BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 008365
(568 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 175 bits (443), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 165/303 (54%), Gaps = 30/303 (9%)
Query: 208 ALANNDVRYRKYTIEEIEEATDKFSE------AMKIGEGGYGPVYRGKLDHTPVAIKVLR 261
+L +D R+ ++ E++ T+ F E K+GEGG+G VY+G +++T VA+K L
Sbjct: 4 SLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLA 63
Query: 262 P----DAAQGKRQFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLR 315
+ K+QF QE++V++ +H N+V LLG D CLVY YM NGSL DRL
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 316 RGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLA 375
TP + W R KIA A + FLH+ +HRD+K ANILLD + +KISD GLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 376 RLVPPSVADSVTQYHMTS-AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITA---- 430
R ++ Q M S GT Y+ PE + G +T KSDIYSFG++LL+IIT
Sbjct: 181 R-----ASEKFAQTVMXSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAV 234
Query: 431 ---RSP-MGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
R P + L E+ T+ + +D + D + + E+ +A QC +K RPD+
Sbjct: 235 DEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDI 294
Query: 487 GTV 489
V
Sbjct: 295 KKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 164/302 (54%), Gaps = 28/302 (9%)
Query: 208 ALANNDVRYRKYTIEEIEEATDKFSE------AMKIGEGGYGPVYRGKLDHTPVAIKVLR 261
+L +D R+ ++ E++ T+ F E K+GEGG+G VY+G +++T VA+K L
Sbjct: 4 SLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLA 63
Query: 262 P----DAAQGKRQFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLR 315
+ K+QF QE++V++ +H N+V LLG D CLVY YM NGSL DRL
Sbjct: 64 AMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSC 123
Query: 316 RGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLA 375
TP + W R KIA A + FLH+ +HRD+K ANILLD + +KISD GLA
Sbjct: 124 LDGTPPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLA 180
Query: 376 RLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITA----- 430
R A +V + GT Y+ PE + G +T KSDIYSFG++LL+IIT
Sbjct: 181 R-ASEKFAQTVMXXRIV---GTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVD 235
Query: 431 --RSP-MGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLG 487
R P + L E+ T+ + +D + D + + E+ +A QC +K RPD+
Sbjct: 236 EHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIK 295
Query: 488 TV 489
V
Sbjct: 296 KV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 113/299 (37%), Positives = 162/299 (54%), Gaps = 30/299 (10%)
Query: 212 NDVRYRKYTIEEIEEATDKFSE------AMKIGEGGYGPVYRGKLDHTPVAIKVLRP--- 262
+D R+ ++ E++ T+ F E K+GEGG+G VY+G +++T VA+K L
Sbjct: 2 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVD 61
Query: 263 -DAAQGKRQFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNT 319
+ K+QF QE++V++ +H N+V LLG D CLVY YM NGSL DRL T
Sbjct: 62 ITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT 121
Query: 320 PVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVP 379
P + W R KIA A + FLH+ +HRD+K ANILLD + +KISD GLAR
Sbjct: 122 PPLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR--- 175
Query: 380 PSVADSVTQYHMTS-AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITA-------R 431
++ Q M GT Y+ PE + G +T KSDIYSFG++LL+IIT R
Sbjct: 176 --ASEKFAQXVMXXRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHR 232
Query: 432 SP-MGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTV 489
P + L E+ T+ + +D + D + + E+ +A QC +K RPD+ V
Sbjct: 233 EPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 291
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 160/284 (56%), Gaps = 25/284 (8%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKL-DHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI 281
++EEAT+ F IG G +G VY+G L D VA+K P+++QG +F+ E+E LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIP--WRKRFKIAAEIATA 337
RHP++V L+G C + L+Y+YM NG+L+ R L + P + W +R +I A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLK-RHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA-G 396
L +LH ++HRD+K NILLD N+V KI+D G+++ + Q H+ G
Sbjct: 152 LHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISK-----KGTELDQTHLXXVVKG 203
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS------PMGLTHHVSRAIE---KG 447
T YIDPEY G LT KSD+YSFG++L +++ ARS P + + A+E G
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 448 TLAEMLDPAVTD-WPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
L +++DP + D E+ F A++C L +DRP +G V+
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/284 (37%), Positives = 160/284 (56%), Gaps = 25/284 (8%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKL-DHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI 281
++EEAT+ F IG G +G VY+G L D VA+K P+++QG +F+ E+E LS
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIP--WRKRFKIAAEIATA 337
RHP++V L+G C + L+Y+YM NG+L+ R L + P + W +R +I A
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLK-RHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA-G 396
L +LH ++HRD+K NILLD N+V KI+D G+++ + Q H+ G
Sbjct: 152 LHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISK-----KGTELGQTHLXXVVKG 203
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS------PMGLTHHVSRAIE---KG 447
T YIDPEY G LT KSD+YSFG++L +++ ARS P + + A+E G
Sbjct: 204 TLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG 263
Query: 448 TLAEMLDPAVTD-WPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
L +++DP + D E+ F A++C L +DRP +G V+
Sbjct: 264 QLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVL 307
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 111/295 (37%), Positives = 154/295 (52%), Gaps = 28/295 (9%)
Query: 215 RYRKYTIEEIEEATDKFSE------AMKIGEGGYGPVYRGKLDHTPVAIKVLRP----DA 264
R+ ++ E++ T+ F E K GEGG+G VY+G +++T VA+K L
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 61
Query: 265 AQGKRQFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVI 322
+ K+QF QE++V + +H N+V LLG D CLVY Y NGSL DRL TP +
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
W R KIA A + FLH+ +HRD+K ANILLD + +KISD GLAR
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR-ASEKF 177
Query: 383 ADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITA-------RSP-M 434
A V + GT Y PE + G +T KSDIYSFG++LL+IIT R P +
Sbjct: 178 AQXVX---XSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL 233
Query: 435 GLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTV 489
L E+ T+ + +D D + + E+ +A QC +K RPD+ V
Sbjct: 234 LLDIKEEIEDEEKTIEDYIDKKXNDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 155/291 (53%), Gaps = 22/291 (7%)
Query: 217 RKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKL-DHTPVAIKVLRPDAAQG-KRQFQQE 274
+++++ E++ A+D FS +G GG+G VY+G+L D T VA+K L+ + QG + QFQ E
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 275 VEVLSSIRHPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNT-PVIPWRKRFKIA 331
VE++S H N++ L G C P LVY YM NGS+ L R + P + W KR +IA
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 332 AEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHM 391
A L +LH ++HRD+K ANILLD + + + D GLA+L+ D +
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-----DYKDXHVX 200
Query: 392 TSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSR------AIE 445
+ GT +I PEY TG + K+D++ +G+MLL++IT + L +
Sbjct: 201 XAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 260
Query: 446 KGTLAEMLDPAVTD------WPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
KG L E A+ D + E E ++A+ C + +RP + V+
Sbjct: 261 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 311
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/291 (33%), Positives = 152/291 (52%), Gaps = 22/291 (7%)
Query: 217 RKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKL-DHTPVAIKVLRPDAAQG-KRQFQQE 274
+++++ E++ A+D F +G GG+G VY+G+L D VA+K L+ + QG + QFQ E
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 275 VEVLSSIRHPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNT-PVIPWRKRFKIA 331
VE++S H N++ L G C P LVY YM NGS+ L R + P + W KR +IA
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 332 AEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHM 391
A L +LH ++HRD+K ANILLD + + + D GLA+L+ D +
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-----DYKDXHVX 192
Query: 392 TSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSR------AIE 445
+ G +I PEY TG + K+D++ +G+MLL++IT + L +
Sbjct: 193 XAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWV 252
Query: 446 KGTLAEMLDPAVTD------WPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
KG L E A+ D + E E ++A+ C + +RP + V+
Sbjct: 253 KGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVV 303
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 115/204 (56%), Gaps = 11/204 (5%)
Query: 236 KIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKR--QFQQEVEVLSSIRHPNMVLLLGAC 293
KIG G +G V+R + + VA+K+L +R +F +EV ++ +RHPN+VL +GA
Sbjct: 44 KIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 294 --PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
P +V EY+ GSL L + G + R+R +A ++A + +LH P P+VH
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVH 162
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGML 411
R+LK N+L+D+ Y K+ D GL+RL + T SAAGT ++ PE +
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRL------KASTFLSSKSAAGTPEWMAPEVLRDEPS 216
Query: 412 TTKSDIYSFGIMLLQIITARSPMG 435
KSD+YSFG++L ++ T + P G
Sbjct: 217 NEKSDVYSFGVILWELATLQQPWG 240
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 74/204 (36%), Positives = 113/204 (55%), Gaps = 11/204 (5%)
Query: 236 KIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKR--QFQQEVEVLSSIRHPNMVLLLGAC 293
KIG G +G V+R + + VA+K+L +R +F +EV ++ +RHPN+VL +GA
Sbjct: 44 KIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 294 --PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
P +V EY+ GSL L + G + R+R +A ++A + +LH P P+VH
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNP-PIVH 162
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGML 411
RDLK N+L+D+ Y K+ D GL+RL S AAGT ++ PE +
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXS------KXAAGTPEWMAPEVLRDEPS 216
Query: 412 TTKSDIYSFGIMLLQIITARSPMG 435
KSD+YSFG++L ++ T + P G
Sbjct: 217 NEKSDVYSFGVILWELATLQQPWG 240
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 140/303 (46%), Gaps = 65/303 (21%)
Query: 213 DVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLR----PDAAQGK 268
++ + + T+EEI IG GG+G VYR VA+K R D +Q
Sbjct: 3 EIDFAELTLEEI------------IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTI 50
Query: 269 RQFQQEVEVLSSIRHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTP---VI 322
+QE ++ + ++HPN++ L G C P+ CLV E+ G L +R+L P ++
Sbjct: 51 ENVRQEAKLFAMLKHPNIIALRGVCLKEPNL-CLVMEFARGGPL-NRVLSGKRIPPDILV 108
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDR--------NYVSKISDVGL 374
W A +IA + +LH P++HRDLK +NIL+ + N + KI+D GL
Sbjct: 109 NW------AVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162
Query: 375 ARLVPPSVADSVTQYHMT---SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITAR 431
AR ++H T SAAG + ++ PE + M + SD++S+G++L +++T
Sbjct: 163 AR-----------EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGE 211
Query: 432 SPM----GLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLG 487
P GL A+ K L P+ E F+KL C RP
Sbjct: 212 VPFRGIDGLAVAYGVAMNKLALPI---------PSTCPEPFAKLMEDCWNPDPHSRPSFT 262
Query: 488 TVI 490
++
Sbjct: 263 NIL 265
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 115/240 (47%), Gaps = 28/240 (11%)
Query: 214 VRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQ 273
+ Y++ +EE+ +G G +G V + K VAIK + ++ ++ F
Sbjct: 6 IDYKEIEVEEV------------VGRGAFGVVCKAKWRAKDVAIKQIESESE--RKAFIV 51
Query: 274 EVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
E+ LS + HPN+V L GAC + CLV EY GSL + L P +
Sbjct: 52 ELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ 111
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILL-DRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+ + +LH +P+ L+HRDLKP N+LL V KI D G A + Q HMT
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---------QTHMT 162
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM----GLTHHVSRAIEKGT 448
+ G+ ++ PE + + K D++S+GI+L ++IT R P G + A+ GT
Sbjct: 163 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT 222
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 115/240 (47%), Gaps = 28/240 (11%)
Query: 214 VRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQ 273
+ Y++ +EE+ +G G +G V + K VAIK + ++ ++ F
Sbjct: 5 IDYKEIEVEEV------------VGRGAFGVVCKAKWRAKDVAIKQIESESE--RKAFIV 50
Query: 274 EVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
E+ LS + HPN+V L GAC + CLV EY GSL + L P +
Sbjct: 51 ELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ 110
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILL-DRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+ + +LH +P+ L+HRDLKP N+LL V KI D G A + Q HMT
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---------QTHMT 161
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM----GLTHHVSRAIEKGT 448
+ G+ ++ PE + + K D++S+GI+L ++IT R P G + A+ GT
Sbjct: 162 NNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT 221
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 126/260 (48%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 294 ---PDYGCLVYEYMHNGSLEDRLLRRGNT-PVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM GSL D L +G T + + +AA+IA+ + ++ +
Sbjct: 249 SEEPIY--IVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERMN---Y 301
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL+ ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-----RQGAKFPIKWTAPEAALYG 356
Query: 410 MLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T R P G+ + V +E+G P E E
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 408
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 409 SLHDLMCQCWRKEPEERPTF 428
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 126/260 (48%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 294 ---PDYGCLVYEYMHNGSLEDRLLRRGNT-PVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM GSL D L +G T + + +AA+IA+ + ++ +
Sbjct: 249 SEEPIY--IVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERMN---Y 301
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL+ ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-----RQGAKFPIKWTAPEAALYG 356
Query: 410 MLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T R P G+ + V +E+G P E E
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 408
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 409 SLHDLMCQCWRKEPEERPTF 428
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/260 (32%), Positives = 126/260 (48%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 190 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 248
Query: 294 ---PDYGCLVYEYMHNGSLEDRLLRRGNT-PVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM GSL D L +G T + + +AA+IA+ + ++ +
Sbjct: 249 SEEPIY--IVGEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERMN---Y 301
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL+ ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 302 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-----RQGAKFPIKWTAPEAALYG 356
Query: 410 MLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T R P G+ + V +E+G P E E
Sbjct: 357 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 408
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 409 SLHDLMCQCWRKEPEERPTF 428
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 125/260 (48%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 273 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 331
Query: 294 ---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLV 350
P Y +V EYM GSL D L+ + + +AA+IA+ + ++ + V
Sbjct: 332 SEEPIY--IVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YV 385
Query: 351 HRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG-TFCYIDPEYQQTG 409
HRDL+ ANIL+ N V K++D GLARL+ + +Y A + PE G
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDN------EYTARQGAKFPIKWTAPEAALYG 439
Query: 410 MLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T R P G+ + V +E+G P E E
Sbjct: 440 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 491
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 492 SLHDLMCQCWRKEPEERPTF 511
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 124/260 (47%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 21 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 294 ---PDYGCLVYEYMHNGSLEDRLLRRGNT-PVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM+ GSL D L +G T + + ++A+IA+ + ++ +
Sbjct: 80 SEEPIY--IVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVERMN---Y 132
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL+ ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEWTA-----RQGAKFPIKWTAPEAALYG 187
Query: 410 MLTTKSDIYSFGIMLLQIIT---ARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T P + V +E+G P E E
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 239
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 240 SLHDLMCQCWRKEPEERPTF 259
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 122/260 (46%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ IRH +V L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKIRHEKLVQLYAVV 82
Query: 294 ---PDYGCLVYEYMHNGSLEDRLL-RRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM GSL D L G +P + +AA+IA+ + ++ +
Sbjct: 83 SEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---Y 135
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL+ ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-----RQGAKFPIKWTAPEAALYG 190
Query: 410 MLTTKSDIYSFGIMLLQIIT---ARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T P + V +E+G P E E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 242
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 243 SLHDLMCQCWRKDPEERPTF 262
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 123/260 (47%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 17 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 75
Query: 294 ---PDYGCLVYEYMHNGSLEDRLLRRGNT-PVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM GSL D L +G T + + +AA+IA+ + ++ +
Sbjct: 76 SEEPIY--IVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERMN---Y 128
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL+ ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 129 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-----RQGAKFPIKWTAPEAALYG 183
Query: 410 MLTTKSDIYSFGIMLLQIIT---ARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T P + V +E+G P E E
Sbjct: 184 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 235
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 236 SLHDLMCQCWRKEPEERPTF 255
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 124/260 (47%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 21 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 79
Query: 294 ---PDYGCLVYEYMHNGSLEDRLLRRGNT-PVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM+ GSL D L +G T + + ++A+IA+ + ++ +
Sbjct: 80 SEEPIY--IVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVERMN---Y 132
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL+ ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 133 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-----RQGAKFPIKWTAPEAALYG 187
Query: 410 MLTTKSDIYSFGIMLLQIIT---ARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T P + V +E+G P E E
Sbjct: 188 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 239
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 240 SLHDLMCQCWRKEPEERPTF 259
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 122/260 (46%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 294 ---PDYGCLVYEYMHNGSLEDRLL-RRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM GSL D L G +P + +AA+IA+ + ++ +
Sbjct: 83 SEEPIY--IVIEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---Y 135
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL+ ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEXTA-----RQGAKFPIKWTAPEAALYG 190
Query: 410 MLTTKSDIYSFGIMLLQIIT---ARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T P + V +E+G P E E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 242
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 243 SLHDLMCQCWRKDPEERPTF 262
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 122/260 (46%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 15 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 73
Query: 294 ---PDYGCLVYEYMHNGSLEDRLL-RRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM GSL D L G +P + +AA+IA+ + ++ +
Sbjct: 74 SEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---Y 126
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL+ ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 127 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-----RQGAKFPIKWTAPEAALYG 181
Query: 410 MLTTKSDIYSFGIMLLQIIT---ARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T P + V +E+G P E E
Sbjct: 182 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 233
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 234 SLHDLMCQCWRKDPEERPTF 253
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 122/258 (47%), Gaps = 25/258 (9%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 14 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 72
Query: 294 PDYGC-LVYEYMHNGSLEDRLLRRGNT-PVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ +V EYM GSL D L +G T + + +AA+IA+ + ++ + VH
Sbjct: 73 SEEPIXIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVH 127
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGML 411
RDL+ ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 128 RDLRAANILVGENLVCKVADFGLARLIEDNEXTA-----RQGAKFPIKWTAPEAALYGRF 182
Query: 412 TTKSDIYSFGIMLLQIIT---ARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAESF 468
T KSD++SFGI+L ++ T P + V +E+G P E ES
Sbjct: 183 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPESL 234
Query: 469 SKLAIQCAELRKKDRPDL 486
L QC ++RP
Sbjct: 235 HDLMCQCWRKEPEERPTF 252
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 122/260 (46%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 294 ---PDYGCLVYEYMHNGSLEDRLL-RRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM GSL D L G +P + +AA+IA+ + ++ +
Sbjct: 83 SEEPIY--IVIEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---Y 135
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL+ ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-----RQGAKFPIKWTAPEAALYG 190
Query: 410 MLTTKSDIYSFGIMLLQIIT---ARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T P + V +E+G P E E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 242
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 243 SLHDLMCQCWRKDPEERPTF 262
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 122/260 (46%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 13 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 71
Query: 294 ---PDYGCLVYEYMHNGSLEDRLL-RRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM GSL D L G +P + +AA+IA+ + ++ +
Sbjct: 72 SEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---Y 124
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL+ ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 125 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-----RQGAKFPIKWTAPEAALYG 179
Query: 410 MLTTKSDIYSFGIMLLQIIT---ARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T P + V +E+G P E E
Sbjct: 180 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 231
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 232 SLHDLMCQCWRKDPEERPTF 251
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 122/260 (46%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 294 ---PDYGCLVYEYMHNGSLEDRLL-RRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM GSL D L G +P + +AA+IA+ + ++ +
Sbjct: 83 SEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---Y 135
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL+ ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-----RQGAKFPIKWTAPEAALYG 190
Query: 410 MLTTKSDIYSFGIMLLQIIT---ARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T P + V +E+G P E E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 242
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 243 SLHDLMCQCWRKDPEERPTF 262
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 122/260 (46%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 294 ---PDYGCLVYEYMHNGSLEDRLL-RRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM GSL D L G +P + +AA+IA+ + ++ +
Sbjct: 83 SEEPIY--IVCEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---Y 135
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL+ ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-----RQGAKFPIKWTAPEAALYG 190
Query: 410 MLTTKSDIYSFGIMLLQIIT---ARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T P + V +E+G P E E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 242
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 243 SLHDLMCQCWRKDPEERPTF 262
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 127/259 (49%), Gaps = 29/259 (11%)
Query: 236 KIGEGGYGPVYRGKLD-HTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC- 293
K+G G +G V+ + HT VA+K ++P + F E V+ +++H +V L
Sbjct: 195 KLGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 253
Query: 294 --PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
P Y ++ E+M GSL D L+ P K +A+IA + F+ Q +H
Sbjct: 254 KEPIY--IITEFMAKGSLLD-FLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIH 307
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG-TFCYIDPEYQQTGM 410
RDL+ ANIL+ + V KI+D GLAR++ + +Y A + PE G
Sbjct: 308 RDLRAANILVSASLVCKIADFGLARVIEDN------EYTAREGAKFPIKWTAPEAINFGS 361
Query: 411 LTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLAEMLDPAVTDWPAEAAES 467
T KSD++SFGI+L++I+T R P G+++ V RA+E+G P E
Sbjct: 362 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR--------PENCPEE 413
Query: 468 FSKLAIQCAELRKKDRPDL 486
+ ++C + R ++RP
Sbjct: 414 LYNIMMRCWKNRPEERPTF 432
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 121/260 (46%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 294 ---PDYGCLVYEYMHNGSLEDRLL-RRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM GSL D L G +P + +AA+IA+ + ++ +
Sbjct: 83 SEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---Y 135
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 136 VHRDLAAANILVGENLVCKVADFGLARLIEDNEYTA-----RQGAKFPIKWTAPEAALYG 190
Query: 410 MLTTKSDIYSFGIMLLQIIT---ARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T P + V +E+G P E E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 242
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 243 SLHDLMCQCWRKDPEERPTF 262
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 124/260 (47%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 191 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GNMSPEAFLQEAQVMKKLRHEKLVQLYAVV 249
Query: 294 ---PDYGCLVYEYMHNGSLEDRLL-RRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM GSL D L G +P + +AA+IA+ + ++ +
Sbjct: 250 SEEPIY--IVTEYMSKGSLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---Y 302
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL+ ANIL+ N V K++D GL RL+ + + A + PE G
Sbjct: 303 VHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTA-----RQGAKFPIKWTAPEAALYG 357
Query: 410 MLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T R P G+ + V +E+G P E E
Sbjct: 358 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 409
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 410 SLHDLMCQCWRKDPEERPTF 429
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 127/259 (49%), Gaps = 29/259 (11%)
Query: 236 KIGEGGYGPVYRGKLD-HTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC- 293
K+G G +G V+ + HT VA+K ++P + F E V+ +++H +V L
Sbjct: 22 KLGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 80
Query: 294 --PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
P Y ++ E+M GSL D L+ P K +A+IA + F+ Q +H
Sbjct: 81 KEPIY--IITEFMAKGSLLD-FLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIH 134
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG-TFCYIDPEYQQTGM 410
RDL+ ANIL+ + V KI+D GLAR++ + +Y A + PE G
Sbjct: 135 RDLRAANILVSASLVCKIADFGLARVIEDN------EYTAREGAKFPIKWTAPEAINFGS 188
Query: 411 LTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLAEMLDPAVTDWPAEAAES 467
T KSD++SFGI+L++I+T R P G+++ V RA+E+G P E
Sbjct: 189 FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR--------PENCPEE 240
Query: 468 FSKLAIQCAELRKKDRPDL 486
+ ++C + R ++RP
Sbjct: 241 LYNIMMRCWKNRPEERPTF 259
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/260 (31%), Positives = 121/260 (46%), Gaps = 29/260 (11%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 294 ---PDYGCLVYEYMHNGSLEDRLL-RRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM G L D L G +P + +AA+IA+ + ++ +
Sbjct: 83 SEEPIY--IVMEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---Y 135
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDL+ ANIL+ N V K++D GLARL+ + + A + PE G
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA-----RQGAKFPIKWTAPEAALYG 190
Query: 410 MLTTKSDIYSFGIMLLQIIT---ARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
T KSD++SFGI+L ++ T P + V +E+G P E E
Sbjct: 191 RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPECPE 242
Query: 467 SFSKLAIQCAELRKKDRPDL 486
S L QC ++RP
Sbjct: 243 SLHDLMCQCWRKDPEERPTF 262
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 123/262 (46%), Gaps = 33/262 (12%)
Query: 235 MKIGEGGYGPVYRGKLDHTP-VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+K+G+G +G V+ G + T VAIK L+P F QE +V+ +RH +V L
Sbjct: 24 VKLGQGCFGEVWMGTWNGTTRVAIKTLKP-GTMSPEAFLQEAQVMKKLRHEKLVQLYAVV 82
Query: 294 ---PDYGCLVYEYMHNGSLEDRLL-RRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM G L D L G +P + +AA+IA+ + ++ +
Sbjct: 83 SEEPIY--IVTEYMSKGCLLDFLKGEMGKYLRLP--QLVDMAAQIASGMAYVERMN---Y 135
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPS--VADSVTQYHMTSAAGTFCYIDPEYQQ 407
VHRDL+ ANIL+ N V K++D GLARL+ + A ++ + A PE
Sbjct: 136 VHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTA-------PEAAL 188
Query: 408 TGMLTTKSDIYSFGIMLLQIIT---ARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEA 464
G T KSD++SFGI+L ++ T P + V +E+G P E
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC--------PPEC 240
Query: 465 AESFSKLAIQCAELRKKDRPDL 486
ES L QC ++RP
Sbjct: 241 PESLHDLMCQCWRKDPEERPTF 262
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 123/258 (47%), Gaps = 37/258 (14%)
Query: 236 KIGEGGYGPVYRGKLD-HTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC- 293
K+G G +G V+ + HT VA+K ++P + F E V+ +++H +V L
Sbjct: 189 KLGAGQFGEVWMATYNKHTKVAVKTMKP-GSMSVEAFLAEANVMKTLQHDKLVKLHAVVT 247
Query: 294 --PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
P Y ++ E+M GSL D L+ P K +A+IA + F+ Q +H
Sbjct: 248 KEPIY--IITEFMAKGSLLD-FLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIH 301
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGML 411
RDL+ ANIL+ + V KI+D GLAR+ A + PE G
Sbjct: 302 RDLRAANILVSASLVCKIADFGLARV---------------GAKFPIKWTAPEAINFGSF 346
Query: 412 TTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLAEMLDPAVTDWPAEAAESF 468
T KSD++SFGI+L++I+T R P G+++ V RA+E+G P E
Sbjct: 347 TIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPR--------PENCPEEL 398
Query: 469 SKLAIQCAELRKKDRPDL 486
+ ++C + R ++RP
Sbjct: 399 YNIMMRCWKNRPEERPTF 416
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 144/306 (47%), Gaps = 49/306 (16%)
Query: 208 ALANNDVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKL--DHTPVAIKVLRPDAA 265
LA+N++ Y K +IG+GG+G V++G+L D + VAIK L +
Sbjct: 15 TLADNEIEYEK-----------------QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDS 57
Query: 266 QGK-------RQFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGN 318
+G+ ++FQ+EV ++S++ HPN+V L G + +V E++ G L RLL + +
Sbjct: 58 EGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAH 117
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANIL---LDRN--YVSKISDVG 373
I W + ++ +IA + ++ P P+VHRDL+ NI LD N +K++D G
Sbjct: 118 P--IKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174
Query: 374 LARLVPPSVADSVTQYHMTSAAGTFCYIDPEY--QQTGMLTTKSDIYSFGIMLLQIITAR 431
L++ SV + ++ G F ++ PE + T K+D YSF ++L I+T
Sbjct: 175 LSQ-------QSV--HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
Query: 432 SPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIV 491
P + E L P + P + + C K RP + IV
Sbjct: 226 GPFDEYSYGKIKFINMIREEGLRPTI---PEDCPPRLRNVIELCWSGDPKKRPHF-SYIV 281
Query: 492 PELNRL 497
EL+ L
Sbjct: 282 KELSEL 287
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 77 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 130
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTFTAH--AGAKFPIKWTAPESLAYN 185
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDPSQVYELLEKDYRMERPEGCPEKV 239
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 240 YELMRACWQWNPSDRPSFAEI 260
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 77 TREPPFY--IIIEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 130
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTXTAH--AGAKFPIKWTAPESLAYN 185
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDPSQVYELLEKDYRMERPEGCPEKV 239
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 240 YELMRACWQWNPSDRPSFAEI 260
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 79 TREPPFY--IIIEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 187
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 241
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 242 YELMRACWQWNPSDRPSFAEI 262
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 79 TREPPFY--IIIEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 187
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 241
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 242 YELMRACWQWNPSDRPSFAEI 262
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 84 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 137
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 192
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 246
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 247 YELMRACWQWNPSDRPSFAEI 267
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 79 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 187
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 241
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 242 YELMRACWQWNPSDRPSFAEI 262
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 79 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 132
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 187
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 241
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 242 YELMRACWQWNPSDRPSFAEI 262
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 80 TREPPFY--IIIEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 133
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTXTAH--AGAKFPIKWTAPESLAYN 188
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 189 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 242
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 243 YELMRACWQWNPSDRPSFAEI 263
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 91
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 92 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 145
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 200
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 201 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 254
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 255 YELMRACWQWNPSDRPSFAEI 275
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + + +F +E V+ I+HPN+V LLG C
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 81 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 134
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 189
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 190 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 243
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 244 YELMRACWQWNPSDRPSFAEI 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 81 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 134
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 189
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 190 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 243
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 244 YELMRACWQWNPSDRPSFAEI 264
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 84 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 192
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 246
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 247 YELMRACWQWNPSDRPSFAEI 267
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + + +F +E V+ I+HPN+V LLG C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 84 TREPPFY--IIIEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 192
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 246
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 247 YELMRACWQWNPSDRPSFAEI 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + + +F +E V+ I+HPN+V LLG C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 84 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 192
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 246
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 247 YELMRACWQWNPSDRPSFAEI 267
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G +G VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 76
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 77 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 130
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTXTAH--AGAKFPIKWTAPESLAYN 185
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 186 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDPSQVYELLEKDYRMERPEGCPEKV 239
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 240 YELMRACWQWNPSDRPSFAEI 260
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + + +F +E V+ I+HPN+V LLG C
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 83
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 84 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 137
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTXTAH--AGAKFPIKWTAPESLAYN 192
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 193 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 246
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 247 YELMRACWQWNPSDRPSFAEI 267
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/260 (31%), Positives = 123/260 (47%), Gaps = 29/260 (11%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 97
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y +V EYM G+L D LR N + +A +I++A+ +L +
Sbjct: 98 TLEPPFY--IVTEYMPYGNLLD-YLRECNREEVTAVVLLYMATQISSAMEYLEKKN---F 151
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N+V K++D GL+RL+ D+ T + A + PE
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 206
Query: 410 MLTTKSDIYSFGIMLLQIIT-ARSPM-GL-THHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
+ KSD+++FG++L +I T SP G+ V +EKG E P
Sbjct: 207 TFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQ--------PEGCPP 258
Query: 467 SFSKLAIQCAELRKKDRPDL 486
+L C + DRP
Sbjct: 259 KVYELMRACWKWSPADRPSF 278
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 82
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 83 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 136
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 191
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 192 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 245
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 246 YELMRACWQWNPSDRPSFAEI 266
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + + +F +E V+ I+HPN+V LLG C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 79 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 132
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 187
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 241
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 242 YELMRACWQWNPSDRPSFAEI 262
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 208 ALANNDVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKL--DHTPVAIKVLRPDAA 265
LA+N++ Y K +IG+GG+G V++G+L D + VAIK L +
Sbjct: 15 TLADNEIEYEK-----------------QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDS 57
Query: 266 QGK-------RQFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGN 318
+G+ ++FQ+EV ++S++ HPN+V L G + +V E++ G L RLL + +
Sbjct: 58 EGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAH 117
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANIL---LDRN--YVSKISDVG 373
I W + ++ +IA + ++ P P+VHRDL+ NI LD N +K++D G
Sbjct: 118 P--IKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174
Query: 374 LARLVPPSVADSVTQYHMTSAAGTFCYIDPEY--QQTGMLTTKSDIYSFGIMLLQIITAR 431
++ SV + ++ G F ++ PE + T K+D YSF ++L I+T
Sbjct: 175 TSQ-------QSV--HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
Query: 432 SPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIV 491
P + E L P + P + + C K RP + IV
Sbjct: 226 GPFDEYSYGKIKFINMIREEGLRPTI---PEDCPPRLRNVIELCWSGDPKKRPHF-SYIV 281
Query: 492 PELNRL 497
EL+ L
Sbjct: 282 KELSEL 287
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/258 (29%), Positives = 125/258 (48%), Gaps = 27/258 (10%)
Query: 236 KIGEGGYGPVYRGKLD-HTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC- 293
++G G +G V+ G + +T VAIK L+P F +E +++ ++H +V L
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKP-GTMSPESFLEEAQIMKKLKHDKLVQLYAVVS 74
Query: 294 --PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
P Y +V EYM+ GSL D L+ G + +AA++A + ++ + +H
Sbjct: 75 EEPIY--IVTEYMNKGSLLD-FLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIH 128
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGML 411
RDL+ ANIL+ + KI+D GLARL+ + + A + PE G
Sbjct: 129 RDLRSANILVGNGLICKIADFGLARLIEDNEXTA-----RQGAKFPIKWTAPEAALYGRF 183
Query: 412 TTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLAEMLDPAVTDWPAEAAESF 468
T KSD++SFGI+L +++T R P G+ + V +E+G P D P S
Sbjct: 184 TIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRM----PCPQDCPI----SL 235
Query: 469 SKLAIQCAELRKKDRPDL 486
+L I C + ++RP
Sbjct: 236 HELMIHCWKKDPEERPTF 253
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + + +F +E V+ I+HPN+V LLG C
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVC 78
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 79 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 132
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDL N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 187
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 188 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 241
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 242 YELMRACWQWNPSDRPSFAEI 262
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 143/306 (46%), Gaps = 49/306 (16%)
Query: 208 ALANNDVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKL--DHTPVAIKVLRPDAA 265
LA+N++ Y K +IG+GG+G V++G+L D + VAIK L +
Sbjct: 15 TLADNEIEYEK-----------------QIGKGGFGLVHKGRLVKDKSVVAIKSLILGDS 57
Query: 266 QGK-------RQFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGN 318
+G+ ++FQ+EV ++S++ HPN+V L G + +V E++ G L RLL + +
Sbjct: 58 EGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAH 117
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANIL---LDRN--YVSKISDVG 373
I W + ++ +IA + ++ P P+VHRDL+ NI LD N +K++D
Sbjct: 118 P--IKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCAKVADFS 174
Query: 374 LARLVPPSVADSVTQYHMTSAAGTFCYIDPEY--QQTGMLTTKSDIYSFGIMLLQIITAR 431
L++ SV + ++ G F ++ PE + T K+D YSF ++L I+T
Sbjct: 175 LSQ-------QSV--HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
Query: 432 SPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIV 491
P + E L P + P + + C K RP + IV
Sbjct: 226 GPFDEYSYGKIKFINMIREEGLRPTI---PEDCPPRLRNVIELCWSGDPKKRPHF-SYIV 281
Query: 492 PELNRL 497
EL+ L
Sbjct: 282 KELSEL 287
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 25/261 (9%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 285
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 286 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---F 339
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HR+L N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 394
Query: 410 MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAESF 468
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 395 KFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPEKV 448
Query: 469 SKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 449 YELMRACWQWNPSDRPSFAEI 469
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 127/263 (48%), Gaps = 29/263 (11%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 80
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 81 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 134
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC--YIDPEYQQ 407
+HRDL N L+ N++ K++D GL+RL+ D+ T A F + PE
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYT----APAGAKFPIKWTAPESLA 187
Query: 408 TGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAE 466
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 188 YNKFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPE 241
Query: 467 SFSKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 242 KVYELMRACWQWNPSDRPSFAEI 264
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 127/263 (48%), Gaps = 29/263 (11%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 79
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 80 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 133
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC--YIDPEYQQ 407
+HRDL N L+ N++ K++D GL+RL+ D+ T A F + PE
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYT----APAGAKFPIKWTAPESLA 186
Query: 408 TGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAE 466
+ KSD+++FG++L +I T G++ + I+ + E+L+ + P E
Sbjct: 187 YNKFSIKSDVWAFGVLLWEIAT----YGMSPY--PGIDLSQVYELLEKDYRMERPEGCPE 240
Query: 467 SFSKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 241 KVYELMRACWQWNPSDRPSFAEI 263
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 27/262 (10%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 282
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 283 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 336
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HR+L N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 391
Query: 410 MLTTKSDIYSFGIMLLQIIT-ARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAES 467
+ KSD+++FG++L +I T SP I+ + E+L+ + P E
Sbjct: 392 KFSIKSDVWAFGVLLWEIATYGMSPY-------PGIDLSQVYELLEKDYRMERPEGCPEK 444
Query: 468 FSKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 445 VYELMRACWQWNPSDRPSFAEI 466
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 125/262 (47%), Gaps = 27/262 (10%)
Query: 236 KIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+G G YG VY G K VA+K L+ D + +F +E V+ I+HPN+V LLG C
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVC 324
Query: 294 ----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M G+L D LR N + +A +I++A+ +L +
Sbjct: 325 TREPPFY--IITEFMTYGNLLD-YLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---F 378
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HR+L N L+ N++ K++D GL+RL+ D+ T + A + PE
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAH--AGAKFPIKWTAPESLAYN 433
Query: 410 MLTTKSDIYSFGIMLLQIIT-ARSPMGLTHHVSRAIEKGTLAEMLDPAV-TDWPAEAAES 467
+ KSD+++FG++L +I T SP I+ + E+L+ + P E
Sbjct: 434 KFSIKSDVWAFGVLLWEIATYGMSPY-------PGIDLSQVYELLEKDYRMERPEGCPEK 486
Query: 468 FSKLAIQCAELRKKDRPDLGTV 489
+L C + DRP +
Sbjct: 487 VYELMRACWQWNPSDRPSFAEI 508
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 132/276 (47%), Gaps = 39/276 (14%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKLD-HTPVAIKVLR-----PDAAQGKRQFQQEVE 276
E+ T K E ++G G +G V+ G + HT VA+K L+ PDA F E
Sbjct: 17 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEAN 68
Query: 277 VLSSIRHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
++ ++H +V L P Y ++ EYM NGSL D L+ + + K +AA+
Sbjct: 69 LMKQLQHQRLVRLYAVVTQEPIY--IITEYMENGSLVD-FLKTPSGIKLTINKLLDMAAQ 125
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
IA + F+ + +HRDL+ ANIL+ KI+D GLARL+ + +
Sbjct: 126 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-----REG 177
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLA 450
A + PE G T KSD++SFGI+L +I+T R P G+T+ V + +E+G
Sbjct: 178 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG--Y 235
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
M+ P E +L C + R +DRP
Sbjct: 236 RMVR------PDNCPEELYQLMRLCWKERPEDRPTF 265
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 132/276 (47%), Gaps = 39/276 (14%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKLD-HTPVAIKVLR-----PDAAQGKRQFQQEVE 276
E+ T K E ++G G +G V+ G + HT VA+K L+ PDA F E
Sbjct: 15 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEAN 66
Query: 277 VLSSIRHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
++ ++H +V L P Y ++ EYM NGSL D L+ + + K +AA+
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPIY--IITEYMENGSLVD-FLKTPSGIKLTINKLLDMAAQ 123
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
IA + F+ + +HRDL+ ANIL+ KI+D GLARL+ + +
Sbjct: 124 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-----REG 175
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLA 450
A + PE G T KSD++SFGI+L +I+T R P G+T+ V + +E+G
Sbjct: 176 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG--Y 233
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
M+ P E +L C + R +DRP
Sbjct: 234 RMVR------PDNCPEELYQLMRLCWKERPEDRPTF 263
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 132/276 (47%), Gaps = 39/276 (14%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKLD-HTPVAIKVLR-----PDAAQGKRQFQQEVE 276
E+ T K E ++G G +G V+ G + HT VA+K L+ PDA F E
Sbjct: 10 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEAN 61
Query: 277 VLSSIRHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
++ ++H +V L P Y ++ EYM NGSL D L+ + + K +AA+
Sbjct: 62 LMKQLQHQRLVRLYAVVTQEPIY--IITEYMENGSLVD-FLKTPSGIKLTINKLLDMAAQ 118
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
IA + F+ + +HRDL+ ANIL+ KI+D GLARL+ + +
Sbjct: 119 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-----REG 170
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLA 450
A + PE G T KSD++SFGI+L +I+T R P G+T+ V + +E+G
Sbjct: 171 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG--Y 228
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
M+ P E +L C + R +DRP
Sbjct: 229 RMVR------PDNCPEELYQLMRLCWKERPEDRPTF 258
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 132/276 (47%), Gaps = 39/276 (14%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKLD-HTPVAIKVLR-----PDAAQGKRQFQQEVE 276
E+ T K E ++G G +G V+ G + HT VA+K L+ PDA F E
Sbjct: 9 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEAN 60
Query: 277 VLSSIRHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
++ ++H +V L P Y ++ EYM NGSL D L+ + + K +AA+
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIY--IITEYMENGSLVD-FLKTPSGIKLTINKLLDMAAQ 117
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
IA + F+ + +HRDL+ ANIL+ KI+D GLARL+ + +
Sbjct: 118 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-----REG 169
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLA 450
A + PE G T KSD++SFGI+L +I+T R P G+T+ V + +E+G
Sbjct: 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG--Y 227
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
M+ P E +L C + R +DRP
Sbjct: 228 RMVR------PDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 133/277 (48%), Gaps = 41/277 (14%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKLD-HTPVAIKVLR-----PDAAQGKRQFQQEVE 276
E+ T K E ++G G +G V+ G + HT VA+K L+ PDA F E
Sbjct: 14 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEAN 65
Query: 277 VLSSIRHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
++ ++H +V L P Y ++ EYM NGSL D L+ + + K +AA+
Sbjct: 66 LMKQLQHQRLVRLYAVVTQEPIY--IITEYMENGSLVD-FLKTPSGIKLTINKLLDMAAQ 122
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
IA + F+ + +HRDL+ ANIL+ KI+D GLARL+ + +Y
Sbjct: 123 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDN------EYTARE 173
Query: 394 AAGT-FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTL 449
A + PE G T KSD++SFGI+L +I+T R P G+T+ V + +E+G
Sbjct: 174 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-- 231
Query: 450 AEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
M+ P E +L C + R +DRP
Sbjct: 232 YRMVR------PDNCPEELYQLMRLCWKERPEDRPTF 262
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 132/276 (47%), Gaps = 39/276 (14%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKLD-HTPVAIKVLR-----PDAAQGKRQFQQEVE 276
E+ T K E ++G G +G V+ G + HT VA+K L+ PDA F E
Sbjct: 19 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEAN 70
Query: 277 VLSSIRHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
++ ++H +V L P Y ++ EYM NGSL D L+ + + K +AA+
Sbjct: 71 LMKQLQHQRLVRLYAVVTQEPIY--IITEYMENGSLVD-FLKTPSGIKLTINKLLDMAAQ 127
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
IA + F+ + +HRDL+ ANIL+ KI+D GLARL+ + +
Sbjct: 128 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-----REG 179
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLA 450
A + PE G T KSD++SFGI+L +I+T R P G+T+ V + +E+G
Sbjct: 180 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG--Y 237
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
M+ P E +L C + R +DRP
Sbjct: 238 RMVR------PDNCPEELYQLMRLCWKERPEDRPTF 267
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 132/276 (47%), Gaps = 39/276 (14%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKLD-HTPVAIKVLR-----PDAAQGKRQFQQEVE 276
E+ T K E ++G G +G V+ G + HT VA+K L+ PDA F E
Sbjct: 18 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEAN 69
Query: 277 VLSSIRHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
++ ++H +V L P Y ++ EYM NGSL D L+ + + K +AA+
Sbjct: 70 LMKQLQHQRLVRLYAVVTQEPIY--IITEYMENGSLVD-FLKTPSGIKLTINKLLDMAAQ 126
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
IA + F+ + +HRDL+ ANIL+ KI+D GLARL+ + +
Sbjct: 127 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-----REG 178
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLA 450
A + PE G T KSD++SFGI+L +I+T R P G+T+ V + +E+G
Sbjct: 179 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG--Y 236
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
M+ P E +L C + R +DRP
Sbjct: 237 RMVR------PDNCPEELYQLMRLCWKERPEDRPTF 266
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 132/276 (47%), Gaps = 39/276 (14%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKLD-HTPVAIKVLR-----PDAAQGKRQFQQEVE 276
E+ T K E ++G G +G V+ G + HT VA+K L+ PDA F E
Sbjct: 11 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEAN 62
Query: 277 VLSSIRHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
++ ++H +V L P Y ++ EYM NGSL D L+ + + K +AA+
Sbjct: 63 LMKQLQHQRLVRLYAVVTQEPIY--IITEYMENGSLVD-FLKTPSGIKLTINKLLDMAAQ 119
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
IA + F+ + +HRDL+ ANIL+ KI+D GLARL+ + +
Sbjct: 120 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-----REG 171
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLA 450
A + PE G T KSD++SFGI+L +I+T R P G+T+ V + +E+G
Sbjct: 172 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG--Y 229
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
M+ P E +L C + R +DRP
Sbjct: 230 RMVR------PDNCPEELYQLMRLCWKERPEDRPTF 259
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 132/276 (47%), Gaps = 39/276 (14%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKLD-HTPVAIKVLR-----PDAAQGKRQFQQEVE 276
E+ T K E ++G G +G V+ G + HT VA+K L+ PDA F E
Sbjct: 9 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEAN 60
Query: 277 VLSSIRHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
++ ++H +V L P Y ++ EYM NGSL D L+ + + K +AA+
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIY--IITEYMENGSLVD-FLKTPSGIKLTINKLLDMAAQ 117
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
IA + F+ + +HRDL+ ANIL+ KI+D GLARL+ + +
Sbjct: 118 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTA-----REG 169
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLA 450
A + PE G T KSD++SFGI+L +I+T R P G+T+ V + +E+G
Sbjct: 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG--Y 227
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
M+ P E +L C + R +DRP
Sbjct: 228 RMVR------PDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 132/276 (47%), Gaps = 39/276 (14%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKLD-HTPVAIKVLR-----PDAAQGKRQFQQEVE 276
E+ T K E ++G G +G V+ G + HT VA+K L+ PDA F E
Sbjct: 15 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEAN 66
Query: 277 VLSSIRHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
++ ++H +V L P Y ++ EYM NGSL D L+ + + K +AA+
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPIY--IITEYMENGSLVD-FLKTPSGIKLTINKLLDMAAQ 123
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
IA + F+ + +HRDL+ ANIL+ KI+D GLARL+ + +
Sbjct: 124 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA-----REG 175
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLA 450
A + PE G T KSD++SFGI+L +I+T R P G+T+ V + +E+G
Sbjct: 176 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG--Y 233
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
M+ P E +L C + R +DRP
Sbjct: 234 RMVR------PDNCPEELYQLMRLCWKERPEDRPTF 263
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 133/277 (48%), Gaps = 41/277 (14%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKLD-HTPVAIKVLR-----PDAAQGKRQFQQEVE 276
E+ T K E ++G G +G V+ G + HT VA+K L+ PDA F E
Sbjct: 9 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEAN 60
Query: 277 VLSSIRHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
++ ++H +V L P Y ++ EYM NGSL D L+ + + K +AA+
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIY--IITEYMENGSLVD-FLKTPSGIKLTINKLLDMAAQ 117
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
IA + F+ + +HRDL+ ANIL+ KI+D GLARL+ + +Y
Sbjct: 118 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDN------EYTARE 168
Query: 394 AAGT-FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTL 449
A + PE G T KSD++SFGI+L +I+T R P G+T+ V + +E+G
Sbjct: 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-- 226
Query: 450 AEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
M+ P E +L C + R +DRP
Sbjct: 227 YRMVR------PDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/277 (31%), Positives = 133/277 (48%), Gaps = 41/277 (14%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKLD-HTPVAIKVLR-----PDAAQGKRQFQQEVE 276
E+ T K E ++G G +G V+ G + HT VA+K L+ PDA F E
Sbjct: 4 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEAN 55
Query: 277 VLSSIRHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
++ ++H +V L P Y ++ EYM NGSL D L+ + + K +AA+
Sbjct: 56 LMKQLQHQRLVRLYAVVTQEPIY--IITEYMENGSLVD-FLKTPSGIKLTINKLLDMAAQ 112
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
IA + F+ + +HRDL+ ANIL+ KI+D GLARL+ + +Y
Sbjct: 113 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDN------EYTARE 163
Query: 394 AAGT-FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTL 449
A + PE G T KSD++SFGI+L +I+T R P G+T+ V + +E+G
Sbjct: 164 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-- 221
Query: 450 AEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
M+ P E +L C + R +DRP
Sbjct: 222 YRMVR------PDNCPEELYQLMRLCWKERPEDRPTF 252
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 20/200 (10%)
Query: 236 KIGEGGYGPVYRGK-LDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGACP 294
+IG G +G V+ G L+ VAIK +R + A + F +E EV+ + HP +V L G C
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 295 DYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHR 352
+ CLV+E+M +G L D L R + + ++ + +L +A ++HR
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAS---VIHR 127
Query: 353 DLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT---FCYIDPEYQQTG 409
DL N L+ N V K+SD G+ R V QY TS+ GT + PE
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDD------QY--TSSTGTKFPVKWASPEVFSFS 179
Query: 410 MLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ ++ +
Sbjct: 180 RYSSKSDVWSFGVLMWEVFS 199
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 135/279 (48%), Gaps = 27/279 (9%)
Query: 230 KFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+ + +IG G +G VY+GK H VA+K+L A Q + F+ EV VL RH N++
Sbjct: 25 QITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 288 LLLG--ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L +G P +V ++ SL L + +K IA + A + +LH
Sbjct: 84 LFMGYSTAPQL-AIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLH--- 137
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ ++HRDLK NI L + KI D GLA S Q+ S G+ ++ PE
Sbjct: 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLA--TEKSRWSGSHQFEQLS--GSILWMAPEV 193
Query: 406 ---QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIE---KGTLAEMLDPAVTD 459
Q + + +SD+Y+FGI+L +++T + P ++ + IE +G+L+ L ++
Sbjct: 194 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSN 253
Query: 460 WPAEAAESFSKLAIQCAELRKKDRPDLGTVI--VPELNR 496
P + +L +C + ++ +RP ++ + EL R
Sbjct: 254 CP----KRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 138/284 (48%), Gaps = 27/284 (9%)
Query: 230 KFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+ + +IG G +G VY+GK H VA+K+L A Q + F+ EV VL RH N++
Sbjct: 25 QITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 83
Query: 288 LLLG-ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
L +G + +V ++ SL L + +K IA + A + +LH
Sbjct: 84 LFMGYSTKPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLH---A 138
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY- 405
+ ++HRDLK NI L + KI D GLA S Q+ S G+ ++ PE
Sbjct: 139 KSIIHRDLKSNNIFLHEDNTVKIGDFGLA--TEKSRWSGSHQFEQLS--GSILWMAPEVI 194
Query: 406 --QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIE---KGTLAEMLDPAVTDW 460
Q + + +SD+Y+FGI+L +++T + P ++ + IE +G+L+ L ++
Sbjct: 195 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC 254
Query: 461 PAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKDLGRKL 504
P + +L +C + ++ +RP + L +++L R+L
Sbjct: 255 P----KRMKRLMAECLKKKRDERPSFPRI----LAEIEELAREL 290
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 139/284 (48%), Gaps = 27/284 (9%)
Query: 230 KFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+ + +IG G +G VY+GK H VA+K+L A Q + F+ EV VL RH N++
Sbjct: 13 QITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 71
Query: 288 LLLG-ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
L +G + +V ++ SL L + +K IA + A + +LH
Sbjct: 72 LFMGYSTKPQLAIVTQWCEGSSLYHHL--HASETKFEMKKLIDIARQTARGMDYLH---A 126
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY- 405
+ ++HRDLK NI L + KI D GLA + S Q+ S G+ ++ PE
Sbjct: 127 KSIIHRDLKSNNIFLHEDNTVKIGDFGLATV--KSRWSGSHQFEQLS--GSILWMAPEVI 182
Query: 406 --QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIE---KGTLAEMLDPAVTDW 460
Q + + +SD+Y+FGI+L +++T + P ++ + IE +G+L+ L ++
Sbjct: 183 RMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNC 242
Query: 461 PAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKDLGRKL 504
P + +L +C + ++ +RP + L +++L R+L
Sbjct: 243 P----KRMKRLMAECLKKKRDERPSFPRI----LAEIEELAREL 278
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 20/200 (10%)
Query: 236 KIGEGGYGPVYRGK-LDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGACP 294
+IG G +G V+ G L+ VAIK +R + A + F +E EV+ + HP +V L G C
Sbjct: 17 EIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 75
Query: 295 DYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHR 352
+ CLV+E+M +G L D L R + + ++ + +L +A ++HR
Sbjct: 76 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHR 130
Query: 353 DLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT---FCYIDPEYQQTG 409
DL N L+ N V K+SD G+ R V QY TS+ GT + PE
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDD------QY--TSSTGTKFPVKWASPEVFSFS 182
Query: 410 MLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ ++ +
Sbjct: 183 RYSSKSDVWSFGVLMWEVFS 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 20/200 (10%)
Query: 236 KIGEGGYGPVYRGK-LDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGACP 294
+IG G +G V+ G L+ VAIK +R + A + F +E EV+ + HP +V L G C
Sbjct: 14 EIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 72
Query: 295 DYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHR 352
+ CLV+E+M +G L D L R + + ++ + +L +A ++HR
Sbjct: 73 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHR 127
Query: 353 DLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT---FCYIDPEYQQTG 409
DL N L+ N V K+SD G+ R V QY TS+ GT + PE
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDD------QY--TSSTGTKFPVKWASPEVFSFS 179
Query: 410 MLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ ++ +
Sbjct: 180 RYSSKSDVWSFGVLMWEVFS 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 20/200 (10%)
Query: 236 KIGEGGYGPVYRGK-LDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGACP 294
+IG G +G V+ G L+ VAIK +R + A + F +E EV+ + HP +V L G C
Sbjct: 12 EIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 70
Query: 295 DYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHR 352
+ CLV+E+M +G L D L R + + ++ + +L +A ++HR
Sbjct: 71 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHR 125
Query: 353 DLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT---FCYIDPEYQQTG 409
DL N L+ N V K+SD G+ R V QY TS+ GT + PE
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDD------QY--TSSTGTKFPVKWASPEVFSFS 177
Query: 410 MLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ ++ +
Sbjct: 178 RYSSKSDVWSFGVLMWEVFS 197
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 130/276 (47%), Gaps = 39/276 (14%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKLD-HTPVAIKVLR-----PDAAQGKRQFQQEVE 276
E+ T K E ++G G G V+ G + HT VA+K L+ PDA F E
Sbjct: 9 EVPRETLKLVE--RLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEAN 60
Query: 277 VLSSIRHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
++ ++H +V L P Y ++ EYM NGSL D L+ + + K +AA+
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPIY--IITEYMENGSLVD-FLKTPSGIKLTINKLLDMAAQ 117
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
IA + F+ + +HRDL+ ANIL+ KI+D GLARL+ +
Sbjct: 118 IAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLI-----EDAEXTAREG 169
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTLA 450
A + PE G T KSD++SFGI+L +I+T R P G+T+ V + +E+G
Sbjct: 170 AKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGY-- 227
