333)
T 2dg1_A 166 YVSPDFRT-V-TPII--QNISVANGIALSTDEKVL-----------WVTETTANRLHRIALE 212 (333)
T ss_dssp EECTTSCC-E-EEEE--EEESSEEEEEECTTSSEE-----------EEEEGGGTEEEEEEEC
T ss_pred EEeCCCCE-E-EEee--cCCCcccceEECCCCCEE-----------EEEeCCCCeEEEEEec
Confidence 77765542 2 2222 123457889999976544 2333446788888875
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.15 E-value=2.2e-09 Score=110.01 Aligned_cols=182 Identities=8% Similarity=0.001 Sum_probs=129.5
Q ss_pred CEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC-----
Q 008356 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS----- 81 (568)
Q Consensus 7 ~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~----- 81 (568)
++.++...++.|.+||..+++.+..+.. ......++++++++ ++++...++.|.+||..+.+. ...+....
T Consensus 55 ~lyv~~~~~~~v~viD~~t~~~~~~i~~--~~~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~-~~~i~~g~~~~~~ 130 (328)
T 3dsm_A 55 IGWIVVNNSHVIFAIDINTFKEVGRITG--FTSPRYIHFLSDEK-AYVTQIWDYRIFIINPKTYEI-TGYIECPDMDMES 130 (328)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEEC--CSSEEEEEEEETTE-EEEEEBSCSEEEEEETTTTEE-EEEEECTTCCTTT
T ss_pred EEEEEEcCCCEEEEEECcccEEEEEcCC--CCCCcEEEEeCCCe-EEEEECCCCeEEEEECCCCeE-EEEEEcCCccccC
Confidence 3344445578999999999999888863 35567899988874 666555899999999988763 33333222
Q ss_pred CCeEEEEEcCCCCEEEEEe--CCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcC----------CeEEEE
Q 008356 82 APTAGISFSSDDKIIASVG--LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSN----------GRVVFY 149 (568)
Q Consensus 82 ~~VtslafsPdg~~LaSgs--~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~D----------G~V~VW 149 (568)
.....+++ ++..|+.+. .++.|.+||+.+++.+..+........++++++|++++++..+ +.|.+|
T Consensus 131 ~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~i 208 (328)
T 3dsm_A 131 GSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRI 208 (328)
T ss_dssp CBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEE
T ss_pred CCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCceEEEE
Confidence 14556777 344555444 4889999999999988888766677889999999877776654 789999
Q ss_pred ECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 150 DIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 150 Dlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
|.++.+ ....+.. ........++|+|+++.+... ++.|.+||+..
T Consensus 209 d~~t~~-v~~~~~~-~~g~~p~~la~~~d~~~lyv~--------------~~~v~~~d~~t 253 (328)
T 3dsm_A 209 DAETFT-VEKQFKF-KLGDWPSEVQLNGTRDTLYWI--------------NNDIWRMPVEA 253 (328)
T ss_dssp ETTTTE-EEEEEEC-CTTCCCEEEEECTTSCEEEEE--------------SSSEEEEETTC
T ss_pred ECCCCe-EEEEEec-CCCCCceeEEEecCCCEEEEE--------------ccEEEEEECCC
Confidence 998763 3333331 223468899999987666554 22788888754
No 186
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.15 E-value=2.7e-09 Score=111.16 Aligned_cols=173 Identities=12% Similarity=0.076 Sum_probs=114.7
Q ss_pred CccCCCCEEEEEEC--CCcEEEEECCCCceeEE-eeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC--------
Q 008356 1 MYNCKDEHLASISL--SGDLILHNLASGAKAAE-LKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG-------- 69 (568)
Q Consensus 1 afSpdG~~LasGs~--DG~V~VWDl~tg~~v~~-l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t-------- 69 (568)
+|+|||++|+++.. ++.|.+||+.+++.+.. +.. .. ...+.+.|++...+++.+.||.+.+|++..
T Consensus 114 ~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~--~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~ 190 (361)
T 2oiz_A 114 RQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA--AG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQS 190 (361)
T ss_dssp EECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG--TT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEE
T ss_pred EECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC--CC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeec
Confidence 37899999998874 57999999999988777 542 11 112334444433445555555555555432
Q ss_pred ----------------------------------------CCcee-EEecc------C----CCCeEEEEEcCCCCEEEE
Q 008356 70 ----------------------------------------RSPKV-SWLKQ------H----SAPTAGISFSSDDKIIAS 98 (568)
Q Consensus 70 ----------------------------------------~~~~v-~~l~~------H----~~~VtslafsPdg~~LaS 98 (568)
....+ ..+.. + ......++|+|+++++++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv 270 (361)
T 2oiz_A 191 RSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYV 270 (361)
T ss_dssp ECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEE
T ss_pred cccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEE
Confidence 11000 00000 0 001112688998887776
Q ss_pred EeC-----------CCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCC-CceEEEeecCC
Q 008356 99 VGL-----------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKP-QPLTVLRACSS 166 (568)
Q Consensus 99 gs~-----------DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~-~~v~~l~~~~h 166 (568)
+.. ...|.+||+.+++.+..+.... +..++|+|+|++|+++.. +.|.+||+.+.. +.+..+ ..+
T Consensus 271 ~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i--~~~ 346 (361)
T 2oiz_A 271 FMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI--EGA 346 (361)
T ss_dssp EEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE--TTS
T ss_pred EEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe--ccC
Confidence 643 3489999999999998886556 999999999999998887 999999998862 122222 256
Q ss_pred CCCeeEEEEccCCC
Q 008356 167 SEAVSSLCWQRAKP 180 (568)
Q Consensus 167 ~~~VtsLafspdg~ 180 (568)
......++++|+|+
T Consensus 347 G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 347 AEASLQVQFHPVGG 360 (361)
T ss_dssp CSSEEEEEECCCSC
T ss_pred CCCcEEEEecCCCC
Confidence 67788999999864
No 187
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.14 E-value=1.8e-09 Score=110.55 Aligned_cols=188 Identities=9% Similarity=0.021 Sum_probs=130.8
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCceeEEeeCCCC----CcEEEEEEccCCCeEEEEEe-CCCeEEEEECCCCCceeE
Q 008356 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNE----QVLRVLDYSRNSRHLLVTAG-DDGTLHLWDTTGRSPKVS 75 (568)
Q Consensus 2 fSpdG~~LasGs-~DG~V~VWDl~tg~~v~~l~~~h~----~~Vs~Lafspdg~~lLaTgs-~DGtV~VWDl~t~~~~v~ 75 (568)
+++++ .|+++. .++.|.+||+.+++....+..... .....+++ ++..++++.. .++.|.+||..+.+. ..
T Consensus 91 ~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~-~~ 166 (328)
T 3dsm_A 91 FLSDE-KAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKV-VD 166 (328)
T ss_dssp EEETT-EEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEE-EE
T ss_pred EeCCC-eEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeE-EE
Confidence 45777 555555 789999999999988877764321 13445677 3443555544 489999999988763 33
Q ss_pred EeccCCCCeEEEEEcCCCCEEEEEeCC----------CeEEEEECCCCceeeEeec--CCCeEEEEEecCCCEEEEEEcC
Q 008356 76 WLKQHSAPTAGISFSSDDKIIASVGLD----------KKLYTYDPGSRRPSSCITY--EAPFSSLAFIDDDWILTAGTSN 143 (568)
Q Consensus 76 ~l~~H~~~VtslafsPdg~~LaSgs~D----------GtV~IWDlrt~~~v~~~~h--~~~ItsLafsPdg~~LasGs~D 143 (568)
.+.. ......+.+++++++++++..+ +.|.+||..+++....+.. ......++|+|++++|+++..
T Consensus 167 ~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~- 244 (328)
T 3dsm_A 167 ELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN- 244 (328)
T ss_dssp EEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-
T ss_pred EEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-
Confidence 3333 3346788999999877777655 7899999999987766643 347899999999999988765
Q ss_pred CeEEEEECCCCCCce-EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEe----cCCCcEEcCCCC
Q 008356 144 GRVVFYDIRGKPQPL-TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGG----AVGDSILMPDPL 209 (568)
Q Consensus 144 G~V~VWDlrt~~~~v-~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~----s~Dg~V~VWDlr 209 (568)
.|.+||+.+..... ..+. .+......++++|++. .++++. ..++.|.+||..
T Consensus 245 -~v~~~d~~t~~~~~~~~~~--~~~~~p~gi~vdp~~g-----------~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 245 -DIWRMPVEADRVPVRPFLE--FRDTKYYGLTVNPNNG-----------EVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp -SEEEEETTCSSCCSSCSBC--CCSSCEEEEEECTTTC-----------CEEEEECTTSSSEEEEEEECTT
T ss_pred -EEEEEECCCCceeeeeeec--CCCCceEEEEEcCCCC-----------eEEEEcccccccCCEEEEECCC
Confidence 89999998764211 1111 1246688999998532 334444 447888999876
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.12 E-value=3.7e-09 Score=103.02 Aligned_cols=189 Identities=12% Similarity=0.060 Sum_probs=127.0
Q ss_pred ccCCCCEEE-EEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-c
Q 008356 2 YNCKDEHLA-SISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-Q 79 (568)
Q Consensus 2 fSpdG~~La-sGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~-~ 79 (568)
++++|++++ +...++.|.+||..++... .+.......+.++++.++++ ++++.. ++.|.+||..+... ..+. .
T Consensus 31 ~~~~g~l~v~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~-l~v~~~-~~~i~~~d~~~~~~--~~~~~~ 105 (270)
T 1rwi_B 31 VDSAGNVYVTSEGMYGRVVKLATGSTGTT-VLPFNGLYQPQGLAVDGAGT-VYVTDF-NNRVVTLAAGSNNQ--TVLPFD 105 (270)
T ss_dssp ECTTCCEEEEECSSSCEEEEECC-----E-ECCCCSCCSCCCEEECTTCC-EEEEET-TTEEEEECTTCSCC--EECCCC
T ss_pred ECCCCCEEEEccCCCCcEEEecCCCcccc-eEeeCCcCCcceeEECCCCC-EEEEcC-CCEEEEEeCCCceE--eeeecC
Confidence 568888666 4367789999997554432 22222334567799999987 566555 88999999877652 2222 3
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce
Q 008356 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (568)
Q Consensus 80 H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v 158 (568)
....+.++++.++++++++...++.|.+||..+....... .....+..++++++|+++++...++.|.+||......
T Consensus 106 ~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~-- 183 (270)
T 1rwi_B 106 GLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ-- 183 (270)
T ss_dssp SCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE--
T ss_pred CcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce--
Confidence 3367899999999998888778899999987655443222 2334678999999999777777788999999887632
Q ss_pred EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 159 TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 159 ~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
.. ....+...+.+++++++|.+ +++...++.|.+||...
T Consensus 184 ~~-~~~~~~~~p~~i~~d~~g~l------------~v~~~~~~~v~~~~~~~ 222 (270)
T 1rwi_B 184 VV-LPFTDITAPWGIAVDEAGTV------------YVTEHNTNQVVKLLAGS 222 (270)
T ss_dssp EE-CCCSSCCSEEEEEECTTCCE------------EEEETTTSCEEEECTTC
T ss_pred Ee-ecccCCCCceEEEECCCCCE------------EEEECCCCcEEEEcCCC
Confidence 11 11123366888999886533 34444577888888643
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.11 E-value=1.5e-09 Score=122.43 Aligned_cols=191 Identities=12% Similarity=0.007 Sum_probs=125.2
Q ss_pred CccCCCCEEEEE-----ECCCcEEEEECCCCcee-EEeeCCCCCcEEEEEEccCCCeEEEEEeCCCe-------------
Q 008356 1 MYNCKDEHLASI-----SLSGDLILHNLASGAKA-AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGT------------- 61 (568)
Q Consensus 1 afSpdG~~LasG-----s~DG~V~VWDl~tg~~v-~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGt------------- 61 (568)
+|+|||++||.+ +.+..|++||+.+++.+ ..... . .....++|+|+|+ .|+.++.|..
T Consensus 127 ~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~-~-~~~~~~~wspDg~-~l~~~~~d~~~~~~~~~~~~~~~ 203 (695)
T 2bkl_A 127 AVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE-G-GKYATPKWTPDSK-GFYYEWLPTDPSIKVDERPGYTT 203 (695)
T ss_dssp EECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS-C-CTTCCCEECTTSS-EEEEEECCCCTTSCGGGGGGGCE
T ss_pred EECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccC-c-ccccceEEecCCC-EEEEEEecCCCCCccccCCCCCE
Confidence 489999999844 33468999999998864 21111 1 1115689999998 5666666665
Q ss_pred EEEEECCCCCce---eEEeccCCCCeEEEEEcCCCCEEEEEeCCC----eEEEEECCCCceeeEeecCCCeEEEEEecCC
Q 008356 62 LHLWDTTGRSPK---VSWLKQHSAPTAGISFSSDDKIIASVGLDK----KLYTYDPGSRRPSSCITYEAPFSSLAFIDDD 134 (568)
Q Consensus 62 V~VWDl~t~~~~---v~~l~~H~~~VtslafsPdg~~LaSgs~DG----tV~IWDlrt~~~v~~~~h~~~ItsLafsPdg 134 (568)
|++|++.+.... +.....|...+..+.|+||+++|+..+.++ .|++||..+++......+...+....+ ++|
T Consensus 204 v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g 282 (695)
T 2bkl_A 204 IRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKD 282 (695)
T ss_dssp EEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETT
T ss_pred EEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCC
Confidence 999999876522 222334556789999999999998887666 788888766666555566666666667 566
Q ss_pred CEEEEEEc----CCeEEEEECCCCCC-ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 135 WILTAGTS----NGRVVFYDIRGKPQ-PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 135 ~~LasGs~----DG~V~VWDlrt~~~-~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
. |+..+. ++.|.+||+.+... ....+....+...|..++|. + +.++++...|+..++|.+.
T Consensus 283 ~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~------------~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 283 R-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-G------------GHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp E-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-T------------TEEEEEEEETTEEEEEEEE
T ss_pred c-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-C------------CEEEEEEEECCEEEEEEEe
Confidence 6 554443 58899999987532 12233211124457777776 2 2344555557777776543
No 190
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.08 E-value=1.8e-08 Score=111.94 Aligned_cols=189 Identities=14% Similarity=0.133 Sum_probs=136.4
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC--CCCceeEEeccCCCC
Q 008356 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT--GRSPKVSWLKQHSAP 83 (568)
Q Consensus 6 G~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~--t~~~~v~~l~~H~~~ 83 (568)
+.++++...++.|.++|..+++.+..+.. ...+..+.|+|+++ ++++++.|+.|.+||+. +.+ .+..+.... .
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~~--g~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~~~t~~-~v~~i~~G~-~ 241 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLDT--GYAVHISRLSASGR-YLFVIGRDGKVNMIDLWMKEPT-TVAEIKIGS-E 241 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEEC--SSCEEEEEECTTSC-EEEEEETTSEEEEEETTSSSCC-EEEEEECCS-E
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEeC--CCCccceEECCCCC-EEEEEcCCCeEEEEECCCCCCc-EeEEEecCC-C
Confidence 34556666789999999999999988874 34567899999998 67778899999999995 554 344555433 4
Q ss_pred eEEEEEc----CCCCEEEEEe-CCCeEEEEECCCCceeeEeec------------CCCeEEEEEecCCCEEEE-EEcCCe
Q 008356 84 TAGISFS----SDDKIIASVG-LDKKLYTYDPGSRRPSSCITY------------EAPFSSLAFIDDDWILTA-GTSNGR 145 (568)
Q Consensus 84 Vtslafs----Pdg~~LaSgs-~DGtV~IWDlrt~~~v~~~~h------------~~~ItsLafsPdg~~Las-Gs~DG~ 145 (568)
...++|+ |++++++++. .++.|.++|..+.+++..+.. ...+..+..++++..+++ ...+|.
T Consensus 242 P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~ 321 (567)
T 1qks_A 242 ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK 321 (567)
T ss_dssp EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE
T ss_pred CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe
Confidence 6889999 6999887776 458999999999988877632 125778888887665444 456799
Q ss_pred EEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 146 VVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 146 V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
|.++|....... .+ ...........+.|+|+|++++.+ ...++.|.++|+....
T Consensus 322 v~~vd~~~~~~~-~v-~~i~~~~~~~d~~~~pdgr~~~va-----------~~~sn~V~ViD~~t~k 375 (567)
T 1qks_A 322 ILLVDYTDLNNL-KT-TEISAERFLHDGGLDGSHRYFITA-----------ANARNKLVVIDTKEGK 375 (567)
T ss_dssp EEEEETTCSSEE-EE-EEEECCSSEEEEEECTTSCEEEEE-----------EGGGTEEEEEETTTTE
T ss_pred EEEEecCCCccc-ee-eeeeccccccCceECCCCCEEEEE-----------eCCCCeEEEEECCCCc
Confidence 999999865322 21 112334567788999988776444 3335667777776543
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.07 E-value=5.9e-09 Score=103.88 Aligned_cols=173 Identities=11% Similarity=0.040 Sum_probs=118.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCC---CCCcEEEEEEccCCCeEEEEE----e-------------CCC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDP---NEQVLRVLDYSRNSRHLLVTA----G-------------DDG 60 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~---h~~~Vs~Lafspdg~~lLaTg----s-------------~DG 60 (568)
+|+++|+++++...++.|.+||..+++........ ....+.+++++++|+ ++++. . ..+
T Consensus 75 ~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~ 153 (296)
T 3e5z_A 75 CLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGR 153 (296)
T ss_dssp EECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSC
T ss_pred eECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCc
Confidence 36789998777666789999999888754433211 122456789999997 67763 2 134
Q ss_pred eEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC-CCce---eeEe-ecCCCeEEEEEecCCC
Q 008356 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPG-SRRP---SSCI-TYEAPFSSLAFIDDDW 135 (568)
Q Consensus 61 tV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlr-t~~~---v~~~-~h~~~ItsLafsPdg~ 135 (568)
.|..||.. +. ...+..+...++.++|+|+++.+++...++.|++||+. +++. ...+ .+...+..++++++|+
T Consensus 154 ~l~~~~~~-g~--~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~ 230 (296)
T 3e5z_A 154 WVFRLAPD-GT--LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL 230 (296)
T ss_dssp EEEEECTT-SC--EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC
T ss_pred EEEEECCC-CC--EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC
Confidence 56555554 33 44455667778999999999998777788999999997 4544 2222 2345577899999998
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEE-ccCCCeEEE
Q 008356 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCW-QRAKPVFID 184 (568)
Q Consensus 136 ~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLaf-spdg~~Las 184 (568)
++++. ++.|.+||.+.. .+..+. .+.. +.+++| .++++.|..
T Consensus 231 l~v~~--~~~v~~~~~~g~--~~~~~~--~~~~-~~~~~f~~~d~~~L~v 273 (296)
T 3e5z_A 231 IWASA--GDGVHVLTPDGD--ELGRVL--TPQT-TSNLCFGGPEGRTLYM 273 (296)
T ss_dssp EEEEE--TTEEEEECTTSC--EEEEEE--CSSC-CCEEEEESTTSCEEEE
T ss_pred EEEEc--CCeEEEECCCCC--EEEEEE--CCCC-ceeEEEECCCCCEEEE
Confidence 76666 889999998743 344444 3445 889999 466554433
No 192
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.07 E-value=1.3e-08 Score=115.01 Aligned_cols=198 Identities=10% Similarity=0.048 Sum_probs=133.8
Q ss_pred CccCCCCEEEEEECCCc----------------EEEEECCCCcee--EEeeCC-CCCcEEEEEEccCCCeEEEEEeC---
Q 008356 1 MYNCKDEHLASISLSGD----------------LILHNLASGAKA--AELKDP-NEQVLRVLDYSRNSRHLLVTAGD--- 58 (568)
Q Consensus 1 afSpdG~~LasGs~DG~----------------V~VWDl~tg~~v--~~l~~~-h~~~Vs~Lafspdg~~lLaTgs~--- 58 (568)
+|+|||+.|+.+..++. |++|++.+++.. ..+... +...+..+.|+|+|+.++++...
T Consensus 177 ~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~ 256 (710)
T 2xdw_A 177 AWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCD 256 (710)
T ss_dssp EECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSS
T ss_pred EEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCC
Confidence 48999999999988765 999999887632 223322 34456779999999955555442
Q ss_pred -CCeEEEEECCC------CCceeEEeccCCCCeEEEEEcCCCCEEEEEeCC----CeEEEEECCCCce---eeEeecCC-
Q 008356 59 -DGTLHLWDTTG------RSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD----KKLYTYDPGSRRP---SSCITYEA- 123 (568)
Q Consensus 59 -DGtV~VWDl~t------~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~D----GtV~IWDlrt~~~---v~~~~h~~- 123 (568)
+..|++||+.+ +......+..+...+.. .|+++++.|+..+.+ ..|.+||+.++.. ...+.+..
T Consensus 257 ~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 335 (710)
T 2xdw_A 257 PVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEK 335 (710)
T ss_dssp SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS
T ss_pred CccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCC
Confidence 56899999976 43224556666666655 488888887776653 3699999988742 33444433
Q ss_pred -CeEEEEEecCCCEEEEEEcCCe--EEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCC
Q 008356 124 -PFSSLAFIDDDWILTAGTSNGR--VVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVG 200 (568)
Q Consensus 124 -~ItsLafsPdg~~LasGs~DG~--V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~D 200 (568)
.+..++|.+++.++++...|+. |.+||+.++. ....+. .+.+.|..+.++++++.++... -+....
T Consensus 336 ~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~-~~~~l~--~~~~~v~~~~~s~d~~~l~~~~--------ss~~~P 404 (710)
T 2xdw_A 336 DVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGA-LLKIFP--LEVGSVVGYSGQKKDTEIFYQF--------TSFLSP 404 (710)
T ss_dssp CEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCC-EEEEEC--CCSSEEEEEECCTTCSEEEEEE--------ECSSCC
T ss_pred CeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCC-EEEecC--CCCceEEEEecCCCCCEEEEEE--------eCCCCC
Confidence 5888999987888888888885 5667775543 334444 4567788899988765544321 111236
Q ss_pred CcEEcCCCCC
Q 008356 201 DSILMPDPLP 210 (568)
Q Consensus 201 g~V~VWDlr~ 210 (568)
+.|++||+..
T Consensus 405 ~~i~~~d~~t 414 (710)
T 2xdw_A 405 GIIYHCDLTK 414 (710)
T ss_dssp CEEEEEETTS
T ss_pred CEEEEEECCC
Confidence 7788888754
No 193
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.06 E-value=7.5e-09 Score=104.65 Aligned_cols=158 Identities=12% Similarity=0.130 Sum_probs=109.4
Q ss_pred CccCCCCEEEEEECC---------------------------CcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEE
Q 008356 1 MYNCKDEHLASISLS---------------------------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLL 53 (568)
Q Consensus 1 afSpdG~~LasGs~D---------------------------G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lL 53 (568)
+|+|||+.|+.++.+ ..|++||+.+++.+..+.. . .+..+.|+|++ ++
T Consensus 110 ~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~--~~~~~~~spdg--~~ 184 (347)
T 2gop_A 110 EWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P--RFSSGIWHRDK--IV 184 (347)
T ss_dssp EECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E--TTCEEEEETTE--EE
T ss_pred eECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C--CcccccCCCCe--EE
Confidence 489999999887642 5799999988876455554 2 56778999998 67
Q ss_pred EEEeCCC-------eEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCC--------CeEEEEECCCCceeeE
Q 008356 54 VTAGDDG-------TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD--------KKLYTYDPGSRRPSSC 118 (568)
Q Consensus 54 aTgs~DG-------tV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~D--------GtV~IWDlrt~~~v~~ 118 (568)
+++..++ ...||.+++++ ...+..+ ..+..+ +|++++|+.++.+ ..|++|| +++....
T Consensus 185 ~~~~~~~~~~~~~~~~~l~~~d~~~--~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 185 VNVPHREIIPQYFKFWDIYIWEDGK--EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp EEEECCCSSCCSSCCEEEEEEETTE--EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred EEEecccccccccccccEEEeCCCc--eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 7666542 34455444333 3444444 555554 8999998887754 3788888 5554444
Q ss_pred e-ecCCCeEE-EEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEcc
Q 008356 119 I-TYEAPFSS-LAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQR 177 (568)
Q Consensus 119 ~-~h~~~Its-LafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafsp 177 (568)
. .+...+.. +.|+ ++ +++++..++.++|| +..+ +....+ .+...|.+++|++
T Consensus 258 ~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g-~~~~~~---~~~~~v~~~~~s~ 311 (347)
T 2gop_A 258 LDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDG-EIKPIA---KGRHWIMGFDVDE 311 (347)
T ss_dssp STTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESS-SEEEEE---CSSSEEEEEEESS
T ss_pred cccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCC-ceEEEe---cCCCeEEeeeeeC
Confidence 3 34566775 8999 88 88999999999999 8733 333332 4567899999988
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.06 E-value=5.9e-08 Score=95.15 Aligned_cols=187 Identities=9% Similarity=0.001 Sum_probs=130.1
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCC-CCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDP-NEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~-h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+.++|+++++...++.|..||.. ++. ..+... ....+..+++.+++. ++++...++.|.+||. ++.........+
T Consensus 64 ~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~~~~~~~~ 139 (299)
T 2z2n_A 64 ISSDGEVWFTENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIREYELPNK 139 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEEEECSST
T ss_pred ECCCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEEEecCCCC
Confidence 46788877766667889999975 443 333321 345678899999886 6777667889999998 444222223335
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeE-e-ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSC-I-TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~-~-~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v 158 (568)
...+.++++.++++++++...++.|.+||. +++.... . .....+..++++++++++++...++.|.+||. +.. .
T Consensus 140 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~--~ 215 (299)
T 2z2n_A 140 GSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE--I 215 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC--E
T ss_pred CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc--E
Confidence 567899999999988887777889999999 6655433 2 23456889999999987776667889999999 442 2
Q ss_pred EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCC
Q 008356 159 TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (568)
Q Consensus 159 ~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDl 208 (568)
..+....+...+.+++++++|+..++ ...++.|.+||.
T Consensus 216 ~~~~~~~~~~~~~~i~~~~~g~l~v~------------~~~~~~i~~~d~ 253 (299)
T 2z2n_A 216 TEFKIPTPNARPHAITAGAGIDLWFT------------EWGANKIGRLTS 253 (299)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEEEE------------ETTTTEEEEEET
T ss_pred EEEECCCCCCCceeEEECCCCCEEEe------------ccCCceEEEECC
Confidence 33332235567889999887654333 333667777775
No 195
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.06 E-value=6.8e-08 Score=94.69 Aligned_cols=188 Identities=10% Similarity=0.027 Sum_probs=129.5
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~ 81 (568)
+.++|+++++...++.|.+||.. ++............+..+++.+++. ++++...++.|..||... ......+....
T Consensus 22 ~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g-~~~~~~~~~~~ 98 (299)
T 2z2n_A 22 VSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGE-VWFTENAANKIGRITKKG-IIKEYTLPNPD 98 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTTS-CEEEEECSSTT
T ss_pred ECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCC-EEEeCCCCCeEEEECCCC-cEEEEeCCCcC
Confidence 46788876665557899999987 5543322122346688899999987 666666688999999863 31122222345
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe--ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 008356 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (568)
Q Consensus 82 ~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~--~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~ 159 (568)
..+.++++.++++++++...++.|.+||. +++..... .....+..+++.++++++++...++.|.+||. +.. +.
T Consensus 99 ~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~--~~ 174 (299)
T 2z2n_A 99 SAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGD--IT 174 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCC--EE
T ss_pred CCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCc--EE
Confidence 67999999999988888778889999998 55543322 23457899999999988777777889999998 432 22
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCC
Q 008356 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (568)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDl 208 (568)
.+....+...+.+++++++|.+. ++...++.|.+||.
T Consensus 175 ~~~~~~~~~~~~~i~~~~~g~l~------------v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 175 EFKIPTPASGPVGITKGNDDALW------------FVEIIGNKIGRITT 211 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSSEE------------EEETTTTEEEEECT
T ss_pred EeeCCCCCCcceeEEECCCCCEE------------EEccCCceEEEECC
Confidence 22222344568889998865443 33334677888876
No 196
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.00 E-value=1.1e-08 Score=116.19 Aligned_cols=188 Identities=13% Similarity=-0.004 Sum_probs=120.7
Q ss_pred CccCCCCEEEEEECC-----CcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCC--------------e
Q 008356 1 MYNCKDEHLASISLS-----GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--------------T 61 (568)
Q Consensus 1 afSpdG~~LasGs~D-----G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DG--------------t 61 (568)
+|+|||++||.+..+ ..|++||+.+++.+.... +...+..++|+|+ +. |+.+..|+ .
T Consensus 169 ~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~--~~~~~~~~~wspD-~~-l~~~~~~~~~~~~~~~~~~~~~~ 244 (741)
T 1yr2_A 169 AASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL--KWVKFSGLAWLGN-DA-LLYSRFAEPKEGQAFQALNYNQT 244 (741)
T ss_dssp EECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE--EEEESCCCEESTT-SE-EEEEECCCC--------CCCCCE
T ss_pred EECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC--CCceeccEEEECC-CE-EEEEEecCcccccccccCCCCCE
Confidence 489999999887653 359999999998765322 1111246889999 74 54444443 3
Q ss_pred EEEEECCCCCce-eEEec--cCCCCeEEEEEcCCCCEEEEEeCCC-----eEEEEECCCC--c-eeeEeecCCCeEEEEE
Q 008356 62 LHLWDTTGRSPK-VSWLK--QHSAPTAGISFSSDDKIIASVGLDK-----KLYTYDPGSR--R-PSSCITYEAPFSSLAF 130 (568)
Q Consensus 62 V~VWDl~t~~~~-v~~l~--~H~~~VtslafsPdg~~LaSgs~DG-----tV~IWDlrt~--~-~v~~~~h~~~ItsLaf 130 (568)
|++|++.+.... ..... .+...+..+.|+|||++|+....++ .|++||+.++ + ......+...+....
T Consensus 245 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~- 323 (741)
T 1yr2_A 245 VWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV- 323 (741)
T ss_dssp EEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-
T ss_pred EEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-
Confidence 999999765421 22222 3334689999999999988877544 8999999877 4 444444444454443
Q ss_pred ecCCCEEEEEEc----CCeEEEEECCCCC-CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEc
Q 008356 131 IDDDWILTAGTS----NGRVVFYDIRGKP-QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILM 205 (568)
Q Consensus 131 sPdg~~LasGs~----DG~V~VWDlrt~~-~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~V 205 (568)
.|+|+.|+..+. ++.|.+||+.+.. ....++. .+...+..++|. + +.++++...|+..++
T Consensus 324 ~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~--~~~~~l~~~~~~-~------------~~lv~~~~~dg~~~l 388 (741)
T 1yr2_A 324 DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVP--ESKDNLESVGIA-G------------NRLFASYIHDAKSQV 388 (741)
T ss_dssp EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEEC--CCSSEEEEEEEE-B------------TEEEEEEEETTEEEE
T ss_pred eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEec--CCCCeEEEEEEE-C------------CEEEEEEEECCEEEE
Confidence 488888888776 4559999988742 2223332 344456666665 2 234445555776666
Q ss_pred CCC
Q 008356 206 PDP 208 (568)
Q Consensus 206 WDl 208 (568)
|.+
T Consensus 389 ~~~ 391 (741)
T 1yr2_A 389 LAF 391 (741)
T ss_dssp EEE
T ss_pred EEE
Confidence 643
No 197
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.99 E-value=8.9e-09 Score=116.07 Aligned_cols=197 Identities=11% Similarity=0.061 Sum_probs=127.2
Q ss_pred CccCCCCEEEEEECCCc-------------EEEEECCCCce--eEEeeCC-CCCcEEEEEEccCCCeEEEEEeCC-C--e
Q 008356 1 MYNCKDEHLASISLSGD-------------LILHNLASGAK--AAELKDP-NEQVLRVLDYSRNSRHLLVTAGDD-G--T 61 (568)
Q Consensus 1 afSpdG~~LasGs~DG~-------------V~VWDl~tg~~--v~~l~~~-h~~~Vs~Lafspdg~~lLaTgs~D-G--t 61 (568)
+|+|||+.|+.++.|.. |++|++.+++. ...+... +...+..+.|+|+|+.++++...+ + .
T Consensus 174 ~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~ 253 (695)
T 2bkl_A 174 KWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSEND 253 (695)
T ss_dssp EECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEE
T ss_pred EEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceE
Confidence 48999999999988776 99999988762 2233321 334677899999998555544443 2 5
Q ss_pred EEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEe---CCCeEEEEECCCCce---eeEeec--CCCeEEEEEecC
Q 008356 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVG---LDKKLYTYDPGSRRP---SSCITY--EAPFSSLAFIDD 133 (568)
Q Consensus 62 V~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs---~DGtV~IWDlrt~~~---v~~~~h--~~~ItsLafsPd 133 (568)
|++||..++. ...+..+...+....| +++.+++... .++.|.+||+.+++. ...+.+ ...+..++|. +
T Consensus 254 l~~~~~~~~~--~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~ 329 (695)
T 2bkl_A 254 VYWKRPGEKD--FRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-G 329 (695)
T ss_dssp EEEECTTCSS--CEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-T
T ss_pred EEEEcCCCCc--eEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-C
Confidence 6666654444 4455566666777777 5555444443 257999999987753 344443 4457888888 6
Q ss_pred CCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 134 DWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 134 g~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
+.++++...|+..+||.++........+. ..+.+.|..+.++++++.++.. .-+....+.|++||+..
T Consensus 330 ~~lv~~~~~dg~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~--------~ss~~~P~~v~~~d~~~ 397 (695)
T 2bkl_A 330 GHLSLEYLKDATSEVRVATLKGKPVRTVQ-LPGVGAASNLMGLEDLDDAYYV--------FTSFTTPRQIYKTSVST 397 (695)
T ss_dssp TEEEEEEEETTEEEEEEEETTCCEEEECC-CSSSSEECCCBSCTTCSEEEEE--------EEETTEEEEEEEEETTT
T ss_pred CEEEEEEEECCEEEEEEEeCCCCeeEEec-CCCCeEEEEeecCCCCCEEEEE--------EcCCCCCCEEEEEECCC
Confidence 77888889999888876652222223332 1235667778888876555433 11222357788888754
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.98 E-value=1.4e-07 Score=104.89 Aligned_cols=194 Identities=14% Similarity=0.076 Sum_probs=136.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECC--CCceeEEeeCCCCCcEEEEEEc----cCCCeEEEEEeCCCeEEEEECCCCCcee
Q 008356 1 MYNCKDEHLASISLSGDLILHNLA--SGAKAAELKDPNEQVLRVLDYS----RNSRHLLVTAGDDGTLHLWDTTGRSPKV 74 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~--tg~~v~~l~~~h~~~Vs~Lafs----pdg~~lLaTgs~DGtV~VWDl~t~~~~v 74 (568)
.|+|||++|++++.|+.|.+||+. +++.+..+.. ......++|+ |+|+.++++...++.|.|+|..+.+. +
T Consensus 203 ~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~--G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~-~ 279 (567)
T 1qks_A 203 RLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI--GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP-K 279 (567)
T ss_dssp EECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC--CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE-E
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec--CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE-E
Confidence 379999999999999999999996 8888888874 3345679999 69996666666789999999988774 3
Q ss_pred EEecc----------CCC-CeEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcee--eEeecCCCeEEEEEecCCCEEEEE
Q 008356 75 SWLKQ----------HSA-PTAGISFSSDDK-IIASVGLDKKLYTYDPGSRRPS--SCITYEAPFSSLAFIDDDWILTAG 140 (568)
Q Consensus 75 ~~l~~----------H~~-~VtslafsPdg~-~LaSgs~DGtV~IWDlrt~~~v--~~~~h~~~ItsLafsPdg~~LasG 140 (568)
..+.. |.. .+..+..++++. +++....+|.|.++|....+.+ ..+........+.|+|++++|+++
T Consensus 280 ~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va 359 (567)
T 1qks_A 280 KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITA 359 (567)
T ss_dssp EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEE
T ss_pred EEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEE
Confidence 33321 222 678888888654 4556667899999999876433 334456667889999999998776
Q ss_pred E-cCCeEEEEECCCCCCceEEEee---cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEec-CCCcEEcCCCCC
Q 008356 141 T-SNGRVVFYDIRGKPQPLTVLRA---CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGA-VGDSILMPDPLP 210 (568)
Q Consensus 141 s-~DG~V~VWDlrt~~~~v~~l~~---~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s-~Dg~V~VWDlr~ 210 (568)
. .++.|.++|+.+.+ ....+.. ..|.+....+ ++|++ +.++++.. .++.|.++|..+
T Consensus 360 ~~~sn~V~ViD~~t~k-l~~~i~vgg~~Phpg~g~~~-~~p~~-----------g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 360 ANARNKLVVIDTKEGK-LVAIEDTGGQTPHPGRGANF-VHPTF-----------GPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp EGGGTEEEEEETTTTE-EEEEEECSSSSBCCTTCEEE-EETTT-----------EEEEEEEBSSSSEEEEEECCT
T ss_pred eCCCCeEEEEECCCCc-EEEEEeccCcCCCCccceee-ECCCC-----------CcEEEeCCCCCCeEEEecCCC
Confidence 6 57899999999873 3343432 1243322222 46642 23333333 368899998876
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.96 E-value=3.9e-08 Score=97.69 Aligned_cols=191 Identities=13% Similarity=0.153 Sum_probs=125.7
Q ss_pred CccCCCCEEEE-------EECCCcEEEEECCCCceeEEee---CCCCCcEEEEEEccC-CCeEEEEEeCCCeEEEEECCC
Q 008356 1 MYNCKDEHLAS-------ISLSGDLILHNLASGAKAAELK---DPNEQVLRVLDYSRN-SRHLLVTAGDDGTLHLWDTTG 69 (568)
Q Consensus 1 afSpdG~~Las-------Gs~DG~V~VWDl~tg~~v~~l~---~~h~~~Vs~Lafspd-g~~lLaTgs~DGtV~VWDl~t 69 (568)
+|.++|+++++ +..++.|.+||..+++...... ..+...+..++++++ ++ +++ +..++.|.+||..
T Consensus 24 ~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v-~~~~~~l~~~d~~- 100 (314)
T 1pjx_A 24 VFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFV-ADMRLGLLVVQTD- 100 (314)
T ss_dssp EECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEE-EETTTEEEEEETT-
T ss_pred eECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEE-EECCCCEEEEeCC-
Confidence 36788887777 5678899999988877543221 012345788999998 64 444 4444579999988
Q ss_pred CCceeEEe-cc-----CCCCeEEEEEcCCCCEEEEEeCC---------------CeEEEEECCCCceeeEeecCCCeEEE
Q 008356 70 RSPKVSWL-KQ-----HSAPTAGISFSSDDKIIASVGLD---------------KKLYTYDPGSRRPSSCITYEAPFSSL 128 (568)
Q Consensus 70 ~~~~v~~l-~~-----H~~~VtslafsPdg~~LaSgs~D---------------GtV~IWDlrt~~~v~~~~h~~~ItsL 128 (568)
++ ...+ .. ....++++++.++++++++...+ +.|..||.. ++.............+
T Consensus 101 g~--~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i 177 (314)
T 1pjx_A 101 GT--FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGI 177 (314)
T ss_dssp SC--EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEE
T ss_pred CC--EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceE
Confidence 54 2323 21 12458899999999888777655 578888876 5554444445567899
Q ss_pred EEe----cCCCEEEEE-EcCCeEEEEECCCCCCc--eEEEee-cCCC-CCeeEEEEccCCCeEEEeccCCCCeEEEEecC
Q 008356 129 AFI----DDDWILTAG-TSNGRVVFYDIRGKPQP--LTVLRA-CSSS-EAVSSLCWQRAKPVFIDETTCKAETALLGGAV 199 (568)
Q Consensus 129 afs----Pdg~~LasG-s~DG~V~VWDlrt~~~~--v~~l~~-~~h~-~~VtsLafspdg~~Las~s~ssd~~~Lls~s~ 199 (568)
+|+ ++++.|+++ ..++.|.+||++..... ...+.. ..+. ..+..++++++|++++ +...
T Consensus 178 ~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v------------~~~~ 245 (314)
T 1pjx_A 178 AVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLV------------ANWG 245 (314)
T ss_dssp EEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEE------------EEET
T ss_pred EEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEE------------EEcC
Confidence 999 999766655 46789999998621111 112221 1233 5678888888765443 3334
Q ss_pred CCcEEcCCCC
Q 008356 200 GDSILMPDPL 209 (568)
Q Consensus 200 Dg~V~VWDlr 209 (568)
++.|.+||..
T Consensus 246 ~~~i~~~d~~ 255 (314)
T 1pjx_A 246 SSHIEVFGPD 255 (314)
T ss_dssp TTEEEEECTT
T ss_pred CCEEEEEcCC
Confidence 7788999875
No 200
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.95 E-value=7.6e-08 Score=95.61 Aligned_cols=190 Identities=15% Similarity=0.170 Sum_probs=123.8
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEE-eeC---CCCCcEEEEEEccCCCeEEEEEeCC---------------CeE
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAE-LKD---PNEQVLRVLDYSRNSRHLLVTAGDD---------------GTL 62 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~-l~~---~h~~~Vs~Lafspdg~~lLaTgs~D---------------GtV 62 (568)
+++++..|.++..++.|.+||.. ++.... ... .....+.++++.++++ ++++...+ +.|
T Consensus 78 ~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l 155 (314)
T 1pjx_A 78 CDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSI 155 (314)
T ss_dssp ECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEE
T ss_pred EecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeE
Confidence 46672344445555579999987 665432 221 1123477899999987 66665544 567
Q ss_pred EEEECCCCCceeEEeccCCCCeEEEEEc----CCCCEEEEE-eCCCeEEEEECC-CCcee-----eEee-cC-CCeEEEE
Q 008356 63 HLWDTTGRSPKVSWLKQHSAPTAGISFS----SDDKIIASV-GLDKKLYTYDPG-SRRPS-----SCIT-YE-APFSSLA 129 (568)
Q Consensus 63 ~VWDl~t~~~~v~~l~~H~~~Vtslafs----Pdg~~LaSg-s~DGtV~IWDlr-t~~~v-----~~~~-h~-~~ItsLa 129 (568)
..||.. ++ ...+..+......++|+ ++++.|+.+ ..++.|.+||+. +++.. ..+. +. ..+..++
T Consensus 156 ~~~~~~-g~--~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~ 232 (314)
T 1pjx_A 156 YCFTTD-GQ--MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMD 232 (314)
T ss_dssp EEECTT-SC--EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEE
T ss_pred EEECCC-CC--EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceE
Confidence 777765 33 23333344557899999 998766555 567899999986 44321 1121 22 5578999
Q ss_pred EecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 130 FIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 130 fsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
++++|+++++...++.|.+||.++.. ....+. .+...+.+++|+++++.| +++...++.|..||+.
T Consensus 233 ~d~~G~l~v~~~~~~~i~~~d~~~g~-~~~~~~--~~~~~~~~i~~~~dg~~l-----------~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 233 FDEDNNLLVANWGSSHIEVFGPDGGQ-PKMRIR--CPFEKPSNLHFKPQTKTI-----------FVTEHENNAVWKFEWQ 298 (314)
T ss_dssp EBTTCCEEEEEETTTEEEEECTTCBS-CSEEEE--CSSSCEEEEEECTTSSEE-----------EEEETTTTEEEEEECS
T ss_pred ECCCCCEEEEEcCCCEEEEEcCCCCc-EeEEEe--CCCCCceeEEECCCCCEE-----------EEEeCCCCeEEEEeCC
Confidence 99999988888888999999998543 234444 345778999998876533 3334446788888765
Q ss_pred C
Q 008356 210 P 210 (568)
Q Consensus 210 ~ 210 (568)
.
T Consensus 299 ~ 299 (314)
T 1pjx_A 299 R 299 (314)
T ss_dssp S
T ss_pred C
Confidence 3
No 201
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.94 E-value=3.4e-07 Score=89.74 Aligned_cols=187 Identities=7% Similarity=-0.030 Sum_probs=127.6
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeC-CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~-~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
+.++|++.++...++.|.+||.. ++.. .+.. .....+..+++.+++. ++++...++.|..||.. ++.....+...
T Consensus 69 ~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~ 144 (300)
T 2qc5_A 69 VSSLGDIWFTENGANKIGKLSKK-GGFT-EYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIYEYDLPNK 144 (300)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEEEEECSST
T ss_pred ECCCCCEEEEecCCCeEEEECCC-CCeE-EecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEEEccCCCC
Confidence 45677766666557889999987 6543 3332 1335678899999887 67766668899999987 44222223334
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe--ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~--~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v 158 (568)
...+.++++.++++++++...++.|..||. +++..... .....+..+++.++|+++++....+.|.+||.... .
T Consensus 145 ~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g~---~ 220 (300)
T 2qc5_A 145 GSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTGE---I 220 (300)
T ss_dssp TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTCC---E
T ss_pred CCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCCc---E
Confidence 567899999999997777767889999998 55544322 23456889999999987777667788999998322 2
Q ss_pred EEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCC
Q 008356 159 TVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (568)
Q Consensus 159 ~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDl 208 (568)
..+....+...+.+++++++|+.. ++...++.|..||.
T Consensus 221 ~~~~~~~~~~~~~~i~~d~~g~l~------------v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 221 SEYDIPTPNARPHAITAGKNSEIW------------FTEWGANQIGRITN 258 (300)
T ss_dssp EEEECSSTTCCEEEEEECSTTCEE------------EEETTTTEEEEECT
T ss_pred EEEECCCCCCCceEEEECCCCCEE------------EeccCCCeEEEECC
Confidence 222222345668899998875543 33333577777776
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.94 E-value=3.7e-07 Score=89.44 Aligned_cols=188 Identities=7% Similarity=-0.054 Sum_probs=128.3
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~ 81 (568)
+.++|++.++...++.|.+||.. ++............+..+++.+++. ++++...++.|.+||.. +...........
T Consensus 27 ~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~ 103 (300)
T 2qc5_A 27 SSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGD-IWFTENGANKIGKLSKK-GGFTEYPLPQPD 103 (300)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEECSSTT
T ss_pred ECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCC-EEEEecCCCeEEEECCC-CCeEEecCCCCC
Confidence 45778877766668899999987 5544322222335678899999887 66666668899999987 442222233344
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeE-ee-cCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 008356 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSC-IT-YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (568)
Q Consensus 82 ~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~-~~-h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~ 159 (568)
..+.++++.++++++++...++.|..||.. ++.... +. ....+..+++.++++++++...++.|.+||.. .. . .
T Consensus 104 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~-~-~ 179 (300)
T 2qc5_A 104 SGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNT-GK-L-E 179 (300)
T ss_dssp CCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT-CC-E-E
T ss_pred CCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCC-Cc-E-E
Confidence 679999999999988887778899999987 554432 22 34678999999999966666667899999983 32 2 2
Q ss_pred EEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCC
Q 008356 160 VLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (568)
Q Consensus 160 ~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDl 208 (568)
.+....+...+.+++++++|.+.++ ....+.|.+||.
T Consensus 180 ~~~~~~~~~~~~~i~~d~~g~l~v~------------~~~~~~i~~~~~ 216 (300)
T 2qc5_A 180 EYPLPTNAAAPVGITSGNDGALWFV------------EIMGNKIGRITT 216 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEE------------ETTTTEEEEECT
T ss_pred EeeCCCCCCCcceEEECCCCCEEEE------------ccCCCEEEEEcC
Confidence 2332234456888998886544333 333566777775
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.85 E-value=1.9e-07 Score=99.21 Aligned_cols=189 Identities=8% Similarity=0.026 Sum_probs=125.2
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCC--eEEEEECCCCCceeEEe-
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVSWL- 77 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DG--tV~VWDl~t~~~~v~~l- 77 (568)
+|+++++++++...++.|++||+.+++....... . .... ++|+++++ .|+.+..++ .|++||..+... ...+
T Consensus 137 a~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~-~-~~~~-ia~~~~g~-~l~~~d~~~~~~I~~~d~~~~~~-~~~~g 211 (409)
T 3hrp_A 137 AAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG-F-KGGK-PAVTKDKQ-RVYSIGWEGTHTVYVYMKASGWA-PTRIG 211 (409)
T ss_dssp EECSTTEEEEEETTTTEEEEEETTTTEEEEEEET-C-CBCB-CEECTTSS-EEEEEBSSTTCEEEEEEGGGTTC-EEEEE
T ss_pred EEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc-C-CCCc-eeEecCCC-cEEEEecCCCceEEEEEcCCCce-eEEee
Confidence 3678888666666678999999987776555543 2 2334 89999998 677777655 799999876543 2222
Q ss_pred ---ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeE----e-ecCCCe--EEEEEecC-CCEEEEEEcCCeE
Q 008356 78 ---KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSC----I-TYEAPF--SSLAFIDD-DWILTAGTSNGRV 146 (568)
Q Consensus 78 ---~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~----~-~h~~~I--tsLafsPd-g~~LasGs~DG~V 146 (568)
......+.+++++|++..|+.+..++.|+.||..++..... . ...... ..++|+|+ +.++++-..++.|
T Consensus 212 ~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I 291 (409)
T 3hrp_A 212 QLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSV 291 (409)
T ss_dssp ECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEE
T ss_pred eccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEE
Confidence 22556788999999555566677889999999987764332 1 111112 39999995 5555555678899
Q ss_pred EEEECCCCCCceEEEeecC-------------CCCCeeEEEEccCCCeEEEeccCCCCeEEEEec-CCCcEEcCCCC
Q 008356 147 VFYDIRGKPQPLTVLRACS-------------SSEAVSSLCWQRAKPVFIDETTCKAETALLGGA-VGDSILMPDPL 209 (568)
Q Consensus 147 ~VWDlrt~~~~v~~l~~~~-------------h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s-~Dg~V~VWDlr 209 (568)
+.|+.... ...+.... .-.....++++++|.++ ++.. .+..|+.||+.
T Consensus 292 ~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ly------------vad~~~~~~I~~~~~~ 353 (409)
T 3hrp_A 292 YKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFY------------IVDGFKGYCLRKLDIL 353 (409)
T ss_dssp EEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEE------------EEETTTTCEEEEEETT
T ss_pred EEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEE------------EEeCCCCCEEEEEECC
Confidence 99998764 22332111 02347889998876543 3344 57788888753
No 204
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.84 E-value=1.3e-07 Score=95.24 Aligned_cols=173 Identities=12% Similarity=0.060 Sum_probs=115.0
Q ss_pred CccCCCC-EEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 008356 1 MYNCKDE-HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (568)
Q Consensus 1 afSpdG~-~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~ 79 (568)
+|+++|+ ++++...++.|..|+. +++. ..+.. ....+..++++++|+ ++++...++.|.+||.+ +. ...+..
T Consensus 51 ~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~-~~~~~~gl~~d~dG~-l~v~~~~~~~v~~~~~~-g~--~~~~~~ 123 (305)
T 3dr2_A 51 AWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLD-ATAFTNGNAVDAQQR-LVHCEHGRRAITRSDAD-GQ--AHLLVG 123 (305)
T ss_dssp EEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEE-SCSCEEEEEECTTSC-EEEEETTTTEEEEECTT-SC--EEEEEC
T ss_pred eEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeC-CCCccceeeECCCCC-EEEEECCCCEEEEECCC-CC--EEEEEe
Confidence 3788998 4555566889999997 5553 34443 445678899999997 66655566889999986 33 222221
Q ss_pred C-----CCCeEEEEEcCCCCEEEE----EeC-------------CCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEE
Q 008356 80 H-----SAPTAGISFSSDDKIIAS----VGL-------------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWIL 137 (568)
Q Consensus 80 H-----~~~VtslafsPdg~~LaS----gs~-------------DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~L 137 (568)
+ ...++++++.++++++++ +.. .+.|+.||..+++..... .......++|+|+++.|
T Consensus 124 ~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~l 202 (305)
T 3dr2_A 124 RYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTL 202 (305)
T ss_dssp EETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEE
T ss_pred ccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEE
Confidence 1 234778999999998886 332 356888888777655444 44567889999999988
Q ss_pred EEEEcC------CeEEEEECCCCCC-ceEEEeecCCCCCeeEEEEccCCCeE
Q 008356 138 TAGTSN------GRVVFYDIRGKPQ-PLTVLRACSSSEAVSSLCWQRAKPVF 182 (568)
Q Consensus 138 asGs~D------G~V~VWDlrt~~~-~v~~l~~~~h~~~VtsLafspdg~~L 182 (568)
+++... +.|.+||+..... ....+.. ...+....++++++|++.
T Consensus 203 yv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~-~~~~~pdgi~~d~~G~lw 253 (305)
T 3dr2_A 203 YVSQTPEQGHGSVEITAFAWRDGALHDRRHFAS-VPDGLPDGFCVDRGGWLW 253 (305)
T ss_dssp EEEECCC---CCCEEEEEEEETTEEEEEEEEEC-CSSSCCCSEEECTTSCEE
T ss_pred EEEecCCcCCCCCEEEEEEecCCCccCCeEEEE-CCCCCCCeEEECCCCCEE
Confidence 887765 7899999875420 0111111 123445567787776533
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.83 E-value=4.8e-07 Score=90.75 Aligned_cols=175 Identities=13% Similarity=0.083 Sum_probs=115.5
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCC---CCCcEEEEEEccCCCeEEEEEeC---------CCeEEEEECCC
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDP---NEQVLRVLDYSRNSRHLLVTAGD---------DGTLHLWDTTG 69 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~---h~~~Vs~Lafspdg~~lLaTgs~---------DGtV~VWDl~t 69 (568)
++++|++++ +. ++.|.+||.++++........ ....+++++++++|+ ++++... .....||.++.
T Consensus 61 ~~~dG~l~v-~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~ 137 (297)
T 3g4e_A 61 LRQSGGYVA-TI-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFP 137 (297)
T ss_dssp EBTTSSEEE-EE-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECT
T ss_pred ECCCCCEEE-EE-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEEC
Confidence 678898554 44 567999999877654333221 124578899999998 5554322 13345555543
Q ss_pred CCceeEEeccCCCCeEEEEEcCCCCEEE-EEeCCCeEEEEEC--CCCcee--eEe----ecCCCeEEEEEecCCCEEEEE
Q 008356 70 RSPKVSWLKQHSAPTAGISFSSDDKIIA-SVGLDKKLYTYDP--GSRRPS--SCI----TYEAPFSSLAFIDDDWILTAG 140 (568)
Q Consensus 70 ~~~~v~~l~~H~~~VtslafsPdg~~La-Sgs~DGtV~IWDl--rt~~~v--~~~----~h~~~ItsLafsPdg~~LasG 140 (568)
... ...+..+....+.++|+|+++.|+ +...++.|.+||+ .++... ..+ .....+..++++++|++.++.
T Consensus 138 ~g~-~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 138 DHH-VKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp TSC-EEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEE
T ss_pred CCC-EEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 221 233334445678999999998765 4456789999987 455432 122 123567899999999888888
Q ss_pred EcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEc-cCCCeEE
Q 008356 141 TSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQ-RAKPVFI 183 (568)
Q Consensus 141 s~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafs-pdg~~La 183 (568)
..++.|.+||.++++ .+..+. .+...+++++|. |+++.|.
T Consensus 217 ~~~~~v~~~d~~tG~-~~~~i~--~p~~~~t~~~f~g~d~~~L~ 257 (297)
T 3g4e_A 217 YNGGRVIRLDPVTGK-RLQTVK--LPVDKTTSCCFGGKNYSEMY 257 (297)
T ss_dssp ETTTEEEEECTTTCC-EEEEEE--CSSSBEEEEEEESGGGCEEE
T ss_pred cCCCEEEEEcCCCce-EEEEEE--CCCCCceEEEEeCCCCCEEE
Confidence 788899999998663 344444 345679999998 7655543
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.82 E-value=8.5e-07 Score=88.96 Aligned_cols=190 Identities=9% Similarity=0.047 Sum_probs=120.3
Q ss_pred ccCCCCEE-EEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc-
Q 008356 2 YNCKDEHL-ASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ- 79 (568)
Q Consensus 2 fSpdG~~L-asGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~- 79 (568)
|+++++.| ++...++.|+.||..+++. ..+. ....+.+++++++++ ++++ . ++.|.+||..+++. ..+..