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
M+ P E +L C + R +DRP
Sbjct: 228 RMVR------PDNCPEELYQLMRLCWKERPEDRPTF 257
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 28/222 (12%)
Query: 228 TDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKR---QFQQEVEVLSSIR 282
+D++ +G GG V+ R DH VA+KVLR D A+ +F++E + +++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 283 HPNMVLLL---------GACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
HP +V + G P +V EY+ +L D + G P+ P R ++ A+
Sbjct: 71 HPAIVAVYDTGEAETPAGPLP---YIVMEYVDGVTLRDIVHTEG--PMTPKRA-IEVIAD 124
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
AL F HQ ++HRD+KPANIL+ K+ D G+AR ++ADS T+
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIAR----AIADSGNSVXQTA 177
Query: 394 AA-GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
A GT Y+ PE + + +SD+YS G +L +++T P
Sbjct: 178 AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 133/277 (48%), Gaps = 41/277 (14%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKLD-HTPVAIKVLR-----PDAAQGKRQFQQEVE 276
E+ T K E ++G G +G V+ G + HT VA+K L+ PDA F E
Sbjct: 5 EVPRETLKLVE--RLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA------FLAEAN 56
Query: 277 VLSSIRHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
++ ++H +V L P Y ++ EYM NGSL D L+ + + K +AA+
Sbjct: 57 LMKQLQHQRLVRLYAVVTQEPIY--IITEYMENGSLVD-FLKTPSGIKLTINKLLDMAAQ 113
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
IA + F+ + +HR+L+ ANIL+ KI+D GLARL+ + +Y
Sbjct: 114 IAEGMAFIEERN---YIHRNLRAANILVSDTLSCKIADFGLARLIEDN------EYTARE 164
Query: 394 AAGT-FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTH-HVSRAIEKGTL 449
A + PE G T KSD++SFGI+L +I+T R P G+T+ V + +E+G
Sbjct: 165 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG-- 222
Query: 450 AEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
M+ P E +L C + R +DRP
Sbjct: 223 YRMVR------PDNCPEELYQLMRLCWKERPEDRPTF 253
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 26/221 (11%)
Query: 228 TDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKR---QFQQEVEVLSSIR 282
+D++ +G GG V+ R DH VA+KVLR D A+ +F++E + +++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 283 HPNMVLLL---------GACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
HP +V + G P +V EY+ +L D + G P+ P R ++ A+
Sbjct: 71 HPAIVAVYDTGEAETPAGPLP---YIVMEYVDGVTLRDIVHTEG--PMTPKRA-IEVIAD 124
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
AL F HQ ++HRD+KPANI++ K+ D G+AR + S +SVTQ +
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS-GNSVTQ--TAA 178
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
GT Y+ PE + + +SD+YS G +L +++T P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 26/221 (11%)
Query: 228 TDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKR---QFQQEVEVLSSIR 282
+D++ +G GG V+ R DH VA+KVLR D A+ +F++E + +++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 283 HPNMVLLL---------GACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
HP +V + G P +V EY+ +L D + G P+ P R ++ A+
Sbjct: 71 HPAIVAVYDTGEAETPAGPLP---YIVMEYVDGVTLRDIVHTEG--PMTPKRA-IEVIAD 124
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
AL F HQ ++HRD+KPANI++ K+ D G+AR + S +SVTQ +
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS-GNSVTQ--TAA 178
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
GT Y+ PE + + +SD+YS G +L +++T P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 20/200 (10%)
Query: 236 KIGEGGYGPVYRGK-LDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGACP 294
+IG G +G V+ G L+ VAIK +R + A + F +E EV+ + HP +V L G C
Sbjct: 15 EIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCL 73
Query: 295 DYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHR 352
+ CLV E+M +G L D L R + + ++ + +L +A ++HR
Sbjct: 74 EQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHR 128
Query: 353 DLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT---FCYIDPEYQQTG 409
DL N L+ N V K+SD G+ R V QY TS+ GT + PE
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDD------QY--TSSTGTKFPVKWASPEVFSFS 180
Query: 410 MLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ ++ +
Sbjct: 181 RYSSKSDVWSFGVLMWEVFS 200
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 124/268 (46%), Gaps = 32/268 (11%)
Query: 237 IGEGGYGPVYRGKLD------HTPVAIKVLRPDAAQGKR-QFQQEVEVLSSIRHPNMVLL 289
IG G +G VY+G L PVAIK L+ + +R F E ++ H N++ L
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRL 111
Query: 290 LGACPDYG--CLVYEYMHNGSLEDRLLRR--GNTPVIPWRKRFKIAAEIATALLFLHQAK 345
G Y ++ EYM NG+L D+ LR G V+ + + IA + +L
Sbjct: 112 EGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVL---QLVGMLRGIAAGMKYLANMN 167
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
VHRDL NIL++ N V K+SD GL+R++ D Y + + PE
Sbjct: 168 ---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED---DPEATYTTSGGKIPIRWTAPEA 221
Query: 406 QQTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPA 462
T+ SD++SFGI++ +++T R L++H V +AI G P D P+
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRL----PTPMDCPS 277
Query: 463 EAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L +QC + + RP ++
Sbjct: 278 ----AIYQLMMQCWQQERARRPKFADIV 301
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 20/200 (10%)
Query: 236 KIGEGGYGPVYRGK-LDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGACP 294
+IG G +G V+ G L+ VAIK ++ + + + F +E EV+ + HP +V L G C
Sbjct: 34 EIGSGQFGLVHLGYWLNKDKVAIKTIK-EGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCL 92
Query: 295 DYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHR 352
+ CLV+E+M +G L D L R + + ++ + +L +A ++HR
Sbjct: 93 EQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHR 147
Query: 353 DLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT---FCYIDPEYQQTG 409
DL N L+ N V K+SD G+ R V QY TS+ GT + PE
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDD------QY--TSSTGTKFPVKWASPEVFSFS 199
Query: 410 MLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ ++ +
Sbjct: 200 RYSSKSDVWSFGVLMWEVFS 219
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 144/317 (45%), Gaps = 54/317 (17%)
Query: 220 TIEEIEEATD-KFSEAMKIGEGGYGPVYRGKLDHTPV----AIKVLRPDAAQG-KRQFQQ 273
TI + + D KF + IGEG +G V + ++ + AIK ++ A++ R F
Sbjct: 7 TIYPVLDWNDIKFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG 64
Query: 274 EVEVLSSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRG 317
E+EVL + HPN++ LLGAC G L EY +G+L D L +
Sbjct: 65 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 124
Query: 318 NTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARL 377
+ ++ AA++A + +L Q + +HRDL NIL+ NYV+KI+D GL+R
Sbjct: 125 TASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRG 181
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLT 437
V ++ + + ++ E + TT SD++S+G++L +I++ +G T
Sbjct: 182 QEVYVKKTMGRLPVR-------WMAIESLNYSVYTTNSDVWSYGVLLWEIVS----LGGT 230
Query: 438 HHVSRAIEKGTLAEMLDPAVTDW----PAEAAESFSKLAIQCAELRKKDRPDLGTVIVPE 493
+ T AE+ + + P + L QC + +RP ++V
Sbjct: 231 PYCGM-----TCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV-- 283
Query: 494 LNRLKDLGRKLESNKSY 510
L R LE K+Y
Sbjct: 284 -----SLNRMLEERKTY 295
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 144/317 (45%), Gaps = 54/317 (17%)
Query: 220 TIEEIEEATD-KFSEAMKIGEGGYGPVYRGKLDHTPV----AIKVLRPDAAQG-KRQFQQ 273
TI + + D KF + IGEG +G V + ++ + AIK ++ A++ R F
Sbjct: 17 TIYPVLDWNDIKFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG 74
Query: 274 EVEVLSSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRG 317
E+EVL + HPN++ LLGAC G L EY +G+L D L +
Sbjct: 75 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 134
Query: 318 NTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARL 377
+ ++ AA++A + +L Q + +HRDL NIL+ NYV+KI+D GL+R
Sbjct: 135 TASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSRG 191
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLT 437
V ++ + + ++ E + TT SD++S+G++L +I++ +G T
Sbjct: 192 QEVYVKKTMGRLPVR-------WMAIESLNYSVYTTNSDVWSYGVLLWEIVS----LGGT 240
Query: 438 HHVSRAIEKGTLAEMLDPAVTDW----PAEAAESFSKLAIQCAELRKKDRPDLGTVIVPE 493
+ T AE+ + + P + L QC + +RP ++V
Sbjct: 241 PYCGM-----TCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV-- 293
Query: 494 LNRLKDLGRKLESNKSY 510
L R LE K+Y
Sbjct: 294 -----SLNRMLEERKTY 305
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 26/221 (11%)
Query: 228 TDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKR---QFQQEVEVLSSIR 282
+D++ +G GG V+ R H VA+KVLR D A+ +F++E + +++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 283 HPNMVLLL---------GACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
HP +V + G P +V EY+ +L D + G P+ P R ++ A+
Sbjct: 71 HPAIVAVYATGEAETPAGPLP---YIVMEYVDGVTLRDIVHTEG--PMTPKRA-IEVIAD 124
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
AL F HQ ++HRD+KPANI++ K+ D G+AR + S +SVTQ +
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS-GNSVTQ--TAA 178
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
GT Y+ PE + + +SD+YS G +L +++T P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 26/221 (11%)
Query: 228 TDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKR---QFQQEVEVLSSIR 282
+D++ +G GG V+ R H VA+KVLR D A+ +F++E + +++
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 283 HPNMVLLL---------GACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
HP +V + G P +V EY+ +L D + G P+ P R ++ A+
Sbjct: 71 HPAIVAVYDTGEAETPAGPLP---YIVMEYVDGVTLRDIVHTEG--PMTPKRA-IEVIAD 124
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
AL F HQ ++HRD+KPANI++ K+ D G+AR + S +SVTQ +
Sbjct: 125 ACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIADS-GNSVTQ--TAA 178
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
GT Y+ PE + + +SD+YS G +L +++T P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 111/221 (50%), Gaps = 26/221 (11%)
Query: 228 TDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKR---QFQQEVEVLSSIR 282
+D++ +G GG V+ R H VA+KVLR D A+ +F++E + +++
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 283 HPNMVLLL---------GACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
HP +V + G P +V EY+ +L D + G P+ P R ++ A+
Sbjct: 88 HPAIVAVYDTGEAETPAGPLP---YIVMEYVDGVTLRDIVHTEG--PMTPKRA-IEVIAD 141
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
AL F HQ ++HRD+KPANI++ K+ D G+AR + S +SVTQ +
Sbjct: 142 ACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADS-GNSVTQ--TAA 195
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
GT Y+ PE + + +SD+YS G +L +++T P
Sbjct: 196 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 21/201 (10%)
Query: 236 KIGEGGYGPVYRGKLDH-TPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC- 293
++G G +G V+ G ++ T VA+K L+P + F +E ++ +++H +V L
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 294 ---PDYGCLVYEYMHNGSLEDRLLR-RGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ EYM GSL D L G ++P K +A+IA + ++ +
Sbjct: 79 REEPIY--IITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN---Y 131
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT-FCYIDPEYQQT 408
+HRDL+ AN+L+ + + KI+D GLAR++ + +Y A + PE
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDN------EYTAREGAKFPIKWTAPEAINF 185
Query: 409 GMLTTKSDIYSFGIMLLQIIT 429
G T KSD++SFGI+L +I+T
Sbjct: 186 GCFTIKSDVWSFGILLYEIVT 206
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 39/294 (13%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLD-------HTPVAIKVLRPDAAQGKR-Q 270
Y +E E A +K + + ++G+G +G VY G T VAIK + A+ +R +
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 74
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDY--GCLVYEYMHNGSLEDRL--LR--RGNTPVI-- 322
F E V+ ++V LLG ++ E M G L+ L LR N PV+
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 134
Query: 323 -PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
K ++A EIA + +L+ K VHRDL N ++ ++ KI D G+ R +
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI--- 188
Query: 382 VADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLT 437
T Y+ G ++ PE + G+ TT SD++SFG++L +I T A P GL+
Sbjct: 189 ---YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
Query: 438 H-HVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ V R + +G L D P + +L C + K RP +I
Sbjct: 246 NEQVLRFVMEGGL--------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 39/294 (13%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLD-------HTPVAIKVLRPDAAQGKR-Q 270
Y +E E A +K + + ++G+G +G VY G T VAIK + A+ +R +
Sbjct: 5 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 64
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDY--GCLVYEYMHNGSLEDRL--LR--RGNTPVI-- 322
F E V+ ++V LLG ++ E M G L+ L LR N PV+
Sbjct: 65 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 124
Query: 323 -PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
K ++A EIA + +L+ K VHRDL N ++ ++ KI D G+ R +
Sbjct: 125 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI--- 178
Query: 382 VADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLT 437
T Y+ G ++ PE + G+ TT SD++SFG++L +I T A P GL+
Sbjct: 179 ---YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 235
Query: 438 H-HVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ V R + +G L D P + +L C + K RP +I
Sbjct: 236 NEQVLRFVMEGGL--------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 281
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/317 (26%), Positives = 144/317 (45%), Gaps = 54/317 (17%)
Query: 220 TIEEIEEATD-KFSEAMKIGEGGYGPVYRGKLDHTPV----AIKVLRPDAAQG-KRQFQQ 273
TI + + D KF + IGEG +G V + ++ + AIK ++ A++ R F
Sbjct: 14 TIYPVLDWNDIKFQDV--IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG 71
Query: 274 EVEVLSSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRG 317
E+EVL + HPN++ LLGAC G L EY +G+L D L +
Sbjct: 72 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 131
Query: 318 NTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARL 377
+ ++ AA++A + +L Q + +HR+L NIL+ NYV+KI+D GL+R
Sbjct: 132 TASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRNLAARNILVGENYVAKIADFGLSRG 188
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLT 437
V ++ + + ++ E + TT SD++S+G++L +I++ +G T
Sbjct: 189 QEVYVKKTMGRLPVR-------WMAIESLNYSVYTTNSDVWSYGVLLWEIVS----LGGT 237
Query: 438 HHVSRAIEKGTLAEMLDPAVTDW----PAEAAESFSKLAIQCAELRKKDRPDLGTVIVPE 493
+ T AE+ + + P + L QC + +RP ++V
Sbjct: 238 PYCGM-----TCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV-- 290
Query: 494 LNRLKDLGRKLESNKSY 510
L R LE K+Y
Sbjct: 291 -----SLNRMLEERKTY 302
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 142/317 (44%), Gaps = 48/317 (15%)
Query: 219 YTIEEIEEATDKFSEAMK---------IGEGGYGPVYRGKLD-----HTPVAIKVLRPDA 264
+T E+ +A +F++ + IG G +G V G+L VAIK L+
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 265 A-QGKRQFQQEVEVLSSIRHPNMVLLLGACPDYGC----LVYEYMHNGSLEDRLLRR--G 317
+ +R F E ++ HPN++ L G C ++ EYM NGSL D LR+ G
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTK--CKPVMIITEYMENGSL-DAFLRKNDG 126
Query: 318 NTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARL 377
VI + + I + + +L VHRDL NIL++ N V K+SD G++R+
Sbjct: 127 RFTVI---QLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRV 180
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT--ARSPMG 435
+ D Y + PE T+ SD++S+GI++ ++++ R
Sbjct: 181 LE---DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWD 237
Query: 436 LTHH-VSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPEL 494
+++ V +AIE+G L P P + + +L + C + + DRP G ++
Sbjct: 238 MSNQDVIKAIEEGY---RLPP-----PMDCPIALHQLMLDCWQKERSDRPKFGQIV---- 285
Query: 495 NRLKDLGRKLESNKSYG 511
N L L R S K G
Sbjct: 286 NMLDKLIRNPNSLKRTG 302
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 126/260 (48%), Gaps = 33/260 (12%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGA-CPD 295
IG+G +G V G VA+K ++ DA + F E V++ +RH N+V LLG +
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEE 258
Query: 296 YGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRD 353
G L V EYM GSL D L RG + V+ K + ++ A+ +L VHRD
Sbjct: 259 KGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 314
Query: 354 LKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTT 413
L N+L+ + V+K+SD GL + S TQ + + PE + +T
Sbjct: 315 LAARNVLVSEDNVAKVSDFGLTK------EASSTQ---DTGKLPVKWTAPEALREKKFST 365
Query: 414 KSDIYSFGIMLLQIIT-ARSP---MGLTHHVSRAIEKGTLAEMLD---PAVTD-----WP 461
KSD++SFGI+L +I + R P + L V R +EKG + D PAV D W
Sbjct: 366 KSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMDAPDGCPPAVYDVMKNCWH 424
Query: 462 AEAAE--SFSKLAIQCAELR 479
+AA +F +L Q +R
Sbjct: 425 LDAATRPTFLQLREQLEHIR 444
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 39/294 (13%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLD-------HTPVAIKVLRPDAAQGKR-Q 270
Y +E E A +K + + ++G+G +G VY G T VAIK + A+ +R +
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 67
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDY--GCLVYEYMHNGSLEDRL--LR--RGNTPVI-- 322
F E V+ ++V LLG ++ E M G L+ L LR N PV+
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 323 -PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
K ++A EIA + +L+ K VHRDL N ++ ++ KI D G+ R +
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI--- 181
Query: 382 VADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLT 437
T Y+ G ++ PE + G+ TT SD++SFG++L +I T A P GL+
Sbjct: 182 ---YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 238
Query: 438 H-HVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ V R + +G L D P + +L C + K RP +I
Sbjct: 239 NEQVLRFVMEGGL--------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 39/294 (13%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLD-------HTPVAIKVLRPDAAQGKR-Q 270
Y +E E A +K + + ++G+G +G VY G T VAIK + A+ +R +
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 74
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDY--GCLVYEYMHNGSLEDRL--LR--RGNTPVI-- 322
F E V+ ++V LLG ++ E M G L+ L LR N PV+
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 134
Query: 323 -PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
K ++A EIA + +L+ K VHRDL N ++ ++ KI D G+ R +
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI--- 188
Query: 382 VADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLT 437
T Y+ G ++ PE + G+ TT SD++SFG++L +I T A P GL+
Sbjct: 189 ---YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
Query: 438 H-HVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ V R + +G L D P + +L C + K RP +I
Sbjct: 246 NEQVLRFVMEGGL--------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 291
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 135/278 (48%), Gaps = 25/278 (8%)
Query: 217 RKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAA--QGKRQFQQE 274
R+ + ++ E + + +IG G +G VY+GK H VA+K+L A Q + F+ E
Sbjct: 23 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNE 81
Query: 275 VEVLSSIRHPNMVLLLG-ACPDYGCLVYEYMHNGSLEDRL-LRRGNTPVIPWRKRFKIAA 332
V VL RH N++L +G + +V ++ SL L + +I K IA
Sbjct: 82 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIAR 138
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+ A + +LH + ++HRDLK NI L + KI D GLA + S Q+
Sbjct: 139 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQL 193
Query: 393 SAAGTFCYIDPEY---QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHH---VSRAIEK 446
S G+ ++ PE Q + +SD+Y+FGI+L +++T + P ++ + + +
Sbjct: 194 S--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 251
Query: 447 GTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRP 484
G L+ L ++ P ++ +L +C + ++ +RP
Sbjct: 252 GYLSPDLSKVRSNCP----KAMKRLMAECLKKKRDERP 285
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 135/278 (48%), Gaps = 25/278 (8%)
Query: 217 RKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAA--QGKRQFQQE 274
R+ + ++ E + + +IG G +G VY+GK H VA+K+L A Q + F+ E
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNE 82
Query: 275 VEVLSSIRHPNMVLLLG-ACPDYGCLVYEYMHNGSLEDRL-LRRGNTPVIPWRKRFKIAA 332
V VL RH N++L +G + +V ++ SL L + +I K IA
Sbjct: 83 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIAR 139
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+ A + +LH + ++HRDLK NI L + KI D GLA + S Q+
Sbjct: 140 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQL 194
Query: 393 SAAGTFCYIDPEY---QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHH---VSRAIEK 446
S G+ ++ PE Q + +SD+Y+FGI+L +++T + P ++ + + +
Sbjct: 195 S--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 252
Query: 447 GTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRP 484
G L+ L ++ P ++ +L +C + ++ +RP
Sbjct: 253 GYLSPDLSKVRSNCP----KAMKRLMAECLKKKRDERP 286
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 139/305 (45%), Gaps = 41/305 (13%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRGKLD-----HTPVAIKVLRPDAA-QGKRQFQQEV 275
+EI+ + K + + +GE +G V G+L VAIK L+ + +R F E
Sbjct: 9 KEIDASCIKIEKVIGVGE--FGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 66
Query: 276 EVLSSIRHPNMVLLLGACPDYGC----LVYEYMHNGSLEDRLLRR--GNTPVIPWRKRFK 329
++ HPN++ L G C ++ EYM NGSL D LR+ G VI +
Sbjct: 67 SIMGQFDHPNIIHLEGVVTK--CKPVMIITEYMENGSL-DAFLRKNDGRFTVI---QLVG 120
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQY 389
+ I + + +L VHRDL NIL++ N V K+SD G++R++ D Y
Sbjct: 121 MLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLED---DPEAAY 174
Query: 390 HMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEK 446
+ PE T+ SD++S+GI++ ++++ R +++ V +AIE+
Sbjct: 175 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE 234
Query: 447 GTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKDLGRKLES 506
G L P P + + +L + C + + DRP G ++ N L L R S
Sbjct: 235 GY---RLPP-----PMDCPIALHQLMLDCWQKERSDRPKFGQIV----NMLDKLIRNPNS 282
Query: 507 NKSYG 511
K G
Sbjct: 283 LKRTG 287
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 39/294 (13%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLD-------HTPVAIKVLRPDAAQGKR-Q 270
Y +E E A +K + + ++G+G +G VY G T VAIK + A+ +R +
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDY--GCLVYEYMHNGSLEDRL--LR--RGNTPVI-- 322
F E V+ ++V LLG ++ E M G L+ L LR N PV+
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 323 -PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
K ++A EIA + +L+ K VHRDL N ++ ++ KI D G+ R +
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI--- 182
Query: 382 VADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLT 437
T Y+ G ++ PE + G+ TT SD++SFG++L +I T A P GL+
Sbjct: 183 ---YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 239
Query: 438 H-HVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ V R + +G L D P + +L C + K RP +I
Sbjct: 240 NEQVLRFVMEGGL--------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 135/297 (45%), Gaps = 44/297 (14%)
Query: 219 YTIEEIEEATDKFSEAMKI---------GEGGYGPVYRGKLD-----HTPVAIKVLRPDA 264
+T E+ EA +F++ + I G G +G V G L VAIK L+
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 265 AQGKRQ-FQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRR--GNT 319
+ +R+ F E ++ HPN++ L G ++ E+M NGSL D LR+ G
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQF 132
Query: 320 PVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVP 379
VI + + IA + +L VHRDL NIL++ N V K+SD GL+R +
Sbjct: 133 TVI---QLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLE 186
Query: 380 PSVADSVTQYHMTSAAG---TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT--ARSPM 434
+D TSA G + PE Q T+ SD++S+GI++ ++++ R
Sbjct: 187 DDTSDPT----YTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYW 242
Query: 435 GLTHH-VSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+T+ V AIE+ L P P + + +L + C + + RP G ++
Sbjct: 243 DMTNQDVINAIEQDY---RLPP-----PMDCPSALHQLMLDCWQKDRNHRPKFGQIV 291
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 134/278 (48%), Gaps = 25/278 (8%)
Query: 217 RKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAA--QGKRQFQQE 274
R+ + ++ E + + +IG G +G VY+GK H VA+K+L A Q + F+ E
Sbjct: 24 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNE 82
Query: 275 VEVLSSIRHPNMVLLLG-ACPDYGCLVYEYMHNGSLEDRL-LRRGNTPVIPWRKRFKIAA 332
V VL RH N++L +G + +V ++ SL L + +I K IA
Sbjct: 83 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIAR 139
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+ A + +LH + ++HRDLK NI L + KI D GLA S Q+
Sbjct: 140 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA--TEKSRWSGSHQFEQL 194
Query: 393 SAAGTFCYIDPEY---QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHH---VSRAIEK 446
S G+ ++ PE Q + +SD+Y+FGI+L +++T + P ++ + + +
Sbjct: 195 S--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 252
Query: 447 GTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRP 484
G L+ L ++ P ++ +L +C + ++ +RP
Sbjct: 253 GYLSPDLSKVRSNCP----KAMKRLMAECLKKKRDERP 286
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 39/294 (13%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLD-------HTPVAIKVLRPDAAQGKR-Q 270
Y +E E A +K + + ++G+G +G VY G T VAIK + A+ +R +
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 67
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDY--GCLVYEYMHNGSLEDRL--LR--RGNTPVI-- 322
F E V+ ++V LLG ++ E M G L+ L LR N PV+
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 323 -PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
K ++A EIA + +L+ K VHRDL N ++ ++ KI D G+ R +
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI--- 181
Query: 382 VADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLT 437
T Y+ G ++ PE + G+ TT SD++SFG++L +I T A P GL+
Sbjct: 182 ---YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 238
Query: 438 H-HVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ V R + +G L D P + +L C + K RP +I
Sbjct: 239 NEQVLRFVMEGGL--------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 284
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 139/305 (45%), Gaps = 41/305 (13%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRGKLD-----HTPVAIKVLRPDAA-QGKRQFQQEV 275
+EI+ + K + + +GE +G V G+L VAIK L+ + +R F E
Sbjct: 3 KEIDASCIKIEKVIGVGE--FGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 60
Query: 276 EVLSSIRHPNMVLLLGACPDYGC----LVYEYMHNGSLEDRLLRR--GNTPVIPWRKRFK 329
++ HPN++ L G C ++ EYM NGSL D LR+ G VI +
Sbjct: 61 SIMGQFDHPNIIHLEGVVTK--CKPVMIITEYMENGSL-DAFLRKNDGRFTVI---QLVG 114
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQY 389
+ I + + +L VHRDL NIL++ N V K+SD G++R++ D Y
Sbjct: 115 MLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLED---DPEAAY 168
Query: 390 HMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEK 446
+ PE T+ SD++S+GI++ ++++ R +++ V +AIE+
Sbjct: 169 TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEE 228
Query: 447 GTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKDLGRKLES 506
G L P P + + +L + C + + DRP G ++ N L L R S
Sbjct: 229 GY---RLPP-----PMDCPIALHQLMLDCWQKERSDRPKFGQIV----NMLDKLIRNPNS 276
Query: 507 NKSYG 511
K G
Sbjct: 277 LKRTG 281
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 29/216 (13%)
Query: 236 KIGEGGYGPVYRGKL-------DHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
++GEG +G V+ + D VA+K L+ ++ FQ+E E+L++++H ++V
Sbjct: 22 ELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVK 81
Query: 289 LLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVI-------------PWRKRFKIAAE 333
G C D +V+EYM +G L L G +I + IA++
Sbjct: 82 FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQ 141
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
IA+ +++L + VHRDL N L+ N + KI D G++R V + V + M
Sbjct: 142 IASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLP 198
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
++ PE TT+SD++SFG++L +I T
Sbjct: 199 IR----WMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 116/248 (46%), Gaps = 21/248 (8%)
Query: 224 IEEATDKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVLRPDA---AQGKRQFQQEVEVL 278
I E + F +G+G + VYR + HT VAIK++ A A ++ Q EV++
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 279 SSIRHPNMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIAT 336
++HP+++ L D Y LV E HNG + +R L+ P R +I T
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLEMCHNGEM-NRYLKNRVKPFSENEAR-HFMHQIIT 123
Query: 337 ALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLA-RLVPPSVADSVTQYHMTSAA 395
+L+LH ++HRDL +N+LL RN KI+D GLA +L P + H T
Sbjct: 124 GMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH------EKHYT-LC 173
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDP 455
GT YI PE +SD++S G M ++ R P T V + K LA+ P
Sbjct: 174 GTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFD-TDTVKNTLNKVVLADYEMP 232
Query: 456 AVTDWPAE 463
+ A+
Sbjct: 233 SFLSIEAK 240
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 134/278 (48%), Gaps = 25/278 (8%)
Query: 217 RKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAA--QGKRQFQQE 274
R+ + ++ E + + +IG G +G VY+GK H VA+K+L A Q + F+ E
Sbjct: 16 RRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNE 74
Query: 275 VEVLSSIRHPNMVLLLG-ACPDYGCLVYEYMHNGSLEDRL-LRRGNTPVIPWRKRFKIAA 332
V VL RH N++L +G + +V ++ SL L + +I K IA
Sbjct: 75 VGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIAR 131
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+ A + +LH + ++HRDLK NI L + KI D GLA S Q+
Sbjct: 132 QTAQGMDYLH---AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA--TEKSRWSGSHQFEQL 186
Query: 393 SAAGTFCYIDPEY---QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHH---VSRAIEK 446
S G+ ++ PE Q + +SD+Y+FGI+L +++T + P ++ + + +
Sbjct: 187 S--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 244
Query: 447 GTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRP 484
G L+ L ++ P ++ +L +C + ++ +RP
Sbjct: 245 GYLSPDLSKVRSNCP----KAMKRLMAECLKKKRDERP 278
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 133/294 (45%), Gaps = 39/294 (13%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLD-------HTPVAIKVLRPDAAQGKR-Q 270
Y +E E A +K + + ++G+G +G VY G T VAIK + A+ +R +
Sbjct: 37 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 96
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDY--GCLVYEYMHNGSLEDRL--LR--RGNTPVI-- 322
F E V+ ++V LLG ++ E M G L+ L LR N PV+
Sbjct: 97 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 156
Query: 323 -PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
K ++A EIA + +L+ K VHRDL N ++ ++ KI D G+ R +
Sbjct: 157 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE- 212
Query: 382 VADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLT 437
T Y+ G ++ PE + G+ TT SD++SFG++L +I T A P GL+
Sbjct: 213 -----TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 267
Query: 438 H-HVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ V R + +G L D P + +L C + K RP +I
Sbjct: 268 NEQVLRFVMEGGL--------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 313
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 35 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + FL
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL 150
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + DSV ++ T A ++
Sbjct: 151 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSV--HNKTGAKLPVKWM 205
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 23/202 (11%)
Query: 236 KIGEGGYGPVYRGKLDH-TPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC- 293
K+G G +G V+ G ++ T VA+K L+P + F +E ++ +++H +V L
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKP-GTMSVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 294 ---PDYGCLVYEYMHNGSLEDRLLR-RGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P Y ++ E+M GSL D L G ++P K +A+IA + ++ +
Sbjct: 78 KEEPIY--IITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN---Y 130
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPS--VADSVTQYHMTSAAGTFCYIDPEYQQ 407
+HRDL+ AN+L+ + + KI+D GLAR++ + A ++ + A PE
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTA-------PEAIN 183
Query: 408 TGMLTTKSDIYSFGIMLLQIIT 429
G T KS+++SFGI+L +I+T
Sbjct: 184 FGCFTIKSNVWSFGILLYEIVT 205
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 101/201 (50%), Gaps = 19/201 (9%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGA-CPD 295
IG+G +G V G VA+K ++ DA + F E V++ +RH N+V LLG +
Sbjct: 20 IGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEE 77
Query: 296 YGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRD 353
G L V EYM GSL D L RG + V+ K + ++ A+ +L VHRD
Sbjct: 78 KGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYLEGNN---FVHRD 133
Query: 354 LKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTT 413
L N+L+ + V+K+SD GL + S TQ + + PE + +T
Sbjct: 134 LAARNVLVSEDNVAKVSDFGLTK------EASSTQ---DTGKLPVKWTAPEALREAAFST 184
Query: 414 KSDIYSFGIMLLQIIT-ARSP 433
KSD++SFGI+L +I + R P
Sbjct: 185 KSDVWSFGILLWEIYSFGRVP 205
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 35 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 92
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + FL
Sbjct: 93 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL 150
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + DSV ++ T A ++
Sbjct: 151 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV--HNKTGAKLPVKWM 205
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 206 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 34 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + FL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL 149
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + DSV ++ T A ++
Sbjct: 150 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV--HNKTGAKLPVKWM 204
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 32 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + FL
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL 147
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + DSV ++ T A ++
Sbjct: 148 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV--HNKTGAKLPVKWM 202
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 93 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 150
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + FL
Sbjct: 151 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL 208
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + DSV ++ T A ++
Sbjct: 209 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV--HNKTGAKLPVKWM 263
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 264 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 34 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + FL
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL 149
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + DSV ++ T A ++
Sbjct: 150 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV--HNKTGAKLPVKWM 204
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 102/201 (50%), Gaps = 19/201 (9%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGA-CPD 295
IG+G +G V G VA+K ++ DA + F E V++ +RH N+V LLG +
Sbjct: 29 IGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEE 86
Query: 296 YGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRD 353
G L V EYM GSL D L RG + V+ K + ++ A+ +L + VHRD
Sbjct: 87 KGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYL---EGNNFVHRD 142
Query: 354 LKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTT 413
L N+L+ + V+K+SD GL + S TQ + + PE + +T
Sbjct: 143 LAARNVLVSEDNVAKVSDFGLTK------EASSTQ---DTGKLPVKWTAPEALREKKFST 193
Query: 414 KSDIYSFGIMLLQIIT-ARSP 433
KSD++SFGI+L +I + R P
Sbjct: 194 KSDVWSFGILLWEIYSFGRVP 214
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 133/294 (45%), Gaps = 39/294 (13%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLD-------HTPVAIKVLRPDAAQGKR-Q 270
+ +E E A +K + + ++G+G +G VY G T VAIK + A+ +R +
Sbjct: 6 FVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 65
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDY--GCLVYEYMHNGSLEDRL--LR--RGNTPVI-- 322
F E V+ ++V LLG ++ E M G L+ L LR N PV+
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 323 -PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
K ++A EIA + +L+ K VHRDL N ++ ++ KI D G+ R +
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI--- 179
Query: 382 VADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLT 437
T Y+ G ++ PE + G+ TT SD++SFG++L +I T A P GL+
Sbjct: 180 ---YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 236
Query: 438 H-HVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ V R + +G L D P + +L C + K RP +I
Sbjct: 237 NEQVLRFVMEGGL--------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 282
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 129/266 (48%), Gaps = 27/266 (10%)
Query: 230 KFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+ + +IG G +G VY+GK H VA+K+L A Q + F+ EV VL RH N++
Sbjct: 9 QITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 288 LLLG--ACPDYGCLVYEYMHNGSLEDRL-LRRGNTPVIPWRKRFKIAAEIATALLFLHQA 344
L +G P +V ++ SL L + +I K IA + A + +LH
Sbjct: 68 LFMGYSTAPQL-AIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH-- 121
Query: 345 KPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPE 404
+ ++HRDLK NI L + KI D GLA + S Q+ S G+ ++ PE
Sbjct: 122 -AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLS--GSILWMAPE 176
Query: 405 Y---QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHH---VSRAIEKGTLAEMLDPAVT 458
Q + +SD+Y+FGI+L +++T + P ++ + + +G L+ L +
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRS 236
Query: 459 DWPAEAAESFSKLAIQCAELRKKDRP 484
+ P ++ +L +C + ++ +RP
Sbjct: 237 NCP----KAMKRLMAECLKKKRDERP 258
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 102/212 (48%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 39 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 96
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + FL
Sbjct: 97 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKFL 154
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + DSV ++ T A ++
Sbjct: 155 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV--HNKTGAKLPVKWM 209
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 210 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 25/265 (9%)
Query: 230 KFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+ + +IG G +G VY+GK H VA+K+L A Q + F+ EV VL RH N++
Sbjct: 14 QITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 288 LLLG-ACPDYGCLVYEYMHNGSLEDRL-LRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L +G + +V ++ SL L + +I K IA + A + +LH
Sbjct: 73 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH--- 126
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ ++HRDLK NI L + KI D GLA + S Q+ S G+ ++ PE
Sbjct: 127 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLS--GSILWMAPEV 182
Query: 406 ---QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHH---VSRAIEKGTLAEMLDPAVTD 459
Q + +SD+Y+FGI+L +++T + P ++ + + +G L+ L ++
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 242
Query: 460 WPAEAAESFSKLAIQCAELRKKDRP 484
P ++ +L +C + ++ +RP
Sbjct: 243 CP----KAMKRLMAECLKKKRDERP 263
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 25/265 (9%)
Query: 230 KFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+ + +IG G +G VY+GK H VA+K+L A Q + F+ EV VL RH N++
Sbjct: 14 QITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 72
Query: 288 LLLG-ACPDYGCLVYEYMHNGSLEDRL-LRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L +G + +V ++ SL L + +I K IA + A + +LH
Sbjct: 73 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH--- 126
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ ++HRDLK NI L + KI D GLA + S Q+ S G+ ++ PE
Sbjct: 127 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLS--GSILWMAPEV 182
Query: 406 ---QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHH---VSRAIEKGTLAEMLDPAVTD 459
Q + +SD+Y+FGI+L +++T + P ++ + + +G L+ L ++
Sbjct: 183 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 242
Query: 460 WPAEAAESFSKLAIQCAELRKKDRP 484
P ++ +L +C + ++ +RP
Sbjct: 243 CP----KAMKRLMAECLKKKRDERP 263
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 102/201 (50%), Gaps = 19/201 (9%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGA-CPD 295
IG+G +G V G VA+K ++ DA + F E V++ +RH N+V LLG +
Sbjct: 14 IGKGEFGDVMLGDYRGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEE 71
Query: 296 YGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRD 353
G L V EYM GSL D L RG + V+ K + ++ A+ +L + VHRD
Sbjct: 72 KGGLYIVTEYMAKGSLVDYLRSRGRS-VLGGDCLLKFSLDVCEAMEYL---EGNNFVHRD 127
Query: 354 LKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTT 413
L N+L+ + V+K+SD GL + S TQ + + PE + +T
Sbjct: 128 LAARNVLVSEDNVAKVSDFGLTK------EASSTQ---DTGKLPVKWTAPEALREKKFST 178
Query: 414 KSDIYSFGIMLLQIIT-ARSP 433
KSD++SFGI+L +I + R P
Sbjct: 179 KSDVWSFGILLWEIYSFGRVP 199
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 25/265 (9%)
Query: 230 KFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+ + +IG G +G VY+GK H VA+K+L A Q + F+ EV VL RH N++
Sbjct: 11 QITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 69
Query: 288 LLLG-ACPDYGCLVYEYMHNGSLEDRL-LRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L +G + +V ++ SL L + +I K IA + A + +LH
Sbjct: 70 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH--- 123
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ ++HRDLK NI L + KI D GLA + S Q+ S G+ ++ PE
Sbjct: 124 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLS--GSILWMAPEV 179
Query: 406 ---QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHH---VSRAIEKGTLAEMLDPAVTD 459
Q + +SD+Y+FGI+L +++T + P ++ + + +G L+ L ++
Sbjct: 180 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 239
Query: 460 WPAEAAESFSKLAIQCAELRKKDRP 484
P ++ +L +C + ++ +RP
Sbjct: 240 CP----KAMKRLMAECLKKKRDERP 260
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 132/291 (45%), Gaps = 39/291 (13%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRGKLD-------HTPVAIKVLRPDAAQGKR-QFQQ 273
+E E A +K + + ++G+G +G VY G T VAIK + A+ +R +F
Sbjct: 5 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 64
Query: 274 EVEVLSSIRHPNMVLLLGACPDY--GCLVYEYMHNGSLEDRL--LR--RGNTPVI---PW 324
E V+ ++V LLG ++ E M G L+ L LR N PV+
Sbjct: 65 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 124
Query: 325 RKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
K ++A EIA + +L+ K VHRDL N ++ ++ KI D G+ R +
Sbjct: 125 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTRDI------ 175
Query: 385 SVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLTH-H 439
T Y+ G ++ PE + G+ TT SD++SFG++L +I T A P GL++
Sbjct: 176 YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ 235
Query: 440 VSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
V R + +G L D P + +L C + K RP +I
Sbjct: 236 VLRFVMEGGL--------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 278
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 111/232 (47%), Gaps = 37/232 (15%)
Query: 227 ATDKFSEAMK---------IGEGGYGPVYRGKL-------DHTPVAIKVLRPDAAQGKRQ 270
A D F + +K +GEG +G V+ + D VA+K L+ + ++
Sbjct: 2 AMDTFVQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKD 61
Query: 271 FQQEVEVLSSIRHPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLR----------RGN 318
F +E E+L++++H ++V G C D +V+EYM +G L ++ LR GN
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDL-NKFLRAHGPDAVLMAEGN 120
Query: 319 TPV-IPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARL 377
P + + IA +IA +++L + VHRDL N L+ N + KI D G++R
Sbjct: 121 PPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRD 177
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
V + V + M ++ PE TT+SD++S G++L +I T
Sbjct: 178 VYSTDYYRVGGHTMLPIR----WMPPESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 129/265 (48%), Gaps = 25/265 (9%)
Query: 230 KFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+ + +IG G +G VY+GK H VA+K+L A Q + F+ EV VL RH N++
Sbjct: 9 QITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 288 LLLG-ACPDYGCLVYEYMHNGSLEDRL-LRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L +G + +V ++ SL L + +I K IA + A + +LH
Sbjct: 68 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH--- 121
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ ++HRDLK NI L + KI D GLA + S Q+ S G+ ++ PE
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLS--GSILWMAPEV 177
Query: 406 ---QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHH---VSRAIEKGTLAEMLDPAVTD 459
Q + +SD+Y+FGI+L +++T + P ++ + + +G L+ L ++
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 460 WPAEAAESFSKLAIQCAELRKKDRP 484
P ++ +L +C + ++ +RP
Sbjct: 238 CP----KAMKRLMAECLKKKRDERP 258
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 132/294 (44%), Gaps = 39/294 (13%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLD-------HTPVAIKVLRPDAAQGKR-Q 270
Y +E E A +K + + ++G+G +G VY G T VAIK + A+ +R +
Sbjct: 2 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 61
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDY--GCLVYEYMHNGSLEDRL--LR--RGNTPVI-- 322
F E V+ ++V LLG ++ E M G L+ L LR N PV+
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 323 -PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
K ++A EIA + +L+ K VHRDL N + ++ KI D G+ R +
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCXVAEDFTVKIGDFGMTRDI--- 175
Query: 382 VADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLT 437
T Y+ G ++ PE + G+ TT SD++SFG++L +I T A P GL+
Sbjct: 176 ---YETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 232
Query: 438 H-HVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ V R + +G L D P + +L C + K RP +I
Sbjct: 233 NEQVLRFVMEGGL--------LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 278
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 40/294 (13%)
Query: 219 YTIEEIEEATDKFSEAMK---------IGEGGYGPVYRGKLD-----HTPVAIKVLRPDA 264
+T E+ +A +F++ ++ IG G +G V G+L PVAIK L+
Sbjct: 3 HTYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGY 62
Query: 265 AQGKRQ-FQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRR--GNT 319
+ +R+ F E ++ HPN++ L G +V EYM NGSL D L++ G
Sbjct: 63 TEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQF 121
Query: 320 PVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVP 379
VI + + I+ + +L VHRDL NIL++ N V K+SD GL+R++
Sbjct: 122 TVI---QLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLE 175
Query: 380 PSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLT 437
D Y + PE T+ SD++S+GI++ ++++ R +T
Sbjct: 176 ---DDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMT 232
Query: 438 HH-VSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ V +A+E+G P+ D PA + +L + C + + RP ++
Sbjct: 233 NQDVIKAVEEGYRL----PSPMDCPA----ALYQLMLDCWQKERNSRPKFDEIV 278
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 128/265 (48%), Gaps = 25/265 (9%)
Query: 230 KFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+ + +IG G +G VY+GK H VA+K+L A Q + F+ EV VL RH N++
Sbjct: 9 QITVGQRIGSGSFGTVYKGKW-HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL 67
Query: 288 LLLG-ACPDYGCLVYEYMHNGSLEDRL-LRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L +G + +V ++ SL L + +I K IA + A + +LH
Sbjct: 68 LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMI---KLIDIARQTAQGMDYLH--- 121
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ ++HRDLK NI L + KI D GLA S Q+ S G+ ++ PE
Sbjct: 122 AKSIIHRDLKSNNIFLHEDLTVKIGDFGLA--TEKSRWSGSHQFEQLS--GSILWMAPEV 177
Query: 406 ---QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHH---VSRAIEKGTLAEMLDPAVTD 459
Q + +SD+Y+FGI+L +++T + P ++ + + +G L+ L ++
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 460 WPAEAAESFSKLAIQCAELRKKDRP 484
P ++ +L +C + ++ +RP
Sbjct: 238 CP----KAMKRLMAECLKKKRDERP 258
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 125/267 (46%), Gaps = 31/267 (11%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLLL 290
IG G +G V G+L VAIK L+ + +R+ F E ++ HPN+V L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 291 GACPDYG--CLVYEYMHNGSLEDRLLRR--GNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V E+M NG+L D LR+ G VI + + IA + +L
Sbjct: 111 GVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVI---QLVGMLRGIAAGMRYLADMG- 165
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
VHRDL NIL++ N V K+SD GL+R++ D Y T + PE
Sbjct: 166 --YVHRDLAARNILVNSNLVCKVSDFGLSRVIED---DPEAVYTTTGGKIPVRWTAPEAI 220
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPAE 463
Q T+ SD++S+GI++ ++++ R +++ V +AIE+G PA D PA
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRL----PAPMDCPA- 275
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTVI 490
+L + C + + +RP ++
Sbjct: 276 ---GLHQLMLDCWQKERAERPKFEQIV 299
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 137/302 (45%), Gaps = 41/302 (13%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKL-------DHTPVAIKVLRPDAAQGKR-Q 270
+ +E E + +K + ++G+G +G VY G T VA+K + A+ +R +
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 271 FQQEVEVLSSIRHPNMVLLLGACP--DYGCLVYEYMHNGSLEDRL--LR--RGNTPVIP- 323
F E V+ ++V LLG +V E M +G L+ L LR N P P
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 324 --WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
++ ++AAEIA + +L+ K VHRDL N ++ ++ KI D G+ R +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI--- 180
Query: 382 VADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLT 437
T Y+ G ++ PE + G+ TT SD++SFG++L +I + A P GL+
Sbjct: 181 ---YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
Query: 438 HHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRL 497
+ + L ++D D P E + L C + K RP ++ N L
Sbjct: 238 N-------EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV----NLL 286
Query: 498 KD 499
KD
Sbjct: 287 KD 288
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 137/302 (45%), Gaps = 41/302 (13%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKL-------DHTPVAIKVLRPDAAQGKR-Q 270
+ +E E + +K + ++G+G +G VY G T VA+K + A+ +R +
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 271 FQQEVEVLSSIRHPNMVLLLGACP--DYGCLVYEYMHNGSLEDRL--LR--RGNTPVIP- 323
F E V+ ++V LLG +V E M +G L+ L LR N P P
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 324 --WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
++ ++AAEIA + +L+ K VHRDL N ++ ++ KI D G+ R +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI--- 180
Query: 382 VADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLT 437
T Y+ G ++ PE + G+ TT SD++SFG++L +I + A P GL+
Sbjct: 181 ---YETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
Query: 438 HHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRL 497
+ + L ++D D P E + L C + K RP ++ N L
Sbjct: 238 N-------EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV----NLL 286
Query: 498 KD 499
KD
Sbjct: 287 KD 288
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 134/283 (47%), Gaps = 33/283 (11%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQ-GKRQFQQEV 275
+EI+ + K E IG G +G V RG+L + VAIK L+ + +R+F E
Sbjct: 9 KEIDVSYVKIEEV--IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEA 66
Query: 276 EVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRL-LRRGNTPVIPWRKRFKIAA 332
++ HPN++ L G + ++ E+M NG+L+ L L G VI + +
Sbjct: 67 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLR 123
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
IA+ + +L + VHRDL NIL++ N V K+SD GL+R + + +D + +
Sbjct: 124 GIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT---YTS 177
Query: 393 SAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKG 447
S G + PE T+ SD +S+GI++ ++++ R +++ V AIE+
Sbjct: 178 SLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQD 237
Query: 448 TLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
L P P + S +L + C + + RP V+
Sbjct: 238 Y---RLPP-----PPDCPTSLHQLMLDCWQKDRNARPRFPQVV 272
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 131/292 (44%), Gaps = 35/292 (11%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLD-------HTPVAIKVLRPDAAQGKR-Q 270
Y +E E A +K + + ++G+G +G VY G T VAIK + A+ +R +
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDY--GCLVYEYMHNGSLEDRL--LR--RGNTPVI-- 322
F E V+ ++V LLG ++ E M G L+ L LR N PV+
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 323 -PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
K ++A EIA + +L+ K VHRDL N ++ ++ KI D G+ R
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR----D 181
Query: 382 VADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLTH- 438
+ ++ ++ PE + G+ TT SD++SFG++L +I T A P GL++
Sbjct: 182 IXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE 241
Query: 439 HVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
V R + +G L D P + +L C + K RP +I
Sbjct: 242 QVLRFVMEGGL--------LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEII 285
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 132/290 (45%), Gaps = 43/290 (14%)
Query: 232 SEAM---KIGEGGYGPVYRGKLDHTPVAIKVLR-----PDAAQGKRQFQQEVEVLSSIRH 283
SE M +IG G +G VY+GK H VA+K+L+ P+ Q F+ EV VL RH
Sbjct: 36 SEVMLSTRIGSGSFGTVYKGKW-HGDVAVKILKVVDPTPEQFQA---FRNEVAVLRKTRH 91
Query: 284 PNMVLLLG-ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH 342
N++L +G D +V ++ SL L + + IA + A + +LH
Sbjct: 92 VNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETK--FQMFQLIDIARQTAQGMDYLH 149
Query: 343 QAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPP-SVADSVTQYHMTSAAGTFCYI 401
+ ++HRD+K NI L KI D GLA + S + V Q G+ ++
Sbjct: 150 ---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQ-----PTGSVLWM 201
Query: 402 DPEY---QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHH---VSRAIEKGTLAEMLDP 455
PE Q + +SD+YS+GI+L +++T P ++ + + +G + L
Sbjct: 202 APEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSK 261
Query: 456 AVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI---------VPELNR 496
+ P ++ +L C + K++RP ++ +P++NR
Sbjct: 262 LYKNCP----KAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPKINR 307
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 33 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + +L
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL 148
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + SV ++ T A ++
Sbjct: 149 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSV--HNKTGAKLPVKWM 203
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 132/281 (46%), Gaps = 29/281 (10%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQ-GKRQFQQEV 275
+EI+ + K E IG G +G V RG+L + VAIK L+ + +R+F E
Sbjct: 11 KEIDVSYVKIEEV--IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEA 68
Query: 276 EVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRL-LRRGNTPVIPWRKRFKIAA 332
++ HPN++ L G + ++ E+M NG+L+ L L G VI + +
Sbjct: 69 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVI---QLVGMLR 125
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
IA+ + +L + VHRDL NIL++ N V K+SD GL+R + + +D T+
Sbjct: 126 GIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDP-TETSSL 181
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTL 449
+ PE T+ SD +S+GI++ ++++ R +++ V AIE+
Sbjct: 182 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDY- 240
Query: 450 AEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
L P P + S +L + C + + RP V+
Sbjct: 241 --RLPP-----PPDCPTSLHQLMLDCWQKDRNARPRFPQVV 274
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 134/296 (45%), Gaps = 41/296 (13%)
Query: 225 EEATDKFSEAMKIGEGGYGPVYRGKLD-------HTPVAIKVLRPDAAQGKR-QFQQEVE 276
E + +K + ++G+G +G VY G T VA+K + A+ +R +F E
Sbjct: 12 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 277 VLSSIRHPNMVLLLGACPDY--GCLVYEYMHNGSLEDRL--LR--RGNTPVIP---WRKR 327
V+ ++V LLG +V E M +G L+ L LR N P P ++
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 131
Query: 328 FKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVT 387
++AAEIA + +L+ K VHRDL N ++ ++ KI D G+ R + T
Sbjct: 132 IQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDI------YET 182
Query: 388 QYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLTHHVSRA 443
Y+ G ++ PE + G+ TT SD++SFG++L +I + A P GL++
Sbjct: 183 DYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN----- 237
Query: 444 IEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKD 499
+ L ++D D P E + L C + K RP ++ N LKD
Sbjct: 238 --EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV----NLLKD 287
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 136/302 (45%), Gaps = 41/302 (13%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKL-------DHTPVAIKVLRPDAAQGKR-Q 270
Y +E E + +K + ++G+G +G VY G T VA+K + A+ +R +
Sbjct: 7 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 271 FQQEVEVLSSIRHPNMVLLLGACP--DYGCLVYEYMHNGSLEDRL--LR--RGNTPVIP- 323
F E V+ ++V LLG +V E M +G L+ L LR N P P
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 324 --WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
++ ++AAEIA + +L+ K VHR+L N ++ ++ KI D G+ R +
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDI--- 180
Query: 382 VADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLT 437
T Y+ G ++ PE + G+ TT SD++SFG++L +I + A P GL+
Sbjct: 181 ---YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 237
Query: 438 HHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRL 497
+ + L ++D D P E + L C + RP ++ N L
Sbjct: 238 N-------EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV----NLL 286
Query: 498 KD 499
KD
Sbjct: 287 KD 288
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 136/302 (45%), Gaps = 41/302 (13%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKL-------DHTPVAIKVLRPDAAQGKR-Q 270
Y +E E + +K + ++G+G +G VY G T VA+K + A+ +R +
Sbjct: 8 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 67
Query: 271 FQQEVEVLSSIRHPNMVLLLGACP--DYGCLVYEYMHNGSLEDRL--LR--RGNTPVIP- 323
F E V+ ++V LLG +V E M +G L+ L LR N P P
Sbjct: 68 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 127
Query: 324 --WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
++ ++AAEIA + +L+ K VHR+L N ++ ++ KI D G+ R +
Sbjct: 128 PTLQEMIQMAAEIADGMAYLNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDI--- 181
Query: 382 VADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLT 437
T Y+ G ++ PE + G+ TT SD++SFG++L +I + A P GL+
Sbjct: 182 ---YETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 238
Query: 438 HHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRL 497
+ + L ++D D P E + L C + RP ++ N L
Sbjct: 239 N-------EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV----NLL 287
Query: 498 KD 499
KD
Sbjct: 288 KD 289
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 126/286 (44%), Gaps = 47/286 (16%)
Query: 237 IGEGGYGPVYR----GKLDHTP---VAIKVLRPDA-AQGKRQFQQEVEVLSSIRHPNMVL 288
IGEG +G V++ G L + P VA+K+L+ +A A + FQ+E +++ +PN+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 289 LLGACP--DYGCLVYEYMHNGSLEDRL---------------------LRRGNTPVIPWR 325
LLG C CL++EYM G L + L + P +
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 326 KRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADS 385
++ IA ++A + +L + K VHRDL N L+ N V KI+D GL+R +
Sbjct: 175 EQLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNI------Y 225
Query: 386 VTQYHMTSA--AGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRA 443
Y+ A ++ PE TT+SD++++G++L +I + GL + A
Sbjct: 226 SADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS----YGLQPYYGMA 281
Query: 444 IEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTV 489
E+ + + D + P L C DRP ++
Sbjct: 282 HEE-VIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSI 326
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAA-QGKRQFQQEVEVLSSIRHPNMVLL 289
+GEG +G V D T VA+K L+ DA Q + ++QE+++L ++ H +++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 290 LGACPDYGC----LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
G C D G LV EY+ GSL D L R I + A +I + +LH
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHA-- 152
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ +HRDL N+LLD + + KI D GLA+ VP + + F Y PE
Sbjct: 153 -QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE--GHEXYRVREDGDSPVFWYA-PEC 208
Query: 406 QQTGMLTTKSDIYSFGIMLLQIIT 429
+ SD++SFG+ L +++T
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLT 232
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 130/289 (44%), Gaps = 35/289 (12%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRGKLD-------HTPVAIKVLRPDAAQGKR-QFQQ 273
+E E A +K + + ++G+G +G VY G T VAIK + A+ +R +F
Sbjct: 3 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLN 62
Query: 274 EVEVLSSIRHPNMVLLLGACPDY--GCLVYEYMHNGSLEDRL--LR--RGNTPVI---PW 324
E V+ ++V LLG ++ E M G L+ L LR N PV+
Sbjct: 63 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL 122
Query: 325 RKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
K ++A EIA + +L+ K VHRDL N ++ ++ KI D G+ R + +
Sbjct: 123 SKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIGDFGMTR----DIXE 175
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLTH-HVS 441
+ ++ PE + G+ TT SD++SFG++L +I T A P GL++ V
Sbjct: 176 TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL 235
Query: 442 RAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
R + +G L D P + +L C + K RP +I
Sbjct: 236 RFVMEGGL--------LDKPDNCPDMLLELMRMCWQYNPKMRPSFLEII 276
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 32 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 89
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + +L
Sbjct: 90 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL 147
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + SV ++ T A ++
Sbjct: 148 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWM 202
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 203 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 34 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + +L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL 149
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + SV ++ T A ++
Sbjct: 150 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWM 204
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 123/270 (45%), Gaps = 35/270 (12%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLLL 290
IG G +G V G L VAIK L+ + +R+ F E ++ HPN++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 291 GACPDYG--CLVYEYMHNGSLEDRLLRR--GNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
G ++ E+M NGSL D LR+ G VI + + IA + +L
Sbjct: 75 GVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVI---QLVGMLRGIAAGMKYLADMN- 129
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT---FCYIDP 403
VHR L NIL++ N V K+SD GL+R + +D TSA G + P
Sbjct: 130 --YVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT----YTSALGGKIPIRWTAP 183
Query: 404 EYQQTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDW 460
E Q T+ SD++S+GI++ ++++ R +T+ V AIE+ L P
Sbjct: 184 EAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDY---RLPP----- 235
Query: 461 PAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
P + + +L + C + + RP G ++
Sbjct: 236 PMDCPSALHQLMLDCWQKDRNHRPKFGQIV 265
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 33 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 90
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + +L
Sbjct: 91 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL 148
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + SV ++ T A ++
Sbjct: 149 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWM 203
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 204 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 34 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 91
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + +L
Sbjct: 92 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL 149
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + SV ++ T A ++
Sbjct: 150 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWM 204
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 205 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 29 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 86
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + +L
Sbjct: 87 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL 144
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + SV ++ T A ++
Sbjct: 145 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWM 199
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 200 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 31 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 88
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + +L
Sbjct: 89 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL 146
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + SV ++ T A ++
Sbjct: 147 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWM 201
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 202 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 26 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 83
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + +L
Sbjct: 84 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL 141
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + SV ++ T A ++
Sbjct: 142 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWM 196
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 197 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 52 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 109
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + +L
Sbjct: 110 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL 167
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + SV ++ T A ++
Sbjct: 168 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWM 222
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 223 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 18/212 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-----DHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHP 284
F+E IG G +G VY G L A+K L G+ QF E ++ HP
Sbjct: 53 FNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHP 110
Query: 285 NMVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
N++ LLG C +V YM +G L + + + P + + ++A + +L
Sbjct: 111 NVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTV--KDLIGFGLQVAKGMKYL 168
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
K VHRDL N +LD + K++D GLAR + SV ++ T A ++
Sbjct: 169 ASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV--HNKTGAKLPVKWM 223
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
E QT TTKSD++SFG++L +++T +P
Sbjct: 224 ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 37/300 (12%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKL-------DHTPVAIKVLRPDAAQGKR-Q 270
+ +E E + +K + ++G+G +G VY G T VA+K + A+ +R +
Sbjct: 4 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 63
Query: 271 FQQEVEVLSSIRHPNMVLLLGACP--DYGCLVYEYMHNGSLEDRL--LR--RGNTPVIP- 323
F E V+ ++V LLG +V E M +G L+ L LR N P P
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 123
Query: 324 --WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
++ ++AAEIA + +L+ K VHRDL N ++ ++ KI D G+ R
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR----D 176
Query: 382 VADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLTHH 439
+ ++ ++ PE + G+ TT SD++SFG++L +I + A P GL++
Sbjct: 177 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN- 235
Query: 440 VSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKD 499
+ L ++D D P E + L C + K RP ++ N LKD
Sbjct: 236 ------EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV----NLLKD 285
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 135/300 (45%), Gaps = 37/300 (12%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKL-------DHTPVAIKVLRPDAAQGKR-Q 270
+ +E E + +K + ++G+G +G VY G T VA+K + A+ +R +
Sbjct: 7 FVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 271 FQQEVEVLSSIRHPNMVLLLGACP--DYGCLVYEYMHNGSLEDRL--LR--RGNTPVIP- 323
F E V+ ++V LLG +V E M +G L+ L LR N P P
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 324 --WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
++ ++AAEIA + +L+ K VHRDL N ++ ++ KI D G+ R
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR----D 179
Query: 382 VADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLTHH 439
+ ++ ++ PE + G+ TT SD++SFG++L +I + A P GL++
Sbjct: 180 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN- 238
Query: 440 VSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKD 499
+ L ++D D P E + L C + K RP ++ N LKD
Sbjct: 239 ------EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV----NLLKD 288
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 236 KIGEGGYGPVYRGKL-------DHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
++GEG +G V+ + D VA+K L+ + ++ FQ+E E+L+ ++H ++V
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 289 LLGACPDYGCL--VYEYMHNGSLEDRLLRR---------GNTPVIP----WRKRFKIAAE 333
G C + L V+EYM +G L +R LR G V P + +A++
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 166
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
+A +++L VHRDL N L+ + V KI D G++R + T Y+
Sbjct: 167 VAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDI------YSTDYYRVG 217
Query: 394 AAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
++ PE TT+SD++SFG++L +I T
Sbjct: 218 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 236 KIGEGGYGPVYRGKL-------DHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
++GEG +G V+ + D VA+K L+ + ++ FQ+E E+L+ ++H ++V
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 289 LLGACPDYG--CLVYEYMHNGSLEDRLLRR---------GNTPVIP----WRKRFKIAAE 333
G C + +V+EYM +G L +R LR G V P + +A++
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 143
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
+A +++L VHRDL N L+ + V KI D G++R + T Y+
Sbjct: 144 VAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDI------YSTDYYRVG 194
Query: 394 AAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
++ PE TT+SD++SFG++L +I T
Sbjct: 195 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 125/272 (45%), Gaps = 40/272 (14%)
Query: 236 KIGEGGYGPVYRGK--LDHTPVAIK---VLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLL 290
KIG G + VYR LD PVA+K + A+ + +E+++L + HPN++
Sbjct: 39 KIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY 98
Query: 291 GACPDYGCL--VYEYMHNGSLEDRLLR--RGNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
+ + L V E G L R+++ + +IP R +K ++ +AL +H +
Sbjct: 99 ASFIEDNELNIVLELADAGDLS-RMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR- 156
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
++HRD+KPAN+ + V K+ D+GL R + T H S GT Y+ PE
Sbjct: 157 --VMHRDIKPANVFITATGVVKLGDLGLGRF----FSSKTTAAH--SLVGTPYYMSPERI 208
Query: 407 QTGMLTTKSDIYSFGIMLLQIITARSP-----MGLTHHVSRAIEKGTLAEMLDPAVTDWP 461
KSDI+S G +L ++ +SP M L + + + IE+ D+P
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-YSLCKKIEQ-----------CDYP 256
Query: 462 AEAAESFS----KLAIQCAELRKKDRPDLGTV 489
++ +S +L C + RPD+ V
Sbjct: 257 PLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 121/256 (47%), Gaps = 22/256 (8%)
Query: 236 KIGEGGYGPVYRGK--LDHTPVAIK-VLRP--DAAQGKRQFQQEVEVLSSIRHPNMVLLL 290
K+G GG VY + + + VAIK + P + + ++F++EV S + H N+V ++
Sbjct: 18 KLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMI 77
Query: 291 GACPDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
+ C LV EY+ +L + + G V +I + H +
Sbjct: 78 DVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSV---DTAINFTNQILDGIKHAHDMR--- 131
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
+VHRD+KP NIL+D N KI D G+A+ + + S+TQ GT Y PE Q
Sbjct: 132 IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET---SLTQ--TNHVLGTVQYFSPE-QAK 185
Query: 409 GMLTTK-SDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAES 467
G T + +DIYS GI+L +++ P VS AI+ + + + TD + +S
Sbjct: 186 GEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKH--IQDSVPNVTTDVRKDIPQS 243
Query: 468 FSKLAIQCAELRKKDR 483
S + ++ E K +R
Sbjct: 244 LSNVILRATEKDKANR 259
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 34/218 (15%)
Query: 236 KIGEGGYGPVYRGKL-------DHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
++GEG +G V+ + D VA+K L+ + ++ FQ+E E+L+ ++H ++V
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 289 LLGACPDYG--CLVYEYMHNGSLEDRLLRR---------GNTPVIP----WRKRFKIAAE 333
G C + +V+EYM +G L +R LR G V P + +A++
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQ 137
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
+A +++L VHRDL N L+ + V KI D G++R + T Y+
Sbjct: 138 VAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDI------YSTDYYRVG 188
Query: 394 AAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
++ PE TT+SD++SFG++L +I T
Sbjct: 189 GRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 134/300 (44%), Gaps = 37/300 (12%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGKL-------DHTPVAIKVLRPDAAQGKR-Q 270
Y +E E + +K + ++G+G +G VY G T VA+K + A+ +R +
Sbjct: 7 YVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIE 66
Query: 271 FQQEVEVLSSIRHPNMVLLLGACP--DYGCLVYEYMHNGSLEDRL--LR--RGNTPVIP- 323
F E V+ ++V LLG +V E M +G L+ L LR N P P
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 324 --WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
++ ++AAEIA + +L+ K VHRDL N ++ ++ KI D G+ R
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR----D 179
Query: 382 VADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-MGLTHH 439
+ ++ ++ PE + G+ TT SD++SFG++L +I + A P GL++
Sbjct: 180 IXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN- 238
Query: 440 VSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKD 499
+ L ++D D P E + L C + RP ++ N LKD
Sbjct: 239 ------EQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPTFLEIV----NLLKD 288
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 31/267 (11%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLLL 290
+G G +G V G+L VAIK L+ + +R+ F E ++ HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 291 GACPDYG--CLVYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V EYM NGSL D LR+ + VI + + IA+ + +L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMG- 167
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
VHRDL NIL++ N V K+SD GLAR++ D Y + PE
Sbjct: 168 --YVHRDLAARNILINSNLVCKVSDFGLARVLED---DPEAAYTTRGGKIPIRWTSPEAI 222
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPAE 463
T+ SD++S+GI+L ++++ R +++ V +A+++G L P P +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L + C + + +RP ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 23/259 (8%)
Query: 236 KIGEGGYGPVYRGKLD-----HTPVAIKVLRPDA---AQGKRQFQQEVEVLSSIRHPNMV 287
K+G+G +G V RG+ D VA+K L+PD + F +EV + S+ H N++
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 288 LLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L G P +V E GSL DRL + ++ R+ A ++A + +L +
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESKR 141
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+HRDL N+LL + KI D GL R +P + V Q H F + PE
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP---FAWCAPES 195
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAA 465
+T + SD + FG+ L ++ T + + S+ + K P P +
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR----PEDCP 251
Query: 466 ESFSKLAIQCAELRKKDRP 484
+ + +QC + +DRP
Sbjct: 252 QDIYNVMVQCWAHKPEDRP 270
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 27/207 (13%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAA-QGKRQFQQEVEVLSSIRHPNMVLL 289
+GEG +G V D T VA+K L+ D Q + ++QE+++L ++ H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 290 LGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
G C D G LV EY+ GSL D L R I + A +I + +LH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHS-- 135
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG---TFCYID 402
+ +HR+L N+LLD + + KI D GLA+ VP +Y+ G F Y
Sbjct: 136 -QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG-----HEYYRVREDGDSPVFWYA- 188
Query: 403 PEYQQTGMLTTKSDIYSFGIMLLQIIT 429
PE + SD++SFG+ L +++T
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 228 TDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQ--GKRQFQQEVEVLSSIRH 283
++ + K+G G YG V R K+ H AIK++R + + +EV VL + H
Sbjct: 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 284 PNMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
PN++ L D LV E G L D ++ R + I ++ + + +L
Sbjct: 96 PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLSGVTYL 152
Query: 342 HQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTF 398
H+ +VHRDLKP N+LL +++ + KI D GL+ + Q M GT
Sbjct: 153 HK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE-------NQKKMKERLGTA 202
Query: 399 CYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMG--LTHHVSRAIEKG 447
YI PE + K D++S G++L ++ P G + R +EKG
Sbjct: 203 YYIAPEVLRKKY-DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKG 252
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 23/259 (8%)
Query: 236 KIGEGGYGPVYRGKLD-----HTPVAIKVLRPDA---AQGKRQFQQEVEVLSSIRHPNMV 287
K+G+G +G V RG+ D VA+K L+PD + F +EV + S+ H N++
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 288 LLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L G P +V E GSL DRL + ++ R+ A ++A + +L +
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESKR 135
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+HRDL N+LL + KI D GL R +P + V Q H F + PE
Sbjct: 136 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP---FAWCAPES 189
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAA 465
+T + SD + FG+ L ++ T + + S+ + K P P +
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR----PEDCP 245
Query: 466 ESFSKLAIQCAELRKKDRP 484
+ + +QC + +DRP
Sbjct: 246 QDIYNVMVQCWAHKPEDRP 264
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 23/259 (8%)
Query: 236 KIGEGGYGPVYRGKLD-----HTPVAIKVLRPDA---AQGKRQFQQEVEVLSSIRHPNMV 287
K+G+G +G V RG+ D VA+K L+PD + F +EV + S+ H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 288 LLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L G P +V E GSL DRL + ++ R+ A ++A + +L +
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESKR 131
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+HRDL N+LL + KI D GL R +P + V Q H F + PE
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVP---FAWCAPES 185
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAA 465
+T + SD + FG+ L ++ T + + S+ + K P P +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR----PEDCP 241
Query: 466 ESFSKLAIQCAELRKKDRP 484
+ + +QC + +DRP
Sbjct: 242 QDIYNVMVQCWAHKPEDRP 260
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 100/207 (48%), Gaps = 27/207 (13%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAA-QGKRQFQQEVEVLSSIRHPNMVLL 289
+GEG +G V D T VA+K L+ D Q + ++QE+++L ++ H +++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 290 LGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
G C D G LV EY+ GSL D L R I + A +I + +LH
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS----IGLAQLLLFAQQICEGMAYLHA-- 135
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG---TFCYID 402
+ +HR+L N+LLD + + KI D GLA+ VP +Y+ G F Y
Sbjct: 136 -QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG-----HEYYRVREDGDSPVFWYA- 188
Query: 403 PEYQQTGMLTTKSDIYSFGIMLLQIIT 429
PE + SD++SFG+ L +++T
Sbjct: 189 PECLKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 31/267 (11%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLLL 290
+G G +G V G+L VAIK L+ + +R+ F E ++ HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 291 GACPDYG--CLVYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V EYM NGSL D LR+ + VI + + IA+ + +L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMG- 167
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
VHRDL NIL++ N V K+SD GL+R++ D Y + PE
Sbjct: 168 --FVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAI 222
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPAE 463
T+ SD++S+GI+L ++++ R +++ V +A+++G L P P +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L + C + + +RP ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G + L + ++ E+A AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELANALS 127
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T+ GT
Sbjct: 128 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTTLCGTLD 176
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 139
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T+ GT
Sbjct: 140 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTTLCGTLD 188
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 189 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 223
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 23/259 (8%)
Query: 236 KIGEGGYGPVYRGKLD-----HTPVAIKVLRPDA---AQGKRQFQQEVEVLSSIRHPNMV 287
K+G+G +G V RG+ D VA+K L+PD + F +EV + S+ H N++
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 288 LLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L G P +V E GSL DRL + ++ R+ A ++A + +L +
Sbjct: 85 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESKR 141
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+HRDL N+LL + KI D GL R +P + V Q H F + PE
Sbjct: 142 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP---FAWCAPES 195
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAA 465
+T + SD + FG+ L ++ T + + S+ + K P P +
Sbjct: 196 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR----PEDCP 251
Query: 466 ESFSKLAIQCAELRKKDRP 484
+ + +QC + +DRP
Sbjct: 252 QDIYNVMVQCWAHKPEDRP 270
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 31/267 (11%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLLL 290
+G G +G V G+L VAIK L+ + +R+ F E ++ HPN++ L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 291 GACPDYG--CLVYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V EYM NGSL D LR+ + VI + + IA+ + +L
Sbjct: 84 GVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMG- 138
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
VHRDL NIL++ N V K+SD GL+R++ D Y + PE
Sbjct: 139 --YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAI 193
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPAE 463
T+ SD++S+GI+L ++++ R +++ V +A+++G L P P +
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 245
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L + C + + +RP ++
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 23/259 (8%)
Query: 236 KIGEGGYGPVYRGKLD-----HTPVAIKVLRPDA---AQGKRQFQQEVEVLSSIRHPNMV 287
K+G+G +G V RG+ D VA+K L+PD + F +EV + S+ H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 288 LLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L G P +V E GSL DRL + ++ R+ A ++A + +L +
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESKR 131
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+HRDL N+LL + KI D GL R +P + V Q H F + PE
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP---FAWCAPES 185
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAA 465
+T + SD + FG+ L ++ T + + S+ + K P P +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR----PEDCP 241
Query: 466 ESFSKLAIQCAELRKKDRP 484
+ + +QC + +DRP
Sbjct: 242 QDIYNVMVQCWAHKPEDRP 260
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 28/231 (12%)
Query: 211 NNDVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAA 265
N + + R++ +E+ F +G+G +G VY R K +A+KVL + + A
Sbjct: 23 NEESKKRQWALED-------FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA 75
Query: 266 QGKRQFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIP 323
+ Q ++EVE+ S +RHPN++ L G D L+ EY G++ L +
Sbjct: 76 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FD 132
Query: 324 WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVA 383
++ E+A AL + H + ++HRD+KP N+LL KI+D G + P S
Sbjct: 133 EQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 189
Query: 384 DSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
D + GT Y+ PE + M K D++S G++ + + + P
Sbjct: 190 DDL--------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 110/227 (48%), Gaps = 32/227 (14%)
Query: 217 RKYTIEEIEEATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQF 271
R++T+E+ F +G+G +G VY R + +A+KVL + + A + Q
Sbjct: 7 RQWTLED-------FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQL 59
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRL--LRRGNTPVIPWRKR 327
++EVE+ S +RHPN++ L G D L+ EY G++ L L R + ++
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE-----QRT 114
Query: 328 FKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVT 387
E+A AL + H + ++HRD+KP N+LL N KI+D G + P S D++
Sbjct: 115 ATYITELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTL- 170
Query: 388 QYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
GT Y+ PE + M K D++S G++ + + P
Sbjct: 171 -------CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 23/259 (8%)
Query: 236 KIGEGGYGPVYRGKLD-----HTPVAIKVLRPDA---AQGKRQFQQEVEVLSSIRHPNMV 287
K+G+G +G V RG+ D VA+K L+PD + F +EV + S+ H N++
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 288 LLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L G P +V E GSL DRL + ++ R+ A ++A + +L +
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESKR 135
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+HRDL N+LL + KI D GL R +P + V Q H F + PE
Sbjct: 136 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP---FAWCAPES 189
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAA 465
+T + SD + FG+ L ++ T + + S+ + K P P +
Sbjct: 190 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR----PEDCP 245
Query: 466 ESFSKLAIQCAELRKKDRP 484
+ + +QC + +DRP
Sbjct: 246 QDIYNVMVQCWAHKPEDRP 264
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 31/267 (11%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLLL 290
+G G +G V G+L VAIK L+ + +R+ F E ++ HPN++ L
Sbjct: 41 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 100
Query: 291 GACPDYG--CLVYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V EYM NGSL D LR+ + VI + + IA+ + +L
Sbjct: 101 GVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMG- 155
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
VHRDL NIL++ N V K+SD GL+R++ D Y + PE
Sbjct: 156 --YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAI 210
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPAE 463
T+ SD++S+GI+L ++++ R +++ V +A+++G L P P +
Sbjct: 211 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 262
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L + C + + +RP ++
Sbjct: 263 CPAALYQLMLDCWQKDRNNRPKFEQIV 289
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 23/259 (8%)
Query: 236 KIGEGGYGPVYRGKLD-----HTPVAIKVLRPDA---AQGKRQFQQEVEVLSSIRHPNMV 287
K+G+G +G V RG+ D VA+K L+PD + F +EV + S+ H N++
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 288 LLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L G P +V E GSL DRL + ++ R+ A ++A + +L +
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLESKR 131
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+HRDL N+LL + KI D GL R +P + V Q H F + PE
Sbjct: 132 ---FIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVP---FAWCAPES 185
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAA 465
+T + SD + FG+ L ++ T + + S+ + K P P +
Sbjct: 186 LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR----PEDCP 241
Query: 466 ESFSKLAIQCAELRKKDRP 484
+ + +QC + +DRP
Sbjct: 242 QDIYNVMVQCWAHKPEDRP 260
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 123
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S D++ GT
Sbjct: 124 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTL--------CGTLD 172
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 31/267 (11%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLLL 290
+G G +G V G+L VAIK L+ + +R+ F E ++ HPN++ L
Sbjct: 51 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 110
Query: 291 GACPDYG--CLVYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V EYM NGSL D LR+ + VI + + IA+ + +L
Sbjct: 111 GVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMG- 165
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
VHRDL NIL++ N V K+SD GL+R++ D Y + PE
Sbjct: 166 --YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAI 220
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPAE 463
T+ SD++S+GI+L ++++ R +++ V +A+++G L P P +
Sbjct: 221 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 272
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L + C + + +RP ++
Sbjct: 273 CPAALYQLMLDCWQKDRNNRPKFEQIV 299
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 109/231 (47%), Gaps = 28/231 (12%)
Query: 211 NNDVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAA 265
N + + R++ +E+ F +G+G +G VY R K +A+KVL + + A
Sbjct: 23 NEESKKRQWALED-------FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKA 75
Query: 266 QGKRQFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIP 323
+ Q ++EVE+ S +RHPN++ L G D L+ EY G++ L +
Sbjct: 76 GVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FD 132
Query: 324 WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVA 383
++ E+A AL + H + ++HRD+KP N+LL KI+D G + P S
Sbjct: 133 EQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-- 187
Query: 384 DSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
T+ GT Y+ PE + M K D++S G++ + + + P
Sbjct: 188 ------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 31/267 (11%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLLL 290
+G G +G V G+L VAIK L+ + +R+ F E ++ HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 291 GACPDYG--CLVYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V EYM NGSL D LR+ + VI + + IA+ + +L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMG- 167
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
VHRDL NIL++ N V K+SD GL+R++ D Y + PE
Sbjct: 168 --YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAI 222
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPAE 463
T+ SD++S+GI+L ++++ R +++ V +A+++G L P P +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L + C + + +RP ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 31/267 (11%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLLL 290
+G G +G V G+L VAIK L+ + +R+ F E ++ HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 291 GACPDYG--CLVYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V EYM NGSL D LR+ + VI + + IA+ + +L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMG- 167
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
VHRDL NIL++ N V K+SD GL+R++ D Y + PE
Sbjct: 168 --YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAI 222
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPAE 463
T+ SD++S+GI+L ++++ R +++ V +A+++G L P P +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L + C + + +RP ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 31/267 (11%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLLL 290
+G G +G V G+L VAIK L+ + +R+ F E ++ HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 291 GACPDYG--CLVYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V EYM NGSL D LR+ + VI + + IA+ + +L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMG- 167
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
VHRDL NIL++ N V K+SD GL+R++ D Y + PE
Sbjct: 168 --YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAI 222
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPAE 463
T+ SD++S+GI+L ++++ R +++ V +A+++G L P P +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L + C + + +RP ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 118/267 (44%), Gaps = 35/267 (13%)
Query: 236 KIGEGGYGPVYRGKL--DHTPVAIKVLR----PDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
+IG G +G V+ G+L D+T VA+K R PD K +F QE +L HPN+V L
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL---KAKFLQEARILKQYSHPNIVRL 177
Query: 290 LGAC----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
+G C P Y +V E + G L G + + ++ + A + +L +
Sbjct: 178 IGVCTQKQPIY--IVMELVQGGDFLTFLRTEGARLRV--KTLLQMVGDAAAGMEYL---E 230
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ +HRDL N L+ V KISD G++R AD V + PE
Sbjct: 231 SKCCIHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVXAASGGLRQVPVKWTAPEA 286
Query: 406 QQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTHHVSRA-IEKGTLAEMLDPAVTDWPA 462
G +++SD++SFGI+L + + SP L++ +R +EKG P
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPC--------PE 338
Query: 463 EAAESFSKLAIQCAELRKKDRPDLGTV 489
++ +L QC RP T+
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQRPSFSTI 365
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 124/267 (46%), Gaps = 31/267 (11%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLLL 290
+G G +G V G+L VAIK L+ + +R+ F E ++ HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 291 GACPDYG--CLVYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V EYM NGSL D LR+ + VI + + IA+ + +L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMG- 167
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
VHRDL NIL++ N V K+SD GL+R++ D Y + PE
Sbjct: 168 --YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAI 222
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPAE 463
T+ SD++S+GI+L ++++ R +++ V +A+++G L P P +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L + C + + +RP ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 123/267 (46%), Gaps = 31/267 (11%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLLL 290
+G G +G V G+L VAIK L+ + +R+ F E ++ HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 291 GACPDYG--CLVYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V EYM NGSL D LR+ + VI + + IA+ + +L
Sbjct: 113 GVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMG- 167
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
VHRDL NIL++ N V K+SD GL R++ D Y + PE
Sbjct: 168 --YVHRDLAARNILINSNLVCKVSDFGLGRVLED---DPEAAYTTRGGKIPIRWTSPEAI 222
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPAE 463
T+ SD++S+GI+L ++++ R +++ V +A+++G L P P +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L + C + + +RP ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 118/267 (44%), Gaps = 35/267 (13%)
Query: 236 KIGEGGYGPVYRGKL--DHTPVAIKVLR----PDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
+IG G +G V+ G+L D+T VA+K R PD K +F QE +L HPN+V L
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDL---KAKFLQEARILKQYSHPNIVRL 177
Query: 290 LGAC----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
+G C P Y +V E + G L G + + ++ + A + +L +
Sbjct: 178 IGVCTQKQPIY--IVMELVQGGDFLTFLRTEGARLRV--KTLLQMVGDAAAGMEYL---E 230
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ +HRDL N L+ V KISD G++R AD V + PE
Sbjct: 231 SKCCIHRDLAARNCLVTEKNVLKISDFGMSR----EEADGVYAASGGLRQVPVKWTAPEA 286
Query: 406 QQTGMLTTKSDIYSFGIMLLQIIT-ARSPM-GLTHHVSRA-IEKGTLAEMLDPAVTDWPA 462
G +++SD++SFGI+L + + SP L++ +R +EKG P
Sbjct: 287 LNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPC--------PE 338
Query: 463 EAAESFSKLAIQCAELRKKDRPDLGTV 489
++ +L QC RP T+
Sbjct: 339 LCPDAVFRLMEQCWAYEPGQRPSFSTI 365
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 103/215 (47%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 123
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T+ +GT
Sbjct: 124 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSCHAPSS--------RRTTLSGTLD 172
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 101/205 (49%), Gaps = 22/205 (10%)
Query: 237 IGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRHPNMVLLLG 291
+G G +G V+ R + + A+KVL+ + +Q + E +LS + HP ++ + G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 292 ACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
D ++ +Y+ G L LLR+ P K + AAE+ AL +LH +
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFS-LLRKSQRFPNPVAKFY--AAEVCLALEYLHSKD---I 127
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
++RDLKP NILLD+N KI+D G A+ VP VT GT YI PE T
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVT----YXLCGTPDYIAPEVVSTK 178
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
D +SFGI++ +++ +P
Sbjct: 179 PYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 125
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T+ GT
Sbjct: 126 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTTLCGTLD 174
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 127
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T+ GT
Sbjct: 128 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTTLCGTLD 176
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 109/227 (48%), Gaps = 32/227 (14%)
Query: 217 RKYTIEEIEEATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQF 271
R++T+E+ F +G+G +G VY R + +A+KVL + + A + Q
Sbjct: 7 RQWTLED-------FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQL 59
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRL--LRRGNTPVIPWRKR 327
++EVE+ S +RHPN++ L G D L+ EY G++ L L R + ++
Sbjct: 60 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDE-----QRT 114
Query: 328 FKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVT 387
E+A AL + H + ++HRD+KP N+LL N KI+D G + P S
Sbjct: 115 ATYITELANALSYCHSKR---VIHRDIKPENLLLGSNGELKIADFGWSVHAPSS------ 165
Query: 388 QYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
T+ GT Y+ PE + M K D++S G++ + + P
Sbjct: 166 --RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 128/275 (46%), Gaps = 33/275 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP----VAIKVLRPDAAQGKR-QFQQEVEVLSSIRH 283
D F + ++G G G V+ K+ H P +A K++ + R Q +E++VL
Sbjct: 25 DDFEKISELGAGNGGVVF--KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 82
Query: 284 PNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P +V GA G + E+M GSL+ L + G IP + K++ + L +L
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYL 139
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
+ ++HRD+KP+NIL++ K+ D G++ + S+A+S GT Y+
Sbjct: 140 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--------GTRSYM 189
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWP 461
PE Q + +SDI+S G+ L+++ R P+G + S AI E+LD V + P
Sbjct: 190 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIG-SGSGSMAI-----FELLDYIVNEPP 243
Query: 462 AEAAESFSKLAIQ-----CAELRKKDRPDLGTVIV 491
+ L Q C +R DL ++V
Sbjct: 244 PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 278
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 122
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T+ GT
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTTLCGTLD 171
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 116/267 (43%), Gaps = 31/267 (11%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQ-GKRQFQQEVEVLSSIRHPNMVLLL 290
IG G G V G+L PVAIK L+ + +R F E ++ HPN++ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 291 GACPD--YGCLVYEYMHNGSLEDRLLRR--GNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V EYM NGSL D LR G ++ + + + + +L
Sbjct: 117 GVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIM---QLVGMLRGVGAGMRYLSDLG- 171
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
VHRDL N+L+D N V K+SD GL+R++ D Y T + PE
Sbjct: 172 --YVHRDLAARNVLVDSNLVCKVSDFGLSRVLED---DPDAAYTTTGGKIPIRWTAPEAI 226
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPAE 463
++ SD++SFG+++ +++ R +T+ V ++E+G PA P
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL----PA----PMG 278
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L + C + RP ++
Sbjct: 279 CPHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 125
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T+ GT
Sbjct: 126 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTTLCGTLD 174
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 126
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T+ GT
Sbjct: 127 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTTLCGTLD 175
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 210
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 123
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T GT
Sbjct: 124 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTDLCGTLD 172
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 173 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 122
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T GT
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTDLCGTLD 171
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 121
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T+ GT
Sbjct: 122 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTTLCGTLD 170
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 171 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 205
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 122
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T GT
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTELCGTLD 171
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 127
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T GT
Sbjct: 128 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTDLCGTLD 176
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 125
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S D + GT
Sbjct: 126 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDL--------CGTLD 174
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 122
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T GT
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTDLCGTLD 171
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 105/217 (48%), Gaps = 20/217 (9%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVE 276
+ EE KF + ++G+G +G V Y D+T VA+K L+ + R F++E+E
Sbjct: 9 QFEERHLKFLQ--QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 66
Query: 277 VLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA 332
+L S++H N+V G C G L+ EY+ GSL D L + + I K + +
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL--QAHAERIDHIKLLQYTS 124
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+I + +L + +HRDL NIL++ KI D GL +++P +
Sbjct: 125 QICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEXXKVKEP 179
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ F Y PE + SD++SFG++L ++ T
Sbjct: 180 GESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 106/220 (48%), Gaps = 26/220 (11%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVE 276
+ EE KF + ++G+G +G V Y D+T VA+K L+ + R F++E+E
Sbjct: 7 QFEERHLKFLQ--QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 64
Query: 277 VLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA 332
+L S++H N+V G C G L+ EY+ GSL D L + I K + +
Sbjct: 65 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTS 122
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+I + +L + +HR+L NIL++ KI D GL +++P +Y+
Sbjct: 123 QICKGMEYLGTKR---YIHRNLATRNILVENENRVKIGDFGLTKVLPQD-----KEYYKV 174
Query: 393 SAAG---TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
G F Y PE + SD++SFG++L ++ T
Sbjct: 175 KEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQ 272
+ + + EE KF + ++G+G +G V Y D+T VA+K L+ + R F+
Sbjct: 20 HNMTQFEERHLKFLQ--QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 77
Query: 273 QEVEVLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRF 328
+E+E+L S++H N+V G C G L+ EY+ GSL D L + I K
Sbjct: 78 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLL 135
Query: 329 KIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQ 388
+ ++I + +L + +HRDL NIL++ KI D GL +++P +
Sbjct: 136 QYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEXXK 190
Query: 389 YHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ F Y PE + SD++SFG++L ++ T
Sbjct: 191 VKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 122
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T GT
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTXLCGTLD 171
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 119
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T+ GT
Sbjct: 120 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTTLCGTLD 168
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 169 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 203
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 36/234 (15%)
Query: 236 KIGEGGYGPVY--RGKLDHTPVAIKVLR---------PDAAQGKRQFQQEV----EVLSS 280
K+G G YG V + K H+ AIKV++ D + +F +E+ +L S
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 281 IRHPNMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATAL 338
+ HPN++ L D Y LV E+ G L ++++ R I +I + +
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN---IMKQILSGI 159
Query: 339 LFLHQAKPEPLVHRDLKPANILL-DRNYV--SKISDVGLARLVPPSVADSVTQYHMTSAA 395
+LH+ +VHRD+KP NILL ++N + KI D GL+ Y +
Sbjct: 160 CYLHK---HNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKD-------YKLRDRL 209
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTH--HVSRAIEKG 447
GT YI PE + K D++S G+++ ++ P G + + + +EKG
Sbjct: 210 GTAYYIAPEVLKKKY-NEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKG 262
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 124
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI++ G + P S T+ GT
Sbjct: 125 YCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSS--------RRTTLCGTLD 173
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 20/221 (9%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQ 272
+ + + EE KF + ++G+G +G V Y D+T VA+K L+ + R F+
Sbjct: 20 HNMTQFEERHLKFLQ--QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFE 77
Query: 273 QEVEVLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRF 328
+E+E+L S++H N+V G C G L+ EY+ GSL D L + I K
Sbjct: 78 REIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLL 135
Query: 329 KIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQ 388
+ ++I + +L + +HRDL NIL++ KI D GL +++P +
Sbjct: 136 QYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEXXK 190
Query: 389 YHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ F Y PE + SD++SFG++L ++ T
Sbjct: 191 VKEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVE 276
+ EE KF + ++G+G +G V Y D+T VA+K L+ + R F++E+E
Sbjct: 13 QFEERHLKFLQ--QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 70
Query: 277 VLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA 332
+L S++H N+V G C G L+ EY+ GSL D L + I K + +
Sbjct: 71 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTS 128
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+I + +L + +HRDL NIL++ KI D GL +++P +
Sbjct: 129 QICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEXXKVKEP 183
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ F Y PE + SD++SFG++L ++ T
Sbjct: 184 GESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVE 276
+ EE KF + ++G+G +G V Y D+T VA+K L+ + R F++E+E
Sbjct: 9 QFEERHLKFLQ--QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 66
Query: 277 VLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA 332
+L S++H N+V G C G L+ EY+ GSL D L + I K + +
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTS 124
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+I + +L + +HRDL NIL++ KI D GL +++P +
Sbjct: 125 QICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEXXKVKEP 179
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ F Y PE + SD++SFG++L ++ T
Sbjct: 180 GESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVE 276
+ EE KF + ++G+G +G V Y D+T VA+K L+ + R F++E+E
Sbjct: 11 QFEERHLKFLQ--QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 68
Query: 277 VLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA 332
+L S++H N+V G C G L+ EY+ GSL D L + I K + +
Sbjct: 69 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTS 126
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+I + +L + +HRDL NIL++ KI D GL +++P +
Sbjct: 127 QICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEXXKVKEP 181
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ F Y PE + SD++SFG++L ++ T
Sbjct: 182 GESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVE 276
+ EE KF + ++G+G +G V Y D+T VA+K L+ + R F++E+E
Sbjct: 12 QFEERHLKFLQ--QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 69
Query: 277 VLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA 332
+L S++H N+V G C G L+ EY+ GSL D L + I K + +
Sbjct: 70 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTS 127
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+I + +L + +HRDL NIL++ KI D GL +++P +
Sbjct: 128 QICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEXXKVKEP 182
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ F Y PE + SD++SFG++L ++ T
Sbjct: 183 GESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVE 276
+ EE KF + ++G+G +G V Y D+T VA+K L+ + R F++E+E
Sbjct: 6 QFEERHLKFLQ--QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63
Query: 277 VLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA 332
+L S++H N+V G C G L+ EY+ GSL D L + I K + +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTS 121
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+I + +L + +HRDL NIL++ KI D GL +++P +
Sbjct: 122 QICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEXXKVKEP 176
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ F Y PE + SD++SFG++L ++ T
Sbjct: 177 GESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 27/207 (13%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAA-QGKRQFQQEVEVLSSIRHPNMVLL 289
+GEG +G V D T VA+K L+ Q + +Q+E+E+L ++ H ++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 290 LGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
G C D G LV EY+ GSL D L R + + A +I + +LH
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH----CVGLAQLLLFAQQICEGMAYLH--- 129
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG---TFCYID 402
+ +HR L N+LLD + + KI D GLA+ VP +Y+ G F Y
Sbjct: 130 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG-----HEYYRVREDGDSPVFWYA- 183
Query: 403 PEYQQTGMLTTKSDIYSFGIMLLQIIT 429
PE + SD++SFG+ L +++T
Sbjct: 184 PECLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVE 276
+ EE KF + ++G+G +G V Y D+T VA+K L+ + R F++E+E
Sbjct: 10 QFEERHLKFLQ--QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 67
Query: 277 VLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA 332
+L S++H N+V G C G L+ EY+ GSL D L + I K + +
Sbjct: 68 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTS 125
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+I + +L + +HRDL NIL++ KI D GL +++P +
Sbjct: 126 QICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEXXKVKEP 180
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ F Y PE + SD++SFG++L ++ T
Sbjct: 181 GESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVE 276
+ EE KF + ++G+G +G V Y D+T VA+K L+ + R F++E+E
Sbjct: 37 QFEERHLKFLQ--QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 94
Query: 277 VLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA 332
+L S++H N+V G C G L+ EY+ GSL D L + I K + +
Sbjct: 95 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTS 152
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+I + +L + +HRDL NIL++ KI D GL +++P +
Sbjct: 153 QICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEXXKVKEP 207
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ F Y PE + SD++SFG++L ++ T
Sbjct: 208 GESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 100/215 (46%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G + L + ++ E+A AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK---FDEQRTATYITELANALS 127
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S + GT
Sbjct: 128 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLX--------GTLD 176
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 177 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVE 276
+ EE KF + ++G+G +G V Y D+T VA+K L+ + R F++E+E
Sbjct: 5 QFEERHLKFLQ--QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 62
Query: 277 VLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA 332
+L S++H N+V G C G L+ EY+ GSL D L + I K + +
Sbjct: 63 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTS 120
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+I + +L + +HRDL NIL++ KI D GL +++P +
Sbjct: 121 QICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEXXKVKEP 175
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ F Y PE + SD++SFG++L ++ T
Sbjct: 176 GESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 98/207 (47%), Gaps = 27/207 (13%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAA-QGKRQFQQEVEVLSSIRHPNMVLL 289
+GEG +G V D T VA+K L+ Q + +Q+E+E+L ++ H ++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 290 LGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
G C D G LV EY+ GSL D L R + + A +I + +LH
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRH----CVGLAQLLLFAQQICEGMAYLH--- 128
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG---TFCYID 402
+ +HR L N+LLD + + KI D GLA+ VP +Y+ G F Y
Sbjct: 129 AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG-----HEYYRVREDGDSPVFWYA- 182
Query: 403 PEYQQTGMLTTKSDIYSFGIMLLQIIT 429
PE + SD++SFG+ L +++T
Sbjct: 183 PECLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 24/225 (10%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVE 276
+ EE KF + ++G+G +G V Y D+T VA+K L+ + R F++E+E
Sbjct: 6 QFEERHLKFLQ--QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63
Query: 277 VLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA 332
+L S++H N+V G C G L+ EY+ GSL D L + I K + +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTS 121
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+I + +L + +HRDL NIL++ KI D GL +++P +
Sbjct: 122 QICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEXXKVKEP 176
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT----ARSP 433
+ F Y PE + SD++SFG++L ++ T ++SP
Sbjct: 177 GESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 30/228 (13%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVE 276
+ EE KF + ++G+G +G V Y D+T VA+K L+ + R F++E+E
Sbjct: 6 QFEERHLKFLQ--QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 63
Query: 277 VLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA 332
+L S++H N+V G C G L+ EY+ GSL D L + I K + +
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTS 121
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+I + +L + +HRDL NIL++ KI D GL +++P ++
Sbjct: 122 QICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD-----KEFFKV 173
Query: 393 SAAG---TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT----ARSP 433
G F Y PE + SD++SFG++L ++ T ++SP
Sbjct: 174 KEPGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 220
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 24/225 (10%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVE 276
+ EE KF + ++G+G +G V Y D+T VA+K L+ + R F++E+E
Sbjct: 4 QFEERHLKFLQ--QLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 61
Query: 277 VLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA 332
+L S++H N+V G C G L+ EY+ GSL D L + I K + +
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER--IDHIKLLQYTS 119
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+I + +L + +HRDL NIL++ KI D GL +++P +
Sbjct: 120 QICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEXXKVKEP 174
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT----ARSP 433
+ F Y PE + SD++SFG++L ++ T ++SP
Sbjct: 175 GESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP 218
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 122/288 (42%), Gaps = 61/288 (21%)
Query: 237 IGEGGYGPV-------YRGKLDHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHPNMVL 288
+GEG +G V +G+ +T VA+K+L+ +A+ + R E VL + HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 289 LLGACPDYG--CLVYEYMHNGSL-----------------------------EDRLLRRG 317
L GAC G L+ EY GSL ++R L G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 318 NTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARL 377
+ W +I+ + +L + K LVHRDL NIL+ KISD GL+R
Sbjct: 151 DLISFAW--------QISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLT 437
V DS + + I+ + + TT+SD++SFG++L +I+T L
Sbjct: 200 VYEE--DSXVKRSQGRIPVKWMAIESLFDH--IYTTQSDVWSFGVLLWEIVT------LG 249
Query: 438 HHVSRAIEKGTLAEMLDPA-VTDWPAEAAESFSKLAIQCAELRKKDRP 484
+ I L +L + P +E +L +QC + RP
Sbjct: 250 GNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 122
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H K ++HRD+KP N+LL KI+D G + P S + GT
Sbjct: 123 YCHSKK---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRAALCGTLD 171
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 102/215 (47%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 125
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI++ G + P S T+ GT
Sbjct: 126 YCHSKR---VIHRDIKPENLLLGSAGELKIANFGWSVHAPSS--------RRTTLCGTLD 174
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 122/288 (42%), Gaps = 61/288 (21%)
Query: 237 IGEGGYGPV-------YRGKLDHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHPNMVL 288
+GEG +G V +G+ +T VA+K+L+ +A+ + R E VL + HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 289 LLGACPDYG--CLVYEYMHNGSL-----------------------------EDRLLRRG 317
L GAC G L+ EY GSL ++R L G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 318 NTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARL 377
+ W +I+ + +L + K LVHRDL NIL+ KISD GL+R
Sbjct: 151 DLISFAW--------QISQGMQYLAEMK---LVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLT 437
V DS + + I+ + + TT+SD++SFG++L +I+T L
Sbjct: 200 VYEE--DSYVKRSQGRIPVKWMAIESLFDH--IYTTQSDVWSFGVLLWEIVT------LG 249
Query: 438 HHVSRAIEKGTLAEMLDPA-VTDWPAEAAESFSKLAIQCAELRKKDRP 484
+ I L +L + P +E +L +QC + RP
Sbjct: 250 GNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 31/267 (11%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLLL 290
+G G +G V G+L VAIK L+ + +R+ F E ++ HPN++ L
Sbjct: 24 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 83
Query: 291 GACPDYG--CLVYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V E M NGSL D LR+ + VI + + IA+ + +L
Sbjct: 84 GVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMG- 138
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
VHRDL NIL++ N V K+SD GL+R++ D Y + PE
Sbjct: 139 --YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAI 193
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPAE 463
T+ SD++S+GI+L ++++ R +++ V +A+++G L P P +
Sbjct: 194 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 245
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L + C + + +RP ++
Sbjct: 246 CPAALYQLMLDCWQKDRNNRPKFEQIV 272
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 101/203 (49%), Gaps = 26/203 (12%)
Query: 236 KIGEGGYGPVYRGKLD-HTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC- 293
++G G +G V GK VA+K+++ + + + +F QE + + + HP +V G C
Sbjct: 15 ELGSGQFGVVKLGKWKGQYDVAVKMIK-EGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCS 73
Query: 294 ---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL--HQAKPEP 348
P Y +V EY+ NG L + L G + + ++ ++ + FL HQ
Sbjct: 74 KEYPIY--IVTEYISNGCLLNYLRSHGKG--LEPSQLLEMCYDVCEGMAFLESHQ----- 124
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLV--PPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
+HRDL N L+DR+ K+SD G+ R V V+ T++ + +A PE
Sbjct: 125 FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSA-------PEVF 177
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT 429
++KSD+++FGI++ ++ +
Sbjct: 178 HYFKYSSKSDVWAFGILMWEVFS 200
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 125
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S + GT
Sbjct: 126 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRAALCGTLD 174
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 127
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S T+ GT
Sbjct: 128 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRTTLCGTLD 176
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + K D++S G++ + + + P
Sbjct: 177 YLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 31/267 (11%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLLL 290
+G G +G V G+L VAIK L+ + +R+ F E ++ HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 291 GACPDYG--CLVYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V E M NGSL D LR+ + VI + + IA+ + +L
Sbjct: 113 GVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMGA 168
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
VHRDL NIL++ N V K+SD GL+R++ D Y + PE
Sbjct: 169 ---VHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAI 222
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPAE 463
T+ SD++S+GI+L ++++ R +++ V +A+++G L P P +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L + C + + +RP ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 124
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S + GT
Sbjct: 125 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL--------CGTLD 173
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 174 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 31/267 (11%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLLL 290
+G G +G V G+L VAIK L+ + +R+ F E ++ HPN++ L
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 291 GACPDYG--CLVYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V E M NGSL D LR+ + VI + + IA+ + +L
Sbjct: 113 GVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVI---QLVGMLRGIASGMKYLSDMG- 167
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
VHRDL NIL++ N V K+SD GL+R++ D Y + PE
Sbjct: 168 --YVHRDLAARNILINSNLVCKVSDFGLSRVLED---DPEAAYTTRGGKIPIRWTSPEAI 222
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWPAE 463
T+ SD++S+GI+L ++++ R +++ V +A+++G L P P +
Sbjct: 223 AYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGY---RLPP-----PMD 274
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L + C + + +RP ++
Sbjct: 275 CPAALYQLMLDCWQKDRNNRPKFEQIV 301
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 237 IGEGGYGPVYRGKLD-----HTPVAIKVLRPDAAQ-GKRQFQQEVEVLSSIRHPNMVLLL 290
IG G G V G+L PVAIK L+ + +R F E ++ HPN++ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 291 GACPD--YGCLVYEYMHNGSLEDRLLRR--GNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
G +V EYM NGSL D LR G ++ + + + + +L
Sbjct: 117 GVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIM---QLVGMLRGVGAGMRYLSDLG- 171
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLV--PPSVADSVTQYHMTSAAGTFCYIDPE 404
VHRDL N+L+D N V K+SD GL+R++ P A + T + + PE
Sbjct: 172 --YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI-----PIRWTAPE 224
Query: 405 YQQTGMLTTKSDIYSFGIMLLQIIT--ARSPMGLTHH-VSRAIEKGTLAEMLDPAVTDWP 461
++ SD++SFG+++ +++ R +T+ V ++E+G PA P
Sbjct: 225 AIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL----PA----P 276
Query: 462 AEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ +L + C + RP ++
Sbjct: 277 MGCPHALHQLMLDCWHKDRAQRPRFSQIV 305
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 122
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S + GT
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------RRAALCGTLD 171
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 29/234 (12%)
Query: 268 KRQFQQEVEVLSSIRHPNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWR 325
+R F +EV+V+ + HPN++ +G L + EY+ G+L R + + PW
Sbjct: 51 QRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL--RGIIKSMDSQYPWS 108
Query: 326 KRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADS 385
+R A +IA+ + +LH ++HRDL N L+ N ++D GLARL + D
Sbjct: 109 QRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARL----MVDE 161
Query: 386 VTQ------------YHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
TQ + G ++ PE K D++SFGI+L +II +
Sbjct: 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVN- 220
Query: 434 MGLTHHVSRAIEKG-TLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
++ R ++ G + LD P SF + ++C +L + RP
Sbjct: 221 -ADPDYLPRTMDFGLNVRGFLDRYC---PPNCPPSFFPITVRCCDLDPEKRPSF 270
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 117/264 (44%), Gaps = 23/264 (8%)
Query: 237 IGEGGYGPVYRGKL-----DHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLL 290
IG+G +G VY G+ + AIK L R Q F +E ++ + HPN++ L+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALI 88
Query: 291 GA-CPDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPE 347
G P G ++ YM +G L + P + + ++A + +L + K
Sbjct: 89 GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTV--KDLISFGLQVARGMEYLAEQK-- 144
Query: 348 PLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQ 407
VHRDL N +LD ++ K++D GLAR + SV Q+ + + E Q
Sbjct: 145 -FVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTAL--ESLQ 201
Query: 408 TGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPA-VTDWPAEAAE 466
T TTKSD++SFG++L +++T +P R I+ L L P +
Sbjct: 202 TYRFTTKSDVWSFGVLLWELLTRGAP------PYRHIDPFDLTHFLAQGRRLPQPEYCPD 255
Query: 467 SFSKLAIQCAELRKKDRPDLGTVI 490
S ++ QC E RP ++
Sbjct: 256 SLYQVMQQCWEADPAVRPTFRVLV 279
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 125
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S + GT
Sbjct: 126 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL--------CGTLD 174
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 175 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSI 281
A + F +G+G +G VY R K +A+KVL + + A + Q ++EVE+ S +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L G D L+ EY G++ L + ++ E+A AL
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK---FDEQRTATYITELANALS 122
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ H + ++HRD+KP N+LL KI+D G + P S + GT
Sbjct: 123 YCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL--------CGTLD 171
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + M K D++S G++ + + + P
Sbjct: 172 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 23/215 (10%)
Query: 237 IGEGGYGPV----YRGKLDHT--PVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHPNMVLL 289
+GEG +G V Y + D+T VA+K L+P++ ++E+E+L ++ H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 290 LGACPDYGC----LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
G C + G L+ E++ +GSL++ L + N I +++ K A +I + +L +
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--INLKQQLKYAVQICKGMDYLGSRQ 146
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
VHRDL N+L++ + KI D GL + + + S F Y PE
Sbjct: 147 ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV--FWYA-PEC 200
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITA----RSPMGL 436
SD++SFG+ L +++T SPM L
Sbjct: 201 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL 235
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 37/211 (17%)
Query: 237 IGEGGYGPVYRG------KLDHTPVAIKVLRPDAA-QGKRQFQQEVEVLSSIRHPNMVLL 289
+G G +G VY+G + PVAIK+L + +F E +++S+ HP++V L
Sbjct: 23 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 82
Query: 290 LGACPD-----------YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATAL 338
LG C +GCL+ EY+H +D + G+ ++ W +IA +
Sbjct: 83 LGVCLSPTIQLVTQLMPHGCLL-EYVHEH--KDNI---GSQLLLNW------CVQIAKGM 130
Query: 339 LFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTF 398
++L + + LVHRDL N+L+ KI+D GLARL + +Y+
Sbjct: 131 MYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARL----LEGDEKEYNADGGKMPI 183
Query: 399 CYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
++ E T +SD++S+G+ + +++T
Sbjct: 184 KWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 127/280 (45%), Gaps = 27/280 (9%)
Query: 224 IEEATDKFSEAMKIGEGGYGPVYRGKLDHTP----VAIKVLRPDAAQGKR-QFQQEVEVL 278
+E D F + ++G G G V+ K+ H P +A K++ + R Q +E++VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVF--KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 279 SSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIAT 336
P +V GA G + E+M GSL+ L + G IP + K++ +
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIK 115
Query: 337 ALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
L +L + ++HRD+KP+NIL++ K+ D G++ + S+A+S G
Sbjct: 116 GLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--------G 165
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPA 456
T Y+ PE Q + +SDI+S G+ L+++ R P+ + + E+LD
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYI 225
Query: 457 VTDWPAEAAESFSKLAIQ-----CAELRKKDRPDLGTVIV 491
V + P + L Q C +R DL ++V
Sbjct: 226 VNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 265
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 122/263 (46%), Gaps = 29/263 (11%)
Query: 226 EATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQG-KRQFQQEVEVLSSI 281
E + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 282 RHPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATAL 338
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGL 123
Query: 339 LFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTF 398
F H + ++HRDLKP N+L++ K++D GLAR A V T T
Sbjct: 124 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYTHEVVTL 174
Query: 399 CYIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAE 451
Y PE +T DI+S G + +++T R S + + R + GT E
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDE 232
Query: 452 MLDPAVTDWPAEAAESFSKLAIQ 474
++ P VT P + SF K A Q
Sbjct: 233 VVWPGVTSMP-DYKPSFPKWARQ 254
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 122/263 (46%), Gaps = 29/263 (11%)
Query: 226 EATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSI 281
E + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 282 RHPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATAL 338
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 67 NHPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGL 123
Query: 339 LFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTF 398
F H + ++HRDLKP N+L++ K++D GLAR A V T T
Sbjct: 124 AFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYTHEVVTL 174
Query: 399 CYIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAE 451
Y PE +T DI+S G + +++T R S + + R + GT E
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDE 232
Query: 452 MLDPAVTDWPAEAAESFSKLAIQ 474
++ P VT P + SF K A Q
Sbjct: 233 VVWPGVTSMP-DYKPSFPKWARQ 254
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 122/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQG-KRQFQQEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++H L+D + T + +P K + ++ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLF--QLLQGLA 117
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 118 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 168
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 226
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 227 VWPGVTSMP-DYKPSFPKWARQ 247
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 121/288 (42%), Gaps = 61/288 (21%)
Query: 237 IGEGGYGPV-------YRGKLDHTPVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHPNMVL 288
+GEG +G V +G+ +T VA+K+L+ +A+ + R E VL + HP+++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIK 90
Query: 289 LLGACPDYG--CLVYEYMHNGSL-----------------------------EDRLLRRG 317
L GAC G L+ EY GSL ++R L G
Sbjct: 91 LYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMG 150
Query: 318 NTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARL 377
+ W +I+ + +L + LVHRDL NIL+ KISD GL+R
Sbjct: 151 DLISFAW--------QISQGMQYLAEMS---LVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLT 437
V DS + + I+ + + TT+SD++SFG++L +I+T L
Sbjct: 200 VYEE--DSXVKRSQGRIPVKWMAIESLFDH--IYTTQSDVWSFGVLLWEIVT------LG 249
Query: 438 HHVSRAIEKGTLAEMLDPA-VTDWPAEAAESFSKLAIQCAELRKKDRP 484
+ I L +L + P +E +L +QC + RP
Sbjct: 250 GNPYPGIPPERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRP 297
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 23/215 (10%)
Query: 237 IGEGGYGPV----YRGKLDHT--PVAIKVLRPDAAQGK-RQFQQEVEVLSSIRHPNMVLL 289
+GEG +G V Y + D+T VA+K L+P++ ++E+E+L ++ H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 290 LGACPDYGC----LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
G C + G L+ E++ +GSL++ L + N I +++ K A +I + +L +
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK--INLKQQLKYAVQICKGMDYLGSRQ 134
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
VHRDL N+L++ + KI D GL + + + S F Y PE
Sbjct: 135 ---YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPV--FWYA-PEC 188
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITA----RSPMGL 436
SD++SFG+ L +++T SPM L
Sbjct: 189 LMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL 223
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 102/211 (48%), Gaps = 37/211 (17%)
Query: 237 IGEGGYGPVYRG------KLDHTPVAIKVLRPDAA-QGKRQFQQEVEVLSSIRHPNMVLL 289
+G G +G VY+G + PVAIK+L + +F E +++S+ HP++V L
Sbjct: 46 LGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRL 105
Query: 290 LGACPD-----------YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATAL 338
LG C +GCL+ EY+H +D + G+ ++ W +IA +
Sbjct: 106 LGVCLSPTIQLVTQLMPHGCLL-EYVHEH--KDNI---GSQLLLNW------CVQIAKGM 153
Query: 339 LFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTF 398
++L + + LVHRDL N+L+ KI+D GLARL + +Y+
Sbjct: 154 MYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARL----LEGDEKEYNADGGKMPI 206
Query: 399 CYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
++ E T +SD++S+G+ + +++T
Sbjct: 207 KWMALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 121/260 (46%), Gaps = 29/260 (11%)
Query: 229 DKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIRHP 284
+ F + KIGEG YG VY R KL VA+K +R D +G +E+ +L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 285 NMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALLFL 341
N+V LL + LV+E++H L+ + T + +P K + ++ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLAFC 119
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP N+L++ K++D GLAR A V T T Y
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYTHEVVTLWYR 170
Query: 402 DPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEMLD 454
PE +T DI+S G + +++T R S + + R + GT E++
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVW 228
Query: 455 PAVTDWPAEAAESFSKLAIQ 474
P VT P + SF K A Q
Sbjct: 229 PGVTSMP-DYKPSFPKWARQ 247
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 121/260 (46%), Gaps = 29/260 (11%)
Query: 229 DKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIRHP 284
+ F + KIGEG YG VY R KL VA+K +R D +G +E+ +L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 285 NMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALLFL 341
N+V LL + LV+E++H L+ + T + +P K + ++ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLAFC 118
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP N+L++ K++D GLAR A V T T Y
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYTHEVVTLWYR 169