T Consensus 20 w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~--~~~~~~~i~~~~dG~-l~v~-~-~~~l~~~d~~~g~~--~~~~~~ 91 (297)
T 3g4e_A 20 WEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT--MDAPVSSVALRQSGG-YVAT-I-GTKFCALNWKEQSA--VVLATV 91 (297)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTTCCE-EEEE--CSSCEEEEEEBTTSS-EEEE-E-TTEEEEEETTTTEE--EEEEEC
T ss_pred EECCCCEEEEEECCCCEEEEEECCCCcE-EEEe--CCCceEEEEECCCCC-EEEE-E-CCeEEEEECCCCcE--EEEEec
Confidence 77865554 4445678999999987765 3343 345788999999998 5554 3 56899999987652 22221
Q ss_pred ----CCCCeEEEEEcCCCCEEEEEeC-----------CCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEE-EcC
Q 008356 80 ----HSAPTAGISFSSDDKIIASVGL-----------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAG-TSN 143 (568)
Q Consensus 80 ----H~~~VtslafsPdg~~LaSgs~-----------DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasG-s~D 143 (568)
....+++++++|+++++++... .+.|+.+|.. ++...........+.++|+|+++.|++. +.+
T Consensus 92 ~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~ 170 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLS 170 (297)
T ss_dssp CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGG
T ss_pred CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCCC
Confidence 1235889999999997765432 2345555543 3433334444567899999999877554 557
Q ss_pred CeEEEEECC--CCCCc-eEEEeec-CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 144 GRVVFYDIR--GKPQP-LTVLRAC-SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 144 G~V~VWDlr--t~~~~-v~~l~~~-~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
+.|.+||+. ++... .+.+... .+...+..++++++|++.++ ...++.|.+||.....
T Consensus 171 ~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva------------~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 171 YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVA------------CYNGGRVIRLDPVTGK 231 (297)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEE------------EETTTEEEEECTTTCC
T ss_pred CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEE------------EcCCCEEEEEcCCCce
Confidence 899999974 33110 1222211 23356788888887654433 3346678888875433
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.80 E-value=1.2e-06 Score=89.45 Aligned_cols=186 Identities=13% Similarity=0.035 Sum_probs=118.7
Q ss_pred CccCCCCEE-EEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 008356 1 MYNCKDEHL-ASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (568)
Q Consensus 1 afSpdG~~L-asGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~ 79 (568)
+|+++++.| ++...++.|.+||..+++.. .+. ....+.+++|.++++ ++++ ..+ .|.+||..+++. ..+..
T Consensus 55 ~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~--~~~~v~~i~~~~dg~-l~v~-~~~-gl~~~d~~~g~~--~~~~~ 126 (326)
T 2ghs_A 55 TFDPASGTAWWFNILERELHELHLASGRKT-VHA--LPFMGSALAKISDSK-QLIA-SDD-GLFLRDTATGVL--TLHAE 126 (326)
T ss_dssp EEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE--CSSCEEEEEEEETTE-EEEE-ETT-EEEEEETTTCCE--EEEEC
T ss_pred eEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE--CCCcceEEEEeCCCe-EEEE-ECC-CEEEEECCCCcE--EEEee
Confidence 377876554 45556789999998776543 343 235688999999987 4554 444 499999877662 22221
Q ss_pred C-----CCCeEEEEEcCCCCEEEEEeC------CCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEE-cCCeEE
Q 008356 80 H-----SAPTAGISFSSDDKIIASVGL------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGT-SNGRVV 147 (568)
Q Consensus 80 H-----~~~VtslafsPdg~~LaSgs~------DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs-~DG~V~ 147 (568)
. ...+++++++++++++++... .+.|..+| +++.............++|+|+++.|+.+. .++.|.
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~ 204 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLM 204 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEE
Confidence 1 235899999999997765542 35677777 455443334445678999999998776654 568999
Q ss_pred EEECC--CC-CC-ceEEEeec-CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCC
Q 008356 148 FYDIR--GK-PQ-PLTVLRAC-SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (568)
Q Consensus 148 VWDlr--t~-~~-~v~~l~~~-~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDl 208 (568)
+||++ ++ .. ....+... .....+..++++++|.+.++ ...++.|.+||.
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva------------~~~~~~v~~~d~ 258 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNA------------RWGEGAVDRYDT 258 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEE------------EETTTEEEEECT
T ss_pred EEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEE------------EeCCCEEEEECC
Confidence 99986 33 11 11222211 23455677888876654333 333567777776
No 208
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.77 E-value=3e-07 Score=104.49 Aligned_cols=198 Identities=13% Similarity=0.108 Sum_probs=125.9
Q ss_pred CccCCCCEEEEEECCCc--------------EEEEECCCCce--eEEeeCC-CCCcEEEEEEccCCCeEEEEEeC----C
Q 008356 1 MYNCKDEHLASISLSGD--------------LILHNLASGAK--AAELKDP-NEQVLRVLDYSRNSRHLLVTAGD----D 59 (568)
Q Consensus 1 afSpdG~~LasGs~DG~--------------V~VWDl~tg~~--v~~l~~~-h~~~Vs~Lafspdg~~lLaTgs~----D 59 (568)
+|+|| +.|+.+..++. |++|++.++.. ...+... +...+..+.|+|+|+.+++++.. +
T Consensus 215 ~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~ 293 (741)
T 1yr2_A 215 AWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPV 293 (741)
T ss_dssp EESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSC
T ss_pred EEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCc
Confidence 48999 99988877654 89999977652 2233321 22347789999999855554432 3
Q ss_pred CeEEEEECCCCCce-eEEeccCCCCeEEEEEcCCCCEEEEEeCC----CeEEEEECCCC--ceeeEee-cCCCeEEEEEe
Q 008356 60 GTLHLWDTTGRSPK-VSWLKQHSAPTAGISFSSDDKIIASVGLD----KKLYTYDPGSR--RPSSCIT-YEAPFSSLAFI 131 (568)
Q Consensus 60 GtV~VWDl~t~~~~-v~~l~~H~~~VtslafsPdg~~LaSgs~D----GtV~IWDlrt~--~~v~~~~-h~~~ItsLafs 131 (568)
..|++||+.++... ...+..+...+.... .|+++.|+..+.+ +.|.+||+.++ +....+. +...+..++|.
T Consensus 294 ~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~ 372 (741)
T 1yr2_A 294 NTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA 372 (741)
T ss_dssp CEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE
T ss_pred ceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE
Confidence 48999999776212 344555555555554 4888888877753 46999999874 3344443 33446677887
Q ss_pred cCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 132 DDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 132 Pdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
++.++++...|+..+||.++........+. ..+.+.|..+.++++++.++.. .-+....+.|++||+..
T Consensus 373 -~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~-~~~~~~v~~~~~s~d~~~l~~~--------~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 373 -GNRLFASYIHDAKSQVLAFDLDGKPAGAVS-LPGIGSASGLSGRPGDRHAYLS--------FSSFTQPATVLALDPAT 441 (741)
T ss_dssp -BTEEEEEEEETTEEEEEEEETTSCEEEECB-CSSSCEEEEEECCBTCSCEEEE--------EEETTEEEEEEEEETTT
T ss_pred -CCEEEEEEEECCEEEEEEEeCCCCceeecc-CCCCeEEEEeecCCCCCEEEEE--------EcCCCCCCEEEEEECCC
Confidence 567788888899877775542222233333 1245678889999987655433 11223357788888754
No 209
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.75 E-value=6e-08 Score=102.96 Aligned_cols=124 Identities=12% Similarity=0.060 Sum_probs=97.6
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCe
Q 008356 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPT 84 (568)
Q Consensus 5 dG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~V 84 (568)
|+++|+++ .++.|++||+.+......+.. +...+.++.+.+. + ++++..||.|.+||+..... .. +...|
T Consensus 96 d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~-~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~-~~----~~~~V 165 (388)
T 1xip_A 96 HGDQVLVS-TRNALYSLDLEELSEFRTVTS-FEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKST-KQ----LAQNV 165 (388)
T ss_dssp ETTEEEEE-ESSEEEEEESSSTTCEEEEEE-CSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCE-EE----EEESE
T ss_pred CCCEEEEE-cCCcEEEEEchhhhccCccce-eecceeeEEecCC--C-EEEEECCCCEEEEEccCCcc-cc----ccCCc
Confidence 78899998 889999999987665444444 4455777777754 2 78889999999999987663 21 44679
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCce--eeEe------e----cCCCeEEEEEecCCCEEEEE
Q 008356 85 AGISFSSDDKIIASVGLDKKLYTYDPGSRRP--SSCI------T----YEAPFSSLAFIDDDWILTAG 140 (568)
Q Consensus 85 tslafsPdg~~LaSgs~DGtV~IWDlrt~~~--v~~~------~----h~~~ItsLafsPdg~~LasG 140 (568)
+|++|+|+| ++.|..||++++|+...++. ...+ . |...|.++.|.+++.++++=
T Consensus 166 s~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 166 TSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp EEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred eEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 999999999 78899999999999887775 4455 2 56789999999998888763
No 210
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.75 E-value=1.8e-09 Score=113.01 Aligned_cols=186 Identities=11% Similarity=0.048 Sum_probs=97.4
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC-CC
Q 008356 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS-AP 83 (568)
Q Consensus 5 dG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~-~~ 83 (568)
++..|++++.||.|+.||..+|+.+..+.. ..+.+..+..++. ++++++.||.|+.||..+++.... +..+. ..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~---~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~w~-~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE---DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGLTK-LPFTIPEL 82 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC---CCSCCCC-----C-CEEECTTTCCEEEC-----CCSEE-CSCCHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC---CCceecceEcCCC-EEEEeCCCCEEEEEECCCCceeee-eeccCccc
Confidence 578899999999999999999999888875 2233334455665 677778999999999977764322 22221 11
Q ss_pred eE-EEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEe
Q 008356 84 TA-GISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLR 162 (568)
Q Consensus 84 Vt-slafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~ 162 (568)
+. ...+ .++..+++++.|+.|+.||.++++.+..+..... ..++|++..|++++.|+.|+.||.++++.....-.
T Consensus 83 ~~~sp~~-~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~---~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 83 VQASPCR-SSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA---DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp HTTCSCC------CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred cccCceE-ecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc---ccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 10 0011 1345678888899999999999998877643332 34566888999999999999999998754333211
Q ss_pred ecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 163 ACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 163 ~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
.. .....+..+. ..++. ++.++.|+.|+.||.+....
T Consensus 159 -~~----~~~~~~~~~~--------~~~~~-v~~~~~dg~v~a~d~~tG~~ 195 (369)
T 2hz6_A 159 -FD----YAASLPEDDV--------DYKMS-HFVSNGDGLVVTVDSESGDV 195 (369)
T ss_dssp -EE----ECCBCCCCCT--------TCCCC-EEEEETSCEEEEECTTTCCE
T ss_pred -cc----ccCccccCCc--------cccce-EEEECCCCEEEEEECCCCcE
Confidence 00 1111111110 01123 44455689999999876543
No 211
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.75 E-value=8.8e-07 Score=94.02 Aligned_cols=191 Identities=10% Similarity=0.062 Sum_probs=123.0
Q ss_pred CccCCCCEEEEEECCC--cEEEEECCCCceeEEe---eCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE
Q 008356 1 MYNCKDEHLASISLSG--DLILHNLASGAKAAEL---KDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (568)
Q Consensus 1 afSpdG~~LasGs~DG--~V~VWDl~tg~~v~~l---~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~ 75 (568)
+|+++++.|+++..++ .|.+|+...+.....+ .......+.+++++|++..+++ +..++.|+.||..+......
T Consensus 177 a~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 177 AVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEEE
T ss_pred eEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEEE
Confidence 4788999999888766 7999998765543333 1213455677999995553444 77789999999987652211
Q ss_pred E---eccCCCCe--EEEEEcCC-CCEEEEEeCCCeEEEEECCCCceeeEeecC---------------CCeEEEEEecCC
Q 008356 76 W---LKQHSAPT--AGISFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCITYE---------------APFSSLAFIDDD 134 (568)
Q Consensus 76 ~---l~~H~~~V--tslafsPd-g~~LaSgs~DGtV~IWDlrt~~~v~~~~h~---------------~~ItsLafsPdg 134 (568)
. ..++...- ..++|+|+ +.++++-..++.|+.||.... ......+. .....++++++|
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG 334 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG 334 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC
Confidence 0 12222222 39999994 666666667889999997644 32222322 347899999999
Q ss_pred CEEEEEE-cCCeEEEEECCCCCCceEEEeec-C------------CCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCC
Q 008356 135 WILTAGT-SNGRVVFYDIRGKPQPLTVLRAC-S------------SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVG 200 (568)
Q Consensus 135 ~~LasGs-~DG~V~VWDlrt~~~~v~~l~~~-~------------h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~D 200 (568)
+++++-. .++.|++||+..+. +..+... . .-.....++++++|.+ +++...+
T Consensus 335 ~lyvad~~~~~~I~~~~~~~G~--v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~l------------yVad~~n 400 (409)
T 3hrp_A 335 NFYIVDGFKGYCLRKLDILDGY--VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGY------------WIAEAWG 400 (409)
T ss_dssp CEEEEETTTTCEEEEEETTTTE--EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEE------------EEEESTT
T ss_pred CEEEEeCCCCCEEEEEECCCCE--EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCE------------EEEECCC
Confidence 9777777 78999999976552 2333211 0 0245788888886443 4444445
Q ss_pred CcEEcCC
Q 008356 201 DSILMPD 207 (568)
Q Consensus 201 g~V~VWD 207 (568)
+.|+.++
T Consensus 401 ~~Ir~i~ 407 (409)
T 3hrp_A 401 KAIRKYA 407 (409)
T ss_dssp CEEEEEE
T ss_pred CeEEEEE
Confidence 6666544
No 212
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.74 E-value=1.7e-06 Score=90.75 Aligned_cols=193 Identities=10% Similarity=-0.015 Sum_probs=127.6
Q ss_pred CccCCCCEEEEEEC--CCcEEEEECCCCceeEE-eeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 008356 1 MYNCKDEHLASISL--SGDLILHNLASGAKAAE-LKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (568)
Q Consensus 1 afSpdG~~LasGs~--DG~V~VWDl~tg~~v~~-l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l 77 (568)
+|+|||++|+++.. ++.|.++| .+++.+.. +.. .. ++.+.++++..+++.+.||.+.++|. +++.. ...
T Consensus 131 ~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~--~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~-~~~ 202 (373)
T 2mad_H 131 ANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS--PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAA-GAG 202 (373)
T ss_pred EECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC--Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEE-EEE
Confidence 37899999999874 47899999 99998877 653 12 24556777667888889999999999 65532 111
Q ss_pred c-----cCCCC-eEEEEEcCCCCEEEEEeCCCeEEEEECCCCce--eeEee-----------cCCCeEEEEEecCCCEEE
Q 008356 78 K-----QHSAP-TAGISFSSDDKIIASVGLDKKLYTYDPGSRRP--SSCIT-----------YEAPFSSLAFIDDDWILT 138 (568)
Q Consensus 78 ~-----~H~~~-VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~--v~~~~-----------h~~~ItsLafsPdg~~La 138 (568)
. ....+ .....+.+++..++..+..+.|.+.|+..... +..+. .......++++++++.++
T Consensus 203 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~ly 282 (373)
T 2mad_H 203 LVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIY 282 (373)
T ss_pred eccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEE
Confidence 1 11122 12345666655555555788999999976532 22221 122344578999998888
Q ss_pred EEEc----------CCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCC-eEEEeccCCCCeEEEEecCCCcEEcCC
Q 008356 139 AGTS----------NGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKP-VFIDETTCKAETALLGGAVGDSILMPD 207 (568)
Q Consensus 139 sGs~----------DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~-~Las~s~ssd~~~Lls~s~Dg~V~VWD 207 (568)
+... ++.|.++|+.+.+ .+..+. ......++.|+|+|+ .++++ ...++.|.+||
T Consensus 283 V~~~~~~~~~~~~~~~~V~VID~~t~~-vv~~i~---~g~~p~~i~~s~Dg~~~l~v~-----------~~~~~~V~ViD 347 (373)
T 2mad_H 283 LLTSEQSAWKLHAAAKEVTSVTGLVGQ-TSSQIS---LGHDVDAISVAQDGGPDLYAL-----------SAGTEVLHIYD 347 (373)
T ss_pred EEeccCCcccccCCCCeEEEEECCCCE-EEEEEE---CCCCcCeEEECCCCCeEEEEE-----------cCCCCeEEEEE
Confidence 8654 3579999998873 334443 334688999999876 33332 22478999999
Q ss_pred CCCCCcccc
Q 008356 208 PLPSVTTSS 216 (568)
Q Consensus 208 lr~~~~~~s 216 (568)
+........
T Consensus 348 ~~t~~vv~~ 356 (373)
T 2mad_H 348 AGAGDQDQS 356 (373)
T ss_pred CCCCCEEee
Confidence 887665433
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.71 E-value=6.9e-07 Score=91.77 Aligned_cols=181 Identities=8% Similarity=0.052 Sum_probs=119.3
Q ss_pred ccCCCCEEEEEEC-----CCcEEEEECCCCceeEEeeCC-----CCCcEEEEEEccCCCeEEEEEe---CCCeEEEEECC
Q 008356 2 YNCKDEHLASISL-----SGDLILHNLASGAKAAELKDP-----NEQVLRVLDYSRNSRHLLVTAG---DDGTLHLWDTT 68 (568)
Q Consensus 2 fSpdG~~LasGs~-----DG~V~VWDl~tg~~v~~l~~~-----h~~~Vs~Lafspdg~~lLaTgs---~DGtV~VWDl~ 68 (568)
|.++|+++++-.. ++.|.+||+.+++.+..+..+ +...+..+++++++..++++-. .++.|.+||+.
T Consensus 74 ~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~ 153 (343)
T 2qe8_A 74 SDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQ 153 (343)
T ss_dssp ECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETT
T ss_pred EcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECC
Confidence 5677765554332 578999999999877766532 1234578999987654566655 67899999997
Q ss_pred CCCceeEEeccC-----------------------------CCCeEEEEEcCCCCEEEEEeCCC-eEEEEECC---CCc-
Q 008356 69 GRSPKVSWLKQH-----------------------------SAPTAGISFSSDDKIIASVGLDK-KLYTYDPG---SRR- 114 (568)
Q Consensus 69 t~~~~v~~l~~H-----------------------------~~~VtslafsPdg~~LaSgs~DG-tV~IWDlr---t~~- 114 (568)
+++. .+.+..| ...++.|+|+|+++.|+.+..++ .|..+|.. .+.
T Consensus 154 ~g~~-~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~ 232 (343)
T 2qe8_A 154 TGLA-ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQL 232 (343)
T ss_dssp TCCE-EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTC
T ss_pred CCCE-EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCC
Confidence 6652 3333222 12368899999999888887666 56666532 111
Q ss_pred -------eeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 008356 115 -------PSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 115 -------~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~ 185 (568)
.+....+......++++++|+++++...++.|.+||...+. +..+....+...+.+++|.+++.++++.
T Consensus 233 ~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~--~~~~~~~~~~~~p~~va~~~~g~l~v~~ 308 (343)
T 2qe8_A 233 TDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA--YKLLVTDEKLSWTDSFNFGSDGYLYFDC 308 (343)
T ss_dssp CHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE--EEEEEECGGGSCEEEEEECTTSCEEEEE
T ss_pred ChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC--EEEEEECCceecCCeeEECCCCcEEEEe
Confidence 01222344567789999999999998889999999984332 2222211234568899998876554443
No 214
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.71 E-value=2.6e-06 Score=86.85 Aligned_cols=170 Identities=13% Similarity=0.070 Sum_probs=111.4
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeC---CCCCcEEEEEEccCCCeEEEEEeC------CCeEEEEECCCCCc
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKD---PNEQVLRVLDYSRNSRHLLVTAGD------DGTLHLWDTTGRSP 72 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~---~h~~~Vs~Lafspdg~~lLaTgs~------DGtV~VWDl~t~~~ 72 (568)
|+++|+++++. .+ .|.+||..+++....... .....+.+++++++|+ ++++... .+.|+.+| +++
T Consensus 97 ~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~- 170 (326)
T 2ghs_A 97 KISDSKQLIAS-DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KGK- 170 (326)
T ss_dssp EEETTEEEEEE-TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TTE-
T ss_pred EeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CCc-
Confidence 56788766644 44 499999988875433221 1124588999999998 5554432 24566666 333
Q ss_pred eeEEeccCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEECC--CC-cee--eEe-e---cCCCeEEEEEecCCCEEEEEEc
Q 008356 73 KVSWLKQHSAPTAGISFSSDDKIIASV-GLDKKLYTYDPG--SR-RPS--SCI-T---YEAPFSSLAFIDDDWILTAGTS 142 (568)
Q Consensus 73 ~v~~l~~H~~~VtslafsPdg~~LaSg-s~DGtV~IWDlr--t~-~~v--~~~-~---h~~~ItsLafsPdg~~LasGs~ 142 (568)
...+..+....+.++|+|+++.|+.+ ..++.|.+||+. ++ +.. ..+ . ....+..+++.++|++.++...
T Consensus 171 -~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~ 249 (326)
T 2ghs_A 171 -VTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWG 249 (326)
T ss_dssp -EEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEET
T ss_pred -EEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeC
Confidence 33333344567899999999877555 457899999986 55 321 122 1 2345788999999988777767
Q ss_pred CCeEEEEECCCCCCceEEEeecCCCCCeeEEEEc-cCCCeE
Q 008356 143 NGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQ-RAKPVF 182 (568)
Q Consensus 143 DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafs-pdg~~L 182 (568)
++.|.+||... +.+..+. .+...+++++|. ++++.|
T Consensus 250 ~~~v~~~d~~g--~~~~~i~--~~~~~~~~~af~g~d~~~L 286 (326)
T 2ghs_A 250 EGAVDRYDTDG--NHIARYE--VPGKQTTCPAFIGPDASRL 286 (326)
T ss_dssp TTEEEEECTTC--CEEEEEE--CSCSBEEEEEEESTTSCEE
T ss_pred CCEEEEECCCC--CEEEEEE--CCCCCcEEEEEecCCCCEE
Confidence 78999999843 2344444 344579999998 765544
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.67 E-value=7.4e-07 Score=100.66 Aligned_cols=176 Identities=13% Similarity=0.053 Sum_probs=111.5
Q ss_pred CccCCCCEEEEEEC-----CCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCC-------------CeE
Q 008356 1 MYNCKDEHLASISL-----SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD-------------GTL 62 (568)
Q Consensus 1 afSpdG~~LasGs~-----DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~D-------------GtV 62 (568)
+|||||++||.+.. ...|++||+++++.+..... ......++|+ |++. |+.+..+ ..|
T Consensus 135 ~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~--~~k~~~~~Ws-Dg~~-l~y~~~~~~~~~~~~~~~~~~~v 210 (693)
T 3iuj_A 135 SFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLK--DVKFSGISWL-GNEG-FFYSSYDKPDGSELSARTDQHKV 210 (693)
T ss_dssp EECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE--EEESCCCEEE-TTTE-EEEEESSCCC-------CCCCEE
T ss_pred EECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccC--CceeccEEEe-CCCE-EEEEEecCcccccccccCCCcEE
Confidence 48999999886432 24799999999986543211 1112457899 9985 5444544 349
Q ss_pred EEEECCCCCce---eEEecc-CCCCeEEEEEcCCCCEEEEEeC----CCeEEEEECCCC--ceeeEeecCCCeEEEEEec
Q 008356 63 HLWDTTGRSPK---VSWLKQ-HSAPTAGISFSSDDKIIASVGL----DKKLYTYDPGSR--RPSSCITYEAPFSSLAFID 132 (568)
Q Consensus 63 ~VWDl~t~~~~---v~~l~~-H~~~VtslafsPdg~~LaSgs~----DGtV~IWDlrt~--~~v~~~~h~~~ItsLafsP 132 (568)
++|++.+.... +..... |...+..+.|+||+++|+.... +..|+++|+.++ +......+....... |.+
T Consensus 211 ~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~ 289 (693)
T 3iuj_A 211 YFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDN 289 (693)
T ss_dssp EEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEE
T ss_pred EEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-Eec
Confidence 99999765422 222223 4556788999999998865432 358999999876 333334454444444 666
Q ss_pred CCCEEEEEEc----CCeEEEEECCCCCC-ceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 008356 133 DDWILTAGTS----NGRVVFYDIRGKPQ-PLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 133 dg~~LasGs~----DG~V~VWDlrt~~~-~v~~l~~~~h~~~VtsLafspdg~~Las~ 185 (568)
+|..|+..+. .+.|.++|+.+... ..+.+. .|...+. .|++++++|+..
T Consensus 290 ~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~--~~~~~~~--~~s~~g~~lv~~ 343 (693)
T 3iuj_A 290 KGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLI--PERQQVL--TVHSGSGYLFAE 343 (693)
T ss_dssp ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEE--CCCSSCE--EEEEETTEEEEE
T ss_pred cCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEe--cCCCCEE--EEEEECCEEEEE
Confidence 6666665543 36799999987632 123333 4555554 788877666544
No 216
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.62 E-value=3.6e-06 Score=84.84 Aligned_cols=192 Identities=13% Similarity=0.124 Sum_probs=127.8
Q ss_pred ccCCCCEEEEEEC--CCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 008356 2 YNCKDEHLASISL--SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (568)
Q Consensus 2 fSpdG~~LasGs~--DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~ 79 (568)
|++++.+.++.+. ++.|.++|+.+++.+..+..........+++. ++.++++.-.++.|.++|..+.+. +..+..
T Consensus 28 ~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v-~~~i~~ 104 (266)
T 2iwa_A 28 YAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN-IKNFTH 104 (266)
T ss_dssp ECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE-EEEEEC
T ss_pred EeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE-EEEEEC
Confidence 6777644444443 57999999999999888764333233345554 455666666789999999988764 444432
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecC------CCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 008356 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYE------APFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 80 H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~------~~ItsLafsPdg~~LasGs~DG~V~VWDlrt 153 (568)
.... ...+.+|++.++++..++.|.++|..+.+.+..+.-. ..++.+.|. ++...+....++.|.+.|+.+
T Consensus 105 g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~t 181 (266)
T 2iwa_A 105 QMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKD 181 (266)
T ss_dssp CSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTT
T ss_pred CCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCC
Confidence 2111 2335567777777778899999999998888776422 236788888 665544444678999999998
Q ss_pred CCCceEEEeecC-----------CCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCC
Q 008356 154 KPQPLTVLRACS-----------SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (568)
Q Consensus 154 ~~~~v~~l~~~~-----------h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~ 211 (568)
.+ .+..+...+ .......|+|+|+++ .+++++.....|.+.|+.+.
T Consensus 182 g~-V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~-----------~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 182 GT-LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENK-----------RIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp CC-EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTT-----------EEEEEETTCSEEEEEEEEEC
T ss_pred Cc-EEEEEECCCcccccccccccccCceEEEEEcCCCC-----------EEEEECCCCCeEEEEEEecc
Confidence 74 455554211 113568999999754 44555666777777776553
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.58 E-value=4.8e-06 Score=88.27 Aligned_cols=147 Identities=6% Similarity=-0.044 Sum_probs=110.9
Q ss_pred ccCCCCEEEEEEC-----CCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEe---------CCCeEEEEEC
Q 008356 2 YNCKDEHLASISL-----SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG---------DDGTLHLWDT 67 (568)
Q Consensus 2 fSpdG~~LasGs~-----DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs---------~DGtV~VWDl 67 (568)
..|+++.+++... ++.|.++|..+++.+..+..... . . ++++|+++.++++.. .++.|.+||.
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~-P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFL-P-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSS-C-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCC-C-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 3588999888876 67999999999999998886433 3 4 899999996555542 4678999999
Q ss_pred CCCCceeEEeccC-------CCCeEEEEEcCCCCEEEEEeC--CCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEE
Q 008356 68 TGRSPKVSWLKQH-------SAPTAGISFSSDDKIIASVGL--DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILT 138 (568)
Q Consensus 68 ~t~~~~v~~l~~H-------~~~VtslafsPdg~~LaSgs~--DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~La 138 (568)
.+.+. +..+... ......+.|+||+++++++.. ++.|.++|+.+++.+..+...+. ...+....+.++
T Consensus 117 ~t~~v-~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~ 193 (386)
T 3sjl_D 117 VTLLP-TADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFF 193 (386)
T ss_dssp TTCCE-EEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEE
T ss_pred CCCeE-EEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeE
Confidence 98874 3333221 224667999999999988864 68999999999999888855431 233333456777
Q ss_pred EEEcCCeEEEEECCCC
Q 008356 139 AGTSNGRVVFYDIRGK 154 (568)
Q Consensus 139 sGs~DG~V~VWDlrt~ 154 (568)
+.+.||.+.+.++...
T Consensus 194 ~~~~DG~~~~v~~~~~ 209 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTE 209 (386)
T ss_dssp EEETTSCEEEEECCSS
T ss_pred EECCCCCEEEEECCCC
Confidence 8888999999999763
No 218
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.57 E-value=1.4e-05 Score=83.74 Aligned_cols=206 Identities=11% Similarity=0.022 Sum_probs=122.7
Q ss_pred CccCCCCEEEEEE----------CCCcEEEEECCCCceeEEeeCC-C-----CCcEEEEEEccCCCeEEEEEe-C-CCeE
Q 008356 1 MYNCKDEHLASIS----------LSGDLILHNLASGAKAAELKDP-N-----EQVLRVLDYSRNSRHLLVTAG-D-DGTL 62 (568)
Q Consensus 1 afSpdG~~LasGs----------~DG~V~VWDl~tg~~v~~l~~~-h-----~~~Vs~Lafspdg~~lLaTgs-~-DGtV 62 (568)
+|+|||++|+++. .++.|.+||..+.+.+..+... . ......+.|+|+|+. |+++. . ++.|
T Consensus 72 ~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~-l~v~n~~~~~~v 150 (373)
T 2mad_H 72 VAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNAD-LLFFQFAAGPAV 150 (373)
T ss_pred EECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCE-EEEEecCCCCeE
Confidence 4799999999886 3678999999998888777542 0 122356899999994 55554 3 5889
Q ss_pred EEEECCCCCceeEE-eccCCCCeEEEEEcCCC-CEEEEEeCCCeEEEEECCCCceeeEee------cCCC-eEEEEEecC
Q 008356 63 HLWDTTGRSPKVSW-LKQHSAPTAGISFSSDD-KIIASVGLDKKLYTYDPGSRRPSSCIT------YEAP-FSSLAFIDD 133 (568)
Q Consensus 63 ~VWDl~t~~~~v~~-l~~H~~~VtslafsPdg-~~LaSgs~DGtV~IWDlrt~~~v~~~~------h~~~-ItsLafsPd 133 (568)
.++| .+++. +.. +. ... |+.+.|++ +.+++.+.||.+.++|. +++.+.... ...+ .....+.++
T Consensus 151 ~viD-~t~~~-~~~~i~-~~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 151 GLVV-QGGSS-DDQLLS-SPT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred EEEE-CCCCE-EeEEcC-CCc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 9999 88763 333 32 222 24455643 56677788999999999 877663321 1112 233456676
Q ss_pred CCEEEEEEcCCeEEEEECCCCCCc-eEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEec---------CCCcE
Q 008356 134 DWILTAGTSNGRVVFYDIRGKPQP-LTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGA---------VGDSI 203 (568)
Q Consensus 134 g~~LasGs~DG~V~VWDlrt~~~~-v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s---------~Dg~V 203 (568)
+..++..+.++.|.+.|+...... ...+. ..........|.|.+...+.. ..++..+++... ..+.|
T Consensus 224 ~~~~~~~~~~~~v~vid~~~~~~~v~~~~~--~~~~~~~~~~~~p~g~~~~~~-s~d~~~lyV~~~~~~~~~~~~~~~~V 300 (373)
T 2mad_H 224 SGRIVWPVYSGKILQADISAAGATNKAPID--ALSGGRKADTWRPGGWQQVAY-LKSSDGIYLLTSEQSAWKLHAAAKEV 300 (373)
T ss_pred CCEEEEEcCCceEEEEeccCCcceEeeeee--ecCCcccccceecCceEeEEE-CCCCCEEEEEeccCCcccccCCCCeE
Confidence 666555557889999999764321 11111 111122233445544333322 112233333322 13579
Q ss_pred EcCCCCCCCccccc
Q 008356 204 LMPDPLPSVTTSSV 217 (568)
Q Consensus 204 ~VWDlr~~~~~~s~ 217 (568)
.++|+.......++
T Consensus 301 ~VID~~t~~vv~~i 314 (373)
T 2mad_H 301 TSVTGLVGQTSSQI 314 (373)
T ss_pred EEEECCCCEEEEEE
Confidence 99998776554443
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.57 E-value=4.4e-06 Score=94.33 Aligned_cols=195 Identities=14% Similarity=0.151 Sum_probs=123.7
Q ss_pred CccCCCCEEEEEECCC-------------cEEEEECCCCce--eEEeeCC--CCCcEEEEEEccCCCeEEEEEeCC---C
Q 008356 1 MYNCKDEHLASISLSG-------------DLILHNLASGAK--AAELKDP--NEQVLRVLDYSRNSRHLLVTAGDD---G 60 (568)
Q Consensus 1 afSpdG~~LasGs~DG-------------~V~VWDl~tg~~--v~~l~~~--h~~~Vs~Lafspdg~~lLaTgs~D---G 60 (568)
+|+ ||+.|+.+..+. .|++|++.++.. ...+... +...+..+.|+|+++.++++...+ .
T Consensus 181 ~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 259 (693)
T 3iuj_A 181 SWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGN 259 (693)
T ss_dssp EEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCC
T ss_pred EEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCc
Confidence 488 999999888774 399999987653 3333321 123456789999999766666533 5
Q ss_pred eEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEe-CC---CeEEEEECCCCce---eeEeecCCCeEEEEEecC
Q 008356 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVG-LD---KKLYTYDPGSRRP---SSCITYEAPFSSLAFIDD 133 (568)
Q Consensus 61 tV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs-~D---GtV~IWDlrt~~~---v~~~~h~~~ItsLafsPd 133 (568)
.|++||+.+.......+..+....... |.+++..|+..+ .+ +.|..+|+.++.. ...+.+...+. .|+++
T Consensus 260 ~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~ 336 (693)
T 3iuj_A 260 RLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSG 336 (693)
T ss_dssp EEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEE
T ss_pred EEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEE
Confidence 899999977643355566666666655 666666555444 33 5899999988754 33445555554 88898
Q ss_pred CCEEEEEEc-CC--eEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 134 DWILTAGTS-NG--RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 134 g~~LasGs~-DG--~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
++.|+.... ++ .|++||+.+.. ...+. ..+.+.+..+.++++++.++.... +...-+.|..||+..
T Consensus 337 g~~lv~~~~~~g~~~l~~~d~~g~~--~~~l~-~p~~~~~~~~~~~~d~~~l~~~~s--------s~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 337 SGYLFAEYMVDATARVEQFDYEGKR--VREVA-LPGLGSVSGFNGKHDDPALYFGFE--------NYAQPPTLYRFEPKS 405 (693)
T ss_dssp TTEEEEEEEETTEEEEEEECTTSCE--EEEEC-CSSSSEEEECCCCTTCSCEEEEEE--------CSSSCCEEEEECTTT
T ss_pred CCEEEEEEEECCeeEEEEEECCCCe--eEEee-cCCCceEEeeecCCCCCEEEEEec--------CCCCCCEEEEEECCC
Confidence 888877665 44 68899988542 23332 234455667777776554433211 001236788888654
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.55 E-value=1.6e-06 Score=93.01 Aligned_cols=112 Identities=5% Similarity=-0.036 Sum_probs=83.1
Q ss_pred CCCCEEEEEECC-----CcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEe---------CCCeEEEEECCC
Q 008356 4 CKDEHLASISLS-----GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG---------DDGTLHLWDTTG 69 (568)
Q Consensus 4 pdG~~LasGs~D-----G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs---------~DGtV~VWDl~t 69 (568)
++++++++.... +.|.++|+.+++.+..+..... . .+.++|+++.++++.. .++.|.++|..+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~-P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t 158 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFL-P--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT 158 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSS-C--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCC-C--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC
Confidence 466777766553 6999999999999999886433 3 6999999996555542 467899999988
Q ss_pred CCceeEEeccC-------CCCeEEEEEcCCCCEEEEEeC--CCeEEEEECCCCceeeEe
Q 008356 70 RSPKVSWLKQH-------SAPTAGISFSSDDKIIASVGL--DKKLYTYDPGSRRPSSCI 119 (568)
Q Consensus 70 ~~~~v~~l~~H-------~~~VtslafsPdg~~LaSgs~--DGtV~IWDlrt~~~v~~~ 119 (568)
.+. +..+... ......+.|+||+++++++.. ++.|.++|+.+++.+..+
T Consensus 159 ~~v-v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I 216 (426)
T 3c75_H 159 FLP-IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRML 216 (426)
T ss_dssp CCE-EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred CcE-EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEE
Confidence 874 3333211 234567899999999998874 578999999987765544
No 221
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.49 E-value=6.5e-06 Score=87.25 Aligned_cols=198 Identities=11% Similarity=0.038 Sum_probs=129.2
Q ss_pred CccCCCCEEEEEEC--CCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC-CCceeEEe
Q 008356 1 MYNCKDEHLASISL--SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG-RSPKVSWL 77 (568)
Q Consensus 1 afSpdG~~LasGs~--DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t-~~~~v~~l 77 (568)
+|+|||++|+++.. ++.|.++|+.+++.+..+... + + ..+.|.+...+++.+.||.+.+.++.. ++. ....
T Consensus 143 a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~--g-~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v-~~~~ 216 (386)
T 3sjl_D 143 SLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP--D-C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP-EITH 216 (386)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC--S-E--EEEEEEETTEEEEEETTSCEEEEECCSSSCC-EEEE
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC--C-c--ceeecCCCceeEEECCCCCEEEEECCCCCeE-EEee
Confidence 37899999998874 689999999999999888742 2 1 123355544677888999999999865 442 2211
Q ss_pred ccC----CCCeE-EEEEc-CCCCEEEEEeCCCeEEEEECCCCce--eeEee-----------cCCCeEEEEEecCCCEEE
Q 008356 78 KQH----SAPTA-GISFS-SDDKIIASVGLDKKLYTYDPGSRRP--SSCIT-----------YEAPFSSLAFIDDDWILT 138 (568)
Q Consensus 78 ~~H----~~~Vt-slafs-Pdg~~LaSgs~DGtV~IWDlrt~~~--v~~~~-----------h~~~ItsLafsPdg~~La 138 (568)
..+ ..++. ...|. +++++++ .+.+|.|++.|+.++.. +..+. ..+.+..++++++++.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~ly 295 (386)
T 3sjl_D 217 TEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIY 295 (386)
T ss_dssp CCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEE
T ss_pred cceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEE
Confidence 111 12222 24665 4665444 66689999999976642 22221 123345678899999888
Q ss_pred EEEc----------CCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCC
Q 008356 139 AGTS----------NGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (568)
Q Consensus 139 sGs~----------DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDl 208 (568)
+... .+.|.++|+.+.+ .+..+. -...+..|.++++++. .++++...++.|.++|.
T Consensus 296 V~~~~~~~~~hk~~~~~V~viD~~t~k-v~~~i~---vg~~~~~lavs~D~~~----------~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 296 LLVDQRDEWRHKTASRFVVVLDAKTGE-RLAKFE---MGHEIDSINVSQDEKP----------LLYALSTGDKTLYIHDA 361 (386)
T ss_dssp EEEEECCTTCTTSCEEEEEEEETTTCC-EEEEEE---EEEEECEEEECSSSSC----------EEEEEETTTTEEEEEET
T ss_pred EEeccccccccCCCCCEEEEEECCCCe-EEEEEE---CCCCcceEEECCCCCe----------EEEEEcCCCCeEEEEEC
Confidence 8753 2579999999984 334443 2246889999997541 12333345889999998
Q ss_pred CCCCccccccc
Q 008356 209 LPSVTTSSVSL 219 (568)
Q Consensus 209 r~~~~~~s~~~ 219 (568)
.......+...
T Consensus 362 ~t~k~~~~i~~ 372 (386)
T 3sjl_D 362 ESGEELRSVNQ 372 (386)
T ss_dssp TTCCEEEEECC
T ss_pred CCCcEEEEecC
Confidence 87665554433
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.49 E-value=1.6e-06 Score=87.11 Aligned_cols=172 Identities=9% Similarity=0.114 Sum_probs=109.2
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEee---CCCCCcEEEEEEccCCCeEEEE----EeC-------------CCe
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELK---DPNEQVLRVLDYSRNSRHLLVT----AGD-------------DGT 61 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~---~~h~~~Vs~Lafspdg~~lLaT----gs~-------------DGt 61 (568)
+.++|+++++...++.|.+|+.. ++...... +.....++++++.++|+ ++++ |.. .+.
T Consensus 93 ~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~ 170 (305)
T 3dr2_A 93 VDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHS 170 (305)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEE
T ss_pred ECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCe
Confidence 57888866655556789999975 55332221 11123356799999997 6665 332 256
Q ss_pred EEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCC------CeEEEEECCCCcee--eEe--ecCCCeEEEEEe
Q 008356 62 LHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD------KKLYTYDPGSRRPS--SCI--TYEAPFSSLAFI 131 (568)
Q Consensus 62 V~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~D------GtV~IWDlrt~~~v--~~~--~h~~~ItsLafs 131 (568)
|+.||..+++.. .+. .....+.++|+|+++.|+.+... +.|++||+..+... ..+ ........++++
T Consensus 171 v~~~d~~~g~~~--~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d 247 (305)
T 3dr2_A 171 VYRLPPDGSPLQ--RMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVD 247 (305)
T ss_dssp EEEECSSSCCCE--EEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEEC
T ss_pred EEEEcCCCCcEE--EEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEEC
Confidence 777777655532 222 44567899999999988777665 78999998765411 111 123456678999
Q ss_pred cCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 008356 132 DDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 132 Pdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~ 185 (568)
++|++. ++..+ .|.+||.... .+..+.. + ..+.+++|.++++.|..+
T Consensus 248 ~~G~lw-v~~~~-gv~~~~~~g~--~~~~~~~--~-~~~~~~~f~~d~~~L~it 294 (305)
T 3dr2_A 248 RGGWLW-SSSGT-GVCVFDSDGQ--LLGHIPT--P-GTASNCTFDQAQQRLFIT 294 (305)
T ss_dssp TTSCEE-ECCSS-EEEEECTTSC--EEEEEEC--S-SCCCEEEECTTSCEEEEE
T ss_pred CCCCEE-EecCC-cEEEECCCCC--EEEEEEC--C-CceeEEEEeCCCCEEEEE
Confidence 999954 44444 5999998643 3344442 2 358889998876554433
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.47 E-value=1.2e-05 Score=86.68 Aligned_cols=192 Identities=8% Similarity=0.030 Sum_probs=127.2
Q ss_pred CCCCEEEEEE-CCCcEEEEECCCC----ceeEEee------CCCCCcEEEEEEccCCCeEEEEEeCC------CeEEEEE
Q 008356 4 CKDEHLASIS-LSGDLILHNLASG----AKAAELK------DPNEQVLRVLDYSRNSRHLLVTAGDD------GTLHLWD 66 (568)
Q Consensus 4 pdG~~LasGs-~DG~V~VWDl~tg----~~v~~l~------~~h~~~Vs~Lafspdg~~lLaTgs~D------GtV~VWD 66 (568)
.++++|++.+ .++.|+|+|+.+. +.++.+. ......-+.+.+.|++ +++++..+ |.|.++|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEE
Confidence 7788877654 6789999998754 4555552 0011134557788998 66666555 7899999
Q ss_pred CCCCCceeEEeccC--C-CCeEEEEEcCCCCEEEEEe-------------------CCCeEEEEECCCCceeeEeecC--
Q 008356 67 TTGRSPKVSWLKQH--S-APTAGISFSSDDKIIASVG-------------------LDKKLYTYDPGSRRPSSCITYE-- 122 (568)
Q Consensus 67 l~t~~~~v~~l~~H--~-~~VtslafsPdg~~LaSgs-------------------~DGtV~IWDlrt~~~v~~~~h~-- 122 (568)
..+.+. +..+... . ..-+.+.|+|+++.+++.. .+.+|.+||+.+++.+..+...
T Consensus 171 ~~T~~v-~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 171 HYSFEP-LGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp TTTCCE-EEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred CCCCeE-EEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 998874 4444422 2 2245688899999888874 3689999999998888777553
Q ss_pred -CCeEEEEE--ecCCCEEEEEEc------CCeEEEEECCCCCC-ceEEEeecCC----------------CCCeeEEEEc
Q 008356 123 -APFSSLAF--IDDDWILTAGTS------NGRVVFYDIRGKPQ-PLTVLRACSS----------------SEAVSSLCWQ 176 (568)
Q Consensus 123 -~~ItsLaf--sPdg~~LasGs~------DG~V~VWDlrt~~~-~v~~l~~~~h----------------~~~VtsLafs 176 (568)
.....++| +|+++++++++. ++.|.+|..+.+.- ..+++..... ......|.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 23556666 999999888775 56888776654210 0111110000 2346778888
Q ss_pred cCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 177 RAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 177 pdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
++|++| +++.-..+.|.+||+.
T Consensus 330 ~DGrfL-----------YVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 330 LDDKFL-----------YLSLWGIGEVRQYDIS 351 (462)
T ss_dssp TTSCEE-----------EEEETTTTEEEEEECS
T ss_pred CCCCEE-----------EEEeCCCCEEEEEEec
Confidence 887665 4445567899999986
No 224
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.46 E-value=1.7e-06 Score=88.79 Aligned_cols=189 Identities=7% Similarity=0.037 Sum_probs=116.6
Q ss_pred ccCCCCEEEEEE--CCCcEEEEECCCCceeEEeeC------CCCCcEEEEEEccCCCeEEEEEeC-----CCeEEEEECC
Q 008356 2 YNCKDEHLASIS--LSGDLILHNLASGAKAAELKD------PNEQVLRVLDYSRNSRHLLVTAGD-----DGTLHLWDTT 68 (568)
Q Consensus 2 fSpdG~~LasGs--~DG~V~VWDl~tg~~v~~l~~------~h~~~Vs~Lafspdg~~lLaTgs~-----DGtV~VWDl~ 68 (568)
++++|+.+++.. .++.+.||.+.+++. ..+.. .+-..+..++++++++ ++++-.. ++.|.+||+.
T Consensus 24 ~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~~~~~~~~i~~~d~~ 101 (343)
T 2qe8_A 24 LTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGNQSKSVPKLVAWDTL 101 (343)
T ss_dssp ECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHHHHTSCCEEEEEETT
T ss_pred ECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCCCcCCCCeEEEEECC
Confidence 678999888764 234355555545543 22211 1335688899999986 5554433 5789999998
Q ss_pred CCCceeEEecc------CCCCeEEEEEcCCCCEE-EEEe---CCCeEEEEECCCCceeeEeec-----------------
Q 008356 69 GRSPKVSWLKQ------HSAPTAGISFSSDDKII-ASVG---LDKKLYTYDPGSRRPSSCITY----------------- 121 (568)
Q Consensus 69 t~~~~v~~l~~------H~~~VtslafsPdg~~L-aSgs---~DGtV~IWDlrt~~~v~~~~h----------------- 121 (568)
+++. +..+.. +...++.+++++++..+ ++-. .++.|.+||+.+++..+.+..
T Consensus 102 tg~~-~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~ 180 (343)
T 2qe8_A 102 NNQL-SRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVP 180 (343)
T ss_dssp TTEE-EEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEE
T ss_pred CCeE-EEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEE
Confidence 7762 222221 23457899999865444 5544 578999999988765554311
Q ss_pred -------------CCCeEEEEEecCCCEEEEEEcCC-eEEEEECCC---CC-------CceEEEeecCCCCCeeEEEEcc
Q 008356 122 -------------EAPFSSLAFIDDDWILTAGTSNG-RVVFYDIRG---KP-------QPLTVLRACSSSEAVSSLCWQR 177 (568)
Q Consensus 122 -------------~~~ItsLafsPdg~~LasGs~DG-~V~VWDlrt---~~-------~~v~~l~~~~h~~~VtsLafsp 177 (568)
...+..++|+|++++|+++..++ .|..++... .. ..+..+ ++......+++++
T Consensus 181 ~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---g~~g~pdgia~d~ 257 (343)
T 2qe8_A 181 VQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY---SEKPICDGISIDK 257 (343)
T ss_dssp CBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE---EECCSCSCEEECT
T ss_pred EEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec---ccCCCCceEEECC
Confidence 12357899999999998887665 565555421 10 001111 2333456678877
Q ss_pred CCCeEEEeccCCCCeEEEEecCCCcEEcCCC
Q 008356 178 AKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (568)
Q Consensus 178 dg~~Las~s~ssd~~~Lls~s~Dg~V~VWDl 208 (568)
+|.+ +++...++.|.+||.
T Consensus 258 ~G~l------------~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 258 DHNI------------YVGDLAHSAIGVITS 276 (343)
T ss_dssp TCCE------------EEEEGGGTEEEEEET
T ss_pred CCCE------------EEEccCCCeEEEEEC
Confidence 6544 444455788888886
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.45 E-value=5e-06 Score=94.32 Aligned_cols=178 Identities=14% Similarity=0.166 Sum_probs=118.6
Q ss_pred ccCCCCEEEEEECCCc-------------------EEEEECCCCceeEEeeCCCC--------CcEEEEEEccCCC--eE
Q 008356 2 YNCKDEHLASISLSGD-------------------LILHNLASGAKAAELKDPNE--------QVLRVLDYSRNSR--HL 52 (568)
Q Consensus 2 fSpdG~~LasGs~DG~-------------------V~VWDl~tg~~v~~l~~~h~--------~~Vs~Lafspdg~--~l 52 (568)
|.+++++|+++..++. |..+|..+|+.+..++..+. ..+.......+++ .+
T Consensus 242 ~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~ 321 (689)
T 1yiq_A 242 YDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKV 321 (689)
T ss_dssp EETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEE
T ss_pred EcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEE
Confidence 4667888888877763 99999999999888765321 1111122222442 36
Q ss_pred EEEEeCCCeEEEEECCCCCceeEEeccCCC--------------------------------------CeEEEEEcCCCC
Q 008356 53 LVTAGDDGTLHLWDTTGRSPKVSWLKQHSA--------------------------------------PTAGISFSSDDK 94 (568)
Q Consensus 53 LaTgs~DGtV~VWDl~t~~~~v~~l~~H~~--------------------------------------~VtslafsPdg~ 94 (568)
++.++.+|.|+++|..+++.+...-..... .-..++|+|+..
T Consensus 322 v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~ 401 (689)
T 1yiq_A 322 LMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTG 401 (689)
T ss_dssp EEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTT
T ss_pred EEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCC
Confidence 888999999999999888743211111000 011267888777
Q ss_pred EEEEEeC---------------------------------------------CCeEEEEECCCCceeeEeecCCCeEEEE
Q 008356 95 IIASVGL---------------------------------------------DKKLYTYDPGSRRPSSCITYEAPFSSLA 129 (568)
Q Consensus 95 ~LaSgs~---------------------------------------------DGtV~IWDlrt~~~v~~~~h~~~ItsLa 129 (568)
++++... +|.|+.||+.+++.+..+.+..++....
T Consensus 402 ~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~ 481 (689)
T 1yiq_A 402 LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFNGGT 481 (689)
T ss_dssp EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCCCCE
T ss_pred EEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCccCcc
Confidence 7776522 3789999999999988887666555556
Q ss_pred EecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCe
Q 008356 130 FIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPV 181 (568)
Q Consensus 130 fsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~ 181 (568)
+...+.++++|+.||.|+.||.++++...+ ++. ++.....-+.|..+|+.
T Consensus 482 ~~tagglvf~gt~dg~l~a~D~~tG~~lw~-~~~-~~~~~~~p~ty~~~G~q 531 (689)
T 1yiq_A 482 LSTAGNLVFEGSADGRVIAYAADTGEKLWE-QPA-ASGVMAAPVTYSVDGEQ 531 (689)
T ss_dssp EEETTTEEEEECTTSEEEEEETTTCCEEEE-EEC-SSCCCSCCEEEEETTEE
T ss_pred ceECCCEEEEECCCCcEEEEECCCCcccee-eeC-CCCcccCceEEEECCEE
Confidence 667788999999999999999999854333 331 22222334667676654
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.42 E-value=8e-06 Score=92.43 Aligned_cols=179 Identities=12% Similarity=0.176 Sum_probs=122.0
Q ss_pred ccCCCCEEEEEECCC-------------------cEEEEECCCCceeEEeeCCCC--------CcEEEEEEccCCC--eE
Q 008356 2 YNCKDEHLASISLSG-------------------DLILHNLASGAKAAELKDPNE--------QVLRVLDYSRNSR--HL 52 (568)
Q Consensus 2 fSpdG~~LasGs~DG-------------------~V~VWDl~tg~~v~~l~~~h~--------~~Vs~Lafspdg~--~l 52 (568)
|.+++++|+++..++ .|..+|..+|+.+..++..+. .....+....+|+ .+
T Consensus 250 ~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~ 329 (677)
T 1kb0_A 250 FDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKV 329 (677)
T ss_dssp EETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEE
T ss_pred EcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeE
Confidence 456788888877654 499999999999887764321 1112233444663 47
Q ss_pred EEEEeCCCeEEEEECCCCCceeEEeccC----------CCCe------------------------EEEEEcCCCCEEEE
Q 008356 53 LVTAGDDGTLHLWDTTGRSPKVSWLKQH----------SAPT------------------------AGISFSSDDKIIAS 98 (568)
Q Consensus 53 LaTgs~DGtV~VWDl~t~~~~v~~l~~H----------~~~V------------------------tslafsPdg~~LaS 98 (568)
++.++.+|.|+++|..+++.+...-... ..++ ..++|+|+..++++
T Consensus 330 l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv 409 (677)
T 1kb0_A 330 ILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYL 409 (677)
T ss_dssp EEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEE
T ss_pred EEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEE
Confidence 8999999999999999887432221110 0111 14688898888777
Q ss_pred EeC-------------------------------------------CCeEEEEECCCCceeeEeecCCCeEEEEEecCCC
Q 008356 99 VGL-------------------------------------------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDW 135 (568)
Q Consensus 99 gs~-------------------------------------------DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~ 135 (568)
... .+.|..||+.+++.+..+.+..++....+...+.
T Consensus 410 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~~~g~ 489 (677)
T 1kb0_A 410 PAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGN 489 (677)
T ss_dssp EEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTT
T ss_pred eChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCCCCcCcceEeCCC
Confidence 543 2789999999999988887776666666777888
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeE
Q 008356 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVF 182 (568)
Q Consensus 136 ~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~L 182 (568)
++++++.||.|++||.++++.. ..+.. ++.....-+.|..+|+.+
T Consensus 490 ~v~~g~~dg~l~a~D~~tG~~l-w~~~~-~~~~~~~p~~y~~~G~~~ 534 (677)
T 1kb0_A 490 VVFQGTADGRLVAYHAATGEKL-WEAPT-GTGVVAAPSTYMVDGRQY 534 (677)
T ss_dssp EEEEECTTSEEEEEETTTCCEE-EEEEC-SSCCCSCCEEEEETTEEE
T ss_pred EEEEECCCCcEEEEECCCCcee-eeeeC-CCCcccCCEEEEeCCEEE
Confidence 9999999999999999998543 33331 333333445666766543
No 227
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.41 E-value=1.2e-05 Score=80.64 Aligned_cols=172 Identities=14% Similarity=0.215 Sum_probs=113.9
Q ss_pred ccCCCCEEEEEECCC--cEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 008356 2 YNCKDEHLASISLSG--DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (568)
Q Consensus 2 fSpdG~~LasGs~DG--~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~ 79 (568)
|+ ++.+..+.+.+| .|+++|+++++.+..+.......-..+++ +++.+++..-.++.+.+||..+.+. +..+..