Query: 402 DPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEMLD 454
PE +T DI+S G + +++T R S + + R + GT E++
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVW 227
Query: 455 PAVTDWPAEAAESFSKLAIQ 474
P VT P + SF K A Q
Sbjct: 228 PGVTSMP-DYKPSFPKWARQ 246
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 121/260 (46%), Gaps = 29/260 (11%)
Query: 229 DKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIRHP 284
+ F + KIGEG YG VY R KL VA+K +R D +G +E+ +L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 285 NMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALLFL 341
N+V LL + LV+E++H L+ + T + +P K + ++ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLAFC 118
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP N+L++ K++D GLAR A V T T Y
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYTHEVVTLWYR 169
Query: 402 DPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEMLD 454
PE +T DI+S G + +++T R S + + R + GT E++
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVW 227
Query: 455 PAVTDWPAEAAESFSKLAIQ 474
P VT P + SF K A Q
Sbjct: 228 PGVTSMP-DYKPSFPKWARQ 246
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 122/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLA 118
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T T
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYTHEVVTLW 169
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 227
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 228 VWPGVTSMP-DYKPSFPKWARQ 248
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 121/260 (46%), Gaps = 29/260 (11%)
Query: 229 DKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIRHP 284
+ F + KIGEG YG VY R KL VA+K +R D +G +E+ +L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 285 NMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALLFL 341
N+V LL + LV+E++H L+ + T + +P K + ++ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLAFC 119
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP N+L++ K++D GLAR A V T T Y
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYTHEVVTLWYR 170
Query: 402 DPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEMLD 454
PE +T DI+S G + +++T R S + + R + GT E++
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVW 228
Query: 455 PAVTDWPAEAAESFSKLAIQ 474
P VT P + SF K A Q
Sbjct: 229 PGVTSMP-DYKPSFPKWARQ 247
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 22/213 (10%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP----VAIKVLRPDAAQGKR-QFQQEVEVLSSIRH 283
D F + ++G G G V+ K+ H P +A K++ + R Q +E++VL
Sbjct: 33 DDFEKISELGAGNGGVVF--KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 90
Query: 284 PNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P +V GA G + E+M GSL+ L + G IP + K++ + L +L
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYL 147
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
+ ++HRD+KP+NIL++ K+ D G++ + S+A+S GT Y+
Sbjct: 148 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--------GTRSYM 197
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE Q + +SDI+S G+ L+++ R P+
Sbjct: 198 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 121/260 (46%), Gaps = 29/260 (11%)
Query: 229 DKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIRHP 284
+ F + KIGEG YG VY R KL VA+K +R D +G +E+ +L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 285 NMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALLFL 341
N+V LL + LV+E++H L+ + T + +P K + ++ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLAFC 119
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP N+L++ K++D GLAR A V T T Y
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYTHEVVTLWYR 170
Query: 402 DPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEMLD 454
PE +T DI+S G + +++T R S + + R + GT E++
Sbjct: 171 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVW 228
Query: 455 PAVTDWPAEAAESFSKLAIQ 474
P VT P + SF K A Q
Sbjct: 229 PGVTSMP-DYKPSFPKWARQ 247
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 121/260 (46%), Gaps = 29/260 (11%)
Query: 229 DKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIRHP 284
+ F + KIGEG YG VY R KL VA+K +R D +G +E+ +L + HP
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 285 NMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALLFL 341
N+V LL + LV+E++H L+ + T + +P K + ++ L F
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLAFC 123
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP N+L++ K++D GLAR A V T T Y
Sbjct: 124 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYTHEVVTLWYR 174
Query: 402 DPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEMLD 454
PE +T DI+S G + +++T R S + + R + GT E++
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVW 232
Query: 455 PAVTDWPAEAAESFSKLAIQ 474
P VT P + SF K A Q
Sbjct: 233 PGVTSMP-DYKPSFPKWARQ 251
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 22/213 (10%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP----VAIKVLRPDAAQGKR-QFQQEVEVLSSIRH 283
D F + ++G G G V+ K+ H P +A K++ + R Q +E++VL
Sbjct: 68 DDFEKISELGAGNGGVVF--KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 125
Query: 284 PNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P +V GA G + E+M GSL+ L + G IP + K++ + L +L
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYL 182
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
+ ++HRD+KP+NIL++ K+ D G++ + S+A+S GT Y+
Sbjct: 183 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--------GTRSYM 232
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE Q + +SDI+S G+ L+++ R P+
Sbjct: 233 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 121/260 (46%), Gaps = 29/260 (11%)
Query: 229 DKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIRHP 284
+ F + KIGEG YG VY R KL VA+K +R D +G +E+ +L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 285 NMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALLFL 341
N+V LL + LV+E++H L+ + T + +P K + ++ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLSFC 119
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP N+L++ K++D GLAR A V T T Y
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYTHEVVTLWYR 170
Query: 402 DPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEMLD 454
PE +T DI+S G + +++T R S + + R + GT E++
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVW 228
Query: 455 PAVTDWPAEAAESFSKLAIQ 474
P VT P + SF K A Q
Sbjct: 229 PGVTSMP-DYKPSFPKWARQ 247
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 124/286 (43%), Gaps = 29/286 (10%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYR------GKLDHT-PVAIKVLRPDA-AQGKRQFQQ 273
E+ E + +G G +G V GK D VA+K+L+ A A K
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 274 EVEVLSSI-RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPV-------IP 323
E++++S + +H N+V LLGAC G ++ EY G L + L R+ + +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 158
Query: 324 WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVA 383
R ++++A + FL + +HRD+ N+LL +V+KI D GLAR +
Sbjct: 159 LRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR----DIM 211
Query: 384 DSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRA 443
+ +A ++ PE + T +SD++S+GI+L +I + +GL +
Sbjct: 212 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGIL 267
Query: 444 IEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTV 489
+ + D PA A ++ + C L RP +
Sbjct: 268 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 313
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 236 KIGEGGYGPVYRGKLDHT--PVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMV----- 287
++G GG+G V R T VAIK R + + R+ + E++++ + HPN+V
Sbjct: 22 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 81
Query: 288 ---LLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQA 344
L A D L EY G L L + N + + ++I++AL +LH+
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 345 KPEPLVHRDLKPANILLD---RNYVSKISDVGLARLVPPSVADSVTQYHM-TSAAGTFCY 400
+ ++HRDLKP NI+L + + KI D+G A+ + Q + T GT Y
Sbjct: 142 R---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--------ELDQGELCTEFVGTLQY 190
Query: 401 IDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ PE + T D +SFG + + IT P
Sbjct: 191 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 22/218 (10%)
Query: 224 IEEATDKFSEAMKIGEGGYGPVYRGKLDHTP----VAIKVLRPDAAQGKR-QFQQEVEVL 278
+E D F + ++G G G V+ K+ H P +A K++ + R Q +E++VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVF--KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 279 SSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIAT 336
P +V GA G + E+M GSL+ L + G IP + K++ +
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIK 115
Query: 337 ALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
L +L + ++HRD+KP+NIL++ K+ D G++ + S+A+S G
Sbjct: 116 GLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--------G 165
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
T Y+ PE Q + +SDI+S G+ L+++ R P+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 99/214 (46%), Gaps = 26/214 (12%)
Query: 236 KIGEGGYGPVYRGKLDHT--PVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMV----- 287
++G GG+G V R T VAIK R + + R+ + E++++ + HPN+V
Sbjct: 21 RLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREV 80
Query: 288 ---LLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQA 344
L A D L EY G L L + N + + ++I++AL +LH+
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 345 KPEPLVHRDLKPANILLD---RNYVSKISDVGLARLVPPSVADSVTQYHM-TSAAGTFCY 400
+ ++HRDLKP NI+L + + KI D+G A+ + Q + T GT Y
Sbjct: 141 R---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAK--------ELDQGELCTEFVGTLQY 189
Query: 401 IDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ PE + T D +SFG + + IT P
Sbjct: 190 LAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 22/218 (10%)
Query: 224 IEEATDKFSEAMKIGEGGYGPVYRGKLDHTP----VAIKVLRPDAAQGKR-QFQQEVEVL 278
+E D F + ++G G G V+ K+ H P +A K++ + R Q +E++VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVF--KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 279 SSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIAT 336
P +V GA G + E+M GSL+ L + G IP + K++ +
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIK 115
Query: 337 ALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
L +L + ++HRD+KP+NIL++ K+ D G++ + S+A+S G
Sbjct: 116 GLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--------G 165
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
T Y+ PE Q + +SDI+S G+ L+++ R P+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 22/218 (10%)
Query: 224 IEEATDKFSEAMKIGEGGYGPVYRGKLDHTP----VAIKVLRPDAAQGKR-QFQQEVEVL 278
+E D F + ++G G G V+ K+ H P +A K++ + R Q +E++VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVF--KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 279 SSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIAT 336
P +V GA G + E+M GSL+ L + G IP + K++ +
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIK 115
Query: 337 ALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
L +L + ++HRD+KP+NIL++ K+ D G++ + S+A+S G
Sbjct: 116 GLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--------G 165
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
T Y+ PE Q + +SDI+S G+ L+++ R P+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 124/286 (43%), Gaps = 29/286 (10%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYR------GKLDHT-PVAIKVLRPDA-AQGKRQFQQ 273
E+ E + +G G +G V GK D VA+K+L+ A A K
Sbjct: 31 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 90
Query: 274 EVEVLSSI-RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPV-------IP 323
E++++S + +H N+V LLGAC G ++ EY G L + L R+ + +
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 150
Query: 324 WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVA 383
R ++++A + FL + +HRD+ N+LL +V+KI D GLAR +
Sbjct: 151 LRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR----DIM 203
Query: 384 DSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRA 443
+ +A ++ PE + T +SD++S+GI+L +I + +GL +
Sbjct: 204 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYPGIL 259
Query: 444 IEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTV 489
+ + D PA A ++ + C L RP +
Sbjct: 260 VNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 305
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 107/218 (49%), Gaps = 22/218 (10%)
Query: 224 IEEATDKFSEAMKIGEGGYGPVYRGKLDHTP----VAIKVLRPDAAQGKR-QFQQEVEVL 278
+E D F + ++G G G V+ K+ H P +A K++ + R Q +E++VL
Sbjct: 1 MELKDDDFEKISELGAGNGGVVF--KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL 58
Query: 279 SSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIAT 336
P +V GA G + E+M GSL+ L + G IP + K++ +
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIK 115
Query: 337 ALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
L +L + ++HRD+KP+NIL++ K+ D G++ + S+A+S G
Sbjct: 116 GLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--------G 165
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
T Y+ PE Q + +SDI+S G+ L+++ R P+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVE 276
+ EE KF ++G+G +G V Y D+T VA+K L+ + R F++E+E
Sbjct: 9 QFEERHLKF--LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 66
Query: 277 VLSSIRHPNMVLLLGACPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA 332
+L S++H N+V G C G L+ E++ GSL + L + I K + +
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKER--IDHIKLLQYTS 124
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
+I + +L + +HRDL NIL++ KI D GL +++P +
Sbjct: 125 QICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVLPQD--KEXXKVKEP 179
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ F Y PE + SD++SFG++L ++ T
Sbjct: 180 GESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 102/215 (47%), Gaps = 20/215 (9%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTPV--AIKVLRPDAAQ-GKRQFQQEVEVLSSIRHPN 285
D F K+G G +G V+ + + + IK + D +Q Q + E+EVL S+ HPN
Sbjct: 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN 81
Query: 286 MVLLLGACPDYG--CLVYEYMHNGSLEDRLLR-RGNTPVIPWRKRFKIAAEIATALLFLH 342
++ + DY +V E G L +R++ + + ++ ++ AL + H
Sbjct: 82 IIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH 141
Query: 343 QAKPEPLVHRDLKPANILLDRNYVS---KISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+ +VH+DLKP NIL KI D GLA L + H T+AAGT
Sbjct: 142 S---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK-------SDEHSTNAAGTAL 191
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + +T K DI+S G+++ ++T P
Sbjct: 192 YMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPF 225
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 35/221 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYRGK--LDHTPVAIKVLRPDAAQGK--RQFQQEVEVLSSIRHP 284
++++ +G+G +G V + K + A+KV+ +A+ K +EVE+L + HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 285 NMVLLLGACPDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRF------KIAAEIAT 336
N++ L D +V E G L D +++R KRF +I ++ +
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR---------KRFSEHDAARIIKQVFS 132
Query: 337 ALLFLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
+ ++H+ +VHRDLKP NILL +++ KI D GL+ + M
Sbjct: 133 GITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-------MKD 182
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
GT YI PE + G K D++S G++L +++ P
Sbjct: 183 RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI--RHPNMVLLLGA-C 293
IG+G +G V+RGK VA+K+ +++ +R + +E E+ ++ RH N++ + A
Sbjct: 17 IGKGRFGEVWRGKWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAADN 73
Query: 294 PDYGC-----LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH------ 342
D G LV +Y +GSL D L N + K+A A+ L LH
Sbjct: 74 KDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 129
Query: 343 QAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYID 402
Q KP + HRDLK NIL+ +N I+D+GLA V A GT Y+
Sbjct: 130 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 186
Query: 403 PEYQQTGMLT------TKSDIYSFGIMLLQIITARSPMGLTH 438
PE + ++DIY+ G++ + I R +G H
Sbjct: 187 PEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIH 227
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI--RHPNMVLLLGA-C 293
IG+G +G V+RGK VA+K+ +++ +R + +E E+ ++ RH N++ + A
Sbjct: 12 IGKGRFGEVWRGKWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAADN 68
Query: 294 PDYGC-----LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH------ 342
D G LV +Y +GSL D L N + K+A A+ L LH
Sbjct: 69 KDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 124
Query: 343 QAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYID 402
Q KP + HRDLK NIL+ +N I+D+GLA V A GT Y+
Sbjct: 125 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 181
Query: 403 PEYQQTGMLT------TKSDIYSFGIMLLQIITARSPMGLTH 438
PE + ++DIY+ G++ + I R +G H
Sbjct: 182 PEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIH 222
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI--RHPNMVLLLGA-C 293
IG+G +G V+RGK VA+K+ +++ +R + +E E+ ++ RH N++ + A
Sbjct: 11 IGKGRFGEVWRGKWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAADN 67
Query: 294 PDYGC-----LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH------ 342
D G LV +Y +GSL D L N + K+A A+ L LH
Sbjct: 68 KDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 123
Query: 343 QAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYID 402
Q KP + HRDLK NIL+ +N I+D+GLA V A GT Y+
Sbjct: 124 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 180
Query: 403 PEYQQTGMLT------TKSDIYSFGIMLLQIITARSPMGLTH 438
PE + ++DIY+ G++ + I R +G H
Sbjct: 181 PEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIH 221
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI--RHPNMVLLLGA-C 293
IG+G +G V+RGK VA+K+ +++ +R + +E E+ ++ RH N++ + A
Sbjct: 14 IGKGRFGEVWRGKWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAADN 70
Query: 294 PDYGC-----LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH------ 342
D G LV +Y +GSL D L N + K+A A+ L LH
Sbjct: 71 KDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 126
Query: 343 QAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYID 402
Q KP + HRDLK NIL+ +N I+D+GLA V A GT Y+
Sbjct: 127 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 183
Query: 403 PEYQQTGMLT------TKSDIYSFGIMLLQIITARSPMGLTH 438
PE + ++DIY+ G++ + I R +G H
Sbjct: 184 PEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIH 224
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 37/293 (12%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYR------GKLDHT-PVAIKVLRPDA-AQGKRQFQQ 273
E+ E + +G G +G V GK D VA+K+L+ A A K
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 274 EVEVLSSI-RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPW------ 324
E++++S + +H N+V LLGAC G ++ EY G L + LRR P + +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN-FLRRKRPPGLEYSYNPSH 157
Query: 325 --------RKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLAR 376
R ++++A + FL +HRD+ N+LL +V+KI D GLAR
Sbjct: 158 NPEEQLSSRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR 214
Query: 377 LVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGL 436
+ + +A ++ PE + T +SD++S+GI+L +I + +GL
Sbjct: 215 ----DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGL 266
Query: 437 THHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTV 489
+ + + D PA A ++ + C L RP +
Sbjct: 267 NPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 319
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/260 (30%), Positives = 121/260 (46%), Gaps = 29/260 (11%)
Query: 229 DKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIRHP 284
+ F + KIGEG YG VY R KL VA+K +R D +G +E+ +L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 285 NMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALLFL 341
N+V LL + LV+E++H L+ + T + +P K + ++ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQ-DLKTFMDASALTGIPLPLIKSYLF--QLLQGLAFC 118
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP N+L++ K++D GLAR A V T T Y
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYTHEVVTLWYR 169
Query: 402 DPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEMLD 454
PE +T DI+S G + +++T R S + + R + GT E++
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVW 227
Query: 455 PAVTDWPAEAAESFSKLAIQ 474
P VT P + SF K A Q
Sbjct: 228 PGVTSMP-DYKPSFPKWARQ 246
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 35/228 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKL---------DHTPVAIKVLRPDAAQGK-RQFQQEVEVL 278
DK + +GEG +G V + + VA+K+L+ DA + E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRGNTPVI 322
I +H N++ LLGAC G L + EY G+L + L + R +
Sbjct: 95 KMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
++ ++A + +L K +HRDL N+L+ N V KI+D GLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI---- 207
Query: 383 ADSVTQYHMTSAAGT-FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+++ Y T+ ++ PE + T +SD++SFG+++ +I T
Sbjct: 208 -NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLA 117
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 168
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 226
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 227 VWPGVTSMP-DYKPSFPKWARQ 247
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 131/295 (44%), Gaps = 43/295 (14%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQG-KRQFQQEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLA 117
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 168
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 226
Query: 453 LDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKDLGRKLESN 507
+ P VT P + SF K A R D V+ P L + GR L S
Sbjct: 227 VWPGVTSMP-DYKPSFPKWA----------RQDFSKVVPP----LDEDGRSLLSQ 266
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI--RHPNMVLLLGA-C 293
IG+G +G V+RGK VA+K+ +++ +R + +E E+ ++ RH N++ + A
Sbjct: 37 IGKGRFGEVWRGKWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAADN 93
Query: 294 PDYGC-----LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH------ 342
D G LV +Y +GSL D L N + K+A A+ L LH
Sbjct: 94 KDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 149
Query: 343 QAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYID 402
Q KP + HRDLK NIL+ +N I+D+GLA V A GT Y+
Sbjct: 150 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 206
Query: 403 PEYQQTGMLT------TKSDIYSFGIMLLQIITARSPMGLTH 438
PE + ++DIY+ G++ + I R +G H
Sbjct: 207 PEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIH 247
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 103/229 (44%), Gaps = 28/229 (12%)
Query: 213 DVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGK-- 268
D+ R +TI D F +G+G +G VY R K H VA+KVL + +
Sbjct: 14 DILTRHFTI-------DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGV 66
Query: 269 -RQFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWR 325
Q ++E+E+ + + HPN++ L D L+ EY G L L + + +
Sbjct: 67 EHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK---SCTFDEQ 123
Query: 326 KRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADS 385
+ I E+A AL++ H K ++HRD+KP N+LL KI+D G + P
Sbjct: 124 RTATIMEELADALMYCHGKK---VIHRDIKPENLLLGLKGELKIADFGWSVHAP------ 174
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ GT Y+ PE + M K D++ G++ +++ P
Sbjct: 175 --SLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI--RHPNMVLLLGA-C 293
IG+G +G V+RGK VA+K+ +++ +R + +E E+ ++ RH N++ + A
Sbjct: 50 IGKGRFGEVWRGKWRGEEVAVKIF---SSREERSWFREAEIYQTVMLRHENILGFIAADN 106
Query: 294 PDYGC-----LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH------ 342
D G LV +Y +GSL D L N + K+A A+ L LH
Sbjct: 107 KDNGTWTQLWLVSDYHEHGSLFDYL----NRYTVTVEGMIKLALSTASGLAHLHMEIVGT 162
Query: 343 QAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYID 402
Q KP + HRDLK NIL+ +N I+D+GLA V A GT Y+
Sbjct: 163 QGKP-AIAHRDLKSKNILVKKNGTCCIADLGLA--VRHDSATDTIDIAPNHRVGTKRYMA 219
Query: 403 PEYQQTGMLT------TKSDIYSFGIMLLQIITARSPMGLTH 438
PE + ++DIY+ G++ + I R +G H
Sbjct: 220 PEVLDDSINMKHFESFKRADIYAMGLVFWE-IARRCSIGGIH 260
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLA 117
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 168
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 226
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 227 VWPGVTSMP-DYKPSFPKWARQ 247
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 298 CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPA 357
CLV M+ G L+ + G R F AAEI L LH+ E +V+RDLKP
Sbjct: 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVF-YAAEICCGLEDLHR---ERIVYRDLKPE 315
Query: 358 NILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDI 417
NILLD + +ISD+GLA VP + GT Y+ PE + T D
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPEGQT-------IKGRVGTVGYMAPEVVKNERYTFSPDW 368
Query: 418 YSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQ-CA 476
++ G +L ++I +SP + I++ E ++ V + P E +E FS A C+
Sbjct: 369 WALGCLLYEMIAGQSPF---QQRKKKIKR----EEVERLVKEVPEEYSERFSPQARSLCS 421
Query: 477 ELRKKD 482
+L KD
Sbjct: 422 QLLCKD 427
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLA 118
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 119 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 169
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 227
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 228 VWPGVTSMP-DYKPSFPKWARQ 248
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLA 118
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 119 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 169
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 227
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 228 VWPGVTSMP-DYKPSFPKWARQ 248
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLA 119
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 170
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 228
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 229 VWPGVTSMP-DYKPSFPKWARQ 249
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLA 120
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 171
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 229
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 230 VWPGVTSMP-DYKPSFPKWARQ 250
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLA 119
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 170
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 228
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 229 VWPGVTSMP-DYKPSFPKWARQ 249
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLA 120
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 171
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 229
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 230 VWPGVTSMP-DYKPSFPKWARQ 250
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLA 117
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 118 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 168
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 226
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 227 VWPGVTSMP-DYKPSFPKWARQ 247
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLA 119
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 120 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 170
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 228
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 229 VWPGVTSMP-DYKPSFPKWARQ 249
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 120/260 (46%), Gaps = 29/260 (11%)
Query: 229 DKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIRHP 284
+ F + KIGEG YG VY R KL VA+K +R D +G +E+ +L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 285 NMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALLFL 341
N+V LL + LV+E++H L+ + T + +P K + ++ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLAFC 118
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP N+L++ K++D GLAR A V T Y
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLWYR 169
Query: 402 DPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEMLD 454
PE +T DI+S G + +++T R S + + R + GT E++
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVW 227
Query: 455 PAVTDWPAEAAESFSKLAIQ 474
P VT P + SF K A Q
Sbjct: 228 PGVTSMP-DYKPSFPKWARQ 246
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 29/266 (10%)
Query: 235 MKIGEGGYGPV----YRGKLDHTPVAIKVLRPDAAQG-KRQFQQEVEVLSSIRHPNMVLL 289
+++G G +G V YR + VAIKVL+ + + +E +++ + +P +V L
Sbjct: 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 75
Query: 290 LGAC-PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
+G C + LV E G L L+ G IP ++ +++ + +L +
Sbjct: 76 IGVCQAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYLEEKN--- 130
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTF--CYIDPEYQ 406
VHRDL N+LL + +KISD GL++ + DS Y+ +AG + + PE
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKAL--GADDS---YYTARSAGKWPLKWYAPECI 185
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT-ARSPMGLTH--HVSRAIEKGTLAEMLDPAVTDWPAE 463
+++SD++S+G+ + + ++ + P V IE+G E P E
Sbjct: 186 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC--------PPE 237
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTV 489
L C + +DRPD TV
Sbjct: 238 CPPELYALMSDCWIYKWEDRPDFLTV 263
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 35/228 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKL---------DHTPVAIKVLRPDAAQGK-RQFQQEVEVL 278
DK + +GEG +G V + + VA+K+L+ DA + E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRGNTPVI 322
I +H N++ LLGAC G L + EY G+L + L + R +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
++ ++A + +L K +HRDL N+L+ N V KI+D GLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI---- 207
Query: 383 ADSVTQY-HMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+++ Y + T+ ++ PE + T +SD++SFG+++ +I T
Sbjct: 208 -NNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 298 CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPA 357
CLV M+ G L+ + G R F AAEI L LH+ E +V+RDLKP
Sbjct: 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVF-YAAEICCGLEDLHR---ERIVYRDLKPE 315
Query: 358 NILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDI 417
NILLD + +ISD+GLA VP + GT Y+ PE + T D
Sbjct: 316 NILLDDHGHIRISDLGLAVHVPEGQT-------IKGRVGTVGYMAPEVVKNERYTFSPDW 368
Query: 418 YSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQ-CA 476
++ G +L ++I +SP + I++ E ++ V + P E +E FS A C+
Sbjct: 369 WALGCLLYEMIAGQSPF---QQRKKKIKR----EEVERLVKEVPEEYSERFSPQARSLCS 421
Query: 477 ELRKKD 482
+L KD
Sbjct: 422 QLLCKD 427
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 123/290 (42%), Gaps = 33/290 (11%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYR------GKLDHT-PVAIKVLRPDA-AQGKRQFQQ 273
E+ E + +G G +G V GK D VA+K+L+ A A K
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 274 EVEVLSSI-RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNT----------- 319
E++++S + +H N+V LLGAC G ++ EY G L + L R+
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIAN 158
Query: 320 PVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVP 379
+ R ++++A + FL + +HRD+ N+LL +V+KI D GLAR
Sbjct: 159 STLSTRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR--- 212
Query: 380 PSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHH 439
+ + +A ++ PE + T +SD++S+GI+L +I + +GL +
Sbjct: 213 -DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPY 267
Query: 440 VSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTV 489
+ + D PA A ++ + C L RP +
Sbjct: 268 PGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 120/260 (46%), Gaps = 29/260 (11%)
Query: 229 DKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIRHP 284
+ F + KIGEG YG VY R KL VA+K +R D +G +E+ +L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 285 NMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALLFL 341
N+V LL + LV+E++H L+ + T + +P K + ++ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLAFC 118
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP N+L++ K++D GLAR A V T Y
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLWYR 169
Query: 402 DPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEMLD 454
PE +T DI+S G + +++T R S + + R + GT E++
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVW 227
Query: 455 PAVTDWPAEAAESFSKLAIQ 474
P VT P + SF K A Q
Sbjct: 228 PGVTSMP-DYKPSFPKWARQ 246
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 35/221 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYRGK--LDHTPVAIKVLRPDAAQGK--RQFQQEVEVLSSIRHP 284
++++ +G+G +G V + K + A+KV+ +A+ K +EVE+L + HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 285 NMVLLLGACPDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRF------KIAAEIAT 336
N++ L D +V E G L D +++R KRF +I ++ +
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR---------KRFSEHDAARIIKQVFS 132
Query: 337 ALLFLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
+ ++H+ +VHRDLKP NILL +++ KI D GL+ + M
Sbjct: 133 GITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-------MKD 182
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
GT YI PE + G K D++S G++L +++ P
Sbjct: 183 RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLF--QLLQGLA 120
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 171
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 229
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 230 VWPGVTSMP-DYKPSFPKWARQ 250
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 236 KIGEGGYGPVYRGKLDHTPVAIKVL--RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+ E G +++G+ + +KVL R + + R F +E L HPN++ +LGAC
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 294 PD----YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
+ L+ +M GSL + +L G V+ + K A ++A + FLH EPL
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYN-VLHEGTNFVVDQSQAVKFALDMARGMAFLHTL--EPL 133
Query: 350 VHRD-LKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
+ R L ++++D + ++I S+AD + ++ PE Q
Sbjct: 134 IPRHALNSRSVMIDEDMTARI-----------SMADVKFSFQSPGRMYAPAWVAPEALQK 182
Query: 409 GMLTTK---SDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAA 465
T +D++SF ++L +++T P ++ I E L P + P +
Sbjct: 183 KPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME--IGMKVALEGLRPTI---PPGIS 237
Query: 466 ESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKD 499
SKL C RP +IVP L +++D
Sbjct: 238 PHVSKLMKICMNEDPAKRPKFD-MIVPILEKMQD 270
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 109/252 (43%), Gaps = 30/252 (11%)
Query: 228 TDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQ---FQQEVEVLSSIR 282
+D++ K+G G YG V + KL AIK+++ + EV VL +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 62
Query: 283 HPNMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF 340
HPN++ L D LV E G L D ++ R + I ++ + +
Sbjct: 63 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD---AAVIMKQVLSGTTY 119
Query: 341 LHQAKPEPLVHRDLKPANILLD---RNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
LH+ +VHRDLKP N+LL+ R+ + KI D GL+ A M GT
Sbjct: 120 LHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLS-------AHFEVGGKMKERLGT 169
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMG--LTHHVSRAIEKGTLAEMLDP 455
YI PE + K D++S G++L ++ P G + + +EKG + DP
Sbjct: 170 AYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFS--FDP 226
Query: 456 AVTDWPAEAAES 467
DW + E+
Sbjct: 227 P--DWTQVSDEA 236
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++H L+ + T + +P K + ++ L
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLA 121
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 122 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 172
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 230
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 231 VWPGVTSMP-DYKPSFPKWARQ 251
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 120/260 (46%), Gaps = 29/260 (11%)
Query: 229 DKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQG-KRQFQQEVEVLSSIRHP 284
+ F + KIGEG YG VY R KL VA+ +R D +G +E+ +L + HP
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 285 NMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALLFL 341
N+V LL + LV+E++H L+ + T + +P K + ++ L F
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLAFC 119
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP N+L++ K++D GLAR A V T T Y
Sbjct: 120 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYTHEVVTLWYR 170
Query: 402 DPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEMLD 454
PE +T DI+S G + +++T R S + + R + GT E++
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVW 228
Query: 455 PAVTDWPAEAAESFSKLAIQ 474
P VT P + SF K A Q
Sbjct: 229 PGVTSMP-DYKPSFPKWARQ 247
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 120/260 (46%), Gaps = 29/260 (11%)
Query: 229 DKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQG-KRQFQQEVEVLSSIRHP 284
+ F + KIGEG YG VY R KL VA+ +R D +G +E+ +L + HP
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 285 NMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALLFL 341
N+V LL + LV+E++H L+ + T + +P K + ++ L F
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLAFC 118
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP N+L++ K++D GLAR A V T T Y
Sbjct: 119 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYTHEVVTLWYR 169
Query: 402 DPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEMLD 454
PE +T DI+S G + +++T R S + + R + GT E++
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVW 227
Query: 455 PAVTDWPAEAAESFSKLAIQ 474
P VT P + SF K A Q
Sbjct: 228 PGVTSMP-DYKPSFPKWARQ 246
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 40/210 (19%)
Query: 236 KIGEGGYGPV----YRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
++G G +G V +RG+ D VAIK+++ + + + +F +E +V+ ++ H +V L G
Sbjct: 15 ELGTGQFGVVKYGKWRGQYD---VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 292 AC----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK------IAAEIATALLFL 341
C P + ++ EYM NG L + L R RF+ + ++ A+ +L
Sbjct: 71 VCTKQRPIF--IITEYMANGCLLNYLREM--------RHRFQTQQLLEMCKDVCEAMEYL 120
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC-- 399
+ +HRDL N L++ V K+SD GL+R V + D T +S F
Sbjct: 121 ESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYT----SSVGSKFPVR 170
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ PE ++KSDI++FG+++ +I +
Sbjct: 171 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 35/221 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYRGK--LDHTPVAIKVLRPDAAQGK--RQFQQEVEVLSSIRHP 284
++++ +G+G +G V + K + A+KV+ +A+ K +EVE+L + HP
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHP 81
Query: 285 NMVLLLGACPDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRF------KIAAEIAT 336
N++ L D +V E G L D +++R KRF +I ++ +
Sbjct: 82 NIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR---------KRFSEHDAARIIKQVFS 132
Query: 337 ALLFLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
+ ++H+ +VHRDLKP NILL +++ KI D GL+ + M
Sbjct: 133 GITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-------MKD 182
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
GT YI PE + G K D++S G++L +++ P
Sbjct: 183 RIGTAYYIAPEVLR-GTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKR-QFQQEVEVLSSIRHPNMVLLLGAC 293
+G G + V + T VAIK + +A +GK + E+ VL I+HPN+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 294 PDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
G L+ + + G L DR++ +G R ++ ++ A+ +LH +VH
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKG---FYTERDASRLIFQVLDAVKYLHDLG---IVH 139
Query: 352 RDLKPANIL---LDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
RDLKP N+L LD + ISD GL+++ P +++A GT Y+ PE
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-------LSTACGTPGYVAPEVLAQ 192
Query: 409 GMLTTKSDIYSFGIMLLQIITARSPM 434
+ D +S G++ ++ P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 120/260 (46%), Gaps = 29/260 (11%)
Query: 229 DKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIRHP 284
+ F + KIGEG YG VY R KL VA+K +R D +G +E+ +L + HP
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 285 NMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALLFL 341
N+V LL + LV+E++H L+ + T + +P K + ++ L F
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLF--QLLQGLAFC 120
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP N+L++ K++D GLAR A V T Y
Sbjct: 121 HSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLWYR 171
Query: 402 DPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEMLD 454
PE +T DI+S G + +++T R S + + R + GT E++
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVW 229
Query: 455 PAVTDWPAEAAESFSKLAIQ 474
P VT P + SF K A Q
Sbjct: 230 PGVTSMP-DYKPSFPKWARQ 248
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 96/206 (46%), Gaps = 21/206 (10%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKR-QFQQEVEVLSSIRHPNMVLLLGAC 293
+G G + V + T VAIK + +A +GK + E+ VL I+HPN+V L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIY 85
Query: 294 PDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
G L+ + + G L DR++ +G R ++ ++ A+ +LH +VH
Sbjct: 86 ESGGHLYLIMQLVSGGELFDRIVEKG---FYTERDASRLIFQVLDAVKYLHDLG---IVH 139
Query: 352 RDLKPANIL---LDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
RDLKP N+L LD + ISD GL+++ P +++A GT Y+ PE
Sbjct: 140 RDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSV-------LSTACGTPGYVAPEVLAQ 192
Query: 409 GMLTTKSDIYSFGIMLLQIITARSPM 434
+ D +S G++ ++ P
Sbjct: 193 KPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 40/210 (19%)
Query: 236 KIGEGGYGPV----YRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
++G G +G V +RG+ D VAIK+++ + + + +F +E +V+ ++ H +V L G
Sbjct: 31 ELGTGQFGVVKYGKWRGQYD---VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 292 AC----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK------IAAEIATALLFL 341
C P + ++ EYM NG L + L R RF+ + ++ A+ +L
Sbjct: 87 VCTKQRPIF--IITEYMANGCLLNYLREM--------RHRFQTQQLLEMCKDVCEAMEYL 136
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC-- 399
+ +HRDL N L++ V K+SD GL+R V + D T +S F
Sbjct: 137 ESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYT----SSVGSKFPVR 186
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ PE ++KSDI++FG+++ +I +
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 89/186 (47%), Gaps = 19/186 (10%)
Query: 255 VAIKVLRPDAAQGKR-QFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLED 311
VAIK + +A +GK + E+ VL I+HPN+V L G L+ + + G L D
Sbjct: 46 VAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 312 RLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANIL---LDRNYVSK 368
R++ +G R ++ ++ A+ +LH +VHRDLKP N+L LD +
Sbjct: 106 RIVEKG---FYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIM 159
Query: 369 ISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQII 428
ISD GL+++ P +++A GT Y+ PE + D +S G++ ++
Sbjct: 160 ISDFGLSKMEDPGSV-------LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
Query: 429 TARSPM 434
P
Sbjct: 213 CGYPPF 218
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 35/228 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKL---------DHTPVAIKVLRPDAAQGK-RQFQQEVEVL 278
DK + +GEG +G V + + VA+K+L+ DA + E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRGNTPVI 322
I +H N++ LLGAC G L + EY G+L + L + R +
Sbjct: 95 KMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
++ ++A + +L K +HRDL N+L+ N V KI+D GLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI---- 207
Query: 383 ADSVTQYHMTSAAGT-FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+++ Y T+ ++ PE + T +SD++SFG+++ +I T
Sbjct: 208 -NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 40/210 (19%)
Query: 236 KIGEGGYGPV----YRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
++G G +G V +RG+ D VAIK+++ + + + +F +E +V+ ++ H +V L G
Sbjct: 22 ELGTGQFGVVKYGKWRGQYD---VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 77
Query: 292 AC----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK------IAAEIATALLFL 341
C P + ++ EYM NG L + L R RF+ + ++ A+ +L
Sbjct: 78 VCTKQRPIF--IITEYMANGCLLNYLREM--------RHRFQTQQLLEMCKDVCEAMEYL 127
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC-- 399
+ +HRDL N L++ V K+SD GL+R V + D T +S F
Sbjct: 128 ESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYT----SSVGSKFPVR 177
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ PE ++KSDI++FG+++ +I +
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 35/228 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKL---------DHTPVAIKVLRPDAAQGK-RQFQQEVEVL 278
DK + +GEG +G V + + VA+K+L+ DA + E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMM 94
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRGNTPVI 322
I +H N++ LLGAC G L + EY G+L + L + R +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
++ ++A + +L K +HRDL N+L+ N V KI+D GLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI---- 207
Query: 383 ADSVTQYHMTSAAGT-FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+++ Y T+ ++ PE + T +SD++SFG+++ +I T
Sbjct: 208 -NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 126/276 (45%), Gaps = 32/276 (11%)
Query: 226 EATDKFSEAMKIGEGGYGP--VYRGKLDHTPVAIKVLRPD--AAQGKRQFQQEVEVLSSI 281
++ +K+ KIGEG +G + + D IK + +++ + + ++EV VL+++
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM 80
Query: 282 RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-LRRG----NTPVIPWRKRFKIAAEI 334
+HPN+V + + G L V +Y G L R+ ++G ++ W +I
Sbjct: 81 KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDW------FVQI 134
Query: 335 ATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSA 394
AL +H K ++HRD+K NI L ++ ++ D G+AR++ +V + +
Sbjct: 135 CLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA------RAC 185
Query: 395 AGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLD 454
GT Y+ PE + KSDI++ G +L ++ T L H K + +++
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT------LKHAFEAGSMKNLVLKIIS 239
Query: 455 PAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ + L Q + +DRP + +++
Sbjct: 240 GSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 124/289 (42%), Gaps = 31/289 (10%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYR------GKLDHT-PVAIKVLRPDA-AQGKRQFQQ 273
E+ E + +G G +G V GK D VA+K+L+ A A K
Sbjct: 39 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 98
Query: 274 EVEVLSSI-RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKI 330
E++++S + +H N+V LLGAC G ++ EY G L + L R+ + V+ F I
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRK--SRVLETDPAFAI 156
Query: 331 AAEIATALLFLHQAK----------PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPP 380
A A+ LH + + +HRD+ N+LL +V+KI D GLAR
Sbjct: 157 ANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR---- 212
Query: 381 SVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV 440
+ + +A ++ PE + T +SD++S+GI+L +I + +GL +
Sbjct: 213 DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS----LGLNPYP 268
Query: 441 SRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTV 489
+ + D PA A ++ + C L RP +
Sbjct: 269 GILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 105/204 (51%), Gaps = 28/204 (13%)
Query: 236 KIGEGGYGPV----YRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
++G G +G V +RG+ D VAIK+++ + + + +F +E +V+ ++ H +V L G
Sbjct: 11 ELGTGQFGVVKYGKWRGQYD---VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 292 AC----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPE 347
C P + ++ EYM NG L + L R ++ ++ ++ A+ +L +
Sbjct: 67 VCTKQRPIF--IITEYMANGCLLNYL--REMRHRFQTQQLLEMCKDVCEAMEYLESKQ-- 120
Query: 348 PLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC--YIDPEY 405
+HRDL N L++ V K+SD GL+R V + D T +S F + PE
Sbjct: 121 -FLHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYT----SSVGSKFPVRWSPPEV 172
Query: 406 QQTGMLTTKSDIYSFGIMLLQIIT 429
++KSDI++FG+++ +I +
Sbjct: 173 LMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 40/210 (19%)
Query: 236 KIGEGGYGPV----YRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
++G G +G V +RG+ D VAIK+++ + + + +F +E +V+ ++ H +V L G
Sbjct: 16 ELGTGQFGVVKYGKWRGQYD---VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 292 AC----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK------IAAEIATALLFL 341
C P + ++ EYM NG L + L R RF+ + ++ A+ +L
Sbjct: 72 VCTKQRPIF--IITEYMANGCLLNYLREM--------RHRFQTQQLLEMCKDVCEAMEYL 121
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC-- 399
+ + +HRDL N L++ V K+SD GL+R V + D T +S F
Sbjct: 122 ---ESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYT----SSVGSKFPVR 171
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ PE ++KSDI++FG+++ +I +
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 54/252 (21%)
Query: 224 IEEATDKFSEAMK----IGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQFQQ---- 273
++ +T FS+ K +G+G +G V + K+ A+KV+ KRQ +Q
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI------SKRQVKQKTDK 70
Query: 274 -----EVEVLSSIRHPNMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK 326
EV++L + HPN++ L D Y LV E G L D ++ R K
Sbjct: 71 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR---------K 121
Query: 327 RF------KIAAEIATALLFLHQAKPEPLVHRDLKPANILLD---RNYVSKISDVGLARL 377
RF +I ++ + + ++H+ K +VHRDLKP N+LL+ ++ +I D GL+
Sbjct: 122 RFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLT 437
S M GT YI PE G K D++S G++L +++ P
Sbjct: 179 FEASKK-------MKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGA 230
Query: 438 --HHVSRAIEKG 447
+ + + +EKG
Sbjct: 231 NEYDILKKVEKG 242
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 54/252 (21%)
Query: 224 IEEATDKFSEAMK----IGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQFQQ---- 273
++ +T FS+ K +G+G +G V + K+ A+KV+ KRQ +Q
Sbjct: 40 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI------SKRQVKQKTDK 93
Query: 274 -----EVEVLSSIRHPNMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK 326
EV++L + HPN++ L D Y LV E G L D ++ R K
Sbjct: 94 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR---------K 144
Query: 327 RF------KIAAEIATALLFLHQAKPEPLVHRDLKPANILLD---RNYVSKISDVGLARL 377
RF +I ++ + + ++H+ K +VHRDLKP N+LL+ ++ +I D GL+
Sbjct: 145 RFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH 201
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLT 437
S M GT YI PE G K D++S G++L +++ P
Sbjct: 202 FEAS-------KKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGA 253
Query: 438 --HHVSRAIEKG 447
+ + + +EKG
Sbjct: 254 NEYDILKKVEKG 265
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 54/252 (21%)
Query: 224 IEEATDKFSEAMK----IGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQFQQ---- 273
++ +T FS+ K +G+G +G V + K+ A+KV+ KRQ +Q
Sbjct: 41 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI------SKRQVKQKTDK 94
Query: 274 -----EVEVLSSIRHPNMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK 326
EV++L + HPN++ L D Y LV E G L D ++ R K
Sbjct: 95 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR---------K 145
Query: 327 RF------KIAAEIATALLFLHQAKPEPLVHRDLKPANILLD---RNYVSKISDVGLARL 377
RF +I ++ + + ++H+ K +VHRDLKP N+LL+ ++ +I D GL+
Sbjct: 146 RFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH 202
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLT 437
S M GT YI PE G K D++S G++L +++ P
Sbjct: 203 FEAS-------KKMKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGA 254
Query: 438 --HHVSRAIEKG 447
+ + + +EKG
Sbjct: 255 NEYDILKKVEKG 266
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQG-KRQFQQEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++ + L+D + T + +P K + ++ L
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLF--QLLQGLA 119
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 120 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 170
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 228
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 229 VWPGVTSMP-DYKPSFPKWARQ 249
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 122/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++ + L+D + T + +P K + ++ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLF--QLLQGLA 120
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 121 FCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 171
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 229
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 230 VWPGVTSMP-DYKPSFPKWARQ 250
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 109/252 (43%), Gaps = 30/252 (11%)
Query: 228 TDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQ---FQQEVEVLSSIR 282
+D++ K+G G YG V + KL AIK+++ + EV VL +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD 79
Query: 283 HPNMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF 340
HPN++ L D LV E G L D ++ R + I ++ + +
Sbjct: 80 HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD---AAVIMKQVLSGTTY 136
Query: 341 LHQAKPEPLVHRDLKPANILLD---RNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
LH+ +VHRDLKP N+LL+ R+ + KI D GL+ A M GT
Sbjct: 137 LHK---HNIVHRDLKPENLLLESKSRDALIKIVDFGLS-------AHFEVGGKMKERLGT 186
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMG--LTHHVSRAIEKGTLAEMLDP 455
YI PE + K D++S G++L ++ P G + + +EKG + DP
Sbjct: 187 AYYIAPEVLRKKY-DEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFS--FDP 243
Query: 456 AVTDWPAEAAES 467
DW + E+
Sbjct: 244 P--DWTQVSDEA 253
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 40/210 (19%)
Query: 236 KIGEGGYGPV----YRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
++G G +G V +RG+ D VAIK+++ + + + +F +E +V+ ++ H +V L G
Sbjct: 31 ELGTGQFGVVKYGKWRGQYD---VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 292 AC----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK------IAAEIATALLFL 341
C P + ++ EYM NG L + L R RF+ + ++ A+ +L
Sbjct: 87 VCTKQRPIF--IITEYMANGCLLNYLREM--------RHRFQTQQLLEMCKDVCEAMEYL 136
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC-- 399
+ +HRDL N L++ V K+SD GL+R V + D T +S F
Sbjct: 137 ESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEET----SSVGSKFPVR 186
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ PE ++KSDI++FG+++ +I +
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 101/215 (46%), Gaps = 22/215 (10%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLR-PDAAQGKRQFQQEVEVLSSIRHPNMV 287
F++ +IG+G +G VY+G +HT VAIK++ +A QQE+ VLS P +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 288 LLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRF--KIAAEIATALLFLHQ 343
G+ L + EY+ GS D LL+ G P + + I EI L +LH
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALD-LLKPG-----PLEETYIATILREILKGLDYLHS 134
Query: 344 AKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDP 403
+ +HRD+K AN+LL K++D G+A + + TQ GT ++ P
Sbjct: 135 ERK---IHRDIKAANVLLSEQGDVKLADFGVAGQL------TDTQIKRNXFVGTPFWMAP 185
Query: 404 EYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTH 438
E + K+DI+S GI +++ P H
Sbjct: 186 EVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLH 220
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 124/300 (41%), Gaps = 45/300 (15%)
Query: 231 FSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQFQ---QEVEVLSSIRHPN 285
FS+ +IG G +G VY R + VAIK + Q ++Q +EV L +RHPN
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 286 MVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQ 343
+ G LV EY GS D LL P+ + +IAA AL L
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCL-GSASD-LLEVHKKPL----QEVEIAAVTHGALQGLAY 130
Query: 344 AKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDP 403
++HRD+K NILL + K+ D G A ++ P+ GT ++ P
Sbjct: 131 LHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----------NXFVGTPYWMAP 180
Query: 404 EY---QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDW 460
E G K D++S GI +++ + P+ + +S +A+ PA+
Sbjct: 181 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH---IAQNESPALQS- 236
Query: 461 PAEAAESFSKLAIQCAELRKKDRPDL--------------GTVIVPELNRLKDLGRKLES 506
+E F C + +DRP TVI+ + R KD R+L++
Sbjct: 237 -GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRELDN 295
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 126/296 (42%), Gaps = 44/296 (14%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ + +G G +G V +D T VA+K+L+ A + R
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWRK 326
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST-YLRSKRNEFVPYKD 135
Query: 327 RFK----------IAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLAR 376
+K + ++A + FL K +HRDL NILL V KI D GLAR
Sbjct: 136 LYKDFLTLEHLICYSFQVAKGMEFLASRK---XIHRDLAARNILLSEKNVVKICDFGLAR 192
Query: 377 LVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-- 433
+ A ++ PE + T +SD++SFG++L +I + SP
Sbjct: 193 ----DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 248
Query: 434 -MGLTHHVSRAIEKG--------TLAEMLDPAVTDWPAEAAE--SFSKLAIQCAEL 478
+ + R +++G T EM + W E ++ +FS+L L
Sbjct: 249 GVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 137/301 (45%), Gaps = 48/301 (15%)
Query: 236 KIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
++G+G +G V Y D+T VA+K L+ +R FQ+E+++L ++ +V
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 89
Query: 290 LGACPDYGC------LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQ 343
G YG LV EY+ +G L D L R + + + +++I + +L
Sbjct: 90 RGV--SYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLGS 145
Query: 344 AKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG---TFCY 400
+ VHRDL NIL++ KI+D GLA+L+P Y++ G F Y
Sbjct: 146 RR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLD-----KDYYVVREPGQSPIFWY 197
Query: 401 IDPEYQQTGMLTTKSDIYSFGIMLLQIIT----ARSP-------MGLTHHV---SRAIEK 446
PE + + +SD++SFG++L ++ T + SP MG V SR +E
Sbjct: 198 A-PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256
Query: 447 GTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKDLGRKLES 506
+ L PA PAE E L C +DRP + + P+L+ L R E+
Sbjct: 257 LEEGQRL-PAPPACPAEVHE----LMKLCWAPSPQDRPSF-SALGPQLDMLWSGSRGCET 310
Query: 507 N 507
+
Sbjct: 311 H 311
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 126/296 (42%), Gaps = 44/296 (14%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ + +G G +G V +D T VA+K+L+ A + R
Sbjct: 17 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 76
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWRK 326
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST-YLRSKRNEFVPYKD 135
Query: 327 RFK----------IAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLAR 376
+K + ++A + FL K +HRDL NILL V KI D GLAR
Sbjct: 136 LYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAARNILLSEKNVVKIXDFGLAR 192
Query: 377 LVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP-- 433
+ A ++ PE + T +SD++SFG++L +I + SP
Sbjct: 193 ----DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP 248
Query: 434 -MGLTHHVSRAIEKG--------TLAEMLDPAVTDWPAEAAE--SFSKLAIQCAEL 478
+ + R +++G T EM + W E ++ +FS+L L
Sbjct: 249 GVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 33/227 (14%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKL---------DHTPVAIKVLRPDAAQGK-RQFQQEVEVL 278
DK + +GEG +G V + + VA+K+L+ DA + E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRGNTPVI 322
I +H N++ LLGAC G L + EY G+L + L + R +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQM 154
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
++ ++A + +L K +HRDL N+L+ N V KI+D GLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR----DI 207
Query: 383 ADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ T+ ++ PE + T +SD++SFG+++ +I T
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 35/228 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKL---------DHTPVAIKVLRPDAAQGK-RQFQQEVEVL 278
DK + +GEG +G V + + VA+K+L+ DA + E+E++
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 83
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRGNTPVI 322
I +H N++ LLGAC G L + EY G+L + L + R +
Sbjct: 84 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 143
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
++ ++A + +L K +HRDL N+L+ N V KI+D GLAR +
Sbjct: 144 TFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI---- 196
Query: 383 ADSVTQYHMTSAAGT-FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+++ Y T+ ++ PE + T +SD++SFG+++ +I T
Sbjct: 197 -NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 99/226 (43%), Gaps = 36/226 (15%)
Query: 231 FSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIRHPNMV 287
F +G GG+G V+ + K+D AIK +R P+ + + +EV+ L+ + HP +V
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 66
Query: 288 LLLGACPDYGCL---------VYEYMHNGSLEDRLLRRGNTP-------VIPWRKR---F 328
A + VY Y ++ +L R+ N I R+R
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLY-----IQMQLCRKENLKDWMNGRCTIEERERSVCL 121
Query: 329 KIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQ 388
I +IA A+ FLH L+HRDLKP+NI + V K+ D GL + +
Sbjct: 122 HIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
Query: 389 YHM------TSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQII 428
M T GT Y+ PE + K DI+S G++L +++
Sbjct: 179 TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 35/228 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKL---------DHTPVAIKVLRPDAAQGK-RQFQQEVEVL 278
DK + +GEG +G V + + VA+K+L+ DA + E+E++
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 86
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRGNTPVI 322
I +H N++ LLGAC G L + EY G+L + L + R +
Sbjct: 87 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 146
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
++ ++A + +L K +HRDL N+L+ N V KI+D GLAR +
Sbjct: 147 TFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI---- 199
Query: 383 ADSVTQYHMTSAAGT-FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+++ Y T+ ++ PE + T +SD++SFG+++ +I T
Sbjct: 200 -NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 88/186 (47%), Gaps = 19/186 (10%)
Query: 255 VAIKVLRPDAAQGKR-QFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLED 311
VAIK + A +GK + E+ VL I+HPN+V L G L+ + + G L D
Sbjct: 46 VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 312 RLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANIL---LDRNYVSK 368
R++ +G R ++ ++ A+ +LH +VHRDLKP N+L LD +
Sbjct: 106 RIVEKG---FYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIM 159
Query: 369 ISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQII 428
ISD GL+++ P +++A GT Y+ PE + D +S G++ ++
Sbjct: 160 ISDFGLSKMEDPGSV-------LSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
Query: 429 TARSPM 434
P
Sbjct: 213 CGYPPF 218
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 103/227 (45%), Gaps = 33/227 (14%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKL---------DHTPVAIKVLRPDAAQGK-RQFQQEVEVL 278
DK + +GEG +G V + + VA+K+L+ DA + E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRGNTPVI 322
I +H N++ LLGAC G L + EY G+L + L + R +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
++ ++A + +L K +HRDL N+L+ N V KI+D GLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLAR----DI 207
Query: 383 ADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ T+ ++ PE + T +SD++SFG+++ +I T
Sbjct: 208 NNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 35/228 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKL---------DHTPVAIKVLRPDAAQGK-RQFQQEVEVL 278
DK + +GEG +G V + + VA+K+L+ DA + E+E++
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 140
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRGNTPVI 322
I +H N++ LLGAC G L + EY G+L + L + R +
Sbjct: 141 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 200
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
++ ++A + +L K +HRDL N+L+ N V KI+D GLAR +
Sbjct: 201 TFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI---- 253
Query: 383 ADSVTQYHMTSAAGT-FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+++ Y T+ ++ PE + T +SD++SFG+++ +I T
Sbjct: 254 -NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 106/228 (46%), Gaps = 35/228 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKL---------DHTPVAIKVLRPDAAQGK-RQFQQEVEVL 278
DK + +GEG +G V + + VA+K+L+ DA + E+E++
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 81
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRGNTPVI 322
I +H N++ LLGAC G L + EY G+L + L + R +
Sbjct: 82 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 141
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
++ ++A + +L K +HRDL N+L+ N V KI+D GLAR +
Sbjct: 142 TFKDLVSCTYQLARGMEYLASQK---CIHRDLTARNVLVTENNVMKIADFGLARDI---- 194
Query: 383 ADSVTQYHMTSAAGT-FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+++ Y T+ ++ PE + T +SD++SFG+++ +I T
Sbjct: 195 -NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 124/300 (41%), Gaps = 45/300 (15%)
Query: 231 FSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQFQ---QEVEVLSSIRHPN 285
FS+ +IG G +G VY R + VAIK + Q ++Q +EV L +RHPN
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 286 MVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQ 343
+ G LV EY GS D LL P+ + +IAA AL L
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCL-GSASD-LLEVHKKPL----QEVEIAAVTHGALQGLAY 169
Query: 344 AKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDP 403
++HRD+K NILL + K+ D G A ++ P+ GT ++ P
Sbjct: 170 LHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----------NXFVGTPYWMAP 219
Query: 404 EY---QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDW 460
E G K D++S GI +++ + P+ + +S +A+ PA+
Sbjct: 220 EVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH---IAQNESPALQS- 275
Query: 461 PAEAAESFSKLAIQCAELRKKDRPDL--------------GTVIVPELNRLKDLGRKLES 506
+E F C + +DRP TVI+ + R KD R+L++
Sbjct: 276 -GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRELDN 334
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 40/210 (19%)
Query: 236 KIGEGGYGPV----YRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
++G G +G V +RG+ D VAIK+++ + + + +F +E +V+ ++ H +V L G
Sbjct: 16 ELGTGQFGVVKYGKWRGQYD---VAIKMIK-EGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 292 AC----PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK------IAAEIATALLFL 341
C P + ++ EYM NG L + L R RF+ + ++ A+ +L
Sbjct: 72 VCTKQRPIF--IITEYMANGCLLNYLREM--------RHRFQTQQLLEMCKDVCEAMEYL 121
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC-- 399
+ +HRDL N L++ V K+SD GL+R V + D T +S F
Sbjct: 122 ESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYV---LDDEYT----SSRGSKFPVR 171
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+ PE ++KSDI++FG+++ +I +
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 129/298 (43%), Gaps = 48/298 (16%)
Query: 220 TIEEIEEATDKFSEAMK-IGEGGYGPVYRGKLDHTP-------VAIKVLRPDAA--QGKR 269
+I +++E K ++ +G G +G VY G++ P VA+K L P+ Q +
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDEL 79
Query: 270 QFQQEVEVLSSIRHPNMVLLLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP-- 323
F E ++S + H N+V +G + P + ++ E M G L+ L P P
Sbjct: 80 DFLMEALIISKLNHQNIVRCIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 324 --WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLV 378
+A +IA +L + +HRD+ N LL V+KI D G+AR +
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 194