T Consensus 50 ~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~ltw~~~~v~v~D~~t~~~-~~ti~~ 125 (262)
T 3nol_A 50 YR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLTWKNGLGFVWNIRNLRQ-VRSFNY 125 (262)
T ss_dssp EE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEEEEETTTCCE-EEEEEC
T ss_pred EE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEEeeCCEEEEEECccCcE-EEEEEC
Confidence 44 555566666666 89999999999988887533222223444 3555666666789999999988874 444443
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeec---C---CCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 008356 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY---E---APFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 80 H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h---~---~~ItsLafsPdg~~LasGs~DG~V~VWDlrt 153 (568)
.. ....+.++++.|+....++.|.++|..+.+.+..+.- . ..++.+.|. +|++.+..-.++.|.+.|+++
T Consensus 126 ~~---eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 126 DG---EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp SS---CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTT
T ss_pred CC---CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCC
Confidence 22 1123335677777666688999999999988877642 1 335667887 676555454688999999998
Q ss_pred CCCceEEEeecC----------CCCCeeEEEEccCCCeE
Q 008356 154 KPQPLTVLRACS----------SSEAVSSLCWQRAKPVF 182 (568)
Q Consensus 154 ~~~~v~~l~~~~----------h~~~VtsLafspdg~~L 182 (568)
++ ....+...+ .....+.|+|+|+++.|
T Consensus 202 G~-V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~l 239 (262)
T 3nol_A 202 GK-VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRL 239 (262)
T ss_dssp CB-EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEE
T ss_pred Cc-EEEEEECCcCccccccccCcCCceEEEEEcCCCCEE
Confidence 83 445554321 12356889999975443
No 228
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.39 E-value=0.0001 Score=72.22 Aligned_cols=187 Identities=12% Similarity=0.044 Sum_probs=119.0
Q ss_pred CCEEEEEECCCcEEEEECCCCcee-----EEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 6 DEHLASISLSGDLILHNLASGAKA-----AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 6 G~~LasGs~DG~V~VWDl~tg~~v-----~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
|.+|+.+.. +.|+.+++...... ..+.. .......++|+++++.++++-..++.|.++|.++... .......
T Consensus 1 ~~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~-~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~~~~ 77 (267)
T 1npe_A 1 GTHLLFAQT-GKIERLPLERNTMKKTEAKAFLHI-PAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-TTIIRQD 77 (267)
T ss_dssp CEEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEE-EEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-EEEECTT
T ss_pred CcEEEEEcC-CeEEEEEecCcccccccceeeecC-CCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-EEEEECC
Confidence 345666653 47999998654321 11221 1234678999998776677766789999999987653 2333333
Q ss_pred CCCeEEEEEcCCCCEEE-EEeCCCeEEEEECCCCceeeEeec-CCCeEEEEEecCCCEEEEEEc---CCeEEEEECCCCC
Q 008356 81 SAPTAGISFSSDDKIIA-SVGLDKKLYTYDPGSRRPSSCITY-EAPFSSLAFIDDDWILTAGTS---NGRVVFYDIRGKP 155 (568)
Q Consensus 81 ~~~VtslafsPdg~~La-Sgs~DGtV~IWDlrt~~~v~~~~h-~~~ItsLafsPdg~~LasGs~---DG~V~VWDlrt~~ 155 (568)
......+++++++..|+ +-...+.|.++|+........... ......++++|++..|+.+.. .+.|..++++...
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~ 157 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN 157 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC
Confidence 35689999999655554 445678999999875443333322 256789999997666666554 4689999987643
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 156 ~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
. ..+.. ........+++++++..| +++....+.|.++|+.
T Consensus 158 ~--~~~~~-~~~~~P~gia~d~~~~~l-----------yv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 158 R--RILAQ-DNLGLPNGLTFDAFSSQL-----------CWVDAGTHRAECLNPA 197 (267)
T ss_dssp C--EEEEC-TTCSCEEEEEEETTTTEE-----------EEEETTTTEEEEEETT
T ss_pred c--EEEEE-CCCCCCcEEEEcCCCCEE-----------EEEECCCCEEEEEecC
Confidence 2 22221 223467889999865443 4444456777777764
No 229
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.35 E-value=3.7e-06 Score=88.50 Aligned_cols=172 Identities=12% Similarity=0.029 Sum_probs=113.1
Q ss_pred CccCCCCEEEEEE----------CCCcEEEEECCCCceeEEeeCCC------CCcEEEEEEccCCCeEEEEEeC--CCeE
Q 008356 1 MYNCKDEHLASIS----------LSGDLILHNLASGAKAAELKDPN------EQVLRVLDYSRNSRHLLVTAGD--DGTL 62 (568)
Q Consensus 1 afSpdG~~LasGs----------~DG~V~VWDl~tg~~v~~l~~~h------~~~Vs~Lafspdg~~lLaTgs~--DGtV 62 (568)
+|+||+++++++. .++.|.+||+.+++.+.++..+. ......+.++|+|+. ++++.. +..|
T Consensus 71 ~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~-lyVan~~~~~~v 149 (368)
T 1mda_H 71 VAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSAC-LLFFLFGSSAAA 149 (368)
T ss_dssp EECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSC-EEEEECSSSCEE
T ss_pred EECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCE-EEEEccCCCCeE
Confidence 4789999999886 36889999999999999886431 012345889999985 555443 4567
Q ss_pred EE--EECCC------CCc--------------------eeEEecc-----------------------------------
Q 008356 63 HL--WDTTG------RSP--------------------KVSWLKQ----------------------------------- 79 (568)
Q Consensus 63 ~V--WDl~t------~~~--------------------~v~~l~~----------------------------------- 79 (568)
.+ +|..+ ..+ ....+..
T Consensus 150 ~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs 229 (368)
T 1mda_H 150 GLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAV 229 (368)
T ss_dssp EEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECB
T ss_pred EEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEc
Confidence 77 77632 000 0000000
Q ss_pred -----------CC---------------------CCeEEEEEcCCCCEEEEEeC---------CCeEEEEECCCCceeeE
Q 008356 80 -----------HS---------------------APTAGISFSSDDKIIASVGL---------DKKLYTYDPGSRRPSSC 118 (568)
Q Consensus 80 -----------H~---------------------~~VtslafsPdg~~LaSgs~---------DGtV~IWDlrt~~~v~~ 118 (568)
.. .....+++++++++++.+.. ++.+.++|+.+.+.+..
T Consensus 230 ~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~ 309 (368)
T 1mda_H 230 ASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP 309 (368)
T ss_dssp SSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEEC
T ss_pred CCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEE
Confidence 00 00011678888888876533 23567999999999888
Q ss_pred eecCCCeEEEEEecCCCE-EEEEE-cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEcc
Q 008356 119 ITYEAPFSSLAFIDDDWI-LTAGT-SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQR 177 (568)
Q Consensus 119 ~~h~~~ItsLafsPdg~~-LasGs-~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafsp 177 (568)
+........++|++||++ +++.. .++.|.++|+.+.+ .++.+. -......+++++
T Consensus 310 i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~k-vv~~I~---vg~~P~~i~~~~ 366 (368)
T 1mda_H 310 ISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQ-DQSSVE---LDKGPESLSVQN 366 (368)
T ss_dssp CEEEEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCE-EEEECC---CCSCCCEEECCC
T ss_pred EECCCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCc-EEEEEE---CCCCCCEEEeec
Confidence 866667999999999974 55555 58999999999873 333332 334455666654
No 230
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.34 E-value=1.2e-05 Score=89.26 Aligned_cols=192 Identities=10% Similarity=-0.047 Sum_probs=134.3
Q ss_pred CCCCEEEEEEC-CCcEEEEECCCCceeEEeeCCCCCcEEEEEE-c-cCCCeEEEEEe------------------CCCeE
Q 008356 4 CKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDY-S-RNSRHLLVTAG------------------DDGTL 62 (568)
Q Consensus 4 pdG~~LasGs~-DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Laf-s-pdg~~lLaTgs------------------~DGtV 62 (568)
+||++|++... ++.|.+.|+.+.++...+..........+++ . |++++ +++++ .++.|
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~-v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNY-VFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSE-EEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcE-EEEecccccccCCCCcccccccccCceE
Confidence 47888888766 4569999999999888665545556788888 4 89984 55553 34679
Q ss_pred EEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCC--------------------------------------e
Q 008356 63 HLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDK--------------------------------------K 104 (568)
Q Consensus 63 ~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DG--------------------------------------t 104 (568)
.+.|..+.+. ...+.... ....++++|+++++++.+.+. .
T Consensus 178 tvID~~t~~v-~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~ 255 (595)
T 1fwx_A 178 TAVDADKWEV-AWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNG 255 (595)
T ss_dssp EEEETTTTEE-EEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETT
T ss_pred EEEECCCCeE-EEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECc
Confidence 9999988763 33333222 346678999999998887553 3
Q ss_pred EEEEECCC--Cce-eeEeecCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCCCCCc--------eEEEeecCCCCCeeE
Q 008356 105 LYTYDPGS--RRP-SSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQP--------LTVLRACSSSEAVSS 172 (568)
Q Consensus 105 V~IWDlrt--~~~-v~~~~h~~~ItsLafsPdg~~LasGs-~DG~V~VWDlrt~~~~--------v~~l~~~~h~~~Vts 172 (568)
|.+.|.++ ++. +..+.......++.++|||+++++.+ .+..|.++|+.+.+.. ........-......
T Consensus 256 V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h 335 (595)
T 1fwx_A 256 VKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLH 335 (595)
T ss_dssp EEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEE
T ss_pred EEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcce
Confidence 77888887 444 55665566778899999999888766 5789999999854210 011111223456788
Q ss_pred EEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 173 LCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 173 Lafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
++|+++| ..+++.-.|++|.+||+..
T Consensus 336 ~aF~~dG------------~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 336 TAFDGRG------------NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEECTTS------------EEEEEETTTTEEEEEEHHH
T ss_pred EEECCCC------------eEEEEEecCCcEEEEEhhH
Confidence 9999975 3445556689999999755
No 231
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.33 E-value=0.00042 Score=67.76 Aligned_cols=191 Identities=10% Similarity=0.007 Sum_probs=118.6
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 2 fSpdG~~LasGs-~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
|+++++.|+.+. .++.|.++++........+.. .......+++++++.+++++-..++.|.++++++... .......
T Consensus 43 ~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~-~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~~ 120 (267)
T 1npe_A 43 FDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQ-DLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDTG 120 (267)
T ss_dssp EETTTTEEEEEETTTTEEEEEESSSCCCEEEECT-TCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSS
T ss_pred EecCCCEEEEEECCCCEEEEEecCCCCcEEEEEC-CCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEECC
Confidence 567666666665 467899999865543333322 2245678999997765667766788999999976542 2222223
Q ss_pred CCCeEEEEEcCCCCEEEEEeC---CCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCCCC
Q 008356 81 SAPTAGISFSSDDKIIASVGL---DKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKP 155 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~---DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs-~DG~V~VWDlrt~~ 155 (568)
......++++|++..|+.+.. .+.|..+++......... ........+++++++..|+.+. ..+.|.++|+....
T Consensus 121 ~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 200 (267)
T 1npe_A 121 LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG 200 (267)
T ss_dssp CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc
Confidence 356799999996666555553 468988888643322222 2234678999999877666555 56889999998642
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCC
Q 008356 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPS 211 (568)
Q Consensus 156 ~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~ 211 (568)
....+. .......++.. ++.++++....+.|.++|....
T Consensus 201 -~~~~~~---~~~~P~gi~~d-------------~~~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 201 -RRKVLE---GLQYPFAVTSY-------------GKNLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp -EEEEEE---CCCSEEEEEEE-------------TTEEEEEETTTTEEEEEETTTT
T ss_pred -eEEEec---CCCCceEEEEe-------------CCEEEEEECCCCeEEEEeCCCC
Confidence 222222 11223445432 2344455555677777776543
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.31 E-value=2.9e-05 Score=83.61 Aligned_cols=181 Identities=13% Similarity=0.075 Sum_probs=119.3
Q ss_pred ccCCCCEEEEEECC------CcEEEEECCCCceeEEeeCCC--CCcEEEEEEccCCCeEEEEEe----------------
Q 008356 2 YNCKDEHLASISLS------GDLILHNLASGAKAAELKDPN--EQVLRVLDYSRNSRHLLVTAG---------------- 57 (568)
Q Consensus 2 fSpdG~~LasGs~D------G~V~VWDl~tg~~v~~l~~~h--~~~Vs~Lafspdg~~lLaTgs---------------- 57 (568)
..|+| .++++..+ |.|.++|.++.+.+..+.... ...-..+-|+|+++ .+++..
T Consensus 145 ~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~ 222 (462)
T 2ece_A 145 CGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHL 222 (462)
T ss_dssp ECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTH
T ss_pred ECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhh
Confidence 35788 66655444 789999999999998886321 22234578899998 677764
Q ss_pred ---CCCeEEEEECCCCCceeEEeccC--CCCeEEEEE--cCCCCEEEEEe------CCCeEEEEECCCCce--eeEe--e
Q 008356 58 ---DDGTLHLWDTTGRSPKVSWLKQH--SAPTAGISF--SSDDKIIASVG------LDKKLYTYDPGSRRP--SSCI--T 120 (568)
Q Consensus 58 ---~DGtV~VWDl~t~~~~v~~l~~H--~~~Vtslaf--sPdg~~LaSgs------~DGtV~IWDlrt~~~--v~~~--~ 120 (568)
.+.+|.+||+.+.+ .+..+... ......+.| +|+++++++++ .+++|.+|....++. ...+ .
T Consensus 223 ~~~~~d~V~v~D~~~~k-~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~ 301 (462)
T 2ece_A 223 KDRYGNRIHFWDLRKRK-RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIP 301 (462)
T ss_dssp HHHSCCEEEEEETTTTE-EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEEC
T ss_pred hhccCCEEEEEECCCCc-EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCC
Confidence 37899999998765 34444432 123455656 99999887776 566887766544321 1111 0
Q ss_pred c-----------------CCCeEEEEEecCCCEEEEEEc-CCeEEEEECCCCCCc--eEEEeecCC------------CC
Q 008356 121 Y-----------------EAPFSSLAFIDDDWILTAGTS-NGRVVFYDIRGKPQP--LTVLRACSS------------SE 168 (568)
Q Consensus 121 h-----------------~~~ItsLafsPdg~~LasGs~-DG~V~VWDlrt~~~~--v~~l~~~~h------------~~ 168 (568)
. ......|.+++||++|+++.. .+.|.+||+.....+ +..+..-+. .+
T Consensus 302 ~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~g 381 (462)
T 2ece_A 302 AEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTG 381 (462)
T ss_dssp CEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCS
T ss_pred CccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCC
Confidence 0 245788999999999998875 688999999643222 222321111 01
Q ss_pred CeeEEEEccCCCeEEEe
Q 008356 169 AVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 169 ~VtsLafspdg~~Las~ 185 (568)
....++++|+|++|+..
T Consensus 382 gPr~~~lSpDGk~LyVa 398 (462)
T 2ece_A 382 APQMLEISRDGRRVYVT 398 (462)
T ss_dssp CCCCEEECTTSSEEEEE
T ss_pred CCCEEEEcCCCCEEEEE
Confidence 35789999999888776
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.27 E-value=1.5e-05 Score=83.80 Aligned_cols=101 Identities=4% Similarity=-0.079 Sum_probs=72.8
Q ss_pred CEEEEEE-CCC----cEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEe---------CCCeEEEEECCCCCc
Q 008356 7 EHLASIS-LSG----DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG---------DDGTLHLWDTTGRSP 72 (568)
Q Consensus 7 ~~LasGs-~DG----~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs---------~DGtV~VWDl~t~~~ 72 (568)
.++++.. .++ +|.++|..+++.+..+..... . .+.++|+++.++++.. .++.|.+||..+.+.
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~-P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFL-S--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTT-C--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCCCC-C--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 4444443 344 888999999999999886544 3 5999999985555442 478999999999884
Q ss_pred eeEEeccC-------CCCeEEEEEcCCCCEEEEEeC--CCeEEE--EECC
Q 008356 73 KVSWLKQH-------SAPTAGISFSSDDKIIASVGL--DKKLYT--YDPG 111 (568)
Q Consensus 73 ~v~~l~~H-------~~~VtslafsPdg~~LaSgs~--DGtV~I--WDlr 111 (568)
+..+..+ ......+.++||+++++++.. +..|.+ +|+.
T Consensus 109 -v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~ 157 (368)
T 1mda_H 109 -IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGAS 157 (368)
T ss_dssp -EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTE
T ss_pred -EEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchh
Confidence 4454432 134567999999999988874 356777 7773
No 234
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.22 E-value=4.8e-05 Score=81.59 Aligned_cols=155 Identities=12% Similarity=0.071 Sum_probs=98.7
Q ss_pred CccCCCCEEEEEEC--CCcEEEEECCCCceeEEeeCCCCCcE------EEEEEccCCCeE--------------------
Q 008356 1 MYNCKDEHLASISL--SGDLILHNLASGAKAAELKDPNEQVL------RVLDYSRNSRHL-------------------- 52 (568)
Q Consensus 1 afSpdG~~LasGs~--DG~V~VWDl~tg~~v~~l~~~h~~~V------s~Lafspdg~~l-------------------- 52 (568)
+|+|||++|+++.. ++.|.+.|+.+++.+..+.......+ ..+.++++++.+
T Consensus 183 ~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~ 262 (426)
T 3c75_H 183 ALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTE 262 (426)
T ss_dssp EECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCT
T ss_pred EEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccC
Confidence 37899999999874 57899999999998877764211000 012333333311
Q ss_pred ----------------EEEEeCCCeEEEEECCCCCcee-EEec---c-------CCCCeEEEEEcCCCCEEEEEeC----
Q 008356 53 ----------------LVTAGDDGTLHLWDTTGRSPKV-SWLK---Q-------HSAPTAGISFSSDDKIIASVGL---- 101 (568)
Q Consensus 53 ----------------LaTgs~DGtV~VWDl~t~~~~v-~~l~---~-------H~~~VtslafsPdg~~LaSgs~---- 101 (568)
++.....+.|.+.|+......+ ..+. . .......++++++++++++...
T Consensus 263 ~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~ 342 (426)
T 3c75_H 263 DELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDE 342 (426)
T ss_dssp TSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCT
T ss_pred CCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEeccccc
Confidence 1111223334444443222000 0000 0 0111223688998887766542
Q ss_pred ------CCeEEEEECCCCceeeEeecCCCeEEEEEecCCC-EEEEEE-cCCeEEEEECCCCC
Q 008356 102 ------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDW-ILTAGT-SNGRVVFYDIRGKP 155 (568)
Q Consensus 102 ------DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~-~LasGs-~DG~V~VWDlrt~~ 155 (568)
++.|.++|+.+.+.+..+........++|+||++ ++++.. .++.|.|+|+.+.+
T Consensus 343 gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~k 404 (426)
T 3c75_H 343 WKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGE 404 (426)
T ss_dssp TCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred ccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCC
Confidence 3579999999999999887666789999999999 888888 59999999999884
No 235
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.22 E-value=0.00018 Score=71.48 Aligned_cols=168 Identities=10% Similarity=0.100 Sum_probs=110.9
Q ss_pred CCEEEEEECC--CcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCC
Q 008356 6 DEHLASISLS--GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAP 83 (568)
Q Consensus 6 G~~LasGs~D--G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~ 83 (568)
+.+..+.+.+ ..|+++|+++++.+..+.......-..+++. ++.+++..-.++.+.+||..+.+. +..+.....
T Consensus 31 ~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~-~~ti~~~~~- 106 (243)
T 3mbr_X 31 GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTP-RARFRYPGE- 106 (243)
T ss_dssp TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEE-EEEEECSSC-
T ss_pred CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcE-EEEEeCCCC-
Confidence 4444555554 4899999999999988875333222334443 455667767899999999988774 444443222
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecC------CCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCc
Q 008356 84 TAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYE------APFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (568)
Q Consensus 84 VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~------~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~ 157 (568)
-..++ +++..|+....+++|.++|..+.+.+..+... ..++.+.|. +|++.+..-.+..|.+.|+++++ .
T Consensus 107 Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~-V 182 (243)
T 3mbr_X 107 GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGK-V 182 (243)
T ss_dssp CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCB-E
T ss_pred ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCC-E
Confidence 23444 45666666677899999999999888777421 345677776 56655445468899999999884 4
Q ss_pred eEEEeecC-----------CCCCeeEEEEccCCCe
Q 008356 158 LTVLRACS-----------SSEAVSSLCWQRAKPV 181 (568)
Q Consensus 158 v~~l~~~~-----------h~~~VtsLafspdg~~ 181 (568)
+..+...+ .....+.|+|+|+++.
T Consensus 183 ~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~ 217 (243)
T 3mbr_X 183 VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDR 217 (243)
T ss_dssp EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTE
T ss_pred EEEEECCcCccccccccCCcCCceEEEEEcCCCCE
Confidence 44444221 1235688999996443
No 236
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.21 E-value=8.8e-05 Score=74.55 Aligned_cols=167 Identities=11% Similarity=0.047 Sum_probs=112.6
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeE
Q 008356 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTA 85 (568)
Q Consensus 6 G~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~Vt 85 (568)
+.+.++.+.+|.|+++|+++++.+..+ ......-..+++ +++.+++..-.++.+.+||..+.+. +..+..... -.
T Consensus 65 ~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~-~~ti~~~~e-Gw 139 (268)
T 3nok_A 65 GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQR-ERTTRYSGE-GW 139 (268)
T ss_dssp TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEE-EEEEECSSC-CC
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcE-EEEEeCCCc-ee
Confidence 445566677889999999999988877 322222233444 4455677777899999999988874 444443222 23
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeec---C---CCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceE
Q 008356 86 GISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY---E---APFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLT 159 (568)
Q Consensus 86 slafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h---~---~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~ 159 (568)
.++ ++++.|+.+..+++|.++|..+.+.+..+.- . ..++.+.|. +|++.+..-.++.|.+.|+++++ .+.
T Consensus 140 GLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~-V~~ 215 (268)
T 3nok_A 140 GLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGT-VVG 215 (268)
T ss_dssp CEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCB-EEE
T ss_pred EEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCc-EEE
Confidence 444 5677887777799999999999988877742 1 245677887 66555444468899999999883 445
Q ss_pred EEeec-----------CCCCCeeEEEEccCCCe
Q 008356 160 VLRAC-----------SSSEAVSSLCWQRAKPV 181 (568)
Q Consensus 160 ~l~~~-----------~h~~~VtsLafspdg~~ 181 (568)
.+... ......+.|+|+|+++.
T Consensus 216 ~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~r 248 (268)
T 3nok_A 216 VIDASALTRAVAGQVTNPEAVLNGIAVEPGSGR 248 (268)
T ss_dssp EEECHHHHHHHTTTCCCTTCCEEEEEECTTTCC
T ss_pred EEECCCCcccccccccCcCCceEEEEEcCCCCE
Confidence 44422 11245788999997443
No 237
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.20 E-value=0.00033 Score=70.61 Aligned_cols=176 Identities=10% Similarity=0.089 Sum_probs=113.4
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCC-------------------CCcEEEEEEcc-CCCeEEEEEeCCCe
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPN-------------------EQVLRVLDYSR-NSRHLLVTAGDDGT 61 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h-------------------~~~Vs~Lafsp-dg~~lLaTgs~DGt 61 (568)
|.++|++++++..++.|..||..+++.. .+.... ......+++.+ +++ |+.+...+.
T Consensus 26 ~d~~g~~l~v~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~--l~v~d~~~~ 102 (322)
T 2fp8_A 26 FDSTNKGFYTSVQDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ--LYIVDCYYH 102 (322)
T ss_dssp CCTTCSSEEEECTTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE--EEEEETTTE
T ss_pred EcCCCCEEEEEcCCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCc--EEEEECCCC
Confidence 5678887888888999999998665433 222100 12467899997 554 555555555
Q ss_pred EEEEECCCCCceeEEecc-----CCCCeEEEEEcC-CCCEEEEEeC-----------------CCeEEEEECCCCceeeE
Q 008356 62 LHLWDTTGRSPKVSWLKQ-----HSAPTAGISFSS-DDKIIASVGL-----------------DKKLYTYDPGSRRPSSC 118 (568)
Q Consensus 62 V~VWDl~t~~~~v~~l~~-----H~~~VtslafsP-dg~~LaSgs~-----------------DGtV~IWDlrt~~~v~~ 118 (568)
|..+|..++.. ..+.. .....+.+++.+ +++++++-.. ++.|..||..+++....
T Consensus 103 i~~~d~~~g~~--~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~ 180 (322)
T 2fp8_A 103 LSVVGSEGGHA--TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL 180 (322)
T ss_dssp EEEECTTCEEC--EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE
T ss_pred EEEEeCCCCEE--EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe
Confidence 88888765432 22211 123578999999 8987776532 36799999887765443
Q ss_pred eecCCCeEEEEEecCCCEEEEE-EcCCeEEEEECCCCCC-ceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 008356 119 ITYEAPFSSLAFIDDDWILTAG-TSNGRVVFYDIRGKPQ-PLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 119 ~~h~~~ItsLafsPdg~~LasG-s~DG~V~VWDlrt~~~-~v~~l~~~~h~~~VtsLafspdg~~Las~ 185 (568)
.........++|++++++|+++ ..++.|.+|++..... ....+.. ..+ ...++++++|.+.++.
T Consensus 181 ~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~l~va~ 246 (322)
T 2fp8_A 181 LKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGHFWVSS 246 (322)
T ss_dssp EEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSCEEEEE
T ss_pred ccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CCC-CCCeEECCCCCEEEEe
Confidence 3333456789999999877666 4568999999985321 1222221 123 7788998887765554
No 238
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.19 E-value=4.8e-06 Score=92.45 Aligned_cols=178 Identities=10% Similarity=-0.000 Sum_probs=117.7
Q ss_pred CCCCEEEEEE------------------CCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCC-----
Q 008356 4 CKDEHLASIS------------------LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG----- 60 (568)
Q Consensus 4 pdG~~LasGs------------------~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DG----- 60 (568)
|+++++++++ .++.|.+.|.++.+.+.++.... ....++++++|+ ++++.+.+.
T Consensus 145 p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg--~pd~~~~spdGk-~~~vt~~~se~~~~ 221 (595)
T 1fwx_A 145 PRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG--NLDNCDADYEGK-WAFSTSYNSEKGMT 221 (595)
T ss_dssp SBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS--CCCCEEECSSSS-EEEEEESCTTCCSS
T ss_pred CCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC--CccceEECCCCC-EEEEEecCcccCcc
Confidence 8899988885 24579999999998888877422 234578899998 455555332
Q ss_pred ---------------------------------eEEEEECCC--CCceeEEeccCCCCeEEEEEcCCCCEEEEEe-CCCe
Q 008356 61 ---------------------------------TLHLWDTTG--RSPKVSWLKQHSAPTAGISFSSDDKIIASVG-LDKK 104 (568)
Q Consensus 61 ---------------------------------tV~VWDl~t--~~~~v~~l~~H~~~VtslafsPdg~~LaSgs-~DGt 104 (568)
.|.|.|..+ +...+..+.. .....++.++|||+++++++ .+.+
T Consensus 222 i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~ 300 (595)
T 1fwx_A 222 LPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPT 300 (595)
T ss_dssp HHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSB
T ss_pred hhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCe
Confidence 355666654 2221222222 23467799999999887766 6789
Q ss_pred EEEEECCCCc------------eeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCC---------CCceEEEee
Q 008356 105 LYTYDPGSRR------------PSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK---------PQPLTVLRA 163 (568)
Q Consensus 105 V~IWDlrt~~------------~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~---------~~~v~~l~~ 163 (568)
|.++|+.+.+ .+..+........++|+++|+..++..-|+.|.+||+... .+.+..+.
T Consensus 301 VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kid- 379 (595)
T 1fwx_A 301 VTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLD- 379 (595)
T ss_dssp EEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEE-
T ss_pred EEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEee-
Confidence 9999998653 3344456677999999999944445567999999999761 23344444
Q ss_pred cCCCCCe-----eEEEEccCCCeEEEecc
Q 008356 164 CSSSEAV-----SSLCWQRAKPVFIDETT 187 (568)
Q Consensus 164 ~~h~~~V-----tsLafspdg~~Las~s~ 187 (568)
.|-.+- ..+.+++||++|++...
T Consensus 380 -V~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 380 -VHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp -CSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred -cccccccceeccceEeCCCCCEEEEcCC
Confidence 222211 22345789999877643
No 239
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.15 E-value=3e-07 Score=96.08 Aligned_cols=144 Identities=14% Similarity=0.069 Sum_probs=77.9
Q ss_pred CCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEE-EEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCC
Q 008356 4 CKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLR-VLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSA 82 (568)
Q Consensus 4 pdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs-~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~ 82 (568)
.++..+++++.||.|+.||.++|+.+..+..+....+. ...+. .+. .+++++.|+.|+.||..+++.. ..+..+.
T Consensus 47 ~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~~-w~~~~~~- 122 (369)
T 2hz6_A 47 VEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEKQ-QTLSSAF- 122 (369)
T ss_dssp ---CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC--------------
T ss_pred cCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCC-EEEEEeCCCEEEEEECCCCcEE-EEecCCC-
Confidence 45667777789999999999999877665532111111 00111 233 5778889999999999888742 2233222
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecCC---CEEEEEEcCCeEEEEECCCCC
Q 008356 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDD---WILTAGTSNGRVVFYDIRGKP 155 (568)
Q Consensus 83 ~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg---~~LasGs~DG~V~VWDlrt~~ 155 (568)
...++|++..+++++.|+.|+.||.++++.+..+.... ....++..+. ..+++++.||.|+.||.++++
T Consensus 123 ---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~-~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 123 ---ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD-YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp -------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred ---cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 23456788889999999999999999998776653211 1222333322 567788999999999999875
No 240
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.14 E-value=7.2e-05 Score=84.57 Aligned_cols=197 Identities=9% Similarity=0.107 Sum_probs=124.3
Q ss_pred CCEEEEEEC------CCcEEEEECCCCceeEEeeCCCCC-------------------------------cEEEEEEccC
Q 008356 6 DEHLASISL------SGDLILHNLASGAKAAELKDPNEQ-------------------------------VLRVLDYSRN 48 (568)
Q Consensus 6 G~~LasGs~------DG~V~VWDl~tg~~v~~l~~~h~~-------------------------------~Vs~Lafspd 48 (568)
+..++++.. +|.|+.||..+|+.+..+...... ....+.++++
T Consensus 174 ~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~ 253 (677)
T 1kb0_A 174 KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAE 253 (677)
T ss_dssp TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETT
T ss_pred CCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCC
Confidence 445666553 689999999999998777642211 1124678888
Q ss_pred CCeEEEEEeCCC-------------------eEEEEECCCCCceeEEecc-CC-------CCeEEEEEcCCC---CEEEE
Q 008356 49 SRHLLVTAGDDG-------------------TLHLWDTTGRSPKVSWLKQ-HS-------APTAGISFSSDD---KIIAS 98 (568)
Q Consensus 49 g~~lLaTgs~DG-------------------tV~VWDl~t~~~~v~~l~~-H~-------~~VtslafsPdg---~~LaS 98 (568)
+. +++.+..++ .|..+|.++++...+.-.. |. ....-+....++ ..++.
T Consensus 254 ~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~ 332 (677)
T 1kb0_A 254 LN-TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILH 332 (677)
T ss_dssp TT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEE
T ss_pred CC-EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEE
Confidence 77 677776654 5999999988843322222 21 122223333467 67899
Q ss_pred EeCCCeEEEEECCCCceeeEeecCC-----------C-e------------------------EEEEEecCCCEEEEEEc
Q 008356 99 VGLDKKLYTYDPGSRRPSSCITYEA-----------P-F------------------------SSLAFIDDDWILTAGTS 142 (568)
Q Consensus 99 gs~DGtV~IWDlrt~~~v~~~~h~~-----------~-I------------------------tsLafsPdg~~LasGs~ 142 (568)
++.+|.|+++|.++++.+..+.... . + ..++++|+..++++...
T Consensus 333 ~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~ 412 (677)
T 1kb0_A 333 APKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQ 412 (677)
T ss_dssp CCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEE
T ss_pred ECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeCh
Confidence 9999999999999999876653210 0 1 14688998888887654
Q ss_pred C-------------------------------------------CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCC
Q 008356 143 N-------------------------------------------GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAK 179 (568)
Q Consensus 143 D-------------------------------------------G~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg 179 (568)
+ |.|..||+.+++...+. . +..++....+...
T Consensus 413 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~-~---~~~~~~~g~~~~~- 487 (677)
T 1kb0_A 413 NVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSV-E---HVSPWNGGTLTTA- 487 (677)
T ss_dssp ECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEE-E---ESSSCCCCEEEET-
T ss_pred hcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeec-C---CCCCCcCcceEeC-
Confidence 2 67888998887432222 1 2222222222222
Q ss_pred CeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCccccccc
Q 008356 180 PVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSSVSL 219 (568)
Q Consensus 180 ~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~~s~~~ 219 (568)
++ +++.++.|+.+++||.+......++..
T Consensus 488 ----------g~-~v~~g~~dg~l~a~D~~tG~~lw~~~~ 516 (677)
T 1kb0_A 488 ----------GN-VVFQGTADGRLVAYHAATGEKLWEAPT 516 (677)
T ss_dssp ----------TT-EEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred ----------CC-EEEEECCCCcEEEEECCCCceeeeeeC
Confidence 23 344457799999999988776555443
No 241
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.06 E-value=0.00017 Score=81.80 Aligned_cols=103 Identities=12% Similarity=0.118 Sum_probs=69.8
Q ss_pred CCcEEEEECCCCceeEEeeCCC-C-----------------------------CcEEEEEEccCCCeEEEEEeCCCe---
Q 008356 15 SGDLILHNLASGAKAAELKDPN-E-----------------------------QVLRVLDYSRNSRHLLVTAGDDGT--- 61 (568)
Q Consensus 15 DG~V~VWDl~tg~~v~~l~~~h-~-----------------------------~~Vs~Lafspdg~~lLaTgs~DGt--- 61 (568)
+|.|+.||..+|+.+..+.... . .....+.++++.. +++.+..++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~-~vy~~~~~g~~w~ 260 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELN-LLYIGVGNGSLWD 260 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCC-EEEEeCCCCCccc
Confidence 6899999999999887765211 0 0112467888776 7888877764
Q ss_pred ----------------EEEEECCCCCceeEEecc-CC-------CCeEEEEEcCCCC---EEEEEeCCCeEEEEECCCCc
Q 008356 62 ----------------LHLWDTTGRSPKVSWLKQ-HS-------APTAGISFSSDDK---IIASVGLDKKLYTYDPGSRR 114 (568)
Q Consensus 62 ----------------V~VWDl~t~~~~v~~l~~-H~-------~~VtslafsPdg~---~LaSgs~DGtV~IWDlrt~~ 114 (568)
|..||.++++...+.-.. |. .++.......+++ .++.++.+|.|+++|.++++
T Consensus 261 ~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 261 PKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp HHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence 999999998854332222 22 1222222223554 78889999999999999999
Q ss_pred eeeE
Q 008356 115 PSSC 118 (568)
Q Consensus 115 ~v~~ 118 (568)
.+..
T Consensus 341 ~l~~ 344 (689)
T 1yiq_A 341 LLSA 344 (689)
T ss_dssp EEEE
T ss_pred Eecc
Confidence 8743
No 242
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.03 E-value=0.0027 Score=64.45 Aligned_cols=185 Identities=8% Similarity=-0.050 Sum_probs=117.5
Q ss_pred EEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC---CceeEEeccCCCCe
Q 008356 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR---SPKVSWLKQHSAPT 84 (568)
Q Consensus 8 ~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~---~~~v~~l~~H~~~V 84 (568)
+|+.+. ...|+..|+...+....+. .......++|++.++.++++-..++.|+.+++.+. ......+.......
T Consensus 3 ~ll~~~-~~~I~~i~~~~~~~~~~~~--~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 79 (316)
T 1ijq_A 3 YLFFTN-RHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 79 (316)
T ss_dssp EEEEEC-BSSEEEEETTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred EEEEEC-CCeEEEEECCCcceEehhc--CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCc
Confidence 344443 4579999998776555444 23456779999877667777777899999999761 21222333333456
Q ss_pred EEEEEcCCC-CEEEEEeCCCeEEEEECCCCceeeEee-cCCCeEEEEEecCCCEEEEEEc-C-CeEEEEECCCCCCceEE
Q 008356 85 AGISFSSDD-KIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTS-N-GRVVFYDIRGKPQPLTV 160 (568)
Q Consensus 85 tslafsPdg-~~LaSgs~DGtV~IWDlrt~~~v~~~~-h~~~ItsLafsPdg~~LasGs~-D-G~V~VWDlrt~~~~v~~ 160 (568)
..+++.+.+ +++++-...+.|.++|+........+. .......++++|.+..|+.... . +.|..++++... .+.
T Consensus 80 ~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~--~~~ 157 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD--IYS 157 (316)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC--EEE
T ss_pred CEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC--eEE
Confidence 889998744 444555678899999987654443333 3457899999997666655554 3 789999987653 222
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 161 l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
+.. ..-.....|+|++++.. ++++....+.|..+|+.
T Consensus 158 ~~~-~~~~~P~gla~d~~~~~-----------lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 158 LVT-ENIQWPNGITLDLLSGR-----------LYWVDSKLHSISSIDVN 194 (316)
T ss_dssp EEC-SSCSCEEEEEEETTTTE-----------EEEEETTTTEEEEEETT
T ss_pred EEE-CCCCCceEEEEeccCCE-----------EEEEECCCCeEEEEecC
Confidence 221 23356789999986444 34444445667777654
No 243
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.02 E-value=0.00053 Score=70.28 Aligned_cols=145 Identities=11% Similarity=0.028 Sum_probs=96.7
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEeeCCC--------CCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 008356 5 KDEHLASISLSGDLILHNLASGAKAAELKDPN--------EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (568)
Q Consensus 5 dG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h--------~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~ 76 (568)
++..|++++.++.|+.+|.++|+.+..+.... ...+...... ++. .++.++.++.|+.+|..+++... .
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~v~v~~~~g~l~a~d~~tG~~~W-~ 128 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGG-HVYIGSEKAQVYALNTSDGTVAW-Q 128 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETT-EEEEEETTSEEEEEETTTCCEEE-E
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eCC-EEEEEcCCCEEEEEECCCCCEEE-E
Confidence 46678888889999999999999887666422 2223222222 233 57788899999999998887432 2
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCe------EEEEEecCCCEEEEEEcCCeEEEEE
Q 008356 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPF------SSLAFIDDDWILTAGTSNGRVVFYD 150 (568)
Q Consensus 77 l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~I------tsLafsPdg~~LasGs~DG~V~VWD 150 (568)
............. .+..++.++.++.|..+|.++++.+........+ ...... +..++++..++.|..+|
T Consensus 129 ~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d 204 (376)
T 3q7m_A 129 TKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVL 204 (376)
T ss_dssp EECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEE
T ss_pred EeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEE
Confidence 2222211111122 2557888889999999999999988777544333 122222 45788888899999999
Q ss_pred CCCCCC
Q 008356 151 IRGKPQ 156 (568)
Q Consensus 151 lrt~~~ 156 (568)
.++++.
T Consensus 205 ~~tG~~ 210 (376)
T 3q7m_A 205 MEQGQM 210 (376)
T ss_dssp TTTCCE
T ss_pred CCCCcE
Confidence 988753
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.98 E-value=0.00018 Score=71.59 Aligned_cols=137 Identities=16% Similarity=0.164 Sum_probs=95.7
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeE
Q 008356 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTA 85 (568)
Q Consensus 6 G~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~Vt 85 (568)
+..|.+++.++.|..+|.. ++....+.. ....+.++...+++. ++.++.++.|..||.. ++. ..........+.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d~~-g~~-~~~~~~~~~~~~ 180 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKT-KKAIYATPIVSEDGT--IYVGSNDNYLYAINPD-GTE-KWRFKTNDAITS 180 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCEECTTSC--EEEECTTSEEEEECTT-SCE-EEEEECSSCCCS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcC-CCceeeeeEEcCCCE--EEEEcCCCEEEEECCC-CCE-eEEEecCCCcee
Confidence 4567778888999999987 777666654 334455566676765 6667888999999988 542 333444455677
Q ss_pred EEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee-cCCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 008356 86 GISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 86 slafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~-h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt 153 (568)
++.+.+++.+++. + +.|..|| .+++.+.... ....+.++...++|. |.+++.++.|..+|...
T Consensus 181 ~~~~d~~g~l~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~g 244 (330)
T 3hxj_A 181 AASIGKDGTIYFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPDG 244 (330)
T ss_dssp CCEECTTCCEEEE-S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTTS
T ss_pred eeEEcCCCEEEEE-e--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCCC
Confidence 7778777775544 4 7799999 6776665553 345678888888775 55677788899887543
No 245
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.93 E-value=0.00048 Score=70.61 Aligned_cols=187 Identities=12% Similarity=0.004 Sum_probs=110.3
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEeeCCCCCc----EEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC
Q 008356 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQV----LRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS 81 (568)
Q Consensus 6 G~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~----Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~ 81 (568)
+..++++..++.|+.+|..+|+.+..+....... ....... + . .++.+..++.|..+|..+++.....-....
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~-~-~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~ 219 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-F-G-AAVVGGDNGRVSAVLMEQGQMIWQQRISQA 219 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-T-T-EEEECCTTTEEEEEETTTCCEEEEEECCC-
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-C-C-EEEEEcCCCEEEEEECCCCcEEEEEecccC
Confidence 4467777788888888888888776665421110 0111222 2 3 577788899999999988774322211111
Q ss_pred C------CeEEEEEcC--CCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 008356 82 A------PTAGISFSS--DDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 82 ~------~VtslafsP--dg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt 153 (568)
. .+..+...| .+..++.++.++.|..+|.++++.+...... ....+... +..|++++.++.|..+|.++
T Consensus 220 ~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~--~~~l~~~~~~g~l~~~d~~t 296 (376)
T 3q7m_A 220 TGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELG-SVNDFIVD--GNRIYLVDQNDRVMALTIDG 296 (376)
T ss_dssp ----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCC-CEEEEEEE--TTEEEEEETTCCEEEEETTT
T ss_pred CCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCC-CCCCceEE--CCEEEEEcCCCeEEEEECCC
Confidence 0 000011122 3567888888999999999999887665432 34444443 67888889999999999998
Q ss_pred CCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCcc
Q 008356 154 KPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVTT 214 (568)
Q Consensus 154 ~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~ 214 (568)
++.... ... .....+...... ++ .++.++.++.|.++|.......
T Consensus 297 G~~~w~-~~~-~~~~~~~~~~~~-------------~~-~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 297 GVTLWT-QSD-LLHRLLTSPVLY-------------NG-NLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp CCEEEE-ECT-TTTSCCCCCEEE-------------TT-EEEEECTTSEEEEEETTTCCEE
T ss_pred CcEEEe-ecc-cCCCcccCCEEE-------------CC-EEEEEeCCCeEEEEECCCCcEE
Confidence 753211 110 111112212111 12 3444555888999988765543
No 246
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.92 E-value=0.0012 Score=68.82 Aligned_cols=201 Identities=11% Similarity=0.143 Sum_probs=128.0
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccC----CCe--EEEEEeC---CCeEEEEECCCCCceeE
Q 008356 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRN----SRH--LLVTAGD---DGTLHLWDTTGRSPKVS 75 (568)
Q Consensus 5 dG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspd----g~~--lLaTgs~---DGtV~VWDl~t~~~~v~ 75 (568)
...+++...+++-|.+||+ +|+.+..+.. +.++.+..-+. ++. ++++... +++|.+|+++.....+.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~---g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT---GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC---SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC---CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 3456666677889999999 8998888763 44566666552 221 3344443 57899998853221244
Q ss_pred Eecc------CC-CCeEEEEE--cC-CCC-EEEEEeCCCeEEEEECC-------CCceeeEeecCCCeEEEEEecCCCEE
Q 008356 76 WLKQ------HS-APTAGISF--SS-DDK-IIASVGLDKKLYTYDPG-------SRRPSSCITYEAPFSSLAFIDDDWIL 137 (568)
Q Consensus 76 ~l~~------H~-~~Vtslaf--sP-dg~-~LaSgs~DGtV~IWDlr-------t~~~v~~~~h~~~ItsLafsPdg~~L 137 (568)
.+.. .. ..++.+|+ ++ .++ ++++...+|.+..|++. +.+.++.+.....+..|...+....|
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRL 194 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeE
Confidence 4421 11 56777888 77 444 67888889999999883 33567778888899999999999999
Q ss_pred EEEEcCCeEEEEECCCCC-CceEEEeec--CCC-CCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC-CCC
Q 008356 138 TAGTSNGRVVFYDIRGKP-QPLTVLRAC--SSS-EAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL-PSV 212 (568)
Q Consensus 138 asGs~DG~V~VWDlrt~~-~~v~~l~~~--~h~-~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr-~~~ 212 (568)
+++-++.-|..||.+-.. ...+.+... ++- ..+..|++.+.. ...+.+++++-.+..+.+||.. +..
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~--------~g~gyLivSsQG~~s~~Vydr~~~~~ 266 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAA--------DGKGYLMASSQGNSSYAIYDRQGKNK 266 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECG--------GGCEEEEEEEGGGTEEEEEESSTTCC
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecC--------CCCEEEEEEcCCCCEEEEEECCCCCc
Confidence 999999777777755221 111222222 222 357777774320 1122345555568899999986 444
Q ss_pred ccccc
Q 008356 213 TTSSV 217 (568)
Q Consensus 213 ~~~s~ 217 (568)
...++
T Consensus 267 ~vg~f 271 (355)
T 3amr_A 267 YVADF 271 (355)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44444
No 247
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.91 E-value=0.001 Score=66.95 Aligned_cols=188 Identities=13% Similarity=0.119 Sum_probs=111.3
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCceeEEeeC----CCCCcEEEEEEcc-CCCeEEEEEeC-----------------CC
Q 008356 3 NCKDEHLASISLSGDLILHNLASGAKAAELKD----PNEQVLRVLDYSR-NSRHLLVTAGD-----------------DG 60 (568)
Q Consensus 3 SpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~----~h~~~Vs~Lafsp-dg~~lLaTgs~-----------------DG 60 (568)
.+++..|+++...+.|.++|..+++. ..+.. ........+++.+ +|. ++++-.. ++
T Consensus 88 ~~~~g~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g 165 (322)
T 2fp8_A 88 NLQNNQLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTG 165 (322)
T ss_dssp ETTTTEEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCE
T ss_pred cCCCCcEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCc
Confidence 44334566665555688888765432 22221 1123467899999 886 5555322 36
Q ss_pred eEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEECCCCc--eeeEe-ecCCCeEEEEEecCCCE
Q 008356 61 TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASV-GLDKKLYTYDPGSRR--PSSCI-TYEAPFSSLAFIDDDWI 136 (568)
Q Consensus 61 tV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSg-s~DGtV~IWDlrt~~--~v~~~-~h~~~ItsLafsPdg~~ 136 (568)
.|..||..++. +..+.......+.++|++++++|+.+ ...+.|.+||+.... ....+ ...+ ...+++.++|++
T Consensus 166 ~v~~~d~~~~~--~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l 242 (322)
T 2fp8_A 166 RLIKYDPSTKE--TTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHF 242 (322)
T ss_dssp EEEEEETTTTE--EEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCE
T ss_pred eEEEEeCCCCE--EEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCE
Confidence 78888876654 22222222446789999999866655 566899999987532 11222 2233 788999999987
Q ss_pred EEEEEc----------CCeEEEEECCCCCCceEEEeecCC--CCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEE
Q 008356 137 LTAGTS----------NGRVVFYDIRGKPQPLTVLRACSS--SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSIL 204 (568)
Q Consensus 137 LasGs~----------DG~V~VWDlrt~~~~v~~l~~~~h--~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~ 204 (568)
.++... .+.|.++|... +.+..+..... ...++++++. ++.++++....+.|.
T Consensus 243 ~va~~~~~~~~~~~~~~~~v~~~d~~G--~~~~~~~~~~g~~~~~~~~~~~~-------------~g~L~v~~~~~~~i~ 307 (322)
T 2fp8_A 243 WVSSSEELDGNMHGRVDPKGIKFDEFG--NILEVIPLPPPFAGEHFEQIQEH-------------DGLLYIGTLFHGSVG 307 (322)
T ss_dssp EEEEEEETTSSTTSCEEEEEEEECTTS--CEEEEEECCTTTTTSCCCEEEEE-------------TTEEEEECSSCSEEE
T ss_pred EEEecCcccccccCCCccEEEEECCCC--CEEEEEECCCCCccccceEEEEe-------------CCEEEEeecCCCceE
Confidence 666544 46788888753 23344432110 1335555542 345666666678888
Q ss_pred cCCCCC
Q 008356 205 MPDPLP 210 (568)
Q Consensus 205 VWDlr~ 210 (568)
++++..
T Consensus 308 ~~~~~~ 313 (322)
T 2fp8_A 308 ILVYDK 313 (322)
T ss_dssp EEEC--
T ss_pred EEeccc
Confidence 888653
No 248
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.91 E-value=0.00052 Score=78.35 Aligned_cols=148 Identities=8% Similarity=-0.006 Sum_probs=91.5
Q ss_pred Ccc-CCCCEEEEEEC-CC----cEEEEECCCC-ceeE-EeeCCCCCcEEEEEEccCCCeEEEEEeCC----CeEEEEECC
Q 008356 1 MYN-CKDEHLASISL-SG----DLILHNLASG-AKAA-ELKDPNEQVLRVLDYSRNSRHLLVTAGDD----GTLHLWDTT 68 (568)
Q Consensus 1 afS-pdG~~LasGs~-DG----~V~VWDl~tg-~~v~-~l~~~h~~~Vs~Lafspdg~~lLaTgs~D----GtV~VWDl~ 68 (568)
+|+ |||++||.+.. +| .|+++|+.++ +.+. .+. .....+.|+|+++.++++..++ ..|+++++.
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~----~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lg 255 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS----GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMG 255 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE----EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETT
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc----CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECC
Confidence 378 99999886543 33 4999999988 6321 111 1233578999998666665432 368888887
Q ss_pred CCCce-eEEec-cCCCCeEEEEEcCCCCEEEEEeC---CCeEEEEECCCCc--e--eeEee-cCCCeEEEEEecCCCEEE
Q 008356 69 GRSPK-VSWLK-QHSAPTAGISFSSDDKIIASVGL---DKKLYTYDPGSRR--P--SSCIT-YEAPFSSLAFIDDDWILT 138 (568)
Q Consensus 69 t~~~~-v~~l~-~H~~~VtslafsPdg~~LaSgs~---DGtV~IWDlrt~~--~--v~~~~-h~~~ItsLafsPdg~~La 138 (568)
+.... ...+. .+......+.|+||+++|+.... ...|+++|+.++. . ..... .......+.|+. |..|+
T Consensus 256 t~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~ 334 (751)
T 2xe4_A 256 KLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLV 334 (751)
T ss_dssp SCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTEEE
T ss_pred CCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCEEE
Confidence 65422 22222 33345678899999998887653 3478999998752 2 22222 334555566554 55554
Q ss_pred EEE-cC----CeEEEEECCC
Q 008356 139 AGT-SN----GRVVFYDIRG 153 (568)
Q Consensus 139 sGs-~D----G~V~VWDlrt 153 (568)
..+ .+ ..|.++|+.+
T Consensus 335 ~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 335 ILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EEECTTTCTTCEEEEEETTS
T ss_pred EEeCCCCCCCcEEEEEcCCC
Confidence 443 33 3677788764
No 249
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.90 E-value=0.00084 Score=67.45 Aligned_cols=174 Identities=13% Similarity=0.054 Sum_probs=108.6
Q ss_pred ceeEEeeCCCCCcEEEEEEccCCCeEEEEEeC--CCeEEEEECCCCCceeEEec-cCCCCeEEEEEcCCCCEEEEEeCCC
Q 008356 27 AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD--DGTLHLWDTTGRSPKVSWLK-QHSAPTAGISFSSDDKIIASVGLDK 103 (568)
Q Consensus 27 ~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~--DGtV~VWDl~t~~~~v~~l~-~H~~~VtslafsPdg~~LaSgs~DG 103 (568)
+.+.++..........+.|++++. ++++.+. ++.|+++|+.+++. +..+. ........+++. .++..++.-.++
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~dg~-Lyvstg~~~~s~v~~iD~~tg~v-~~~i~l~~~~fgeGi~~~-g~~lyv~t~~~~ 86 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAENDT-LFESTGLYGRSSVRQVALQTGKV-ENIHKMDDSYFGEGLTLL-NEKLYQVVWLKN 86 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECSTTE-EEEEECSTTTCEEEEEETTTCCE-EEEEECCTTCCEEEEEEE-TTEEEEEETTCS
T ss_pred eEEEEEECCCCCCcccEEEeCCCe-EEEECCCCCCCEEEEEECCCCCE-EEEEecCCCcceEEEEEe-CCEEEEEEecCC
Confidence 345666532223468899999863 5665553 67999999998874 33332 222223345555 233444555788
Q ss_pred eEEEEECCCCceeeEeecC-CCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCC---CeeEEEEccCC
Q 008356 104 KLYTYDPGSRRPSSCITYE-APFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSE---AVSSLCWQRAK 179 (568)
Q Consensus 104 tV~IWDlrt~~~v~~~~h~-~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~---~VtsLafspdg 179 (568)
.|.++|..+.+.+..+... .. ...+.+||+.|+++..++.|.++|..+.+ ....+..-.+.. .++.+.|. +|
T Consensus 87 ~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~-v~~~I~Vg~~~~p~~~~nele~~-dg 162 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFK-LIKKHNVKYNGHRVIRLNELEYI-NG 162 (266)
T ss_dssp EEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEE-TT
T ss_pred EEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCc-EEEEEEECCCCcccccceeEEEE-CC
Confidence 9999999999998888654 32 24456678878777788999999998874 333333111111 24566665 33
Q ss_pred CeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCccccccc
Q 008356 180 PVFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSSVSL 219 (568)
Q Consensus 180 ~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~~s~~~ 219 (568)
.+++....++.|.+.|+........+..
T Consensus 163 ------------~lyvn~~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 163 ------------EVWANIWQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp ------------EEEEEETTSSEEEEEETTTCCEEEEEEC
T ss_pred ------------EEEEecCCCCeEEEEECCCCcEEEEEEC
Confidence 3344444567888888877665555443
No 250
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.89 E-value=0.00074 Score=67.84 Aligned_cols=172 Identities=12% Similarity=0.099 Sum_probs=109.8
Q ss_pred eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q 008356 28 KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYT 107 (568)
Q Consensus 28 ~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~I 107 (568)
.+.++..........|.|+. +.++++.+.+|.|+++|+.+++.....+. ....-..+++. .+++.+..-.++.+.+
T Consensus 45 Vv~~~phd~~~ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~-~~~FgeGit~~-g~~Ly~ltw~~~~v~V 120 (268)
T 3nok_A 45 IIREYPHATNAFTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWMERL-GNIFAEGLASD-GERLYQLTWTEGLLFT 120 (268)
T ss_dssp EEEEEECCTTCCEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEEEC-TTCCEEEEEEC-SSCEEEEESSSCEEEE
T ss_pred EEEEEcCCCccccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEECC-CCcceeEEEEe-CCEEEEEEccCCEEEE
Confidence 44555432345567888873 45888889999999999998885433322 11112335554 3345555567899999
Q ss_pred EECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCC---CeeEEEEccCCCeEEE
Q 008356 108 YDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSE---AVSSLCWQRAKPVFID 184 (568)
Q Consensus 108 WDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~---~VtsLafspdg~~Las 184 (568)
||..+.+.+..+.....-..++ ++++.|+....++.|.++|..+.+ ....+....+.. .++.+.|. +|
T Consensus 121 ~D~~Tl~~~~ti~~~~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~-v~~~I~V~~~g~~v~~lNeLe~~-dG----- 191 (268)
T 3nok_A 121 WSGMPPQRERTTRYSGEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFA-LVGAVQVKLRGQPVELINELECA-NG----- 191 (268)
T ss_dssp EETTTTEEEEEEECSSCCCCEE--EETTEEEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEE-TT-----
T ss_pred EECCcCcEEEEEeCCCceeEEe--cCCCEEEEECCCCEEEEEcCCCCe-EEEEEEeCCCCcccccccccEEe-CC-----
Confidence 9999999999987655444454 567888888889999999999874 334333222222 23556655 33
Q ss_pred eccCCCCeEEEEecCCCcEEcCCCCCCCccccccc
Q 008356 185 ETTCKAETALLGGAVGDSILMPDPLPSVTTSSVSL 219 (568)
Q Consensus 185 ~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~~s~~~ 219 (568)
.+++..-.++.|.+.|+........+..
T Consensus 192 -------~lyanvw~s~~I~vIDp~TG~V~~~Idl 219 (268)
T 3nok_A 192 -------VIYANIWHSSDVLEIDPATGTVVGVIDA 219 (268)
T ss_dssp -------EEEEEETTCSEEEEECTTTCBEEEEEEC
T ss_pred -------EEEEEECCCCeEEEEeCCCCcEEEEEEC
Confidence 3334444466777777776665554443
No 251
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.88 E-value=0.012 Score=59.45 Aligned_cols=173 Identities=12% Similarity=-0.031 Sum_probs=104.5
Q ss_pred ccCCCCEEEEEEC-CCcEEEEECCC---CceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 008356 2 YNCKDEHLASISL-SGDLILHNLAS---GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (568)
Q Consensus 2 fSpdG~~LasGs~-DG~V~VWDl~t---g~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l 77 (568)
|+++++.|+.... ++.|+.+++.. +.....+....-.....+++.+.+++++++-..++.|.++|+++... ...+
T Consensus 37 ~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~-~~~~ 115 (316)
T 1ijq_A 37 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLF 115 (316)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEE
T ss_pred EEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCce-EEEE
Confidence 5666666665554 57888888765 12222222112233467888876665777767789999999986552 2223
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeC-C-CeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCC
Q 008356 78 KQHSAPTAGISFSSDDKIIASVGL-D-KKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRG 153 (568)
Q Consensus 78 ~~H~~~VtslafsPdg~~LaSgs~-D-GtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs-~DG~V~VWDlrt 153 (568)
.........+++.|.+..|+.+.. . +.|..+++......... ..-.....+++++++..|+.+. ..+.|..+|++.
T Consensus 116 ~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 116 RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 334456899999996665555543 3 68999988644332222 2345678999999877766655 567899999986
Q ss_pred CCCceEEEeecCCCCCeeEEEEc
Q 008356 154 KPQPLTVLRACSSSEAVSSLCWQ 176 (568)
Q Consensus 154 ~~~~v~~l~~~~h~~~VtsLafs 176 (568)
.. ...+............+++.
T Consensus 196 ~~-~~~~~~~~~~~~~P~giav~ 217 (316)
T 1ijq_A 196 GN-RKTILEDEKRLAHPFSLAVF 217 (316)
T ss_dssp CS-CEEEEECTTTTSSEEEEEEE
T ss_pred Cc-eEEEeecCCccCCcEEEEEE
Confidence 43 22222211122345666664
No 252
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.87 E-value=0.0039 Score=62.15 Aligned_cols=181 Identities=11% Similarity=0.145 Sum_probs=114.9
Q ss_pred CccCCCCEEE-EEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc--eeEEe
Q 008356 1 MYNCKDEHLA-SISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP--KVSWL 77 (568)
Q Consensus 1 afSpdG~~La-sGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~--~v~~l 77 (568)
+|+|+++.|+ +...++.|...|+. ++.+..+.-....-...|++.+++. ++++.-.++.+.++++..... .+...
T Consensus 33 a~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~-~~vs~E~~~~l~~~~v~~~~~i~~~~~~ 110 (255)
T 3qqz_A 33 TWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ-FVISDERDYAIYVISLTPNSEVKILKKI 110 (255)
T ss_dssp EEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE-EEEEETTTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE-EEEEECCCCcEEEEEcCCCCeeeeeeee
Confidence 4678776555 56778899999987 8888777532234567788888775 556655678899999865442 11111
Q ss_pred c------cCCCCeEEEEEcCCCCEEEEEeCCC--eEEEEEC-CCCceeeEee--------cCCCeEEEEEecC-CCEEEE
Q 008356 78 K------QHSAPTAGISFSSDDKIIASVGLDK--KLYTYDP-GSRRPSSCIT--------YEAPFSSLAFIDD-DWILTA 139 (568)
Q Consensus 78 ~------~H~~~VtslafsPdg~~LaSgs~DG--tV~IWDl-rt~~~v~~~~--------h~~~ItsLafsPd-g~~Las 139 (568)
. ........++|+|.++.|+++.+.. .|+.|+- .....+.... ....+..++++|. +++++.
T Consensus 111 ~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliL 190 (255)
T 3qqz_A 111 KIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVL 190 (255)
T ss_dssp ECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEE
T ss_pred ccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEE
Confidence 1 2344568999999887776666544 4555551 1111222221 2345789999996 556666
Q ss_pred EEcCCeEEEEECCCCCCceEEEeecC-C------CCCeeEEEEccCCCeEEEe
Q 008356 140 GTSNGRVVFYDIRGKPQPLTVLRACS-S------SEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 140 Gs~DG~V~VWDlrt~~~~v~~l~~~~-h------~~~VtsLafspdg~~Las~ 185 (568)
....+.|.++|.+.. ++..+.... . -...-.|+|.++|...+++
T Consensus 191 S~~s~~L~~~d~~g~--~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 191 SHESRALQEVTLVGE--VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp ETTTTEEEEECTTCC--EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred ECCCCeEEEEcCCCC--EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 667888999998765 445444321 1 1256789999987654443
No 253
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.86 E-value=0.00071 Score=74.90 Aligned_cols=140 Identities=11% Similarity=0.057 Sum_probs=94.8
Q ss_pred cEEEEECCCCceeEEeeCCCC---------CcEEEEEEccCCC--eEEEEEeCCCeEEEEECCCCCceeEEeccC-----
Q 008356 17 DLILHNLASGAKAAELKDPNE---------QVLRVLDYSRNSR--HLLVTAGDDGTLHLWDTTGRSPKVSWLKQH----- 80 (568)
Q Consensus 17 ~V~VWDl~tg~~v~~l~~~h~---------~~Vs~Lafspdg~--~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H----- 80 (568)
.|..+|..+|+.+..++..+. ..+. +....+|+ .+++.++.+|.++++|..+++.....-...
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 599999999999887764221 2221 22234563 367888999999999998887432221111
Q ss_pred -------CCCe--------------------------EEEEEcCCCCEEEEEe---------------------------
Q 008356 81 -------SAPT--------------------------AGISFSSDDKIIASVG--------------------------- 100 (568)
Q Consensus 81 -------~~~V--------------------------tslafsPdg~~LaSgs--------------------------- 100 (568)
..++ ..++++|+..+++...
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 0111 2357788767666553
Q ss_pred ----------CCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCc
Q 008356 101 ----------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (568)
Q Consensus 101 ----------~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~ 157 (568)
.++.|..||+.+++.+..+.....+....+...+..+++++.||.|++||.++++..
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 357899999999998887765555544444445678888999999999999998543
No 254
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.85 E-value=0.0042 Score=64.97 Aligned_cols=184 Identities=10% Similarity=-0.050 Sum_probs=118.4
Q ss_pred EEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEE
Q 008356 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGI 87 (568)
Q Consensus 8 ~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~Vtsl 87 (568)
+|+.+ ....|+.+++........+. .......++|.+.+..++++-...+.|+.+++++... ...+.........+
T Consensus 89 ~l~~~-~~~~I~~i~~~~~~~~~~~~--~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~~~~~~~~~p~gl 164 (386)
T 3v65_B 89 VLLFA-NRIDIRQVLPHRSEYTLLLN--NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EEVVSTGLESPGGL 164 (386)
T ss_dssp EEEEE-CBSCEEEECTTSCCCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE-EEEECSSCSCCCCE
T ss_pred eeEee-cCccceeeccCCCcEEEEec--CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc-EEEEeCCCCCccEE
Confidence 34433 44578888886655444443 2334677999987765777766788999999987652 23333334456788
Q ss_pred EEcCC-CCEEEEEeCCCeEEEEECCCCceeeEee-cCCCeEEEEEecCCCEEEEEE-cC-CeEEEEECCCCCCceEEEee
Q 008356 88 SFSSD-DKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT-SN-GRVVFYDIRGKPQPLTVLRA 163 (568)
Q Consensus 88 afsPd-g~~LaSgs~DGtV~IWDlrt~~~v~~~~-h~~~ItsLafsPdg~~LasGs-~D-G~V~VWDlrt~~~~v~~l~~ 163 (568)
++.+. ++++++-...+.|.++++........+. .......++++|.+..|+... .+ +.|..++++.... ..+..
T Consensus 165 avd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~- 242 (386)
T 3v65_B 165 AVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIAD- 242 (386)
T ss_dssp EEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEEC-
T ss_pred EEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc-EEEEE-
Confidence 99984 4455555667889999987654433332 335689999999766666554 34 7899999887532 22222
Q ss_pred cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 164 CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 164 ~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
........|+|++++. .++++-...+.|..+|+.
T Consensus 243 -~~~~~PnGlavd~~~~-----------~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 243 -THLFWPNGLTIDYAGR-----------RMYWVDAKHHVIERANLD 276 (386)
T ss_dssp -SSCSCEEEEEEEGGGT-----------EEEEEETTTTEEEEECTT
T ss_pred -CCCCCeeeEEEeCCCC-----------EEEEEECCCCEEEEEeCC
Confidence 2334578899998643 344445556777777764
No 255
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.84 E-value=0.00034 Score=78.91 Aligned_cols=155 Identities=14% Similarity=0.200 Sum_probs=104.3
Q ss_pred ccCCCCEEEEEECCC-------------------cEEEEECCCCceeEEeeCC-CC-------CcEEEEEEccCCC--eE
Q 008356 2 YNCKDEHLASISLSG-------------------DLILHNLASGAKAAELKDP-NE-------QVLRVLDYSRNSR--HL 52 (568)
Q Consensus 2 fSpdG~~LasGs~DG-------------------~V~VWDl~tg~~v~~l~~~-h~-------~~Vs~Lafspdg~--~l 52 (568)
|.+++++++.+..++ .|..+|..+|+.+..++.. |. .......+..+++ .+
T Consensus 237 ~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~ 316 (668)
T 1kv9_A 237 YDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKV 316 (668)
T ss_dssp EETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEE
T ss_pred EcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEE
Confidence 445677888887665 3999999999998887753 21 1222223333453 36
Q ss_pred EEEEeCCCeEEEEECCCCCceeEEeccC-----------CCC------------------------eEEEEEcCCCCEEE
Q 008356 53 LVTAGDDGTLHLWDTTGRSPKVSWLKQH-----------SAP------------------------TAGISFSSDDKIIA 97 (568)
Q Consensus 53 LaTgs~DGtV~VWDl~t~~~~v~~l~~H-----------~~~------------------------VtslafsPdg~~La 97 (568)
++.++.+|.++++|..+++.+...-... ..+ -..++++|+..+++
T Consensus 317 v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~y 396 (668)
T 1kv9_A 317 LMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVY 396 (668)
T ss_dssp EEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEE
T ss_pred EEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEE
Confidence 8889999999999998887431110000 000 01256777666555
Q ss_pred EE------------------------------------eCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEE
Q 008356 98 SV------------------------------------GLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGT 141 (568)
Q Consensus 98 Sg------------------------------------s~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs 141 (568)
.. ..+|.|+.||+.+++.+..+..........+...+.++++++
T Consensus 397 v~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~ 476 (668)
T 1kv9_A 397 IPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGT 476 (668)
T ss_dssp EEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEEC
T ss_pred EeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEEC
Confidence 42 134789999999999988776555555455556788999999
Q ss_pred cCCeEEEEECCCCCC
Q 008356 142 SNGRVVFYDIRGKPQ 156 (568)
Q Consensus 142 ~DG~V~VWDlrt~~~ 156 (568)
.|+.|++||.++++.
T Consensus 477 ~dg~l~a~d~~tG~~ 491 (668)
T 1kv9_A 477 AAGQMHAYSADKGEA 491 (668)
T ss_dssp TTSEEEEEETTTCCE
T ss_pred CcccchhhhhhcChh
Confidence 999999999998853
No 256
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.83 E-value=0.0012 Score=66.16 Aligned_cols=177 Identities=11% Similarity=0.073 Sum_probs=103.0
Q ss_pred ccCCCCEEEEEECC--CcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe--
Q 008356 2 YNCKDEHLASISLS--GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL-- 77 (568)
Q Consensus 2 fSpdG~~LasGs~D--G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l-- 77 (568)
+.++|+++++.... ..|..+|..+++...............++..+.+ .++++-..++.|+++|.......+...
T Consensus 79 ~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~ 157 (306)
T 2p4o_A 79 FTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHP 157 (306)
T ss_dssp ECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECG
T ss_pred EcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEECC
Confidence 56788865544332 2477778777775433332222334455555544 345554468999999986542112111
Q ss_pred -------ccCCCCeEEEEEcCCCCEEEEE-eCCCeEEEEECCC-Cce--eeEeecCCCeEEEEEecCCCEEEEEEcCCeE
Q 008356 78 -------KQHSAPTAGISFSSDDKIIASV-GLDKKLYTYDPGS-RRP--SSCITYEAPFSSLAFIDDDWILTAGTSNGRV 146 (568)
Q Consensus 78 -------~~H~~~VtslafsPdg~~LaSg-s~DGtV~IWDlrt-~~~--v~~~~h~~~ItsLafsPdg~~LasGs~DG~V 146 (568)
.......+.+ ++++++|+.+ ...+.|..||+.. ++. ...+........++++++|+++++....+.|
T Consensus 158 ~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~V 235 (306)
T 2p4o_A 158 MLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNSV 235 (306)
T ss_dssp GGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCCE
T ss_pred ccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCeE
Confidence 1112245666 7777766554 4677999999875 322 2222222456778999999887777778899
Q ss_pred EEEECCCCCCceEEEeecCCCCCeeEEEEc---cCCCeEE
Q 008356 147 VFYDIRGKPQPLTVLRACSSSEAVSSLCWQ---RAKPVFI 183 (568)
Q Consensus 147 ~VWDlrt~~~~v~~l~~~~h~~~VtsLafs---pdg~~La 183 (568)
.++|.... ..............++++|. ++++.|.
T Consensus 236 ~~~~~~G~--~~~~~~~~~~~~~p~~~a~~g~~~d~~~Ly 273 (306)
T 2p4o_A 236 VRIAPDRS--TTIIAQAEQGVIGSTAVAFGQTEGDCTAIY 273 (306)
T ss_dssp EEECTTCC--EEEEECGGGTCTTEEEEEECCSTTTTTEEE
T ss_pred EEECCCCC--EEEEeecccccCCceEEEEecccCCCCEEE
Confidence 99998632 21121111223568899998 6655443
No 257
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.79 E-value=0.0067 Score=60.70 Aligned_cols=176 Identities=8% Similarity=0.029 Sum_probs=101.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeC-CC-eEEEEECCCCCceeEEec
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD-DG-TLHLWDTTGRSPKVSWLK 78 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~-DG-tV~VWDl~t~~~~v~~l~ 78 (568)
+|+++|+++++-..++.|+.||... +....+. .......+++.++++ ++++... ++ .|..+|..+++.....-.
T Consensus 38 a~~~~g~lyv~d~~~~~I~~~d~~g-~~~~~~~--~~~~p~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~~~~~~~ 113 (306)
T 2p4o_A 38 ASAPDGTIFVTNHEVGEIVSITPDG-NQQIHAT--VEGKVSGLAFTSNGD-LVATGWNADSIPVVSLVKSDGTVETLLTL 113 (306)
T ss_dssp EECTTSCEEEEETTTTEEEEECTTC-CEEEEEE--CSSEEEEEEECTTSC-EEEEEECTTSCEEEEEECTTSCEEEEEEC
T ss_pred EECCCCCEEEEeCCCCeEEEECCCC-ceEEEEe--CCCCceeEEEcCCCc-EEEEeccCCcceEEEEcCCCCeEEEEEeC
Confidence 3678888666555788999999754 4444443 234678899999997 5555443 22 477777666652211111
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCce-eeEe----------ecCCCeEEEEEecCCCEEEEEE-cCCeE
Q 008356 79 QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP-SSCI----------TYEAPFSSLAFIDDDWILTAGT-SNGRV 146 (568)
Q Consensus 79 ~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~-v~~~----------~h~~~ItsLafsPdg~~LasGs-~DG~V 146 (568)
........++..+++..+++-..++.|+++|...++. +... ..-...+.+ ++++++|+++. ..+.|
T Consensus 114 ~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I 191 (306)
T 2p4o_A 114 PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLL 191 (306)
T ss_dssp TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEE
T ss_pred CCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEE
Confidence 2233345666555555455544688999999876531 1110 011234455 78887766655 57889
Q ss_pred EEEECCCCCC--ceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 008356 147 VFYDIRGKPQ--PLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 147 ~VWDlrt~~~--~v~~l~~~~h~~~VtsLafspdg~~Las~ 185 (568)
.+||+..... ....+.. ......++++++|+++++.
T Consensus 192 ~~~~~~~~g~~~~~~~~~~---~~~P~gi~vd~dG~l~va~ 229 (306)
T 2p4o_A 192 LRIPVDSTDKPGEPEIFVE---QTNIDDFAFDVEGNLYGAT 229 (306)
T ss_dssp EEEEBCTTSCBCCCEEEEE---SCCCSSEEEBTTCCEEEEC
T ss_pred EEEEeCCCCCCCccEEEec---cCCCCCeEECCCCCEEEEe
Confidence 9999875211 1122221 1335667888876554443
No 258
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.77 E-value=0.00069 Score=67.91 Aligned_cols=172 Identities=13% Similarity=0.151 Sum_probs=106.5
Q ss_pred eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCC--eEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEE-EEeCCCe
Q 008356 28 KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIA-SVGLDKK 104 (568)
Q Consensus 28 ~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DG--tV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~La-Sgs~DGt 104 (568)
.+.++..........|.|+ ++ .++++.+.+| .|+++|+.+++. +..+.- ..........++++.|+ ..-.++.
T Consensus 33 vv~~~phd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv-~~~~~l-~~~~FgeGit~~g~~ly~ltw~~~~ 108 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKT-LQQIEL-GKRYFGEGISDWKDKIVGLTWKNGL 108 (262)
T ss_dssp EEEEEECCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCE-EEEEEC-CTTCCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEecCCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcE-EEEEec-CCccceeEEEEeCCEEEEEEeeCCE
Confidence 4556653234556889998 55 4778888776 899999999884 333332 22333332333344444 4446889
Q ss_pred EEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCC---CCeeEEEEccCCCe
Q 008356 105 LYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSS---EAVSSLCWQRAKPV 181 (568)
Q Consensus 105 V~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~---~~VtsLafspdg~~ 181 (568)
+.+||..+.+.+..+.....-..++ ++++.|+....++.|.++|..+.+ ....+...... ..++.+.|. +|
T Consensus 109 v~v~D~~t~~~~~ti~~~~eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~-v~~~I~V~~~g~~~~~lNELe~~-~G-- 182 (262)
T 3nol_A 109 GFVWNIRNLRQVRSFNYDGEGWGLT--HNDQYLIMSDGTPVLRFLDPESLT-PVRTITVTAHGEELPELNELEWV-DG-- 182 (262)
T ss_dssp EEEEETTTCCEEEEEECSSCCCCEE--ECSSCEEECCSSSEEEEECTTTCS-EEEEEECEETTEECCCEEEEEEE-TT--
T ss_pred EEEEECccCcEEEEEECCCCceEEe--cCCCEEEEECCCCeEEEEcCCCCe-EEEEEEeccCCccccccceeEEE-CC--
Confidence 9999999999999987654333444 567777777778889999999874 33333321112 223446654 33
Q ss_pred EEEeccCCCCeEEEEecCCCcEEcCCCCCCCccccccc
Q 008356 182 FIDETTCKAETALLGGAVGDSILMPDPLPSVTTSSVSL 219 (568)
Q Consensus 182 Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~~s~~~ 219 (568)
.+++..-.++.|.+.|+........+..
T Consensus 183 ----------~lyan~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 183 ----------EIFANVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp ----------EEEEEETTSSEEEEECTTTCBEEEEEEC
T ss_pred ----------EEEEEEccCCeEEEEECCCCcEEEEEEC
Confidence 3334444467777777776665544433
No 259
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.76 E-value=0.00053 Score=68.08 Aligned_cols=176 Identities=13% Similarity=0.063 Sum_probs=108.6
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCe
Q 008356 5 KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPT 84 (568)
Q Consensus 5 dG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~V 84 (568)
+++ |.+++.++.|..+|.. ++.+..+.. ....+.++.+.+++. ++.++ +.|..|| .+++. ..........+
T Consensus 147 ~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~-~~~~~~~~~~d~~g~--l~v~t--~~l~~~d-~~g~~-~~~~~~~~~~~ 217 (330)
T 3hxj_A 147 DGT-IYVGSNDNYLYAINPD-GTEKWRFKT-NDAITSAASIGKDGT--IYFGS--DKVYAIN-PDGTE-KWNFYAGYWTV 217 (330)
T ss_dssp TSC-EEEECTTSEEEEECTT-SCEEEEEEC-SSCCCSCCEECTTCC--EEEES--SSEEEEC-TTSCE-EEEECCSSCCC
T ss_pred CCE-EEEEcCCCEEEEECCC-CCEeEEEec-CCCceeeeEEcCCCE--EEEEe--CEEEEEC-CCCcE-EEEEccCCcce
Confidence 444 6667788999999988 877766664 344566677777776 44445 8899999 55442 33344445668
Q ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecC-CCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEee
Q 008356 85 AGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYE-APFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRA 163 (568)
Q Consensus 85 tslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~-~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~ 163 (568)
.++...+++. |..++.++.|..+|. +++.+..+... ..+..+.+.+++ .|.+++.+|.|..+|.. .+ ....+.
T Consensus 218 ~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~~-g~-~~~~~~- 291 (330)
T 3hxj_A 218 TRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINPD-GT-EKWNFE- 291 (330)
T ss_dssp SCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECTT-SC-EEEEEE-
T ss_pred eceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECCC-Cc-EEEEEE-
Confidence 8888887765 555677888888884 55555555332 334455555555 56778888899999963 32 222232
Q ss_pred cCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 164 CSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 164 ~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
.....+.++....+|. ++.++.+|.+++....
T Consensus 292 -~~~~~~~~~~~d~~g~-------------l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 292 -TGSWIIATPVIDENGT-------------IYFGTRNGKFYALFNL 323 (330)
T ss_dssp -CSSCCCSCCEECTTCC-------------EEEECTTSCEEEEEC-
T ss_pred -cCCccccceEEcCCCE-------------EEEEcCCCeEEEEecc
Confidence 2234455555545433 2334447777776543
No 260
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.76 E-value=0.0016 Score=72.33 Aligned_cols=141 Identities=14% Similarity=0.175 Sum_probs=91.4
Q ss_pred CcEEEEECCCCceeEEeeCC-CC--------CcEEEEEEc-cCCC--eEEEEEeCCCeEEEEECCCCCceeEEeccC---
Q 008356 16 GDLILHNLASGAKAAELKDP-NE--------QVLRVLDYS-RNSR--HLLVTAGDDGTLHLWDTTGRSPKVSWLKQH--- 80 (568)
Q Consensus 16 G~V~VWDl~tg~~v~~l~~~-h~--------~~Vs~Lafs-pdg~--~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H--- 80 (568)
+.|..+|..+|+.+-.++.. |. ..+. +... .+|+ .+++.++.+|.|+++|..+++.+...-...
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 58999999999998887642 21 1221 2222 3564 378889999999999998877432211111
Q ss_pred ---------CCC--------------------------------eEEEEEcCCCCEEEEEe-------------------
Q 008356 81 ---------SAP--------------------------------TAGISFSSDDKIIASVG------------------- 100 (568)
Q Consensus 81 ---------~~~--------------------------------VtslafsPdg~~LaSgs------------------- 100 (568)
..+ -..++++|+..++++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~ 449 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSA 449 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSC
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCc
Confidence 000 01345666444444432
Q ss_pred --------------CCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCc
Q 008356 101 --------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP 157 (568)
Q Consensus 101 --------------~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~ 157 (568)
.+|.|..||+.+++.+.......++..-.+...+.++++|+.||.|+.||.++++..
T Consensus 450 ~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 450 YLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp CCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred eeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEE
Confidence 367899999999998877754444332222334678888999999999999998643
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.76 E-value=0.0074 Score=62.22 Aligned_cols=179 Identities=9% Similarity=-0.035 Sum_probs=114.2
Q ss_pred CCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcCC-
Q 008356 14 LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSD- 92 (568)
Q Consensus 14 ~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~VtslafsPd- 92 (568)
....|+..++........+.. ......++|++.+..++++-...+.|+.+++.+... ...+.........+++.+.
T Consensus 51 ~~~~I~~i~~~g~~~~~~~~~--~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~-~~~~~~~~~~p~glavd~~~ 127 (349)
T 3v64_C 51 NRIDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV-EEVVSTGLESPGGLAVDWVH 127 (349)
T ss_dssp CBSCEEEECTTSCCEEEEECS--CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCEEEEETTT
T ss_pred cccceEEEeCCCCeeEEeecC--CCceEEEEEeccccEEEEEeccCCceEEEecCCCCc-eEEEeCCCCCccEEEEecCC
Confidence 345688888765544433332 234677999987775667766788999999987652 2333333445678999984
Q ss_pred CCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEE-cC-CeEEEEECCCCCCceEEEeecCCCCC
Q 008356 93 DKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SN-GRVVFYDIRGKPQPLTVLRACSSSEA 169 (568)
Q Consensus 93 g~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs-~D-G~V~VWDlrt~~~~v~~l~~~~h~~~ 169 (568)
++++++-...+.|.+.++........+ ........++++|.+..|+... .+ +.|..++++.... ..+.. ..-..
T Consensus 128 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~--~~~~~-~~~~~ 204 (349)
T 3v64_C 128 DKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR--RIIAD-THLFW 204 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EESCC-SSCSC
T ss_pred CeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc--EEEEE-CCCCC
Confidence 455555566789999998765443333 2335678999999666555544 44 7899999887532 22211 22345
Q ss_pred eeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 170 VSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 170 VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
...|+|++++.. ++++-...+.|..+|+.
T Consensus 205 PnGla~d~~~~~-----------lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 205 PNGLTIDYAGRR-----------MYWVDAKHHVIERANLD 233 (349)
T ss_dssp EEEEEEETTTTE-----------EEEEETTTTEEEEEETT
T ss_pred cceEEEeCCCCE-----------EEEEECCCCEEEEEeCC
Confidence 788999986443 34444445666666653
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.75 E-value=0.018 Score=59.23 Aligned_cols=169 Identities=8% Similarity=-0.038 Sum_probs=105.7
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 2 fSpdG~~LasGs-~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
|++.++.|+... ..+.|+.+++........+.. .......+++.+.+.+++++-...+.|.+.++++... ...+...
T Consensus 80 ~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~-~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~ 157 (349)
T 3v64_C 80 FHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQS 157 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECTT
T ss_pred EeccccEEEEEeccCCceEEEecCCCCceEEEeC-CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce-EEEEeCC
Confidence 455555555554 456777777765443333322 2233456888877666777777788999999987653 2333344
Q ss_pred CCCeEEEEEcCCCCEEE-EEeCC-CeEEEEECCCCceeeEee-cCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCCCCC
Q 008356 81 SAPTAGISFSSDDKIIA-SVGLD-KKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQ 156 (568)
Q Consensus 81 ~~~VtslafsPdg~~La-Sgs~D-GtV~IWDlrt~~~v~~~~-h~~~ItsLafsPdg~~LasGs-~DG~V~VWDlrt~~~ 156 (568)
....+.++++|.+..|+ +-... +.|..+++........+. .-.....+++++++..|+.+. ..+.|..+|++....
T Consensus 158 l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~ 237 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR 237 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce
Confidence 56689999999555544 44444 789999987544333332 344578999998776666654 567899999986532
Q ss_pred ceEEEeecCCCCCeeEEEE
Q 008356 157 PLTVLRACSSSEAVSSLCW 175 (568)
Q Consensus 157 ~v~~l~~~~h~~~VtsLaf 175 (568)
..++. ........+++
T Consensus 238 -~~~~~--~~~~~P~giav 253 (349)
T 3v64_C 238 -KAVIS--QGLPHPFAITV 253 (349)
T ss_dssp -EEEEC--SSCSSEEEEEE
T ss_pred -EEEEe--CCCCCceEEEE
Confidence 22232 22344566666
No 263
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.75 E-value=0.0033 Score=64.22 Aligned_cols=185 Identities=8% Similarity=-0.012 Sum_probs=116.9
Q ss_pred EEEEEECCCcEEEEECCCCc--eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeE
Q 008356 8 HLASISLSGDLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTA 85 (568)
Q Consensus 8 ~LasGs~DG~V~VWDl~tg~--~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~Vt 85 (568)
+|+.+ ....|+.+++.... ....+. .......++|.+.+..++++-..++.|+.+++.+.......+........
T Consensus 6 ~ll~~-~~~~I~~i~l~~~~~~~~~~~~--~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~ 82 (318)
T 3sov_A 6 LLLYA-NRRDLRLVDATNGKENATIVVG--GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD 82 (318)
T ss_dssp EEEEE-CEEEEEEEETTCTTSCCEEEEE--EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC
T ss_pred EEEEE-ccCeEEEEECCCCceEEEEEec--CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc
Confidence 34433 35679999987653 112222 11235578999876657777777889999999776422222333334577
Q ss_pred EEEEcC-CCCEEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEE--cCCeEEEEECCCCCCceEEE
Q 008356 86 GISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT--SNGRVVFYDIRGKPQPLTVL 161 (568)
Q Consensus 86 slafsP-dg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs--~DG~V~VWDlrt~~~~v~~l 161 (568)
.+++.+ .++++++-...+.|.++++........+ ........++++|.+..|+... ..+.|..++++.... ..++
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~ 161 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIII 161 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEE
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEE
Confidence 899997 4555555567789999998765443333 3445688999999766666665 357899999886532 2222
Q ss_pred eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 162 RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 162 ~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
. ..-.....|+|++++.. ++++-...+.|..+|+.
T Consensus 162 ~--~~l~~Pnglavd~~~~~-----------lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 162 N--SEIYWPNGLTLDYEEQK-----------LYWADAKLNFIHKSNLD 196 (318)
T ss_dssp C--SSCSCEEEEEEETTTTE-----------EEEEETTTTEEEEEETT
T ss_pred E--CCCCCccEEEEeccCCE-----------EEEEECCCCEEEEEcCC
Confidence 2 22345788999986443 34444456667776654
No 264
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.70 E-value=0.015 Score=61.06 Aligned_cols=185 Identities=7% Similarity=-0.055 Sum_probs=119.6
Q ss_pred EEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC---ceeEEeccCCCCe
Q 008356 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS---PKVSWLKQHSAPT 84 (568)
Q Consensus 8 ~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~---~~v~~l~~H~~~V 84 (568)
+|+.. ....|+..++........+. ....+..|+|++.+..++++-..++.|+.+++.+.. .....+.......
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~~~~--~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEEEEC--SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred eeEEe-ccceeEEEccCCcceeEecc--ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 44444 35688999987665444443 334567899998777566766678899999987621 1233344455678
Q ss_pred EEEEEcC-CCCEEEEEeCCCeEEEEECCCCceeeEee-cCCCeEEEEEecCCCEEEEEEc--CCeEEEEECCCCCCceEE
Q 008356 85 AGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTS--NGRVVFYDIRGKPQPLTV 160 (568)
Q Consensus 85 tslafsP-dg~~LaSgs~DGtV~IWDlrt~~~v~~~~-h~~~ItsLafsPdg~~LasGs~--DG~V~VWDlrt~~~~v~~ 160 (568)
..+++.+ .++++++-...+.|.+.|+........+. .......|+++|.+.+|+.... .+.|...+++.... ..+
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~-~~~ 240 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSL 240 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC-EEE
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc-EEE
Confidence 8999998 55555565677899999998765544443 4456899999997666666553 47899999987532 222
Q ss_pred EeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 161 LRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 161 l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
+. ..-.....|++++++.. ++++-.....|..+|+.
T Consensus 241 ~~--~~l~~P~glavd~~~~~-----------lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 241 VT--ENIQWPNGITLDLLSGR-----------LYWVDSKLHSISSIDVN 276 (400)
T ss_dssp EC--SSCSCEEEEEEETTTTE-----------EEEEETTTTEEEEEETT
T ss_pred EE--CCCCceEEEEEEeCCCE-----------EEEEECCCCEEEEEeCC
Confidence 22 23356789999986444 34444445667766653
No 265
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.63 E-value=0.003 Score=62.62 Aligned_cols=171 Identities=18% Similarity=0.203 Sum_probs=107.3
Q ss_pred eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCC--eEEEEECCCCCceeEEeccCCCCe--EEEEEcCCCCEEEEEeCCC
Q 008356 28 KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVSWLKQHSAPT--AGISFSSDDKIIASVGLDK 103 (568)
Q Consensus 28 ~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DG--tV~VWDl~t~~~~v~~l~~H~~~V--tslafsPdg~~LaSgs~DG 103 (568)
.+.++.......+..+.|+. + .++.+.+.+| .|+++|+.+++. +..+.-. ... -.+++. .++..+..-.++
T Consensus 11 v~~~~phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv-~~~~~l~-~~~fgeGi~~~-~~~ly~ltw~~~ 85 (243)
T 3mbr_X 11 VVKRYPHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRI-LQRAEVP-PPYFGAGIVAW-RDRLIQLTWRNH 85 (243)
T ss_dssp EEEEEECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCE-EEEEECC-TTCCEEEEEEE-TTEEEEEESSSS
T ss_pred EEEEcCCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCE-EEEEeCC-CCcceeEEEEe-CCEEEEEEeeCC
Confidence 45566422345678899986 3 4777777765 899999999874 3333222 222 233443 344445556788
Q ss_pred eEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCC---CeeEEEEccCCC
Q 008356 104 KLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSE---AVSSLCWQRAKP 180 (568)
Q Consensus 104 tV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~---~VtsLafspdg~ 180 (568)
.+.+||..+.+.+..+.....-..++ +++..|++...++.|.++|..+.+ ....+....+.. .++.+.|. +
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~-~~~~I~V~~~g~~~~~lNeLe~~-~-- 159 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPGEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQ-QVGSIKVTAGGRPLDNLNELEWV-N-- 159 (243)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCEEE--ECSSCEEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEE-T--
T ss_pred EEEEEECCcCcEEEEEeCCCCceEEe--eCCCEEEEECCCCeEEEEeCCCCe-EEEEEEEccCCcccccceeeEEe-C--
Confidence 99999999999999987655444554 567777777778999999999874 334443212222 33455554 2
Q ss_pred eEEEeccCCCCeEEEEecCCCcEEcCCCCCCCccccccc
Q 008356 181 VFIDETTCKAETALLGGAVGDSILMPDPLPSVTTSSVSL 219 (568)
Q Consensus 181 ~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~~~s~~~ 219 (568)
+.+++..-.+..|.+.|++.......+..
T Consensus 160 ----------G~lyanvw~s~~I~vIDp~tG~V~~~idl 188 (243)
T 3mbr_X 160 ----------GELLANVWLTSRIARIDPASGKVVAWIDL 188 (243)
T ss_dssp ----------TEEEEEETTTTEEEEECTTTCBEEEEEEC
T ss_pred ----------CEEEEEECCCCeEEEEECCCCCEEEEEEC
Confidence 23344444466777777777665555544
No 266
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.62 E-value=0.016 Score=60.47 Aligned_cols=188 Identities=9% Similarity=-0.031 Sum_probs=114.7
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 2 fSpdG~~LasGs-~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
|.+.++.|+... ..+.|+.+++........+.. .......+++.+.+.+++++-...+.|.+.++++... ...+...
T Consensus 123 ~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~-~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~-~~l~~~~ 200 (386)
T 3v65_B 123 FHHRRELVFWSDVTLDRILRANLNGSNVEEVVST-GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR-KVLLWQS 200 (386)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCCEEEEECS-SCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC-EEEECSS
T ss_pred EecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeC-CCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce-EEeecCC
Confidence 455555555554 456788888765543333332 2223356788877666777777788999999876652 3333444
Q ss_pred CCCeEEEEEcCCCCEEEEEe-CC-CeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCCCCC
Q 008356 81 SAPTAGISFSSDDKIIASVG-LD-KKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQ 156 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs-~D-GtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs-~DG~V~VWDlrt~~~ 156 (568)
......+++.|.+..|+... .. +.|..+++......... ..-.....|+|+|++..|+.+. ..+.|..+|++....
T Consensus 201 l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 280 (386)
T 3v65_B 201 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR 280 (386)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC
T ss_pred CCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee
Confidence 46789999999665555444 44 78999998755443333 2334578999998766666554 567899999886532
Q ss_pred ceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCC
Q 008356 157 PLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPD 207 (568)
Q Consensus 157 ~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWD 207 (568)
..++. ........|++.. +.++++....+.|..+|
T Consensus 281 -~~~~~--~~~~~P~giav~~-------------~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 281 -KAVIS--QGLPHPFAITVFE-------------DSLYWTDWHTKSINSAN 315 (386)
T ss_dssp -EEEEC--SSCSSEEEEEEET-------------TEEEEEETTTTEEEEEE
T ss_pred -EEEEE--CCCCCceEEEEEC-------------CEEEEeeCCCCeEEEEE
Confidence 22332 2234456666632 23444444455666555
No 267
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.61 E-value=0.053 Score=56.92 Aligned_cols=172 Identities=12% Similarity=-0.033 Sum_probs=105.2
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCc---eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 008356 2 YNCKDEHLASIS-LSGDLILHNLASGA---KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (568)
Q Consensus 2 fSpdG~~LasGs-~DG~V~VWDl~tg~---~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l 77 (568)
|++.++.|+... ..+.|+.+++.... ....+..........|++...+++++++-...+.|.+.++++... ...+
T Consensus 119 ~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~-~~l~ 197 (400)
T 3p5b_L 119 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLF 197 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSE-EEEE
T ss_pred eeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCce-EEEE
Confidence 455555555554 34667777765321 112222223345677899886666777777788999999987653 2333
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEe-C-CCeEEEEECCCCceeeEee-cCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCC
Q 008356 78 KQHSAPTAGISFSSDDKIIASVG-L-DKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRG 153 (568)
Q Consensus 78 ~~H~~~VtslafsPdg~~LaSgs-~-DGtV~IWDlrt~~~v~~~~-h~~~ItsLafsPdg~~LasGs-~DG~V~VWDlrt 153 (568)
.........|++.|.+.+|+... . .+.|...++........+. .-.....|++++++..|+.+. ..+.|..+|++.
T Consensus 198 ~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 198 RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp ECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred eCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 33445689999999665555544 2 4689999987654443332 335788999998877776665 567899999987
Q ss_pred CCCceEEEeecCCCCCeeEEEE
Q 008356 154 KPQPLTVLRACSSSEAVSSLCW 175 (568)
Q Consensus 154 ~~~~v~~l~~~~h~~~VtsLaf 175 (568)
... ..++...........|++
T Consensus 278 ~~~-~~~~~~~~~l~~P~gl~v 298 (400)
T 3p5b_L 278 GNR-KTILEDEKRLAHPFSLAV 298 (400)
T ss_dssp CCC-EEEEECSSTTSSEEEEEE
T ss_pred Ccc-EEEEeCCCCCCCCEEEEE
Confidence 532 233332122234456665
No 268
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.58 E-value=0.0082 Score=62.09 Aligned_cols=152 Identities=13% Similarity=0.151 Sum_probs=103.9
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCceeEE-eeC-----CCCCcEEEEEE---ccCCCeEEEEEe-------------C
Q 008356 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAE-LKD-----PNEQVLRVLDY---SRNSRHLLVTAG-------------D 58 (568)
Q Consensus 2 fSpdG~~LasGs-~DG~V~VWDl~tg~~v~~-l~~-----~h~~~Vs~Laf---spdg~~lLaTgs-------------~ 58 (568)
|++.+.+|..++ ..|.|..||...+..... +.. .....+..|.| .++++ ++++.. .
T Consensus 20 wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af~~~g~~~~g 98 (334)
T 2p9w_A 20 YDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAKSFNFADQSSHG 98 (334)
T ss_dssp EETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETTTTCTTSCCSSS
T ss_pred CcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCc-EEEEEcccccccccccccCC
Confidence 666667777777 689999999875544333 221 01124578999 68865 666543 2
Q ss_pred CCeEEEEECC---CCCceeE-Eecc-----------CCCCeEEEEEcCCCCEEEEEeCC-CeEEEEECCCCceeeEee--
Q 008356 59 DGTLHLWDTT---GRSPKVS-WLKQ-----------HSAPTAGISFSSDDKIIASVGLD-KKLYTYDPGSRRPSSCIT-- 120 (568)
Q Consensus 59 DGtV~VWDl~---t~~~~v~-~l~~-----------H~~~VtslafsPdg~~LaSgs~D-GtV~IWDlrt~~~v~~~~-- 120 (568)
+..|..||+. +++.... .+.. -...+++++..++|+..++++.. +.|..+|...........
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~ 178 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWES 178 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECC
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecC
Confidence 6789999998 5553222 2211 11248899999999999999988 888888876543222221
Q ss_pred ----cCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCC
Q 008356 121 ----YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (568)
Q Consensus 121 ----h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~ 154 (568)
.....+.|+++|+|+.|++....|.|..+|++..
T Consensus 179 ~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 179 GNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 1223679999999999999877999999999843
No 269
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.56 E-value=0.0037 Score=69.75 Aligned_cols=154 Identities=9% Similarity=0.008 Sum_probs=100.2
Q ss_pred CCCCEEEEEECC----------------CcEEEEECCCCceeEEeeCCCCC---------cEEEEEEc-cCCC--eEEEE
Q 008356 4 CKDEHLASISLS----------------GDLILHNLASGAKAAELKDPNEQ---------VLRVLDYS-RNSR--HLLVT 55 (568)
Q Consensus 4 pdG~~LasGs~D----------------G~V~VWDl~tg~~v~~l~~~h~~---------~Vs~Lafs-pdg~--~lLaT 55 (568)
++..+|+.+..+ +.|..+|.++|+.+-.++..+.+ .+. +... .+|+ .+++.
T Consensus 250 ~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~ 328 (599)
T 1w6s_A 250 PGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTH 328 (599)
T ss_dssp TTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEE
T ss_pred CCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEE
Confidence 456677777655 37999999999998887754321 121 2222 4563 46788
Q ss_pred EeCCCeEEEEECCCCCceeEEecc------------CCCCe--------------------------EEEEEcCCCCEEE
Q 008356 56 AGDDGTLHLWDTTGRSPKVSWLKQ------------HSAPT--------------------------AGISFSSDDKIIA 97 (568)
Q Consensus 56 gs~DGtV~VWDl~t~~~~v~~l~~------------H~~~V--------------------------tslafsPdg~~La 97 (568)
++.+|.++++|..+++.+...-.. ...++ ..++++|+..+++
T Consensus 329 ~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~y 408 (599)
T 1w6s_A 329 PDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFF 408 (599)
T ss_dssp ECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEE
T ss_pred ECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEE
Confidence 899999999999888743222111 01111 2355666555554
Q ss_pred EE---------------------------------e------CCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEE
Q 008356 98 SV---------------------------------G------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILT 138 (568)
Q Consensus 98 Sg---------------------------------s------~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~La 138 (568)
+. + .+|.|..||+.+++.+....+..+...-.+...+.+++
T Consensus 409 v~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf 488 (599)
T 1w6s_A 409 MGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVF 488 (599)
T ss_dssp EEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEE
T ss_pred EeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEE
Confidence 42 1 34789999999999887775444333222333567888
Q ss_pred EEEcCCeEEEEECCCCCCce
Q 008356 139 AGTSNGRVVFYDIRGKPQPL 158 (568)
Q Consensus 139 sGs~DG~V~VWDlrt~~~~v 158 (568)
+++.|+.|+.||.++++...
T Consensus 489 ~gt~dg~l~A~D~~tG~~lW 508 (599)
T 1w6s_A 489 YGTLDGYLKARDSDTGDLLW 508 (599)
T ss_dssp EECTTSEEEEEETTTCCEEE
T ss_pred EECCCCeEEEEECCCCCEEE
Confidence 89999999999999986443
No 270
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.53 E-value=0.03 Score=57.03 Aligned_cols=190 Identities=9% Similarity=-0.035 Sum_probs=111.4
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCcee-EEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 008356 2 YNCKDEHLASIS-LSGDLILHNLASGAKA-AELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (568)
Q Consensus 2 fSpdG~~LasGs-~DG~V~VWDl~tg~~v-~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~ 79 (568)
|.+.++.|+... ..+.|+.+++..+... ..+.. .-.....+++.+.+.+++++-...+.|.++++++... ......
T Consensus 42 ~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~-~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~-~~l~~~ 119 (318)
T 3sov_A 42 FVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVS-GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-KVLFWQ 119 (318)
T ss_dssp EEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEE-CCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECS
T ss_pred EEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcC-CCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcE-EEEEeC
Confidence 344344444443 3456666666544211 11211 1123456888876666777777788999999987653 223334
Q ss_pred CCCCeEEEEEcCCCCEEEEEe--CCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCCCC
Q 008356 80 HSAPTAGISFSSDDKIIASVG--LDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKP 155 (568)
Q Consensus 80 H~~~VtslafsPdg~~LaSgs--~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs-~DG~V~VWDlrt~~ 155 (568)
.......+++.|.+..|+... ..+.|..+++........+ ..-.....+++++++..|+.+. ..+.|..+|++...
T Consensus 120 ~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~ 199 (318)
T 3sov_A 120 ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN 199 (318)
T ss_dssp SCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc
Confidence 456689999999655555554 3578999998754333333 2334578999999766666654 56889999998643
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 156 QPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 156 ~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
. ..++. ........+++.. +.++++....+.|..+|..
T Consensus 200 ~-~~~~~--~~~~~P~glav~~-------------~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 200 R-QAVVK--GSLPHPFALTLFE-------------DILYWTDWSTHSILACNKY 237 (318)
T ss_dssp C-EEEEC--SCCSCEEEEEEET-------------TEEEEEETTTTEEEEEETT
T ss_pred e-EEEec--CCCCCceEEEEeC-------------CEEEEEecCCCeEEEEECC
Confidence 2 22222 2234455666543 2344444445666666653
No 271
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.47 E-value=0.0048 Score=68.26 Aligned_cols=113 Identities=12% Similarity=0.094 Sum_probs=70.7
Q ss_pred CCEEEEEEC------CCcEEEEECCCCceeEEeeCCCCC-------------------------------------cEEE
Q 008356 6 DEHLASISL------SGDLILHNLASGAKAAELKDPNEQ-------------------------------------VLRV 42 (568)
Q Consensus 6 G~~LasGs~------DG~V~VWDl~tg~~v~~l~~~h~~-------------------------------------~Vs~ 42 (568)
+..++++.. +|.|+.+|.++|+.+..+...... ....
T Consensus 160 ~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~ 239 (571)
T 2ad6_A 160 KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGW 239 (571)
T ss_dssp TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSC
T ss_pred CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeee
Confidence 445666654 789999999999988776642110 0012
Q ss_pred EEEccCCCeEEEEEeCC----------------CeEEEEECCCCCceeEEec-cCC--------CCeEEEEEcCCCC---
Q 008356 43 LDYSRNSRHLLVTAGDD----------------GTLHLWDTTGRSPKVSWLK-QHS--------APTAGISFSSDDK--- 94 (568)
Q Consensus 43 Lafspdg~~lLaTgs~D----------------GtV~VWDl~t~~~~v~~l~-~H~--------~~VtslafsPdg~--- 94 (568)
+++.++.. +++.+..+ +.|..+|.++++...+.-. .|. .++. +....+++
T Consensus 240 ~a~d~~~g-~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~ 317 (571)
T 2ad6_A 240 YAYDPKLN-LFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTP 317 (571)
T ss_dssp CEEETTTT-EEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEE
T ss_pred EEEcCCCC-eEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEE
Confidence 45666655 45555432 3699999998874332221 121 2221 22223664
Q ss_pred EEEEEeCCCeEEEEECCCCceeeEee
Q 008356 95 IIASVGLDKKLYTYDPGSRRPSSCIT 120 (568)
Q Consensus 95 ~LaSgs~DGtV~IWDlrt~~~v~~~~ 120 (568)
.++.++.+|.|+++|..+++.+..+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeec
Confidence 57788899999999999998876653
No 272
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.45 E-value=0.0033 Score=66.96 Aligned_cols=149 Identities=8% Similarity=0.070 Sum_probs=95.6
Q ss_pred ccC-CCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCC----eEEEEECCCCCceeEE
Q 008356 2 YNC-KDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG----TLHLWDTTGRSPKVSW 76 (568)
Q Consensus 2 fSp-dG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DG----tV~VWDl~t~~~~v~~ 76 (568)
|+| ++..|+++...+.|+.+|+..+....... .......|+|+++++.++++...++ .+.+++..........
T Consensus 144 vdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~ 221 (430)
T 3tc9_A 144 FDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS--GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITE 221 (430)
T ss_dssp EETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC--CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEE
T ss_pred ECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec--CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeee
Confidence 455 35567666665789999987655443333 3445678999999984444443322 3444554333211122
Q ss_pred eccCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCceeeEee--cCCCeEEEEEecCCCEEEEEE-cCCeEEEEECC
Q 008356 77 LKQHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIR 152 (568)
Q Consensus 77 l~~H~~~VtslafsP-dg~~LaSgs~DGtV~IWDlrt~~~v~~~~--h~~~ItsLafsPdg~~LasGs-~DG~V~VWDlr 152 (568)
+.. ......++++| ++.++++-..++.|..+|...+....... .......++|+|++++|++.. .++.|..++.+
T Consensus 222 l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 222 LTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 222 33467788999 77777776678899999998765433332 234578999999999665554 67889998876
Q ss_pred C
Q 008356 153 G 153 (568)
Q Consensus 153 t 153 (568)
.
T Consensus 301 ~ 301 (430)
T 3tc9_A 301 W 301 (430)
T ss_dssp T
T ss_pred c
Confidence 4
No 273
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.40 E-value=0.0037 Score=71.23 Aligned_cols=135 Identities=11% Similarity=0.072 Sum_probs=87.2
Q ss_pred cEEEEEEc-cCCCeEEEEEeCCC----eEEEEECCCC-CceeEEeccCCCCeEEEEEcCCCCEEEEEeCC-----CeEEE
Q 008356 39 VLRVLDYS-RNSRHLLVTAGDDG----TLHLWDTTGR-SPKVSWLKQHSAPTAGISFSSDDKIIASVGLD-----KKLYT 107 (568)
Q Consensus 39 ~Vs~Lafs-pdg~~lLaTgs~DG----tV~VWDl~t~-~~~v~~l~~H~~~VtslafsPdg~~LaSgs~D-----GtV~I 107 (568)
.+...+|+ |+|+.++++...+| .|+++|+.++ +.....+. .....+.|+||++.|+....| ..|++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 56778999 99996666655554 4999999887 52111111 113468899999988877765 36889
Q ss_pred EECCCCce--eeEe--ecCCCeEEEEEecCCCEEEEEEc---CCeEEEEECCCCCCce--EEEeecCCCCCeeEEEEcc
Q 008356 108 YDPGSRRP--SSCI--TYEAPFSSLAFIDDDWILTAGTS---NGRVVFYDIRGKPQPL--TVLRACSSSEAVSSLCWQR 177 (568)
Q Consensus 108 WDlrt~~~--v~~~--~h~~~ItsLafsPdg~~LasGs~---DG~V~VWDlrt~~~~v--~~l~~~~h~~~VtsLafsp 177 (568)
+++.+++. ..++ ........+.|+|||++|+.... ...|+++|+.+..... ..+. .........+.|+.
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~-~~~~~~~~s~~~~~ 329 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVR-PREKGVRYDVQMHG 329 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESS-CCCTTCCEEEEEET
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEee-cCCCCceEEEeeee
Confidence 99987653 2333 23345678899999999887663 3468899998753222 2222 12344555565544
No 274
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.40 E-value=0.034 Score=55.25 Aligned_cols=143 Identities=15% Similarity=0.199 Sum_probs=94.6
Q ss_pred CCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCce
Q 008356 37 EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRP 115 (568)
Q Consensus 37 ~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~-~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~ 115 (568)
...+..++|+|++..++++...++.|...|.. ++. .+.+. .-....-.|++.+++.++++.-.++.|.++++.....
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v-~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDL-IRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSE 103 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCE-EEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCC
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCE-EEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCe
Confidence 34689999999887677778889999999998 442 33332 2235588899998888777766788999998865442
Q ss_pred ---eeEee-------cCCCeEEEEEecCCCEEEEEEcCCeEEEEECCC--CCCceEEEee-----cCCCCCeeEEEEccC
Q 008356 116 ---SSCIT-------YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG--KPQPLTVLRA-----CSSSEAVSSLCWQRA 178 (568)
Q Consensus 116 ---v~~~~-------h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt--~~~~v~~l~~-----~~h~~~VtsLafspd 178 (568)
+.... ....+..++|+|.++.|+++.+.....||.++. ....+..+.. ..+...+.+++++|.
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~ 183 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ 183 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETT
T ss_pred eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCC
Confidence 12221 234468999999988888877766556665542 1112233321 123345788999996
Q ss_pred CCe
Q 008356 179 KPV 181 (568)
Q Consensus 179 g~~ 181 (568)
...
T Consensus 184 tg~ 186 (255)
T 3qqz_A 184 KNT 186 (255)
T ss_dssp TTE
T ss_pred CCe
Confidence 433
No 275
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.38 E-value=0.0069 Score=68.19 Aligned_cols=195 Identities=13% Similarity=0.038 Sum_probs=115.2
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEeeCCCCCc----------EEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeE
Q 008356 6 DEHLASISLSGDLILHNLASGAKAAELKDPNEQV----------LRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVS 75 (568)
Q Consensus 6 G~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~----------Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~ 75 (568)
+..|++++.++.|+.+|..+|+.+-.+....... ...+.+. +. .++.++.|+.|+.+|..+++....
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALW--GD-KVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEE--BT-EEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEE--CC-EEEEEcCCCEEEEEECCCCCEeee
Confidence 5677888889999999999999988776422110 1112222 33 577888999999999998884433
Q ss_pred EeccCCCCeEEEEEcC--CCCEEEEEeC------CCeEEEEECCCCceeeEeecC--C----------------------
Q 008356 76 WLKQHSAPTAGISFSS--DDKIIASVGL------DKKLYTYDPGSRRPSSCITYE--A---------------------- 123 (568)
Q Consensus 76 ~l~~H~~~VtslafsP--dg~~LaSgs~------DGtV~IWDlrt~~~v~~~~h~--~---------------------- 123 (568)
...........+...| .+..++.+.. ++.|+.+|.++++.+..+... .