Query: 379 PPSVADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGL 436
Y+ ++ PE G+ T+K+D +SFG++L +I + +G
Sbjct: 195 ------YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGY 244
Query: 437 THHVSRA----IEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ S++ +E T +DP P ++ QC + + +DRP+ ++
Sbjct: 245 MPYPSKSNQEVLEFVTSGGRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 297
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 35/228 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKL---------DHTPVAIKVLRPDAAQGK-RQFQQEVEVL 278
DK + +GEG +G V + + VA+K+L+ DA + E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRGNTPVI 322
I +H N++ LLGAC G L + EY G+L + L + R +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
++ ++A + +L K +HRDL N+L+ N V +I+D GLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMRIADFGLARDI---- 207
Query: 383 ADSVTQYHMTSAAGT-FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+++ Y T+ ++ PE + T +SD++SFG+++ +I T
Sbjct: 208 -NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 24/218 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQ---QEVEVLSSI 281
D F +G+G +G V ++ T A+KVL+ D + E +LS
Sbjct: 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLA 80
Query: 282 RHPNMVLLLGAC---PDYGCLVYEYMHNGSLEDRLL--RRGNTPVIPWRKRFKIAAEIAT 336
R+ + L C PD V E+++ G L + RR + R RF AAEI +
Sbjct: 81 RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA----RARF-YAAEIIS 135
Query: 337 ALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
AL+FLH +++RDLK N+LLD K++D G+ + + + VT + G
Sbjct: 136 ALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTT---ATFCG 186
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
T YI PE Q + D ++ G++L +++ +P
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 137/301 (45%), Gaps = 48/301 (15%)
Query: 236 KIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
++G+G +G V Y D+T VA+K L+ +R FQ+E+++L ++ +V
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 76
Query: 290 LGACPDYGC------LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQ 343
G YG LV EY+ +G L D L R + + + +++I + +L
Sbjct: 77 RGV--SYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLGS 132
Query: 344 AKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG---TFCY 400
+ VHRDL NIL++ KI+D GLA+L+P Y++ G F Y
Sbjct: 133 RR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLD-----KDYYVVREPGQSPIFWY 184
Query: 401 IDPEYQQTGMLTTKSDIYSFGIMLLQIIT----ARSP-------MGLTHHV---SRAIEK 446
PE + + +SD++SFG++L ++ T + SP MG V SR +E
Sbjct: 185 A-PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSRLLEL 243
Query: 447 GTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKDLGRKLES 506
+ L PA PAE E L C +DRP + + P+L+ L R E+
Sbjct: 244 LEEGQRL-PAPPACPAEVHE----LMKLCWAPSPQDRPSF-SALGPQLDMLWSGSRGCET 297
Query: 507 N 507
+
Sbjct: 298 H 298
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 96/205 (46%), Gaps = 25/205 (12%)
Query: 237 IGEGGYGPVYRGKLD------HTPVAIKVLRPDAA-QGKRQFQQEVEVLSSIRHPNMVLL 289
+G G +G VY+G PVAIKVLR + + + ++ E V++ + P + L
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRL 84
Query: 290 LGACPDYGC-LVYEYMHNGSLEDRLL----RRGNTPVIPWRKRFKIAAEIATALLFLHQA 344
LG C LV + M G L D + R G+ ++ W +IA + +L
Sbjct: 85 LGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYLEDV 138
Query: 345 KPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPE 404
+ LVHRDL N+L+ KI+D GLARL + T+YH ++ E
Sbjct: 139 R---LVHRDLAARNVLVKSPNHVKITDFGLARL----LDIDETEYHADGGKVPIKWMALE 191
Query: 405 YQQTGMLTTKSDIYSFGIMLLQIIT 429
T +SD++S+G+ + +++T
Sbjct: 192 SILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 47/280 (16%)
Query: 237 IGEGGYGPVYRGKLDHTP-------VAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+G G +G VY G++ P VA+K L P+ Q + F E ++S + H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDFLMEALIISKLNHQNIV 111
Query: 288 LLLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP----WRKRFKIAAEIATALL 339
+G + P + ++ E M G L+ L P P +A +IA
Sbjct: 112 RCIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 340 FLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
+L + +HRD+ N LL V+KI D G+AR + Y+
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI------YRASYYRKGGCA 220
Query: 397 TFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRA----IEKGTLA 450
++ PE G+ T+K+D +SFG++L +I + +G + S++ +E T
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTSG 276
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+DP P ++ QC + + +DRP+ ++
Sbjct: 277 GRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 311
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 24/225 (10%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLR-PDAAQGKRQFQQEVEVL 278
I + + F++ +IG+G +G V++G + T VAIK++ +A QQE+ VL
Sbjct: 16 NNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVL 75
Query: 279 SSIRHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA---E 333
S + G+ L + EY+ GS D LLR G P+ F+IA E
Sbjct: 76 SQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALD-LLRAG-----PF-DEFQIATMLKE 128
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
I L +LH K +HRD+K AN+LL K++D G+A + + TQ +
Sbjct: 129 ILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQL------TDTQIKRNT 179
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTH 438
GT ++ PE Q +K+DI+S GI +++ P H
Sbjct: 180 FVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMH 224
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 107/237 (45%), Gaps = 33/237 (13%)
Query: 215 RYRKYT--IEEIEEATDKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVL-------RPD 263
RY K I ++ + + IG G +G V R K A+K+L R D
Sbjct: 59 RYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSD 118
Query: 264 AAQGKRQFQQEVEVLSSIRHPNMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPV 321
+A F +E ++++ P +V L A D Y +V EYM G L + L+ + P
Sbjct: 119 SAF----FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPE 173
Query: 322 IPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
W K + AE+ AL +H L+HRD+KP N+LLD++ K++D G +
Sbjct: 174 -KWAKFY--TAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKM--- 224
Query: 382 VADSVTQYHMTSAAGTFCYIDPEYQQT----GMLTTKSDIYSFGIMLLQIITARSPM 434
D H +A GT YI PE ++ G + D +S G+ L +++ +P
Sbjct: 225 --DETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 47/280 (16%)
Query: 237 IGEGGYGPVYRGKLDHTP-------VAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+G G +G VY G++ P VA+K L P+ Q + F E ++S H N+V
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIV 123
Query: 288 LLLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP----WRKRFKIAAEIATALL 339
+G + P + ++ E M G L+ L P P +A +IA
Sbjct: 124 RCIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 181
Query: 340 FLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
+L + +HRD+ N LL V+KI D G+AR + Y+
Sbjct: 182 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI------YRASYYRKGGCA 232
Query: 397 TFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRA----IEKGTLA 450
++ PE G+ T+K+D +SFG++L +I + +G + S++ +E T
Sbjct: 233 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTSG 288
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+DP P ++ QC + + +DRP+ ++
Sbjct: 289 GRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 323
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 47/280 (16%)
Query: 237 IGEGGYGPVYRGKLDHTP-------VAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+G G +G VY G++ P VA+K L P+ Q + F E ++S H N+V
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIV 96
Query: 288 LLLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP----WRKRFKIAAEIATALL 339
+G + P + ++ E M G L+ L P P +A +IA
Sbjct: 97 RCIGVSLQSLPRF--ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 340 FLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
+L + +HRD+ N LL V+KI D G+AR + Y+
Sbjct: 155 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI------YRASYYRKGGCA 205
Query: 397 TFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRA----IEKGTLA 450
++ PE G+ T+K+D +SFG++L +I + +G + S++ +E T
Sbjct: 206 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTSG 261
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+DP P ++ QC + + +DRP+ ++
Sbjct: 262 GRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 296
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 47/280 (16%)
Query: 237 IGEGGYGPVYRGKLDHTP-------VAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+G G +G VY G++ P VA+K L P+ Q + F E ++S H N+V
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIV 113
Query: 288 LLLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP----WRKRFKIAAEIATALL 339
+G + P + ++ E M G L+ L P P +A +IA
Sbjct: 114 RCIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 171
Query: 340 FLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
+L + +HRD+ N LL V+KI D G+AR + Y+
Sbjct: 172 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI------YRASYYRKGGCA 222
Query: 397 TFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRA----IEKGTLA 450
++ PE G+ T+K+D +SFG++L +I + +G + S++ +E T
Sbjct: 223 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTSG 278
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+DP P ++ QC + + +DRP+ ++
Sbjct: 279 GRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 313
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 220 TIEEIEEATDKFSEAMK-IGEGGYGPVYRGKLDHTP-------VAIKVLRPDAA--QGKR 269
+I +++E K ++ +G G +G VY G++ P VA+K L P+ Q +
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDEL 78
Query: 270 QFQQEVEVLSSIRHPNMVLLLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP-- 323
F E ++S H N+V +G + P + ++ E M G L+ L P P
Sbjct: 79 DFLMEALIISKFNHQNIVRCIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSS 136
Query: 324 --WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLV 378
+A +IA +L + +HRD+ N LL V+KI D G+AR +
Sbjct: 137 LAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193
Query: 379 PPSVADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGL 436
Y+ ++ PE G+ T+K+D +SFG++L +I + +G
Sbjct: 194 ------YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGY 243
Query: 437 THHVSRA----IEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ S++ +E T +DP P ++ QC + + +DRP+ ++
Sbjct: 244 MPYPSKSNQEVLEFVTSGGRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 296
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 115/252 (45%), Gaps = 54/252 (21%)
Query: 224 IEEATDKFSEAMK----IGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQFQQ---- 273
++ +T FS+ K +G+G +G V + K+ A+KV+ KRQ +Q
Sbjct: 23 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI------SKRQVKQKTDK 76
Query: 274 -----EVEVLSSIRHPNMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK 326
EV++L + HPN++ L D Y LV E G L D ++ R K
Sbjct: 77 ESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR---------K 127
Query: 327 RF------KIAAEIATALLFLHQAKPEPLVHRDLKPANILLD---RNYVSKISDVGLARL 377
RF +I ++ + + ++H+ K +VHRDLKP N+LL+ ++ +I D GL+
Sbjct: 128 RFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH 184
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLT 437
S M GT YI PE G K D++S G++L +++ P
Sbjct: 185 FEASKK-------MKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGA 236
Query: 438 --HHVSRAIEKG 447
+ + + +EKG
Sbjct: 237 NEYDILKKVEKG 248
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 228 TDKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPN 285
+D F ++G G VYR K T P A+KVL+ K+ + E+ VL + HPN
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPN 109
Query: 286 MVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQ 343
++ L + P LV E + G L DR++ +G R +I A+ +LH+
Sbjct: 110 IIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE---RDAADAVKQILEAVAYLHE 166
Query: 344 AKPEPLVHRDLKPANILLDR---NYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCY 400
+VHRDLKP N+L + KI+D GL+++V V M + GT Y
Sbjct: 167 ---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL-------MKTVCGTPGY 216
Query: 401 IDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE + + D++S GI+ ++ P
Sbjct: 217 CAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 220 TIEEIEEATDKFSEAMK-IGEGGYGPVYRGKLDHTP-------VAIKVLRPDAA--QGKR 269
+I +++E K ++ +G G +G VY G++ P VA+K L P+ Q +
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDEL 85
Query: 270 QFQQEVEVLSSIRHPNMVLLLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP-- 323
F E ++S H N+V +G + P + ++ E M G L+ L P P
Sbjct: 86 DFLMEALIISKFNHQNIVRCIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSS 143
Query: 324 --WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLV 378
+A +IA +L + +HRD+ N LL V+KI D G+AR +
Sbjct: 144 LAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 200
Query: 379 PPSVADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGL 436
Y+ ++ PE G+ T+K+D +SFG++L +I + +G
Sbjct: 201 ------YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGY 250
Query: 437 THHVSRA----IEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ S++ +E T +DP P ++ QC + + +DRP+ ++
Sbjct: 251 MPYPSKSNQEVLEFVTSGGRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 303
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 47/280 (16%)
Query: 237 IGEGGYGPVYRGKLDHTP-------VAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+G G +G VY G++ P VA+K L P+ Q + F E ++S H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 288 LLLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP----WRKRFKIAAEIATALL 339
+G + P + ++ E M G L+ L P P +A +IA
Sbjct: 98 RCIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 340 FLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
+L + +HRD+ N LL V+KI D G+AR + Y+
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI------YRASYYRKGGCA 206
Query: 397 TFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRA----IEKGTLA 450
++ PE G+ T+K+D +SFG++L +I + +G + S++ +E T
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTSG 262
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+DP P ++ QC + + +DRP+ ++
Sbjct: 263 GRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 297
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 121/250 (48%), Gaps = 27/250 (10%)
Query: 227 ATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQ-QEVEVLSSIRH 283
++ +F + K+G G Y VY+G K VA+K ++ D+ +G +E+ ++ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 284 PNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRR--GNTPV---IPWRKRFKIAAEIAT 336
N+V L + LV+E+M N L+ + R GNTP + K F+ ++
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQ--WQLLQ 119
Query: 337 ALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
L F H+ K ++HRDLKP N+L+++ K+ D GLAR A + +S
Sbjct: 120 GLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLAR------AFGIPVNTFSSEVV 170
Query: 397 TFCYIDPE-YQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTH---HVSRAIE-KGTLAE 451
T Y P+ + +T DI+S G +L ++IT + T+ + + GT E
Sbjct: 171 TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNE 230
Query: 452 MLDPAVTDWP 461
L P+VT P
Sbjct: 231 SLWPSVTKLP 240
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 123/283 (43%), Gaps = 46/283 (16%)
Query: 237 IGEGGYGPVYRGK---LDHT----PVAIKVLRPDAAQGKRQ-FQQEVEVLSSI-RHPNMV 287
+G G +G V + T VA+K+L+ A +R+ E+++++ + H N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 288 LLLGAC----PDYGCLVYEYMHNGSL--------------------EDRLLRRGNTPVIP 323
LLGAC P Y L++EY G L + RL + V+
Sbjct: 113 NLLGACTLSGPIY--LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLT 170
Query: 324 WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVA 383
+ A ++A + FL + + VHRDL N+L+ V KI D GLAR + S +
Sbjct: 171 FEDLLCFAYQVAKGMEFL---EFKSCVHRDLAARNVLVTHGKVVKICDFGLARDI-MSDS 226
Query: 384 DSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRA 443
+ V + +A ++ PE G+ T KSD++S+GI+L +I + +G+ +
Sbjct: 227 NYVVR---GNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS----LGVNPYPGIP 279
Query: 444 IEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
++ + + D P A E + C + RP
Sbjct: 280 VDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSF 322
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 47/280 (16%)
Query: 237 IGEGGYGPVYRGKLDHTP-------VAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+G G +G VY G++ P VA+K L P+ Q + F E ++S H N+V
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIV 114
Query: 288 LLLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP----WRKRFKIAAEIATALL 339
+G + P + ++ E M G L+ L P P +A +IA
Sbjct: 115 RCIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 172
Query: 340 FLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
+L + +HRD+ N LL V+KI D G+AR + Y+
Sbjct: 173 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI------YRAGYYRKGGCA 223
Query: 397 TFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRA----IEKGTLA 450
++ PE G+ T+K+D +SFG++L +I + +G + S++ +E T
Sbjct: 224 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTSG 279
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+DP P ++ QC + + +DRP+ ++
Sbjct: 280 GRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 314
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 128/298 (42%), Gaps = 48/298 (16%)
Query: 220 TIEEIEEATDKFSEAMK-IGEGGYGPVYRGKLDHTP-------VAIKVLRPDAA--QGKR 269
+I +++E K ++ +G G +G VY G++ P VA+K L P+ Q +
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDEL 70
Query: 270 QFQQEVEVLSSIRHPNMVLLLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP-- 323
F E ++S H N+V +G + P + ++ E M G L+ L P P
Sbjct: 71 DFLMEALIISKFNHQNIVRCIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSS 128
Query: 324 --WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLV 378
+A +IA +L + +HRD+ N LL V+KI D G+AR +
Sbjct: 129 LAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 185
Query: 379 PPSVADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGL 436
Y+ ++ PE G+ T+K+D +SFG++L +I + +G
Sbjct: 186 ------YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGY 235
Query: 437 THHVSRA----IEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ S++ +E T +DP P ++ QC + + +DRP+ ++
Sbjct: 236 MPYPSKSNQEVLEFVTSGGRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 288
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 47/280 (16%)
Query: 237 IGEGGYGPVYRGKLDHTP-------VAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+G G +G VY G++ P VA+K L P+ Q + F E ++S H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIV 111
Query: 288 LLLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP----WRKRFKIAAEIATALL 339
+G + P + ++ E M G L+ L P P +A +IA
Sbjct: 112 RCIGVSLQSLPRF--ILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 340 FLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
+L + +HRD+ N LL V+KI D G+AR + Y+
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI------YRASYYRKGGCA 220
Query: 397 TFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRA----IEKGTLA 450
++ PE G+ T+K+D +SFG++L +I + +G + S++ +E T
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTSG 276
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+DP P ++ QC + + +DRP+ ++
Sbjct: 277 GRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 311
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 30/240 (12%)
Query: 207 TALANNDVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA 264
TALA ++ RK+TI D F +G+G +G VY R K + +A+KVL
Sbjct: 2 TALA--EMPKRKFTI-------DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ 52
Query: 265 AQGK---RQFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNT 319
+ + Q ++E+E+ S +RHPN++ + D L+ E+ G L L + G
Sbjct: 53 LEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR- 111
Query: 320 PVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVP 379
++ E+A AL + H+ K ++HRD+KP N+L+ KI+D G + P
Sbjct: 112 --FDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAP 166
Query: 380 PSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHH 439
S+ + M GT Y+ PE + K D++ G++ + + P H
Sbjct: 167 -----SLRRRXM---CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 218
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 122/296 (41%), Gaps = 42/296 (14%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYR------GKLDHT-PVAIKVLRPDA-AQGKRQFQQ 273
E+ E + +G G +G V GK D VA+K+L+ A A K
Sbjct: 24 EKWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMS 83
Query: 274 EVEVLSSI-RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIP------- 323
E++++S + +H N+V LLGAC G ++ EY G L + L R+ + P
Sbjct: 84 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQD 143
Query: 324 -------------WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKIS 370
R ++++A + FL +HRD+ N+LL +V+KI
Sbjct: 144 PEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIG 200
Query: 371 DVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITA 430
D GLAR + + +A ++ PE + T +SD++S+GI+L +I +
Sbjct: 201 DFGLAR----DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS- 255
Query: 431 RSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
+GL + + + D PA A ++ + C L RP
Sbjct: 256 ---LGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTF 308
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 30/240 (12%)
Query: 207 TALANNDVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA 264
TALA ++ RK+TI D F +G+G +G VY R K + +A+KVL
Sbjct: 1 TALA--EMPKRKFTI-------DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ 51
Query: 265 AQGK---RQFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNT 319
+ + Q ++E+E+ S +RHPN++ + D L+ E+ G L L + G
Sbjct: 52 LEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR- 110
Query: 320 PVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVP 379
++ E+A AL + H+ K ++HRD+KP N+L+ KI+D G + P
Sbjct: 111 --FDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAP 165
Query: 380 PSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHH 439
S+ + M GT Y+ PE + K D++ G++ + + P H
Sbjct: 166 -----SLRRRXM---CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 217
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 122/275 (44%), Gaps = 37/275 (13%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP----VAIKVLRPDAAQGKR-QFQQEVEVLSSIRH 283
D F + ++G G G V+ K+ H P +A K++ + R Q +E++VL
Sbjct: 9 DDFEKISELGAGNGGVVF--KVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNS 66
Query: 284 PNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P +V GA G + E+M GSL+ L + G IP + K++ + L +L
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR---IPEQILGKVSIAVIKGLTYL 123
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
+ ++HRD+KP+NIL++ K+ D G++ + +A+ GT Y+
Sbjct: 124 REK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMANEFV--------GTRSYM 173
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWP 461
PE Q + +SDI+S G+ L+++ R P + E+LD V + P
Sbjct: 174 SPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPR----------PPMAIFELLDYIVNEPP 223
Query: 462 AEAAESFSKLAIQ-----CAELRKKDRPDLGTVIV 491
+ + L Q C +R DL ++V
Sbjct: 224 PKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMV 258
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 119/280 (42%), Gaps = 47/280 (16%)
Query: 237 IGEGGYGPVYRGKLDHTP-------VAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+G G +G VY G++ P VA+K L P+ Q + F E ++S H N+V
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIV 137
Query: 288 LLLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP----WRKRFKIAAEIATALL 339
+G + P + ++ E M G L+ L P P +A +IA
Sbjct: 138 RCIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195
Query: 340 FLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
+L + +HRD+ N LL V+KI D G+AR + Y+
Sbjct: 196 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI------YRAGYYRKGGCA 246
Query: 397 TFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRA----IEKGTLA 450
++ PE G+ T+K+D +SFG++L +I + +G + S++ +E T
Sbjct: 247 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTSG 302
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+DP P ++ QC + + +DRP+ ++
Sbjct: 303 GRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 337
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 136/301 (45%), Gaps = 48/301 (15%)
Query: 236 KIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
++G+G +G V Y D+T VA+K L+ +R FQ+E+++L ++ +V
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 77
Query: 290 LGACPDYGC------LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQ 343
G YG LV EY+ +G L D L R + + + +++I + +L
Sbjct: 78 RGV--SYGPGRQSLRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLGS 133
Query: 344 AKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG---TFCY 400
+ VHRDL NIL++ KI+D GLA+L+P Y++ G F Y
Sbjct: 134 RR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLD-----KDYYVVREPGQSPIFWY 185
Query: 401 IDPEYQQTGMLTTKSDIYSFGIMLLQIIT----ARSP-------MGLTHHV---SRAIEK 446
PE + + +SD++SFG++L ++ T + SP MG V R +E
Sbjct: 186 A-PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLEL 244
Query: 447 GTLAEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKDLGRKLES 506
+ L PA PAE E L C +DRP + + P+L+ L R E+
Sbjct: 245 LEEGQRL-PAPPACPAEVHE----LMKLCWAPSPQDRPSF-SALGPQLDMLWSGSRGCET 298
Query: 507 N 507
+
Sbjct: 299 H 299
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 111/259 (42%), Gaps = 23/259 (8%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 283 HPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH 342
HPN+V LL L + H + + IP ++ L F H
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 343 QAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYID 402
+ ++HRDLKP N+L++ K++D GLAR A V T Y
Sbjct: 124 SHR---VLHRDLKPQNLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLWYRA 174
Query: 403 PE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEMLDP 455
PE +T DI+S G + +++T R S + + R + GT E++ P
Sbjct: 175 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEVVWP 232
Query: 456 AVTDWPAEAAESFSKLAIQ 474
VT P + SF K A Q
Sbjct: 233 GVTSMP-DYKPSFPKWARQ 250
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 29/266 (10%)
Query: 235 MKIGEGGYGPV----YRGKLDHTPVAIKVLRPDAAQG-KRQFQQEVEVLSSIRHPNMVLL 289
+++G G +G V YR + VAIKVL+ + + +E +++ + +P +V L
Sbjct: 342 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRL 401
Query: 290 LGAC-PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
+G C + LV E G L L+ G IP ++ +++ + +L +
Sbjct: 402 IGVCQAEALMLVMEMAGGGPLHKFLV--GKREEIPVSNVAELLHQVSMGMKYLEEKN--- 456
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC--YIDPEYQ 406
VHR+L N+LL + +KISD GL++ + DS Y+ +AG + + PE
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKAL--GADDS---YYTARSAGKWPLKWYAPECI 511
Query: 407 QTGMLTTKSDIYSFGIMLLQIIT-ARSPMGLTH--HVSRAIEKGTLAEMLDPAVTDWPAE 463
+++SD++S+G+ + + ++ + P V IE+G E P E
Sbjct: 512 NFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMEC--------PPE 563
Query: 464 AAESFSKLAIQCAELRKKDRPDLGTV 489
L C + +DRPD TV
Sbjct: 564 CPPELYALMSDCWIYKWEDRPDFLTV 589
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 237 IGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQEV---EVLSSIRHPNMVLLLG 291
+G+G +G V R K A+K+LR + K + V VL + RHP + L
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 75
Query: 292 ACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
A D C V EY + G L L R R RF AEI +AL +LH +
Sbjct: 76 AFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARF-YGAEIVSALEYLHS---RDV 129
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
V+RD+K N++LD++ KI+D GL + ++D T M + GT Y+ PE +
Sbjct: 130 VYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGAT---MKTFCGTPEYLAPEVLEDN 183
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
D + G+++ +++ R P
Sbjct: 184 DYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 30/240 (12%)
Query: 207 TALANNDVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA 264
TALA ++ RK+TI D F +G+G +G VY R K + +A+KVL
Sbjct: 1 TALA--EMPKRKFTI-------DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ 51
Query: 265 AQGK---RQFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNT 319
+ + Q ++E+E+ S +RHPN++ + D L+ E+ G L L + G
Sbjct: 52 LEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR- 110
Query: 320 PVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVP 379
++ E+A AL + H+ K ++HRD+KP N+L+ KI+D G + P
Sbjct: 111 --FDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAP 165
Query: 380 PSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHH 439
S+ + M GT Y+ PE + K D++ G++ + + P H
Sbjct: 166 -----SLRRRXM---CGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 217
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 37/229 (16%)
Query: 229 DKFSEAMKIGEGGYGPVYRGK---LDH------TPVAIKVLRPDAAQGK-RQFQQEVEVL 278
D+ +GEG +G V + LD T VA+K+L+ DA + E+E++
Sbjct: 17 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 76
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRR-----------GNTP--VI 322
I +H N++ LLGAC G L + EY G+L + L R + P +
Sbjct: 77 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 136
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
+ A ++A + +L K +HRDL N+L+ + V KI+D GLAR +
Sbjct: 137 SSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDI---- 189
Query: 383 ADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
Y+ + G ++ PE + T +SD++SFG++L +I T
Sbjct: 190 --HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 120/280 (42%), Gaps = 47/280 (16%)
Query: 237 IGEGGYGPVYRGKLDHTP-------VAIKVLRPD--AAQGKRQFQQEVEVLSSIRHPNMV 287
+G G +G VY G++ P VA+K L P+ + Q + F E ++S H N+V
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVYSEQDELDFLMEALIISKFNHQNIV 111
Query: 288 LLLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP----WRKRFKIAAEIATALL 339
+G + P + ++ E M G L+ L P P +A +IA
Sbjct: 112 RCIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 340 FLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
+L + +HRD+ N LL V+KI D G+AR + Y+
Sbjct: 170 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI------YRASYYRKGGCA 220
Query: 397 TFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRA----IEKGTLA 450
++ PE G+ T+K+D +SFG++L +I + +G + S++ +E T
Sbjct: 221 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTSG 276
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+DP P ++ QC + + +DRP+ ++
Sbjct: 277 GRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 311
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 126/279 (45%), Gaps = 35/279 (12%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP----VAIKVLRPDA-AQGKRQFQQEVE 276
+ E D M++G G YG V K+ H P +A+K +R +Q +++ +++
Sbjct: 44 QNFEVKADDLEPIMELGRGAYGVVE--KMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLD 101
Query: 277 V-LSSIRHPNMVLLLGACPDYG--CLVYEYMHNG--SLEDRLLRRGNTPVIPWRKRFKIA 331
+ + ++ P V GA G + E M +++ +G T IP KIA
Sbjct: 102 ISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQT--IPEDILGKIA 159
Query: 332 AEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHM 391
I AL LH ++HRD+KP+N+L++ K+ D G++ + SVA ++
Sbjct: 160 VSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTID---- 213
Query: 392 TSAAGTFCY-----IDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEK 446
AG Y I+PE Q G + KSDI+S GI ++++ R P + S
Sbjct: 214 ---AGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFP-----YDSWGTPF 264
Query: 447 GTLAEMLDPAVTDWPAEA-AESFSKLAIQCAELRKKDRP 484
L ++++ PA+ + F QC + K+RP
Sbjct: 265 QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERP 303
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 37/229 (16%)
Query: 229 DKFSEAMKIGEGGYGPVYRGK---LDH------TPVAIKVLRPDAAQGK-RQFQQEVEVL 278
D+ +GEG +G V + LD T VA+K+L+ DA + E+E++
Sbjct: 21 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 80
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRR-----------GNTP--VI 322
I +H N++ LLGAC G L + EY G+L + L R + P +
Sbjct: 81 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 140
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
+ A ++A + +L K +HRDL N+L+ + V KI+D GLAR +
Sbjct: 141 SSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDI---- 193
Query: 383 ADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
Y+ + G ++ PE + T +SD++SFG++L +I T
Sbjct: 194 --HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 39/230 (16%)
Query: 229 DKFSEAMKIGEGGYGPVYRGK---LDH------TPVAIKVLRPDAAQGK-RQFQQEVEVL 278
D+ +GEG +G V + LD T VA+K+L+ DA + E+E++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPW----------- 324
I +H N++ LLGAC G L + EY G+L + L R P + +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR-EPPGLEYSYNPSHNPEEQ 146
Query: 325 ---RKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
+ A ++A + +L K +HRDL N+L+ + V KI+D GLAR +
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDI--- 200
Query: 382 VADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
Y+ + G ++ PE + T +SD++SFG++L +I T
Sbjct: 201 ---HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 35/228 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKL---------DHTPVAIKVLRPDAAQGK-RQFQQEVEVL 278
DK + +GEG +G V + + VA+K+L+ DA + E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRGNTPVI 322
I +H N++ LLGAC G L + Y G+L + L + R +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
++ ++A + +L K +HRDL N+L+ N V KI+D GLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI---- 207
Query: 383 ADSVTQYHMTSAAGT-FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+++ Y T+ ++ PE + T +SD++SFG+++ +I T
Sbjct: 208 -NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 237 IGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQEV---EVLSSIRHPNMVLLLG 291
+G+G +G V R K A+K+LR + K + V VL + RHP + L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 292 ACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
A D C V EY + G L L R R RF AEI +AL +LH +
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARF-YGAEIVSALEYLHS---RDV 126
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
V+RD+K N++LD++ KI+D GL + ++D T M + GT Y+ PE +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGAT---MKTFCGTPEYLAPEVLEDN 180
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
D + G+++ +++ R P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 37/229 (16%)
Query: 229 DKFSEAMKIGEGGYGPVYRGK---LDH------TPVAIKVLRPDAAQGK-RQFQQEVEVL 278
D+ +GEG +G V + LD T VA+K+L+ DA + E+E++
Sbjct: 20 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 79
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRR-----------GNTP--VI 322
I +H N++ LLGAC G L + EY G+L + L R + P +
Sbjct: 80 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 139
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
+ A ++A + +L K +HRDL N+L+ + V KI+D GLAR +
Sbjct: 140 SSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDI---- 192
Query: 383 ADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
Y+ + G ++ PE + T +SD++SFG++L +I T
Sbjct: 193 --HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 23/209 (11%)
Query: 237 IGEGGYGPVYR---------GKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMV 287
+G+GGYG V++ GK+ V K + A+ + E +L ++HP +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 288 LLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L+ A G L+ EY+ G L +L R G + AEI+ AL LHQ
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQ-- 139
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ +++RDLKP NI+L+ K++D GL + S+ D + + GT Y+ PE
Sbjct: 140 -KGIIYRDLKPENIMLNHQGHVKLTDFGLCK---ESIHDGTVTH---TFCGTIEYMAPEI 192
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSPM 434
D +S G ++ ++T P
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 37/229 (16%)
Query: 229 DKFSEAMKIGEGGYGPVYRGK---LDH------TPVAIKVLRPDAAQGK-RQFQQEVEVL 278
D+ +GEG +G V + LD T VA+K+L+ DA + E+E++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRR-----------GNTP--VI 322
I +H N++ LLGAC G L + EY G+L + L R + P +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQL 147
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
+ A ++A + +L K +HRDL N+L+ + V KI+D GLAR +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDI---- 200
Query: 383 ADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
Y+ + G ++ PE + T +SD++SFG++L +I T
Sbjct: 201 --HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 37/229 (16%)
Query: 229 DKFSEAMKIGEGGYGPVYRGK---LDH------TPVAIKVLRPDAAQGK-RQFQQEVEVL 278
D+ +GEG +G V + LD T VA+K+L+ DA + E+E++
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 72
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRR-----------GNTP--VI 322
I +H N++ LLGAC G L + EY G+L + L R + P +
Sbjct: 73 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 132
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
+ A ++A + +L K +HRDL N+L+ + V KI+D GLAR +
Sbjct: 133 SSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDI---- 185
Query: 383 ADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
Y+ + G ++ PE + T +SD++SFG++L +I T
Sbjct: 186 --HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 237 IGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQEV---EVLSSIRHPNMVLLLG 291
+G+G +G V R K A+K+LR + K + V VL + RHP + L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 292 ACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
A D C V EY + G L L R R RF AEI +AL +LH +
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARF-YGAEIVSALEYLHS---RDV 126
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
V+RD+K N++LD++ KI+D GL + ++D T M GT Y+ PE +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGAT---MKXFCGTPEYLAPEVLEDN 180
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
D + G+++ +++ R P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 95/205 (46%), Gaps = 19/205 (9%)
Query: 237 IGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQEV---EVLSSIRHPNMVLLLG 291
+G+G +G V R K A+K+LR + K + V VL + RHP + L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 292 ACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
A D C V EY + G L L R R RF AEI +AL +LH +
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARF-YGAEIVSALEYLHS---RDV 126
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
V+RD+K N++LD++ KI+D GL + ++D T M + GT Y+ PE +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGAT---MKTFCGTPEYLAPEVLEDN 180
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
D + G+++ +++ R P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 104/227 (45%), Gaps = 38/227 (16%)
Query: 231 FSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
F E +G+G +G V R LD AIK +R + EV +L+S+ H +V
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 289 LLGACPDYGCLV---------------YEYMHNGSLEDRLLRRGNTPVIPWRKR---FKI 330
A + V EY NG+L D L+ N ++R +++
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYD-LIHSENLN----QQRDEYWRL 121
Query: 331 AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV----ADSV 386
+I AL ++H + ++HRDLKP NI +D + KI D GLA+ V S+ DS
Sbjct: 122 FRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 387 ----TQYHMTSAAGTFCYIDPE-YQQTGMLTTKSDIYSFGIMLLQII 428
+ ++TSA GT Y+ E TG K D+YS GI+ ++I
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 237 IGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQEV---EVLSSIRHPNMVLLLG 291
+G+G +G V R K A+K+LR + K + V VL + RHP + L
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 77
Query: 292 ACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
A D C V EY + G L L R R RF AEI +AL +LH +
Sbjct: 78 AFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARF-YGAEIVSALEYLHS---RDV 131
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
V+RD+K N++LD++ KI+D GL + ++D T M GT Y+ PE +
Sbjct: 132 VYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGAT---MKXFCGTPEYLAPEVLEDN 185
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
D + G+++ +++ R P
Sbjct: 186 DYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 98/229 (42%), Gaps = 39/229 (17%)
Query: 224 IEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL---RPDAAQGKRQFQQEVEVL 278
I + FS IG GG+G VY + T A+K L R QG+ E +L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 279 SSIRHPNMVLLLGACPDYGCLVYEY------------MHNGSLEDRLLRRGNTPVIPWRK 326
S + G CP C+ Y + M+ G L L + G R
Sbjct: 244 SLVS-------TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 327 RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSV 386
AAEI L +H +V+RDLKPANILLD + +ISD+GL A
Sbjct: 297 ---YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGL--------ACDF 342
Query: 387 TQYHMTSAAGTFCYIDPEYQQTGM-LTTKSDIYSFGIMLLQIITARSPM 434
++ ++ GT Y+ PE Q G+ + +D +S G ML +++ SP
Sbjct: 343 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 23/209 (11%)
Query: 237 IGEGGYGPVYR---------GKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMV 287
+G+GGYG V++ GK+ V K + A+ + E +L ++HP +V
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 288 LLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L+ A G L+ EY+ G L +L R G + AEI+ AL LHQ
Sbjct: 85 DLIYAFQTGGKLYLILEYLSGGELFMQLEREG---IFMEDTACFYLAEISMALGHLHQ-- 139
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ +++RDLKP NI+L+ K++D GL + S+ D + GT Y+ PE
Sbjct: 140 -KGIIYRDLKPENIMLNHQGHVKLTDFGLCK---ESIHDGTVTHXF---CGTIEYMAPEI 192
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSPM 434
D +S G ++ ++T P
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 106/229 (46%), Gaps = 37/229 (16%)
Query: 229 DKFSEAMKIGEGGYGPVYRGK---LDH------TPVAIKVLRPDAAQGK-RQFQQEVEVL 278
D+ +GEG +G V + LD T VA+K+L+ DA + E+E++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRR-----------GNTP--VI 322
I +H N++ LLGAC G L + EY G+L + L R + P +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQL 147
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
+ A ++A + +L K +HRDL N+L+ + V KI+D GLAR +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDI---- 200
Query: 383 ADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
Y+ + G ++ PE + T +SD++SFG++L +I T
Sbjct: 201 --HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 35/228 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKL---------DHTPVAIKVLRPDAAQGK-RQFQQEVEVL 278
DK + +GEG +G V + + VA+K+L+ DA + E+E++
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMM 94
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRL-------------LRRGNTPVI 322
I +H N++ LLGAC G L + Y G+L + L + R +
Sbjct: 95 KMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
++ ++A + +L K +HRDL N+L+ N V KI+D GLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLVTENNVMKIADFGLARDI---- 207
Query: 383 ADSVTQYHMTSAAGT-FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+++ Y T+ ++ PE + T +SD++SFG+++ +I T
Sbjct: 208 -NNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 98/229 (42%), Gaps = 39/229 (17%)
Query: 224 IEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL---RPDAAQGKRQFQQEVEVL 278
I + FS IG GG+G VY + T A+K L R QG+ E +L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 279 SSIRHPNMVLLLGACPDYGCLVYEY------------MHNGSLEDRLLRRGNTPVIPWRK 326
S + G CP C+ Y + M+ G L L + G R
Sbjct: 244 SLVS-------TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 327 RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSV 386
AAEI L +H +V+RDLKPANILLD + +ISD+GL A
Sbjct: 297 ---YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGL--------ACDF 342
Query: 387 TQYHMTSAAGTFCYIDPEYQQTGM-LTTKSDIYSFGIMLLQIITARSPM 434
++ ++ GT Y+ PE Q G+ + +D +S G ML +++ SP
Sbjct: 343 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 98/229 (42%), Gaps = 39/229 (17%)
Query: 224 IEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL---RPDAAQGKRQFQQEVEVL 278
I + FS IG GG+G VY + T A+K L R QG+ E +L
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 279 SSIRHPNMVLLLGACPDYGCLVYEY------------MHNGSLEDRLLRRGNTPVIPWRK 326
S + G CP C+ Y + M+ G L L + G R
Sbjct: 244 SLVS-------TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 296
Query: 327 RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSV 386
AAEI L +H +V+RDLKPANILLD + +ISD+GL A
Sbjct: 297 ---YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGL--------ACDF 342
Query: 387 TQYHMTSAAGTFCYIDPEYQQTGM-LTTKSDIYSFGIMLLQIITARSPM 434
++ ++ GT Y+ PE Q G+ + +D +S G ML +++ SP
Sbjct: 343 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 391
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 227 ATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLR-PDAAQG-KRQFQQEVEVL---S 279
AT ++ +IG G YG VY+ + H+ VA+K +R P+ +G +EV +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 280 SIRHPNMVLLLGACPDY-------GCLVYEYMHNGSLEDRLLR----RGNTPVIPWRKRF 328
+ HPN+V L+ C LV+E++ D+ LR + P +P
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV------DQDLRTYLDKAPPPGLPAETIK 115
Query: 329 KIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQ 388
+ + L FLH +VHRDLKP NIL+ K++D GLAR+ Q
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY-------SYQ 165
Query: 389 YHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGT 448
+ T Y PE T D++S G + ++ R P+ + S A + G
Sbjct: 166 MALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGN--SEADQLGK 222
Query: 449 LAEMLD-PAVTDWPAEAA 465
+ +++ P DWP + +
Sbjct: 223 IFDLIGLPPEDDWPRDVS 240
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 34/212 (16%)
Query: 237 IGEGGYGPVY--RGKLDHTPVAIKV-----LRPDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
IG+G + V R L VAIK+ L P + Q + +EV ++ + HPN+V L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKL 76
Query: 290 LGACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPE 347
L + EY G + D L+ G R +F+ +I +A+ + HQ +
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQKR-- 131
Query: 348 PLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC----YIDP 403
+VHRDLK N+LLD + KI+D G + ++ + TFC Y P
Sbjct: 132 -IVHRDLKAENLLLDADMNIKIADFGFS-----------NEFTVGGKLDTFCGSPPYAAP 179
Query: 404 E-YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
E +Q + D++S G++L +++ P
Sbjct: 180 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 211
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 98/229 (42%), Gaps = 39/229 (17%)
Query: 224 IEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL---RPDAAQGKRQFQQEVEVL 278
I + FS IG GG+G VY + T A+K L R QG+ E +L
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 279 SSIRHPNMVLLLGACPDYGCLVYEY------------MHNGSLEDRLLRRGNTPVIPWRK 326
S + G CP C+ Y + M+ G L L + G R
Sbjct: 243 SLVS-------TGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRF 295
Query: 327 RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSV 386
AAEI L +H +V+RDLKPANILLD + +ISD+GL A
Sbjct: 296 ---YAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGL--------ACDF 341
Query: 387 TQYHMTSAAGTFCYIDPEYQQTGM-LTTKSDIYSFGIMLLQIITARSPM 434
++ ++ GT Y+ PE Q G+ + +D +S G ML +++ SP
Sbjct: 342 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPF 390
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++ + L+ + T + +P K + ++ L
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLF--QLLQGLA 118
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 119 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 169
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 227
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 228 VWPGVTSMP-DYKPSFPKWARQ 248
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 121/262 (46%), Gaps = 29/262 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDA-AQGKRQFQ-QEVEVLSSIR 282
+ + F + KIGEG YG VY R KL VA+K +R D +G +E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 283 HPNMVLLLGAC--PDYGCLVYEYMHNGSLEDRLLRRGNTPV-IPWRKRFKIAAEIATALL 339
HPN+V LL + LV+E++ + L+ + T + +P K + ++ L
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLF--QLLQGLA 120
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
F H + ++HRDLKP N+L++ K++D GLAR A V T
Sbjct: 121 FCHSHR---VLHRDLKPENLLINTEGAIKLADFGLAR------AFGVPVRTYXHEVVTLW 171
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITAR------SPMGLTHHVSRAIEKGTLAEM 452
Y PE +T DI+S G + +++T R S + + R + GT E+
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL--GTPDEV 229
Query: 453 LDPAVTDWPAEAAESFSKLAIQ 474
+ P VT P + SF K A Q
Sbjct: 230 VWPGVTSMP-DYKPSFPKWARQ 250
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 237 IGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQEV---EVLSSIRHPNMVLLLG 291
+G+G +G V R K A+K+LR + K + V VL + RHP + L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 292 ACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
A D C V EY + G L L R R RF AEI +AL +LH +
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARF-YGAEIVSALEYLHS---RDV 126
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
V+RD+K N++LD++ KI+D GL + ++D T M GT Y+ PE +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGAT---MKXFCGTPEYLAPEVLEDN 180
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
D + G+++ +++ R P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 119/280 (42%), Gaps = 47/280 (16%)
Query: 237 IGEGGYGPVYRGKLDHTP-------VAIKVLRPDAA--QGKRQFQQEVEVLSSIRHPNMV 287
+G G +G VY G++ P VA+K L P+ Q + F E ++S H N+V
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTL-PEVCSEQDELDFLMEALIISKFNHQNIV 97
Query: 288 LLLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP----WRKRFKIAAEIATALL 339
+G + P + ++ E M G L+ L P P +A +IA
Sbjct: 98 RCIGVSLQSLPRF--ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 340 FLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
+L + +HRD+ N LL V+KI D G+A+ + Y+
Sbjct: 156 YLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDI------YRASYYRKGGCA 206
Query: 397 TFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRA----IEKGTLA 450
++ PE G+ T+K+D +SFG++L +I + +G + S++ +E T
Sbjct: 207 MLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS----LGYMPYPSKSNQEVLEFVTSG 262
Query: 451 EMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+DP P ++ QC + + +DRP+ ++
Sbjct: 263 GRMDP-----PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 297
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 237 IGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQEV---EVLSSIRHPNMVLLLG 291
+G+G +G V R K A+K+LR + K + V VL + RHP + L
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKY 72
Query: 292 ACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
A D C V EY + G L L R R RF AEI +AL +LH +
Sbjct: 73 AFQTHDRLCFVMEYANGGELFFHLSR--ERVFTEERARF-YGAEIVSALEYLHS---RDV 126
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
V+RD+K N++LD++ KI+D GL + ++D T M GT Y+ PE +
Sbjct: 127 VYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGAT---MKXFCGTPEYLAPEVLEDN 180
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
D + G+++ +++ R P
Sbjct: 181 DYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 117/284 (41%), Gaps = 70/284 (24%)
Query: 211 NNDVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVL----RPDAAQ 266
+ND R+ K+ IE IG G + VY+G T V + R
Sbjct: 22 SNDGRFLKFDIE--------------IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS 67
Query: 267 GKRQFQQEVEVLSSIRHPNMVLLLGA----CPDYGC--LVYEYMHNGSLEDRLLRRGNTP 320
+++F++E E L ++HPN+V + C LV E +G+L+ L
Sbjct: 68 ERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYL------- 120
Query: 321 VIPWRKRFKI---------AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KIS 370
KRFK+ +I L FLH P P++HRDLK NI + S KI
Sbjct: 121 -----KRFKVXKIKVLRSWCRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIG 174
Query: 371 DVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPE-YQQTGMLTTKSDIYSFGIMLLQIIT 429
D+GLA L S A +V GT + PE Y++ D+Y+FG L+ T
Sbjct: 175 DLGLATLKRASFAKAVI--------GTPEFXAPEXYEEK--YDESVDVYAFGXCXLEXAT 224
Query: 430 ARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAESFSKLAI 473
+ P + ++ + T + PA SF K+AI
Sbjct: 225 SEYPYSECQNAAQIYRRVTSG--VKPA----------SFDKVAI 256
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 21/205 (10%)
Query: 237 IGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLL--LGA 292
+G G + V+ + +L A+K ++ A + E+ VL I+H N+V L +
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 293 CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHR 352
+ LV + + G L DR+L RG V + + ++ +A+ +LH+ +VHR
Sbjct: 77 STTHYYLVMQLVSGGELFDRILERG---VYTEKDASLVIQQVLSAVKYLHE---NGIVHR 130
Query: 353 DLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
DLKP N+L + N I+D GL+++ + M++A GT Y+ PE
Sbjct: 131 DLKPENLLYLTPEENSKIMITDFGLSKMEQNGI--------MSTACGTPGYVAPEVLAQK 182
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
+ D +S G++ ++ P
Sbjct: 183 PYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 227 ATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLR-PDAAQG-KRQFQQEVEVL---S 279
AT ++ +IG G YG VY+ + H+ VA+K +R P+ +G +EV +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 280 SIRHPNMVLLLGACPDY-------GCLVYEYMHNGSLEDRLLR----RGNTPVIPWRKRF 328
+ HPN+V L+ C LV+E++ D+ LR + P +P
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV------DQDLRTYLDKAPPPGLPAETIK 115
Query: 329 KIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQ 388
+ + L FLH +VHRDLKP NIL+ K++D GLAR+ Q
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY-------SYQ 165
Query: 389 YHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGT 448
+ T Y PE T D++S G + ++ R P+ + S A + G
Sbjct: 166 MALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGN--SEADQLGK 222
Query: 449 LAEMLD-PAVTDWPAEAA 465
+ +++ P DWP + +
Sbjct: 223 IFDLIGLPPEDDWPRDVS 240
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 33/227 (14%)
Query: 229 DKFSEAMKIGEGGYGPVYRGK---LDH------TPVAIKVLRPDAAQGK-RQFQQEVEVL 278
D+ +GEG +G V + LD T VA+K+L+ DA + E+E++
Sbjct: 28 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 87
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRR-----------GNTP--VI 322
I +H N++ LLGAC G L + EY G+L + L R + P +
Sbjct: 88 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQL 147
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
+ A ++A + +L K +HRDL N+L+ + V KI+D GLAR +
Sbjct: 148 SSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR----DI 200
Query: 383 ADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
T+ ++ PE + T +SD++SFG++L +I T
Sbjct: 201 HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 106/230 (46%), Gaps = 39/230 (16%)
Query: 229 DKFSEAMKIGEGGYGPVYRGK---LDH------TPVAIKVLRPDAAQGK-RQFQQEVEVL 278
D+ +GEG +G V + LD T VA+K+L+ DA + E+E++
Sbjct: 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMM 128
Query: 279 SSI-RHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPW----------- 324
I +H N++ LLGAC G L + EY G+L + L R P + +
Sbjct: 129 KMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAR-RPPGLEYSYNPSHNPEEQ 187
Query: 325 ---RKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
+ A ++A + +L K +HRDL N+L+ + V KI+D GLAR +
Sbjct: 188 LSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLARDI--- 241
Query: 382 VADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
Y+ + G ++ PE + T +SD++SFG++L +I T
Sbjct: 242 ---HHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
++F +G+G +G V K T A+K+L+ + K + E VL + RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 284 PNMVLLLGACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P + L + D C V EY + G L L R R RF AEI +AL +L
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR--ERVFSEDRARF-YGAEIVSALDYL 267
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H K +V+RDLK N++LD++ KI+D GL + + D T M + GT Y+
Sbjct: 268 HSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGAT---MKTFCGTPEYL 319
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE + D + G+++ +++ R P
Sbjct: 320 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 23/221 (10%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVLRPDAAQGKRQFQQEVEV 277
+I + + K++ KIG+G G VY T VAI+ + K E+ V
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 278 LSSIRHPNMVLLLGA--CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA--- 332
+ ++PN+V L + D +V EY+ GSL D + +IAA
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCR 123
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
E AL FLH + ++HRD+K NILL + K++D G + P Q +
Sbjct: 124 ECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE------QSKRS 174
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
+ GT ++ PE K DI+S GIM +++I P
Sbjct: 175 TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 114/258 (44%), Gaps = 38/258 (14%)
Query: 227 ATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLR-PDAAQG-KRQFQQEVEVL---S 279
AT ++ +IG G YG VY+ + H+ VA+K +R P+ +G +EV +L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 280 SIRHPNMVLLLGACPDY-------GCLVYEYMHNGSLEDRLLR----RGNTPVIPWRKRF 328
+ HPN+V L+ C LV+E++ D+ LR + P +P
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV------DQDLRTYLDKAPPPGLPAETIK 115
Query: 329 KIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQ 388
+ + L FLH +VHRDLKP NIL+ K++D GLAR+ Q
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY-------SYQ 165
Query: 389 YHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGT 448
+ T Y PE T D++S G + ++ R P+ + S A + G
Sbjct: 166 MALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGN--SEADQLGK 222
Query: 449 LAEMLD-PAVTDWPAEAA 465
+ +++ P DWP + +
Sbjct: 223 IFDLIGLPPEDDWPRDVS 240
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ +G G +G V +D T VA+K+L+ A + R
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRA 78
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWR- 325
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS-TYLRSKRNEFVPYKP 137
Query: 326 ----KRF-------KIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGL 374
K F + ++A + FL K +HRDL NILL V KI D GL
Sbjct: 138 EDLYKDFLTLEHLIXYSFQVAKGMEFLASRK---XIHRDLAARNILLSEKNVVKICDFGL 194
Query: 375 ARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP 433
AR + A ++ PE + T +SD++SFG++L +I + SP
Sbjct: 195 AR----DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 250
Query: 434 ---MGLTHHVSRAIEKG--------TLAEMLDPAVTDWPAEAAE--SFSKLAIQCAEL 478
+ + R +++G T EM + W E ++ +FS+L L
Sbjct: 251 YPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 18/213 (8%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
++F +G+G +G V K T A+K+L+ + K + E VL + RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 284 PNMVLLLGACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P + L + D C V EY + G L L R R RF AEI +AL +L
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR--ERVFSEDRARF-YGAEIVSALDYL 264
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H K +V+RDLK N++LD++ KI+D GL + + D T M + GT Y+
Sbjct: 265 HSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGAT---MKTFCGTPEYL 316
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE + D + G+++ +++ R P
Sbjct: 317 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 35/210 (16%)
Query: 240 GGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLS--SIRHPNMVLLLGA----- 292
G +G V++ +L + VA+K+ Q K+ +Q E EV S ++H N++ +GA
Sbjct: 35 GRFGCVWKAQLLNEYVAVKIF---PIQDKQSWQNEYEVYSLPGMKHENILQFIGAEKRGT 91
Query: 293 CPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKP----- 346
D L+ + GSL D L V+ W + IA +A L +LH+ P
Sbjct: 92 SVDVDLWLITAFHEKGSLSDFL----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDG 147
Query: 347 -EPLV-HRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPE 404
+P + HRD+K N+LL N + I+D GLA + S H GT Y+ PE
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTACIADFGLA--LKFEAGKSAGDTH--GQVGTRRYMAPE 203
Query: 405 -------YQQTGMLTTKSDIYSFGIMLLQI 427
+Q+ L + D+Y+ G++L ++
Sbjct: 204 VLEGAINFQRDAFL--RIDMYAMGLVLWEL 231
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 237 IGEGGYGPVYRGKLD------HTPVAIKVLRPDAAQGKRQFQQEVE---VLSSIRHPNMV 287
+G G +G V++G PV IKV+ + G++ FQ + + S+ H ++V
Sbjct: 39 LGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 288 LLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATALLFLH 342
LLG CP LV +Y+ GSL D + + G ++ W +IA + +L
Sbjct: 97 RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYLE 150
Query: 343 QAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYID 402
+ +VHR+L N+LL +++D G+A L+PP D Y + A ++
Sbjct: 151 EHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPD--DKQLLY--SEAKTPIKWMA 203
Query: 403 PEYQQTGMLTTKSDIYSFGIMLLQIIT 429
E G T +SD++S+G+ + +++T
Sbjct: 204 LESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 41/221 (18%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEV--LSSIRHPNMV-LLLG-- 291
IG G YG VY+G LD PVA+KV + ++ F E + + + H N+ ++G
Sbjct: 21 IGRGRYGAVYKGSLDERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 292 -----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
+Y LV EY NGSL L + W ++A + L +LH P
Sbjct: 78 RVTADGRMEY-LLVMEYYPNGSLXKYL----SLHTSDWVSSCRLAHSVTRGLAYLHTELP 132
Query: 347 -----EPLV-HRDLKPANILLDRNYVSKISDVGLA------RLVPPSVADSVTQYHMTSA 394
+P + HRDL N+L+ + ISD GL+ RLV P D+ S
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAA----ISE 188
Query: 395 AGTFCYIDPEYQQTGM-------LTTKSDIYSFGIMLLQII 428
GT Y+ PE + + + D+Y+ G++ +I
Sbjct: 189 VGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 22/213 (10%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP----VAIKVLRPDAAQGKR-QFQQEVEVLSSIRH 283
D F ++G G G V K+ H P +A K++ + R Q +E++VL
Sbjct: 16 DDFERISELGAGNGGVVT--KVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS 73
Query: 284 PNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P +V GA G + E+M GSL D++L+ IP K++ + L +L
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKR--IPEEILGKVSIAVLRGLAYL 130
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
+ ++HRD+KP+NIL++ K+ D G++ + S+A+S GT Y+
Sbjct: 131 REK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFV--------GTRSYM 180
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE Q + +SDI+S G+ L+++ R P+
Sbjct: 181 APERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 125/293 (42%), Gaps = 47/293 (16%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ + +G G +G V +D T VA+K+L+ A + R
Sbjct: 18 YDASKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 77
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWR- 325
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 78 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS-TYLRSKRNEFVPYKT 136
Query: 326 -----KRFKI-------AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVG 373
K F + ++A + FL K +HRDL NILL V KI D G
Sbjct: 137 PEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFG 193
Query: 374 LARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARS 432
LAR + A ++ PE + T +SD++SFG++L +I + S
Sbjct: 194 LAR----DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGAS 249
Query: 433 P---MGLTHHVSRAIEKG--------TLAEMLDPAVTDWPAEAAE--SFSKLA 472
P + + R +++G T EM + W E ++ +FS+L
Sbjct: 250 PYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 102/232 (43%), Gaps = 23/232 (9%)
Query: 209 LANNDVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVLRPDAAQ 266
+++ ++ + +I + + K++ KIG+G G VY T VAI+ +
Sbjct: 1 MSDEEILEKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP 60
Query: 267 GKRQFQQEVEVLSSIRHPNMVLLLGA--CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPW 324
K E+ V+ ++PN+V L + D +V EY+ GSL D +
Sbjct: 61 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-------C 113
Query: 325 RKRFKIAA---EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
+IAA E AL FLH + ++HRD+K NILL + K++D G + P
Sbjct: 114 MDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 170
Query: 382 VADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
Q + GT ++ PE K DI+S GIM +++I P
Sbjct: 171 ------QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 116/239 (48%), Gaps = 34/239 (14%)
Query: 215 RYRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKL-------DHTPVAIKVLRPDAAQG 267
++++ ++EI + +F E ++GE +G VY+G L VAIK L+ D A+G
Sbjct: 14 QHKQAKLKEISLSAVRFME--ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEG 70
Query: 268 --KRQFQQEVEVLSSIRHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRR------G 317
+ +F+ E + + ++HPN+V LLG L ++ Y +G L + L+ R G
Sbjct: 71 PLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVG 130
Query: 318 NT-------PVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKIS 370
+T + + A+IA + +L +VH+DL N+L+ KIS
Sbjct: 131 STDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKIS 187
Query: 371 DVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
D+GL R V AD + ++ ++ PE G + SDI+S+G++L ++ +
Sbjct: 188 DLGLFREV--YAADYYKL--LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 29/207 (14%)
Query: 237 IGEGGYGPVYRGKLD------HTPVAIKVLRPDAAQGKRQFQQEVE---VLSSIRHPNMV 287
+G G +G V++G PV IKV+ + G++ FQ + + S+ H ++V
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVI--EDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 288 LLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATALLFLH 342
LLG CP LV +Y+ GSL D + + G ++ W +IA + +L
Sbjct: 79 RLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYLE 132
Query: 343 QAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYID 402
+ +VHR+L N+LL +++D G+A L+PP D Y + A ++
Sbjct: 133 E---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPD--DKQLLY--SEAKTPIKWMA 185
Query: 403 PEYQQTGMLTTKSDIYSFGIMLLQIIT 429
E G T +SD++S+G+ + +++T
Sbjct: 186 LESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVLRPDAAQGKRQFQQEVEV 277
+I + + K++ KIG+G G VY T VAI+ + K E+ V
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 278 LSSIRHPNMVLLLGA--CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA--- 332
+ ++PN+V L + D +V EY+ GSL D + +IAA
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCR 123
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
E AL FLH + ++HRD+K NILL + K++D G + P Q +
Sbjct: 124 ECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE------QSKRS 174
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
GT ++ PE K DI+S GIM +++I P
Sbjct: 175 EMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 42/288 (14%)
Query: 236 KIGEGGYGPV----YRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
++G+G +G V Y D+T VA+K L+ +R FQ+E+++L ++ +V
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKY 73
Query: 290 LGACPDYGC------LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQ 343
G YG LV EY+ +G L D L R + + + +++I + +L
Sbjct: 74 RGV--SYGPGRPELRLVMEYLPSGCLRDFLQR--HRARLDASRLLLYSSQICKGMEYLGS 129
Query: 344 AKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDP 403
+ VHRDL NIL++ KI+D GLA+L+P V + S F Y P
Sbjct: 130 RR---CVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSP--IFWYA-P 183
Query: 404 EYQQTGMLTTKSDIYSFGIMLLQIIT----ARSP-------MGLTHHV---SRAIEKGTL 449
E + + +SD++SFG++L ++ T + SP MG V R +E
Sbjct: 184 ESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCRLLELLEE 243
Query: 450 AEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRL 497
+ L PA PAE E L C +DRP + + P+L+ L
Sbjct: 244 GQRL-PAPPACPAEVHE----LMKLCWAPSPQDRPSF-SALGPQLDML 285
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLR-PDAAQGKRQFQQEVEVLSSIRHPNMV 287
F++ KIG+G +G V++G + T VAIK++ +A QQE+ VLS P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 288 LLLGA-CPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
G+ D ++ EY+ GS D LL G + + I EI L +LH K
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGP---LDETQIATILREILKGLDYLHSEK 124
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+HRD+K AN+LL + K++D G+A + + TQ + GT ++ PE
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQL------TDTQIKRNTFVGTPFWMAPEV 175
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTH 438
+ +K+DI+S GI +++ P H
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPPHSELH 208
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVLRPDAAQGKRQFQQEVEV 277
+I + + K++ KIG+G G VY T VAI+ + K E+ V
Sbjct: 11 SIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 278 LSSIRHPNMVLLLGA--CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA--- 332
+ ++PN+V L + D +V EY+ GSL D + +IAA
Sbjct: 71 MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-------CMDEGQIAAVCR 123
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
E AL FLH + ++HRD+K NILL + K++D G + P Q +
Sbjct: 124 ECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE------QSKRS 174
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
GT ++ PE K DI+S GIM +++I P
Sbjct: 175 XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 112/252 (44%), Gaps = 54/252 (21%)
Query: 224 IEEATDKFSEAMK----IGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQFQQ---- 273
++ +T FS+ K +G+G +G V + K+ A+KV+ KRQ +Q
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVI------SKRQVKQKTDK 70
Query: 274 -----EVEVLSSIRHPNMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK 326
EV++L + HPN+ L D Y LV E G L D ++ R K
Sbjct: 71 ESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISR---------K 121
Query: 327 RF------KIAAEIATALLFLHQAKPEPLVHRDLKPANILLD---RNYVSKISDVGLARL 377
RF +I ++ + + + H+ K +VHRDLKP N+LL+ ++ +I D GL+
Sbjct: 122 RFSEVDAARIIRQVLSGITYXHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLT 437
S GT YI PE G K D++S G++L +++ P
Sbjct: 179 FEASKK-------XKDKIGTAYYIAPEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGA 230
Query: 438 --HHVSRAIEKG 447
+ + + +EKG
Sbjct: 231 NEYDILKKVEKG 242
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 127/294 (43%), Gaps = 48/294 (16%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ +G G +G V +D T VA+K+L+ A + R
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWR- 325
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST-YLRSKRNEFVPYKV 126
Query: 326 ------KRFKI-------AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDV 372
K F + ++A + FL K +HRDL NILL V KI D
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDF 183
Query: 373 GLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-AR 431
GLAR + D V + A ++ PE + T +SD++SFG++L +I +
Sbjct: 184 GLARDIXKD-PDXVRK---GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 239
Query: 432 SP---MGLTHHVSRAIEKG--------TLAEMLDPAVTDWPAEAAE--SFSKLA 472
SP + + R +++G T EM + W E ++ +FS+L
Sbjct: 240 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 114/261 (43%), Gaps = 41/261 (15%)
Query: 227 ATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLR-PDAAQGKRQFQ----QEVEVL- 278
AT ++ +IG G YG VY+ + H+ VA+K +R P+ G +EV +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 279 --SSIRHPNMVLLLGACPDY-------GCLVYEYMHNGSLEDRLLR----RGNTPVIPWR 325
+ HPN+V L+ C LV+E++ D+ LR + P +P
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV------DQDLRTYLDKAPPPGLPAE 120
Query: 326 KRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADS 385
+ + L FLH +VHRDLKP NIL+ K++D GLAR+
Sbjct: 121 TIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY------- 170
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIE 445
Q +T T Y PE T D++S G + ++ R P+ + S A +
Sbjct: 171 SYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPLFCGN--SEADQ 227
Query: 446 KGTLAEMLD-PAVTDWPAEAA 465
G + +++ P DWP + +
Sbjct: 228 LGKIFDLIGLPPEDDWPRDVS 248
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 34/212 (16%)
Query: 237 IGEGGYGPVY--RGKLDHTPVAIKV-----LRPDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
IG+G + V R L VA+K+ L P + Q + +EV ++ + HPN+V L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKL 79
Query: 290 LGACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPE 347
L V EY G + D L+ G R +F+ +I +A+ + HQ +
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQ---K 133
Query: 348 PLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC----YIDP 403
+VHRDLK N+LLD + KI+D G + ++ + + TFC Y P
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGFS-----------NEFTVGNKLDTFCGSPPYAAP 182
Query: 404 E-YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
E +Q + D++S G++L +++ P
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLR-PDAAQGKRQFQQEVEVLSSIRHPNMV 287
F++ KIG+G +G V++G + T VAIK++ +A QQE+ VLS P +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 288 LLLGA-CPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
G+ D ++ EY+ GS D LL G + + I EI L +LH K
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGP---LDETQIATILREILKGLDYLHSEK 139
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+HRD+K AN+LL + K++D G+A + + TQ GT ++ PE
Sbjct: 140 K---IHRDIKAANVLLSEHGEVKLADFGVAGQL------TDTQIKRNXFVGTPFWMAPEV 190
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTH 438
+ +K+DI+S GI +++ P H
Sbjct: 191 IKQSAYDSKADIWSLGITAIELARGEPPHSELH 223
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 124/294 (42%), Gaps = 48/294 (16%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ +G G +G V +D T VA+K+L+ A + R
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWR- 325
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST-YLRSKRNEFVPYKV 135
Query: 326 ------KRFKI-------AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDV 372
K F + ++A + FL K +HRDL NILL V KI D
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDF 192
Query: 373 GLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-AR 431
GLAR + A ++ PE + T +SD++SFG++L +I +
Sbjct: 193 GLAR----DIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248
Query: 432 SP---MGLTHHVSRAIEKG--------TLAEMLDPAVTDWPAEAAE--SFSKLA 472
SP + + R +++G T EM + W E ++ +FS+L
Sbjct: 249 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 127/294 (43%), Gaps = 48/294 (16%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ +G G +G V +D T VA+K+L+ A + R
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWR- 325
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLST-YLRSKRNEFVPYKV 126
Query: 326 ------KRFKI-------AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDV 372
K F + ++A + FL K +HRDL NILL V KI D
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDF 183
Query: 373 GLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-AR 431
GLAR + D V + A ++ PE + T +SD++SFG++L +I +
Sbjct: 184 GLARDIXKD-PDXVRK---GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 239
Query: 432 SP---MGLTHHVSRAIEKG--------TLAEMLDPAVTDWPAEAAE--SFSKLA 472
SP + + R +++G T EM + W E ++ +FS+L
Sbjct: 240 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 18/213 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLR-PDAAQGKRQFQQEVEVLSSIRHPNMV 287
F++ KIG+G +G V++G + T VAIK++ +A QQE+ VLS P +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 288 LLLGA-CPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
G+ D ++ EY+ GS D LL G + + I EI L +LH K
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGP---LDETQIATILREILKGLDYLHSEK 124
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+HRD+K AN+LL + K++D G+A + + TQ GT ++ PE
Sbjct: 125 K---IHRDIKAANVLLSEHGEVKLADFGVAGQL------TDTQIKRNXFVGTPFWMAPEV 175
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTH 438
+ +K+DI+S GI +++ P H
Sbjct: 176 IKQSAYDSKADIWSLGITAIELARGEPPHSELH 208
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 18/213 (8%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLR-PDAAQGKRQFQQEVEVLSSIRHPNMV 287
F++ KIG+G +G V++G + T VAIK++ +A QQE+ VLS P +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 288 LLLGA-CPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
G+ D ++ EY+ GS D LL G + + I EI L +LH K
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGSALD-LLEPGP---LDETQIATILREILKGLDYLHSEK 144
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+HRD+K AN+LL + K++D G+A + + TQ + GT ++ PE
Sbjct: 145 K---IHRDIKAANVLLSEHGEVKLADFGVAGQL------TDTQIKRNTFVGTPFWMAPEV 195
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTH 438
+ +K+DI+S GI +++ P H
Sbjct: 196 IKQSAYDSKADIWSLGITAIELARGEPPHSELH 228
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 34/280 (12%)
Query: 227 ATDKFSEAMKIGEGGYGPVYRG---KLDHTPVAIKVLRPDAAQGKRQFQQEVEV-----L 278
A ++ +IGEG YG V++ K VA+K +R + EV L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 279 SSIRHPNMVLLLGACP-------DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIA 331
+ HPN+V L C LV+E++ L + P +P +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT--YLDKVPEPGVPTETIKDMM 126
Query: 332 AEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHM 391
++ L FLH + +VHRDLKP NIL+ + K++D GLAR+ +A +
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-------L 176
Query: 392 TSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAE 451
TS T Y PE T D++S G + ++ R P L S + G + +
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKP--LFRGSSDVDQLGKILD 233
Query: 452 MLD-PAVTDWPAEAA---ESFSKLAIQCAELRKKDRPDLG 487
++ P DWP + A ++F + Q E D +LG
Sbjct: 234 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELG 273
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 25/228 (10%)
Query: 219 YTIEEIEEATD--KFSEAMKIGEGGYGPVY-----RGKLDHTPVAIKVLRPDAAQGKRQF 271
+ ++E E D +F +G+G +G V+ G A+KVL+ + + +
Sbjct: 12 HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 71
Query: 272 QQEVE--VLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKR 327
+ ++E +L + HP +V L A G L+ +++ G L RL + V+ +
Sbjct: 72 RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEED 127
Query: 328 FKI-AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSV 386
K AE+A AL LH +++RDLKP NILLD K++D GL++ S+
Sbjct: 128 VKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEK 181
Query: 387 TQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y S GT Y+ PE T +D +SFG+++ +++T P
Sbjct: 182 KAY---SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 237 IGEGGYGPVY-----RGKLDHTPVAIKVLRPDAAQGKRQFQQEVE--VLSSIRHPNMVLL 289
+G+G +G V+ G A+KVL+ + + + + ++E +L + HP +V L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 290 LGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKI-AAEIATALLFLHQAKP 346
A G L+ +++ G L RL + V+ + K AE+A AL LH
Sbjct: 92 HYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAELALALDHLHSLG- 146
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
+++RDLKP NILLD K++D GL++ S+ Y S GT Y+ PE
Sbjct: 147 --IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAY---SFCGTVEYMAPEVV 198
Query: 407 QTGMLTTKSDIYSFGIMLLQIITARSPM 434
T +D +SFG+++ +++T P
Sbjct: 199 NRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 131 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 183
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 218
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 108/228 (47%), Gaps = 25/228 (10%)
Query: 219 YTIEEIEEATD--KFSEAMKIGEGGYGPVY-----RGKLDHTPVAIKVLRPDAAQGKRQF 271
+ ++E E D +F +G+G +G V+ G A+KVL+ + + +
Sbjct: 13 HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 72
Query: 272 QQEVE--VLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKR 327
+ ++E +L + HP +V L A G L+ +++ G L RL + V+ +
Sbjct: 73 RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEED 128
Query: 328 FKI-AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSV 386
K AE+A AL LH +++RDLKP NILLD K++D GL++ S+
Sbjct: 129 VKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEK 182
Query: 387 TQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y S GT Y+ PE T +D +SFG+++ +++T P
Sbjct: 183 KAY---SFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 132 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 184
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 34/280 (12%)
Query: 227 ATDKFSEAMKIGEGGYGPVYRG---KLDHTPVAIKVLRPDAAQGKRQFQQEVEV-----L 278
A ++ +IGEG YG V++ K VA+K +R + EV L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 279 SSIRHPNMVLLLGACP-------DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIA 331
+ HPN+V L C LV+E++ L + P +P +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT--YLDKVPEPGVPTETIKDMM 126
Query: 332 AEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHM 391
++ L FLH + +VHRDLKP NIL+ + K++D GLAR+ +A +
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-------L 176
Query: 392 TSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAE 451
TS T Y PE T D++S G + ++ R P L S + G + +
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKP--LFRGSSDVDQLGKILD 233
Query: 452 MLD-PAVTDWPAEAA---ESFSKLAIQCAELRKKDRPDLG 487
++ P DWP + A ++F + Q E D +LG
Sbjct: 234 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELG 273
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 85
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 86 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 139
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 140 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 192
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 227
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 77 NPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 130
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 131 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 183
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 218
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 76 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 182
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 124/294 (42%), Gaps = 48/294 (16%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ +G G +G V +D T VA+K+L+ A + R
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWR- 325
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS-TYLRSKRNEFVPYKE 137
Query: 326 ------KRFKI-------AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDV 372
K F + ++A + FL K +HRDL NILL V KI D
Sbjct: 138 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDF 194
Query: 373 GLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-AR 431
GLAR + A ++ PE + T +SD++SFG++L +I +
Sbjct: 195 GLAR----DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 250
Query: 432 SP---MGLTHHVSRAIEKG--------TLAEMLDPAVTDWPAEAAE--SFSKLA 472
SP + + R +++G T EM + W E ++ +FS+L
Sbjct: 251 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 304
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 112/233 (48%), Gaps = 34/233 (14%)
Query: 221 IEEIEEATDKFSEAMKIGEGGYGPVYRGKL-------DHTPVAIKVLRPDAAQG--KRQF 271
++EI + +F E ++GE +G VY+G L VAIK L+ D A+G + +F
Sbjct: 3 LKEISLSAVRFME--ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLK-DKAEGPLREEF 59
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRR------GNT---- 319
+ E + + ++HPN+V LLG L ++ Y +G L + L+ R G+T
Sbjct: 60 RHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDR 119
Query: 320 ---PVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLAR 376
+ + A+IA + +L +VH+DL N+L+ KISD+GL R
Sbjct: 120 TVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFR 176
Query: 377 LVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
V AD + ++ ++ PE G + SDI+S+G++L ++ +
Sbjct: 177 EV--YAADYYKL--LGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 124/277 (44%), Gaps = 35/277 (12%)
Query: 224 IEEATDKFSEAMKIGEGGYGPVYRGKLDHTP----VAIKVLRPDA-AQGKRQFQQEVEV- 277
+E D M++G G YG V K+ H P +A+K +R +Q +++ ++++
Sbjct: 2 MEVKADDLEPIMELGRGAYGVV--EKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 59
Query: 278 LSSIRHPNMVLLLGACPDYG--CLVYEYMHNG--SLEDRLLRRGNTPVIPWRKRFKIAAE 333
+ ++ P V GA G + E M +++ +G T IP KIA
Sbjct: 60 MRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQT--IPEDILGKIAVS 117
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
I AL LH ++HRD+KP+N+L++ K+ D G++ + VA +
Sbjct: 118 IVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID------ 169
Query: 394 AAGTFCY-----IDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGT 448
AG Y I+PE Q G + KSDI+S GI ++++ R P + S
Sbjct: 170 -AGCKPYMAPERINPELNQKG-YSVKSDIWSLGITMIELAILRFP-----YDSWGTPFQQ 222
Query: 449 LAEMLDPAVTDWPAEA-AESFSKLAIQCAELRKKDRP 484
L ++++ PA+ + F QC + K+RP
Sbjct: 223 LKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERP 259
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 79 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 133 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 185
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 34/212 (16%)
Query: 237 IGEGGYGPVY--RGKLDHTPVAIKV-----LRPDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
IG+G + V R L VAIK+ L P + Q + +EV ++ + HPN+V L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQ---KLFREVRIMKILNHPNIVKL 79
Query: 290 LGACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPE 347
L + EY G + D L+ G R +F+ +I +A+ + HQ +
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QIVSAVQYCHQKR-- 134
Query: 348 PLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC----YIDP 403
+VHRDLK N+LLD + KI+D G + ++ + FC Y P
Sbjct: 135 -IVHRDLKAENLLLDADMNIKIADFGFS-----------NEFTVGGKLDAFCGAPPYAAP 182
Query: 404 E-YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
E +Q + D++S G++L +++ P
Sbjct: 183 ELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 134 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 186
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 221
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 124/294 (42%), Gaps = 48/294 (16%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ +G G +G V +D T VA+K+L+ A + R
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWR- 325
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS-TYLRSKRNEFVPYKV 135
Query: 326 ------KRFKI-------AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDV 372
K F + ++A + FL K +HRDL NILL V KI D
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDF 192
Query: 373 GLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-AR 431
GLAR + A ++ PE + T +SD++SFG++L +I +
Sbjct: 193 GLAR----DIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248
Query: 432 SP---MGLTHHVSRAIEKG--------TLAEMLDPAVTDWPAEAAE--SFSKLA 472
SP + + R +++G T EM + W E ++ +FS+L
Sbjct: 249 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 81
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 82 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 135
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 136 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 188
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 223
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 133 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 185
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 70 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 123
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 124 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 176
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 211
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 182
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
++F +G+G +G V K T A+K+L+ + K + E VL + RH
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 284 PNMVLLLGACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P + L + D C V EY + G L L R R RF AEI +AL +L
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR--ERVFSEDRARF-YGAEIVSALDYL 125
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H K +V+RDLK N++LD++ KI+D GL + + D T M GT Y+
Sbjct: 126 HSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGAT---MKXFCGTPEYL 177
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE + D + G+++ +++ R P
Sbjct: 178 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 132 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 184
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 17/213 (7%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRH 283
+ F +GEG + V + T AIK+L R + K + +E +V+S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 284 PNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P V L D L + Y NG L + + G+ R AEI +AL +L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRF---YTAEIVSALEYL 148
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP NILL+ + +I+D G A+++ P Q S GT Y+
Sbjct: 149 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP----ESKQARANSFVGTAQYV 201
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE + SD+++ G ++ Q++ P
Sbjct: 202 SPELLTEKSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 182
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
++F +G+G +G V K T A+K+L+ + K + E VL + RH
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 284 PNMVLLLGACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P + L + D C V EY + G L L R R RF AEI +AL +L
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR--ERVFSEDRARF-YGAEIVSALDYL 124
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H K +V+RDLK N++LD++ KI+D GL + + D T M GT Y+
Sbjct: 125 HSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGAT---MKXFCGTPEYL 176
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE + D + G+++ +++ R P
Sbjct: 177 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 237 IGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
IG+G + V R L VA+K++ + +++ ++ F+ EV ++ + HPN+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 292 ACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
L V EY G + D L+ G R +F+ +I +A+ + HQ + +
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQ---KFI 134
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC----YIDPE- 404
VHRDLK N+LLD + KI+D G + ++ + TFC Y PE
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS-----------NEFTFGNKLDTFCGSPPYAAPEL 183
Query: 405 YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+Q + D++S G++L +++ P
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 137 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 189
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 100
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 101 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 154
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 155 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 207
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 242
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 124/294 (42%), Gaps = 48/294 (16%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ +G G +G V +D T VA+K+L+ A + R
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWR- 325
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS-TYLRSKRNEFVPYKV 135
Query: 326 ------KRFKI-------AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDV 372
K F + ++A + FL K +HRDL NILL V KI D
Sbjct: 136 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDF 192
Query: 373 GLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-AR 431
GLAR + A ++ PE + T +SD++SFG++L +I +
Sbjct: 193 GLAR----DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 248
Query: 432 SP---MGLTHHVSRAIEKG--------TLAEMLDPAVTDWPAEAAE--SFSKLA 472
SP + + R +++G T EM + W E ++ +FS+L
Sbjct: 249 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 302
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 237 IGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
IG+G + V R L VA+K++ + +++ ++ F+ EV ++ + HPN+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 292 ACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
L V EY G + D L+ G R +F+ +I +A+ + HQ + +
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQ---KFI 134
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC----YIDPE- 404
VHRDLK N+LLD + KI+D G + ++ + TFC Y PE
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS-----------NEFTFGNKLDTFCGSPPYAAPEL 183
Query: 405 YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+Q + D++S G++L +++ P
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 133 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 185
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 182
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 79 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 132
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 133 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 185
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 220
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 97/213 (45%), Gaps = 18/213 (8%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
++F +G+G +G V K T A+K+L+ + K + E VL + RH
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 284 PNMVLLLGACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P + L + D C V EY + G L L R R RF AEI +AL +L
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSR--ERVFSEDRARF-YGAEIVSALDYL 126
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H K +V+RDLK N++LD++ KI+D GL + + D T M GT Y+
Sbjct: 127 HSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGAT---MKXFCGTPEYL 178
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE + D + G+++ +++ R P
Sbjct: 179 APEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 124/294 (42%), Gaps = 48/294 (16%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ +G G +G V +D T VA+K+L+ A + R
Sbjct: 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 113
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWR- 325
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 114 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST-YLRSKRNEFVPYKV 172
Query: 326 ------KRFKI-------AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDV 372
K F + ++A + FL K +HRDL NILL V KI D
Sbjct: 173 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDF 229
Query: 373 GLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-AR 431
GLAR + A ++ PE + T +SD++SFG++L +I +
Sbjct: 230 GLAR----DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 285
Query: 432 SP---MGLTHHVSRAIEKG--------TLAEMLDPAVTDWPAEAAE--SFSKLA 472
SP + + R +++G T EM + W E ++ +FS+L
Sbjct: 286 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 339
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 124/294 (42%), Gaps = 48/294 (16%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ +G G +G V +D T VA+K+L+ A + R
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWR- 325
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLST-YLRSKRNEFVPYKV 126
Query: 326 ------KRFKI-------AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDV 372
K F + ++A + FL K +HRDL NILL V KI D
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDF 183
Query: 373 GLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-AR 431
GLAR + A ++ PE + T +SD++SFG++L +I +
Sbjct: 184 GLAR----DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 239
Query: 432 SP---MGLTHHVSRAIEKG--------TLAEMLDPAVTDWPAEAAE--SFSKLA 472
SP + + R +++G T EM + W E ++ +FS+L
Sbjct: 240 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELV 293
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 117/280 (41%), Gaps = 34/280 (12%)
Query: 227 ATDKFSEAMKIGEGGYGPVYRG---KLDHTPVAIKVLRPDAAQGKRQFQQEVEV-----L 278
A ++ +IGEG YG V++ K VA+K +R + EV L
Sbjct: 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL 68
Query: 279 SSIRHPNMVLLLGACP-------DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIA 331
+ HPN+V L C LV+E++ L + P +P +
Sbjct: 69 ETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTT--YLDKVPEPGVPTETIKDMM 126
Query: 332 AEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHM 391
++ L FLH + +VHRDLKP NIL+ + K++D GLAR+ +A +
Sbjct: 127 FQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA-------L 176
Query: 392 TSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAE 451
TS T Y PE T D++S G + ++ R P L S + G + +
Sbjct: 177 TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKP--LFRGSSDVDQLGKILD 233
Query: 452 MLD-PAVTDWPAEAA---ESFSKLAIQCAELRKKDRPDLG 487
++ P DWP + A ++F + Q E D +LG
Sbjct: 234 VIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELG 273
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 125/300 (41%), Gaps = 48/300 (16%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ +G G +G V +D T VA+K+L+ A + R
Sbjct: 8 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 67
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWR- 325
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 68 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLST-YLRSKRNEFVPYKV 126
Query: 326 ------KRFKI-------AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDV 372
K F + ++A + FL K +HRDL NILL V KI D
Sbjct: 127 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDF 183
Query: 373 GLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-AR 431
GLAR + A ++ PE + T +SD++SFG++L +I +
Sbjct: 184 GLAR----DIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGA 239
Query: 432 SP---MGLTHHVSRAIEKG--------TLAEMLDPAVTDWPAEAAE--SFSKLAIQCAEL 478
SP + + R +++G T EM + W E ++ +FS+L L
Sbjct: 240 SPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRH 283
+ F +GEG + V + T AIK+L R + K + +E +V+S + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 284 PNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P V L D L + Y NG L + + G+ R AEI +AL +L
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYL 149
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP NILL+ + +I+D G A+++ P Q S GT Y+
Sbjct: 150 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP----ESKQARANSFVGTAQYV 202
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE SD+++ G ++ Q++ P
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 101/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 73 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEG 126
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 127 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 179
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 214
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 103/227 (45%), Gaps = 38/227 (16%)
Query: 231 FSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
F E +G+G +G V R LD AIK +R + EV +L+S+ H +V
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 289 LLGACPDYGCLV---------------YEYMHNGSLEDRLLRRGNTPVIPWRKR---FKI 330
A + V EY N +L D L+ N ++R +++
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYD-LIHSENLN----QQRDEYWRL 121
Query: 331 AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV----ADSV 386
+I AL ++H + ++HRDLKP NI +D + KI D GLA+ V S+ DS
Sbjct: 122 FRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 387 ----TQYHMTSAAGTFCYIDPE-YQQTGMLTTKSDIYSFGIMLLQII 428
+ ++TSA GT Y+ E TG K D+YS GI+ ++I
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 23/232 (9%)
Query: 209 LANNDVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVLRPDAAQ 266
+++ ++ + I + + K++ KIG+G G VY T VAI+ +
Sbjct: 1 MSDEEILEKLRIIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP 60
Query: 267 GKRQFQQEVEVLSSIRHPNMVLLLGA--CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPW 324
K E+ V+ ++PN+V L + D +V EY+ GSL D +
Sbjct: 61 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET-------C 113
Query: 325 RKRFKIAA---EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPS 381
+IAA E AL FLH + ++HR++K NILL + K++D G + P
Sbjct: 114 MDEGQIAAVCRECLQALEFLHSNQ---VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE 170
Query: 382 VADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
Q ++ GT ++ PE K DI+S GIM +++I P
Sbjct: 171 ------QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRHPNMVLLLG 291
+GEG + V + T AIK+L R + K + +E +V+S + HP V L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 292 ACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
D L + Y NG L + + G+ R AEI +AL +LH + +
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYLHG---KGI 150
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDLKP NILL+ + +I+D G A+++ P Q S GT Y+ PE
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESK----QARANSFVGTAQYVSPELLTEK 206
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
SD+++ G ++ Q++ P
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 118/273 (43%), Gaps = 45/273 (16%)
Query: 229 DKFSEAMKIGEGGYGPVYRG------KLDHT-PVAIKVLRPDAAQGKRQ-FQQEVEVLSS 280
++ S +G G +G V K D VA+K+L+P A +R+ E++VLS
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 281 I-RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRR-------GNTPVI-------- 322
+ H N+V LLGAC G ++ EY G L + L R+ +P I
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
+ ++A + FL +HRDL NILL ++KI D GLAR +
Sbjct: 159 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR----DI 211
Query: 383 ADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP---MGLTH 438
+ +A ++ PE + T +SD++S+GI L ++ + SP M +
Sbjct: 212 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 271
Query: 439 HVSRAIEKG--------TLAEMLDPAVTDWPAE 463
+ I++G AEM D T W A+
Sbjct: 272 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDAD 304
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 27/209 (12%)
Query: 237 IGEGGYGPVYRG--KLDHTPVAIKVL-----RPDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
+G G +G V G +L VA+K+L R GK ++E++ L RHP+++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK--IKREIQNLKLFRHPHIIKL 76
Query: 290 --LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPE 347
+ + P +V EY+ G L D + + G + R+ F+ +I +A+ + H+
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ---QILSAVDYCHR---H 130
Query: 348 PLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQ 407
+VHRDLKP N+LLD + +KI+D GL+ ++ S ++ + ++ G+ Y PE
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMM------SDGEF-LRTSCGSPNYAAPEV-I 182
Query: 408 TGMLTT--KSDIYSFGIMLLQIITARSPM 434
+G L + DI+S G++L ++ P
Sbjct: 183 SGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 118/273 (43%), Gaps = 45/273 (16%)
Query: 229 DKFSEAMKIGEGGYGPVYRG------KLDHT-PVAIKVLRPDAAQGKRQ-FQQEVEVLSS 280
++ S +G G +G V K D VA+K+L+P A +R+ E++VLS
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 281 I-RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRR-------GNTPVI-------- 322
+ H N+V LLGAC G ++ EY G L + L R+ +P I
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
+ ++A + FL +HRDL NILL ++KI D GLAR +
Sbjct: 161 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR----DI 213
Query: 383 ADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP---MGLTH 438
+ +A ++ PE + T +SD++S+GI L ++ + SP M +
Sbjct: 214 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 273
Query: 439 HVSRAIEKG--------TLAEMLDPAVTDWPAE 463
+ I++G AEM D T W A+
Sbjct: 274 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDAD 306
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 28/214 (13%)
Query: 227 ATDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPN 285
T FSE + E G ++ A+K + A +GK + E+ VL I+H N
Sbjct: 31 GTGAFSEVVLAEEKATGKLF---------AVKCIPKKALKGKESSIENEIAVLRKIKHEN 81
Query: 286 MVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQ 343
+V L + P++ LV + + G L DR++ +G + + ++ A+ +LH+
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKG---FYTEKDASTLIRQVLDAVYYLHR 138
Query: 344 AKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCY 400
+VHRDLKP N+L D ISD GL+++ M++A GT Y
Sbjct: 139 M---GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDV-------MSTACGTPGY 188
Query: 401 IDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ PE + D +S G++ ++ P
Sbjct: 189 VAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 237 IGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
IG+G + V R L VA++++ + +++ ++ F+ EV ++ + HPN+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 292 ACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
L V EY G + D L+ G R +F+ +I +A+ + HQ + +
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQ---KFI 134
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC----YIDPE- 404
VHRDLK N+LLD + KI+D G + ++ + TFC Y PE
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS-----------NEFTFGNKLDTFCGSPPYAAPEL 183
Query: 405 YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+Q + D++S G++L +++ P
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHT-PVAIKVLRPDAAQG--KRQFQQEVEVLSSIRHPN 285
+K+ + K+GEG YG VY+ K VA+K +R DA +E+ +L + HPN
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 286 MVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQ 343
+V L+ CL V+E+M ++L T + + + + ++ + HQ
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYLY-QLLRGVAHCHQ 137
Query: 344 AKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDP 403
+ ++HRDLKP N+L++ + K++D GLAR A + T T Y P
Sbjct: 138 HR---ILHRDLKPQNLLINSDGALKLADFGLAR------AFGIPVRSYTHEVVTLWYRAP 188
Query: 404 E-YQQTGMLTTKSDIYSFGIMLLQIITAR 431
+ + +T DI+S G + ++IT +
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 118/273 (43%), Gaps = 45/273 (16%)
Query: 229 DKFSEAMKIGEGGYGPVYRG------KLDHT-PVAIKVLRPDAAQGKRQ-FQQEVEVLSS 280
++ S +G G +G V K D VA+K+L+P A +R+ E++VLS
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 281 I-RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRR-------GNTPVI-------- 322
+ H N+V LLGAC G ++ EY G L + L R+ +P I
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
+ ++A + FL +HRDL NILL ++KI D GLAR +
Sbjct: 143 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR----DI 195
Query: 383 ADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP---MGLTH 438
+ +A ++ PE + T +SD++S+GI L ++ + SP M +
Sbjct: 196 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 255
Query: 439 HVSRAIEKG--------TLAEMLDPAVTDWPAE 463
+ I++G AEM D T W A+
Sbjct: 256 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDAD 288
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 236 KIGEGGYGPVYRGKLDHTPV--AIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
++G+G +G VY+ K T A KV+ + + + E+E+L++ HP +V LLGA
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 294 PDYGCL--VYEYMHNGSLEDRLLR--RGNT-PVIPWRKRFKIAAEIATALLFLHQAKPEP 348
G L + E+ G+++ +L RG T P I + ++ AL FLH +
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----VVCRQMLEALNFLHSKR--- 137
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
++HRDLK N+L+ +++D G+ S + T S GT ++ PE
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGV------SAKNLKTLQKRDSFIGTPYWMAPEVVMC 191
Query: 409 GMLTT-----KSDIYSFGIMLLQIITARSPMGLTHH 439
+ K+DI+S GI L+++ P HH
Sbjct: 192 ETMKDTPYDYKADIWSLGITLIEMAQIEPP----HH 223
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 17/213 (7%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRH 283
+ F +GEG + V + T AIK+L R + K + +E +V+S + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 284 PNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P V L D L + Y NG L + + G+ R AEI +AL +L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYL 146
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP NILL+ + +I+D G A+++ P Q + GT Y+
Sbjct: 147 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP----ESKQARANAFVGTAQYV 199
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE SD+++ G ++ Q++ P
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHT-PVAIKVLRPDAAQG--KRQFQQEVEVLSSIRHPN 285
+K+ + K+GEG YG VY+ K VA+K +R DA +E+ +L + HPN
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 286 MVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQ 343
+V L+ CL V+E+M ++L T + + + + ++ + HQ
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDL--KKVLDENKTGLQDSQIKIYLY-QLLRGVAHCHQ 137
Query: 344 AKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDP 403
+ ++HRDLKP N+L++ + K++D GLAR A + T T Y P
Sbjct: 138 HR---ILHRDLKPQNLLINSDGALKLADFGLAR------AFGIPVRSYTHEVVTLWYRAP 188
Query: 404 E-YQQTGMLTTKSDIYSFGIMLLQIITAR 431
+ + +T DI+S G + ++IT +
Sbjct: 189 DVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 24/251 (9%)
Query: 236 KIGEGGYGPVYRGKLDHTPV--AIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
++G+G +G VY+ + T V A KV+ + + + E+++L+S HPN+V LL A
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 294 --PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ ++ E+ G++ D ++ P+ + + + + AL +LH K ++H
Sbjct: 104 YYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQV-VCKQTLDALNYLHDNK---IIH 158
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGM- 410
RDLK NIL + K++D G+ S ++ T S GT ++ PE
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGV------SAKNTRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 411 ----LTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
K+D++S GI L+++ P HH + +P P+ +
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPP----HHELNPMRVLLKIAKSEPPTLAQPSRWSS 268
Query: 467 SFSKLAIQCAE 477
+F +C E
Sbjct: 269 NFKDFLKKCLE 279
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 99/228 (43%), Gaps = 62/228 (27%)
Query: 236 KIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI--RHPNMVLLLGA- 292
+IG+G YG V+ GK VA+KV + + +E E+ ++ RH N++ + A
Sbjct: 44 QIGKGRYGEVWMGKWRGEKVAVKVF---FTTEEASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 293 CPDYGC-----LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH----- 342
G L+ +Y NGSL D L + + + K+A + L LH
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYL----KSTTLDAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 343 -QAKPEPLVHRDLKPANILLDRNYVSKISDVGLA---------------------RLVPP 380
Q KP + HRDLK NIL+ +N I+D+GLA R +PP
Sbjct: 157 TQGKP-AIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 381 SVAD-SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQI 427
V D S+ + H S YI +D+YSFG++L ++
Sbjct: 216 EVLDESLNRNHFQS------YI------------MADMYSFGLILWEV 245
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 118/273 (43%), Gaps = 45/273 (16%)
Query: 229 DKFSEAMKIGEGGYGPVYRG------KLDHT-PVAIKVLRPDAAQGKRQ-FQQEVEVLSS 280
++ S +G G +G V K D VA+K+L+P A +R+ E++VLS
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 281 I-RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRR-------GNTPVI-------- 322
+ H N+V LLGAC G ++ EY G L + L R+ +P I
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
+ ++A + FL +HRDL NILL ++KI D GLAR +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR----DI 218
Query: 383 ADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP---MGLTH 438
+ +A ++ PE + T +SD++S+GI L ++ + SP M +
Sbjct: 219 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 278
Query: 439 HVSRAIEKG--------TLAEMLDPAVTDWPAE 463
+ I++G AEM D T W A+
Sbjct: 279 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDAD 311
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 99/210 (47%), Gaps = 30/210 (14%)
Query: 237 IGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
IG+G + V R L VA+K++ + +++ ++ F+ EV ++ + HPN+V L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 73
Query: 292 ACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
L V EY G + D L+ G R +F+ +I +A+ + HQ + +
Sbjct: 74 VIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR---QIVSAVQYCHQ---KFI 127
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC----YIDPE- 404
VHRDLK N+LLD + KI+D G + ++ + TFC Y PE
Sbjct: 128 VHRDLKAENLLLDADMNIKIADFGFS-----------NEFTFGNKLDTFCGSPPYAAPEL 176
Query: 405 YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+Q + D++S G++L +++ P
Sbjct: 177 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 38/214 (17%)
Query: 240 GGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSS--IRHPNMVLLLGACPDYG 297
G +G V++ +L + VA+K+ Q K+ +Q E E+ S+ ++H N++ + A G
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIF---PLQDKQSWQSEREIFSTPGMKHENLLQFIAA-EKRG 81
Query: 298 -------CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKP---- 346
L+ + GSL D L +GN +I W + +A ++ L +LH+ P
Sbjct: 82 SNLEVELWLITAFHDKGSLTDYL--KGN--IITWNELCHVAETMSRGLSYLHEDVPWCRG 137
Query: 347 ----EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYID 402
+ HRD K N+LL + + ++D GLA P T GT Y+
Sbjct: 138 EGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTH----GQVGTRRYMA 193
Query: 403 PE-------YQQTGMLTTKSDIYSFGIMLLQIIT 429
PE +Q+ L + D+Y+ G++L ++++
Sbjct: 194 PEVLEGAINFQRDAFL--RIDMYAMGLVLWELVS 225
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 105/208 (50%), Gaps = 25/208 (12%)
Query: 237 IGEGGYGPVYRG--KLDHTPVAIKVL-----RPDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
+G G +G V G +L VA+K+L R GK ++E++ L RHP+++ L
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGK--IKREIQNLKLFRHPHIIKL 76
Query: 290 --LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPE 347
+ + P +V EY+ G L D + + G + R+ F+ +I +A+ + H+
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ---QILSAVDYCHR---H 130
Query: 348 PLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQ 407
+VHRDLKP N+LLD + +KI+D GL+ ++ S ++ + + G+ Y PE
Sbjct: 131 MVVHRDLKPENVLLDAHMNAKIADFGLSNMM------SDGEF-LRDSCGSPNYAAPEVIS 183
Query: 408 TGMLTT-KSDIYSFGIMLLQIITARSPM 434
+ + DI+S G++L ++ P
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 30/216 (13%)
Query: 236 KIGEGGYGPVYRGKLDHTPV--AIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
++G+G +G VY+ K T A KV+ + + + E+E+L++ HP +V LLGA
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 294 PDYGCL--VYEYMHNGSLEDRLLR--RGNT-PVIPWRKRFKIAAEIATALLFLHQAKPEP 348
G L + E+ G+++ +L RG T P I + ++ AL FLH +
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----VVCRQMLEALNFLHSKR--- 129
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
++HRDLK N+L+ +++D G+ S + T S GT ++ PE
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGV------SAKNLKTLQKRDSFIGTPYWMAPEVVMC 183
Query: 409 GMLTT-----KSDIYSFGIMLLQIITARSPMGLTHH 439
+ K+DI+S GI L+++ P HH
Sbjct: 184 ETMKDTPYDYKADIWSLGITLIEMAQIEPP----HH 215
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 118/273 (43%), Gaps = 45/273 (16%)
Query: 229 DKFSEAMKIGEGGYGPVYRG------KLDHT-PVAIKVLRPDAAQGKRQ-FQQEVEVLSS 280
++ S +G G +G V K D VA+K+L+P A +R+ E++VLS
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 281 I-RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRR-------GNTPVI-------- 322
+ H N+V LLGAC G ++ EY G L + L R+ +P I
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
+ ++A + FL +HRDL NILL ++KI D GLAR +
Sbjct: 166 DLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLAR----HI 218
Query: 383 ADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP---MGLTH 438
+ +A ++ PE + T +SD++S+GI L ++ + SP M +
Sbjct: 219 KNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS 278
Query: 439 HVSRAIEKG--------TLAEMLDPAVTDWPAE 463
+ I++G AEM D T W A+
Sbjct: 279 KFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDAD 311
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 84/175 (48%), Gaps = 19/175 (10%)
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDR-----LLRRGNTPVIP 323
F+ E+++++ I++ + G +Y ++YEYM N S+ +L + T IP
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 324 WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVA 383
+ I + + ++H K + HRD+KP+NIL+D+N K+SD G +
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNEKN--ICHRDVKPSNILMDKNGRVKLSDFG--------ES 199
Query: 384 DSVTQYHMTSAAGTFCYIDPEY--QQTGMLTTKSDIYSFGIMLLQIITARSPMGL 436
+ + + + GT+ ++ PE+ ++ K DI+S GI L + P L
Sbjct: 200 EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSL 254
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQ-QEVEVLS 279
++ + +++ IGEG YG V L+ VAIK + P Q Q +E+++L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILL 80
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 141 LKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADP---DHDHTGFLTEYVAT 194
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 237 IGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
IG+G + V R L VA+K++ + +++ ++ F+ EV ++ + HPN+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 292 ACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
L V EY G + D L+ G R +F+ +I +A+ + HQ + +
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQ---KFI 134
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC----YIDPE- 404
VHRDLK N+LLD + KI+D G + ++ + FC Y PE
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS-----------NEFTFGNKLDAFCGAPPYAAPEL 183
Query: 405 YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+Q + D++S G++L +++ P
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRH 283
+ F +GEG + V + T AIK+L R + K + +E +V+S + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 284 PNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P V L D L + Y NG L + + G+ R AEI +AL +L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYL 146
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP NILL+ + +I+D G A+++ P Q GT Y+
Sbjct: 147 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP----ESKQARANXFVGTAQYV 199
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE SD+++ G ++ Q++ P
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 107/213 (50%), Gaps = 27/213 (12%)
Query: 237 IGEGGYGPVYRGKLDHT--PVAIKVL-----RPDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
+G G +G V GK + T VA+K+L R GK ++E++ L RHP+++ L
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGK--IRREIQNLKLFRHPHIIKL 81
Query: 290 --LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPE 347
+ + P +V EY+ G L D + + G R+ F+ +I + + + H+
Sbjct: 82 YQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQ---QILSGVDYCHRHM-- 136
Query: 348 PLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQ 407
+VHRDLKP N+LLD + +KI+D GL+ ++ S ++ + + G+ Y PE
Sbjct: 137 -VVHRDLKPENVLLDAHMNAKIADFGLSNMM------SDGEF-LRXSCGSPNYAAPEV-I 187
Query: 408 TGMLTT--KSDIYSFGIMLLQIITARSPMGLTH 438
+G L + DI+S G++L ++ P H
Sbjct: 188 SGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRH 283
+ F +GEG + V + T AIK+L R + K + +E +V+S + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 284 PNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P V L D L + Y NG L + + G+ R AEI +AL +L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYL 146
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP NILL+ + +I+D G A+++ P Q GT Y+
Sbjct: 147 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK----QARANXFVGTAQYV 199
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE SD+++ G ++ Q++ P
Sbjct: 200 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRH 283
+ F +GEG + V + T AIK+L R + K + +E +V+S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 284 PNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P V L D L + Y NG L + + G+ R AEI +AL +L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYL 148
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP NILL+ + +I+D G A+++ P Q GT Y+
Sbjct: 149 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP----ESKQARANXFVGTAQYV 201
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE SD+++ G ++ Q++ P
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRHPNMVLLLG 291
+GEG + V + T AIK+L R + K + +E +V+S + HP V L
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 74
Query: 292 ACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
D L + Y NG L + + G+ R AEI +AL +LH + +
Sbjct: 75 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYLHG---KGI 128
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDLKP NILL+ + +I+D G A+++ P Q GT Y+ PE
Sbjct: 129 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESK----QARANXFVGTAQYVSPELLTEK 184
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
SD+++ G ++ Q++ P
Sbjct: 185 SACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRH 283
+ F +GEG + V + T AIK+L R + K + +E +V+S + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 284 PNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P V L D L + Y NG L + + G+ R AEI +AL +L
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYL 153
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP NILL+ + +I+D G A+++ P Q GT Y+
Sbjct: 154 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP----ESKQARANXFVGTAQYV 206
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE SD+++ G ++ Q++ P
Sbjct: 207 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAI LR + + ++ E V++S+
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVD 109
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 110 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 163
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 164 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 216
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 251
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRHPNMVLLLG 291
+GEG + V + T AIK+L R + K + +E +V+S + HP V L
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 75
Query: 292 ACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
D L + Y NG L + + G+ R AEI +AL +LH + +
Sbjct: 76 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYLHG---KGI 129
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDLKP NILL+ + +I+D G A+++ P Q GT Y+ PE
Sbjct: 130 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESK----QARANXFVGTAQYVSPELLTEK 185
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
SD+++ G ++ Q++ P
Sbjct: 186 SACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRH 283
+ F +GEG + V + T AIK+L R + K + +E +V+S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 284 PNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P V L D L + Y NG L + + G+ R AEI +AL +L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYL 148
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP NILL+ + +I+D G A+++ P Q GT Y+
Sbjct: 149 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP----ESKQARANXFVGTAQYV 201
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE SD+++ G ++ Q++ P
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D G A+L + +YH
Sbjct: 132 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKL----LGAEEKEYHAEGGKVP 184
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 30/211 (14%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI--RHPNMVLLLGA-- 292
+G+G YG V+RG VA+K+ +++ ++ + +E E+ +++ RH N++ + +
Sbjct: 16 VGKGRYGEVWRGLWHGESVAVKIF---SSRDEQSWFRETEIYNTVLLRHDNILGFIASDM 72
Query: 293 ----CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH------ 342
L+ Y +GSL D L R+ P + ++A A L LH
Sbjct: 73 TSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA----LRLAVSAACGLAHLHVEIFGT 128
Query: 343 QAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYID 402
Q KP + HRD K N+L+ N I+D+GLA V S GT Y+
Sbjct: 129 QGKPA-IAHRDFKSRNVLVKSNLQCCIADLGLA--VMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 403 PEYQQTGMLT------TKSDIYSFGIMLLQI 427
PE + T +DI++FG++L +I
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRHPNMVLLLG 291
+GEG + V + T AIK+L R + K + +E +V+S + HP V L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 81
Query: 292 ACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
D L + Y NG L + + G+ R AEI +AL +LH + +
Sbjct: 82 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYLHG---KGI 135
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDLKP NILL+ + +I+D G A+++ P Q GT Y+ PE
Sbjct: 136 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESK----QARANXFVGTAQYVSPELLTEK 191
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
SD+++ G ++ Q++ P
Sbjct: 192 SACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRH 283
+ F +GEG + V + T AIK+L R + K + +E +V+S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 284 PNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P V L D L + Y NG L + + G+ R AEI +AL +L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYL 148
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP NILL+ + +I+D G A+++ P Q GT Y+
Sbjct: 149 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP----ESKQARANXFVGTAQYV 201
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE SD+++ G ++ Q++ P
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 113/247 (45%), Gaps = 23/247 (9%)
Query: 237 IGEGGYGPVYRGKLDHT--PVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGACP 294
+G G +G V++ + T +A K+++ + K + + E+ V++ + H N++ L A
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE 156
Query: 295 DYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHR 352
LV EY+ G L DR++ + +I + +HQ ++H
Sbjct: 157 SKNDIVLVMEYVDGGELFDRIIDESYN--LTELDTILFMKQICEGIRHMHQMY---ILHL 211
Query: 353 DLKPANIL-LDRNYVS-KISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGM 410
DLKP NIL ++R+ KI D GLAR P + + GT ++ PE
Sbjct: 212 DLKPENILCVNRDAKQIKIIDFGLARRYKP-------REKLKVNFGTPEFLAPEVVNYDF 264
Query: 411 LTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLA---EMLDPAVTDWPAEAAES 467
++ +D++S G++ +++ SP L + + + LA ++ D D EA E
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPF-LGDNDAETL-NNILACRWDLEDEEFQDISEEAKEF 322
Query: 468 FSKLAIQ 474
SKL I+
Sbjct: 323 ISKLLIK 329
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRH 283
+ F +GEG + V + T AIK+L R + K + +E +V+S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 284 PNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P V L D L + Y NG L + + G+ R AEI +AL +L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYL 148
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP NILL+ + +I+D G A+++ P Q GT Y+
Sbjct: 149 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP----ESKQARANXFVGTAQYV 201
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE SD+++ G ++ Q++ P
Sbjct: 202 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + + G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 83 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 137 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 189
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRH 283
+ F +GEG + V + T AIK+L R + K + +E +V+S + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 284 PNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P V L D L + Y NG L + + G+ R AEI +AL +L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYL 148
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP NILL+ + +I+D G A+++ P Q GT Y+
Sbjct: 149 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP----ESKQARANXFVGTAQYV 201
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE SD+++ G ++ Q++ P
Sbjct: 202 SPELLTEKSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRH 283
+ F +GEG + V + T AIK+L R + K + +E +V+S + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 284 PNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P V L D L + Y NG L + + G+ R AEI +AL +L
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYL 149
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP NILL+ + +I+D G A+++ P Q GT Y+
Sbjct: 150 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP----ESKQARANXFVGTAQYV 202
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE SD+++ G ++ Q++ P
Sbjct: 203 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 78 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D G A+L + +YH
Sbjct: 132 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKL----LGAEEKEYHAEGGKVP 184
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRH 283
+ F +GEG + V + T AIK+L R + K + +E +V+S + H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 284 PNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P V L D L + Y NG L + + G+ R AEI +AL +L
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYL 125
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP NILL+ + +I+D G A+++ P Q GT Y+
Sbjct: 126 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK----QARANXFVGTAQYV 178
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE SD+++ G ++ Q++ P
Sbjct: 179 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + + G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 137 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 189
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 78 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 131
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D G A+L + +YH
Sbjct: 132 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKL----LGAEEKEYHAEGGKVP 184
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 219
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 80 NPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 133
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D G A+L + +YH
Sbjct: 134 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKL----LGAEEKEYHAEGGKVP 186
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 221
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRHPNMVLLLG 291
+GEG + V + T AIK+L R + K + +E +V+S + HP V L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 292 ACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
D L + Y NG L + + G+ R AEI +AL +LH + +
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYLHG---KGI 150
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDLKP NILL+ + +I+D G A+++ P Q GT Y+ PE
Sbjct: 151 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESK----QARANXFVGTAQYVSPELLTEK 206
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
SD+++ G ++ Q++ P
Sbjct: 207 SACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + + G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D GLA+L + +YH
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKL----LGAEEKEYHAEGGKVP 182
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 17/213 (7%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRH 283
+ F +GEG + V + T AIK+L R + K + +E +V+S + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 284 PNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
P V L D L + Y NG L + + G+ R AEI +AL +L
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYL 151
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + ++HRDLKP NILL+ + +I+D G A+++ P Q GT Y+
Sbjct: 152 HG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSP----ESKQARANXFVGTAQYV 204
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE SD+++ G ++ Q++ P
Sbjct: 205 SPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 273 QEVEVLSSIRHPNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKI 330
+E +V+S + HP V L D L + Y NG L + + G+ R
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---Y 135
Query: 331 AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH 390
AEI +AL +LH + ++HRDLKP NILL+ + +I+D G A+++ P Q
Sbjct: 136 TAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK----QAR 188
Query: 391 MTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
GT Y+ PE SD+++ G ++ Q++ P
Sbjct: 189 ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V L+ VAIK + P Q Q +E+++L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 80
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 141 LKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADP---DHDHTGFLTEYVAT 194
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQF-QQEVEVLSSIRHPNMVLLLG 291
+GEG + V + T AIK+L R + K + +E +V+S + HP V L
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 77
Query: 292 ACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
D L + Y NG L + + G+ R AEI +AL +LH + +
Sbjct: 78 TFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRF---YTAEIVSALEYLHG---KGI 131
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDLKP NILL+ + +I+D G A+++ P Q GT Y+ PE
Sbjct: 132 IHRDLKPENILLNEDMHIQITDFGTAKVLSPESK----QARANXFVGTAQYVSPELLTEK 187
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
SD+++ G ++ Q++ P
Sbjct: 188 SACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 82
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 83 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 136
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D G A+L + +YH
Sbjct: 137 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKL----LGAEEKEYHAEGGKVP 189
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 224
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 25/215 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRG------KLDHTPVAIKVLR-PDAAQGKRQFQQEVEVLSSIR 282
+F + +G G +G VY+G + PVAIK LR + + ++ E V++S+
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 283 HPNMVLLLGACPDYGC-LVYEYMHNGSLEDRLLRR----GNTPVIPWRKRFKIAAEIATA 337
+P++ LLG C L+ + M G L D + G+ ++ W +IA
Sbjct: 76 NPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 129
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ +L + LVHRDL N+L+ KI+D G A+L + +YH
Sbjct: 130 MNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKL----LGAEEKEYHAEGGKVP 182
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
++ E + T +SD++S+G+ + +++T S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGS 217
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V L+ VAIK + P Q Q +E+++L
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 74
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 134
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 135 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLTEYVAT 188
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 234
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V L+ VAIK + P Q Q +E+++L
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 81
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 141
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 142 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLTEYVAT 195
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 241
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 237 IGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQ----FQQEVEVLSSIRHPNMVLLL 290
IG+G +G V R K + A+KVL+ A K++ + +L +++HP +V L
Sbjct: 46 IGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLH 105
Query: 291 GA--CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
+ D V +Y++ G L L R + R RF AAEIA+AL +LH
Sbjct: 106 FSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARF-YAAEIASALGYLHSLN--- 159
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC----YIDPE 404
+V+RDLKP NILLD ++D GL + S TFC Y+ PE
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCK----------ENIEHNSTTSTFCGTPEYLAPE 209
Query: 405 YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
D + G +L +++ P
Sbjct: 210 VLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V L+ VAIK + P Q Q +E+++L
Sbjct: 23 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 82
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 83 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 142
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 143 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLTEYVAT 196
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 197 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 242
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V L+ VAIK + P Q Q +E+++L
Sbjct: 14 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 73
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 74 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 133
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 134 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLTEYVAT 187
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 188 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 233