T Consensus 143 ~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~ 222 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQY 222 (668)
T ss_dssp EECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCH
T ss_pred eccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccce
Confidence 2221110001111111 2344555432 589999999999988776321 0
Q ss_pred --------CeEEEEEecCCCEEEEEEcCCe-------------------EEEEECCCCCCceEEEeecCCC-------CC
Q 008356 124 --------PFSSLAFIDDDWILTAGTSNGR-------------------VVFYDIRGKPQPLTVLRACSSS-------EA 169 (568)
Q Consensus 124 --------~ItsLafsPdg~~LasGs~DG~-------------------V~VWDlrt~~~~v~~l~~~~h~-------~~ 169 (568)
....++++++...++++..++. |..+|.++++...+ +....|. .+
T Consensus 223 w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~-~~~~~~~~wd~~~~~~ 301 (668)
T 1kv9_A 223 WKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWH-YQVTPGDSWDFTATQQ 301 (668)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEE-EESSTTCCSCCCCCSC
T ss_pred eeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeE-eecCCCccccccCCCC
Confidence 1124788888889998887764 99999998853322 2222232 12
Q ss_pred eeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 170 VSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 170 VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
+....+..+|+ ...+++.++.++.++++|......
T Consensus 302 ~~~~d~~~~G~---------~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 302 ITLAELNIDGK---------PRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp EEEEEEEETTE---------EEEEEEECCTTSEEEEEETTTCCE
T ss_pred cEEEEeccCCc---------EEEEEEEECCCCEEEEEECCCCCE
Confidence 22122222221 112455666677787777665443
No 276
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.36 E-value=0.0018 Score=72.36 Aligned_cols=150 Identities=16% Similarity=0.129 Sum_probs=88.6
Q ss_pred cC-CCCEEEEEECCC-----------cEEEEECCCCc--eeEEeeCCCCCcEEEEEEccCCCeEEEEEe-CCCeEEEEEC
Q 008356 3 NC-KDEHLASISLSG-----------DLILHNLASGA--KAAELKDPNEQVLRVLDYSRNSRHLLVTAG-DDGTLHLWDT 67 (568)
Q Consensus 3 Sp-dG~~LasGs~DG-----------~V~VWDl~tg~--~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs-~DGtV~VWDl 67 (568)
.+ ++++++.|+.+. .+.+||+.+++ .+..+...+......+++..+++ +++.|+ .+..+.+||.
T Consensus 194 ~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~-lyv~GG~~~~~v~~yd~ 272 (656)
T 1k3i_A 194 EPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQ-IVVTGGNDAKKTSLYDS 272 (656)
T ss_dssp ETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSC-EEEECSSSTTCEEEEEG
T ss_pred EecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCC-EEEeCCCCCCceEEecC
Confidence 34 778888887643 58899988765 33344332333444567778887 788887 4568999998
Q ss_pred CCCCceeEEecc-C-CCCeEEEEEcCCCCEEEEEe-CC-----CeEEEEECCCCceeeEe-----ecCCCeEEEEEecCC
Q 008356 68 TGRSPKVSWLKQ-H-SAPTAGISFSSDDKIIASVG-LD-----KKLYTYDPGSRRPSSCI-----TYEAPFSSLAFIDDD 134 (568)
Q Consensus 68 ~t~~~~v~~l~~-H-~~~VtslafsPdg~~LaSgs-~D-----GtV~IWDlrt~~~v~~~-----~h~~~ItsLafsPdg 134 (568)
.+.. ...+.. + ...-.++++.+++++++.|+ .+ ..+.+||..+.+-...- .....-....+..++
T Consensus 273 ~t~~--W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~ 350 (656)
T 1k3i_A 273 SSDS--WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDN 350 (656)
T ss_dssp GGTE--EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTC
T ss_pred cCCc--eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCC
Confidence 7654 222211 1 11223455667899999998 44 46999999886543320 000000001222355
Q ss_pred CEEEEEEcCC---------eEEEEECCCCC
Q 008356 135 WILTAGTSNG---------RVVFYDIRGKP 155 (568)
Q Consensus 135 ~~LasGs~DG---------~V~VWDlrt~~ 155 (568)
+.++.|+.+| .|..||.....
T Consensus 351 ~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~ 380 (656)
T 1k3i_A 351 HAWLFGWKKGSVFQAGPSTAMNWYYTSGSG 380 (656)
T ss_dssp SCCEEECGGGCEEECCSSSEEEEEECSTTC
T ss_pred ceEEEECCCCcEEEecCccceeeeecCCcc
Confidence 5566665554 46788887653
No 277
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.34 E-value=0.046 Score=62.88 Aligned_cols=179 Identities=7% Similarity=-0.048 Sum_probs=113.5
Q ss_pred CCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC---ceeEEeccCCCCeEEEEEc
Q 008356 14 LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS---PKVSWLKQHSAPTAGISFS 90 (568)
Q Consensus 14 ~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~---~~v~~l~~H~~~Vtslafs 90 (568)
....|+..++........+. ....+..|+|.+.+..++++-...+.|+.+++.+.. .....+.........|++.
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~--~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIP--NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 479 (791)
T ss_dssp CBSSEEEECTTSCCCEEEEC--SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred cccceeEeeccCCcceeeec--CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence 44568888876555444333 234566799998766577777778899999987631 1233344355667889999
Q ss_pred CCCC-EEEEEeCCCeEEEEECCCCceeeEee-cCCCeEEEEEecCCCEEEEEEc--CCeEEEEECCCCCCceEEEeecCC
Q 008356 91 SDDK-IIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTS--NGRVVFYDIRGKPQPLTVLRACSS 166 (568)
Q Consensus 91 Pdg~-~LaSgs~DGtV~IWDlrt~~~v~~~~-h~~~ItsLafsPdg~~LasGs~--DG~V~VWDlrt~~~~v~~l~~~~h 166 (568)
+.++ ++++-...+.|.+.++........+. .......|+++|.+.+|+.... .+.|.+.++..... ..++. ..
T Consensus 480 ~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~~lv~--~~ 556 (791)
T 3m0c_C 480 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVT--EN 556 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEEC--SS
T ss_pred ecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-EEEEe--CC
Confidence 8664 44555577899999998655444443 4456899999998666666553 37899999987632 22222 23
Q ss_pred CCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCC
Q 008356 167 SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (568)
Q Consensus 167 ~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDl 208 (568)
-.....|++++.+..| +++-.....|...|+
T Consensus 557 l~~P~GLavD~~~~~L-----------YwaD~~~~~I~~~d~ 587 (791)
T 3m0c_C 557 IQWPNGITLDLLSGRL-----------YWVDSKLHSISSIDV 587 (791)
T ss_dssp CSCEEEEEEETTTTEE-----------EEEETTTTEEEEEET
T ss_pred CCCceEEEEecCCCeE-----------EEEeCCCCcEEEEec
Confidence 3578899999764443 333344455666655
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.32 E-value=0.014 Score=62.16 Aligned_cols=148 Identities=9% Similarity=0.043 Sum_probs=92.9
Q ss_pred ccCC--CCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCC---Ce-EEEEECCCCCceeE
Q 008356 2 YNCK--DEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD---GT-LHLWDTTGRSPKVS 75 (568)
Q Consensus 2 fSpd--G~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~D---Gt-V~VWDl~t~~~~v~ 75 (568)
|.++ +..|+++...+.|+.+|+.+++...... .......|+|+++++ ++++-..+ .. +..++.........
T Consensus 146 vd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~--~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~ 222 (433)
T 4hw6_A 146 FDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT--NIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERL 222 (433)
T ss_dssp ECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC--CCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEE
T ss_pred EccccCCCEEEEEeCCCCEEEEECCCCEEEEeec--CCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeeccc
Confidence 4553 4556666555889999987776554333 344578899999998 66654422 22 33333332221111
Q ss_pred EeccCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcee-eEee--cCCCeEEEEEecCCCEEEEEE-cCCeEEEEE
Q 008356 76 WLKQHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPGSRRPS-SCIT--YEAPFSSLAFIDDDWILTAGT-SNGRVVFYD 150 (568)
Q Consensus 76 ~l~~H~~~VtslafsP-dg~~LaSgs~DGtV~IWDlrt~~~v-~~~~--h~~~ItsLafsPdg~~LasGs-~DG~V~VWD 150 (568)
.+. .......+++++ +++++++-..++.|+.+|..++... ..+. .......++|+|++++|+++. ..+.|+.++
T Consensus 223 ~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~ 301 (433)
T 4hw6_A 223 SLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVD 301 (433)
T ss_dssp EEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEe
Confidence 122 234467789999 7776666667889999999877652 2222 222345799999999666555 568899988
Q ss_pred CCC
Q 008356 151 IRG 153 (568)
Q Consensus 151 lrt 153 (568)
.+.
T Consensus 302 ~d~ 304 (433)
T 4hw6_A 302 YNR 304 (433)
T ss_dssp BCT
T ss_pred CCC
Confidence 763
No 279
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.29 E-value=0.0035 Score=70.05 Aligned_cols=179 Identities=10% Similarity=0.046 Sum_probs=100.9
Q ss_pred cCCCCEEEEEEC-CCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEe-CC-----CeEEEEECCCCCceeE
Q 008356 3 NCKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAG-DD-----GTLHLWDTTGRSPKVS 75 (568)
Q Consensus 3 SpdG~~LasGs~-DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs-~D-----GtV~VWDl~t~~~~v~ 75 (568)
..+|++++.|+. ++.+.+||..+++-...-.-+....-.+++..++++ +++.|+ .+ ..+.+||..+..- .
T Consensus 251 ~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t~~W--~ 327 (656)
T 1k3i_A 251 DGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSSKTW--T 327 (656)
T ss_dssp CTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTTTEE--E
T ss_pred CCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCCCcc--e
Confidence 467888899884 568999998766533221111112223345666777 778877 44 5699999866431 1
Q ss_pred Eec---------c-------CC-------------------------------------------------CCeEEEEEc
Q 008356 76 WLK---------Q-------HS-------------------------------------------------APTAGISFS 90 (568)
Q Consensus 76 ~l~---------~-------H~-------------------------------------------------~~Vtslafs 90 (568)
.+. . +. ..-.++.|.
T Consensus 328 ~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~ 407 (656)
T 1k3i_A 328 SLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYD 407 (656)
T ss_dssp EETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEE
T ss_pred eCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEecc
Confidence 110 0 00 011223333
Q ss_pred C-CCCEEEEEeCCC-----------eEEEEECCCCceeeEe----ecCCCeEEEEEecCCCEEEEEEcC-----------
Q 008356 91 S-DDKIIASVGLDK-----------KLYTYDPGSRRPSSCI----TYEAPFSSLAFIDDDWILTAGTSN----------- 143 (568)
Q Consensus 91 P-dg~~LaSgs~DG-----------tV~IWDlrt~~~v~~~----~h~~~ItsLafsPdg~~LasGs~D----------- 143 (568)
. ++++++.|+.++ .|.+||..+.+-.... .......+++..++++++++|+.+
T Consensus 408 ~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~ 487 (656)
T 1k3i_A 408 AVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPV 487 (656)
T ss_dssp TTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBC
T ss_pred CCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcc
Confidence 3 667777777532 6788888776544332 122223455677899999999864
Q ss_pred CeEEEEECCCCCCceEEEeecCCCC-CeeEEEEccCCCeEEEec
Q 008356 144 GRVVFYDIRGKPQPLTVLRACSSSE-AVSSLCWQRAKPVFIDET 186 (568)
Q Consensus 144 G~V~VWDlrt~~~~v~~l~~~~h~~-~VtsLafspdg~~Las~s 186 (568)
..+.+||+.+.. ...+....+.. ......+.++++.++.++
T Consensus 488 ~~v~~ydp~t~~--W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 488 FTPEIYVPEQDT--FYKQNPNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp CCCEEEEGGGTE--EEECCCCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred cceEEEcCCCCc--eeecCCCCCccccccHhhcCCCcEEEecCC
Confidence 468999997652 22222111111 122344567777776664
No 280
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.20 E-value=0.12 Score=57.72 Aligned_cols=171 Identities=11% Similarity=0.002 Sum_probs=112.5
Q ss_pred CEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEE
Q 008356 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAG 86 (568)
Q Consensus 7 ~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~Vts 86 (568)
.+|+.+ ....|+..+++..+....+....-.....|+|++.+..++++-..++.|+.+++++... ...+.........
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~-~~v~~~g~~~P~G 84 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL-EHVVEFGLDYPEG 84 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCE
T ss_pred cEEEEE-eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc-EEEEeCCCCCcce
Confidence 345544 56789999998665443333222235677999998776777777789999999987652 2333333345788
Q ss_pred EEEcCCCC-EEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEc--CCeEEEEECCCCCCceEEEe
Q 008356 87 ISFSSDDK-IIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTS--NGRVVFYDIRGKPQPLTVLR 162 (568)
Q Consensus 87 lafsPdg~-~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~--DG~V~VWDlrt~~~~v~~l~ 162 (568)
+++...+. ++++-...+.|.+.++........+ ..-.....|+++|...+|+.... .+.|...+++.... ..+.
T Consensus 85 lAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~--~~l~ 162 (628)
T 4a0p_A 85 MAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER--TTLV 162 (628)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC--EEEE
T ss_pred EEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce--EEEE
Confidence 99987544 4455556789999999765443333 34456789999996556665552 57888899887642 2222
Q ss_pred ecCCCCCeeEEEEccCCCeEE
Q 008356 163 ACSSSEAVSSLCWQRAKPVFI 183 (568)
Q Consensus 163 ~~~h~~~VtsLafspdg~~La 183 (568)
........|+++++++.|.
T Consensus 163 --~~~~~P~GlalD~~~~~LY 181 (628)
T 4a0p_A 163 --PNVGRANGLTIDYAKRRLY 181 (628)
T ss_dssp --CSCSSEEEEEEETTTTEEE
T ss_pred --CCCCCcceEEEccccCEEE
Confidence 2345678899988655443
No 281
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.18 E-value=0.014 Score=65.02 Aligned_cols=201 Identities=12% Similarity=0.011 Sum_probs=115.8
Q ss_pred CCEEEEEEC-CCcEEEEEC-CCCceeEEeeCCCCC----------cEEEEEEccCCC---eEEEEEeCCCeEEEEECCCC
Q 008356 6 DEHLASISL-SGDLILHNL-ASGAKAAELKDPNEQ----------VLRVLDYSRNSR---HLLVTAGDDGTLHLWDTTGR 70 (568)
Q Consensus 6 G~~LasGs~-DG~V~VWDl-~tg~~v~~l~~~h~~----------~Vs~Lafspdg~---~lLaTgs~DGtV~VWDl~t~ 70 (568)
+..|++++. ++.|+.+|. .+|+.+-.+...... ..+.+.+.|.+. ..++.++.|+.|+.+|..++
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 556777777 899999999 899998777642211 112345533333 13778889999999999888
Q ss_pred CceeEEeccC-C--CCeEE-EEEcCCCCEEEEEe------CCCeEEEEECCCCceeeEeecCCCe---------------
Q 008356 71 SPKVSWLKQH-S--APTAG-ISFSSDDKIIASVG------LDKKLYTYDPGSRRPSSCITYEAPF--------------- 125 (568)
Q Consensus 71 ~~~v~~l~~H-~--~~Vts-lafsPdg~~LaSgs------~DGtV~IWDlrt~~~v~~~~h~~~I--------------- 125 (568)
+...+.-... . ..+.+ ..+. ++ .++.++ .++.|+.+|.++++.+..+......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~-~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~ 219 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV-KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPH 219 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE-TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGG
T ss_pred CEEEeecCCCCCccceeecCCEEE-CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccccc
Confidence 7433221111 0 01111 1111 34 455544 3899999999999988776433221
Q ss_pred ------------------------EEEEEecCCCEEEEEEcCC----------------eEEEEECCCCCCceEEEeecC
Q 008356 126 ------------------------SSLAFIDDDWILTAGTSNG----------------RVVFYDIRGKPQPLTVLRACS 165 (568)
Q Consensus 126 ------------------------tsLafsPdg~~LasGs~DG----------------~V~VWDlrt~~~~v~~l~~~~ 165 (568)
..+++.++...++.+..++ .|..+|.++++.. -.++...
T Consensus 220 ~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~-W~~q~~~ 298 (599)
T 1w6s_A 220 YGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAK-FGYQKTP 298 (599)
T ss_dssp GCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEE-EEEESST
T ss_pred ccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCcee-eEeecCC
Confidence 1456777788888887653 7999999988533 2233222
Q ss_pred CCCCeeEEEEccCCCeEEEeccCCCC---eEEEEecCCCcEEcCCCCCCCc
Q 008356 166 SSEAVSSLCWQRAKPVFIDETTCKAE---TALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 166 h~~~VtsLafspdg~~Las~s~ssd~---~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
|...-..+ .....++.. ...++ .+++.++.++.+.++|.+....
T Consensus 299 ~d~wd~d~---~~~p~l~d~-~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 299 HDEWDYAG---VNVMMLSEQ-KDKDGKARKLLTHPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp TCSSCCCC---CCCCEEEEE-ECTTSCEEEEEEEECTTSEEEEEETTTCCE
T ss_pred CccccccC---CCccEEEec-cccCCcEEEEEEEECCCcEEEEEECCCCCE
Confidence 32210000 001111111 00112 4556566788888888766554
No 282
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.18 E-value=0.01 Score=63.17 Aligned_cols=152 Identities=13% Similarity=0.048 Sum_probs=94.9
Q ss_pred EEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCC-C----eEEEEECCCC
Q 008356 40 LRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLD-K----KLYTYDPGSR 113 (568)
Q Consensus 40 Vs~Lafsp-dg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~D-G----tV~IWDlrt~ 113 (568)
...|+|+| ++. .|+.+...+.|+.+|+.+.. +..+.........|+|++++++|+.+... + .+.+++. .+
T Consensus 139 P~~lavdp~~~g-~Lyv~d~~~~I~~id~~~~~--v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 139 AVWLSFDPKNHN-HLYLVGEQHPTRLIDFEKEY--VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCEEEEETTEEE-EEEEEEBTEEEEEEETTTTE--EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCEEEECCCCCC-eEEEEeCCCcEEEEECCCCE--EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 35688997 344 35555555889999988765 34444456678999999999966666542 2 3444443 33
Q ss_pred cee--eEeecCCCeEEEEEec-CCCEEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCC
Q 008356 114 RPS--SCITYEAPFSSLAFID-DDWILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKA 190 (568)
Q Consensus 114 ~~v--~~~~h~~~ItsLafsP-dg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd 190 (568)
... ..+........++++| ++.++++-..++.|..||...... ..... .........++|+|+|++|..
T Consensus 215 ~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~-~~~~~-~~~~~~P~gia~~pdG~~lyv------ 286 (430)
T 3tc9_A 215 GFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET-TPLFT-IQDSGWEFHIQFHPSGNYAYI------ 286 (430)
T ss_dssp TSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE-EEEEE-CSSSSCCEEEEECTTSSEEEE------
T ss_pred ceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEEE-cCCCCcceeEEEcCCCCEEEE------
Confidence 222 2333344567889999 677666666789999999986531 12222 222345788999998764433
Q ss_pred CeEEEEecCCCcEEcCCC
Q 008356 191 ETALLGGAVGDSILMPDP 208 (568)
Q Consensus 191 ~~~Lls~s~Dg~V~VWDl 208 (568)
+......|..+|.
T Consensus 287 -----~d~~~~~I~~~~~ 299 (430)
T 3tc9_A 287 -----VVVNQHYILRSDY 299 (430)
T ss_dssp -----EETTTTEEEEEEE
T ss_pred -----EECCCCEEEEEeC
Confidence 3334556666554
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.18 E-value=0.1 Score=59.97 Aligned_cols=151 Identities=11% Similarity=-0.030 Sum_probs=95.5
Q ss_pred cCCCCEEEEEE-CCCcEEEEECCCC----ceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe
Q 008356 3 NCKDEHLASIS-LSGDLILHNLASG----AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL 77 (568)
Q Consensus 3 SpdG~~LasGs-~DG~V~VWDl~tg----~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l 77 (568)
.+.++.|+... ..+.|+.+++... .....+.. .......|++...+++++++-...+.|.+.++++... ...+
T Consensus 432 d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~-~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~-~~l~ 509 (791)
T 3m0c_C 432 EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTLF 509 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEEC--------CEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE-EEEE
T ss_pred cccCCeeEEeeccceeEEEEeccCCCCCcceeEEEec-CCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE-EEEE
Confidence 34344444433 3455666666432 11222221 2233456888888876777777889999999987652 2333
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEe-C-CCeEEEEECCCCceeeEee-cCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCC
Q 008356 78 KQHSAPTAGISFSSDDKIIASVG-L-DKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRG 153 (568)
Q Consensus 78 ~~H~~~VtslafsPdg~~LaSgs-~-DGtV~IWDlrt~~~v~~~~-h~~~ItsLafsPdg~~LasGs-~DG~V~VWDlrt 153 (568)
.........|++.|...+|+... . .+.|.+.++........+. .-.....|++++.+..|+.+. ..+.|..++++.
T Consensus 510 ~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 510 RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 34455689999999655555554 3 3789999987655444443 335789999998776666664 467899999987
Q ss_pred CC
Q 008356 154 KP 155 (568)
Q Consensus 154 ~~ 155 (568)
..
T Consensus 590 ~~ 591 (791)
T 3m0c_C 590 GN 591 (791)
T ss_dssp CS
T ss_pred Cc
Confidence 53
No 284
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.15 E-value=0.016 Score=59.82 Aligned_cols=156 Identities=12% Similarity=0.106 Sum_probs=103.7
Q ss_pred EEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc----CC--CCeEEEEE---cCCCCEEEEEe-----------
Q 008356 41 RVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ----HS--APTAGISF---SSDDKIIASVG----------- 100 (568)
Q Consensus 41 s~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~----H~--~~Vtslaf---sPdg~~LaSgs----------- 100 (568)
.+++|.+....++++.-.+++|..||...+......+.. .. ..+..|.| .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 457898866644555558999999999755421222221 11 13689999 68877777544
Q ss_pred --CCCeEEEEECC---CCceeeEeec--------------CCCeEEEEEecCCCEEEEEEcC-CeEEEEECCCCCCceEE
Q 008356 101 --LDKKLYTYDPG---SRRPSSCITY--------------EAPFSSLAFIDDDWILTAGTSN-GRVVFYDIRGKPQPLTV 160 (568)
Q Consensus 101 --~DGtV~IWDlr---t~~~v~~~~h--------------~~~ItsLafsPdg~~LasGs~D-G~V~VWDlrt~~~~v~~ 160 (568)
.+..|..||+. +++.+..... ...+..++..++|+..++++.. +.|..++.+... ....
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~-~~~~ 174 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT-VSTF 174 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC-EEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE-Eeee
Confidence 26789999999 7877665531 1248899999999999999998 998888887652 2222
Q ss_pred Eeec---CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 161 LRAC---SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 161 l~~~---~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
.... ......+.|+++|+|..|+.. .+ ++.|..+|++
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~-----------~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAF-----------GG-PRALTAFDVS 214 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEE-----------SS-SSSEEEEECS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEE-----------cC-CCeEEEEcCC
Confidence 2111 112236789999986554443 33 7888888876
No 285
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.08 E-value=0.091 Score=59.66 Aligned_cols=167 Identities=12% Similarity=0.086 Sum_probs=109.0
Q ss_pred EEEEECCCcEEEEECCCCceeEEeeC------CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc---
Q 008356 9 LASISLSGDLILHNLASGAKAAELKD------PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ--- 79 (568)
Q Consensus 9 LasGs~DG~V~VWDl~tg~~v~~l~~------~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~--- 79 (568)
|..|..+ -|.+||..+++....... -....|.++...++|. |..|..++-|.+|+...... ..+..
T Consensus 276 lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~~--~~~~~~~~ 350 (795)
T 4a2l_A 276 LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG--MWLGTYFGGLNYYHPIRNRF--KNIRNIPY 350 (795)
T ss_dssp EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC--EEEEESSSCEEEECGGGGSS--EEECCCTT
T ss_pred EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC--EEEEECCCCeEEeCCCcccc--eEEcCCCC
Confidence 4445555 488899876654332211 1235689999888886 77788888899998765442 11211
Q ss_pred ----CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee---------cCCCeEEEEEecCCCEEEEEEcCCeE
Q 008356 80 ----HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT---------YEAPFSSLAFIDDDWILTAGTSNGRV 146 (568)
Q Consensus 80 ----H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~---------h~~~ItsLafsPdg~~LasGs~DG~V 146 (568)
....|.++...+++++ ..|..++-|..||..+++...... ....|.+++..++++.|.+|+.++-|
T Consensus 351 ~~~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl 429 (795)
T 4a2l_A 351 KNSLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGL 429 (795)
T ss_dssp SSSCSCSSEEEEEECTTSCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEE
T ss_pred CCCCCCCeeEEEEECCCCCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCce
Confidence 2356999998887774 456777679999988765443321 13568899998888867788887889
Q ss_pred EEEECCCCCCceEEEeec---CCCCCeeEEEEccCCCeEE
Q 008356 147 VFYDIRGKPQPLTVLRAC---SSSEAVSSLCWQRAKPVFI 183 (568)
Q Consensus 147 ~VWDlrt~~~~v~~l~~~---~h~~~VtsLafspdg~~La 183 (568)
.+||.++.. ...+... .....|.++...++|.+.+
T Consensus 430 ~~~d~~~~~--~~~~~~~~~~l~~~~v~~i~~d~~g~lwi 467 (795)
T 4a2l_A 430 SILHRNSGQ--VENFNQRNSQLVNENVYAILPDGEGNLWL 467 (795)
T ss_dssp EEEETTTCC--EEEECTTTSCCSCSCEEEEEECSSSCEEE
T ss_pred eEEeCCCCc--EEEeecCCCCcCCCeeEEEEECCCCCEEE
Confidence 999988753 2223210 1235688888777655433
No 286
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.08 E-value=0.29 Score=54.60 Aligned_cols=170 Identities=6% Similarity=-0.014 Sum_probs=110.4
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 2 YNCKDEHLASIS-LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 2 fSpdG~~LasGs-~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
|++.++.|+... .++.|+.+++........+.. .......|++...+++++++-...+.|.+.++++... ...+...
T Consensus 44 ~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~-g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~ 121 (628)
T 4a0p_A 44 FDVTDNRIYWTDISLKTISRAFMNGSALEHVVEF-GLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR-QVLVWKD 121 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECS-SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC-EEEECSS
T ss_pred EECCCCEEEEEECCCCeEEEEECCCCCcEEEEeC-CCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE-EEEEeCC
Confidence 556566665554 457788887754433333332 2234567888877776777777788999999987653 2223344
Q ss_pred CCCeEEEEEcCCCCEEEEEe--CCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCCCCCc
Q 008356 81 SAPTAGISFSSDDKIIASVG--LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGKPQP 157 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs--~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs-~DG~V~VWDlrt~~~~ 157 (568)
......|++.|...+|+... ..+.|...++........+..-.....|+++++++.|+.+. ..+.|..+|++....
T Consensus 122 l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~- 200 (628)
T 4a0p_A 122 LDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR- 200 (628)
T ss_dssp CCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-
T ss_pred CCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-
Confidence 56689999999555555444 35688888887665544445556789999999877766665 567899999987543
Q ss_pred eEEEeecCCCCCeeEEEEcc
Q 008356 158 LTVLRACSSSEAVSSLCWQR 177 (568)
Q Consensus 158 v~~l~~~~h~~~VtsLafsp 177 (568)
+++. ........+++..
T Consensus 201 -~v~~--~~l~~P~glav~~ 217 (628)
T 4a0p_A 201 -EVIA--DDLPHPFGLTQYQ 217 (628)
T ss_dssp -EEEE--ECCSCEEEEEEET
T ss_pred -EEee--ccCCCceEEEEEC
Confidence 3333 1223455677654
No 287
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.04 E-value=0.06 Score=61.17 Aligned_cols=166 Identities=10% Similarity=0.083 Sum_probs=107.2
Q ss_pred EEEEEECCCcEEEEECCCCceeEEeeC-------CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec--
Q 008356 8 HLASISLSGDLILHNLASGAKAAELKD-------PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-- 78 (568)
Q Consensus 8 ~LasGs~DG~V~VWDl~tg~~v~~l~~-------~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~-- 78 (568)
.|-+|..++-|..||..+++....... -....|.++...+++. +|..|..++-|.+||..++. ...+.
T Consensus 369 ~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-~lWigt~~~Gl~~~d~~~~~--~~~~~~~ 445 (795)
T 4a2l_A 369 NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKS-LVYIGTHAGGLSILHRNSGQ--VENFNQR 445 (795)
T ss_dssp CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTT-EEEEEETTTEEEEEETTTCC--EEEECTT
T ss_pred CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCC-EEEEEeCcCceeEEeCCCCc--EEEeecC
Confidence 355677777799999876654332211 1235688888887775 57888887889999988765 23332
Q ss_pred ---cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee-------cCCCeEEEEEecCCCEEEEEEcCCeEEE
Q 008356 79 ---QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-------YEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (568)
Q Consensus 79 ---~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~-------h~~~ItsLafsPdg~~LasGs~DG~V~V 148 (568)
.....|.++...+++++.+.. .+| |.+||..+++...... ....|.++...++|++.+ |+. +-|.+
T Consensus 446 ~~~l~~~~v~~i~~d~~g~lwigt-~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~-~Gl~~ 521 (795)
T 4a2l_A 446 NSQLVNENVYAILPDGEGNLWLGT-LSA-LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWI-GGE-EGLSV 521 (795)
T ss_dssp TSCCSCSCEEEEEECSSSCEEEEE-SSC-EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEE-EES-SCEEE
T ss_pred CCCcCCCeeEEEEECCCCCEEEEe-cCc-eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEE-EeC-CceEE
Confidence 234579999988888765544 444 8999988765433221 135689999988887655 444 55888
Q ss_pred EECCCCCCceEEEee-----cCCCCCeeEEEEccCCCeEE
Q 008356 149 YDIRGKPQPLTVLRA-----CSSSEAVSSLCWQRAKPVFI 183 (568)
Q Consensus 149 WDlrt~~~~v~~l~~-----~~h~~~VtsLafspdg~~La 183 (568)
||..+... .+.. ......|.++..+++|.+.+
T Consensus 522 ~~~~~~~~---~~~~~~~~~~l~~~~i~~i~~d~~g~lWi 558 (795)
T 4a2l_A 522 FKQEGLDI---QKASILPVSNVTKLFTNCIYEASNGIIWV 558 (795)
T ss_dssp EEEETTEE---EECCCSCSCGGGGSCEEEEEECTTSCEEE
T ss_pred EeCCCCeE---EEecCCCCCCCCCCeeEEEEECCCCCEEE
Confidence 99876521 1210 01234688888777665433
No 288
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.03 E-value=0.11 Score=57.89 Aligned_cols=183 Identities=7% Similarity=-0.014 Sum_probs=109.6
Q ss_pred EECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcC
Q 008356 12 ISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSS 91 (568)
Q Consensus 12 Gs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~VtslafsP 91 (568)
-.....|++.++........+....-.....|+|++.+..++++=...+.|+.+++++.......+.........+++.+
T Consensus 14 ~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~ 93 (619)
T 3s94_A 14 YANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDW 93 (619)
T ss_dssp EECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEET
T ss_pred EeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEe
Confidence 34567899999875431112221133445679999977756666556788999998765322233444445789999999
Q ss_pred CCC-EEEEEeCCCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEEc--CCeEEEEECCCCCCceEEEeecCCC
Q 008356 92 DDK-IIASVGLDKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGTS--NGRVVFYDIRGKPQPLTVLRACSSS 167 (568)
Q Consensus 92 dg~-~LaSgs~DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs~--DG~V~VWDlrt~~~~v~~l~~~~h~ 167 (568)
.++ ++++-...+.|.+.|+........+ ..-.....|+++|.+.+|+.... .+.|...+++.... ..... ..-
T Consensus 94 ~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~-~~l~~--~~~ 170 (619)
T 3s94_A 94 LGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIIN--SEI 170 (619)
T ss_dssp TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEEC--SSC
T ss_pred cCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce-EEEEe--CCC
Confidence 555 4455557789999999865543333 34456789999997666665553 46788888876532 22222 234
Q ss_pred CCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCC
Q 008356 168 EAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDP 208 (568)
Q Consensus 168 ~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDl 208 (568)
.....|+++++++.| +++-...+.|...|+
T Consensus 171 ~~P~Glald~~~~~L-----------Y~aD~~~~~I~~~~~ 200 (619)
T 3s94_A 171 YWPNGLTLDYEEQKL-----------YWADAKLNFIHKSNL 200 (619)
T ss_dssp SSEEEEEEETTTTEE-----------EEEETTTCCEEEESS
T ss_pred CCCcEEEEEccCCEE-----------EEEeCCCCeEEEecC
Confidence 567889999864443 333334455555554
No 289
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.03 E-value=0.0093 Score=66.15 Aligned_cols=77 Identities=12% Similarity=0.067 Sum_probs=51.3
Q ss_pred CCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEE--EEEecCCCE
Q 008356 59 DGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSS--LAFIDDDWI 136 (568)
Q Consensus 59 DGtV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~Its--LafsPdg~~ 136 (568)
+|.|+.||+.+++...+. .+..++..-.....+.+++.++.|+.|+.||.++++.+..+.....+.+ +.|..+|+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~--~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEH--KEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp SEEEEEECTTTCCEEEEE--EESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred cceEEEEECCCCCEEEEe--cCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEE
Confidence 688999999888743222 2222222212222467888899999999999999999988865554433 566667753
Q ss_pred E
Q 008356 137 L 137 (568)
Q Consensus 137 L 137 (568)
.
T Consensus 543 Y 543 (582)
T 1flg_A 543 Y 543 (582)
T ss_dssp E
T ss_pred E
Confidence 3
No 290
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.96 E-value=0.037 Score=60.31 Aligned_cols=151 Identities=9% Similarity=0.086 Sum_probs=92.3
Q ss_pred ccC-CCCEEEEEEC-CCcEEEEECCCCceeEEeeCCC--CCcEEEEEE-------ccCCCeEEEEEeCCC------eEEE
Q 008356 2 YNC-KDEHLASISL-SGDLILHNLASGAKAAELKDPN--EQVLRVLDY-------SRNSRHLLVTAGDDG------TLHL 64 (568)
Q Consensus 2 fSp-dG~~LasGs~-DG~V~VWDl~tg~~v~~l~~~h--~~~Vs~Laf-------spdg~~lLaTgs~DG------tV~V 64 (568)
|.| ++..|+++.. .+.|++.|++++.....+.... ......|+| ++++++++++-..++ .|.+
T Consensus 146 ~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~ 225 (496)
T 3kya_A 146 FDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYI 225 (496)
T ss_dssp EETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEE
T ss_pred EccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEE
Confidence 556 3455555544 4678889987766554443321 234788999 999984444443332 2666
Q ss_pred EECCC-CCce----eEEeccCCCCeEEEEEcC-CCCEEEEEeCCCeEEEEECC-------CCce-----------e-eEe
Q 008356 65 WDTTG-RSPK----VSWLKQHSAPTAGISFSS-DDKIIASVGLDKKLYTYDPG-------SRRP-----------S-SCI 119 (568)
Q Consensus 65 WDl~t-~~~~----v~~l~~H~~~VtslafsP-dg~~LaSgs~DGtV~IWDlr-------t~~~-----------v-~~~ 119 (568)
++... +... ...+... .....++++| ++.++++-..++.|..+|+. ++.. . ..+
T Consensus 226 i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~ 304 (496)
T 3kya_A 226 IKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLF 304 (496)
T ss_dssp EECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEE
T ss_pred EecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeE
Confidence 66433 1211 0122222 2356788999 56666667788899999987 5543 1 112
Q ss_pred --ecCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCC
Q 008356 120 --TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRG 153 (568)
Q Consensus 120 --~h~~~ItsLafsPdg~~LasGs-~DG~V~VWDlrt 153 (568)
........|+|+|+|++|+++. ....|+.++...
T Consensus 305 ~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg 341 (496)
T 3kya_A 305 TIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDE 341 (496)
T ss_dssp ECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred ecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCC
Confidence 3345578999999999655554 567899977654
No 291
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.80 E-value=0.033 Score=60.64 Aligned_cols=141 Identities=11% Similarity=0.063 Sum_probs=87.6
Q ss_pred EEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCCceeEEeccC----CCCeEEEEE-------cCCCCEEEEEeCCC----
Q 008356 40 LRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH----SAPTAGISF-------SSDDKIIASVGLDK---- 103 (568)
Q Consensus 40 Vs~Lafsp-dg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H----~~~Vtslaf-------sPdg~~LaSgs~DG---- 103 (568)
...|+|+| ++.+++++-...+.|++.|+.++. +..+..- ......++| ++++++|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~--v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM--LSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTE--EEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCE--EEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 45789998 355566665556778889988766 3333221 235899999 99998666665543
Q ss_pred ---eEEEEECCC-Ccee-----eEeecCCCeEEEEEecC-CCEEEEEEcCCeEEEEECC-------CCCC-----c----
Q 008356 104 ---KLYTYDPGS-RRPS-----SCITYEAPFSSLAFIDD-DWILTAGTSNGRVVFYDIR-------GKPQ-----P---- 157 (568)
Q Consensus 104 ---tV~IWDlrt-~~~v-----~~~~h~~~ItsLafsPd-g~~LasGs~DG~V~VWDlr-------t~~~-----~---- 157 (568)
.|.+++... +... ..+........++++|+ +.++++-..++.|..+|+. ++.. +
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred cCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 367776443 2221 23322334567889995 5555566678889999997 4432 0
Q ss_pred -eEEEeecCCCCCeeEEEEccCCCeE
Q 008356 158 -LTVLRACSSSEAVSSLCWQRAKPVF 182 (568)
Q Consensus 158 -v~~l~~~~h~~~VtsLafspdg~~L 182 (568)
...+-..+.....+.|+|+|+|++|
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~l 324 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYA 324 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEE
Confidence 1222222334557889999987643
No 292
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.79 E-value=0.18 Score=52.55 Aligned_cols=169 Identities=11% Similarity=0.082 Sum_probs=98.7
Q ss_pred CCCcEEEEECCC--Cce-eEEeeCC----CCCcEEEEEEcc--CCCeEEEEE-eC--CCeEEEEECCCCCce---eEEec
Q 008356 14 LSGDLILHNLAS--GAK-AAELKDP----NEQVLRVLDYSR--NSRHLLVTA-GD--DGTLHLWDTTGRSPK---VSWLK 78 (568)
Q Consensus 14 ~DG~V~VWDl~t--g~~-v~~l~~~----h~~~Vs~Lafsp--dg~~lLaTg-s~--DGtV~VWDl~t~~~~---v~~l~ 78 (568)
.+|.|.++|+.+ ++. ...+.+. ..-....|.+.+ ++...|+.+ .. +.+|.+|+++..... +..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 689999999873 232 1123321 122456677765 354334444 33 567888888543322 22222
Q ss_pred cC-CCCeEEEEEcCCCCEEEEEe-----------------CCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEE
Q 008356 79 QH-SAPTAGISFSSDDKIIASVG-----------------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAG 140 (568)
Q Consensus 79 ~H-~~~VtslafsPdg~~LaSgs-----------------~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasG 140 (568)
+. -...+++.+.++|.+.++.. ..|.|+.+|.. +.......-...+.++|+||++.|+++
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYva 238 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIA 238 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEE
Confidence 21 34589999999998777654 12566666653 333333444567899999999888876
Q ss_pred E-cCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEcc-CCCeEEEe
Q 008356 141 T-SNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQR-AKPVFIDE 185 (568)
Q Consensus 141 s-~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafsp-dg~~Las~ 185 (568)
. ..+.|..|+++..... ...+.+...+..-.+++++ +|.+.+++
T Consensus 239 dt~~~~I~~~~~~~~g~l-~~~~~~~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 239 ELLAHKIHVYEKHANWTL-TPLRVLSFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp EGGGTEEEEEEECTTSCE-EEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred eCCCCeEEEEEECCCCcE-ecCEEEeCCCCCceEEEeCCCCcEEEEe
Confidence 6 5788999999743222 1111112235567777777 46554433
No 293
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.77 E-value=0.042 Score=58.44 Aligned_cols=150 Identities=8% Similarity=-0.061 Sum_probs=92.2
Q ss_pred ccC-CCCEEEEEECCCcEEEEECCCCceeEE-eeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC--CCce-eEE
Q 008356 2 YNC-KDEHLASISLSGDLILHNLASGAKAAE-LKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG--RSPK-VSW 76 (568)
Q Consensus 2 fSp-dG~~LasGs~DG~V~VWDl~tg~~v~~-l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t--~~~~-v~~ 76 (568)
+++ +|++.++-..++.|+.+|..++..... +.......-..|+|+++++.++++-..++.|+.++.+. .... ...
T Consensus 235 vd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~ 314 (433)
T 4hw6_A 235 VHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYI 314 (433)
T ss_dssp ECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEE
T ss_pred EeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEE
Confidence 456 455444444567899999877765222 22222233346999999985566666778999988753 2100 111
Q ss_pred eccC---------------CCCeEEEEE---------cCCCCEEEEEeCCCeEEEEECCCCceeeEeec-----------
Q 008356 77 LKQH---------------SAPTAGISF---------SSDDKIIASVGLDKKLYTYDPGSRRPSSCITY----------- 121 (568)
Q Consensus 77 l~~H---------------~~~Vtslaf---------sPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h----------- 121 (568)
+.+. -.....+++ ..+++++++-...+.|+.+|. ++........
T Consensus 315 ~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG 393 (433)
T 4hw6_A 315 VCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDG 393 (433)
T ss_dssp EEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCE
T ss_pred EEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCC
Confidence 1111 123677899 667777777677889999985 4544333321
Q ss_pred -------CCCeEEEEEe-cCCCEEEEEEcCCeEEEEECC
Q 008356 122 -------EAPFSSLAFI-DDDWILTAGTSNGRVVFYDIR 152 (568)
Q Consensus 122 -------~~~ItsLafs-Pdg~~LasGs~DG~V~VWDlr 152 (568)
-.....|+++ +++.++++-..+++|+.++++
T Consensus 394 ~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 394 ELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp ETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred ccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 1236789999 566666666667788888764
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.69 E-value=0.29 Score=54.54 Aligned_cols=152 Identities=8% Similarity=-0.033 Sum_probs=96.7
Q ss_pred ccCCCCEEEEEEC-CCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC
Q 008356 2 YNCKDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH 80 (568)
Q Consensus 2 fSpdG~~LasGs~-DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H 80 (568)
|++.++.|+.... .+.|+.+++........+....-.....|++...+++++++-..++.|.+.++++.... ......
T Consensus 47 ~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~-~l~~~~ 125 (619)
T 3s94_A 47 FVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VLFWQE 125 (619)
T ss_dssp EETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEECSS
T ss_pred EEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE-EEEeCC
Confidence 4565666665554 46677777654322222222122456789999877767777778899999999876532 223344
Q ss_pred CCCeEEEEEcCCCCEEEEEeC--CCeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEEEE-cCCeEEEEECCCC
Q 008356 81 SAPTAGISFSSDDKIIASVGL--DKKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTAGT-SNGRVVFYDIRGK 154 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~--DGtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~LasGs-~DG~V~VWDlrt~ 154 (568)
......|++.|.+.+|+.... .+.|...++......... ..-.....|++++++..|+.+. ..+.|..+|++..
T Consensus 126 l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 126 LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp CSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCC
T ss_pred CCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC
Confidence 556789999996555554442 467888887654443333 2445688999999766666654 5678999998864
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.66 E-value=0.0066 Score=68.85 Aligned_cols=151 Identities=10% Similarity=-0.026 Sum_probs=89.2
Q ss_pred ccCCCCEEEEEE-CCCcEEEEECCC----CceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEE
Q 008356 2 YNCKDEHLASIS-LSGDLILHNLAS----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSW 76 (568)
Q Consensus 2 fSpdG~~LasGs-~DG~V~VWDl~t----g~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~ 76 (568)
|.+.++.|+... ..+.|+.+++.. ......+.. .......|++.+.+.+++++-...+.|.++++.+... ...
T Consensus 413 ~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~-~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~-~~l 490 (699)
T 1n7d_A 413 TEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR-KTL 490 (699)
T ss_dssp EETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS-CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCE-EEE
T ss_pred cccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC-CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCce-EEE
Confidence 455556666554 346788888754 122212211 1122345777765555666666778999999887652 222
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEe-CC-CeEEEEECCCCceeeEe-ecCCCeEEEEEecCCCEEEE-EEcCCeEEEEECC
Q 008356 77 LKQHSAPTAGISFSSDDKIIASVG-LD-KKLYTYDPGSRRPSSCI-TYEAPFSSLAFIDDDWILTA-GTSNGRVVFYDIR 152 (568)
Q Consensus 77 l~~H~~~VtslafsPdg~~LaSgs-~D-GtV~IWDlrt~~~v~~~-~h~~~ItsLafsPdg~~Las-Gs~DG~V~VWDlr 152 (568)
+.........|++.|.+.+|+... .. +.|.++++........+ ..-.....|+|++++..|+. -...+.|.++|+.
T Consensus 491 ~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 491 FREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp CCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred EeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 333334568899999555444443 22 67888887643332222 22345678999987555554 4467789999997
Q ss_pred CC
Q 008356 153 GK 154 (568)
Q Consensus 153 t~ 154 (568)
..
T Consensus 571 G~ 572 (699)
T 1n7d_A 571 GG 572 (699)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 296
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.65 E-value=0.11 Score=58.82 Aligned_cols=180 Identities=12% Similarity=0.050 Sum_probs=108.8
Q ss_pred EEEEEECCCcEEEEECCCCceeEEee---CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec---cCC
Q 008356 8 HLASISLSGDLILHNLASGAKAAELK---DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK---QHS 81 (568)
Q Consensus 8 ~LasGs~DG~V~VWDl~tg~~v~~l~---~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~---~H~ 81 (568)
.|.+|..++-|.+||..+++.. .+. ......|.++...+++. |..|..++-|..||..++. ...+. ...
T Consensus 375 ~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~~ 449 (781)
T 3v9f_A 375 KLWIGTDGGGINVFENGKRVAI-YNKENRELLSNSVLCSLKDSEGN--LWFGTYLGNISYYNTRLKK--FQIIELEKNEL 449 (781)
T ss_dssp CEEEEEBSSCEEEEETTEEEEE-CC-----CCCSBEEEEEECTTSC--EEEEETTEEEEEECSSSCE--EEECCSTTTCC
T ss_pred CEEEEeCCCcEEEEECCCCeEE-EccCCCCCCCcceEEEEECCCCC--EEEEeccCCEEEEcCCCCc--EEEeccCCCCC
Confidence 3556666666888887544322 111 11345788888887775 6667877778889887654 33332 234
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeec------CCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCC
Q 008356 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY------EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKP 155 (568)
Q Consensus 82 ~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h------~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~ 155 (568)
..|.++...+++++.+ +.. +-|.+||..+++....... ...|.++...++|++. +|+.++-|..||.++..
T Consensus 450 ~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 450 LDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFW-IGTFGGGVGIYTPDMQL 526 (781)
T ss_dssp CCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEE-EEESSSCEEEECTTCCE
T ss_pred CeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEE-EEEcCCCEEEEeCCCCe
Confidence 6799998887776544 455 5599999887665433321 3578999998888755 45554447888887652
Q ss_pred CceEEEeec--CCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 156 QPLTVLRAC--SSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 156 ~~v~~l~~~--~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
...+... -....|.++...++|.+ .++.. +|.|..||...
T Consensus 527 --~~~~~~~~~l~~~~i~~i~~d~~g~l------------Wi~T~-~Glv~~~d~~~ 568 (781)
T 3v9f_A 527 --VRKFNQYEGFCSNTINQIYRSSKGQM------------WLATG-EGLVCFPSARN 568 (781)
T ss_dssp --EEEECTTTTCSCSCEEEEEECTTSCE------------EEEET-TEEEEESCTTT
T ss_pred --EEEccCCCCCCCCeeEEEEECCCCCE------------EEEEC-CCceEEECCCC
Confidence 2222210 11345777777665443 23322 45447777653
No 297
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.60 E-value=0.41 Score=48.32 Aligned_cols=147 Identities=14% Similarity=0.182 Sum_probs=81.8
Q ss_pred CceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEE-EECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCe
Q 008356 26 GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHL-WDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKK 104 (568)
Q Consensus 26 g~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~V-WDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGt 104 (568)
|+.-..+.......+..+.+.+++. +++.+ .+|.++. +|-....- ...-......+..+.+.+++..+ .++.+|.
T Consensus 151 G~tW~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~G~~~~S~d~gG~tW-~~~~~~~~~~~~~~~~~~~g~~~-~~~~~G~ 226 (327)
T 2xbg_A 151 GKNWQALVQEAIGVMRNLNRSPSGE-YVAVS-SRGSFYSTWEPGQTAW-EPHNRTTSRRLHNMGFTPDGRLW-MIVNGGK 226 (327)
T ss_dssp TSSEEEEECSCCCCEEEEEECTTSC-EEEEE-TTSSEEEEECTTCSSC-EEEECCSSSCEEEEEECTTSCEE-EEETTTE
T ss_pred CCCCEEeecCCCcceEEEEEcCCCc-EEEEE-CCCcEEEEeCCCCCce-eECCCCCCCccceeEECCCCCEE-EEeCCce
Confidence 4433334333455678899999876 55554 4555444 33212221 11123445678999999887655 5566788
Q ss_pred EEEEECCCCceeeEee-----cCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEEeec-CCCCCeeEEEEccC
Q 008356 105 LYTYDPGSRRPSSCIT-----YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVLRAC-SSSEAVSSLCWQRA 178 (568)
Q Consensus 105 V~IWDlrt~~~v~~~~-----h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l~~~-~h~~~VtsLafspd 178 (568)
+++.+...++.-..+. ....+.++++.+++.+++++. +|.| ++..+.+. ....+... .....+.++.|.++
T Consensus 227 ~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~-tW~~~~~~~~~~~~~~~v~~~~~ 303 (327)
T 2xbg_A 227 IAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQ-TWQQDVDVKKVPSNFYKILFFSP 303 (327)
T ss_dssp EEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTS-SCEECGGGTTSSSCCCEEEEEET
T ss_pred EEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCc-ccEEcCccCCCCCCeEEEEEECC
Confidence 8777533233222121 223588999998877766654 6766 44555442 33333311 23356778888654
Q ss_pred C
Q 008356 179 K 179 (568)
Q Consensus 179 g 179 (568)
+
T Consensus 304 ~ 304 (327)
T 2xbg_A 304 D 304 (327)
T ss_dssp T
T ss_pred C
Confidence 3
No 298
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.56 E-value=0.071 Score=63.87 Aligned_cols=179 Identities=8% Similarity=0.055 Sum_probs=112.6
Q ss_pred CcEEEEECCCCceeEEeeCCCCCcEEEEEEc---cCCCeEEEEEe----------CCCeEEEEECCCCCceeEEeccCCC
Q 008356 16 GDLILHNLASGAKAAELKDPNEQVLRVLDYS---RNSRHLLVTAG----------DDGTLHLWDTTGRSPKVSWLKQHSA 82 (568)
Q Consensus 16 G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafs---pdg~~lLaTgs----------~DGtV~VWDl~t~~~~v~~l~~H~~ 82 (568)
+.|++.|..+.+.+..+.-...+.+.+++.. .+.+.+|+.|. ..|.|++|++...+..........+
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g 886 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKG 886 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESS
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCC
Confidence 4689999888888877766566666666643 33334787775 3478999999755433333344578
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeE-eecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCceEEE
Q 008356 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSC-ITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPLTVL 161 (568)
Q Consensus 83 ~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~-~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v~~l 161 (568)
.|++++-- +|++++.. ..+|++||+...+.+.. ..+...|..+...-.++++++|..-..|.++..+.....+..+
T Consensus 887 ~v~al~~~-~g~Lla~i--g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~ 963 (1158)
T 3ei3_A 887 AVYSMVEF-NGKLLASI--NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEI 963 (1158)
T ss_dssp CEEEEEEE-TTEEEEEE--TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEEEE
T ss_pred cCEEEeee-CCEEEEEc--CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEEEE
Confidence 89888754 45444433 47899999987654442 1222223333343457899999987778776655444444555
Q ss_pred eecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 162 RACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 162 ~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
....+..+++++.+-.++ .++.+..++.+.+....+
T Consensus 964 a~D~~~~~vta~~~ld~~-------------t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 964 ARDFNPNWMSAVEILDDD-------------NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EECCSCBCEEEEEEEETT-------------EEEEEETTSEEEEEEECT
T ss_pred EeecccccEEEEEEEccC-------------cEEEEcCCCcEEEEecCC
Confidence 444566788888876432 344455677777776544
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.51 E-value=0.0039 Score=70.69 Aligned_cols=180 Identities=7% Similarity=-0.059 Sum_probs=106.1
Q ss_pred CCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCC---CceeEEeccCCCCeEEEEEc
Q 008356 14 LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR---SPKVSWLKQHSAPTAGISFS 90 (568)
Q Consensus 14 ~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~---~~~v~~l~~H~~~Vtslafs 90 (568)
..+.|++.++...+....+.. ...+..|+|.+.+..++++-...+.|+.+++.+. ......+.........|++.
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~--~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD 461 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPN--LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 461 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCC--CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECC
T ss_pred CccceEEEeCCCCcceeeecc--CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEE
Confidence 345678888766554433332 2334568999877655565556789999998751 11122222222345678888
Q ss_pred C-CCCEEEEEeCCCeEEEEECCCCceeeEee-cCCCeEEEEEecCCCEEEEEEc--CCeEEEEECCCCCCceEEEeecCC
Q 008356 91 S-DDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTS--NGRVVFYDIRGKPQPLTVLRACSS 166 (568)
Q Consensus 91 P-dg~~LaSgs~DGtV~IWDlrt~~~v~~~~-h~~~ItsLafsPdg~~LasGs~--DG~V~VWDlrt~~~~v~~l~~~~h 166 (568)
+ .++++++-...+.|.++|+........+. .......|+++|.+.+|+.... .+.|.++++..... ..+.. ..
T Consensus 462 ~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~--~~l~~-~~ 538 (699)
T 1n7d_A 462 WIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI--YSLVT-EN 538 (699)
T ss_dssp CSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC--CEESC-SS
T ss_pred eeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe--eEEEe-CC
Confidence 6 44555555567889999987655444443 2345678899996655555432 37888888876432 22211 12
Q ss_pred CCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCC
Q 008356 167 SEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPL 209 (568)
Q Consensus 167 ~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr 209 (568)
......|+|++++.. ++++-...+.|.++|+.
T Consensus 539 l~~PnGlavd~~~~~-----------LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 539 IQWPNGITLDLLSGR-----------LYWVDSKLHSISSIDVN 570 (699)
T ss_dssp CSSCCCEEECTTTCC-----------EEEEETTTTEEEEECSS
T ss_pred CCCccEEEEeccCCE-----------EEEEecCCCeEEEEccC
Confidence 345678899886433 34444556677777764
No 300
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.49 E-value=0.19 Score=56.87 Aligned_cols=169 Identities=10% Similarity=0.063 Sum_probs=103.2
Q ss_pred EEEEEECCCcEEEEECCCCceeEEeeC--CCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC-----
Q 008356 8 HLASISLSGDLILHNLASGAKAAELKD--PNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH----- 80 (568)
Q Consensus 8 ~LasGs~DG~V~VWDl~tg~~v~~l~~--~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H----- 80 (568)
.|.+|..++-|..+|..+++.. .+.. .....|.++...+++. |..|.. +-|.+||..+..... .....