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V L+ VAIK + P Q Q +E+++L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 80
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 141 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLTEYVAT 194
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V + K H K+ RP KR
Sbjct: 19 YRQELNKTIWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT 78
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 79 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 135
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 136 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 184
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 185 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 241
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V L+ VAIK + P Q Q +E+++L
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 74
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 75 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 134
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 135 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLTEYVAT 188
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 189 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 234
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V + K H K+ RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 111/274 (40%), Gaps = 30/274 (10%)
Query: 236 KIGEGGYGPVYRGKLDHTPVAIKVL--RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+ E G +++G+ + +KVL R + + R F +E L HPN++ +LGAC
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 294 PD----YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
+ L+ + GSL + +L G V+ + K A + A FLH EPL
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYN-VLHEGTNFVVDQSQAVKFALDXARGXAFLHTL--EPL 133
Query: 350 VHRD-LKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
+ R L ++ +D + ++I S AD + ++ PE Q
Sbjct: 134 IPRHALNSRSVXIDEDXTARI-----------SXADVKFSFQSPGRXYAPAWVAPEALQK 182
Query: 409 GMLTTK---SDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAA 465
T +D +SF ++L +++T P + I E L P + P +
Sbjct: 183 KPEDTNRRSADXWSFAVLLWELVTREVPFADLSNXE--IGXKVALEGLRPTI---PPGIS 237
Query: 466 ESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKD 499
SKL C RP IVP L + +D
Sbjct: 238 PHVSKLXKICXNEDPAKRPKFDX-IVPILEKXQD 270
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V + K H K+ RP KR
Sbjct: 29 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT 88
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 89 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 146 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 194
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 195 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 251
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V + K H K+ RP KR
Sbjct: 28 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT 87
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 88 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 144
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 145 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 193
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 194 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 250
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 237 IGEGGYGPVYRGK--LDHTPVAIKVLRPDAAQGKR-QFQQEVEVLSSIRHPNMVLLLGAC 293
IG GG+ V L VAIK++ + + + E+E L ++RH ++ L
Sbjct: 18 IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVL 77
Query: 294 --PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ +V EY G L D ++ + R F+ +I +A+ ++H + H
Sbjct: 78 ETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR---QIVSAVAYVHS---QGYAH 131
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY-QQTGM 410
RDLKP N+L D + K+ D GL P D YH+ + G+ Y PE Q
Sbjct: 132 RDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKD----YHLQTCCGSLAYAAPELIQGKSY 186
Query: 411 LTTKSDIYSFGIMLLQIITARSPM 434
L +++D++S GI+L ++ P
Sbjct: 187 LGSEADVWSMGILLYVLMCGFLPF 210
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 30/210 (14%)
Query: 237 IGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
IG+G + V R L VA+K++ + +++ ++ F+ EV + + HPN+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRIXKVLNHPNIVKLFE 80
Query: 292 ACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
L V EY G + D L+ G R +F+ +I +A+ + HQ + +
Sbjct: 81 VIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR---QIVSAVQYCHQ---KFI 134
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC----YIDPE- 404
VHRDLK N+LLD + KI+D G + ++ + FC Y PE
Sbjct: 135 VHRDLKAENLLLDADXNIKIADFGFS-----------NEFTFGNKLDAFCGAPPYAAPEL 183
Query: 405 YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+Q + D++S G++L +++ P
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V ++ VAIK + P Q Q +E+++L
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 78
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
+ RH N++ + + P + Y+ +E L + T + +I
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 138
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 139 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLTEYVAT 192
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 238
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 90/214 (42%), Gaps = 27/214 (12%)
Query: 237 IGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQG--KRQFQQEVEVLSSIRHPNMVLLLGA 292
IG G YG R K D + K L + K+ EV +L ++HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 293 CPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRF--KIAAEIATALLFLHQAKP 346
D +V EY G L ++ +G + F ++ ++ AL H+
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 347 --EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC----Y 400
++HRDLKPAN+ LD K+ D GLAR++ H TS A TF Y
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN----------HDTSFAKTFVGTPYY 182
Query: 401 IDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ PE KSDI+S G +L ++ P
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLL 289
IGEG +G V++G + +P VAIK + + R+ F QE + HP++V L
Sbjct: 398 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 290 LGACPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
+G + ++ E G L L R + + A +++TAL +L +
Sbjct: 457 IGVITENPVWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLESKR--- 511
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
VHRD+ N+L+ N K+ D GL+R + S T Y + ++ PE
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPESINF 566
Query: 409 GMLTTKSDIYSFGIMLLQII 428
T+ SD++ FG+ + +I+
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V ++ VAIK + P Q Q +E+++L
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 78
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
+ RH N++ + + P + Y+ +E L + T + +I
Sbjct: 79 AFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 138
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 139 LKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADP---DHDHTGFLTEYVAT 192
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 238
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V + K H K+ RP KR
Sbjct: 15 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT 74
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 75 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 132 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 180
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 181 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 237
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 101/227 (44%), Gaps = 38/227 (16%)
Query: 231 FSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
F E +G+G +G V R LD AIK +R + EV +L+S+ H +V
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIR-HTEEKLSTILSEVXLLASLNHQYVVR 66
Query: 289 LLGACPDYGCLV---------------YEYMHNGSLEDRLLRRGNTPVIPWRKR---FKI 330
A + V EY N +L D L+ N ++R +++
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYD-LIHSENLN----QQRDEYWRL 121
Query: 331 AAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV----ADSV 386
+I AL ++H + ++HR+LKP NI +D + KI D GLA+ V S+ DS
Sbjct: 122 FRQILEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 387 ----TQYHMTSAAGTFCYIDPEY-QQTGMLTTKSDIYSFGIMLLQII 428
+ ++TSA GT Y+ E TG K D YS GI+ + I
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 30/210 (14%)
Query: 237 IGEGGYGPVY--RGKLDHTPVAIKVL---RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
IG+G + V R L VA++++ + +++ ++ F+ EV ++ + HPN+V L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRIMKVLNHPNIVKLFE 80
Query: 292 ACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
L V EY G + D L+ G R +F+ +I +A+ + HQ + +
Sbjct: 81 VIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QIVSAVQYCHQ---KFI 134
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC----YIDPE- 404
VHRDLK N+LLD + KI+D G + ++ + FC Y PE
Sbjct: 135 VHRDLKAENLLLDADMNIKIADFGFS-----------NEFTFGNKLDEFCGSPPYAAPEL 183
Query: 405 YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+Q + D++S G++L +++ P
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 111/251 (44%), Gaps = 24/251 (9%)
Query: 236 KIGEGGYGPVYRGKLDHTPV--AIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
++G+G +G VY+ + T V A KV+ + + + E+++L+S HPN+V LL A
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 294 --PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ ++ E+ G++ D ++ P+ + + + + AL +LH K ++H
Sbjct: 104 YYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQV-VCKQTLDALNYLHDNK---IIH 158
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGM- 410
RDLK NIL + K++D G+ S ++ S GT ++ PE
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGV------SAKNTRXIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 411 ----LTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
K+D++S GI L+++ P HH + +P P+ +
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPP----HHELNPMRVLLKIAKSEPPTLAQPSRWSS 268
Query: 467 SFSKLAIQCAE 477
+F +C E
Sbjct: 269 NFKDFLKKCLE 279
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V + K H K+ RP KR
Sbjct: 5 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT 64
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 65 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 122 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 170
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 171 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLL 289
IGEG +G V++G + +P VAIK + + R+ F QE + HP++V L
Sbjct: 20 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 290 LGACPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
+G + ++ E G L L R + + A +++TAL +L +
Sbjct: 79 IGVITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESKR--- 133
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
VHRD+ N+L+ N K+ D GL+R + S T Y + ++ PE
Sbjct: 134 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPESINF 188
Query: 409 GMLTTKSDIYSFGIMLLQII 428
T+ SD++ FG+ + +I+
Sbjct: 189 RRFTSASDVWMFGVCMWEIL 208
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 24/221 (10%)
Query: 225 EEATDKFSEAMKI-GEGGYGPVYRGKLDHTP-----VAIKVLRPDAAQGKRQFQQEVE-- 276
E+A E +K+ G+G +G V+ + P A+KVL+ + + + + ++E
Sbjct: 23 EKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERD 82
Query: 277 VLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKI-AAE 333
+L+ + HP +V L A G L+ +++ G L RL + V+ + K AE
Sbjct: 83 ILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEEDVKFYLAE 138
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
+A L LH +++RDLKP NILLD K++D GL++ ++ Y S
Sbjct: 139 LALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAY---S 189
Query: 394 AAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
GT Y+ PE + +D +S+G+++ +++T P
Sbjct: 190 FCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V ++ VAIK + P Q Q +E+++L
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 76
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 137 LKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADP---DHDHTGFLTEYVAT 190
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 236
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 35/283 (12%)
Query: 231 FSEAMKIGEGGYGPVYRG---------KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI 281
F+E++ G+G + +++G +L T V +KVL F + ++S +
Sbjct: 12 FNESL--GQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 282 RHPNMVLLLGACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
H ++VL G C D LV E++ GSL+ L + N I W + ++A ++A A+
Sbjct: 70 SHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAAAMH 127
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
FL + L+H ++ NILL R K + +L P + S+T
Sbjct: 128 FLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGI--SITVLPKDILQERIP 182
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVT 458
++ PE + L +D +SFG L +I + R ++ L
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQL----- 237
Query: 459 DWPAEAAESFSKLAIQCAELRKKDRP-------DLGTVIVPEL 494
PA A + L C + RP DL ++ P+L
Sbjct: 238 --PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQ-QEVEVLS 279
++ + +++ IGEG YG V ++ VAIK + P Q Q +E+++L
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 76
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 137 LKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADP---DHDHTGFLTEYVAT 190
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 236
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLL 289
IGEG +G V++G + +P VAIK + + R+ F QE + HP++V L
Sbjct: 15 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 290 LGACPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
+G + ++ E G L L R + + A +++TAL +L +
Sbjct: 74 IGVITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESKR--- 128
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
VHRD+ N+L+ N K+ D GL+R + S T Y + ++ PE
Sbjct: 129 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPESINF 183
Query: 409 GMLTTKSDIYSFGIMLLQII 428
T+ SD++ FG+ + +I+
Sbjct: 184 RRFTSASDVWMFGVCMWEIL 203
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLL 289
IGEG +G V++G + +P VAIK + + R+ F QE + HP++V L
Sbjct: 21 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 290 LGACPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
+G + ++ E G L L R + + A +++TAL +L +
Sbjct: 80 IGVITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESKR--- 134
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
VHRD+ N+L+ N K+ D GL+R + S T Y + ++ PE
Sbjct: 135 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPESINF 189
Query: 409 GMLTTKSDIYSFGIMLLQII 428
T+ SD++ FG+ + +I+
Sbjct: 190 RRFTSASDVWMFGVCMWEIL 209
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQ-QEVEVLS 279
++ + +++ IGEG YG V L+ VAI+ + P Q Q +E+++L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILL 80
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 141 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLTEYVAT 194
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 35/283 (12%)
Query: 231 FSEAMKIGEGGYGPVYRG---------KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI 281
F+E++ G+G + +++G +L T V +KVL F + ++S +
Sbjct: 12 FNESL--GQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL 69
Query: 282 RHPNMVLLLGA--CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
H ++VL G C D LV E++ GSL+ L + N I W + ++A ++A A+
Sbjct: 70 SHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILW--KLEVAKQLAWAMH 127
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
FL + L+H ++ NILL R K + +L P + S+T
Sbjct: 128 FLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGI--SITVLPKDILQERIP 182
Query: 400 YIDPE-YQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVT 458
++ PE + L +D +SFG L +I + R ++ L
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQL----- 237
Query: 459 DWPAEAAESFSKLAIQCAELRKKDRP-------DLGTVIVPEL 494
PA A + L C + RP DL ++ P+L
Sbjct: 238 --PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V ++ VAIK + P Q Q +E+++L
Sbjct: 25 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 84
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 85 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 144
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 145 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLTEYVAT 198
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 199 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 244
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V ++ VAIK + P Q Q +E+++L
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 76
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 137 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLTEYVAT 190
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 236
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 102/230 (44%), Gaps = 22/230 (9%)
Query: 216 YRKYTIEEIE----EATDKFSEAMKIGEGGYGPVYR--GKLDHTPVAIKVLRPDAAQGKR 269
+++Y + +E D + ++G G +G V+R + A K + K
Sbjct: 34 WKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE 93
Query: 270 QFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKR 327
++E++ +S +RHP +V L A D ++YE+M G L +++ N + +
Sbjct: 94 TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEA 151
Query: 328 FKIAAEIATALLFLHQAKPEPLVHRDLKPANILL--DRNYVSKISDVGLARLVPPSVADS 385
+ ++ L +H+ VH DLKP NI+ R+ K+ D GL + P +
Sbjct: 152 VEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 208
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMG 435
VT GT + PE + + +D++S G++ +++ SP G
Sbjct: 209 VT-------TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG 251
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V ++ VAIK + P Q Q +E+++L
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 76
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 137 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLTEYVAT 190
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 236
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V + K H K+ RP KR
Sbjct: 5 YRQELAKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT 64
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ K
Sbjct: 65 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCAKLTDD 121
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 122 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 170
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 171 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V ++ VAIK + P Q Q +E+++L
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 76
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 77 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 136
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 137 LKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADP---DHDHTGFLTEYVAT 190
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 191 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 236
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V ++ VAIK + P Q Q +E+++L
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 78
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 79 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 138
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 139 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLTEYVAT 192
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 193 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 238
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLL 289
IGEG +G V++G + +P VAIK + + R+ F QE + HP++V L
Sbjct: 18 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 290 LGACPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
+G + ++ E G L L R + + A +++TAL +L +
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESKR--- 131
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
VHRD+ N+L+ N K+ D GL+R + S T Y + ++ PE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPESINF 186
Query: 409 GMLTTKSDIYSFGIMLLQII 428
T+ SD++ FG+ + +I+
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLL 289
IGEG +G V++G + +P VAIK + + R+ F QE + HP++V L
Sbjct: 18 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 290 LGACPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
+G + ++ E G L L R + + A +++TAL +L +
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESKR--- 131
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
VHRD+ N+L+ N K+ D GL+R + S T Y + ++ PE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPESINF 186
Query: 409 GMLTTKSDIYSFGIMLLQII 428
T+ SD++ FG+ + +I+
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLL 289
IGEG +G V++G + +P VAIK + + R+ F QE + HP++V L
Sbjct: 23 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 290 LGACPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
+G + ++ E G L L R + + A +++TAL +L +
Sbjct: 82 IGVITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESKR--- 136
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
VHRD+ N+L+ N K+ D GL+R + S T Y + ++ PE
Sbjct: 137 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPESINF 191
Query: 409 GMLTTKSDIYSFGIMLLQII 428
T+ SD++ FG+ + +I+
Sbjct: 192 RRFTSASDVWMFGVCMWEIL 211
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLL 289
IGEG +G V++G + +P VAIK + + R+ F QE + HP++V L
Sbjct: 46 IGEGQFGDVHQG-IYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 290 LGACPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
+G + ++ E G L L R + + A +++TAL +L +
Sbjct: 105 IGVITENPVWIIMELCTLGELRSFLQVRKYS--LDLASLILYAYQLSTALAYLESKR--- 159
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
VHRD+ N+L+ N K+ D GL+R + S T Y + ++ PE
Sbjct: 160 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPESINF 214
Query: 409 GMLTTKSDIYSFGIMLLQII 428
T+ SD++ FG+ + +I+
Sbjct: 215 RRFTSASDVWMFGVCMWEIL 234
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 102/230 (44%), Gaps = 22/230 (9%)
Query: 216 YRKYTIEEIE----EATDKFSEAMKIGEGGYGPVYR--GKLDHTPVAIKVLRPDAAQGKR 269
+++Y + +E D + ++G G +G V+R + A K + K
Sbjct: 140 WKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE 199
Query: 270 QFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKR 327
++E++ +S +RHP +V L A D ++YE+M G L +++ N + +
Sbjct: 200 TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--MSEDEA 257
Query: 328 FKIAAEIATALLFLHQAKPEPLVHRDLKPANILL--DRNYVSKISDVGLARLVPPSVADS 385
+ ++ L +H+ VH DLKP NI+ R+ K+ D GL + P +
Sbjct: 258 VEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVK 314
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMG 435
VT GT + PE + + +D++S G++ +++ SP G
Sbjct: 315 VT-------TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFG 357
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 40/276 (14%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVL--RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC- 293
IG+G +G VY G+ H VAI+++ D + F++EV RH N+VL +GAC
Sbjct: 41 IGKGRFGQVYHGRW-HGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM 99
Query: 294 -PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHR 352
P + ++ +L + R V+ K +IA EI + +LH + ++H+
Sbjct: 100 SPPHLAIITSLCKGRTLYS--VVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHK 154
Query: 353 DLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY------- 405
DLK N+ D V I+D GL + + + + G C++ PE
Sbjct: 155 DLKSKNVFYDNGKVV-ITDFGLFS-ISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPD 212
Query: 406 --QQTGMLTTKSDIYSFGIMLLQIITARSPM--------------GLTHHVSRAIEKGTL 449
+ + SD+++ G + ++ P G+ ++S+ G
Sbjct: 213 TEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQI---GMG 269
Query: 450 AEMLDPAVTDWPAEAAE--SFSKLAIQCAELRKKDR 483
E+ D + W E E +F+KL +L K++R
Sbjct: 270 KEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 102/226 (45%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V ++ VAIK + P Q Q +E+++L
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 96
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 156
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 157 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLTEYVAT 210
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 256
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V L+ VAIK + P Q Q +E+++L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 80
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 140
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D + T
Sbjct: 141 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLXEXVAT 194
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V L+ VAIK + P Q Q +E+++L
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 81
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + T + +I
Sbjct: 82 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRG 141
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D + T
Sbjct: 142 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLXEXVAT 195
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 196 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 241
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 16/169 (9%)
Query: 226 EATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQFQQEVEVLSSI 281
++ +K+ +GEG YG V + + T VAIK D K+ +E+++L +
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLED-RLLRRGNTPVIPWRKRFKIAAEIATAL 338
RH N+V LL C LV+E++ + L+D L G + + F+I I
Sbjct: 82 RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIG--- 138
Query: 339 LFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLV--PPSVADS 385
F H ++HRD+KP NIL+ ++ V K+ D G AR + P V D
Sbjct: 139 -FCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD 183
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 16/216 (7%)
Query: 226 EATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSI 281
+ D++ IG G YG V R +L VAIK + D ++ +E+++L
Sbjct: 51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF 110
Query: 282 RHPNMVLL---LGACPDYGCLVYEYMHNGSLEDRL--LRRGNTPVIPWRKRFKIAAEIAT 336
+H N++ + L YG Y+ +E L + + P+ R+ + ++
Sbjct: 111 KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLY-QLLR 169
Query: 337 ALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
L ++H A+ ++HRDLKP+N+L++ N KI D G+AR + S A+ QY MT
Sbjct: 170 GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH--QYFMTEYVA 224
Query: 397 TFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITAR 431
T Y PE + T++ D++S G + +++ R
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 95/219 (43%), Gaps = 29/219 (13%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVEVLSSI-RHPNMVLLLGA- 292
+G G YG VY+G+ T AIKV+ + + + +QE+ +L H N+ GA
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE-EEEIKQEINMLKKYSHHRNIATYYGAF 90
Query: 293 -------CPDYGCLVYEYMHNGSLEDRLLR-RGNTPVIPWRKRFKIAAEIATALLFLHQA 344
D LV E+ GS+ D + +GNT W I EI L LHQ
Sbjct: 91 IKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLHQH 148
Query: 345 KPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPE 404
K ++HRD+K N+LL N K+ D G++ + +V + GT ++ PE
Sbjct: 149 K---VIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG------RRNTFIGTPYWMAPE 199
Query: 405 Y-----QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTH 438
KSD++S GI +++ P+ H
Sbjct: 200 VIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V + K H K+ RP KR
Sbjct: 29 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT 88
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 89 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 146 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 194
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T M T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 195 --TDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 251
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V L+ VAIK + P Q Q +E+++L
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILL 80
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ +E L + + +I
Sbjct: 81 RFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYFLYQILRG 140
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 141 LKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADP---DHDHTGFLTEYVAT 194
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 195 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 240
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 92/210 (43%), Gaps = 24/210 (11%)
Query: 237 IGEGGYGPVYRGKLDH-----TPVAIKVLRPDAAQGKR--QFQQEVEVLSSIRHPNMVLL 289
+GEG +G V G L VA+K ++ D + + +F E + HPN++ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 290 LGACPDYGC-------LVYEYMHNGSLEDRLL--RRGNTPV-IPWRKRFKIAAEIATALL 339
LG C + ++ +M G L LL R P IP + K +IA +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+L +HRDL N +L + ++D GL++ + D Q + A
Sbjct: 162 YLSNRN---FLHRDLAARNCMLRDDMTVCVADFGLSKKI--YSGDYYRQGRI--AKMPVK 214
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT 429
+I E + T+KSD+++FG+ + +I T
Sbjct: 215 WIAIESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 124/285 (43%), Gaps = 35/285 (12%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP----VAIKVLRPDA-AQGKRQ 270
Y + E E D ++G G YG V + + H P A+K +R +Q +++
Sbjct: 21 YFQGAXENFEVKADDLEPIXELGRGAYGVVEKXR--HVPSGQIXAVKRIRATVNSQEQKR 78
Query: 271 FQQEVEV-LSSIRHPNMVLLLGACPDYG-CLVYEYMHNGSLED---RLLRRGNTPVIPWR 325
++++ ++ P V GA G + + + SL+ +++ +G T IP
Sbjct: 79 LLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQT--IPED 136
Query: 326 KRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADS 385
KIA I AL LH ++HRD+KP+N+L++ K D G++ + VA
Sbjct: 137 ILGKIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKD 194
Query: 386 VTQYHMTSAAGTFCY-----IDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV 440
+ AG Y I+PE Q G + KSDI+S GI +++ R P +
Sbjct: 195 ID-------AGCKPYXAPERINPELNQKGY-SVKSDIWSLGITXIELAILRFP-----YD 241
Query: 441 SRAIEKGTLAEMLDPAVTDWPAEA-AESFSKLAIQCAELRKKDRP 484
S L ++++ PA+ + F QC + K+RP
Sbjct: 242 SWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERP 286
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 104/216 (48%), Gaps = 16/216 (7%)
Query: 226 EATDKFSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSI 281
+ D++ IG G YG V R +L VAIK + D ++ +E+++L
Sbjct: 52 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHF 111
Query: 282 RHPNMVLL---LGACPDYGCLVYEYMHNGSLEDRL--LRRGNTPVIPWRKRFKIAAEIAT 336
+H N++ + L YG Y+ +E L + + P+ R+ + ++
Sbjct: 112 KHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLY-QLLR 170
Query: 337 ALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
L ++H A+ ++HRDLKP+N+L++ N KI D G+AR + S A+ QY MT
Sbjct: 171 GLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEH--QYFMTEYVA 225
Query: 397 TFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITAR 431
T Y PE + T++ D++S G + +++ R
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V + K H K+ RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T M T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 41/247 (16%)
Query: 231 FSEAMKIGEGGYGPVYRGK--LDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
F E IG GG+G V++ K +D IK ++ + + +R EV+ L+ + H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIVH 68
Query: 289 LLGACP--DYG--------------CLVY--EYMHNGSLEDRL-LRRGNT--PVIPWRKR 327
G DY CL E+ G+LE + RRG V+
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA---- 124
Query: 328 FKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVT 387
++ +I + ++H K L++RDLKP+NI L KI D GL V
Sbjct: 125 LELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTKQVKIGDFGL-------VTSLKN 174
Query: 388 QYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKG 447
+ GT Y+ PE + + D+Y+ G++L +++ T + G
Sbjct: 175 DGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG 234
Query: 448 TLAEMLD 454
++++ D
Sbjct: 235 IISDIFD 241
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 30/211 (14%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI--RHPNMVLLLGA-- 292
+G+G YG V+RG VA+K+ +++ ++ + +E E+ +++ RH N++ + +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 293 ----CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH------ 342
L+ Y GSL D L V +I IA+ L LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIEIFGT 128
Query: 343 QAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYID 402
Q KP + HRDLK NIL+ +N I+D+GLA V S + + GT Y+
Sbjct: 129 QGKP-AIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 403 PEYQQTGMLT------TKSDIYSFGIMLLQI 427
PE + + DI++FG++L ++
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V + K H K+ RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T M T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 18/202 (8%)
Query: 236 KIGEGGYGPVYRGK--LDHTPVAIKVLRPDAAQGKRQFQ-QEVEVLSSIRHPNMVLL--L 290
K+GEG Y VY+GK L VA+K +R + +G +EV +L ++H N+V L +
Sbjct: 9 KLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 291 GACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLV 350
LV+EY+ + L+ L GN + K F ++ L + H+ K ++
Sbjct: 69 IHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLF--QLLRGLAYCHRQK---VL 122
Query: 351 HRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGM 410
HRDLKP N+L++ K++D GLAR A S+ + T Y P+
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLAR------AKSIPTKTYDNEVVTLWYRPPDILLGST 176
Query: 411 -LTTKSDIYSFGIMLLQIITAR 431
+T+ D++ G + ++ T R
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGR 198
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 30/211 (14%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI--RHPNMVLLLGA-- 292
+G+G YG V+RG VA+K+ +++ ++ + +E E+ +++ RH N++ + +
Sbjct: 16 VGKGRYGEVWRGSWQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASDM 72
Query: 293 ----CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH------ 342
L+ Y GSL D L V +I IA+ L LH
Sbjct: 73 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIEIFGT 128
Query: 343 QAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYID 402
Q KP + HRDLK NIL+ +N I+D+GLA V S + + GT Y+
Sbjct: 129 QGKP-AIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGNNPRVGTKRYMA 185
Query: 403 PEYQQTGMLT------TKSDIYSFGIMLLQI 427
PE + + DI++FG++L ++
Sbjct: 186 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 16 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 75
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 76 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR AD
Sbjct: 133 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTAD 184
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
+T Y T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 185 EMTGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 89/214 (41%), Gaps = 27/214 (12%)
Query: 237 IGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQG--KRQFQQEVEVLSSIRHPNMVLLLGA 292
IG G YG R K D + K L + K+ EV +L ++HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 293 CPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRF--KIAAEIATALLFLHQAKP 346
D +V EY G L ++ +G + F ++ ++ AL H+
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 347 --EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC----Y 400
++HRDLKPAN+ LD K+ D GLAR++ H TS A F Y
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILN----------HDTSFAKAFVGTPYY 182
Query: 401 IDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ PE KSDI+S G +L ++ P
Sbjct: 183 MSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 38/221 (17%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQ---QEVEVLSSIRHPN 285
F+ M +G+G +G V + T A+K+L+ D + E VL+ P
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 402
Query: 286 MVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK------IAAEIAT 336
+ L +C D V EY++ G L + + G RFK AAEIA
Sbjct: 403 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG---------RFKEPHAVFYAAEIAI 453
Query: 337 ALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
L FL + +++RDLK N++LD KI+D G+ + ++ D VT G
Sbjct: 454 GLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVT---TKXFCG 504
Query: 397 TFCYIDPE---YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
T YI PE YQ G D ++FG++L +++ ++P
Sbjct: 505 TPDYIAPEIIAYQPYG---KSVDWWAFGVLLYEMLAGQAPF 542
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 38/221 (17%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQ---QEVEVLSSIRHPN 285
F+ M +G+G +G V + T A+K+L+ D + E VL+ P
Sbjct: 22 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPP 81
Query: 286 MVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK------IAAEIAT 336
+ L +C D V EY++ G L + + G RFK AAEIA
Sbjct: 82 FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVG---------RFKEPHAVFYAAEIAI 132
Query: 337 ALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
L FL + +++RDLK N++LD KI+D G+ + ++ D VT G
Sbjct: 133 GLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCK---ENIWDGVTT---KXFCG 183
Query: 397 TFCYIDPE---YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
T YI PE YQ G D ++FG++L +++ ++P
Sbjct: 184 TPDYIAPEIIAYQPYG---KSVDWWAFGVLLYEMLAGQAPF 221
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 16 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 75
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 76 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR AD
Sbjct: 133 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTAD 184
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
+T Y T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 185 EMTGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 110/239 (46%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 16 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 75
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 76 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR AD
Sbjct: 133 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR----HTAD 184
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
+T Y T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 185 EMTGY-----VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 97/211 (45%), Gaps = 30/211 (14%)
Query: 237 IGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI--RHPNMVLLLGA-- 292
+G+G YG V+RG VA+K+ +++ ++ + +E E+ +++ RH N++ + +
Sbjct: 45 VGKGRYGEVWRGSWQGENVAVKIF---SSRDEKSWFRETELYNTVMLRHENILGFIASDM 101
Query: 293 ----CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH------ 342
L+ Y GSL D L V +I IA+ L LH
Sbjct: 102 TSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIEIFGT 157
Query: 343 QAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYID 402
Q KP + HRDLK NIL+ +N I+D+GLA V S + + GT Y+
Sbjct: 158 QGKP-AIAHRDLKSKNILVKKNGQCCIADLGLA--VMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 403 PEYQQTGMLT------TKSDIYSFGIMLLQI 427
PE + + DI++FG++L ++
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 34/236 (14%)
Query: 237 IGEGGYGPVYRG-------KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
+GEG +G V K+ + KVL QG+ ++E+ L +RHP+++ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYLRLLRHPHIIKL 79
Query: 290 LGACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPE 347
D +V EY N L D +++R R+ F+ +I +A+ + H+ K
Sbjct: 80 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ---QIISAVEYCHRHK-- 133
Query: 348 PLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQ 407
+VHRDLKP N+LLD + KI+D GL+ ++ + ++ G+ Y PE
Sbjct: 134 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-------NFLKTSCGSPNYAAPEVIS 185
Query: 408 TGMLTT-KSDIYSFGIMLLQIITARSPMG------LTHHVSRAIEKGTLAEMLDPA 456
+ + D++S G++L ++ R P L ++S + TL + L P
Sbjct: 186 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY--TLPKFLSPG 239
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 34/236 (14%)
Query: 237 IGEGGYGPVYRG-------KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
+GEG +G V K+ + KVL QG+ ++E+ L +RHP+++ L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYLRLLRHPHIIKL 78
Query: 290 LGACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPE 347
D +V EY N L D +++R R+ F+ +I +A+ + H+ K
Sbjct: 79 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ---QIISAVEYCHRHK-- 132
Query: 348 PLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQ 407
+VHRDLKP N+LLD + KI+D GL+ ++ + ++ G+ Y PE
Sbjct: 133 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-------NFLKTSCGSPNYAAPEVIS 184
Query: 408 TGMLTT-KSDIYSFGIMLLQIITARSPMG------LTHHVSRAIEKGTLAEMLDPA 456
+ + D++S G++L ++ R P L ++S + TL + L P
Sbjct: 185 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY--TLPKFLSPG 238
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 105/260 (40%), Gaps = 54/260 (20%)
Query: 231 FSEAMKIGEGGYGPVYRGK--LDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
F E IG GG+G V++ K +D I+ ++ + + +R EV+ L+ + H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIVH 69
Query: 289 LLGA----------------CPDYG-------------CLVY--EYMHNGSLEDRL-LRR 316
G DY CL E+ G+LE + RR
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 317 GNT--PVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGL 374
G V+ ++ +I + ++H K L+HRDLKP+NI L KI D GL
Sbjct: 130 GEKLDKVLA----LELFEQITKGVDYIHSKK---LIHRDLKPSNIFLVDTKQVKIGDFGL 182
Query: 375 ARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
V T + GT Y+ PE + + D+Y+ G++L +++
Sbjct: 183 -------VTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTA 235
Query: 435 GLTHHVSRAIEKGTLAEMLD 454
T + G ++++ D
Sbjct: 236 FETSKFFTDLRDGIISDIFD 255
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 110/251 (43%), Gaps = 24/251 (9%)
Query: 236 KIGEGGYGPVYRGKLDHTPV--AIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
++G+G +G VY+ + T V A KV+ + + + E+++L+S HPN+V LL A
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 103
Query: 294 --PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ ++ E+ G++ D ++ P+ + + + + AL +LH K ++H
Sbjct: 104 YYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQV-VCKQTLDALNYLHDNK---IIH 158
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGM- 410
RDLK NIL + K++D G+ S ++ GT ++ PE
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGV------SAKNTRXIQRRDXFIGTPYWMAPEVVMCETS 212
Query: 411 ----LTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAAE 466
K+D++S GI L+++ P HH + +P P+ +
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPP----HHELNPMRVLLKIAKSEPPTLAQPSRWSS 268
Query: 467 SFSKLAIQCAE 477
+F +C E
Sbjct: 269 NFKDFLKKCLE 279
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 31/254 (12%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLL 290
F K+GEG YG VY+ T + + + ++ +E+ ++ P++V
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYY 90
Query: 291 GACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIAT-------ALLFL 341
G+ L V EY GS+ D +I R + EIAT L +L
Sbjct: 91 GSYFKNTDLWIVMEYCGAGSVSD---------IIRLRNKTLTEDEIATILQSTLKGLEYL 141
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYI 401
H + +HRD+K NILL+ +K++D G+A + +A GT ++
Sbjct: 142 HFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKR------NXVIGTPFWM 192
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWP 461
PE Q +DI+S GI +++ + P H + RAI + P P
Sbjct: 193 APEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-RAI---FMIPTNPPPTFRKP 248
Query: 462 AEAAESFSKLAIQC 475
+++F+ QC
Sbjct: 249 ELWSDNFTDFVKQC 262
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V + K H K+ RP KR
Sbjct: 5 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT 64
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 65 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 122 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 170
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T M T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 171 --TDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 22/206 (10%)
Query: 237 IGEGGYGPVYRGKLDHT--PVAIKVLRPDAAQGK---RQFQQEVEVLSSIRHPNMVLLLG 291
+GEG +G V T VA+K + + + ++E+ L +RHP+++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 292 AC--PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
P +V EY G L D ++ + R+ F+ +I A+ + H+ K +
Sbjct: 77 VITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQ---QIICAIEYCHRHK---I 129
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDLKP N+LLD N KI+D GL+ ++ + ++ G+ Y PE
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-------NFLKTSCGSPNYAAPEVINGK 182
Query: 410 MLT-TKSDIYSFGIMLLQIITARSPM 434
+ + D++S GI+L ++ R P
Sbjct: 183 LYAGPEVDVWSCGIVLYVMLVGRLPF 208
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Query: 237 IGEGGYGPVYRGKLDHTP----VAIKVLRP-DAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
+GEG YG V H P VAIK + P D + +E+++L +H N++ +
Sbjct: 19 LGEGAYGVVCSAT--HKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 292 AC-PD-YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
PD + Y+ ++ L R +T ++ + A+ LH + +
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN---V 133
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSV----TQYHMTSAAGTFCYIDPEY 405
+HRDLKP+N+L++ N K+ D GLAR++ S AD+ Q MT T Y PE
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEV 193
Query: 406 QQTGMLTTKS-DIYSFGIMLLQIITAR 431
T +++ D++S G +L ++ R
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ IG G YG V T VA+K L RP KR
Sbjct: 14 YRQELNKTIWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 73
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 74 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 131 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH------- 179
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 180 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 236
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 98/212 (46%), Gaps = 26/212 (12%)
Query: 236 KIGEGGYGPVYRGKLDHTP----VAIKVLRP--DAAQGKRQFQQEVEVLSSIRHPNMVLL 289
+IG G YG V K+ H P +A+K +R D + K+ V+ S P +V
Sbjct: 29 EIGRGAYGSV--NKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQF 86
Query: 290 LGACPDYG-CLVYEYMHNGSLED--RLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
GA G C + + + S + + + VIP KI +AT H +
Sbjct: 87 YGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKIT--LATVKALNHLKEN 144
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCY-----I 401
++HRD+KP+NILLDR+ K+ D G++ + DS+ + T AG Y I
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGISG----QLVDSIAK---TRDAGCRPYMAPERI 197
Query: 402 DPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
DP + G +SD++S GI L ++ T R P
Sbjct: 198 DPSASRQG-YDVRSDVWSLGITLYELATGRFP 228
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 26/226 (11%)
Query: 230 KFSEAMKIGEGGYGPVYRGKLDH---TPVAIKVLRPDAAQGKRQFQ-QEVEVLSSIRHPN 285
++++ IGEG YG V DH T VAIK + P Q Q +E+++L RH N
Sbjct: 44 RYTQLQYIGEGAYGMV-SSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHEN 102
Query: 286 MVLL--------LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
++ + L A D Y+ +E L + + + +I
Sbjct: 103 VIGIRDILRASTLEAMRDV------YIVQDLMETDLYKLLKSQQLSNDHICYFLYQILRG 156
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+L++ KI D GLAR+ P + +T T
Sbjct: 157 LKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTG---FLTEXVAT 210
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 256
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 97/207 (46%), Gaps = 17/207 (8%)
Query: 237 IGEGGYGPVYRGKLDHTP----VAIKVLRP-DAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
+GEG YG V H P VAIK + P D + +E+++L +H N++ +
Sbjct: 19 LGEGAYGVVCSAT--HKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 292 AC-PD-YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
PD + Y+ ++ L R +T ++ + A+ LH + +
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN---V 133
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSV----TQYHMTSAAGTFCYIDPEY 405
+HRDLKP+N+L++ N K+ D GLAR++ S AD+ Q MT T Y PE
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEV 193
Query: 406 QQTGMLTTKS-DIYSFGIMLLQIITAR 431
T +++ D++S G +L ++ R
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 34/236 (14%)
Query: 237 IGEGGYGPVYRG-------KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
+GEG +G V K+ + KVL QG+ ++E+ L +RHP+++ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYLRLLRHPHIIKL 69
Query: 290 LGACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPE 347
D +V EY N L D +++R R+ F+ +I +A+ + H+ K
Sbjct: 70 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ---QIISAVEYCHRHK-- 123
Query: 348 PLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQ 407
+VHRDLKP N+LLD + KI+D GL+ ++ + ++ G+ Y PE
Sbjct: 124 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-------NFLKTSCGSPNYAAPEVIS 175
Query: 408 TGMLT-TKSDIYSFGIMLLQIITARSPMG------LTHHVSRAIEKGTLAEMLDPA 456
+ + D++S G++L ++ R P L ++S + TL + L P
Sbjct: 176 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY--TLPKFLSPG 229
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 80/158 (50%), Gaps = 16/158 (10%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL--RPDAAQGKRQFQQEVEVLSSIRHP 284
+K+ + KIGEG YG V++ + T VAIK D K+ +E+ +L ++HP
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 285 NMVLLLGAC--PDYGCLVYEYMHNGSLE--DRLLRRGNTPVIPWRKRFKIAAEIATALLF 340
N+V LL LV+EY + L DR +RG +P I + A+ F
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRY-QRG----VPEHLVKSITWQTLQAVNF 117
Query: 341 LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLV 378
H+ +HRD+KP NIL+ ++ V K+ D G ARL+
Sbjct: 118 CHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLL 152
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLL 289
IGEG +G V++G + +P VAIK + + R+ F QE + HP++V L
Sbjct: 398 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 290 LGACPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
+G + ++ E G L L R + + A +++TAL +L +
Sbjct: 457 IGVITENPVWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLESKR--- 511
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
VHRD+ N+L+ K+ D GL+R + S T Y + ++ PE
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPESINF 566
Query: 409 GMLTTKSDIYSFGIMLLQII 428
T+ SD++ FG+ + +I+
Sbjct: 567 RRFTSASDVWMFGVCMWEIL 586
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 114/273 (41%), Gaps = 25/273 (9%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQ---QEVEV 277
+I+ + F +G+G +G V+ + T AIK L+ D + E V
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 278 LS-SIRHPNMVLLLGACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEI 334
LS + HP + + L + EY++ G L + + + AAEI
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEI 128
Query: 335 ATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSA 394
L FLH + +V+RDLK NILLD++ KI+D G+ + + D+ T
Sbjct: 129 ILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKT----NEF 179
Query: 395 AGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLD 454
GT YI PE D +SFG++L +++ +SP H E M +
Sbjct: 180 CGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPF----HGQDEEELFHSIRMDN 235
Query: 455 PAVTDW-PAEAAESFSKLAIQCAELRKKDRPDL 486
P W EA + KL ++ E R R D+
Sbjct: 236 PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDI 268
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 14 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 73
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 74 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 131 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH------- 179
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 180 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 236
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 109/236 (46%), Gaps = 34/236 (14%)
Query: 237 IGEGGYGPVYRG-------KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
+GEG +G V K+ + KVL QG+ ++E+ L +RHP+++ L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR--IEREISYLRLLRHPHIIKL 73
Query: 290 LGACP--DYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPE 347
D +V EY N L D +++R R+ F+ +I +A+ + H+ K
Sbjct: 74 YDVIKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQ---QIISAVEYCHRHK-- 127
Query: 348 PLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQ 407
+VHRDLKP N+LLD + KI+D GL+ ++ + ++ G+ Y PE
Sbjct: 128 -IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-------NFLKTSCGSPNYAAPEVIS 179
Query: 408 TGMLTT-KSDIYSFGIMLLQIITARSPMG------LTHHVSRAIEKGTLAEMLDPA 456
+ + D++S G++L ++ R P L ++S + TL + L P
Sbjct: 180 GKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVY--TLPKFLSPG 233
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 24/223 (10%)
Query: 237 IGEGGYGPVYRG-----KLDHTPVAIKVLRPDAA-QGKRQFQQEVEVLSSIRHPNMVLLL 290
+GEG +G VY G K + VA+K + D K +F E ++ ++ HP++V L+
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 291 GAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPE 347
G P + ++ E G L L R N+ + + +I A+ +L
Sbjct: 76 GIIEEEPTW--IIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYLESIN-- 129
Query: 348 PLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQ 407
VHRD+ NIL+ K+ D GL+R + + Y + ++ PE
Sbjct: 130 -CVHRDIAVRNILVASPECVKLGDFGLSRYI-----EDEDYYKASVTRLPIKWMSPESIN 183
Query: 408 TGMLTTKSDIYSFGIMLLQIIT-ARSPMGLTHH--VSRAIEKG 447
TT SD++ F + + +I++ + P + V +EKG
Sbjct: 184 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG 226
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 89/210 (42%), Gaps = 19/210 (9%)
Query: 237 IGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQG--KRQFQQEVEVLSSIRHPNMVLLLGA 292
IG G YG R K D + K L + K+ EV +L ++HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 293 CPDYG----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRF--KIAAEIATALLFLHQAKP 346
D +V EY G L ++ +G + F ++ ++ AL H+
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLAS-VITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 347 --EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPE 404
++HRDLKPAN+ LD K+ D GLAR++ D ++ GT Y+ PE
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-EDFAKEF-----VGTPYYMSPE 186
Query: 405 YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
KSDI+S G +L ++ P
Sbjct: 187 QMNRMSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 20 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 79
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 80 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 136
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 137 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH------- 185
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 186 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 242
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 24/223 (10%)
Query: 237 IGEGGYGPVYRG-----KLDHTPVAIKVLRPDAA-QGKRQFQQEVEVLSSIRHPNMVLLL 290
+GEG +G VY G K + VA+K + D K +F E ++ ++ HP++V L+
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 291 GAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPE 347
G P + ++ E G L L R N+ + + +I A+ +L
Sbjct: 80 GIIEEEPTW--IIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYLESIN-- 133
Query: 348 PLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQ 407
VHRD+ NIL+ K+ D GL+R + + Y + ++ PE
Sbjct: 134 -CVHRDIAVRNILVASPECVKLGDFGLSRYI-----EDEDYYKASVTRLPIKWMSPESIN 187
Query: 408 TGMLTTKSDIYSFGIMLLQIIT-ARSPMGLTHH--VSRAIEKG 447
TT SD++ F + + +I++ + P + V +EKG
Sbjct: 188 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG 230
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 95/218 (43%), Gaps = 21/218 (9%)
Query: 224 IEEATDKFSEAMKIGEGGYGP--VYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI 281
I +D++ IG G +G + R KL VA+K + AA + Q+E+ S+
Sbjct: 15 IMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDE-NVQREIINHRSL 73
Query: 282 RHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN+V + P + ++ EY G L +R+ G R F+ ++ + +
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQ---QLLSGVS 130
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVS--KISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ H + + HRDLK N LLD + KI D G ++ SV S GT
Sbjct: 131 YCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSK-------SSVLHSQPKSTVGT 180
Query: 398 FCYIDPEYQQTGMLTTK-SDIYSFGIMLLQIITARSPM 434
YI PE K +D++S G+ L ++ P
Sbjct: 181 PAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPF 218
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 11 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 70
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 71 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 128 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 176
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 177 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 233
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 19/200 (9%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLL 289
IGEG +G V++G + +P VAIK + + R+ F QE + HP++V L
Sbjct: 18 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 290 LGACPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
+G + ++ E G L L R + + A +++TAL +L +
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLESKR--- 131
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
VHRD+ N+L+ N K+ D GL+R + S ++ + ++ PE
Sbjct: 132 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIK-----WMAPESINF 186
Query: 409 GMLTTKSDIYSFGIMLLQII 428
T+ SD++ FG+ + +I+
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 31/213 (14%)
Query: 237 IGEGGYGPV--YRGKLDHTPVAIKVL-------RPDAAQGKRQFQQEVEVLSSIRHPNMV 287
IG G +G V R K A+K+L R D+A F +E ++++ P +V
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF----FWEERDIMAFANSPWVV 132
Query: 288 LLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L A D Y +V EYM G L + L+ + P W + + AE+ AL +H
Sbjct: 133 QLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPE-KWARFY--TAEVVLALDAIHSMG 188
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+HRD+KP N+LLD++ K++D G + + +A GT YI PE
Sbjct: 189 ---FIHRDVKPDNMLLDKSGHLKLADFGTCMKM-----NKEGMVRCDTAVGTPDYISPEV 240
Query: 406 QQT----GMLTTKSDIYSFGIMLLQIITARSPM 434
++ G + D +S G+ L +++ +P
Sbjct: 241 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 16 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 75
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 76 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 132
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 133 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 181
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 182 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 238
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 15 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 74
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 75 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 132 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARH------- 180
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 181 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 237
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 14 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 73
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 74 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 131 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 179
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 180 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 236
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 11 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 70
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 71 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 128 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLARH------- 176
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 177 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 233
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 8 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 67
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 68 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 124
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 125 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 173
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 174 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 230
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 11 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 70
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 71 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 128 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 176
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 177 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 233
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 21 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 80
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 81 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 138 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 186
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 187 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 243
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V + K H K+ RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D LAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 21 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 80
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 81 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 138 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 186
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 187 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 243
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 97/223 (43%), Gaps = 24/223 (10%)
Query: 237 IGEGGYGPVYRG-----KLDHTPVAIKVLRPDAA-QGKRQFQQEVEVLSSIRHPNMVLLL 290
+GEG +G VY G K + VA+K + D K +F E ++ ++ HP++V L+
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 291 GAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPE 347
G P + ++ E G L L R N+ + + +I A+ +L
Sbjct: 92 GIIEEEPTW--IIMELYPYGELGHYLERNKNSLKV--LTLVLYSLQICKAMAYLESIN-- 145
Query: 348 PLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQ 407
VHRD+ NIL+ K+ D GL+R + + Y + ++ PE
Sbjct: 146 -CVHRDIAVRNILVASPECVKLGDFGLSRYI-----EDEDYYKASVTRLPIKWMSPESIN 199
Query: 408 TGMLTTKSDIYSFGIMLLQIIT-ARSPMGLTHH--VSRAIEKG 447
TT SD++ F + + +I++ + P + V +EKG
Sbjct: 200 FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKG 242
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDAGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 20 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 79
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 80 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 136
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 137 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 185
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 186 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 242
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 31/213 (14%)
Query: 237 IGEGGYGPV--YRGKLDHTPVAIKVL-------RPDAAQGKRQFQQEVEVLSSIRHPNMV 287
IG G +G V R K A+K+L R D+A F +E ++++ P +V
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF----FWEERDIMAFANSPWVV 137
Query: 288 LLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L A D Y +V EYM G L + L+ + P W + + AE+ AL +H
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPE-KWARFY--TAEVVLALDAIHSMG 193
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+HRD+KP N+LLD++ K++D G + + +A GT YI PE
Sbjct: 194 ---FIHRDVKPDNMLLDKSGHLKLADFGTCMKM-----NKEGMVRCDTAVGTPDYISPEV 245
Query: 406 QQT----GMLTTKSDIYSFGIMLLQIITARSPM 434
++ G + D +S G+ L +++ +P
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 116/291 (39%), Gaps = 38/291 (13%)
Query: 218 KYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDH-----TPVAIKVLRPD--AAQGKRQ 270
K +E++ +F+ +G+G +G V +L VA+K+L+ D A+ +
Sbjct: 12 KEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEE 71
Query: 271 FQQEVEVLSSIRHPNMVLLLGACP--------DYGCLVYEYMHNGSLEDRLL--RRGNTP 320
F +E + HP++ L+G ++ +M +G L LL R G P
Sbjct: 72 FLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENP 131
Query: 321 V-IPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVP 379
+P + + +IA + +L +HRDL N +L + ++D GL+R +
Sbjct: 132 FNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
Query: 380 PSVADSVTQYHMTSAAGTFC--YIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSPMGL 436
Y+ A ++ E + T SD+++FG+ + +I+T ++P
Sbjct: 189 SG------DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYA- 241
Query: 437 THHVSRAIEKGTLAE-MLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDL 486
IE + ++ P E E L QC K RP
Sbjct: 242 ------GIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSF 286
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 226 EATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI-R 282
+ TD + IG G Y R K + A+K++ + KR +E+E+L +
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIID----KSKRDPTEEIEILLRYGQ 74
Query: 283 HPNMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF 340
HPN++ L D Y +V E M G L D++LR+ R+ + I + +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ---KFFSEREASAVLFTITKTVEY 131
Query: 341 LHQAKPEPLVHRDLKPANILLDRNYVS--------KISDVGLARLVPPSVADSVTQYHMT 392
LH + +VHRDLKP+NIL YV +I D G A+ + +T +
Sbjct: 132 LH---AQGVVHRDLKPSNIL----YVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-- 182
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
T ++ PE + DI+S G++L ++T +P
Sbjct: 183 ----TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 97/213 (45%), Gaps = 31/213 (14%)
Query: 237 IGEGGYGPV--YRGKLDHTPVAIKVL-------RPDAAQGKRQFQQEVEVLSSIRHPNMV 287
IG G +G V R K A+K+L R D+A F +E ++++ P +V
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAF----FWEERDIMAFANSPWVV 137
Query: 288 LLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
L A D Y +V EYM G L + L+ + P W + + AE+ AL +H
Sbjct: 138 QLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVPE-KWARFY--TAEVVLALDAIHSMG 193
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+HRD+KP N+LLD++ K++D G + + +A GT YI PE
Sbjct: 194 ---FIHRDVKPDNMLLDKSGHLKLADFGTCMKM-----NKEGMVRCDTAVGTPDYISPEV 245
Query: 406 QQT----GMLTTKSDIYSFGIMLLQIITARSPM 434
++ G + D +S G+ L +++ +P
Sbjct: 246 LKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 11 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 70
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 71 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 127
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 128 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 176
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 177 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 15 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 74
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 75 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 132 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 180
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 181 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 237
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 110/259 (42%), Gaps = 25/259 (9%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQ---QEVEVLS-SIRHPNMVLLL 290
+G+G +G V+ + T AIK L+ D + E VLS + HP + +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMF 84
Query: 291 GACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
L + EY++ G L + + R F AAEI L FLH +
Sbjct: 85 CTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS--RATF-YAAEIILGLQFLHS---KG 138