T Consensus 419 ~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~--lwigt~-~Gl~~~~~~~~~~~~-~~~~~~~~~~ 493 (781)
T 3v9f_A 419 NLWFGTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKK--IWIGTH-AGVFVIDLASKKVIH-HYDTSNSQLL 493 (781)
T ss_dssp CEEEEETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSE--EEEEET-TEEEEEESSSSSCCE-EECTTTSSCS
T ss_pred CEEEEeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCC--EEEEEC-CceEEEeCCCCeEEe-cccCcccccc
Confidence 3455666667888887666533 3321 1345788888887765 555666 558889987655222 11111
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee----cCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCC
Q 008356 81 SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT----YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQ 156 (568)
Q Consensus 81 ~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~----h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~ 156 (568)
...|.++...+++++.+.....| |..||..+++...... ....|.++...++|.+.+ ++.+|.|..||.++..
T Consensus 494 ~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-~T~~Glv~~~d~~~~~- 570 (781)
T 3v9f_A 494 ENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWL-ATGEGLVCFPSARNFD- 570 (781)
T ss_dssp CSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEE-EETTEEEEESCTTTCC-
T ss_pred cceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEE-EECCCceEEECCCCCc-
Confidence 36799999988887655443345 8889987765433221 234688999888887544 5556665889987653
Q ss_pred ceEEEeec-C-CCCCeeEEEEccCCCeEEEe
Q 008356 157 PLTVLRAC-S-SSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 157 ~v~~l~~~-~-h~~~VtsLafspdg~~Las~ 185 (568)
...+... + ....|.++...++|.+.+..
T Consensus 571 -~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 571 -YQVFQRKEGLPNTHIRAISEDKNGNIWAST 600 (781)
T ss_dssp -CEEECGGGTCSCCCCCEEEECSSSCEEEEC
T ss_pred -EEEccccCCCCCceEEEEEECCCCCEEEEc
Confidence 2333211 1 12357788877766554443
No 301
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.13 E-value=0.28 Score=52.41 Aligned_cols=141 Identities=13% Similarity=0.119 Sum_probs=91.7
Q ss_pred CCCEEEEEECCCcEEEEECCCCceeEEeeCCC---CCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC----------
Q 008356 5 KDEHLASISLSGDLILHNLASGAKAAELKDPN---EQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS---------- 71 (568)
Q Consensus 5 dG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h---~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~---------- 71 (568)
+|..|+++ .++.||.-++......+.++..+ ...+..+..+|+|+ +|+.. .+..|.|-.+..+.
T Consensus 31 n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~-lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 31 NGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGD-LLCLF-NDNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSS-EEEEE-CSSEEEEEECCTTCSCCCCHHHHH
T ss_pred CCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCC-EEEEe-cCCeEEEEEecCccccCccccccc
Confidence 44444444 34677777776554555555432 22456699999998 56655 44688888886221
Q ss_pred -ceeEEecc------CCCCeEEEEEcC---CCCEEEEEeCCCeEEEEECCCC--ceeeEe-------e---cCCCeEEEE
Q 008356 72 -PKVSWLKQ------HSAPTAGISFSS---DDKIIASVGLDKKLYTYDPGSR--RPSSCI-------T---YEAPFSSLA 129 (568)
Q Consensus 72 -~~v~~l~~------H~~~VtslafsP---dg~~LaSgs~DGtV~IWDlrt~--~~v~~~-------~---h~~~ItsLa 129 (568)
.....+.- ...+|..+.|+| .+..|++-..|++|++||+... ++. .+ + ....|.+++
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEE
Confidence 11112221 246799999999 5678999999999999999862 222 22 1 225688899
Q ss_pred EecCCCEEEEEE--cCCeEEEE
Q 008356 130 FIDDDWILTAGT--SNGRVVFY 149 (568)
Q Consensus 130 fsPdg~~LasGs--~DG~V~VW 149 (568)
|..++-.|.+.+ ..|.|+-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 988777677655 66777654
No 302
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.06 E-value=0.46 Score=49.17 Aligned_cols=200 Identities=11% Similarity=0.126 Sum_probs=116.3
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC-
Q 008356 3 NCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS- 81 (568)
Q Consensus 3 SpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~- 81 (568)
||..+.||.-. ...++|||+++...++.+.- .++.+. =+|-.+. .|+-... ..|+-|++.+...+++.+..|.
T Consensus 75 nP~~~ViALra-g~~LQiFnletK~klks~~~-~e~Vvf-WkWis~~--~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~ 148 (365)
T 2xzh_A 75 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTF-WKWISLN--TVALVTD-NAVYHWSMEGESQPVKMFDRHSS 148 (365)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEE-EEECSSS--EEEEEES-SEEEEEESSTTCCCEEEEECCGG
T ss_pred CCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEE-EEecCCC--eEEEEcC-CcEEEEcccCCCCCceeeecchh
Confidence 67888887765 67899999999999888874 344444 5787654 3544443 6799999987666677776663
Q ss_pred ---CCeEEEEEcCCCCEEEEEeC-------CCeEEEEECCCCceeeEeecCCCeEEEEEecC---CCEEEEEEc---CCe
Q 008356 82 ---APTAGISFSSDDKIIASVGL-------DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDD---DWILTAGTS---NGR 145 (568)
Q Consensus 82 ---~~VtslafsPdg~~LaSgs~-------DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPd---g~~LasGs~---DG~ 145 (568)
..|..-..+++.++++..+- .|.+.+|..+.+.....-+|......+.+.-+ .++++.+.. .++
T Consensus 149 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 228 (365)
T 2xzh_A 149 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 228 (365)
T ss_dssp GTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEE
T ss_pred cccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 45777777888998876652 35788888876654433344433332222211 123333333 258
Q ss_pred EEEEECCCCCCceEEEeecCCCCCeeEEEEccC--CCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 146 VVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRA--KPVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 146 V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspd--g~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
++|-++........ .-......+-|.|+ ..+-+.-.-+....+++--+.-|.|.+||+....+
T Consensus 229 LhIiEi~~~~~~~~-----~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~ 293 (365)
T 2xzh_A 229 LHIIEVGTPPTGNQ-----PFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC 293 (365)
T ss_dssp EEEEECSSCCTTCC-----CCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred EEEEEcCCCCCCCC-----CcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcE
Confidence 99999854310000 01111223333332 11111111111223344445589999999988665
No 303
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.98 E-value=0.25 Score=49.94 Aligned_cols=176 Identities=13% Similarity=0.075 Sum_probs=101.6
Q ss_pred ccCCCCEEEEEECC--------------CcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEE---eCCCeEEE
Q 008356 2 YNCKDEHLASISLS--------------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTA---GDDGTLHL 64 (568)
Q Consensus 2 fSpdG~~LasGs~D--------------G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTg---s~DGtV~V 64 (568)
++++|++|+..... ..|+..++..++.. .+.. ... ..|+++++.++++- ..+..|+.
T Consensus 60 i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~-~l~~---~~~--~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 60 INADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST-VLDP---DPC--IYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE-EEEC---SCE--EEEEEETTEEEEEEESSSSCEEEEE
T ss_pred EEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce-Eeec---CCc--cEEEEeCCEEEEEeecCCCCceEEE
Confidence 46788888877543 36777777655433 3332 122 25677888555554 23445666
Q ss_pred EECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeC-CCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEcC
Q 008356 65 WDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGL-DKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTSN 143 (568)
Q Consensus 65 WDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~-DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~D 143 (568)
.++++.. ...+..+.. ..|+++++.|+-.+. ...|.+.++..+....++. +... ..+.|++.+|+-...+
T Consensus 134 ~~~dGs~--~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~~~~-~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 134 IRIDGEE--KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--CNCY-KPVVLDDTNVYYMDVN 204 (302)
T ss_dssp EETTSCC--CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC--SCEE-EEEEEETTEEEEEEGG
T ss_pred EECCCCC--eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC--CCcc-ceeeecCCEEEEEEcC
Confidence 6666554 333444432 345677888876665 6789999988776554443 2332 3466888888877654
Q ss_pred --CeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCC
Q 008356 144 --GRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGD 201 (568)
Q Consensus 144 --G~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg 201 (568)
..|..-++++... ..+. ...+ ..|+|++.+|..+... ....|.....||
T Consensus 205 ~~~~I~~~~ldG~~~--~~Lt----~~~~--~~~~~~g~~Iy~~~~~-~~~~i~~~~~DG 255 (302)
T 3s25_A 205 RDNAIVHVNINNPNP--VVLT----EANI--EHYNVYGSLIFYQRGG-DNPALCVVKNDG 255 (302)
T ss_dssp GTTEEEEECSSSCCC--EECS----CSCE--EEEEEETTEEEEEECS-SSCEEEEEETTS
T ss_pred CCcEEEEEECCCCCe--EEEe----CCCc--ceEEECCCEEEEEECC-CCcEEEEEECCC
Confidence 3677777776542 3332 1223 3478888887655222 223444444454
No 304
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.98 E-value=0.42 Score=49.68 Aligned_cols=138 Identities=15% Similarity=0.271 Sum_probs=91.1
Q ss_pred CCcEEEEEC--CCCceeEEeeC---C--CC-CcEEEEEE--ccC-CCeEEEEEeCCCeEEEEECCC---CC---ceeEEe
Q 008356 15 SGDLILHNL--ASGAKAAELKD---P--NE-QVLRVLDY--SRN-SRHLLVTAGDDGTLHLWDTTG---RS---PKVSWL 77 (568)
Q Consensus 15 DG~V~VWDl--~tg~~v~~l~~---~--h~-~~Vs~Laf--spd-g~~lLaTgs~DGtV~VWDl~t---~~---~~v~~l 77 (568)
+++|.+|++ .++. +..+.. . .. ..+..+|+ ++. ++.++++...+|.+..|++.. +. ..++.+
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 478999976 3443 444421 1 11 34555677 664 444678888899999999932 21 124444
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECC-----CCceeeEee---cCCCeEEEEEe--cCCC-EEEEEE-cCCe
Q 008356 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPG-----SRRPSSCIT---YEAPFSSLAFI--DDDW-ILTAGT-SNGR 145 (568)
Q Consensus 78 ~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlr-----t~~~v~~~~---h~~~ItsLafs--Pdg~-~LasGs-~DG~ 145 (568)
.. ...+..+...+....|+.+-++.-|..||.+ +++.+..+. ....+..|++- ++++ +|++.+ .+..
T Consensus 177 ~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s 255 (355)
T 3amr_A 177 KM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSS 255 (355)
T ss_dssp EC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTE
T ss_pred cC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCE
Confidence 43 4578899999988899999999888888865 344555543 23468888885 4455 566555 6789
Q ss_pred EEEEECCCC
Q 008356 146 VVFYDIRGK 154 (568)
Q Consensus 146 V~VWDlrt~ 154 (568)
+.|||.+..
T Consensus 256 ~~Vydr~~~ 264 (355)
T 3amr_A 256 YAIYDRQGK 264 (355)
T ss_dssp EEEEESSTT
T ss_pred EEEEECCCC
Confidence 999999743
No 305
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=95.93 E-value=0.29 Score=50.91 Aligned_cols=161 Identities=14% Similarity=0.175 Sum_probs=97.4
Q ss_pred CCcEEEEECCCC-c---eeEEeeCCCCCcEEEEEEccCCCeEEEEEe-----------------CCCeEEEEECCCCCce
Q 008356 15 SGDLILHNLASG-A---KAAELKDPNEQVLRVLDYSRNSRHLLVTAG-----------------DDGTLHLWDTTGRSPK 73 (568)
Q Consensus 15 DG~V~VWDl~tg-~---~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs-----------------~DGtV~VWDl~t~~~~ 73 (568)
+..|.||++..+ . .+..+.+..-...+++.+.++|. ++++.. ..|.|+.||. ++
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-- 212 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-- 212 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC--
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce--
Confidence 456778776543 2 23445543445678999999987 555543 1244555544 33
Q ss_pred eEEeccCCCCeEEEEEcCCCCEEEEEe-CCCeEEEEECCC-Cce--eeEeecCCCeEEEEEec-CCCEEEEEEcC-CeEE
Q 008356 74 VSWLKQHSAPTAGISFSSDDKIIASVG-LDKKLYTYDPGS-RRP--SSCITYEAPFSSLAFID-DDWILTAGTSN-GRVV 147 (568)
Q Consensus 74 v~~l~~H~~~VtslafsPdg~~LaSgs-~DGtV~IWDlrt-~~~--v~~~~h~~~ItsLafsP-dg~~LasGs~D-G~V~ 147 (568)
++.+...-...+.++|+||++.|+.+. ..+.|..||+.. ++. ...+...+....+++.+ +|++.+++..+ +.|.
T Consensus 213 ~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~g~~v~ 292 (355)
T 3sre_A 213 VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPNGMRIF 292 (355)
T ss_dssp CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESCHHHHH
T ss_pred EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCCceEEE
Confidence 333333445689999999998877665 578999999864 332 22344456778899999 59988877644 4566
Q ss_pred EEECCCCCCceEEEeec---CCCCCeeEEEEccCCCeE
Q 008356 148 FYDIRGKPQPLTVLRAC---SSSEAVSSLCWQRAKPVF 182 (568)
Q Consensus 148 VWDlrt~~~~v~~l~~~---~h~~~VtsLafspdg~~L 182 (568)
.||.+.. .+..+++.. +....|..+ |..+|+.+
T Consensus 293 ~~~P~~~-~~s~v~rI~~~~~~~~~v~~v-~~ddG~~l 328 (355)
T 3sre_A 293 FYDAENP-PGSEVLRIQDILSEEPKVTVV-YAENGTVL 328 (355)
T ss_dssp SCCTTSC-CCEEEEEEECTTSSSCEEEEE-EEECSSSC
T ss_pred EECCCCC-CCCEEEEEEccCCCCcEEEEE-EEcCCCEE
Confidence 6776632 233333321 123344444 56677764
No 306
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.67 E-value=0.84 Score=46.71 Aligned_cols=139 Identities=13% Similarity=0.117 Sum_probs=78.7
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCcee--EEee--CCCCCcEEEEEEccC---CCeEEEEEeCC-----CeEEEEECC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKA--AELK--DPNEQVLRVLDYSRN---SRHLLVTAGDD-----GTLHLWDTT 68 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v--~~l~--~~h~~~Vs~Lafspd---g~~lLaTgs~D-----GtV~VWDl~ 68 (568)
+|.|+|++ +++..+|.|++++ +++.. ..+. .........|+|+|+ +..++++-..+ +.|..|+..
T Consensus 37 a~~pdG~l-~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~ 113 (352)
T 2ism_A 37 AFLPDGGM-LIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHL 113 (352)
T ss_dssp EECTTSCE-EEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEEEEC
T ss_pred EEcCCCeE-EEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEEEeC
Confidence 36789984 4556779999998 44422 1121 112345788999998 55455554433 678888876
Q ss_pred CCC-----ceeEEec---cCCCCeEEEEEcCCCCEEEEEeC-------------CCeEEEEECCCC------------ce
Q 008356 69 GRS-----PKVSWLK---QHSAPTAGISFSSDDKIIASVGL-------------DKKLYTYDPGSR------------RP 115 (568)
Q Consensus 69 t~~-----~~v~~l~---~H~~~VtslafsPdg~~LaSgs~-------------DGtV~IWDlrt~------------~~ 115 (568)
... ..+..+. ........++|.|++.++++.+. .++|.-+|.... ..
T Consensus 114 ~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~ 193 (352)
T 2ism_A 114 GERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGAR 193 (352)
T ss_dssp SSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSC
T ss_pred CCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCC
Confidence 432 1111122 11223468999999987776542 256777766531 01
Q ss_pred eeEeec-CCCeEEEEEec-CCCEEEEEEc
Q 008356 116 SSCITY-EAPFSSLAFID-DDWILTAGTS 142 (568)
Q Consensus 116 v~~~~h-~~~ItsLafsP-dg~~LasGs~ 142 (568)
...+.. -.....++|+| +++++++-..
T Consensus 194 ~~i~a~G~rnp~g~a~d~~~g~l~v~d~g 222 (352)
T 2ism_A 194 PEVYSLGHRNPQGLAWHPKTGELFSSEHG 222 (352)
T ss_dssp TTEEEECCSEECCCEECTTTCCEEEEEEC
T ss_pred ccEEEEcCCCcccEEEECCCCCEEEEEcC
Confidence 112211 12356789999 6666555443
No 307
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.56 E-value=0.45 Score=48.74 Aligned_cols=178 Identities=13% Similarity=0.150 Sum_probs=93.1
Q ss_pred ccCC---CCEEEEEECC------CcEEEEECCCCc-----ee-EEee--CCCCCcEEEEEEccCCCeEEEEEeC------
Q 008356 2 YNCK---DEHLASISLS------GDLILHNLASGA-----KA-AELK--DPNEQVLRVLDYSRNSRHLLVTAGD------ 58 (568)
Q Consensus 2 fSpd---G~~LasGs~D------G~V~VWDl~tg~-----~v-~~l~--~~h~~~Vs~Lafspdg~~lLaTgs~------ 58 (568)
|+|+ +..|+++... +.|..|+...++ .+ ..+. .........|+|.|+|. ++++.++
T Consensus 82 ~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~ 160 (352)
T 2ism_A 82 LHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYEREL 160 (352)
T ss_dssp ECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGG
T ss_pred ECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCcc
Confidence 5666 5555555432 578888876432 11 1132 11111224689999996 5555432
Q ss_pred -------CCeEEEEECCCCC------------ceeEEeccCCCCeEEEEEcC-CCCEEEEEeCCCe--------EEEEEC
Q 008356 59 -------DGTLHLWDTTGRS------------PKVSWLKQHSAPTAGISFSS-DDKIIASVGLDKK--------LYTYDP 110 (568)
Q Consensus 59 -------DGtV~VWDl~t~~------------~~v~~l~~H~~~VtslafsP-dg~~LaSgs~DGt--------V~IWDl 110 (568)
.|.|.-+|.++.- .......+|. ....++|+| +++++++-..... |.+..-
T Consensus 161 ~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~ 239 (352)
T 2ism_A 161 AQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVP 239 (352)
T ss_dssp GGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECT
T ss_pred ccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEecc
Confidence 2566666665410 0111223333 367789999 6665555433332 333321
Q ss_pred CC----------------CceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCc------eEEEeecCCCC
Q 008356 111 GS----------------RRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQP------LTVLRACSSSE 168 (568)
Q Consensus 111 rt----------------~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~------v~~l~~~~h~~ 168 (568)
.. ..++..+........++| .+|.++++.-..+.|...+++..... ...+ ....
T Consensus 240 G~nyGwp~~~g~~~~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~---~~~~ 315 (352)
T 2ism_A 240 GGNYGWPRVVGRGNDPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETAL---SGFG 315 (352)
T ss_dssp TCBCCTTTCCSCCCCTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEE---ESSC
T ss_pred CCcCCCCcccCCCCCCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheec---ccCC
Confidence 11 012222222334567777 46666666666778888887754321 1222 2235
Q ss_pred CeeEEEEccCCCeEEEe
Q 008356 169 AVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 169 ~VtsLafspdg~~Las~ 185 (568)
.+..+++.|+|...++.
T Consensus 316 rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 316 RLREVQVGPDGALYVTT 332 (352)
T ss_dssp CEEEEEECTTSCEEEEE
T ss_pred CeeEEEECCCCcEEEEE
Confidence 78899999988665554
No 308
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.45 E-value=0.41 Score=48.33 Aligned_cols=143 Identities=11% Similarity=0.070 Sum_probs=81.5
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec---
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK--- 78 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~--- 78 (568)
+.+++++++++ .+|.|+.-+-..++.-..+.......+..+.+.+++. ++.++.+|.+++++.+.++ ....+.
T Consensus 170 ~~~~~~~~~~g-~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~--~~~~~~~G~~~~s~~D~G~-tW~~~~~~~ 245 (327)
T 2xbg_A 170 RSPSGEYVAVS-SRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR--LWMIVNGGKIAFSDPDNSE-NWGELLSPL 245 (327)
T ss_dssp ECTTSCEEEEE-TTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC--EEEEETTTEEEEEETTEEE-EECCCBCTT
T ss_pred EcCCCcEEEEE-CCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCC--EEEEeCCceEEEecCCCCC-eeEeccCCc
Confidence 45666666555 4555544321113332333333455678888988876 4456678888887533222 011111
Q ss_pred -cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee----cCCCeEEEEEecCCCEEEEEEcCCeEEEEEC
Q 008356 79 -QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT----YEAPFSSLAFIDDDWILTAGTSNGRVVFYDI 151 (568)
Q Consensus 79 -~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~----h~~~ItsLafsPdg~~LasGs~DG~V~VWDl 151 (568)
.+...+.++.+.+++..++.+ .++.| ++....++.-..+. ....+.++.|.+++ .+++++.+|.|.-++-
T Consensus 246 ~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 246 RRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYVT 320 (327)
T ss_dssp SSCCSCEEEEEESSSSCEEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEECC
T ss_pred ccCCcceEEEEecCCCEEEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEcC
Confidence 122458899999877766654 46766 34444444333332 24568889887554 4666677898877764
No 309
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.40 E-value=0.6 Score=45.74 Aligned_cols=141 Identities=16% Similarity=0.178 Sum_probs=76.2
Q ss_pred CCCEEEEEECC-----CcEEEEECCCCc---eeE--EeeCCCCCcEEEEEEccCCCeEEEEEeCC-----CeEEEEECCC
Q 008356 5 KDEHLASISLS-----GDLILHNLASGA---KAA--ELKDPNEQVLRVLDYSRNSRHLLVTAGDD-----GTLHLWDTTG 69 (568)
Q Consensus 5 dG~~LasGs~D-----G~V~VWDl~tg~---~v~--~l~~~h~~~Vs~Lafspdg~~lLaTgs~D-----GtV~VWDl~t 69 (568)
++++++.|+.+ ..+.+||+.+.+ -.. .+... .....++.+ ++ .+++.|+.+ ..+.+||..+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~-r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~d~~~ 137 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR-RGLAGATTL--GD-MIYVSGGFDGSRRHTSMERYDPNI 137 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC-CBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEETTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC-ccceeEEEE--CC-EEEEEcccCCCcccceEEEEcCCC
Confidence 45566677754 468999987765 222 22211 111122222 44 477777654 3588999877
Q ss_pred CCceeEEecc--CCCCeEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCceeeEee--cCC-CeEEEEEecCCCEEEE
Q 008356 70 RSPKVSWLKQ--HSAPTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCIT--YEA-PFSSLAFIDDDWILTA 139 (568)
Q Consensus 70 ~~~~v~~l~~--H~~~VtslafsPdg~~LaSgs~D-----GtV~IWDlrt~~~v~~~~--h~~-~ItsLafsPdg~~Las 139 (568)
..- ..+.. ....-.+++.. ++++++.|+.+ ..+.+||+.+.+-...-. ... ...++.+ ++++++.
T Consensus 138 ~~W--~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~ 212 (301)
T 2vpj_A 138 DQW--SMLGDMQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVV 212 (301)
T ss_dssp TEE--EEEEECSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE
T ss_pred CeE--EECCCCCCCcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEE
Confidence 652 22211 11111122222 67777777754 358999998875433321 111 1222222 5677777
Q ss_pred EEcC-----CeEEEEECCCC
Q 008356 140 GTSN-----GRVVFYDIRGK 154 (568)
Q Consensus 140 Gs~D-----G~V~VWDlrt~ 154 (568)
|+.+ ..|.+||+++.
T Consensus 213 GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 213 GGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp CCBCSSSBCCCEEEEETTTT
T ss_pred eCCCCCcccceEEEEeCCCC
Confidence 7764 46899999875
No 310
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.24 E-value=0.54 Score=46.18 Aligned_cols=143 Identities=11% Similarity=0.134 Sum_probs=74.6
Q ss_pred CCCEEEEEECC-----CcEEEEECCCCceeEEeeCCC-CCcEEEEEEccCCCeEEEEEeCCC-----eEEEEECCCCCce
Q 008356 5 KDEHLASISLS-----GDLILHNLASGAKAAELKDPN-EQVLRVLDYSRNSRHLLVTAGDDG-----TLHLWDTTGRSPK 73 (568)
Q Consensus 5 dG~~LasGs~D-----G~V~VWDl~tg~~v~~l~~~h-~~~Vs~Lafspdg~~lLaTgs~DG-----tV~VWDl~t~~~~ 73 (568)
++++++.|+.+ ..+.+||..+.+-...-.... ......+.+ ++ .+++.|+.++ .+.+||+.+..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~~-- 135 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NG-LLYAVGGFDGSTGLSSVEAYNIKSNE-- 135 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEEEEECSSCEEEEEEEEETTTTE--
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CC-EEEEEcCCCCCccCceEEEEeCCCCe--
Confidence 45566667654 358889987665322211111 111122222 34 4777777553 58888987665
Q ss_pred eEEeccCCCC--eEEEEEcCCCCEEEEEeCC-------CeEEEEECCCCceeeEe--ecCCCeEEEEEecCCCEEEEEEc
Q 008356 74 VSWLKQHSAP--TAGISFSSDDKIIASVGLD-------KKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAGTS 142 (568)
Q Consensus 74 v~~l~~H~~~--VtslafsPdg~~LaSgs~D-------GtV~IWDlrt~~~v~~~--~h~~~ItsLafsPdg~~LasGs~ 142 (568)
...+.....+ -.+++.. ++++++.|+.+ ..+.+||+.+.+-...- .....-.+++.. ++++++.|+.
T Consensus 136 W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~ 213 (302)
T 2xn4_A 136 WFHVAPMNTRRSSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL-NNLLYAVGGH 213 (302)
T ss_dssp EEEECCCSSCCBSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEECCB
T ss_pred EeecCCCCCcccCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE-CCEEEEECCC
Confidence 2222221111 1122222 56666776642 35889999876543322 111111122222 5677778776
Q ss_pred C-----CeEEEEECCCC
Q 008356 143 N-----GRVVFYDIRGK 154 (568)
Q Consensus 143 D-----G~V~VWDlrt~ 154 (568)
+ ..|.+||+.+.
T Consensus 214 ~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 214 DGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp SSSSBCCCEEEEETTTT
T ss_pred CCCcccceEEEEeCCCC
Confidence 4 36889999875
No 311
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.18 E-value=1.9 Score=46.06 Aligned_cols=128 Identities=13% Similarity=0.211 Sum_probs=82.6
Q ss_pred ccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC----CCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCc-------
Q 008356 46 SRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH----SAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRR------- 114 (568)
Q Consensus 46 spdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H----~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~------- 114 (568)
+.++.. ++.+ .++.||.-++.... ..+.+... -..|..+..+|+|++|+..+ +..|.|..+..+.
T Consensus 29 ~~n~t~-i~~a-~~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 29 SQNGTR-IVFI-QDNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp ETTTTE-EEEE-ETTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHH
T ss_pred EcCCCE-EEEE-ECCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccc
Confidence 445553 3332 34788888886433 23333332 23688899999999999886 4578998886321
Q ss_pred -----eeeEee-------cCCCeEEEEEecC---CCEEEEEEcCCeEEEEECCC-CCCceEEEeec-------CCCCCee
Q 008356 115 -----PSSCIT-------YEAPFSSLAFIDD---DWILTAGTSNGRVVFYDIRG-KPQPLTVLRAC-------SSSEAVS 171 (568)
Q Consensus 115 -----~v~~~~-------h~~~ItsLafsPd---g~~LasGs~DG~V~VWDlrt-~~~~v~~l~~~-------~h~~~Vt 171 (568)
..+.+. ...+|..+.|+|- +..|++-..|+.|++||+.. ...|. .+... .....|.
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~ 183 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDIT 183 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEE
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEE
Confidence 111221 2467999999994 67999999999999999986 33343 33211 1224567
Q ss_pred EEEEccC
Q 008356 172 SLCWQRA 178 (568)
Q Consensus 172 sLafspd 178 (568)
+++|..+
T Consensus 184 S~~Fg~~ 190 (452)
T 3pbp_A 184 DLEFSKD 190 (452)
T ss_dssp EEEECTT
T ss_pred EEEEcCC
Confidence 7777763
No 312
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.18 E-value=0.53 Score=46.31 Aligned_cols=143 Identities=17% Similarity=0.183 Sum_probs=75.9
Q ss_pred CCCEEEEEECC----CcEEEEECCCCceeEEeeCCC-CCcEEEEEEccCCCeEEEEEeCC------CeEEEEECCCCCce
Q 008356 5 KDEHLASISLS----GDLILHNLASGAKAAELKDPN-EQVLRVLDYSRNSRHLLVTAGDD------GTLHLWDTTGRSPK 73 (568)
Q Consensus 5 dG~~LasGs~D----G~V~VWDl~tg~~v~~l~~~h-~~~Vs~Lafspdg~~lLaTgs~D------GtV~VWDl~t~~~~ 73 (568)
++.+++.|+.+ ..+.+||+.+.+-...-.... ......+.+ ++. +++.|+.+ ..+.+||..+..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~d~~~~~-- 129 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGK-IYTSGGSEVGNSALYLFECYDTRTES-- 129 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTE-EEEECCBBTTBSCCCCEEEEETTTTE--
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCE-EEEECCCCCCCcEeeeEEEEeCCCCc--
Confidence 45566677654 578899987765332211111 111122222 444 77777765 458999987765
Q ss_pred eEEeccCCC--CeEEEEEcCCCCEEEEEeC---------CCeEEEEECCCCceeeEee--cCCCeEEEEEecCCCEEEEE
Q 008356 74 VSWLKQHSA--PTAGISFSSDDKIIASVGL---------DKKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAG 140 (568)
Q Consensus 74 v~~l~~H~~--~VtslafsPdg~~LaSgs~---------DGtV~IWDlrt~~~v~~~~--h~~~ItsLafsPdg~~LasG 140 (568)
...+..... .-.+++. -++++++.|+. -..+.+||+.+.+-...-. ....-.+++.. ++++++.|
T Consensus 130 W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~G 207 (306)
T 3ii7_A 130 WHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV-KDKIFAVG 207 (306)
T ss_dssp EEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEEC
T ss_pred eEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE-CCEEEEEe
Confidence 222221111 1111222 25666676653 3458899998875433321 11111122222 56777777
Q ss_pred EcC-----CeEEEEECCCC
Q 008356 141 TSN-----GRVVFYDIRGK 154 (568)
Q Consensus 141 s~D-----G~V~VWDlrt~ 154 (568)
+.+ ..|.+||+.+.
T Consensus 208 G~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 208 GQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp CEETTEEBCCEEEEETTTT
T ss_pred CCCCCCCCceEEEeeCCCC
Confidence 654 35889999875
No 313
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.99 E-value=5.9 Score=47.36 Aligned_cols=148 Identities=12% Similarity=0.061 Sum_probs=91.5
Q ss_pred ccCCCCEEEEEECC---------CcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc
Q 008356 2 YNCKDEHLASISLS---------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP 72 (568)
Q Consensus 2 fSpdG~~LasGs~D---------G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~ 72 (568)
|..+...|+++... ..|++.+......+.++....+..|...+.+ +. +++.+. ++.+.+++++.+..
T Consensus 469 f~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~-~vvva~-g~~l~~fel~~~~L 544 (1158)
T 3ei3_A 469 FVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQAKNISVASCN--SS-QVVVAV-GRALYYLQIHPQEL 544 (1158)
T ss_dssp CCSSSCEEEEEEETTTEEEEEESSCEEEEESSSCCEEEEECCTTCCCCCEEEEC--SS-EEEEEE-TTEEEEEEEETTEE
T ss_pred ccCCCCcEEEEEcCCCeEEEEecCEEEEEECCCCeEEEEEECCCCCEEEEEEeC--CC-EEEEEE-CCEEEEEEeeCCce
Confidence 34455556655432 2355666554556666664444445544544 33 344444 67888888865432
Q ss_pred eeEEeccCCCCeEEEEEcCC------CCEEEEEeC-CCeEEEEECCCCceeeEeec--CCCeEEEEEec--CCCEEEEEE
Q 008356 73 KVSWLKQHSAPTAGISFSSD------DKIIASVGL-DKKLYTYDPGSRRPSSCITY--EAPFSSLAFID--DDWILTAGT 141 (568)
Q Consensus 73 ~v~~l~~H~~~VtslafsPd------g~~LaSgs~-DGtV~IWDlrt~~~v~~~~h--~~~ItsLafsP--dg~~LasGs 141 (568)
....-..-...|.|+++.+. .++++.|.. |++|+|+++.+.+.+..... .....++.+.. ...+|.+|-
T Consensus 545 ~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl 624 (1158)
T 3ei3_A 545 RQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCAL 624 (1158)
T ss_dssp EEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEE
T ss_pred eeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEe
Confidence 12122234568999999862 478899986 99999999988766655433 33555555543 345788999
Q ss_pred cCCeEEEEECCC
Q 008356 142 SNGRVVFYDIRG 153 (568)
Q Consensus 142 ~DG~V~VWDlrt 153 (568)
.||.+.-+.++.
T Consensus 625 ~dG~l~~~~~d~ 636 (1158)
T 3ei3_A 625 GDGALFYFGLNI 636 (1158)
T ss_dssp TTSEEEEEEECT
T ss_pred CCCeEEEEEEcC
Confidence 999987776653
No 314
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.93 E-value=2.8 Score=42.88 Aligned_cols=143 Identities=15% Similarity=0.206 Sum_probs=78.5
Q ss_pred EEEEEccCCCeEEEEEeC-------------CCeEEEEECCCCC-------ceeEEeccCCCCeEEEEEcC-CCCEEEEE
Q 008356 41 RVLDYSRNSRHLLVTAGD-------------DGTLHLWDTTGRS-------PKVSWLKQHSAPTAGISFSS-DDKIIASV 99 (568)
Q Consensus 41 s~Lafspdg~~lLaTgs~-------------DGtV~VWDl~t~~-------~~v~~l~~H~~~VtslafsP-dg~~LaSg 99 (568)
..|+|.|+|. ++++.+. .|.|.-++.+..- .......+|. ....++|+| +++++++-
T Consensus 138 ~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~r-np~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 138 GRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHR-NPQGIDWHRASGVMVATE 215 (354)
T ss_dssp CCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCS-CCCEEEECTTTCCEEEEE
T ss_pred ceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccC-CcceEEEeCCCCCEEEEe
Confidence 5689999997 5655432 2456666655431 0112233443 357899999 66655544
Q ss_pred eCCC---eEEEEECCC--------C--------ceeeEe-ecCCCeEEEEEe-------cCCCEEEEEEcCCeEEEEECC
Q 008356 100 GLDK---KLYTYDPGS--------R--------RPSSCI-TYEAPFSSLAFI-------DDDWILTAGTSNGRVVFYDIR 152 (568)
Q Consensus 100 s~DG---tV~IWDlrt--------~--------~~v~~~-~h~~~ItsLafs-------Pdg~~LasGs~DG~V~VWDlr 152 (568)
.... .|.+..-.. + .++..+ ........++|. .+|.++++.-..+.|...++.
T Consensus 216 ~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~ 295 (354)
T 3a9g_A 216 HGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFG 295 (354)
T ss_dssp CCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEEC
T ss_pred cCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEEC
Confidence 3222 244332110 0 122222 123457788883 467777766677889999987
Q ss_pred CCCCceEEEeec-CCCCCeeEEEEccCCCeEEEe
Q 008356 153 GKPQPLTVLRAC-SSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 153 t~~~~v~~l~~~-~h~~~VtsLafspdg~~Las~ 185 (568)
............ +....+..+++.|+|.+.++.
T Consensus 296 ~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 296 DNMEVRKISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp GGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred CCCcccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 542222111111 224578899999988655544
No 315
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.92 E-value=4.9 Score=43.07 Aligned_cols=147 Identities=14% Similarity=0.168 Sum_probs=95.1
Q ss_pred cCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCC-
Q 008356 3 NCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHS- 81 (568)
Q Consensus 3 SpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~- 81 (568)
||..+.||.=. ..++.|||+++...++.+.- .++++. -+|-.+. .|+... +..|+-|++.+...+++.+..|.
T Consensus 74 nP~~~iiALra-g~~lQiFnle~K~klks~~~-~e~Vvf-WkWis~~--~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~ 147 (494)
T 1bpo_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTF-WKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSS 147 (494)
T ss_dssp CSSSSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCE-EEEEETT--EEEEEC-SSEEEEEESSSSCCCEEEEECCGG
T ss_pred CCCCcEEEEec-CCeEEEEchHHhhhhcceec-CCCceE-EEecCCC--eEEEEc-CCeeEEecccCCCCchhheecchh
Confidence 67777777765 67999999999998888874 345554 4777654 344443 46799999977655666666653
Q ss_pred ---CCeEEEEEcCCCCEEEEEeC-------CCeEEEEECCCCce------------------------------------
Q 008356 82 ---APTAGISFSSDDKIIASVGL-------DKKLYTYDPGSRRP------------------------------------ 115 (568)
Q Consensus 82 ---~~VtslafsPdg~~LaSgs~-------DGtV~IWDlrt~~~------------------------------------ 115 (568)
..|..-..+++.++++..+- .|.+.+|..+.+..
T Consensus 148 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~k 227 (494)
T 1bpo_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGK 227 (494)
T ss_dssp GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCE
T ss_pred cccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcE
Confidence 35666666777777664432 23455555433210
Q ss_pred eeEe--ec----------------------CCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCC
Q 008356 116 SSCI--TY----------------------EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKP 155 (568)
Q Consensus 116 v~~~--~h----------------------~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~ 155 (568)
++.+ .+ .+-..++..++.-.+++..+.-|.|++||+.++.
T Consensus 228 Lhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt 291 (494)
T 1bpo_A 228 LHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGT 291 (494)
T ss_dssp EEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccce
Confidence 0000 00 1123355566666788889999999999999985
No 316
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.89 E-value=1.5 Score=44.17 Aligned_cols=161 Identities=12% Similarity=0.104 Sum_probs=94.6
Q ss_pred ccCCCCEEEEEE--CCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCC-------------CeEEEEE
Q 008356 2 YNCKDEHLASIS--LSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD-------------GTLHLWD 66 (568)
Q Consensus 2 fSpdG~~LasGs--~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~D-------------GtV~VWD 66 (568)
|+.+|+.|+... .++.|+..+. +|.....+.. ..+ --++++++.+.++...+ ..|+..+
T Consensus 21 ~~~~g~~iy~~n~~d~~~ly~~~~-dg~~~~~l~~---~~~--~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~ 94 (302)
T 3s25_A 21 FCESDGEVFFSNTNDNGRLYAMNI-DGSNIHKLSN---DTA--MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIK 94 (302)
T ss_dssp EEEETTEEEEEEGGGTTEEEEEET-TSCSCEEEEE---EEE--EEEEECSSEEEEEEECC------CCSSCCSEEEEEEE
T ss_pred EEEeCCEEEEEeCCCCceEEEEcC-CCCCCEEccC---Cce--eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEe
Confidence 345666666654 2566777775 3333344432 222 35678888766666654 4677788
Q ss_pred CCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEe----CCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEEEEEEc
Q 008356 67 TTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVG----LDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWILTAGTS 142 (568)
Q Consensus 67 l~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs----~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~LasGs~ 142 (568)
+++.+. ..+... . +..|++++++|+-.. .+..|+..++.......+..+.. .+++++++.|+-.+.
T Consensus 95 ~dg~~~--~~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 95 RNGHGS--TVLDPD--P--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNP 164 (302)
T ss_dssp TTSCCC--EEEECS--C--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECT
T ss_pred CCCCcc--eEeecC--C--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeC
Confidence 877652 223222 1 236777888888765 34567777887555444443332 456778888886655
Q ss_pred -CCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEe
Q 008356 143 -NGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 143 -DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~ 185 (568)
...|.+.++.+..+ +.+. . +... ..+.|++.+|+..
T Consensus 165 g~~~Iy~~~l~g~~~--~~l~--~--~~~~-~~~~P~g~~iy~t 201 (302)
T 3s25_A 165 KNGQLYRYDTASQSE--ALFY--D--CNCY-KPVVLDDTNVYYM 201 (302)
T ss_dssp TTCCEEEEETTTTEE--EEEE--C--SCEE-EEEEEETTEEEEE
T ss_pred CCceEEEEECCCCCE--EEEe--C--CCcc-ceeeecCCEEEEE
Confidence 67788888877532 2232 1 2222 3456888887665
No 317
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.54 E-value=0.85 Score=46.84 Aligned_cols=143 Identities=14% Similarity=0.207 Sum_probs=82.8
Q ss_pred CcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEe---ccCCCCeEEEEEcCC---CCEEEEEeC----C----C
Q 008356 38 QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWL---KQHSAPTAGISFSSD---DKIIASVGL----D----K 103 (568)
Q Consensus 38 ~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l---~~H~~~VtslafsPd---g~~LaSgs~----D----G 103 (568)
.....|+|.|+++ |+.+..+|.|+++|.... ..+..+ .........|+|+|+ +..|+.+.. + .
T Consensus 29 ~~P~~ia~~pdG~--l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGGR--YLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETTE--EEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCCe--EEEEeCCCEEEEEeCCCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 3456799999986 555567799999974332 222221 122356899999997 455544432 3 5
Q ss_pred eEEEEECCCC--c---e--e-eEee--cCCCeEEEEEecCCCEEEEEEc-------------CCeEEEEECCCCC---C-
Q 008356 104 KLYTYDPGSR--R---P--S-SCIT--YEAPFSSLAFIDDDWILTAGTS-------------NGRVVFYDIRGKP---Q- 156 (568)
Q Consensus 104 tV~IWDlrt~--~---~--v-~~~~--h~~~ItsLafsPdg~~LasGs~-------------DG~V~VWDlrt~~---~- 156 (568)
.|..|+.... . . + ..+. .......|+|.|||+++++.+. .|.|.-++.+..- .
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 6888887654 1 1 1 1122 1223567999999986666432 2567777765430 0
Q ss_pred --ceEEEeecCCCCCeeEEEEcc-CCCeEEEe
Q 008356 157 --PLTVLRACSSSEAVSSLCWQR-AKPVFIDE 185 (568)
Q Consensus 157 --~v~~l~~~~h~~~VtsLafsp-dg~~Las~ 185 (568)
...++. .++. ....++|+| +|.++++.
T Consensus 186 f~~~~i~a-~G~r-np~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 186 FPNSPIWS-YGHR-NPQGIDWHRASGVMVATE 215 (354)
T ss_dssp STTCCEEE-ECCS-CCCEEEECTTTCCEEEEE
T ss_pred CCCCcEEE-EccC-CcceEEEeCCCCCEEEEe
Confidence 012221 2443 345799999 66666555
No 318
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.36 E-value=0.45 Score=46.68 Aligned_cols=141 Identities=10% Similarity=0.113 Sum_probs=76.1
Q ss_pred CCCEEEEEECC-----CcEEEEECCCCcee--EEeeCCCCCcEEEEEEccCCCeEEEEEeCC-----CeEEEEECCCCCc
Q 008356 5 KDEHLASISLS-----GDLILHNLASGAKA--AELKDPNEQVLRVLDYSRNSRHLLVTAGDD-----GTLHLWDTTGRSP 72 (568)
Q Consensus 5 dG~~LasGs~D-----G~V~VWDl~tg~~v--~~l~~~h~~~Vs~Lafspdg~~lLaTgs~D-----GtV~VWDl~t~~~ 72 (568)
+++.++.|+.+ ..+.+||+.+.+-. ..+.. ......++.+ +++ +++.|+.+ ..+.+||+.+..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~~- 186 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQT-AREGAGLVVA--SGV-IYCLGGYDGLNILNSVEKYDPHTGH- 186 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSS-CCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEETTTTE-
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCC-CcccceEEEE--CCE-EEEECCCCCCcccceEEEEeCCCCc-
Confidence 45566666644 36888998766532 22221 1111122222 444 77777754 458999987765
Q ss_pred eeEEeccCCCC--eEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCceeeEee--cCC-CeEEEEEecCCCEEEEEEc
Q 008356 73 KVSWLKQHSAP--TAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCIT--YEA-PFSSLAFIDDDWILTAGTS 142 (568)
Q Consensus 73 ~v~~l~~H~~~--VtslafsPdg~~LaSgs~D-----GtV~IWDlrt~~~v~~~~--h~~-~ItsLafsPdg~~LasGs~ 142 (568)
...+.....+ -.++... ++++++.|+.+ ..|.+||+.+.+-...-. ... ...++.+ ++++++.|+.
T Consensus 187 -W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~ 262 (301)
T 2vpj_A 187 -WTNVTPMATKRSGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGY 262 (301)
T ss_dssp -EEEECCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred -EEeCCCCCcccccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCc
Confidence 2222221111 1122222 56777777754 468999998875433321 111 1222222 5677777776
Q ss_pred C-----CeEEEEECCCC
Q 008356 143 N-----GRVVFYDIRGK 154 (568)
Q Consensus 143 D-----G~V~VWDlrt~ 154 (568)
+ ..|.+||+++.
T Consensus 263 ~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 263 DGNSLLSSIECYDPIID 279 (301)
T ss_dssp CSSSBEEEEEEEETTTT
T ss_pred CCCcccccEEEEcCCCC
Confidence 5 35788888765
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.35 E-value=0.38 Score=47.31 Aligned_cols=144 Identities=16% Similarity=0.188 Sum_probs=75.5
Q ss_pred CCCEEEEEECCC-----cEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCC-------CeEEEEECCCCCc
Q 008356 5 KDEHLASISLSG-----DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDD-------GTLHLWDTTGRSP 72 (568)
Q Consensus 5 dG~~LasGs~DG-----~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~D-------GtV~VWDl~t~~~ 72 (568)
+++.++.|+.++ .+.+||+.+.+-...-.......-.+++.. ++. +++.|+.+ ..+.+||+.+..
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~~- 184 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV-GGL-LYAVGGYDVASRQCLSTVECYNATTNE- 184 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE-EEEECCEETTTTEECCCEEEEETTTTE-
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE-CCE-EEEEeCCCCCCCccccEEEEEeCCCCc-
Confidence 456667777653 578889876653322111111111122222 343 67776643 358899987765
Q ss_pred eeEEeccCCCC--eEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCceeeEee--cCCCeEEEEEecCCCEEEEEEcC
Q 008356 73 KVSWLKQHSAP--TAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAGTSN 143 (568)
Q Consensus 73 ~v~~l~~H~~~--VtslafsPdg~~LaSgs~D-----GtV~IWDlrt~~~v~~~~--h~~~ItsLafsPdg~~LasGs~D 143 (568)
...+.....+ -.+++.. ++++++.|+.+ ..+.+||+.+.+-...-. ....-..++. -++++++.|+.+
T Consensus 185 -W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~-~~~~i~v~GG~~ 261 (302)
T 2xn4_A 185 -WTYIAEMSTRRSGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA-VNGLLYVVGGDD 261 (302)
T ss_dssp -EEEECCCSSCCBSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCBC
T ss_pred -EEECCCCccccccccEEEE-CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE-ECCEEEEECCcC
Confidence 2222211111 1122222 56777777754 368999998865433221 1111112222 256777887765
Q ss_pred C-----eEEEEECCCC
Q 008356 144 G-----RVVFYDIRGK 154 (568)
Q Consensus 144 G-----~V~VWDlrt~ 154 (568)
+ .|.+||+.+.
T Consensus 262 ~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 262 GSCNLASVEYYNPTTD 277 (302)
T ss_dssp SSSBCCCEEEEETTTT
T ss_pred CCcccccEEEEcCCCC
Confidence 3 4888998875
No 320
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.11 E-value=1.5 Score=46.89 Aligned_cols=101 Identities=10% Similarity=0.192 Sum_probs=57.4
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeE--EeeC-----CCCCcEEEEEEccC---CCeEEEEEeC------------
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAA--ELKD-----PNEQVLRVLDYSRN---SRHLLVTAGD------------ 58 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~--~l~~-----~h~~~Vs~Lafspd---g~~lLaTgs~------------ 58 (568)
+|.|+|+++++--..+.|++++..+++... .+.. .....+..|+|+|+ +..++++-+.
T Consensus 33 a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~ 112 (454)
T 1cru_A 33 LWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPN 112 (454)
T ss_dssp EECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCE
T ss_pred EEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcccccc
Confidence 367899866654333478888865555322 2221 02345678999995 4435554432
Q ss_pred CCeEEEEECCCCC-------ceeEEec-cCCCCeEEEEEcCCCCEEEEEeC
Q 008356 59 DGTLHLWDTTGRS-------PKVSWLK-QHSAPTAGISFSSDDKIIASVGL 101 (568)
Q Consensus 59 DGtV~VWDl~t~~-------~~v~~l~-~H~~~VtslafsPdg~~LaSgs~ 101 (568)
...|.-|+..... ..+..+. ........|+|.||++++++.+.
T Consensus 113 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 113 QTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 2356666653321 1111122 12234789999999998887664
No 321
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.08 E-value=0.87 Score=44.47 Aligned_cols=133 Identities=11% Similarity=0.085 Sum_probs=79.0
Q ss_pred CCEEEEEECCCcEEEEECCCCc------eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc
Q 008356 6 DEHLASISLSGDLILHNLASGA------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ 79 (568)
Q Consensus 6 G~~LasGs~DG~V~VWDl~tg~------~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~ 79 (568)
...|+....| +|++=....+. ....+-...-..+.+++|+|++. +.++ .+|.++-.+..+.... . +.+
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~-~-W~~ 77 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDND-N-WMG 77 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTC-C-HHH
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCcc-EEEE--eCCeEEEECCCCCCcc-c-ccc
Confidence 4456677777 66665544443 12223221123566899999887 4444 7787666665432211 1 111
Q ss_pred CCCC--------eEEEEEcCCCCEEEEEeCCCeEEEEECCCCcee------eEeec--CCCeEEEEEecCCCEEEEEEcC
Q 008356 80 HSAP--------TAGISFSSDDKIIASVGLDKKLYTYDPGSRRPS------SCITY--EAPFSSLAFIDDDWILTAGTSN 143 (568)
Q Consensus 80 H~~~--------VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v------~~~~h--~~~ItsLafsPdg~~LasGs~D 143 (568)
-... ..++.|.+++.+.++ .||.|+-++-.+.... ..+.. =..+..|.+.|+|.+.++. |
T Consensus 78 s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--d 153 (236)
T 1tl2_A 78 RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--G 153 (236)
T ss_dssp HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--T
T ss_pred cccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--C
Confidence 1222 378899999998887 5699988876432211 11211 1468999999999887777 7
Q ss_pred CeEEE
Q 008356 144 GRVVF 148 (568)
Q Consensus 144 G~V~V 148 (568)
+.++-
T Consensus 154 g~lyr 158 (236)
T 1tl2_A 154 QQFYK 158 (236)
T ss_dssp TEEEE
T ss_pred CcEEe
Confidence 77543
No 322
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.95 E-value=1.1 Score=44.38 Aligned_cols=143 Identities=13% Similarity=0.125 Sum_probs=74.9
Q ss_pred CCCCEEEEEEC----C-------CcEEEEECCCCceeEEeeC-CCCCcEEEEEEccCCCeEEEEEeCC--------CeEE
Q 008356 4 CKDEHLASISL----S-------GDLILHNLASGAKAAELKD-PNEQVLRVLDYSRNSRHLLVTAGDD--------GTLH 63 (568)
Q Consensus 4 pdG~~LasGs~----D-------G~V~VWDl~tg~~v~~l~~-~h~~~Vs~Lafspdg~~lLaTgs~D--------GtV~ 63 (568)
.+++.++.|+. + ..+.+||+.+.+-. .+.. .....-.+++.. ++ .+++.|+.+ ..+.
T Consensus 44 ~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~ 120 (315)
T 4asc_A 44 KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL-GMPPLPSPRCLFGLGEA-LN-SIYVVGGREIKDGERCLDSVM 120 (315)
T ss_dssp TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE-ECCCBSSCEESCEEEEE-TT-EEEEECCEESSTTCCBCCCEE
T ss_pred ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE-ECCCCCcchhceeEEEE-CC-EEEEEeCCcCCCCCcccceEE
Confidence 35677778873 1 12778898776532 2211 011111112222 34 477777742 4589
Q ss_pred EEECCCCCceeEEeccCCCC--eEEEEEcCCCCEEEEEeC-C-----CeEEEEECCCCceeeEee--cCC-CeEEEEEec
Q 008356 64 LWDTTGRSPKVSWLKQHSAP--TAGISFSSDDKIIASVGL-D-----KKLYTYDPGSRRPSSCIT--YEA-PFSSLAFID 132 (568)
Q Consensus 64 VWDl~t~~~~v~~l~~H~~~--VtslafsPdg~~LaSgs~-D-----GtV~IWDlrt~~~v~~~~--h~~-~ItsLafsP 132 (568)
+||..+.+ ...+.....+ -.+++. -++++++.|+. + ..+.+||+.+.+-...-. ... ...++.+
T Consensus 121 ~~d~~~~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 195 (315)
T 4asc_A 121 CYDRLSFK--WGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH-- 195 (315)
T ss_dssp EEETTTTE--EEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--
T ss_pred EECCCCCc--EeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--
Confidence 99987764 2222211111 112222 35667777775 2 368999998765332221 111 1222222
Q ss_pred CCCEEEEEEcCC-----eEEEEECCCC
Q 008356 133 DDWILTAGTSNG-----RVVFYDIRGK 154 (568)
Q Consensus 133 dg~~LasGs~DG-----~V~VWDlrt~ 154 (568)
++++++.|+.++ .+.+||+.+.
T Consensus 196 ~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 196 DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCEEEEEeccCCCCccceEEEEECCCC
Confidence 567888887654 4888998875
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.88 E-value=0.73 Score=45.57 Aligned_cols=140 Identities=12% Similarity=0.087 Sum_probs=74.3
Q ss_pred CCCEEEEEEC----C-----CcEEEEECCCCceeE--EeeCCCCCcEEEEEEccCCCeEEEEEeCC-----CeEEEEECC
Q 008356 5 KDEHLASISL----S-----GDLILHNLASGAKAA--ELKDPNEQVLRVLDYSRNSRHLLVTAGDD-----GTLHLWDTT 68 (568)
Q Consensus 5 dG~~LasGs~----D-----G~V~VWDl~tg~~v~--~l~~~h~~~Vs~Lafspdg~~lLaTgs~D-----GtV~VWDl~ 68 (568)
++++++.|+. + ..+.+||+.+.+-.. .+... ......+.+ ++. +++.|+.+ ..+.+||..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP-RNRIGVGVI--DGH-IYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSC-CBTCEEEEE--TTE-EEEECCEETTEECCCEEEEETT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcC-ccccEEEEE--CCE-EEEEcCCCCCcccccEEEECCC
Confidence 4455666665 2 468889987664322 11111 111122222 444 77777643 358899987
Q ss_pred CCCceeEEeccCC---CCeEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCceeeEe--ecCC-CeEEEEEecCCCEE
Q 008356 69 GRSPKVSWLKQHS---APTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCI--TYEA-PFSSLAFIDDDWIL 137 (568)
Q Consensus 69 t~~~~v~~l~~H~---~~VtslafsPdg~~LaSgs~D-----GtV~IWDlrt~~~v~~~--~h~~-~ItsLafsPdg~~L 137 (568)
+.. ...+.... ....++.+ ++++++.|+.+ ..+.+||+.+.+-...- .... ...++.+ +++++
T Consensus 146 ~~~--W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iy 219 (308)
T 1zgk_A 146 RDE--WHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIY 219 (308)
T ss_dssp TTE--EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEE
T ss_pred CCe--EeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEE
Confidence 664 22222111 11122222 56777777654 45899999876533221 1111 1222223 56777
Q ss_pred EEEEcC-----CeEEEEECCCC
Q 008356 138 TAGTSN-----GRVVFYDIRGK 154 (568)
Q Consensus 138 asGs~D-----G~V~VWDlrt~ 154 (568)
+.|+.+ ..|.+||+.+.
T Consensus 220 v~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 220 AAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp EECCBCSSSBCCCEEEEETTTT
T ss_pred EEeCCCCCCccceEEEEeCCCC
Confidence 777764 45999999875
No 324
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.83 E-value=0.75 Score=47.15 Aligned_cols=111 Identities=12% Similarity=0.113 Sum_probs=61.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeEEee------CCCCCcEEEEEEccC---CCeEEEEEeC-------CCeEEE
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAAELK------DPNEQVLRVLDYSRN---SRHLLVTAGD-------DGTLHL 64 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~------~~h~~~Vs~Lafspd---g~~lLaTgs~-------DGtV~V 64 (568)
+|.|+|++|+++...|.|++++. +++....+. .........|+|+|+ +..++++-.. ...|..
T Consensus 24 ~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r 102 (353)
T 2g8s_A 24 AFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGY 102 (353)
T ss_dssp EECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEE
T ss_pred EEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEE
Confidence 47789984555667899999985 343221111 112345678999996 4435554333 235666
Q ss_pred EECCCCCce---eE-Eecc------CCCCeEEEEEcCCCCEEEEEeCC-------------CeEEEEECCC
Q 008356 65 WDTTGRSPK---VS-WLKQ------HSAPTAGISFSSDDKIIASVGLD-------------KKLYTYDPGS 112 (568)
Q Consensus 65 WDl~t~~~~---v~-~l~~------H~~~VtslafsPdg~~LaSgs~D-------------GtV~IWDlrt 112 (568)
|++...... .. .+.. .......|+|.||+.++++.+.. ++|.-+|...
T Consensus 103 ~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG 173 (353)
T 2g8s_A 103 GRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQG 173 (353)
T ss_dssp EEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTS
T ss_pred EEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCC
Confidence 776543100 11 1111 11224679999999766665442 4677777653
No 325
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.70 E-value=2 Score=42.43 Aligned_cols=143 Identities=14% Similarity=0.182 Sum_probs=73.1
Q ss_pred CCCCEEEEEEC----CC-------cEEEEECCCCceeE--EeeCCCCCcEEEEEEccCCCeEEEEEeCC-------CeEE
Q 008356 4 CKDEHLASISL----SG-------DLILHNLASGAKAA--ELKDPNEQVLRVLDYSRNSRHLLVTAGDD-------GTLH 63 (568)
Q Consensus 4 pdG~~LasGs~----DG-------~V~VWDl~tg~~v~--~l~~~h~~~Vs~Lafspdg~~lLaTgs~D-------GtV~ 63 (568)
.++.+++.|+. ++ .+.+||..+.+-.. .+... ......+.+ ++ .+++.|+.+ ..+.
T Consensus 55 ~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~-r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~ 130 (318)
T 2woz_A 55 QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSA-RCLFGLGEV--DD-KIYVVAGKDLQTEASLDSVL 130 (318)
T ss_dssp SSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSC-BCSCEEEEE--TT-EEEEEEEEBTTTCCEEEEEE
T ss_pred ECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcc-ccccceEEE--CC-EEEEEcCccCCCCcccceEE
Confidence 35667777773 12 17788887655322 11111 111122222 34 477777754 3488
Q ss_pred EEECCCCCceeEEeccCCCCe--EEEEEcCCCCEEEEEeC------CCeEEEEECCCCceeeEee--cCCCeEEEEEecC
Q 008356 64 LWDTTGRSPKVSWLKQHSAPT--AGISFSSDDKIIASVGL------DKKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDD 133 (568)
Q Consensus 64 VWDl~t~~~~v~~l~~H~~~V--tslafsPdg~~LaSgs~------DGtV~IWDlrt~~~v~~~~--h~~~ItsLafsPd 133 (568)
+||..+.+ ...+.....+. .+++. .++++++.|+. -..+.+||+.+.+-...-. ......+++. -+
T Consensus 131 ~yd~~~~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~ 206 (318)
T 2woz_A 131 CYDPVAAK--WSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAI-HK 206 (318)
T ss_dssp EEETTTTE--EEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ET
T ss_pred EEeCCCCC--EeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEE-EC
Confidence 88987665 22222211111 11222 35667777764 2358999998875433221 1111112222 25
Q ss_pred CCEEEEEEcC-----CeEEEEECCCC
Q 008356 134 DWILTAGTSN-----GRVVFYDIRGK 154 (568)
Q Consensus 134 g~~LasGs~D-----G~V~VWDlrt~ 154 (568)
+++++.|+.+ ..|.+||+.+.
T Consensus 207 ~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 207 GKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp TEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred CEEEEEcCcCCCCccceEEEEECCCC
Confidence 6777777653 34778998875
No 326
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.56 E-value=1.6 Score=45.14 Aligned_cols=101 Identities=15% Similarity=0.095 Sum_probs=58.8
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCceeE--Eee---CCCCCcEEEEEEccC---CCeEEEEE--eCCCeEEEEECCCC
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAKAA--ELK---DPNEQVLRVLDYSRN---SRHLLVTA--GDDGTLHLWDTTGR 70 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~v~--~l~---~~h~~~Vs~Lafspd---g~~lLaTg--s~DGtV~VWDl~t~ 70 (568)
+|.|||+++++--..|.|++++..+++... .+. .........|+++|+ +..++++- ..++.|.-|.+...
T Consensus 38 a~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~ 117 (347)
T 3das_A 38 APLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEK 117 (347)
T ss_dssp EECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTT
T ss_pred EEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCC
Confidence 477899876665448999999876565422 121 112455788999985 33344432 24556666766541
Q ss_pred -----C---c--eeEEec-cCCCCeEEEEEcCCCCEEEEEeC
Q 008356 71 -----S---P--KVSWLK-QHSAPTAGISFSSDDKIIASVGL 101 (568)
Q Consensus 71 -----~---~--~v~~l~-~H~~~VtslafsPdg~~LaSgs~ 101 (568)
. . ++..+. ........|.|.||+.++++.+.
T Consensus 118 ~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd 159 (347)
T 3das_A 118 KPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGE 159 (347)
T ss_dssp SCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBC
T ss_pred CcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECC
Confidence 1 1 111222 11223567999999988887653
No 327
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.44 E-value=1.9 Score=48.43 Aligned_cols=148 Identities=11% Similarity=0.135 Sum_probs=83.4
Q ss_pred CCCEEEEEECC----CcEEEEECCCCceeEEe-e-----CCCCCcEEEEEEcc-CCCeEEEEEeCC------CeEEEEEC
Q 008356 5 KDEHLASISLS----GDLILHNLASGAKAAEL-K-----DPNEQVLRVLDYSR-NSRHLLVTAGDD------GTLHLWDT 67 (568)
Q Consensus 5 dG~~LasGs~D----G~V~VWDl~tg~~v~~l-~-----~~h~~~Vs~Lafsp-dg~~lLaTgs~D------GtV~VWDl 67 (568)
++..++.||.+ ..+.+||+.+++-...- . ......-.+++... ++. +++.|+.+ ..+.+||.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~-lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQ-LLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTE-EEEECCBSSTTCBCCCCEEEET
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCE-EEEEcCCCCCCCccccEEEEeC
Confidence 45667777753 46889998776543322 1 11111122333333 454 77777754 35888998
Q ss_pred CCCCceeEEeccCC--CCeEEEEEcCCCCEEEEEeCCC--eEEEEECCCCceeeEee------cCCCeEEEEEecC-CCE
Q 008356 68 TGRSPKVSWLKQHS--APTAGISFSSDDKIIASVGLDK--KLYTYDPGSRRPSSCIT------YEAPFSSLAFIDD-DWI 136 (568)
Q Consensus 68 ~t~~~~v~~l~~H~--~~VtslafsPdg~~LaSgs~DG--tV~IWDlrt~~~v~~~~------h~~~ItsLafsPd-g~~ 136 (568)
.+.. ...+.... ..-.+++...++++++.|+.++ .+.+||+.+.+-...-. ......++.+..+ +++
T Consensus 476 ~t~~--W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTRE--WSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTE--EEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCc--EEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 7754 22222111 1112233323788888888655 69999998865332221 1122334566655 667
Q ss_pred EEEEEc--C-----CeEEEEECCCCC
Q 008356 137 LTAGTS--N-----GRVVFYDIRGKP 155 (568)
Q Consensus 137 LasGs~--D-----G~V~VWDlrt~~ 155 (568)
++.|+. + ..|.+||+.+..
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCc
Confidence 777765 2 458999998774
No 328
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.35 E-value=3.2 Score=40.89 Aligned_cols=139 Identities=13% Similarity=0.119 Sum_probs=72.3
Q ss_pred EEEEEECCCcEEEEECCCCceeE-EeeCCCCCcEEEEEEccCCCeEEEEEeC-----C------CeEEEEECCCCCceeE
Q 008356 8 HLASISLSGDLILHNLASGAKAA-ELKDPNEQVLRVLDYSRNSRHLLVTAGD-----D------GTLHLWDTTGRSPKVS 75 (568)
Q Consensus 8 ~LasGs~DG~V~VWDl~tg~~v~-~l~~~h~~~Vs~Lafspdg~~lLaTgs~-----D------GtV~VWDl~t~~~~v~ 75 (568)
+++.|+ ..+.+||..+++-.. .+..+....-.++ ...++. +++.|+. . ..+.+||..+.+ ..
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~-~~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~--W~ 80 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSL-VTKENQ-VFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE--WL 80 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEE-ECTTCC-EEEEEEEEECSSCSSSCEEEEEEEEETTTTE--EE
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEE-EEECCE-EEEEcCcccCCCCCccccccceEEecCCCCe--EE
Confidence 344555 579999998876432 2221112222222 334555 7777773 1 127788887664 22
Q ss_pred EeccCCCCe--EEEEEcCCCCEEEEEeCC--------CeEEEEECCCCceeeEee--cCCCeEEEEEecCCCEEEEEEc-
Q 008356 76 WLKQHSAPT--AGISFSSDDKIIASVGLD--------KKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAGTS- 142 (568)
Q Consensus 76 ~l~~H~~~V--tslafsPdg~~LaSgs~D--------GtV~IWDlrt~~~v~~~~--h~~~ItsLafsPdg~~LasGs~- 142 (568)
.+.....+- .+++.. ++++++.|+.+ ..+.+||+.+.+-...-. ....-.+++. -++++++.|+.
T Consensus 81 ~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~ 158 (315)
T 4asc_A 81 GMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKG 158 (315)
T ss_dssp ECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBC
T ss_pred ECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCC
Confidence 222211111 112222 56667777632 358999998765332211 1111112222 35677777776
Q ss_pred C-----CeEEEEECCCC
Q 008356 143 N-----GRVVFYDIRGK 154 (568)
Q Consensus 143 D-----G~V~VWDlrt~ 154 (568)
+ ..+.+||+.+.
T Consensus 159 ~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 159 SDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TTSCBCCCEEEEETTTT
T ss_pred CCCcccceEEEEeCCCC
Confidence 2 45899998875
No 329
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.12 E-value=0.13 Score=53.27 Aligned_cols=144 Identities=11% Similarity=0.111 Sum_probs=85.7
Q ss_pred CCEEEEEECCCcEEEEECCCCceeEEeeCCC-CCcEEEEEE--ccCCCeEEEEE-eCCCeEEEEECCCCCceeEEecc--
Q 008356 6 DEHLASISLSGDLILHNLASGAKAAELKDPN-EQVLRVLDY--SRNSRHLLVTA-GDDGTLHLWDTTGRSPKVSWLKQ-- 79 (568)
Q Consensus 6 G~~LasGs~DG~V~VWDl~tg~~v~~l~~~h-~~~Vs~Laf--spdg~~lLaTg-s~DGtV~VWDl~t~~~~v~~l~~-- 79 (568)
+.++++++.||.|+-+|.++|+.+-.++... ...+. ..- .+.+..+++.. ..||.|+.+|..++..+...-..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~-~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIE-IQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEE-CCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEE-ecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 3478899999999999999999998887531 12222 110 01122234333 58999999998776422111100
Q ss_pred -CCCCeEE---EEE-c----CCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCe--------EEEEEe-----cCCCEE
Q 008356 80 -HSAPTAG---ISF-S----SDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPF--------SSLAFI-----DDDWIL 137 (568)
Q Consensus 80 -H~~~Vts---laf-s----Pdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~I--------tsLafs-----Pdg~~L 137 (568)
...++.. ... . ..+..+++++.++.+...|+++|+.+..+....+. .|.... ..+..|
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v 168 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMI 168 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeE
Confidence 1122221 000 0 14667889999999999999999999888543221 122211 124677
Q ss_pred EEEEcCCeEEEEE
Q 008356 138 TAGTSNGRVVFYD 150 (568)
Q Consensus 138 asGs~DG~V~VWD 150 (568)
+.+..+..|.+.+
T Consensus 169 ~ig~~~y~v~~~~ 181 (339)
T 2be1_A 169 VIGKTIFELGIHS 181 (339)
T ss_dssp EEEEEEEECEECC
T ss_pred EEecceEEEEEEC
Confidence 7887777777777
No 330
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.00 E-value=14 Score=41.28 Aligned_cols=163 Identities=13% Similarity=0.096 Sum_probs=92.9
Q ss_pred CEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEec-----cCC
Q 008356 7 EHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLK-----QHS 81 (568)
Q Consensus 7 ~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~-----~H~ 81 (568)
..|.+|..+| |..||..+.+... ........|.++.. .++ .|..+..+ -|..||..+.. ...+. ...
T Consensus 74 g~lWigT~~G-l~~yd~~~~~f~~-~~~~~~~~i~~i~~-~~g--~lWigt~~-Gl~~~~~~~~~--~~~~~~~~~~l~~ 145 (758)
T 3ott_A 74 TYLYMGTDNG-ILVYNYRADRYEQ-PETDFPTDVRTMAL-QGD--TLWLGALN-GLYTYQLQSRK--LTSFDTRRNGLPN 145 (758)
T ss_dssp TEEEEEETTE-EEEEETTTTEECC-CSCCCCSCEEEEEE-ETT--EEEEEETT-EEEEEETTTCC--EEEECHHHHCCSC
T ss_pred CcEEEEeCCC-eEEEeCCCCEEEC-cccCCCceEEEEEe-cCC--cEEEEcCC-cceeEeCCCCe--EEEeccCCCCcCC
Confidence 3556666555 7888987654322 11112234666654 344 36666666 57888987654 22221 123
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe-ec-----CCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCC
Q 008356 82 APTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI-TY-----EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKP 155 (568)
Q Consensus 82 ~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~-~h-----~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~ 155 (568)
..|.++....++.+.+ +..+ -|..||..+++..... .. ...|.++....++..|.+|+. +-|..||..+..
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~ 222 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQ 222 (758)
T ss_dssp SCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTE
T ss_pred CeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCe
Confidence 4688888887777655 4444 4888898776543221 11 224888888887776666764 458889987642
Q ss_pred CceEEEeecCCCCCeeEEEEccCCCeEE
Q 008356 156 QPLTVLRACSSSEAVSSLCWQRAKPVFI 183 (568)
Q Consensus 156 ~~v~~l~~~~h~~~VtsLafspdg~~La 183 (568)
...+... ....|.++....+|.+.+
T Consensus 223 --~~~~~~l-~~~~i~~i~~d~~g~lWi 247 (758)
T 3ott_A 223 --IKQTEAF-HNNSIKSLALDGNGDLLA 247 (758)
T ss_dssp --EEEEEEE-EEEEEEEEEECTTCCEEE
T ss_pred --EEeccCC-CCCeEEEEEEcCCCCEEE
Confidence 1212111 123467777666554433
No 331
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.72 E-value=4.7 Score=41.56 Aligned_cols=145 Identities=19% Similarity=0.302 Sum_probs=84.8
Q ss_pred CcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce-eEEe----ccCCCCeEEEEEcCC---CCEEEEE---eCCCeEE
Q 008356 38 QVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK-VSWL----KQHSAPTAGISFSSD---DKIIASV---GLDKKLY 106 (568)
Q Consensus 38 ~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~-v~~l----~~H~~~VtslafsPd---g~~LaSg---s~DGtV~ 106 (568)
..-..|+|.|+++ ++++--..|.|++++..++... +..+ .........|+++|+ ..+|+.. ..+..|.
T Consensus 32 ~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 32 NSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 3456799999997 6665544899999986554421 2111 123456899999995 3444432 2445666
Q ss_pred EEECCCC-----c---eeeE---ee--cCCCeEEEEEecCCCEEEEEEc-------------CCeEEEEECCCCC---Cc
Q 008356 107 TYDPGSR-----R---PSSC---IT--YEAPFSSLAFIDDDWILTAGTS-------------NGRVVFYDIRGKP---QP 157 (568)
Q Consensus 107 IWDlrt~-----~---~v~~---~~--h~~~ItsLafsPdg~~LasGs~-------------DG~V~VWDlrt~~---~~ 157 (568)
-|.+..+ . ...+ +. .......|+|.|||.+.++.+. .|.|.-++.+... ++
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 6665541 1 1111 21 2234567999999987666432 3566666665430 01
Q ss_pred ---eEEEeecCCCCCeeEEEEccCCCeEEEe
Q 008356 158 ---LTVLRACSSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 158 ---v~~l~~~~h~~~VtsLafspdg~~Las~ 185 (568)
..++ ..+|.. ...++|+|+|.+.++.
T Consensus 191 f~~~~i~-a~G~RN-p~Gla~dp~G~L~~~d 219 (347)
T 3das_A 191 FPGSPVY-SYGHRN-VQGLAWDDKQRLFASE 219 (347)
T ss_dssp STTCCEE-EBCCSB-CCEEEECTTCCEEEEE
T ss_pred CCCCeEE-eeCCCC-cceEEECCCCCEEEEe
Confidence 1222 235544 4578999988777665
No 332
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.60 E-value=0.94 Score=44.47 Aligned_cols=143 Identities=13% Similarity=0.105 Sum_probs=76.3
Q ss_pred CCCEEEEEECC------CcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeC---------CCeEEEEECCC
Q 008356 5 KDEHLASISLS------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD---------DGTLHLWDTTG 69 (568)
Q Consensus 5 dG~~LasGs~D------G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~---------DGtV~VWDl~t 69 (568)
++++++.|+.+ ..+.+||+.+.+-...-.......-.++... +++ +++.|+. -..+.+||..+
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA-NGL-IYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTE-EEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE-CCE-EEEECCCCCCCCcccccceEEEeCCCC
Confidence 45566777755 4688999877653322111111111112222 444 6676653 34588999977
Q ss_pred CCceeEEeccCCCC--eEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCceeeEe--ecC-CCeEEEEEecCCCEEEE
Q 008356 70 RSPKVSWLKQHSAP--TAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCI--TYE-APFSSLAFIDDDWILTA 139 (568)
Q Consensus 70 ~~~~v~~l~~H~~~--VtslafsPdg~~LaSgs~D-----GtV~IWDlrt~~~v~~~--~h~-~~ItsLafsPdg~~Las 139 (568)
.. ...+.....+ -.++... ++++++.|+.+ ..+.+||+.+.+-...- ... ....++.+ ++++++.
T Consensus 179 ~~--W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~ 253 (306)
T 3ii7_A 179 ET--WTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVL 253 (306)
T ss_dssp TE--EEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEE
T ss_pred Ce--EEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEE
Confidence 65 2233221111 1122222 56777777653 35899999886533221 111 12223333 5778888
Q ss_pred EEcC-----CeEEEEECCCC
Q 008356 140 GTSN-----GRVVFYDIRGK 154 (568)
Q Consensus 140 Gs~D-----G~V~VWDlrt~ 154 (568)
|+.+ ..|.+||+.+.
T Consensus 254 GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 254 AGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp ECBCSSSBCCEEEEEETTTT
T ss_pred eCcCCCeeeeeEEEEcCCCC
Confidence 8754 46888998875
No 333
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=92.33 E-value=13 Score=39.38 Aligned_cols=101 Identities=16% Similarity=0.160 Sum_probs=59.0
Q ss_pred cEEEEEEccCCCeEEEEEeCC-CeEEEEECCCCCce-eEEecc------CCCCeEEEEEcCC---CCEEEEEeC------
Q 008356 39 VLRVLDYSRNSRHLLVTAGDD-GTLHLWDTTGRSPK-VSWLKQ------HSAPTAGISFSSD---DKIIASVGL------ 101 (568)
Q Consensus 39 ~Vs~Lafspdg~~lLaTgs~D-GtV~VWDl~t~~~~-v~~l~~------H~~~VtslafsPd---g~~LaSgs~------ 101 (568)
....|+|.|+|+ ++++ ... +.|++++..++... +..+.. .......|+|+|+ +..|+.+..
T Consensus 28 ~P~~~a~~pdG~-l~V~-e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 28 KPHALLWGPDNQ-IWLT-ERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SEEEEEECTTSC-EEEE-ETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CceEEEEcCCCc-EEEE-EcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 446799999998 5555 455 47888876544321 222221 2345779999995 555544432
Q ss_pred -------CCeEEEEECCCC--c---eeeE---ee--cCCCeEEEEEecCCCEEEEEE
Q 008356 102 -------DKKLYTYDPGSR--R---PSSC---IT--YEAPFSSLAFIDDDWILTAGT 141 (568)
Q Consensus 102 -------DGtV~IWDlrt~--~---~v~~---~~--h~~~ItsLafsPdg~~LasGs 141 (568)
...|.-|++... . ...+ +. .......|+|.|||++.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 235666665332 1 1111 21 234578999999998777644
No 334
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.30 E-value=4.6 Score=41.72 Aligned_cols=141 Identities=11% Similarity=0.107 Sum_probs=96.9
Q ss_pred CCCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEE
Q 008356 58 DDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWIL 137 (568)
Q Consensus 58 ~DGtV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~L 137 (568)
++..|.|.|+.......+.-..- -+.-.+|..+.|+.-. ...|.++|+++.+.+..+.....|.--+|-.+ +.|
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi~A----dsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis~-~~L 120 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPISA----DSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTV 120 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEECCC----SEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECSS-SEE
T ss_pred CCCEEEEEECCCCCCcccccccc----ceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecCC-CeE
Confidence 33479999997765433322222 2344588888877765 67899999999999998888888888888765 456
Q ss_pred EEEEcCCeEEEEECCCCCCceEEEeecC--CCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 138 TAGTSNGRVVFYDIRGKPQPLTVLRACS--SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 138 asGs~DG~V~VWDlrt~~~~v~~l~~~~--h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
+..+ +..|+-|++.....|.+++..+. ....|..-..+++.+|++..+-......+ .|.+.+|.+..
T Consensus 121 ~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v-----~G~mQLYS~er 189 (365)
T 2xzh_A 121 ALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRV-----VGAMQLYSVDR 189 (365)
T ss_dssp EEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEE-----EEEEEEEETTT
T ss_pred EEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCcc-----ceeEEEEeecc
Confidence 6555 36799999998778888887432 23467778889999997655322111111 46677776543
No 335
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=92.06 E-value=0.97 Score=44.65 Aligned_cols=142 Identities=13% Similarity=0.078 Sum_probs=74.1
Q ss_pred CCCEEEEEECC-----CcEEEEECCCCceeE--EeeCCCCCcEEEEEEccCCCeEEEEEeCC-----CeEEEEECCCCCc
Q 008356 5 KDEHLASISLS-----GDLILHNLASGAKAA--ELKDPNEQVLRVLDYSRNSRHLLVTAGDD-----GTLHLWDTTGRSP 72 (568)
Q Consensus 5 dG~~LasGs~D-----G~V~VWDl~tg~~v~--~l~~~h~~~Vs~Lafspdg~~lLaTgs~D-----GtV~VWDl~t~~~ 72 (568)
++++++.|+.+ ..+.+||+.+.+-.. .+.. ......++.+ ++ .+++.|+.+ ..+.+||+.+..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~- 195 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLT-RRIGVGVAVL--NR-LLYAVGGFDGTNRLNSAECYYPERNE- 195 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSS-CCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTTE-
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCc-cccceEEEEE--CC-EEEEEeCCCCCCcCceEEEEeCCCCe-
Confidence 45556666543 368889987654322 1111 1111122222 34 477777654 458999987664
Q ss_pred eeEEeccCCC--CeEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCceeeEee--cCCCeEEEEEecCCCEEEEEEcC
Q 008356 73 KVSWLKQHSA--PTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAGTSN 143 (568)
Q Consensus 73 ~v~~l~~H~~--~VtslafsPdg~~LaSgs~D-----GtV~IWDlrt~~~v~~~~--h~~~ItsLafsPdg~~LasGs~D 143 (568)
...+..... .-.+++.. ++++++.|+.+ ..+.+||+.+.+-...-. ....-.+++.. ++++++.|+.+
T Consensus 196 -W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~ 272 (308)
T 1zgk_A 196 -WRMITAMNTIRSGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH-QGRIYVLGGYD 272 (308)
T ss_dssp -EEECCCCSSCCBSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBC
T ss_pred -EeeCCCCCCccccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE-CCEEEEEcCcC
Confidence 222221111 11122222 56777777754 469999998865433221 11111122222 56777777754
Q ss_pred -----CeEEEEECCCC
Q 008356 144 -----GRVVFYDIRGK 154 (568)
Q Consensus 144 -----G~V~VWDlrt~ 154 (568)
..|.+||+.+.
T Consensus 273 ~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 273 GHTFLDSVECYDPDTD 288 (308)
T ss_dssp SSCBCCEEEEEETTTT
T ss_pred CCcccceEEEEcCCCC
Confidence 35778888765
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.86 E-value=2.4 Score=41.33 Aligned_cols=137 Identities=12% Similarity=0.068 Sum_probs=76.9
Q ss_pred CccCCCCEEEEEECCCcEEEEECCCCce------eEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce-
Q 008356 1 MYNCKDEHLASISLSGDLILHNLASGAK------AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK- 73 (568)
Q Consensus 1 afSpdG~~LasGs~DG~V~VWDl~tg~~------v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~- 73 (568)
+|+|+|.+.++ .+|.++-.+..+... ...+-..--....++.|.+++. +.++ .||.|+-++-.+....
T Consensus 47 af~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~-LYav--~dG~iyr~~pP~~~~~~ 121 (236)
T 1tl2_A 47 FLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGY-LYAV--SKDKLYKASPPQSDTDN 121 (236)
T ss_dssp EECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCC
T ss_pred EECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCC-EEEe--CCCEEEEeCCCcCCCCc
Confidence 58898886666 778777767644221 1122110111146788999996 4444 5698887776332211
Q ss_pred -----eEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCc------eeeEee--cCCCeEEEEEecCCCEEEEE
Q 008356 74 -----VSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRR------PSSCIT--YEAPFSSLAFIDDDWILTAG 140 (568)
Q Consensus 74 -----v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~------~v~~~~--h~~~ItsLafsPdg~~LasG 140 (568)
...-..-=..+..|.|.|+|.+.+.. |+.++-.....+. ....+. .-...+.+.|.+++.+.++-
T Consensus 122 Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 122 WIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp HHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE
T ss_pred eeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe
Confidence 11111111457999999999987776 7776543333221 111222 22234557788888777766
Q ss_pred EcCCeE
Q 008356 141 TSNGRV 146 (568)
Q Consensus 141 s~DG~V 146 (568)
++.+
T Consensus 200 --~g~~ 203 (236)
T 1tl2_A 200 --GGKF 203 (236)
T ss_dssp --TTEE
T ss_pred --CCeE
Confidence 6643
No 337
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=91.31 E-value=2.5 Score=43.17 Aligned_cols=143 Identities=10% Similarity=0.103 Sum_probs=79.0
Q ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc-eeEE----eccCCCCeEEEEEcCC---CCEEEEEe-C-------CC
Q 008356 40 LRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP-KVSW----LKQHSAPTAGISFSSD---DKIIASVG-L-------DK 103 (568)
Q Consensus 40 Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~-~v~~----l~~H~~~VtslafsPd---g~~LaSgs-~-------DG 103 (568)
...|+|.|+++. |+.+...|.|++++.++... .+.. ..........|+|+|+ +..|+.+. . ..
T Consensus 20 P~~i~~~pdG~~-l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 20 PWALAFLPDNHG-MLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp EEEEEECSTTCC-EEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred cEEEEEcCCCCE-EEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 467999999974 55566789999998543211 0111 1122345789999995 44444442 2 23
Q ss_pred eEEEEECCCC--c---eeeEe---e----cCCCeEEEEEecCCCEEEEEEc-------------CCeEEEEECCCCC---
Q 008356 104 KLYTYDPGSR--R---PSSCI---T----YEAPFSSLAFIDDDWILTAGTS-------------NGRVVFYDIRGKP--- 155 (568)
Q Consensus 104 tV~IWDlrt~--~---~v~~~---~----h~~~ItsLafsPdg~~LasGs~-------------DG~V~VWDlrt~~--- 155 (568)
.|..|++... . ....+ . .......|+|.|||.+.++.+. .|.|.-+|.+...
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~ 178 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDD 178 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTT
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCC
Confidence 5766766533 1 11111 1 1122467999999955554332 2568778876531
Q ss_pred C--------ceEEEeecCCCCCeeEEEEcc-CCCeEEEe
Q 008356 156 Q--------PLTVLRACSSSEAVSSLCWQR-AKPVFIDE 185 (568)
Q Consensus 156 ~--------~v~~l~~~~h~~~VtsLafsp-dg~~Las~ 185 (568)
. ...++. .+| .....++|++ +|.+.++.
T Consensus 179 npf~~~~~~~~~i~a-~G~-rnp~gl~~d~~~g~l~~~d 215 (353)
T 2g8s_A 179 NPFIKESGVRAEIWS-YGI-RNPQGMAMNPWSNALWLNE 215 (353)
T ss_dssp CTTTTSTTSCTTEEE-ECC-SEEEEEEEETTTTEEEEEE
T ss_pred CCCcCCCCCCccEEE-EcC-cCccceEEECCCCCEEEEe
Confidence 0 112222 234 3367899999 55544443
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=91.10 E-value=1.5 Score=43.35 Aligned_cols=144 Identities=11% Similarity=0.088 Sum_probs=72.9
Q ss_pred CCCEEEEEECC-------CcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeC------CCeEEEEECCCCC
Q 008356 5 KDEHLASISLS-------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD------DGTLHLWDTTGRS 71 (568)
Q Consensus 5 dG~~LasGs~D-------G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~------DGtV~VWDl~t~~ 71 (568)
+++.++.|+.+ ..+.+||+.+.+-...-.......-.+++. .++. +++.|+. -..+.+||..+..
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGM-IYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTE-EEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCE-EEEEcCCCCCCCccceEEEEcCCCCE
Confidence 45566777754 358888987665332211111111111222 3444 6777764 2358999998765
Q ss_pred ceeEEeccCCC--CeEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCceeeEee--cCCCeEEEEEecCCCEEEEEEc
Q 008356 72 PKVSWLKQHSA--PTAGISFSSDDKIIASVGLD-----KKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAGTS 142 (568)
Q Consensus 72 ~~v~~l~~H~~--~VtslafsPdg~~LaSgs~D-----GtV~IWDlrt~~~v~~~~--h~~~ItsLafsPdg~~LasGs~ 142 (568)
...+..... .-.+++.. ++++++.|+.+ ..+.+||+.+.+-...-. ....-.+++. -++++++.|+.
T Consensus 187 --W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~i~v~GG~ 262 (318)
T 2woz_A 187 --WKDLAPMKTPRSMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVS-LAGSLYAIGGF 262 (318)
T ss_dssp --EEEECCCSSCCBSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEE-ETTEEEEECCB
T ss_pred --EEECCCCCCCcccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEE-ECCEEEEECCe
Confidence 222222111 11122222 56777777653 357889998765433221 1111112222 24677777765
Q ss_pred C--------------CeEEEEECCCC
Q 008356 143 N--------------GRVVFYDIRGK 154 (568)
Q Consensus 143 D--------------G~V~VWDlrt~ 154 (568)
+ ..|.+||+.+.
T Consensus 263 ~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 263 AMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp CCBC----CCBCCBCCCEEEEETTTT
T ss_pred eccCCCCceeccceeeeEEEEeCCCC
Confidence 4 34777887765
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=90.33 E-value=2.5 Score=42.37 Aligned_cols=138 Identities=12% Similarity=0.042 Sum_probs=64.5
Q ss_pred CcEEEEECCCCcee--EEeeCCCCCcEEEEEEccCCCeEEEEEeC------CCeEEEEECCCCCceeEEeccCC---CCe
Q 008356 16 GDLILHNLASGAKA--AELKDPNEQVLRVLDYSRNSRHLLVTAGD------DGTLHLWDTTGRSPKVSWLKQHS---APT 84 (568)
Q Consensus 16 G~V~VWDl~tg~~v--~~l~~~h~~~Vs~Lafspdg~~lLaTgs~------DGtV~VWDl~t~~~~v~~l~~H~---~~V 84 (568)
..+.+||+.+.+-. ..+....... .+++.. +++ +++.|+. ...+.+||++........+.... ...
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~-~~~~~~-~~~-iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~ 244 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAG-AAVVNK-GDK-TWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVA 244 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBS-CEEEEE-TTE-EEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCB
T ss_pred ccEEEEeCCCCcEEECCCCCCCCccc-ccEEEE-CCE-EEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccc
Confidence 47899998776533 2222111111 222222 343 6777664 34578888732221233322211 111
Q ss_pred EEEEEcCCCCEEEEEeCC----------------------CeEEEEECCCCceeeEeec-CCCeEEEEEecCCCEEEEEE
Q 008356 85 AGISFSSDDKIIASVGLD----------------------KKLYTYDPGSRRPSSCITY-EAPFSSLAFIDDDWILTAGT 141 (568)
Q Consensus 85 tslafsPdg~~LaSgs~D----------------------GtV~IWDlrt~~~v~~~~h-~~~ItsLafsPdg~~LasGs 141 (568)
...+...++++++.|+.+ ..+.+||+.+.+-...-.. .......+..-++++++.|+
T Consensus 245 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 324 (357)
T 2uvk_A 245 GGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGG 324 (357)
T ss_dssp SCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEE
T ss_pred cceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEee
Confidence 111222256777777632 2578999987653332211 11111222334678888888
Q ss_pred cCC------eEEEEECCCCCC
Q 008356 142 SNG------RVVFYDIRGKPQ 156 (568)
Q Consensus 142 ~DG------~V~VWDlrt~~~ 156 (568)
.++ .|.++++++.+.
T Consensus 325 ~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 325 ETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp ECGGGCEEEEEEEEEC-CCSC
T ss_pred eCCCCCEeeeEEEEEEcCcEe
Confidence 653 366678887643
No 340
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.31 E-value=26 Score=39.02 Aligned_cols=166 Identities=13% Similarity=0.107 Sum_probs=93.7
Q ss_pred EEEEEECCCcEEEEECCCCceeEEee----CCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEecc----
Q 008356 8 HLASISLSGDLILHNLASGAKAAELK----DPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ---- 79 (568)
Q Consensus 8 ~LasGs~DG~V~VWDl~tg~~v~~l~----~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~---- 79 (568)
.|..+..+ -|..+|..+++.. .+. ......|.++....++. |..|..+| |..||..+..........
T Consensus 114 ~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~--lWigt~~G-l~~~~~~~~~~~~~~~~~~~~~ 188 (758)
T 3ott_A 114 TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQ--IYVGTYNG-LCRYIPSNGKFEGIPLPVHSSQ 188 (758)
T ss_dssp EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCC--EEEEETTE-EEEEETTTTEEEEECCCCCTTC
T ss_pred cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCC--EEEEeCCC-HhhCccCCCceEEecCCCcccc
Confidence 45555555 5778887665543 231 11234677777777776 44556654 777887655411111111
Q ss_pred CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEee-cCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCCCCce
Q 008356 80 HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCIT-YEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGKPQPL 158 (568)
Q Consensus 80 H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~-h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~~~~v 158 (568)
....|.++....++..|..+.. +-|..+|..+++...... ....|.++....+|.+. +|+. +-|.+++..+.. .
T Consensus 189 ~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lW-igT~-~Gl~~~~~~~~~--~ 263 (758)
T 3ott_A 189 SNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLL-AGTD-NGLYVYHNDTTP--L 263 (758)
T ss_dssp SSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEE-EEET-TEEEEECCTTSC--C
T ss_pred ccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEE-EEeC-CceeEEecCCCc--E
Confidence 1224888888877775555554 458889988765432211 23357888887777654 4554 458888876642 2
Q ss_pred EEEeec------CCCCCeeEEEEccCCCeEE
Q 008356 159 TVLRAC------SSSEAVSSLCWQRAKPVFI 183 (568)
Q Consensus 159 ~~l~~~------~h~~~VtsLafspdg~~La 183 (568)
..+... -....|.++..+.+|.+.+
T Consensus 264 ~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi 294 (758)
T 3ott_A 264 QHIIHDSRNIQSLTNNIIWNIFADQEHNIWL 294 (758)
T ss_dssp EEECCCTTCTTSCSCSCEEEEEECTTCCEEE
T ss_pred EEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE
Confidence 222110 0123577887777665443
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=90.31 E-value=5.2 Score=39.99 Aligned_cols=92 Identities=14% Similarity=0.062 Sum_probs=44.2
Q ss_pred CeEEEEECCCCCceeEEeccC--CCCe-EEEEEcCCCCEEEEEeC------CCeEEEEEC--CCCceeeEee--cCC-Ce
Q 008356 60 GTLHLWDTTGRSPKVSWLKQH--SAPT-AGISFSSDDKIIASVGL------DKKLYTYDP--GSRRPSSCIT--YEA-PF 125 (568)
Q Consensus 60 GtV~VWDl~t~~~~v~~l~~H--~~~V-tslafsPdg~~LaSgs~------DGtV~IWDl--rt~~~v~~~~--h~~-~I 125 (568)
..+.+||..+..- ..+... .... .+++.. ++++++.|+. ...+.+||+ .+.+-...-. ... ..
T Consensus 168 ~~v~~yd~~~~~W--~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~ 244 (357)
T 2uvk_A 168 KFLLSFDPSTQQW--SYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVA 244 (357)
T ss_dssp CEEEEEETTTTEE--EEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCB
T ss_pred ccEEEEeCCCCcE--EECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccc
Confidence 5799999977652 222211 1111 233333 5666676663 335778887 4433222111 111 11
Q ss_pred EEEEEecCCCEEEEEEcC----------------------CeEEEEECCCC
Q 008356 126 SSLAFIDDDWILTAGTSN----------------------GRVVFYDIRGK 154 (568)
Q Consensus 126 tsLafsPdg~~LasGs~D----------------------G~V~VWDlrt~ 154 (568)
...+...++++++.|+.+ ..+.+||+.+.
T Consensus 245 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~ 295 (357)
T 2uvk_A 245 GGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNG 295 (357)
T ss_dssp SCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC--
T ss_pred cceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCC
Confidence 222223356777777642 25788998865
No 342
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.19 E-value=30 Score=38.18 Aligned_cols=191 Identities=9% Similarity=0.030 Sum_probs=109.6
Q ss_pred CCCEEEEEEC-CCcEEEEECCCCceeEEeeCCCCCcEEEEEEc--cCCCeEEEEEeCC-------CeE---------EEE
Q 008356 5 KDEHLASISL-SGDLILHNLASGAKAAELKDPNEQVLRVLDYS--RNSRHLLVTAGDD-------GTL---------HLW 65 (568)
Q Consensus 5 dG~~LasGs~-DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafs--pdg~~lLaTgs~D-------GtV---------~VW 65 (568)
||++|..-.. +..|...++...++-..+..+....+..++|- |+.. +++++++. |.. -+|
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~-yv~~~~e~~~P~pndg~~~~~~~~~~y~~f 219 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTK-YVFANAEFIIPHPNDGKVFDLQDENSYTMY 219 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCC-EEEEEECSCEESSCSSSCCCTTSTTEEEEE
T ss_pred eeEEEEEecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCcc-EEEecceeeccCCCCCcccccCChhhceEE
Confidence 6778887764 56788999998888877777788889999987 5666 66666543 221 111
Q ss_pred ---ECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCC---------------eEE---------------------
Q 008356 66 ---DTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDK---------------KLY--------------------- 106 (568)
Q Consensus 66 ---Dl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DG---------------tV~--------------------- 106 (568)
|..+.+...+.+. ....-.+...+++++.++.+.+. .|.
T Consensus 220 ~~iD~~tm~v~~Qv~v--~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g 297 (638)
T 3sbq_A 220 NAIDAETMEMAFQVIV--DGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGD 297 (638)
T ss_dssp EEEETTTCSEEEEEEE--SSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTT
T ss_pred EEEcCCccEEEEEEEc--CCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECC
Confidence 1112211111111 11222344456777776655421 233
Q ss_pred ----EEECCC----C-ceeeEeecCCCeEEEEEecCCCEEEEEEc-CCeEEEEECCCCC--------CceEE-EeecCCC
Q 008356 107 ----TYDPGS----R-RPSSCITYEAPFSSLAFIDDDWILTAGTS-NGRVVFYDIRGKP--------QPLTV-LRACSSS 167 (568)
Q Consensus 107 ----IWDlrt----~-~~v~~~~h~~~ItsLafsPdg~~LasGs~-DG~V~VWDlrt~~--------~~v~~-l~~~~h~ 167 (568)
+.|.+. + ..+..+........+..+|||+++++++. +.+|.|+|.+... .+... .....-.
T Consensus 298 ~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G 377 (638)
T 3sbq_A 298 SKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG 377 (638)
T ss_dssp CCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC
T ss_pred CCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC
Confidence 444433 1 12222333444557889999999988774 7889999998411 01111 1111122
Q ss_pred CCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 168 EAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 168 ~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
-.....+|.++| ..+.+.-.|..|..|++..
T Consensus 378 lGPlHt~Fd~~G------------~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 378 LGPLHTTFDGRG------------NAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp SCEEEEEECSSS------------EEEEEETTTTEEEEEEHHH
T ss_pred CcccEEEECCCC------------ceEeeeeecceEEEEeccH
Confidence 345667888754 3344445689999998753
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=88.88 E-value=2 Score=48.23 Aligned_cols=147 Identities=13% Similarity=0.114 Sum_probs=79.6
Q ss_pred CCCEEEEEECC------CcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCC--eEEEEECCCCCceeEE
Q 008356 5 KDEHLASISLS------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDG--TLHLWDTTGRSPKVSW 76 (568)
Q Consensus 5 dG~~LasGs~D------G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DG--tV~VWDl~t~~~~v~~ 76 (568)
+++.++.||.+ ..+.+||+.+.+-...-.......-.+++...++. +++.|+.++ .+.+||..+.. ...
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~--W~~ 527 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGN-VLILGGVTEGPAMLLYNVTEEI--FKD 527 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSC-EEEECCBCSSCSEEEEETTTTE--EEE
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCE-EEEECCCCCCCCEEEEECCCCc--eEE
Confidence 56667777654 35888998765422111111111112233323555 778887654 69999997765 222
Q ss_pred ecc------CCCCeEEEEEcCC-CCEEEEEeC--C-----CeEEEEECCCCc------eeeEee--cCCC-eEEEEEecC
Q 008356 77 LKQ------HSAPTAGISFSSD-DKIIASVGL--D-----KKLYTYDPGSRR------PSSCIT--YEAP-FSSLAFIDD 133 (568)
Q Consensus 77 l~~------H~~~VtslafsPd-g~~LaSgs~--D-----GtV~IWDlrt~~------~v~~~~--h~~~-ItsLafsPd 133 (568)
+.. ......++.+..+ +++++.|+. + ..+.+||+.+.+ -..... .... -.+++...+
T Consensus 528 ~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~ 607 (695)
T 2zwa_A 528 VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITP 607 (695)
T ss_dssp CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEET
T ss_pred ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCC
Confidence 221 1111233555554 667777765 2 468999998876 111111 1111 123333334
Q ss_pred CCEEEEEEcC--------CeEEEEECCCC
Q 008356 134 DWILTAGTSN--------GRVVFYDIRGK 154 (568)
Q Consensus 134 g~~LasGs~D--------G~V~VWDlrt~ 154 (568)
+++++.|+.+ ..|.+||+.+.
T Consensus 608 ~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 608 RKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp TEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred CEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 6777787743 45899999875
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=88.66 E-value=3.9 Score=49.83 Aligned_cols=201 Identities=10% Similarity=0.122 Sum_probs=113.9
Q ss_pred ccCCCCEEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccC-
Q 008356 2 YNCKDEHLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQH- 80 (568)
Q Consensus 2 fSpdG~~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H- 80 (568)
.||..+.||.-. ..+++|||+++...++.+.- ...++. -+|-.... |+..+ +..|+-|++.+...+++.+..|
T Consensus 73 MnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~Vvf-WkWis~~~--l~lVT-~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 73 MNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTF-WKWISLNT--VALVT-DNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred cCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceE-EEecCCCe--eEEEc-CCeEEEeccCCCCccHHHHhcch
Confidence 367777777664 67899999998888777764 344444 57776543 44433 3679999997655555555555
Q ss_pred ---CCCeEEEEEcCCCCEEEEEe-------CCCeEEEEECCCCceeeEeecCCCeEEEEEec--C-CCEEEEEEc---CC
Q 008356 81 ---SAPTAGISFSSDDKIIASVG-------LDKKLYTYDPGSRRPSSCITYEAPFSSLAFID--D-DWILTAGTS---NG 144 (568)
Q Consensus 81 ---~~~VtslafsPdg~~LaSgs-------~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsP--d-g~~LasGs~---DG 144 (568)
...|..-..+++.++++..| -.|.+.+|..+.+.....-+|.+....+.... . ..+++.+.. .+
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~ 226 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGG 226 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCc
Confidence 45677777788888887655 24678888887654433334444443333321 1 123332222 26
Q ss_pred eEEEEECCCCCCceEEEeecCCCCCeeEEEEccCC--CeEEEeccCCCCeEEEEecCCCcEEcCCCCCCCc
Q 008356 145 RVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAK--PVFIDETTCKAETALLGGAVGDSILMPDPLPSVT 213 (568)
Q Consensus 145 ~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg--~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~~ 213 (568)
+++|-++........ .-......+-|.|+. .+-+.-.-+....+++--+.-|.|.++|+.....
T Consensus 227 kLhi~Ei~~~~~~~~-----~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 227 KLHIIEVGTPPTGNQ-----PFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTC 292 (1630)
T ss_pred eEEEEecCCCccCCC-----CCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchh
Confidence 899998854310000 111112334444431 1111111112233344445589999999987654
No 345
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=87.58 E-value=11 Score=40.34 Aligned_cols=141 Identities=11% Similarity=0.114 Sum_probs=96.2
Q ss_pred CCCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEE
Q 008356 58 DDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWIL 137 (568)
Q Consensus 58 ~DGtV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~L 137 (568)
++..|.|-|+.......+.-.. .-+.-.+|..+.|+.-. ..++.++|+++.+.+..+.....|.--.|-.+ +.|
T Consensus 46 ~~~~vvIiDl~~~~~~~rrpi~----AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~-~~l 119 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRPIS----ADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTV 119 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEECC----CSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEET-TEE
T ss_pred CCCeEEEEECCCCCcceecccc----cceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCC-CeE
Confidence 3347889999776543332221 23345688778777665 67899999999999988887778888888765 456
Q ss_pred EEEEcCCeEEEEECCCCCCceEEEeecC--CCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 138 TAGTSNGRVVFYDIRGKPQPLTVLRACS--SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 138 asGs~DG~V~VWDlrt~~~~v~~l~~~~--h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
+..+ +..|+-|++.....|.+++..+. ....|..-..+++.+|++..+-...... ..|.+.+|.+..
T Consensus 120 ~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~-----v~G~mQLYS~er 188 (494)
T 1bpo_A 120 ALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNR-----VVGAMQLYSVDR 188 (494)
T ss_dssp EEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTE-----EEEEEEEEESTT
T ss_pred EEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCc-----ccceEEEeeccc
Confidence 6554 46899999988778888887432 2356778888999999765532211111 146677776643
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=86.30 E-value=3.8 Score=45.21 Aligned_cols=102 Identities=9% Similarity=-0.019 Sum_probs=68.7
Q ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEECCCC------C------ceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEE
Q 008356 40 LRVLDYSRNSRHLLVTAGDDGTLHLWDTTGR------S------PKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYT 107 (568)
Q Consensus 40 Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~------~------~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~I 107 (568)
...+.++|+|+++++.|--+.+|.|+|++.. + ..+.... -.-.....+|.++|+-..+.--|..|..
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence 3457899999977777778999999998631 1 1122222 3345677899999966666679999999
Q ss_pred EECCCC----------ceeeEeecCCCeEEEEE------ecCCCEEEEEEc
Q 008356 108 YDPGSR----------RPSSCITYEAPFSSLAF------IDDDWILTAGTS 142 (568)
Q Consensus 108 WDlrt~----------~~v~~~~h~~~ItsLaf------sPdg~~LasGs~ 142 (568)
|++... ..+..+.....+-.+.- .++|++|++...
T Consensus 404 Wni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK 454 (638)
T 3sbq_A 404 WNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSK 454 (638)
T ss_dssp EEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEES
T ss_pred EeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecc
Confidence 998642 23334443444444444 468999998754
No 347
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=84.61 E-value=35 Score=34.18 Aligned_cols=200 Identities=11% Similarity=0.021 Sum_probs=108.5
Q ss_pred CCCCEEEEEECCCcEEEEECCCCc-------eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCce---
Q 008356 4 CKDEHLASISLSGDLILHNLASGA-------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPK--- 73 (568)
Q Consensus 4 pdG~~LasGs~DG~V~VWDl~tg~-------~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~--- 73 (568)
++..++++.+.+|.|+-..+..-+ -+..+.-...+.+..+......+ .++..+..|.++-+....-...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~-~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHD-YLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTC-EEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCC-EEEEEECCCeEEEEEHHHCCCCCcc
Confidence 466788999999999988764321 11122212334444444444444 5777788999877765321100
Q ss_pred --------eEEeccCCCCeEEEEEcC---CCCEEEEEeCCCeEEEEECCC-------CceeeEeecCCCeEEEEEecCCC
Q 008356 74 --------VSWLKQHSAPTAGISFSS---DDKIIASVGLDKKLYTYDPGS-------RRPSSCITYEAPFSSLAFIDDDW 135 (568)
Q Consensus 74 --------v~~l~~H~~~VtslafsP---dg~~LaSgs~DGtV~IWDlrt-------~~~v~~~~h~~~ItsLafsPdg~ 135 (568)
...+. ..+.|.++...+ +..+|+..+..|.++...+.. +.....+...+.+..+....+..
T Consensus 85 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred CCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 01122 233455554332 467888999999999887743 22222233456677666666667
Q ss_pred EEEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 136 ILTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 136 ~LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
.++..+.+|.+..+....-.. .. .....|..+.+.++...+... -..++..++..+..|.++..++..+.
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~----~g--R~~~Gv~~i~L~~~d~vv~~~-~v~~~~~l~~vt~~G~~kr~~~~e~~ 233 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRL----TN--RGTQGVCGMKLKEGDLFVKVL-SVKENPYLLIVSENGYGKRLNMSKIS 233 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCB----CC--TTBCCEECCCCCTTCCEEEEE-ECTTCSEEEEEETTSEEEEEEGGGSC
T ss_pred EEEEEeCCCcEEEEEHHHccc----cC--CCCCCeEeEEeCCCCEEEEEE-EECCCCeEEEEECCCceEEEEHHHhc
Confidence 888999999999998764210 00 112233334433322222111 11122334455557777777665443
No 348
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=80.82 E-value=3.5 Score=42.44 Aligned_cols=104 Identities=13% Similarity=0.100 Sum_probs=63.1
Q ss_pred EEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEc--CCCCEEEEE--eCCCeEEEEECCCCceeeEee-----cC
Q 008356 52 LLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFS--SDDKIIASV--GLDKKLYTYDPGSRRPSSCIT-----YE 122 (568)
Q Consensus 52 lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~Vtslafs--Pdg~~LaSg--s~DGtV~IWDlrt~~~v~~~~-----h~ 122 (568)
+++.++.||.|+-+|..+++.+.+.-.....++....-. +.+..++.+ ..||.|+.+|..+|.....+. ..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 688999999999999988874322211111222221100 112244444 589999999998886554442 12
Q ss_pred CCeEE---EEE-e----cCCCEEEEEEcCCeEEEEECCCCC
Q 008356 123 APFSS---LAF-I----DDDWILTAGTSNGRVVFYDIRGKP 155 (568)
Q Consensus 123 ~~Its---Laf-s----Pdg~~LasGs~DG~V~VWDlrt~~ 155 (568)
.++.. ..+ . ..+..+++|+.+|++...|+++++
T Consensus 92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~ 132 (339)
T 2be1_A 92 SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGE 132 (339)
T ss_dssp CSEEEECC----------CCEEEEECEEEEEEEEEETTTCC
T ss_pred cccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCc
Confidence 22221 000 0 145688999999999999999985
No 349
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=79.19 E-value=64 Score=33.51 Aligned_cols=164 Identities=11% Similarity=0.122 Sum_probs=96.6
Q ss_pred cEEEEECCCC--ceeEEeeCC-----CCCcEEEEEEc---cC---CCeEEEEEe-CCCeEEEEECCCCCceeEEec----
Q 008356 17 DLILHNLASG--AKAAELKDP-----NEQVLRVLDYS---RN---SRHLLVTAG-DDGTLHLWDTTGRSPKVSWLK---- 78 (568)
Q Consensus 17 ~V~VWDl~tg--~~v~~l~~~-----h~~~Vs~Lafs---pd---g~~lLaTgs-~DGtV~VWDl~t~~~~v~~l~---- 78 (568)
+|.+||+.+. +.++.+.-+ ....+..+.+. +. ++.+++.+. ..+-|.|||+.+++. .+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~s-wRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDS-WNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEE-EEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcE-EEEccCCCc
Confidence 6889999999 888777642 23457778887 21 133444444 467899999987652 22221
Q ss_pred ----------cC----CCCeEEEEEcCC----CCEEEEEeCCC-eEEEEE---CCCC---ceeeEeecCC---CeEEEEE
Q 008356 79 ----------QH----SAPTAGISFSSD----DKIIASVGLDK-KLYTYD---PGSR---RPSSCITYEA---PFSSLAF 130 (568)
Q Consensus 79 ----------~H----~~~VtslafsPd----g~~LaSgs~DG-tV~IWD---lrt~---~~v~~~~h~~---~ItsLaf 130 (568)
+. ...|..|+++|+ ++.|.-....+ .++-.. ++.. ..+..++..+ ....+++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 10 236888899887 67777666555 333332 2222 2333444333 3445677
Q ss_pred e-cCCCEEEEEEcCCeEEEEECCC-CC--CceEEEeecCCCCCeeEEEEccCCCe
Q 008356 131 I-DDDWILTAGTSNGRVVFYDIRG-KP--QPLTVLRACSSSEAVSSLCWQRAKPV 181 (568)
Q Consensus 131 s-Pdg~~LasGs~DG~V~VWDlrt-~~--~~v~~l~~~~h~~~VtsLafspdg~~ 181 (568)
. .+|.++++--.+..|..|+.++ .- ....++..-..-..+..+.+..+|..
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~L 337 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGL 337 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCE
T ss_pred eCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeE
Confidence 6 5677777777888999999986 21 12233322123345677777665443
No 350
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=78.52 E-value=53 Score=32.24 Aligned_cols=145 Identities=12% Similarity=0.140 Sum_probs=87.5
Q ss_pred CCCEEEEEECCCcEEEEECCCC------ceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCc------
Q 008356 5 KDEHLASISLSGDLILHNLASG------AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSP------ 72 (568)
Q Consensus 5 dG~~LasGs~DG~V~VWDl~tg------~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~------ 72 (568)
+..+++..+.+|.|+-..+..- .....++ ..+.+-.+......+ .++..+.+|.++.++...-..
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lk--egD~l~~~~~~~~~~-~ill~T~~G~~~r~~~~eip~~gR~a~ 155 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLT--EGDEVVSIASSVDET-HILLFTKKGRVARFSVREVPPSTPGAR 155 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCC--TTCCEEEEEECCSSC-EEEEEETTSEEEEEEGGGSCBCCTTCC
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecC--CCCEEEEEEEeCCCC-EEEEEECCCEEEEEEhhhCCCcCCCCC
Confidence 4578899999999999886542 1112233 334444444444444 577788999998887632110
Q ss_pred eeE--EeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC-------CceeeEeecCCCeEEEEEecCCCEEEEEEcC
Q 008356 73 KVS--WLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS-------RRPSSCITYEAPFSSLAFIDDDWILTAGTSN 143 (568)
Q Consensus 73 ~v~--~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt-------~~~v~~~~h~~~ItsLafsPdg~~LasGs~D 143 (568)
-+. .+. ..+.|..+....++..++..+..|.++...+.. ++-+..+...+.+..+....+...++..+.+
T Consensus 156 Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~i~~~t~~ 234 (276)
T 3no0_A 156 GVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVELLITTKN 234 (276)
T ss_dssp CEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEEEEEEETT
T ss_pred CEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCEEEEEcCC
Confidence 011 122 235566666556677899999999998887632 2222223334455555444444567777888
Q ss_pred CeEEE--EECCC
Q 008356 144 GRVVF--YDIRG 153 (568)
Q Consensus 144 G~V~V--WDlrt 153 (568)
|.+.. ++...
T Consensus 235 G~~ir~~~~~~~ 246 (276)
T 3no0_A 235 GKAFYDKINQKD 246 (276)
T ss_dssp SCEEEEEEEGGG
T ss_pred CeEEEeeeCHHH
Confidence 88877 77653
No 351
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=77.49 E-value=63 Score=32.57 Aligned_cols=139 Identities=10% Similarity=-0.039 Sum_probs=70.3
Q ss_pred CEEEEEECCCcEEEEECCC-CceeEEe-eCCCCCcEEEEEEccCCCeEEEEEeCCC----eEEEEECCCCCceeEEecc-
Q 008356 7 EHLASISLSGDLILHNLAS-GAKAAEL-KDPNEQVLRVLDYSRNSRHLLVTAGDDG----TLHLWDTTGRSPKVSWLKQ- 79 (568)
Q Consensus 7 ~~LasGs~DG~V~VWDl~t-g~~v~~l-~~~h~~~Vs~Lafspdg~~lLaTgs~DG----tV~VWDl~t~~~~v~~l~~- 79 (568)
..|.+|...| +.+++... ++.-..+ .......|.+|++.|.....|+++...| .|...+ +.+. ....+..
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~-tW~~~~~~ 99 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGG-NWTEATRP 99 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTS-CCEECSBC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCC-CceECCcc
Confidence 4677788777 55555432 2222222 1123467899999983222355555555 444332 2222 1111111
Q ss_pred -------------CCCCeEEEEEcC-C-CCEEEEEeCCCeEEEEECCCCceeeEee--------------------cCCC
Q 008356 80 -------------HSAPTAGISFSS-D-DKIIASVGLDKKLYTYDPGSRRPSSCIT--------------------YEAP 124 (568)
Q Consensus 80 -------------H~~~VtslafsP-d-g~~LaSgs~DGtV~IWDlrt~~~v~~~~--------------------h~~~ 124 (568)
+...|.++++.| + ...|+.+...+.|...+-. ++.-..+. ....
T Consensus 100 ~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~Dg-G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~ 178 (394)
T 3b7f_A 100 PAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDH-GASWEPVAGFNDHPMRRAWTGGEQDGTPDGPK 178 (394)
T ss_dssp CCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESST-TSBCEECHHHHTCTTHHHHHCCC----CCCCE
T ss_pred ccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCC-CCCeEECcCccCCccccccccccccCCCCCCc
Confidence 112477889987 3 5666666666666555322 22111111 1234
Q ss_pred eEEEEEecC-CCEEEEEEcCCeEEEE
Q 008356 125 FSSLAFIDD-DWILTAGTSNGRVVFY 149 (568)
Q Consensus 125 ItsLafsPd-g~~LasGs~DG~V~VW 149 (568)
+.+|.++|. ...|+++..++.|...
T Consensus 179 i~~i~~d~~~~~~l~vg~~~ggl~~s 204 (394)
T 3b7f_A 179 MHSILVDPRDPKHLYIGMSSGGVFES 204 (394)
T ss_dssp EEEEEECTTCTTCEEEEEETBEEEEE
T ss_pred eeEEEECCCCCCEEEEEECCCCEEEE
Confidence 788999883 4556666555555444
No 352
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=75.73 E-value=63 Score=31.68 Aligned_cols=143 Identities=16% Similarity=0.077 Sum_probs=85.1
Q ss_pred CEEEEEECCCcEEEEEC---CCCceeEEeeCCCCCcEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCC-----ceeEEe
Q 008356 7 EHLASISLSGDLILHNL---ASGAKAAELKDPNEQVLRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRS-----PKVSWL 77 (568)
Q Consensus 7 ~~LasGs~DG~V~VWDl---~tg~~v~~l~~~h~~~Vs~Lafsp-dg~~lLaTgs~DGtV~VWDl~t~~-----~~v~~l 77 (568)
++|+.-..+|.++--.+ ..+.... + -..++.|..+.... ++. +++..+.+|.++...+..-. .....+
T Consensus 36 ~~ll~fT~~G~v~~~~~~~lp~~~~~~-l-l~~~e~i~~v~~~~~~~~-~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~l 112 (276)
T 3no0_A 36 EGLFLVSNRGRVYWIAGSQALQGSKVS-L-KSREEKIVGAFIREKFGN-RLLLATKKGYVKKIPLAEFEYKAQGMPIIKL 112 (276)
T ss_dssp SCEEEEETTSEEEEECSHHHHTSEECC-C-SSTTCCEEEEEEGGGSCS-EEEEEETTSEEEEEEGGGTTTCSTTEECSCC
T ss_pred CEEEEEcCCCeEEEEEhhhCccCcccc-c-CCCCCEEEEEECCcCCCC-EEEEEeCCCEEEEEEHHHhhhhcCCeEEEec
Confidence 34555666776665432 2221111 2 22344444443321 344 78899999999999875421 011122
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC---------CceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEE
Q 008356 78 KQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS---------RRPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVF 148 (568)
Q Consensus 78 ~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt---------~~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~V 148 (568)
+. .+.+..+........|+..+..|.++.+.... |.....+.....|..+...+++..++..+..|.++.
T Consensus 113 ke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr 191 (276)
T 3no0_A 113 TE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKK 191 (276)
T ss_dssp CT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEE
T ss_pred CC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEE
Confidence 22 34566665555667888899999988886532 111122344566777666666778999999999999
Q ss_pred EECCC
Q 008356 149 YDIRG 153 (568)
Q Consensus 149 WDlrt 153 (568)
..+..
T Consensus 192 ~~~~e 196 (276)
T 3no0_A 192 ISHEE 196 (276)
T ss_dssp EEGGG
T ss_pred eEHHH
Confidence 88754
No 353
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=75.38 E-value=69 Score=31.90 Aligned_cols=201 Identities=7% Similarity=0.031 Sum_probs=104.6
Q ss_pred CCCCEEEEEECCCcEEEEECCCCce-------eEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEEC---CCCCc-
Q 008356 4 CKDEHLASISLSGDLILHNLASGAK-------AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDT---TGRSP- 72 (568)
Q Consensus 4 pdG~~LasGs~DG~V~VWDl~tg~~-------v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl---~t~~~- 72 (568)
|+..++++.+.+|.|+--.+.+-+. +..+.-...+.+..+......+ .|+..+..|.++-+.. .....
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~-~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHD-HILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC--------------------CCEEEEEEEETTC-EEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCC-EEEEEECCCEEEEEEhhHCcCCCCC
Confidence 4567889999999998877643221 1111111233343344444444 4666788898766654 22110
Q ss_pred -e-e---EEec-cCCCCeEEEEEc---CCCCEEEEEeCCCeEEEEECCC-------CceeeEeecCCCeEEEEEecCCCE
Q 008356 73 -K-V---SWLK-QHSAPTAGISFS---SDDKIIASVGLDKKLYTYDPGS-------RRPSSCITYEAPFSSLAFIDDDWI 136 (568)
Q Consensus 73 -~-v---~~l~-~H~~~Vtslafs---Pdg~~LaSgs~DGtV~IWDlrt-------~~~v~~~~h~~~ItsLafsPdg~~ 136 (568)
. . ..+. .....|..+... .++.+++..+.+|.++...+.. +.....+...+.+..+....+...
T Consensus 80 a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~~~~~~~~~~ 159 (307)
T 1zi0_A 80 ARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIGVDLTSGEDE 159 (307)
T ss_dssp SCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEEEEEECTTCE
T ss_pred CCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEEEEEeCCCCE
Confidence 0 1 0111 233456655442 2566899999999999987642 111111233466666666656677
Q ss_pred EEEEEcCCeEEEEECCCCCCceEEEeecCCCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCCCC
Q 008356 137 LTAGTSNGRVVFYDIRGKPQPLTVLRACSSSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLPSV 212 (568)
Q Consensus 137 LasGs~DG~V~VWDlrt~~~~v~~l~~~~h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~~~ 212 (568)
|+..+.+|.+..++...-.. .. .....|..+.+.++...+... ...++..++..+..|.++..++..+.
T Consensus 160 i~l~T~~G~~irf~~~~v~~----~g--r~a~Gv~~i~L~~~d~Vv~~~-~~~~~~~ll~~T~~G~~Kr~~~~e~~ 228 (307)
T 1zi0_A 160 VMLFSAEGKVVRFKESSVRA----MG--CNTTGVRGIRLGEGDKVVSLI-VPRGDGAILTATQNGYGKRTAVAEYP 228 (307)
T ss_dssp EEEEETTSEEEEEEGGGSCB----CC--TTCCCEECCCCCTTCCEEEEE-CCCSSCEEEEEETTSEEEEECGGGSC
T ss_pred EEEECCCCcEEEEEHHHcCc----cC--CCCCCeEeEEeCCCCEEEEEE-EecCCCEEEEEEcCCceEEEEHHHhc
Confidence 88899999998887753210 10 111233333443333332221 11223345555667888877765544
No 354
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=74.26 E-value=77 Score=31.96 Aligned_cols=146 Identities=15% Similarity=0.110 Sum_probs=88.6
Q ss_pred CCCEEEEEECCCcEEEEECCCC-------ceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC--CCCce--
Q 008356 5 KDEHLASISLSGDLILHNLASG-------AKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT--GRSPK-- 73 (568)
Q Consensus 5 dG~~LasGs~DG~V~VWDl~tg-------~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~--t~~~~-- 73 (568)
+..+++..+.+|.|+-..+..- .....++. .+..+. +....... .++..+.+|.+..+... .-...
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~-~~~~~~~d-~ill~T~~G~~~rf~~~~~eip~~gr 184 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVG-AVLCSAGD-DLLLVSANGQSIRFSATDEALRPMGR 184 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEE-EEEECTTC-EEEEEETTSEEEEEECCTTTSCCCCT
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEE-EEEecCCC-EEEEEECCCeEEEEECcccccCcCCc
Confidence 4678999999999998876531 11222332 333444 44444444 57777889998888776 21110
Q ss_pred ----eEEec-cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------ceeeEee--c-CCCeEEEEEecCCCEEE
Q 008356 74 ----VSWLK-QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSR-------RPSSCIT--Y-EAPFSSLAFIDDDWILT 138 (568)
Q Consensus 74 ----v~~l~-~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~-------~~v~~~~--h-~~~ItsLafsPdg~~La 138 (568)
+..+. .....|.++...+++.+|+.++..|.++.-.+..- +-+..+. . .+.+..+....+...++
T Consensus 185 ~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~ 264 (327)
T 3uc1_A 185 ATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELY 264 (327)
T ss_dssp TSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEE
T ss_pred CCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEE
Confidence 11111 23456777776666778999999999988876431 2222222 2 34555555555556777
Q ss_pred EEEcCCeEEEEECCC
Q 008356 139 AGTSNGRVVFYDIRG 153 (568)
Q Consensus 139 sGs~DG~V~VWDlrt 153 (568)
..+.+|.+.-++...
T Consensus 265 l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 265 AVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEGGGCEEEEEGGG
T ss_pred EEcCCCeEEEEehhh
Confidence 788888888887653
No 355
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=71.12 E-value=98 Score=31.82 Aligned_cols=148 Identities=12% Similarity=0.120 Sum_probs=89.1
Q ss_pred cCCCCEEEEEECCCcEEEEECCC-------CceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC---CC--
Q 008356 3 NCKDEHLASISLSGDLILHNLAS-------GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT---GR-- 70 (568)
Q Consensus 3 SpdG~~LasGs~DG~V~VWDl~t-------g~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~---t~-- 70 (568)
-++..++++.+.+|.|+--.+.. ++-+..+.-...+.+..+....... .|+..+..|.++-+... ..
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d-~ll~fT~~G~~~~~~~~eip~~~r 82 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHD-TLLTFTSSGKVFWLPVHQLPEAGS 82 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTC-EEEEEETTSEEEEEEGGGSCBCCT
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCC-EEEEEeCCCeEEEEEHHHCcCCCc
Confidence 46778999999999999865431 1222233322445555455554444 56667788887766542 11
Q ss_pred ----CceeE--EeccCCCCeEEEEEcC---CCCEEEEEeCCCeEEEEECCCC-------ceeeEeecCCCeEEEEEecCC
Q 008356 71 ----SPKVS--WLKQHSAPTAGISFSS---DDKIIASVGLDKKLYTYDPGSR-------RPSSCITYEAPFSSLAFIDDD 134 (568)
Q Consensus 71 ----~~~v~--~l~~H~~~VtslafsP---dg~~LaSgs~DGtV~IWDlrt~-------~~v~~~~h~~~ItsLafsPdg 134 (568)
..... .+. ....|.++.... +..+|+.++..|.++...+..- .....+...+.+..+......
T Consensus 83 ~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~ 161 (370)
T 3l6v_A 83 NARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGD 161 (370)
T ss_dssp TSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSC
T ss_pred ccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCC
Confidence 10011 122 234565554432 4568999999999998876431 111222345566666666666
Q ss_pred CEEEEEEcCCeEEEEECC
Q 008356 135 WILTAGTSNGRVVFYDIR 152 (568)
Q Consensus 135 ~~LasGs~DG~V~VWDlr 152 (568)
..|+..+.+|.+..++..
T Consensus 162 ~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 162 RDVLLFASNGKTVRFGES 179 (370)
T ss_dssp CEEEEEETTSEEEEEEGG
T ss_pred ceEEEEeCCCeEEEEEcc
Confidence 788889999998888765
No 356
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=71.06 E-value=90 Score=31.36 Aligned_cols=147 Identities=10% Similarity=0.085 Sum_probs=86.3
Q ss_pred CCCCEEEEEECCCcEEEEECCC----CceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECC---CCC-----
Q 008356 4 CKDEHLASISLSGDLILHNLAS----GAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTT---GRS----- 71 (568)
Q Consensus 4 pdG~~LasGs~DG~V~VWDl~t----g~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~---t~~----- 71 (568)
++..++++.+.+|.|+--.+.. +.....++ ..+.+..+......+ .|+..+..|.++-+... ...
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lk--e~D~l~~~~~~~t~d-~ll~fT~~Gr~~~~~~~elp~~~r~a~G 79 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMK--DTDRLLAMLEMNTKD-VLLLFTNKGNYLYCPVHELPDIRWKDLG 79 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCC--TTCCEEEEEEEETTS-EEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccC--CCCEEEEEEEECCCC-EEEEEECCCEEEEEEHHHCcCCCCCCCC
Confidence 5677889999999999876531 11111233 234444344444444 56667888987666552 111
Q ss_pred -ceeEEec-cCCCCeEEEEEcC---CCCEEEEEeCCCeEEEEECCCC------ceee--EeecCCCeEEEEEecCCCEEE
Q 008356 72 -PKVSWLK-QHSAPTAGISFSS---DDKIIASVGLDKKLYTYDPGSR------RPSS--CITYEAPFSSLAFIDDDWILT 138 (568)
Q Consensus 72 -~~v~~l~-~H~~~VtslafsP---dg~~LaSgs~DGtV~IWDlrt~------~~v~--~~~h~~~ItsLafsPdg~~La 138 (568)
+....+. .....|..+.... ++.+++.++.+|.++...+..- +-+. .+...+.+..+........|+
T Consensus 80 ~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~ 159 (323)
T 1wp5_A 80 QHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELF 159 (323)
T ss_dssp EEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEE
T ss_pred cChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEE
Confidence 0001111 1234455543333 2668999999999999876421 1122 223446666666665667888
Q ss_pred EEEcCCeEEEEECCC
Q 008356 139 AGTSNGRVVFYDIRG 153 (568)
Q Consensus 139 sGs~DG~V~VWDlrt 153 (568)
..+.+|.+..++...
T Consensus 160 l~T~~G~~irf~~~e 174 (323)
T 1wp5_A 160 LVTHNGYALWFDESE 174 (323)
T ss_dssp EEETTSEEEEEEGGG
T ss_pred EEeCCCcEEEEEHHH
Confidence 999999999888754
No 357
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=68.93 E-value=1e+02 Score=31.08 Aligned_cols=114 Identities=16% Similarity=0.168 Sum_probs=73.2
Q ss_pred CcEEEEEEcc--CCCeEEEEEeCCCeEEEEECCCCCc------eeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEE
Q 008356 38 QVLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGRSP------KVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYD 109 (568)
Q Consensus 38 ~~Vs~Lafsp--dg~~lLaTgs~DGtV~VWDl~t~~~------~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWD 109 (568)
..+..+.+.. +.. +++.++.+|.|+.-.+..-.. ....++. .+.+..+........|+..+..|.+..+.
T Consensus 96 ~i~~~~~~~~~~~e~-~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 96 RIAQVIQIRGYTDAP-YLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CEEEEEEESSTTSSS-EEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred EEEEEEEeccCCCCC-EEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 3444444443 344 799999999999988743211 1112333 34455555555667888889999988887
Q ss_pred CC--C----Cc-----eeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 008356 110 PG--S----RR-----PSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 110 lr--t----~~-----~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt 153 (568)
.. . ++ ....+.....|..+...+++.+|+..+..|.++.-.+..
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e 228 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEE 228 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred CcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHH
Confidence 66 2 11 111223456677777766677999999999999887654
No 358
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=68.89 E-value=22 Score=43.55 Aligned_cols=141 Identities=11% Similarity=0.124 Sum_probs=93.1
Q ss_pred CCCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeecCCCeEEEEEecCCCEE
Q 008356 58 DDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITYEAPFSSLAFIDDDWIL 137 (568)
Q Consensus 58 ~DGtV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h~~~ItsLafsPdg~~L 137 (568)
+...|.|-|+..+....+. .-..-+.-.+|..+.|+.-. ..++.|+|+++...+..+.....|.--.|-.+ +.|
T Consensus 46 ~~~~vvIidl~~~~~~~rr----pi~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e~VvfWkWis~-~~l 119 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRR----PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-NTV 119 (1630)
T ss_pred CCceEEEEECCCCCCcccc----cccchhhccCCCcceEEEec-CCeEEEeehHHhhhhcccccCCCceEEEecCC-Cee
Confidence 3347888898775532221 11122344678777666654 67899999999888888877778888888755 445
Q ss_pred EEEEcCCeEEEEECCCCCCceEEEeecC--CCCCeeEEEEccCCCeEEEeccCCCCeEEEEecCCCcEEcCCCCC
Q 008356 138 TAGTSNGRVVFYDIRGKPQPLTVLRACS--SSEAVSSLCWQRAKPVFIDETTCKAETALLGGAVGDSILMPDPLP 210 (568)
Q Consensus 138 asGs~DG~V~VWDlrt~~~~v~~l~~~~--h~~~VtsLafspdg~~Las~s~ssd~~~Lls~s~Dg~V~VWDlr~ 210 (568)
+..+ +..|+-|++.+...|.+++..+. ....|.+-..+++.+|++..|-..... ...|.+.+|.+..
T Consensus 120 ~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~-----~v~G~mQLyS~er 188 (1630)
T 1xi4_A 120 ALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQN-----RVVGAMQLYSVDR 188 (1630)
T ss_pred EEEc-CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCC-----cccceeeeeeccc
Confidence 5554 35799999987667777765321 145677788899999977553322222 2367888887654
No 359
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=65.17 E-value=84 Score=33.29 Aligned_cols=104 Identities=19% Similarity=0.144 Sum_probs=58.4
Q ss_pred CCeEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc---eeeEe----e------cCCCeEEEEEecC----CCEEEEEEc-
Q 008356 82 APTAGISFSSDDK-IIASVGLDKKLYTYDPGSRR---PSSCI----T------YEAPFSSLAFIDD----DWILTAGTS- 142 (568)
Q Consensus 82 ~~VtslafsPdg~-~LaSgs~DGtV~IWDlrt~~---~v~~~----~------h~~~ItsLafsPd----g~~LasGs~- 142 (568)
.....|+|.|++. .|+++...|.|++++..... .+..+ . .+.....|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4467899999985 46666789999999754321 22211 1 1456789999996 433333322
Q ss_pred -C----------CeEEEEECCCC--C-----CceEEEee--cCCCCCeeEEEEccCCCeEEEe
Q 008356 143 -N----------GRVVFYDIRGK--P-----QPLTVLRA--CSSSEAVSSLCWQRAKPVFIDE 185 (568)
Q Consensus 143 -D----------G~V~VWDlrt~--~-----~~v~~l~~--~~h~~~VtsLafspdg~~Las~ 185 (568)
+ ..|.-|.+... . ....++.. .........|.|.|||.+.++.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~ 156 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIIL 156 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEE
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEe
Confidence 1 14555666431 0 11122221 1112235789999987665554
No 360
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=63.51 E-value=95 Score=36.04 Aligned_cols=37 Identities=22% Similarity=0.264 Sum_probs=32.5
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe
Q 008356 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI 119 (568)
Q Consensus 83 ~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~ 119 (568)
.+.+++..++..++++.+.|+++|+|++.+++++...
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4677777888899999999999999999999988765
No 361
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=63.37 E-value=1.3e+02 Score=30.24 Aligned_cols=108 Identities=11% Similarity=-0.058 Sum_probs=55.7
Q ss_pred cEEEEEEccCC-CeEEEEEeCCCeEEEEECCCCCceeEEecc-------------------CCCCeEEEEEcC-CCCEEE
Q 008356 39 VLRVLDYSRNS-RHLLVTAGDDGTLHLWDTTGRSPKVSWLKQ-------------------HSAPTAGISFSS-DDKIIA 97 (568)
Q Consensus 39 ~Vs~Lafspdg-~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~-------------------H~~~VtslafsP-dg~~La 97 (568)
.|.+|++.+.. ...++++...+-|...+-.... ...+.. ....|.+|.+.| +...|+
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S~DgG~t--W~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~ 193 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRSTDHGAS--WEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLY 193 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEESSTTSB--CEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEEcCCCCC--eEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEE
Confidence 57778888632 2246666666655544322222 222211 123578999998 445555
Q ss_pred EEeCCCeEEEEECCCCceeeEeec--------------CCCeEEEEEecC-CCEEEEEEcCCeEEEEE
Q 008356 98 SVGLDKKLYTYDPGSRRPSSCITY--------------EAPFSSLAFIDD-DWILTAGTSNGRVVFYD 150 (568)
Q Consensus 98 Sgs~DGtV~IWDlrt~~~v~~~~h--------------~~~ItsLafsPd-g~~LasGs~DG~V~VWD 150 (568)
.+..++.|...+-. ++.-..+.. ...+.+++++|+ ...|+++...+ |...+
T Consensus 194 vg~~~ggl~~s~Dg-G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~ 259 (394)
T 3b7f_A 194 IGMSSGGVFESTDA-GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMD 259 (394)
T ss_dssp EEEETBEEEEESST-TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEE
T ss_pred EEECCCCEEEECCC-CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeC
Confidence 55544545443321 221111110 124889999985 46777776544 54444
No 362
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=61.41 E-value=63 Score=34.28 Aligned_cols=103 Identities=12% Similarity=0.086 Sum_probs=58.7
Q ss_pred EEEEEEccCCCeEEEEEeCCCeEEEEECCCCC--ceeEEec---------cCCCCeEEEEEcCC----CCEEEEEeC--C
Q 008356 40 LRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS--PKVSWLK---------QHSAPTAGISFSSD----DKIIASVGL--D 102 (568)
Q Consensus 40 Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~--~~v~~l~---------~H~~~VtslafsPd----g~~LaSgs~--D 102 (568)
-..|+|.|++...|+++...|.|++++..... ..+..+. ........|+|+|+ +.+.++-+. +
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 35689999985235556789999999764331 1122221 11356789999995 333333221 1
Q ss_pred ----------CeEEEEECCCC----------ceeeEee---cCCCeEEEEEecCCCEEEEEEc
Q 008356 103 ----------KKLYTYDPGSR----------RPSSCIT---YEAPFSSLAFIDDDWILTAGTS 142 (568)
Q Consensus 103 ----------GtV~IWDlrt~----------~~v~~~~---h~~~ItsLafsPdg~~LasGs~ 142 (568)
..|.-|.+..+ +.+..+. .......|+|.|||++.++.+.
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 13444555421 1222221 2345689999999987666544
No 363
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=53.53 E-value=2.8e+02 Score=31.03 Aligned_cols=174 Identities=10% Similarity=0.041 Sum_probs=87.9
Q ss_pred ccCCCCEEEEE-ECC----CcEEEEECCCCceeEE-eeCCCCC------cEEEEEEccCCCeEEEEE----------eCC
Q 008356 2 YNCKDEHLASI-SLS----GDLILHNLASGAKAAE-LKDPNEQ------VLRVLDYSRNSRHLLVTA----------GDD 59 (568)
Q Consensus 2 fSpdG~~LasG-s~D----G~V~VWDl~tg~~v~~-l~~~h~~------~Vs~Lafspdg~~lLaTg----------s~D 59 (568)
++|++++++.+ +.. ..|+++|+++++.+.. +....+. ....++|..++ .++++. +..
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~-~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKD-TIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETT-EEEECCCCSTTCBCTTSSB
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCC-EEEEEeCCCCCCcCcCCCC
Confidence 78999887764 223 3699999999886631 1100011 11345787443 355532 123
Q ss_pred CeEEEEECCCCCce-eEEeccCCCCe-EEEEEcCCCC-----EEEEEeCC---CeEEEEECCC--CceeeEeecCCCeEE
Q 008356 60 GTLHLWDTTGRSPK-VSWLKQHSAPT-AGISFSSDDK-----IIASVGLD---KKLYTYDPGS--RRPSSCITYEAPFSS 127 (568)
Q Consensus 60 GtV~VWDl~t~~~~-v~~l~~H~~~V-tslafsPdg~-----~LaSgs~D---GtV~IWDlrt--~~~v~~~~h~~~Its 127 (568)
..|+.|.+-+.... ...+.+....+ .......+++ .+++.+.+ ..+++.|... ++.+... ......
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~- 293 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKIN-MPSDAT- 293 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECC-SCTTCE-
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEee-cCCcce-
Confidence 56899988554321 23333333333 2344455555 34444322 4567777654 3322222 122222
Q ss_pred EEEecCCCEEEEE----------EcCCeEEEEECCCC------CCceEEEeecCCCCCeeEEEEccC
Q 008356 128 LAFIDDDWILTAG----------TSNGRVVFYDIRGK------PQPLTVLRACSSSEAVSSLCWQRA 178 (568)
Q Consensus 128 LafsPdg~~LasG----------s~DG~V~VWDlrt~------~~~v~~l~~~~h~~~VtsLafspd 178 (568)
+....++.+++.. ...+.|.+.|+... ....+.+-.......+..+.|..+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 360 (711)
T 4hvt_A 294 LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD 360 (711)
T ss_dssp EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS
T ss_pred EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC
Confidence 2334455444422 24677999998763 122233222233456777787764
No 364
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=53.49 E-value=1.7e+02 Score=28.45 Aligned_cols=134 Identities=12% Similarity=0.094 Sum_probs=70.7
Q ss_pred EEEEEECCCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEE
Q 008356 8 HLASISLSGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGI 87 (568)
Q Consensus 8 ~LasGs~DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~Vtsl 87 (568)
+.+.-. ||.|+.|-......+. +.......|..|+...+ +.++. . ||.|+.|-.......- .-..-...|..|
T Consensus 35 h~~~l~-~G~v~~wG~n~~Gqlg-~p~~~~~~i~~ia~G~~--hs~~l-~-~G~v~~wG~n~~Gqlg-~P~~~~~~v~~i 107 (282)
T 3qhy_B 35 HGLALK-GGKVLGWGANLNGQLT-MPAATQSGVDAIAAGNY--HSLAL-K-DGEVIAWGGNEDGQTT-VPAEARSGVDAI 107 (282)
T ss_dssp EEEEEE-TTEEEEEECCSSSTTS-CCGGGGSCCCEEEECSS--EEEEE-E-TTEEEEEECCTTSTTC-CCGGGSSSEEEE
T ss_pred eEEEEE-CCEEEEEeCCCCCCCC-CCccCCCCEEEEEeCCC--EEEEE-E-CCEEEEeeCCCCCCCC-CCcccCCCeEEE
Confidence 333345 8999999764322111 01001224455555433 34555 4 8999999875432111 011113467777
Q ss_pred EEcCCCCEEEEEeCCCeEEEEECCCC-ceeeEeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCC
Q 008356 88 SFSSDDKIIASVGLDKKLYTYDPGSR-RPSSCITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (568)
Q Consensus 88 afsPdg~~LaSgs~DGtV~IWDlrt~-~~v~~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~ 154 (568)
+.-.+ +.+... ||.|+.|-.... +.-........|..++.-.+ ..++-. ||.|+.|-....
T Consensus 108 a~G~~--hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~--~~~~l~-~G~v~~wG~n~~ 169 (282)
T 3qhy_B 108 AAGAW--ASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVY--TALAVK-NGGVIAWGDNYF 169 (282)
T ss_dssp EEETT--EEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS--EEEEEE-TTEEEEEECCTT
T ss_pred ECcCC--EEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccC--EEEEEE-CCEEEEecCCCC
Confidence 76643 333344 999999976542 22111123345766665433 333334 799999987654
No 365
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=49.12 E-value=2.3e+02 Score=28.93 Aligned_cols=145 Identities=15% Similarity=0.165 Sum_probs=81.4
Q ss_pred CEEEEEECCCcEEEEECCC---------CceeEE---eeCCCCCcEEEEEEcc-CCCeEEEEEeCCCeEEEEECCCCC--
Q 008356 7 EHLASISLSGDLILHNLAS---------GAKAAE---LKDPNEQVLRVLDYSR-NSRHLLVTAGDDGTLHLWDTTGRS-- 71 (568)
Q Consensus 7 ~~LasGs~DG~V~VWDl~t---------g~~v~~---l~~~h~~~Vs~Lafsp-dg~~lLaTgs~DGtV~VWDl~t~~-- 71 (568)
+.|+..+..|.++-+.... |..+.. +. .....+..+.+.. +...+|+.++.+|.++...+..-.
T Consensus 58 d~ll~fT~~G~~~~~~~~eip~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~ 136 (370)
T 3l6v_A 58 DTLLTFTSSGKVFWLPVHQLPEAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFR 136 (370)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSC
T ss_pred CEEEEEeCCCeEEEEEHHHCcCCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcc
Confidence 4566667777776665321 211111 22 1234444444432 122378899999999998873211
Q ss_pred ----ceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------ceeeE--eecCCCeEEEEEec------
Q 008356 72 ----PKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSR-------RPSSC--ITYEAPFSSLAFID------ 132 (568)
Q Consensus 72 ----~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~-------~~v~~--~~h~~~ItsLafsP------ 132 (568)
.....+.. .+.+-.+........|+..+.+|.+..++...- +-+.. +.....|..+...+
T Consensus 137 ~~~G~~ai~L~~-~d~lv~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~ 215 (370)
T 3l6v_A 137 LARGKIAINLDE-GDALVGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVE 215 (370)
T ss_dssp CTTCEESSCCCT-TCCEEEEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC----
T ss_pred cCCceEEEEeCC-CCEEEEEEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccc
Confidence 11112333 344555555555667888888998888865321 11222 23445566555544
Q ss_pred -----------------------------CCCEEEEEEcCCeEEEEECCC
Q 008356 133 -----------------------------DDWILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 133 -----------------------------dg~~LasGs~DG~V~VWDlrt 153 (568)
++..|++.+..|..+...+..
T Consensus 216 ~~~~~~~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e 265 (370)
T 3l6v_A 216 DEVEDESAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAE 265 (370)
T ss_dssp -------------------------------CEEEEEETTSEEEEEEGGG
T ss_pred cccccccccccccccccccccccccccccCCceEEEeeCCCCEEEEEHHH
Confidence 456889999999988888764
No 366
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=43.63 E-value=2.3e+02 Score=27.34 Aligned_cols=128 Identities=8% Similarity=0.051 Sum_probs=68.2
Q ss_pred CCcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCC
Q 008356 15 SGDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDK 94 (568)
Q Consensus 15 DG~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~ 94 (568)
||.|+.|-......+.. .......|..|+...+ +.++. . ||.|+.|-.......- ........|..++.-.+..
T Consensus 80 ~G~v~~wG~n~~Gqlg~-P~~~~~~v~~ia~G~~--hs~al-~-~G~v~~wG~n~~gqlg-~~~~~~~~i~~i~~G~~~~ 153 (282)
T 3qhy_B 80 DGEVIAWGGNEDGQTTV-PAEARSGVDAIAAGAW--ASYAL-K-DGKVIAWGDDSDGQTT-VPAEAQSGVTALDGGVYTA 153 (282)
T ss_dssp TTEEEEEECCTTSTTCC-CGGGSSSEEEEEEETT--EEEEE-E-TTEEEEEECCTTSTTS-CCGGGGSSEEEEEECSSEE
T ss_pred CCEEEEeeCCCCCCCCC-CcccCCCeEEEECcCC--EEEEE-e-CCeEEEecCCCCCcCC-CCccCCCCeEEEEcccCEE
Confidence 89999997543211110 1001234666665543 33433 4 9999999875432111 1111234577766553332
Q ss_pred EEEEEeCCCeEEEEECCCCceeeE-eecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCCC
Q 008356 95 IIASVGLDKKLYTYDPGSRRPSSC-ITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRGK 154 (568)
Q Consensus 95 ~LaSgs~DGtV~IWDlrt~~~v~~-~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt~ 154 (568)
+.-. ||.|+.|-......+.. ......|..++.-.+ ..++. .||.|+.|-....
T Consensus 154 --~~l~-~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~-hs~al--~~G~v~~wG~n~~ 208 (282)
T 3qhy_B 154 --LAVK-NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIF-HSLAL--KDGKVIAWGDNRY 208 (282)
T ss_dssp --EEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSS-EEEEE--ETTEEEEEECCTT
T ss_pred --EEEE-CCEEEEecCCCCCCCCCceecCCCeEEEEecCC-EEEEE--ECCeEEEEECCCC
Confidence 2234 79999997654222211 122345777766543 23333 6999999987654
No 367
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=43.56 E-value=2.5e+02 Score=27.71 Aligned_cols=101 Identities=10% Similarity=0.111 Sum_probs=66.7
Q ss_pred EEEEEeCCCeEEEEECCCCC------ceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC----C---ceeeE
Q 008356 52 LLVTAGDDGTLHLWDTTGRS------PKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS----R---RPSSC 118 (568)
Q Consensus 52 lLaTgs~DGtV~VWDl~t~~------~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt----~---~~v~~ 118 (568)
.++..+.+|.++...+..-. .....+.. .+.+-.+....+...|+..+.+|.+..+.... + +-+..
T Consensus 116 ~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~ 194 (312)
T 1suu_A 116 YLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCG 194 (312)
T ss_dssp EEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEEC
T ss_pred EEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEe
Confidence 67788999999998873221 11112333 45566666555566788899999988887643 1 11222
Q ss_pred e--ecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 008356 119 I--TYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 119 ~--~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt 153 (568)
+ .....+..+..-.++..|++.+..|.++..++..
T Consensus 195 i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e 231 (312)
T 1suu_A 195 MKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSK 231 (312)
T ss_dssp CCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGG
T ss_pred EEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHH
Confidence 2 3455666666655667788999999999988854
No 368
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=36.72 E-value=3.2e+02 Score=26.89 Aligned_cols=101 Identities=15% Similarity=0.074 Sum_probs=64.9
Q ss_pred EEEEEeCCCeEEEEECCCCC-----c-eeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC-------Cceee-
Q 008356 52 LLVTAGDDGTLHLWDTTGRS-----P-KVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS-------RRPSS- 117 (568)
Q Consensus 52 lLaTgs~DGtV~VWDl~t~~-----~-~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt-------~~~v~- 117 (568)
+++.++.+|.++.-.+..-. . ....+..+ +.+-.+....+...|+..+.+|.+..++... .+-+.
T Consensus 111 ~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~ 189 (307)
T 1zi0_A 111 KVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRG 189 (307)
T ss_dssp EEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEEC
T ss_pred EEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEe
Confidence 68888999999999873211 1 11123334 4555555555566788888999888887532 11122
Q ss_pred -EeecCCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 008356 118 -CITYEAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 118 -~~~h~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt 153 (568)
.+.....|..+....++..|++.+..|.++-.++..
T Consensus 190 i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~e 226 (307)
T 1zi0_A 190 IRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAE 226 (307)
T ss_dssp CCCCTTCCEEEEECCCSSCEEEEEETTSEEEEECGGG
T ss_pred EEeCCCCEEEEEEEecCCCEEEEEEcCCceEEEEHHH
Confidence 223455677766555667889999999999887743
No 369
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=34.10 E-value=87 Score=34.49 Aligned_cols=54 Identities=11% Similarity=0.156 Sum_probs=39.4
Q ss_pred ccCCCCEEEEEECC------------CcEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEE
Q 008356 2 YNCKDEHLASISLS------------GDLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVT 55 (568)
Q Consensus 2 fSpdG~~LasGs~D------------G~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaT 55 (568)
|+++|++++.-..+ ..+.+.+..+++..+.+.++....++.++|+|+++.+|+.
T Consensus 483 fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 483 FDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp ECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred ECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 67888866554322 2356667778888777888778899999999999865554
No 370
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=33.42 E-value=1e+02 Score=33.93 Aligned_cols=57 Identities=16% Similarity=0.306 Sum_probs=41.9
Q ss_pred eEEEEEcCCCCEEEEEeCC------------CeEEEEECCCCceeeEe--ecCCCeEEEEEecCCCEEEEE
Q 008356 84 TAGISFSSDDKIIASVGLD------------KKLYTYDPGSRRPSSCI--TYEAPFSSLAFIDDDWILTAG 140 (568)
Q Consensus 84 VtslafsPdg~~LaSgs~D------------GtV~IWDlrt~~~v~~~--~h~~~ItsLafsPdg~~LasG 140 (568)
.-.|+|++.|++++.-..+ ..+.+.+..+++..+.+ .....++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 4678999999976655432 24667777777766555 456789999999999887765
No 371
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=31.75 E-value=4.1e+02 Score=26.65 Aligned_cols=144 Identities=13% Similarity=0.173 Sum_probs=78.9
Q ss_pred CEEEEEECCCcEEEEECCC-Cc----------eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC----
Q 008356 7 EHLASISLSGDLILHNLAS-GA----------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS---- 71 (568)
Q Consensus 7 ~~LasGs~DG~V~VWDl~t-g~----------~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~---- 71 (568)
.+.+.-..||.|+.|-... ++ ....+.......+..+++..-.. ..+.-..||.|+.|-.....
T Consensus 63 ~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~-h~~al~~~G~v~~wG~n~~GqLG~ 141 (389)
T 3kci_A 63 QTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK-HCLALSSEGEVYSWGEAEDGKLGH 141 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCS-EEEEEETTSCEEEEECCGGGTTCS
T ss_pred CeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCC-eEEEEcCCCCEEEEeCCCCCcCCC
Confidence 3455567889999996432 11 11122221233455556655444 45556789999999653211
Q ss_pred ------ceeEEecc-CCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC-c--------ee--eEee--cCCCeEEEEEe
Q 008356 72 ------PKVSWLKQ-HSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSR-R--------PS--SCIT--YEAPFSSLAFI 131 (568)
Q Consensus 72 ------~~v~~l~~-H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~-~--------~v--~~~~--h~~~ItsLafs 131 (568)
.....+.. ....|..|+.- ..+.+....||.|+.|-.... + .. ..+. ....|..++.-
T Consensus 142 g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G 219 (389)
T 3kci_A 142 GNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACG 219 (389)
T ss_dssp SSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEc
Confidence 00111111 12246555544 456666778999999975331 1 00 1111 23456666665
Q ss_pred cCCCEEEEEEcCCeEEEEECCC
Q 008356 132 DDDWILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 132 Pdg~~LasGs~DG~V~VWDlrt 153 (568)
......++-..||.|+.|-...
T Consensus 220 ~g~~~t~~l~~~G~v~~wG~n~ 241 (389)
T 3kci_A 220 SGDAQTLCLTDDDTVWSWGDGD 241 (389)
T ss_dssp CSSCEEEEEETTTEEEEEECCG
T ss_pred CCCcEEEEEccCCEEEEEeCCC
Confidence 4335677778899999997653
No 372
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=31.24 E-value=1.6e+02 Score=32.48 Aligned_cols=60 Identities=13% Similarity=0.273 Sum_probs=44.0
Q ss_pred CCeEEEEEcCCCCEEEEEeC------------CCeEEEEECCCCceeeEee--cCCCeEEEEEecCCCEEEEEE
Q 008356 82 APTAGISFSSDDKIIASVGL------------DKKLYTYDPGSRRPSSCIT--YEAPFSSLAFIDDDWILTAGT 141 (568)
Q Consensus 82 ~~VtslafsPdg~~LaSgs~------------DGtV~IWDlrt~~~v~~~~--h~~~ItsLafsPdg~~LasGs 141 (568)
.....|.|.++|.+.+.... ...|..+|..+++....+. ....++.++|+||++.|++.-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 34678999999988774332 1267888887887665553 346789999999999888764
No 373
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=30.99 E-value=38 Score=40.19 Aligned_cols=37 Identities=22% Similarity=0.264 Sum_probs=31.2
Q ss_pred CeEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEe
Q 008356 83 PTAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCI 119 (568)
Q Consensus 83 ~VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~ 119 (568)
.+.+++..++..++++.+.|+++|+||+.+++++...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3455666678899999999999999999999988765
No 374
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=30.63 E-value=4.1e+02 Score=26.37 Aligned_cols=146 Identities=10% Similarity=0.110 Sum_probs=82.8
Q ss_pred CCEEEEEECCCcEEEEECCC---------CceeEE-eeCCCCC-cEEEEEEcc--CCCeEEEEEeCCCeEEEEECCCCC-
Q 008356 6 DEHLASISLSGDLILHNLAS---------GAKAAE-LKDPNEQ-VLRVLDYSR--NSRHLLVTAGDDGTLHLWDTTGRS- 71 (568)
Q Consensus 6 G~~LasGs~DG~V~VWDl~t---------g~~v~~-l~~~h~~-~Vs~Lafsp--dg~~lLaTgs~DGtV~VWDl~t~~- 71 (568)
.+.|+..+..|.++-+.... |..+.. +.-..++ .+..+.... ++. +++.++.+|.++...+..-.
T Consensus 50 ~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~-~ll~~T~~G~iKrt~l~e~~~ 128 (323)
T 1wp5_A 50 KDVLLLFTNKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNG-YFLFVTRNGMVKKTELKHYKA 128 (323)
T ss_dssp TSEEEEEETTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSC-EEEEEETTSEEEEEEGGGGCC
T ss_pred CCEEEEEECCCEEEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCc-eEEEEeCCCeEEEeEHHHhhh
Confidence 34566666777766655421 221111 1111233 344444432 133 68888999999999873211
Q ss_pred ----ceeE--EeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC-------CceeeEe--ecCCCeEEEEEecCCC-
Q 008356 72 ----PKVS--WLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS-------RRPSSCI--TYEAPFSSLAFIDDDW- 135 (568)
Q Consensus 72 ----~~v~--~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt-------~~~v~~~--~h~~~ItsLafsPdg~- 135 (568)
.-+. .+... +.+-.+........|+..+.+|.+..++... .+-+..+ .....|..+...+++.
T Consensus 129 ~~r~~G~~ai~l~e~-d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~ 207 (323)
T 1wp5_A 129 QRYSKPLTGINLKND-DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDE 207 (323)
T ss_dssp SCCSSCEECSCCCTT-CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTC
T ss_pred ccccCceEEEEeCCC-CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCc
Confidence 1111 22222 5555555555566788889999988887632 1122222 3455666665555455
Q ss_pred EEEEEEcCCeEEEEECCC
Q 008356 136 ILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 136 ~LasGs~DG~V~VWDlrt 153 (568)
.|++.+..|..+..++..
T Consensus 208 ~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 208 SIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEEEEETTSEEEEEEGGG
T ss_pred EEEEEECCCceEEEEHHH
Confidence 788889999988887754
No 375
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=28.62 E-value=4.6e+02 Score=26.25 Aligned_cols=144 Identities=13% Similarity=0.120 Sum_probs=78.1
Q ss_pred CCCEEEEEECCCcEEEEECCC-Cc----------eeEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCCCC--
Q 008356 5 KDEHLASISLSGDLILHNLAS-GA----------KAAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTGRS-- 71 (568)
Q Consensus 5 dG~~LasGs~DG~V~VWDl~t-g~----------~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t~~-- 71 (568)
-..+.+.-..||.|+.|-... ++ ....+.......|..|+... . ..+.-..||.|+.|-.....
T Consensus 115 G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~--~-hs~alt~~G~v~~wG~n~~GqL 191 (389)
T 3kci_A 115 GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGG--A-HSACVTAAGDLYTWGKGRYGRL 191 (389)
T ss_dssp TCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECS--S-EEEEEETTSCEEEEECCGGGTT
T ss_pred CCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCc--C-eEEEEeCCCeEEEeCCCCCCCc
Confidence 345566667899999996432 11 11122211222455454432 2 35556789999999753210
Q ss_pred ------c--eeEEec-cCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCCC-c---------ee-eEee--cCCCeEEEE
Q 008356 72 ------P--KVSWLK-QHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGSR-R---------PS-SCIT--YEAPFSSLA 129 (568)
Q Consensus 72 ------~--~v~~l~-~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt~-~---------~v-~~~~--h~~~ItsLa 129 (568)
. ....+. .....|..++.-....+.+....||.|+.|-.... + .. ..+. ....|..++
T Consensus 192 G~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~ 271 (389)
T 3kci_A 192 GHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE 271 (389)
T ss_dssp CSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEE
T ss_pred CCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEe
Confidence 0 011111 12345666666543466777788999999965421 1 01 1111 122466665
Q ss_pred EecCCCEEEEEEcCCeEEEEECCC
Q 008356 130 FIDDDWILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 130 fsPdg~~LasGs~DG~V~VWDlrt 153 (568)
.- ....++-..||.|+.|-...
T Consensus 272 ~G--~~hs~alt~~G~v~~wG~n~ 293 (389)
T 3kci_A 272 CG--SQFSVALTKSGAVYTWGKGD 293 (389)
T ss_dssp EE--TTEEEEEETTSCEEEEECCG
T ss_pred CC--CCEEEEEeCCCeEEEEeCCC
Confidence 54 34556667899999997653
No 376
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=28.12 E-value=73 Score=36.02 Aligned_cols=36 Identities=11% Similarity=0.039 Sum_probs=29.6
Q ss_pred eEEEEEcCCCCEEEEEeCCCeEEEEECCCCceeeEeec
Q 008356 84 TAGISFSSDDKIIASVGLDKKLYTYDPGSRRPSSCITY 121 (568)
Q Consensus 84 VtslafsPdg~~LaSgs~DGtV~IWDlrt~~~v~~~~h 121 (568)
|.++.+ +..++++.+.|+++|+||+++++++.....
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 555444 478999999999999999999998877654
No 377
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=28.04 E-value=4.1e+02 Score=25.45 Aligned_cols=143 Identities=13% Similarity=0.053 Sum_probs=82.5
Q ss_pred CEEEEEECCCcEEEEECCCCce-eEEeeCCCCCcEEEEEEccCCCeEEEEEeCCCeEEEEECCC---CCce------eEE
Q 008356 7 EHLASISLSGDLILHNLASGAK-AAELKDPNEQVLRVLDYSRNSRHLLVTAGDDGTLHLWDTTG---RSPK------VSW 76 (568)
Q Consensus 7 ~~LasGs~DG~V~VWDl~tg~~-v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~DGtV~VWDl~t---~~~~------v~~ 76 (568)
..+++.+.+|.|+--....-.. ...++. .+..+. +......+ .|+..+..|.++-+.... .... ...
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~~~~~lke-~D~l~~-~~~~~t~~-~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~ 79 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDAPGLNYKA-GDSFKA-AVKGKSNQ-PVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLT 79 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCSTTSCCCT-TCCEEE-EEEEETTS-CEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCC
T ss_pred CEEEEEeCCCEEEEeeCCcCCceeccCCC-CCEEEE-EEEeCCCC-EEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeec
Confidence 4567788999988766533111 112221 233444 33333344 356667889876665421 1111 011
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEECCC-------CceeeEeecCCCeEEEEEe-cCCCEEEEEEcCCeEEE
Q 008356 77 LKQHSAPTAGISFSSDDKIIASVGLDKKLYTYDPGS-------RRPSSCITYEAPFSSLAFI-DDDWILTAGTSNGRVVF 148 (568)
Q Consensus 77 l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWDlrt-------~~~v~~~~h~~~ItsLafs-Pdg~~LasGs~DG~V~V 148 (568)
+. ....|.++....++.+|+.++..|.++...+.. +.....+...+.+..+... .++..|+..+.+|.+..
T Consensus 80 L~-~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T~~G~~lr 158 (256)
T 1zvt_A 80 LP-PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLM 158 (256)
T ss_dssp CC-TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEETTSEEEE
T ss_pred CC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEcCCCeEEE
Confidence 22 245576664434667788999999999987632 2222233344555555555 34568889999999999
Q ss_pred EECCC
Q 008356 149 YDIRG 153 (568)
Q Consensus 149 WDlrt 153 (568)
++...
T Consensus 159 f~~~e 163 (256)
T 1zvt_A 159 FPVSD 163 (256)
T ss_dssp EEGGG
T ss_pred EEHHH
Confidence 98764
No 378
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=27.12 E-value=2.7e+02 Score=23.06 Aligned_cols=18 Identities=11% Similarity=0.041 Sum_probs=11.2
Q ss_pred CCEEEEEECCCcEEEEEC
Q 008356 6 DEHLASISLSGDLILHNL 23 (568)
Q Consensus 6 G~~LasGs~DG~V~VWDl 23 (568)
+.+.+.-..||.+.+|+.
T Consensus 24 g~~~L~~q~dGNLvL~~~ 41 (113)
T 3mez_B 24 RDYSLVMRDDCNLVLTKG 41 (113)
T ss_dssp TTEEEEECTTSCEEEEET
T ss_pred CCEEEEEcCCCEEEEEEC
Confidence 444455566777777764
No 379
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=25.99 E-value=4.4e+02 Score=25.19 Aligned_cols=101 Identities=12% Similarity=0.064 Sum_probs=59.1
Q ss_pred EEEEEeCCCeEEEEECCCCCceeEEeccCCCCeEEEEEcCCCCEEEEEeCCCeEEEEE---CCC----Cceee---Eeec
Q 008356 52 LLVTAGDDGTLHLWDTTGRSPKVSWLKQHSAPTAGISFSSDDKIIASVGLDKKLYTYD---PGS----RRPSS---CITY 121 (568)
Q Consensus 52 lLaTgs~DGtV~VWDl~t~~~~v~~l~~H~~~VtslafsPdg~~LaSgs~DGtV~IWD---lrt----~~~v~---~~~h 121 (568)
++++.+.+|.|+--...........++.... +..+........|+..+..|.++-+. +.. |.++. .+..
T Consensus 4 v~v~lT~~G~iKr~~~~~~~~~~~~lke~D~-l~~~~~~~t~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~~ 82 (256)
T 1zvt_A 4 VTIVLSQMGWVRSAKGHDIDAPGLNYKAGDS-FKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPP 82 (256)
T ss_dssp EEEEEETTSEEEEEESSCCCSTTSCCCTTCC-EEEEEEEETTSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCCT
T ss_pred EEEEEeCCCEEEEeeCCcCCceeccCCCCCE-EEEEEEeCCCCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCCC
Confidence 5667788888877665432211112333333 44444444455677778888766554 422 22221 1234
Q ss_pred CCCeEEEEEecCCCEEEEEEcCCeEEEEECCC
Q 008356 122 EAPFSSLAFIDDDWILTAGTSNGRVVFYDIRG 153 (568)
Q Consensus 122 ~~~ItsLafsPdg~~LasGs~DG~V~VWDlrt 153 (568)
...|..+....++.+|+.++.+|.++...+..
T Consensus 83 ~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e 114 (256)
T 1zvt_A 83 GATVDHMLMESDDQKLLMASDAGYGFVCTFND 114 (256)
T ss_dssp TCCEEEEECCCTTCEEEEEBTTSEEEEEEGGG
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHH
Confidence 55677664434567788999999999998754
No 380
>3g1g_A GAG polyprotein, capsid protein; alpha-helical bundle, virion, viral protein, retrovirus; 2.01A {Rous sarcoma virus}
Probab=21.95 E-value=9.1 Score=31.39 Aligned_cols=50 Identities=24% Similarity=0.375 Sum_probs=30.2
Q ss_pred CCCCcchhcccccccCC-ccc------------------------cCCCcccccchhhHHHHHhhhccccccccccCCC
Q 008356 495 REPRRTYAERISTTSGT-SLS------------------------VGSPKTKKTGAETKEELLSNFLSRSDTSAVVEPG 548 (568)
Q Consensus 495 ~~~~~~~~~~~~~~~~~-~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (568)
+|||.+|.+|+-++.-. -+. .|-||. +-+-|||+..+|.|+.++.-+.-|
T Consensus 11 kEPF~dfVdRl~kal~~eq~~~~vK~~m~~tLlvQNANpdCk~Il~~~~~~----~~~~~e~Ik~~l~~~~~~~~~~~~ 85 (87)
T 3g1g_A 11 SESFVDFANRLIKAVEGSDLPPSARAPVIIDCFRQKSQPDIQQLIRTAPST----LTTPGEIIKYVLDRQKTAPLTDQG 85 (87)
T ss_dssp TCCHHHHHHHHHHHHHHSSSCGGGHHHHHHHHHHHHSCHHHHHHHHTSCTT----CCSHHHHHHHHHHHHC--------
T ss_pred CCcHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHhcCHHHHHHHHhCCCC----CCChHHHHHHHHHHhhcCCccccc
Confidence 58999999999887611 111 234443 455699999999999986655444
No 381
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=21.11 E-value=2.5e+02 Score=30.90 Aligned_cols=42 Identities=14% Similarity=0.224 Sum_probs=30.7
Q ss_pred cEEEEECCCCceeEEeeCCCCCcEEEEEEccCCCeEEEEEeC
Q 008356 17 DLILHNLASGAKAAELKDPNEQVLRVLDYSRNSRHLLVTAGD 58 (568)
Q Consensus 17 ~V~VWDl~tg~~v~~l~~~h~~~Vs~Lafspdg~~lLaTgs~ 58 (568)
.|..++..+++....+.......++.++|+||++.+++....
T Consensus 510 ~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQH 551 (592)
T 4a9v_A 510 QMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp EEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred eEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeC
Confidence 567777777877666665556678999999999866665543
Done!