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
+V+RDLK NILLD++ KI+D G+ + + D+ T GT YI PE
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCK--ENMLGDAKT----NXFCGTPDYIAPEILLG 192
Query: 409 GMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDW-PAEAAES 467
D +SFG++L +++ +SP H E M +P W EA +
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSPF----HGQDEEELFHSIRMDNPFYPRWLEKEAKDL 248
Query: 468 FSKLAIQCAELRKKDRPDL 486
KL ++ E R R D+
Sbjct: 249 LVKLFVREPEKRLGVRGDI 267
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 28 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 87
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 88 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 144
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 145 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 193
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 194 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 250
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQ---QEVEVLSSIRHPN 285
F+ M +G+G +G V T AIK+L+ D + E VL+ + P
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 286 MVLLLGAC---PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK------IAAEIAT 336
+ L +C D V EY++ G L + + G +FK AAEI+
Sbjct: 81 FLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVG---------KFKEPQAVFYAAEISI 131
Query: 337 ALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
L FLH+ +++RDLK N++LD KI+D G+ + + D VT G
Sbjct: 132 GLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK---EHMMDGVTT---REFCG 182
Query: 397 TFCYIDPE---YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
T YI PE YQ G D +++G++L +++ + P
Sbjct: 183 TPDYIAPEIIAYQPYG---KSVDWWAYGVLLYEMLAGQPPF 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 29 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 88
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 89 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 145
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 146 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 194
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 195 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 251
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 18/220 (8%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGK--LDHTPVAIKVLRPDAAQGKRQFQQEVEVLSS 280
E + D+ + + +G+G YG VY G+ + +AIK + ++ + +E+ +
Sbjct: 16 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 75
Query: 281 IRHPNMVLLLGACPDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKI-AAEIATA 337
++H N+V LG+ + G + E + GSL LLR P+ + +I
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS-ALLRSKWGPLKDNEQTIGFYTKQILEG 134
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDR-NYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
L +LH + +VHRD+K N+L++ + V KISD G ++ + + + T+ + G
Sbjct: 135 LKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTE----TFTG 185
Query: 397 TFCYIDPEYQQTG--MLTTKSDIYSFGIMLLQIITARSPM 434
T Y+ PE G +DI+S G ++++ T + P
Sbjct: 186 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 255 VAIKVLRPDAAQGKR-QFQQEVEVLSSIRHPNMVLLLGA--CPDYGCLVYEYMHNGSLED 311
VAIK + + Q + +E++ +S HPN+V + D LV + + GS+ D
Sbjct: 43 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 102
Query: 312 ---RLLRRG--NTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYV 366
++ +G + V+ I E+ L +LH+ +HRD+K NILL +
Sbjct: 103 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 159
Query: 367 SKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY-QQTGMLTTKSDIYSFGIMLL 425
+I+D G++ + D + GT C++ PE +Q K+DI+SFGI +
Sbjct: 160 VQIADFGVSAFLATG-GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 218
Query: 426 QIITARSP 433
++ T +P
Sbjct: 219 ELATGAAP 226
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 127
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 32 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 91
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 92 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 148
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 149 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 197
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 198 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 254
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 91/200 (45%), Gaps = 19/200 (9%)
Query: 237 IGEGGYGPVYRGKLDHTP------VAIKVLRPDAAQGKRQ-FQQEVEVLSSIRHPNMVLL 289
IGEG +G V++G + +P VAIK + + R+ F QE + HP++V L
Sbjct: 18 IGEGQFGDVHQG-IYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 290 LGACPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
+G + ++ E G L L R + + A +++TAL +L +
Sbjct: 77 IGVITENPVWIIMELCTLGELRSFLQVRKFS--LDLASLILYAYQLSTALAYLESKR--- 131
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
VHRD+ N+L+ K+ D GL+R + S T Y + ++ PE
Sbjct: 132 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS-----TYYKASKGKLPIKWMAPESINF 186
Query: 409 GMLTTKSDIYSFGIMLLQII 428
T+ SD++ FG+ + +I+
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 14 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 73
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 74 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 130
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 131 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 179
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 180 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 236
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 105/260 (40%), Gaps = 57/260 (21%)
Query: 226 EATDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQF--------QQEVEV 277
E K+ IG+G YG V R +++ AI+ ++ RQ + EV +
Sbjct: 23 ELQKKYHLKGAIGQGSYG-VVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRL 81
Query: 278 LSSIRHPNMVLLLGACPD--YGCLVYEYMHNGSLEDRL------------LRRGNTPVIP 323
+ + HPN+ L D Y CLV E H G L D+L + T + P
Sbjct: 82 MKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 324 ---------------WRKRF----------KIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
+R+ I +I +AL +LH + + HRD+KP N
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPEN 198
Query: 359 ILLDRN--YVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTT--K 414
L N + K+ D GL++ ++ Y MT+ AGT ++ PE T + K
Sbjct: 199 FLFSTNKSFEIKLVDFGLSKEFYK--LNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256
Query: 415 SDIYSFGIMLLQIITARSPM 434
D +S G++L ++ P
Sbjct: 257 CDAWSAGVLLHLLLMGAVPF 276
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 15 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 74
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 75 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 131
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 132 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 180
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 181 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 237
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 6 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 65
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 66 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 122
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 123 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 171
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 172 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 228
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 101/226 (44%), Gaps = 12/226 (5%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQ-FQQEVEVLS 279
++ + +++ IGEG YG V ++ VAIK + P Q Q +E+++L
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILL 96
Query: 280 SIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATA 337
RH N++ + + P + Y+ + L + T + +I
Sbjct: 97 RFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLYQILRG 156
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
L ++H A ++HRDLKP+N+LL+ KI D GLAR+ P D +T T
Sbjct: 157 LKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADP---DHDHTGFLTEYVAT 210
Query: 398 FCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
Y PE TKS DI+S G +L ++++ R H++ +
Sbjct: 211 RWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQ 256
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 6 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 65
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 66 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 122
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 123 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 171
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 172 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 228
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 105/239 (43%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V Y K K+ RP KR
Sbjct: 38 YRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRT 97
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 98 YR-ELRLLKHMKHENVIGLLDVFTPATSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 154
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 155 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 203
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGM-LTTKSDIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M DI+S G ++ +++T R+ T H+++
Sbjct: 204 --TDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQ 260
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 73
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 127
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 136/284 (47%), Gaps = 45/284 (15%)
Query: 226 EATDKFSEAMKIGEGGYGPVYRGKLDHT--PVAIK-VLRPDAAQG-KRQFQQEVEVLSSI 281
+ K+ + KIG+G +G V++ + T VA+K VL + +G +E+++L +
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 282 RHPNMVLLLGAC-----PDYGC-----LVYEYMHN---GSLEDRLLRRGNTPVIPWRKRF 328
+H N+V L+ C P C LV+++ + G L + L++ + + KR
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI----KR- 129
Query: 329 KIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQ 388
+ + L ++H+ K ++HRD+K AN+L+ R+ V K++D GLAR S+A +
Sbjct: 130 -VMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF--SLAKNSQP 183
Query: 389 YHMTSAAGTFCYIDPEYQQTGMLTTKS-----DIYSFGIMLLQIITARSPM--GLTHHVS 441
+ T Y PE +L + D++ G ++ ++ T RSP+ G T
Sbjct: 184 NRYXNRVVTLWYRPPEL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
Query: 442 RAIEKGTLAEMLDPAVTDWP-AEAAESFSKLAIQCAELRK-KDR 483
A+ L + P V WP + E + KL + + RK KDR
Sbjct: 239 LAL-ISQLCGSITPEV--WPNVDNYELYEKLELVKGQKRKVKDR 279
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHR 74
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 128
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMXGTLPYVAPELL 179
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 5 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 64
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 65 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 121
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 122 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 170
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 171 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 7 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 66
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 67 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 123
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 124 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 172
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 173 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 229
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 80/152 (52%), Gaps = 21/152 (13%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVL----RPDAAQG-KRQFQQEVEVLSSIRHPNMVLL 289
+GEG + VY+ + +T VAIK + R +A G R +E+++L + HPN++ L
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 290 LGACPDYG-----CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQA 344
L A +G LV+++M + ++ + N+ V+ L +LHQ
Sbjct: 78 LDA---FGHKSNISLVFDFMET---DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ- 130
Query: 345 KPEPLVHRDLKPANILLDRNYVSKISDVGLAR 376
++HRDLKP N+LLD N V K++D GLA+
Sbjct: 131 --HWILHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 93/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + + H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 128
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 255 VAIKVLRPDAAQGKR-QFQQEVEVLSSIRHPNMVLLLGA--CPDYGCLVYEYMHNGSLED 311
VAIK + + Q + +E++ +S HPN+V + D LV + + GS+ D
Sbjct: 38 VAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLD 97
Query: 312 ---RLLRRG--NTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYV 366
++ +G + V+ I E+ L +LH+ +HRD+K NILL +
Sbjct: 98 IIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGS 154
Query: 367 SKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY-QQTGMLTTKSDIYSFGIMLL 425
+I+D G++ + D + GT C++ PE +Q K+DI+SFGI +
Sbjct: 155 VQIADFGVSAFLATG-GDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 213
Query: 426 QIITARSP 433
++ T +P
Sbjct: 214 ELATGAAP 221
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 127
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 136/284 (47%), Gaps = 45/284 (15%)
Query: 226 EATDKFSEAMKIGEGGYGPVYRGKLDHT--PVAIK-VLRPDAAQG-KRQFQQEVEVLSSI 281
+ K+ + KIG+G +G V++ + T VA+K VL + +G +E+++L +
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 282 RHPNMVLLLGAC-----PDYGC-----LVYEYMHN---GSLEDRLLRRGNTPVIPWRKRF 328
+H N+V L+ C P C LV+++ + G L + L++ + + KR
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEI----KR- 129
Query: 329 KIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQ 388
+ + L ++H+ K ++HRD+K AN+L+ R+ V K++D GLAR S+A +
Sbjct: 130 -VMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF--SLAKNSQP 183
Query: 389 YHMTSAAGTFCYIDPEYQQTGMLTTKS-----DIYSFGIMLLQIITARSPM--GLTHHVS 441
+ T Y PE +L + D++ G ++ ++ T RSP+ G T
Sbjct: 184 NRYXNRVVTLWYRPPEL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
Query: 442 RAIEKGTLAEMLDPAVTDWP-AEAAESFSKLAIQCAELRK-KDR 483
A+ L + P V WP + E + KL + + RK KDR
Sbjct: 239 LAL-ISQLCGSITPEV--WPNVDNYELYEKLELVKGQKRKVKDR 279
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 136/284 (47%), Gaps = 45/284 (15%)
Query: 226 EATDKFSEAMKIGEGGYGPVYRGKLDHT--PVAIK-VLRPDAAQG-KRQFQQEVEVLSSI 281
+ K+ + KIG+G +G V++ + T VA+K VL + +G +E+++L +
Sbjct: 15 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 74
Query: 282 RHPNMVLLLGAC-----PDYGC-----LVYEYMHN---GSLEDRLLRRGNTPVIPWRKRF 328
+H N+V L+ C P C LV+++ + G L + L++ + + KR
Sbjct: 75 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI----KR- 129
Query: 329 KIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQ 388
+ + L ++H+ K ++HRD+K AN+L+ R+ V K++D GLAR S+A +
Sbjct: 130 -VMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF--SLAKNSQP 183
Query: 389 YHMTSAAGTFCYIDPEYQQTGMLTTKS-----DIYSFGIMLLQIITARSPM--GLTHHVS 441
+ T Y PE +L + D++ G ++ ++ T RSP+ G T
Sbjct: 184 NRYXNRVVTLWYRPPEL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
Query: 442 RAIEKGTLAEMLDPAVTDWP-AEAAESFSKLAIQCAELRK-KDR 483
A+ L + P V WP + E + KL + + RK KDR
Sbjct: 239 LAL-ISQLCGSITPEV--WPNVDNYELYEKLELVKGQKRKVKDR 279
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 72
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 73 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 126
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 127 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 177
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 178 KRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 128
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDRGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 128
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 128
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVLR--PDAAQGKRQFQQEVEVLSSIRHPNMVLLLGA 292
+G G G V++ + T +A+K +R + + KR VL S P +V G
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 293 CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHR 352
+ G+ ++L +R P IP R K+ I AL +L + ++HR
Sbjct: 93 FITNTDVFIAMELMGTCAEKLKKRMQGP-IPERILGKMTVAIVKALYYLKEK--HGVIHR 149
Query: 353 DLKPANILLDRNYVSKISDVGLA-RLVPPSVADSVTQYHMTSAAGTFCY-----IDPEYQ 406
D+KP+NILLD K+ D G++ RLV D +AG Y IDP
Sbjct: 150 DVKPSNILLDERGQIKLCDFGISGRLVDDKAKD--------RSAGCAAYMAPERIDPPDP 201
Query: 407 QTGMLTTKSDIYSFGIMLLQIITARSP 433
++D++S GI L+++ T + P
Sbjct: 202 TKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 128
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 127
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 136/284 (47%), Gaps = 45/284 (15%)
Query: 226 EATDKFSEAMKIGEGGYGPVYRGKLDHT--PVAIK-VLRPDAAQG-KRQFQQEVEVLSSI 281
+ K+ + KIG+G +G V++ + T VA+K VL + +G +E+++L +
Sbjct: 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLL 73
Query: 282 RHPNMVLLLGAC-----PDYGC-----LVYEYMHN---GSLEDRLLRRGNTPVIPWRKRF 328
+H N+V L+ C P C LV+++ + G L + L++ + + KR
Sbjct: 74 KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEI----KR- 128
Query: 329 KIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQ 388
+ + L ++H+ K ++HRD+K AN+L+ R+ V K++D GLAR S+A +
Sbjct: 129 -VMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAF--SLAKNSQP 182
Query: 389 YHMTSAAGTFCYIDPEYQQTGMLTTKS-----DIYSFGIMLLQIITARSPM--GLTHHVS 441
+ T Y PE +L + D++ G ++ ++ T RSP+ G T
Sbjct: 183 NRYXNRVVTLWYRPPEL----LLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 237
Query: 442 RAIEKGTLAEMLDPAVTDWP-AEAAESFSKLAIQCAELRK-KDR 483
A+ L + P V WP + E + KL + + RK KDR
Sbjct: 238 LAL-ISQLCGSITPEV--WPNVDNYELYEKLELVKGQKRKVKDR 278
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 127
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L +P KR
Sbjct: 21 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRT 80
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 81 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 137
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 138 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 186
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 187 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 243
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 128
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDGGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 96/207 (46%), Gaps = 17/207 (8%)
Query: 237 IGEGGYGPVYRGKLDHTP----VAIKVLRP-DAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
+GEG YG V H P VAIK + P D + +E+++L +H N++ +
Sbjct: 19 LGEGAYGVVCSAT--HKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFN 76
Query: 292 AC-PD-YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
PD + Y+ ++ L R +T ++ + A+ LH + +
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSN---V 133
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSV----TQYHMTSAAGTFCYIDPEY 405
+HRDLKP+N+L++ N K+ D GLAR++ S AD+ Q M T Y PE
Sbjct: 134 IHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEV 193
Query: 406 QQTGMLTTKS-DIYSFGIMLLQIITAR 431
T +++ D++S G +L ++ R
Sbjct: 194 MLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 18/220 (8%)
Query: 223 EIEEATDKFSEAMKIGEGGYGPVYRGK--LDHTPVAIKVLRPDAAQGKRQFQQEVEVLSS 280
E + D+ + + +G+G YG VY G+ + +AIK + ++ + +E+ +
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 61
Query: 281 IRHPNMVLLLGACPDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKI-AAEIATA 337
++H N+V LG+ + G + E + GSL LLR P+ + +I
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS-ALLRSKWGPLKDNEQTIGFYTKQILEG 120
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDR-NYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
L +LH + +VHRD+K N+L++ + V KISD G ++ + + + T+ + G
Sbjct: 121 LKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRL--AGINPCTE----TFTG 171
Query: 397 TFCYIDPEYQQTG--MLTTKSDIYSFGIMLLQIITARSPM 434
T Y+ PE G +DI+S G ++++ T + P
Sbjct: 172 TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 127
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 127
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 128
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 129 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 179
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 180 KRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 127
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 127
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 127
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 111/252 (44%), Gaps = 26/252 (10%)
Query: 237 IGE-GGYGPVYRGKLDHTPV--AIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
IGE G +G VY+ + T V A KV+ + + + E+++L+S HPN+V LL A
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF 76
Query: 294 --PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ ++ E+ G++ D ++ P+ + + + + AL +LH K ++H
Sbjct: 77 YYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQV-VCKQTLDALNYLHDNK---IIH 131
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-MTSAAGTFCYIDPEYQQTGM 410
RDLK NIL + K++D G+ S ++ T S GT ++ PE
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGV------SAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 411 -----LTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPAVTDWPAEAA 465
K+D++S GI L+++ P HH + +P P+ +
Sbjct: 186 SKDRPYDYKADVWSLGITLIEMAEIEPP----HHELNPMRVLLKIAKSEPPTLAQPSRWS 241
Query: 466 ESFSKLAIQCAE 477
+F +C E
Sbjct: 242 SNFKDFLKKCLE 253
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 229 DKFSEAMKIGEGGYGPVY------RGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIR 282
D F + +G GG+G V+ GKL + + R +G + E ++L+ +
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKL-YACKKLNKKRLKKRKGYQGAMVEKKILAKV- 242
Query: 283 HPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRG-NTPVIPWRKRFKIAAEIATAL 338
H ++ L + CLV M+ G + + + P + A+I + L
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 339 LFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTF 398
LHQ +++RDLKP N+LLD + +ISD+GLA V Q AGT
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA------VELKAGQTKTKGYAGTP 353
Query: 399 CYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
++ PE D ++ G+ L ++I AR P
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F IG G +G V K T A+K+L +Q + E +L ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EYM G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ K++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 229 DKFSEAMKIGEGGYGPVY------RGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIR 282
D F + +G GG+G V+ GKL + + R +G + E ++L+ +
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKL-YACKKLNKKRLKKRKGYQGAMVEKKILAKV- 242
Query: 283 HPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRG-NTPVIPWRKRFKIAAEIATAL 338
H ++ L + CLV M+ G + + + P + A+I + L
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 339 LFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTF 398
LHQ +++RDLKP N+LLD + +ISD+GLA V Q AGT
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA------VELKAGQTKTKGYAGTP 353
Query: 399 CYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
++ PE D ++ G+ L ++I AR P
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F IG G +G V K T A+K+L +Q + E +L ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EYM G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ K++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 229 DKFSEAMKIGEGGYGPVY------RGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIR 282
D F + +G GG+G V+ GKL + + R +G + E ++L+ +
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKL-YACKKLNKKRLKKRKGYQGAMVEKKILAKV- 242
Query: 283 HPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRG-NTPVIPWRKRFKIAAEIATAL 338
H ++ L + CLV M+ G + + + P + A+I + L
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 339 LFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTF 398
LHQ +++RDLKP N+LLD + +ISD+GLA V Q AGT
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA------VELKAGQTKTKGYAGTP 353
Query: 399 CYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
++ PE D ++ G+ L ++I AR P
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG YG V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 127
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMXGTLPYVAPELL 178
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 93/216 (43%), Gaps = 21/216 (9%)
Query: 229 DKFSEAMKIGEGGYGPVY------RGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIR 282
D F + +G GG+G V+ GKL + + R +G + E ++L+ +
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKL-YACKKLNKKRLKKRKGYQGAMVEKKILAKV- 242
Query: 283 HPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRG-NTPVIPWRKRFKIAAEIATAL 338
H ++ L + CLV M+ G + + + P + A+I + L
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 339 LFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTF 398
LHQ +++RDLKP N+LLD + +ISD+GLA V Q AGT
Sbjct: 303 EHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLA------VELKAGQTKTKGYAGTP 353
Query: 399 CYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
++ PE D ++ G+ L ++I AR P
Sbjct: 354 GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKSQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GL R
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCRH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 32 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 91
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 92 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 148
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI D GLAR
Sbjct: 149 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARH------- 197
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T M T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 198 --TDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 254
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 235 MKIGEGGYGPVYRGKLDHT--PVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGA 292
+KIGEG G V + H+ VA+K++ Q + EV ++ +H N+V + +
Sbjct: 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 293 --CPDYGCLVYEYMHNGSLEDRLLR-RGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
+ ++ E++ G+L D + + R N I + + AL +LH + +
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIA-----TVCEAVLQALAYLH---AQGV 162
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRD+K +ILL + K+SD G + V GT ++ PE
Sbjct: 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR------KXLVGTPYWMAPEVISRS 216
Query: 410 MLTTKSDIYSFGIMLLQIITARSP 433
+ T+ DI+S GIM+++++ P
Sbjct: 217 LYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 22/172 (12%)
Query: 272 QQEVEVLSSIR-HPNMVLLLGA--CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRF 328
++E +L + HP+++ L+ + + LV++ M G L D L + + ++
Sbjct: 147 RRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK---VALSEKETR 203
Query: 329 KIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQ 388
I + A+ FLH +VHRDLKP NILLD N ++SD G + + P
Sbjct: 204 SIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEK----- 255
Query: 389 YHMTSAAGTFCYIDPEYQQTGMLTT------KSDIYSFGIMLLQIITARSPM 434
+ GT Y+ PE + M T + D+++ G++L ++ P
Sbjct: 256 --LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 90/208 (43%), Gaps = 19/208 (9%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHT--PVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
+ +KIGEG G V HT VA+K + Q + EV ++ H N+V
Sbjct: 47 LANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVD 106
Query: 289 LLGA--CPDYGCLVYEYMHNGSLEDRLLR-RGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
+ + D +V E++ G+L D + R N I + + AL +LH
Sbjct: 107 MYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLHN-- 159
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ ++HRD+K +ILL + K+SD G V V GT ++ PE
Sbjct: 160 -QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR------KXLVGTPYWMAPEV 212
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
T+ DI+S GIM++++I P
Sbjct: 213 ISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 273 QEVEVLSSIR-HPNMVLLLGA--CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
+EV++L + HPN++ L + LV++ M G L D L + RK +
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQY 389
E+ AL L+ +VHRDLKP NILLD + K++D G + + P
Sbjct: 132 ALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK------ 179
Query: 390 HMTSAAGTFCYIDPEYQQTGM------LTTKSDIYSFGIMLLQIITARSPM 434
+ S GT Y+ PE + M + D++S G+++ ++ P
Sbjct: 180 -LRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 111/254 (43%), Gaps = 44/254 (17%)
Query: 230 KFSEAMKIGEGGYGPVYRGKL--DHTPVAIKVLR-PDAAQG-KRQFQQEVEVLSSIRHPN 285
K+ + KIGEG YG V++ K H VA+K +R D +G +E+ +L ++H N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 286 MVLLLGACPDYG--CLVYEYMH----------NGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
+V L LV+E+ NG L+ +++ +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK-------------SFLFQ 109
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
+ L F H ++HRDLKP N+L++RN K++D GLAR A + ++
Sbjct: 110 LLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLAR------AFGIPVRCYSA 160
Query: 394 AAGTFCYIDPEYQQTGML-TTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEK-----G 447
T Y P+ L +T D++S G + ++ A P+ + V +++ G
Sbjct: 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLG 220
Query: 448 TLAEMLDPAVTDWP 461
T E P++T P
Sbjct: 221 TPTEEQWPSMTKLP 234
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 107/239 (44%), Gaps = 28/239 (11%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVL-RP--DAAQGKRQ 270
YR+ + I E +++ +G G YG V T VA+K L RP KR
Sbjct: 9 YRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRT 68
Query: 271 FQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRK---- 326
++ E+ +L ++H N++ LL L E ++ L L+ ++ +K
Sbjct: 69 YR-ELRLLKHMKHENVIGLLDVFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDD 125
Query: 327 --RFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVAD 384
+F I +I L ++H A ++HRDLKP+N+ ++ + KI GLAR
Sbjct: 126 HVQFLIY-QILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILGFGLARH------- 174
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
T MT T Y PE M ++ DI+S G ++ +++T R+ T H+ +
Sbjct: 175 --TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 231
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V AGT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLAGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 33/222 (14%)
Query: 226 EATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI-R 282
+ TD + IG G Y R K + A+K++ + KR +E+E+L +
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIID----KSKRDPTEEIEILLRYGQ 74
Query: 283 HPNMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF 340
HPN++ L D Y +V E G L D++LR+ R+ + I + +
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ---KFFSEREASAVLFTITKTVEY 131
Query: 341 LHQAKPEPLVHRDLKPANILLDRNYVS--------KISDVGLARLVPPSVADSVTQYHMT 392
LH + +VHRDLKP+NIL YV +I D G A+ + +
Sbjct: 132 LH---AQGVVHRDLKPSNIL----YVDESGNPESIRICDFGFAKQL------RAENGLLX 178
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ T ++ PE + DI+S G++L +T +P
Sbjct: 179 TPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ Q+ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 237 IGEGGYGPVYRGKLDHTPV--AIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGACP 294
IG G +G V T + A K + + +F+QE+E++ S+ HPN++ L
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 76
Query: 295 DYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHR 352
D LV E G L +R++ + V +I ++ +A+ + H+ + HR
Sbjct: 77 DNTDIYLVMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKLN---VAHR 130
Query: 353 DLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
DLKP N L + K+ D GLA P M + GT Y+ P+ + G
Sbjct: 131 DLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-------MRTKVGTPYYVSPQVLE-G 182
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
+ + D +S G+M+ ++ P
Sbjct: 183 LYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 92/215 (42%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 176
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V + + GT
Sbjct: 177 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGAT---------WTLCGTPE 224
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 90/205 (43%), Gaps = 21/205 (10%)
Query: 237 IGEGGYGPVYRGKLDHTPV--AIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGACP 294
IG G +G V T + A K + + +F+QE+E++ S+ HPN++ L
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE 93
Query: 295 DYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHR 352
D LV E G L +R++ + V +I ++ +A+ + H+ + HR
Sbjct: 94 DNTDIYLVMELCTGGELFERVVHKR---VFRESDAARIMKDVLSAVAYCHKLN---VAHR 147
Query: 353 DLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
DLKP N L + K+ D GLA P M + GT Y+ P+ + G
Sbjct: 148 DLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM-------MRTKVGTPYYVSPQVLE-G 199
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
+ + D +S G+M+ ++ P
Sbjct: 200 LYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F IG G +G V K T A+K+L +Q + E +L ++
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ K++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 92/212 (43%), Gaps = 35/212 (16%)
Query: 237 IGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIR-HPNMVLLLGAC 293
+GEG + + K + A+K++ + + + Q+E+ L HPN+V L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKII---SKRMEANTQKEITALKLCEGHPNIVKLHEVF 75
Query: 294 PD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK------IAAEIATALLFLHQAK 345
D + LV E ++ G L +R+ ++ K F I ++ +A+ +H
Sbjct: 76 HDQLHTFLVMELLNGGELFERIKKK---------KHFSETEASYIMRKLVSAVSHMHDVG 126
Query: 346 PEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYID 402
+VHRDLKP N+L + N KI D G ARL PP + + T Y
Sbjct: 127 ---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD------NQPLKTPCFTLHYAA 177
Query: 403 PEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
PE D++S G++L +++ + P
Sbjct: 178 PELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 24/211 (11%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQF---QQEVEVL-SSIRHPNMVLLL 290
IG G Y V +L T A+KV++ + Q E V + HP +V L
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 291 GACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
L + EY++ G L + R+ P RF +AEI+ AL +LH+
Sbjct: 88 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP--EEHARF-YSAEISLALNYLHE---RG 141
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLAR--LVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
+++RDLK N+LLD K++D G+ + L P D+ + + GT YI PE
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---GDTTSXF-----CGTPNYIAPEIL 193
Query: 407 QTGMLTTKSDIYSFGIMLLQIITARSPMGLT 437
+ D ++ G+++ +++ RSP +
Sbjct: 194 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 224
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 102/222 (45%), Gaps = 34/222 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYR--GKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRH-PN 285
D + K+G G Y V+ ++ V +K+L+P K + ++E+++L ++R PN
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKNKIKREIKILENLRGGPN 93
Query: 286 MVLLLGACPD----YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
++ L D LV+E+++N ++ + + RF + EI AL +
Sbjct: 94 IITLADIVKDPVSRTPALVFEHVNNTDF-----KQLYQTLTDYDIRFYMY-EILKALDYC 147
Query: 342 HQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARLVPPSVADSVTQYHMTSAAGTFCY 400
H ++HRD+KP N+++D + ++ D GLA P +Y++ A+ F
Sbjct: 148 HSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPG-----QEYNVRVASRYFK- 198
Query: 401 IDPE----YQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTH 438
PE YQ M D++S G ML +I + P H
Sbjct: 199 -GPELLVDYQ---MYDYSLDMWSLGCMLASMIFRKEPFFHGH 236
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 28/270 (10%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGK-----LDHTPVAIKVLRPDAAQ---GKRQF 271
T+ E D + ++G G + V + + L + IK R +++ +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
++EV +L I+HPN++ L + L+ E + G L D L + + + + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATE 118
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADS 385
+I + +LH + + H DLKP NI LLDRN KI D GLA + D
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DF 170
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP-MGLTHHVSRAI 444
++ + GT ++ PE L ++D++S G++ +++ SP +G T + A
Sbjct: 171 GNEFK--NIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 445 EKGTLAEMLDPAVTDWPAEAAESFSKLAIQ 474
E D ++ A A + +L ++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 114/244 (46%), Gaps = 32/244 (13%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVL-RPDAAQ--GKRQ 270
YR+ + E + + +G G YG V T VAIK L RP ++ KR
Sbjct: 12 YRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRA 71
Query: 271 FQQEVEVLSSIRHPNMVLLLGA-CPDYGC-------LVYEYMHNGSLEDRLLRRGNTPVI 322
++ E+ +L +RH N++ LL PD LV +M G+ +L++ + +
Sbjct: 72 YR-ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMK--HEKLG 126
Query: 323 PWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSV 382
R +F + ++ L ++H A ++HRDLKP N+ ++ + KI D GLAR
Sbjct: 127 EDRIQF-LVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----Q 177
Query: 383 ADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVS 441
ADS M T Y PE M T++ DI+S G ++ ++IT ++ + H+
Sbjct: 178 ADS----EMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD 233
Query: 442 RAIE 445
+ E
Sbjct: 234 QLKE 237
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 39/259 (15%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGK---RQFQQEVEVLSSIRH 283
D F IG+G +G V + + T A+K + + R +E++++ + H
Sbjct: 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEH 74
Query: 284 PNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK------IAAEIA 335
P +V L + D +V + + G L L + + FK E+
Sbjct: 75 PFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH---------FKEETVKLFICELV 125
Query: 336 TALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
AL +L + ++HRD+KP NILLD + I+D +A ++P + +T+ A
Sbjct: 126 MALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLP-------RETQITTMA 175
Query: 396 GTFCYIDPEY---QQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEM 452
GT Y+ PE ++ + D +S G+ +++ R P +H+ + +
Sbjct: 176 GTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP----YHIRSSTSSKEIVHT 231
Query: 453 LDPAVTDWPAEAAESFSKL 471
+ V +P+ ++ L
Sbjct: 232 FETTVVTYPSAWSQEMVSL 250
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 228 TDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI-RHP 284
+D + IG G Y R K + A+KV+ + KR +E+E+L +HP
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVID----KSKRDPSEEIEILLRYGQHP 81
Query: 285 NMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH 342
N++ L D + LV E M G L D++LR+ R+ + I + +LH
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ---KFFSEREASFVLHTIGKTVEYLH 138
Query: 343 QAKPEPLVHRDLKPANILLDRNYVS--------KISDVGLARLVPPSVADSVTQYHMTSA 394
+ +VHRDLKP+NIL YV +I D G A+ + +T +
Sbjct: 139 S---QGVVHRDLKPSNIL----YVDESGNPECLRICDFGFAKQLRAENGLLMTPCY---- 187
Query: 395 AGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
T ++ PE + DI+S GI+L ++ +P
Sbjct: 188 --TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 22/171 (12%)
Query: 273 QEVEVLSSIR-HPNMVLLLGA--CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
+EV++L + HPN++ L + LV++ M G L D L + RK +
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 131
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQY 389
E+ AL L+ +VHRDLKP NILLD + K++D G + + P
Sbjct: 132 ALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK------ 179
Query: 390 HMTSAAGTFCYIDPEYQQTGM------LTTKSDIYSFGIMLLQIITARSPM 434
+ GT Y+ PE + M + D++S G+++ ++ P
Sbjct: 180 -LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 134/294 (45%), Gaps = 52/294 (17%)
Query: 230 KFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVLRPDAAQGKRQFQQ---EVEVLSSIR-H 283
K+ K+G+G YG V++ T VA+K + DA Q Q+ E+ +L+ + H
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF-DAFQNSTDAQRTFREIMILTELSGH 68
Query: 284 PNMVLLLG---ACPDYGC-LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
N+V LL A D LV++YM + + R N + P K++ + ++ +
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMET---DLHAVIRANI-LEPVHKQY-VVYQLIKVIK 123
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARL----------VPPSVADSVTQY 389
+LH L+HRD+KP+NILL+ K++D GL+R +P S+ ++ +
Sbjct: 124 YLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENF 180
Query: 390 H-----MTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSRA 443
+T T Y PE TK D++S G +L +I+ + P+
Sbjct: 181 DDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK-PIFPGSSTMNQ 239
Query: 444 IEKGTLAEMLDPAVTDWPA-EAAES----FSKLAIQC----AELRKKDRPDLGT 488
+E+ V D+P+ E ES F+K I+ E+R+ ++ D+ T
Sbjct: 240 LERII-------GVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFT 286
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 22/171 (12%)
Query: 273 QEVEVLSSIR-HPNMVLLLGA--CPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
+EV++L + HPN++ L + LV++ M G L D L + RK +
Sbjct: 59 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMR 118
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQY 389
E+ AL L+ +VHRDLKP NILLD + K++D G + + P
Sbjct: 119 ALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK------ 166
Query: 390 HMTSAAGTFCYIDPEYQQTGM------LTTKSDIYSFGIMLLQIITARSPM 434
+ GT Y+ PE + M + D++S G+++ ++ P
Sbjct: 167 -LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 33/220 (15%)
Query: 228 TDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI-RHP 284
+D + IG G Y R K + A+KV+ + KR +E+E+L +HP
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVID----KSKRDPSEEIEILLRYGQHP 81
Query: 285 NMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH 342
N++ L D + LV E M G L D++LR+ R+ + I + +LH
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ---KFFSEREASFVLHTIGKTVEYLH 138
Query: 343 QAKPEPLVHRDLKPANILLDRNYVS--------KISDVGLARLVPPSVADSVTQYHMTSA 394
+ +VHRDLKP+NIL YV +I D G A+ + +T +
Sbjct: 139 S---QGVVHRDLKPSNIL----YVDESGNPECLRICDFGFAKQLRAENGLLMTPCY---- 187
Query: 395 AGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
T ++ PE + DI+S GI+L ++ +P
Sbjct: 188 --TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 26/208 (12%)
Query: 237 IGEGGYGPVYR--GKLDHTPVAIKVL-RPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
+GEG G V ++ VA+K++ A ++E+ + + H N+V G
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 294 PDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVH 351
+ L EY G L DR+ P P +RF ++ +++LH + H
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPDIGMPE-PDAQRF--FHQLMAGVVYLHGIG---ITH 127
Query: 352 RDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYH-----MTSAAGTFCYIDPE-Y 405
RD+KP N+LLD KISD GLA +V +Y+ + GT Y+ PE
Sbjct: 128 RDIKPENLLLDERDNLKISDFGLA---------TVFRYNNRERLLNKMCGTLPYVAPELL 178
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
++ D++S GI+L ++ P
Sbjct: 179 KRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 44/254 (17%)
Query: 230 KFSEAMKIGEGGYGPVYRGKL--DHTPVAIKVLR-PDAAQG-KRQFQQEVEVLSSIRHPN 285
K+ + KIGEG YG V++ K H VA+K +R D +G +E+ +L ++H N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 286 MVLLLGACPDYG--CLVYEYMH----------NGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
+V L LV+E+ NG L+ +++ +
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK-------------SFLFQ 109
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTS 393
+ L F H ++HRDLKP N+L++RN K+++ GLAR A + ++
Sbjct: 110 LLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLAR------AFGIPVRCYSA 160
Query: 394 AAGTFCYIDPEYQQTGML-TTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEK-----G 447
T Y P+ L +T D++S G + ++ A P+ + V +++ G
Sbjct: 161 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLG 220
Query: 448 TLAEMLDPAVTDWP 461
T E P++T P
Sbjct: 221 TPTEEQWPSMTKLP 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 156
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 204
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 156
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 204
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 9/109 (8%)
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQY 389
I +IA A+ FLH L+HRDLKP+NI + V K+ D GL + +
Sbjct: 169 IFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 225
Query: 390 HMTSAA------GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARS 432
M + A GT Y+ PE + K DI+S G++L +++ + S
Sbjct: 226 PMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFS 274
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 156
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 204
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 156
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 204
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLXGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 156
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V + GT
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WTLCGTPE 204
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 176
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 177 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 224
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 24/211 (11%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQF---QQEVEVL-SSIRHPNMVLLL 290
IG G Y V +L T A+KV++ + Q E V + HP +V L
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 291 GACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
L + EY++ G L + R+ P RF +AEI+ AL +LH+
Sbjct: 73 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP--EEHARF-YSAEISLALNYLHERG--- 126
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLAR--LVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
+++RDLK N+LLD K++D G+ + L P D+ + + GT YI PE
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---GDTTSXF-----CGTPNYIAPEIL 178
Query: 407 QTGMLTTKSDIYSFGIMLLQIITARSPMGLT 437
+ D ++ G+++ +++ RSP +
Sbjct: 179 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 209
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY G + L R G + P RF AA+I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 156
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+++D+ K++D G A+ V GT
Sbjct: 157 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---------WXLCGTPE 204
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 148
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 149 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 196
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G P RF AA+I
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP----HARF-YAAQIVLTFE 150
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 151 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 198
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 199 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 108/258 (41%), Gaps = 31/258 (12%)
Query: 266 QGKRQFQQEVEVLSSIRHPNMVLLLGACPD------YGCLVYEYMHNGSLEDRLLRRGNT 319
G+ ++E+++L +RH N++ L+ + Y +V EY G E +L
Sbjct: 48 NGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMY--MVMEYCVCGMQE--MLDSVPE 103
Query: 320 PVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVP 379
P + ++ L +LH + +VH+D+KP N+LL KIS +G+A +
Sbjct: 104 KRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160
Query: 380 PSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLT---TKSDIYSFGIMLLQIITARSPM-- 434
P AD + S A P G+ T K DI+S G+ L I T P
Sbjct: 161 PFAADDTCRTSQGSPA-----FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215
Query: 435 GLTHHVSRAIEKGTLAEMLD--PAVTD-----WPAEAAESFSKLAI-QCAELRKKDRPDL 486
+ + I KG+ A D P ++D E A+ FS I Q + RKK P
Sbjct: 216 DNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAE 275
Query: 487 GTVIVPELNRLKDLGRKL 504
V +P KD R +
Sbjct: 276 APVPIPPSPDTKDRWRSM 293
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 95/218 (43%), Gaps = 21/218 (9%)
Query: 224 IEEATDKFSEAMKIGEGGYGP--VYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI 281
I +D++ IG G +G + R K + VA+K + + ++E+ S+
Sbjct: 14 IMHDSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIE-RGEKIDENVKREIINHRSL 72
Query: 282 RHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN+V + P + +V EY G L +R+ G R F+ ++ + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGVS 129
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVS--KISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ H + + HRDLK N LLD + KI+D G ++ SV SA GT
Sbjct: 130 YAHAMQ---VAHRDLKLENTLLDGSPAPRLKIADFGYSKA-------SVLHSQPKSAVGT 179
Query: 398 FCYIDPEYQQTGMLTTK-SDIYSFGIMLLQIITARSPM 434
YI PE K +D++S G+ L ++ P
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 91/215 (42%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 87 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 141
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V + GT
Sbjct: 142 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW---------TLCGTPE 189
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 190 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G P RF AA+I
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP----HARF-YAAQIVLTFE 176
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 177 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 224
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 225 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 28/270 (10%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGK-----LDHTPVAIKVLRPDAAQ---GKRQF 271
T+ E D + ++G G + V + + L + IK R +++ +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
++EV +L I+HPN++ L + L+ E + G L D L + + + + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATE 118
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADS 385
+I + +LH + + H DLKP NI LLDRN KI D GLA + D
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DF 170
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP-MGLTHHVSRAI 444
++ + GT ++ PE L ++D++S G++ +++ SP +G T + A
Sbjct: 171 GNEFK--NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 445 EKGTLAEMLDPAVTDWPAEAAESFSKLAIQ 474
E D ++ A A + +L ++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G P RF AA+I
Sbjct: 94 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP----HARF-YAAQIVLTFE 148
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 149 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 196
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 197 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 24/211 (11%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQF---QQEVEVL-SSIRHPNMVLLL 290
IG G Y V +L T A++V++ + Q E V + HP +V L
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 119
Query: 291 GACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
L + EY++ G L + R+ P RF +AEI+ AL +LH+
Sbjct: 120 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP--EEHARF-YSAEISLALNYLHERG--- 173
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLAR--LVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
+++RDLK N+LLD K++D G+ + L P D+ + + GT YI PE
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---GDTTSTF-----CGTPNYIAPEIL 225
Query: 407 QTGMLTTKSDIYSFGIMLLQIITARSPMGLT 437
+ D ++ G+++ +++ RSP +
Sbjct: 226 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 24/211 (11%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQF---QQEVEVL-SSIRHPNMVLLL 290
IG G Y V +L T A+KV++ + Q E V + HP +V L
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 291 GACPDYGCLVY--EYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
L + EY++ G L + R+ P RF +AEI+ AL +LH+
Sbjct: 77 SCFQTESRLFFVIEYVNGGDLMFHMQRQRKLP--EEHARF-YSAEISLALNYLHERG--- 130
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLAR--LVPPSVADSVTQYHMTSAAGTFCYIDPEYQ 406
+++RDLK N+LLD K++D G+ + L P D+ + + GT YI PE
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---GDTTSXF-----CGTPNYIAPEIL 182
Query: 407 QTGMLTTKSDIYSFGIMLLQIITARSPMGLT 437
+ D ++ G+++ +++ RSP +
Sbjct: 183 RGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 213
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 28/270 (10%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGK-----LDHTPVAIKVLRPDAAQ---GKRQF 271
T+ E D + ++G G + V + + L + IK R +++ +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
++EV +L I+HPN++ L + L+ E + G L D L + + + + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATE 118
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADS 385
+I + +LH + + H DLKP NI LLDRN KI D GLA + D
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DF 170
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP-MGLTHHVSRAI 444
++ + GT ++ PE L ++D++S G++ +++ SP +G T + A
Sbjct: 171 GNEFK--NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 445 EKGTLAEMLDPAVTDWPAEAAESFSKLAIQ 474
E D ++ A A + +L ++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+++D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 142
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D +++D G A+ V GT
Sbjct: 143 YLHSLD---LIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTW---------XLCGTPE 190
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 191 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 28/270 (10%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGK-----LDHTPVAIKVLRPDAAQ---GKRQF 271
T+ E D + ++G G + V + + L + IK R +++ +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
++EV +L I+HPN++ L + L+ E + G L D L + + + + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATE 118
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADS 385
+I + +LH + + H DLKP NI LLDRN KI D GLA + D
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DF 170
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP-MGLTHHVSRAI 444
++ + GT ++ PE L ++D++S G++ +++ SP +G T + A
Sbjct: 171 GNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 445 EKGTLAEMLDPAVTDWPAEAAESFSKLAIQ 474
E D ++ A A + +L ++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 44/230 (19%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVL--RPDAAQGKRQ------FQQEVEVL 278
D++ + +G G G V T VAIK++ R A R+ + E+E+L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 279 SSIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA---- 332
+ HP ++ + DY +V E M G L D+++ GN KR K A
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVV--GN-------KRLKEATCKLY 119
Query: 333 --EIATALLFLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVT 387
++ A+ +LH+ ++HRDLKP N+LL + + + KI+D G ++++ +
Sbjct: 120 FYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---- 172
Query: 388 QYHMTSAAGTFCYIDPEY---QQTGMLTTKSDIYSFGIMLLQIITARSPM 434
M + GT Y+ PE T D +S G++L ++ P
Sbjct: 173 ---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 156
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 204
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 28/270 (10%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGK-----LDHTPVAIKVLRPDAAQ---GKRQF 271
T+ E D + ++G G + V + + L + IK R +++ +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
++EV +L I+HPN++ L + L+ E + G L D L + + + + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATE 118
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADS 385
+I + +LH + + H DLKP NI LLDRN KI D GLA + D
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DF 170
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP-MGLTHHVSRAI 444
++ + GT ++ PE L ++D++S G++ +++ SP +G T + A
Sbjct: 171 GNEFK--NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 445 EKGTLAEMLDPAVTDWPAEAAESFSKLAIQ 474
E D ++ A A + +L ++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 21/218 (9%)
Query: 224 IEEATDKFSEAMKIGEGGYGP--VYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI 281
I +D++ IG G +G + R K + VA+K + + ++E+ S+
Sbjct: 13 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSL 71
Query: 282 RHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN+V + P + +V EY G L +R+ G R F+ ++ + +
Sbjct: 72 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGVS 128
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVS--KISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ H + + HRDLK N LLD + KI D G ++ SV S GT
Sbjct: 129 YCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSK-------SSVLHSQPKSTVGT 178
Query: 398 FCYIDPEYQQTGMLTTK-SDIYSFGIMLLQIITARSPM 434
YI PE K +D++S G+ L ++ P
Sbjct: 179 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 216
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 28/270 (10%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGK-----LDHTPVAIKVLRPDAAQ---GKRQF 271
T+ E D + ++G G + V + + L + IK R +++ +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
++EV +L I+HPN++ L + L+ E + G L D L + + + + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATE 118
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADS 385
+I + +LH + + H DLKP NI LLDRN KI D GLA + D
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DF 170
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP-MGLTHHVSRAI 444
++ + GT ++ PE L ++D++S G++ +++ SP +G T + A
Sbjct: 171 GNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 445 EKGTLAEMLDPAVTDWPAEAAESFSKLAIQ 474
E D ++ A A + +L ++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 44/230 (19%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVL--RPDAAQGKRQ------FQQEVEVL 278
D++ + +G G G V T VAIK++ R A R+ + E+E+L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 279 SSIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA---- 332
+ HP ++ + DY +V E M G L D+++ GN KR K A
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVV--GN-------KRLKEATCKLY 119
Query: 333 --EIATALLFLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVT 387
++ A+ +LH+ ++HRDLKP N+LL + + + KI+D G ++++ +
Sbjct: 120 FYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---- 172
Query: 388 QYHMTSAAGTFCYIDPEY---QQTGMLTTKSDIYSFGIMLLQIITARSPM 434
M + GT Y+ PE T D +S G++L ++ P
Sbjct: 173 ---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 233 EAMKIGEGGYGPVYRGKLD----HTPVAIKVLRPDAAQG--KRQFQQEVEVLSSIRHPNM 286
E ++G G +G V +G VA+K+L+ +A K + E V+ + +P +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 287 VLLLGAC-PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
V ++G C + LV E G L L + + + + ++ +++ + +L ++
Sbjct: 433 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESN 489
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
VHRDL N+LL + +KISD GL++ + AD T + PE
Sbjct: 490 ---FVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYKAQTHGKWPVKWYAPEC 543
Query: 406 QQTGMLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ + +
Sbjct: 544 INYYKFSSKSDVWSFGVLMWEAFS 567
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 44/230 (19%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVL--RPDAAQGKRQ------FQQEVEVL 278
D++ + +G G G V T VAIK++ R A R+ + E+E+L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 279 SSIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA---- 332
+ HP ++ + DY +V E M G L D+++ GN KR K A
Sbjct: 69 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVV--GN-------KRLKEATCKLY 118
Query: 333 --EIATALLFLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVT 387
++ A+ +LH+ ++HRDLKP N+LL + + + KI+D G ++++ +
Sbjct: 119 FYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---- 171
Query: 388 QYHMTSAAGTFCYIDPEY---QQTGMLTTKSDIYSFGIMLLQIITARSPM 434
M + GT Y+ PE T D +S G++L ++ P
Sbjct: 172 ---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 93/221 (42%), Gaps = 27/221 (12%)
Query: 224 IEEATDKFSEAMKIGEGGYGP--VYRGKLDHTPVAIKVLRPD---AAQGKRQFQQEVEVL 278
I +D++ IG G +G + R K + VA+K + AA KR+
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINH---- 69
Query: 279 SSIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIAT 336
S+RHPN+V + P + +V EY G L +R+ G R F+ ++ +
Sbjct: 70 RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLIS 126
Query: 337 ALLFLHQAKPEPLVHRDLKPANILLDRNYVS--KISDVGLARLVPPSVADSVTQYHMTSA 394
+ + H + + HRDLK N LLD + KI D G ++ SV S
Sbjct: 127 GVSYCHAMQ---VCHRDLKLENTLLDGSPAPRLKICDFGYSK-------SSVLHSQPKST 176
Query: 395 AGTFCYIDPEYQQTGMLTTK-SDIYSFGIMLLQIITARSPM 434
GT YI PE K +D++S G+ L ++ P
Sbjct: 177 VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 28/270 (10%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGK-----LDHTPVAIKVLRPDAAQ---GKRQF 271
T+ E D + ++G G + V + + L + IK R +++ +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
++EV +L I+HPN++ L + L+ E + G L D L + + + + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATE 118
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADS 385
+I + +LH + + H DLKP NI LLDRN KI D GLA + D
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DF 170
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP-MGLTHHVSRAI 444
++ + GT ++ PE L ++D++S G++ +++ SP +G T + A
Sbjct: 171 GNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 445 EKGTLAEMLDPAVTDWPAEAAESFSKLAIQ 474
E D ++ A A + +L ++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 233 EAMKIGEGGYGPVYRGKLD----HTPVAIKVLRPDAAQG--KRQFQQEVEVLSSIRHPNM 286
E ++G G +G V +G VA+K+L+ +A K + E V+ + +P +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 287 VLLLGAC-PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
V ++G C + LV E G L L + + + ++ +++ + +L ++
Sbjct: 91 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 147
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
VHRDL N+LL + +KISD GL++ + AD T + PE
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALR---ADENYYKAQTHGKWPVKWYAPEC 201
Query: 406 QQTGMLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ + +
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 233 EAMKIGEGGYGPVYRGKLD----HTPVAIKVLRPDAAQG--KRQFQQEVEVLSSIRHPNM 286
E ++G G +G V +G VA+K+L+ +A K + E V+ + +P +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 287 VLLLGAC-PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
V ++G C + LV E G L L + + + ++ +++ + +L ++
Sbjct: 91 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 147
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
VHRDL N+LL + +KISD GL++ + AD T + PE
Sbjct: 148 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALR---ADENYYKAQTHGKWPVKWYAPEC 201
Query: 406 QQTGMLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ + +
Sbjct: 202 INYYKFSSKSDVWSFGVLMWEAFS 225
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 95/204 (46%), Gaps = 16/204 (7%)
Query: 233 EAMKIGEGGYGPVYRGKLD----HTPVAIKVLRPDAAQG--KRQFQQEVEVLSSIRHPNM 286
E ++G G +G V +G VA+K+L+ +A K + E V+ + +P +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 287 VLLLGAC-PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
V ++G C + LV E G L L + + + + ++ +++ + +L ++
Sbjct: 434 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRH---VKDKNIIELVHQVSMGMKYLEESN 490
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
VHRDL N+LL + +KISD GL++ + AD T + PE
Sbjct: 491 ---FVHRDLAARNVLLVTQHYAKISDFGLSKAL---RADENYYKAQTHGKWPVKWYAPEC 544
Query: 406 QQTGMLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ + +
Sbjct: 545 INYYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+++D+ K++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 233 EAMKIGEGGYGPVYRGKLD----HTPVAIKVLRPDAAQG--KRQFQQEVEVLSSIRHPNM 286
E ++G G +G V +G VA+K+L+ +A K + E V+ + +P +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 287 VLLLGAC-PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
V ++G C + LV E G L L + + + ++ +++ + +L ++
Sbjct: 89 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 145
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
VHRDL N+LL + +KISD GL++ + AD T + PE
Sbjct: 146 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALR---ADENYYKAQTHGKWPVKWYAPEC 199
Query: 406 QQTGMLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ + +
Sbjct: 200 INYYKFSSKSDVWSFGVLMWEAFS 223
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 27/229 (11%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGK-----LDHTPVAIKVLRPDAAQ---GKRQF 271
T+ E D + ++G G + V + + L + IK R +++ +
Sbjct: 1 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 60
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
++EV +L I+HPN++ L + L+ E + G L D L + + + + +
Sbjct: 61 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATE 117
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADS 385
+I + +LH + + H DLKP NI LLDRN KI D GLA + D
Sbjct: 118 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DF 169
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
++ + GT ++ PE L ++D++S G++ +++ SP
Sbjct: 170 GNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 233 EAMKIGEGGYGPVYRGKLD----HTPVAIKVLRPDAAQG--KRQFQQEVEVLSSIRHPNM 286
E ++G G +G V +G VA+K+L+ +A K + E V+ + +P +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 287 VLLLGAC-PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
V ++G C + LV E G L L + + + ++ +++ + +L ++
Sbjct: 81 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 137
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
VHRDL N+LL + +KISD GL++ + AD T + PE
Sbjct: 138 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALR---ADENYYKAQTHGKWPVKWYAPEC 191
Query: 406 QQTGMLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ + +
Sbjct: 192 INYYKFSSKSDVWSFGVLMWEAFS 215
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 27/229 (11%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGK-----LDHTPVAIKVLRPDAAQ---GKRQF 271
T+ E D + ++G G + V + + L + IK R +++ +
Sbjct: 1 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 60
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
++EV +L I+HPN++ L + L+ E + G L D L + + + + +
Sbjct: 61 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATE 117
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADS 385
+I + +LH + + H DLKP NI LLDRN KI D GLA + D
Sbjct: 118 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DF 169
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
++ + GT ++ PE L ++D++S G++ +++ SP
Sbjct: 170 GNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 44/230 (19%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVL--RPDAAQGKRQ------FQQEVEVL 278
D++ + +G G G V T VAIK++ R A R+ + E+E+L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 279 SSIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA---- 332
+ HP ++ + DY +V E M G L D+++ GN KR K A
Sbjct: 70 KKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVV--GN-------KRLKEATCKLY 119
Query: 333 --EIATALLFLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVT 387
++ A+ +LH+ ++HRDLKP N+LL + + + KI+D G ++++ +
Sbjct: 120 FYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---- 172
Query: 388 QYHMTSAAGTFCYIDPEY---QQTGMLTTKSDIYSFGIMLLQIITARSPM 434
M + GT Y+ PE T D +S G++L ++ P
Sbjct: 173 ---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLV---PPSVADSVTQY 389
++A + FL K +HRDL NILL N V KI D GLAR + P V T+
Sbjct: 207 QVARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL 263
Query: 390 HMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTL 449
+ ++ PE + +TKSD++S+G++L +I + +G + + +++
Sbjct: 264 PLK-------WMAPESIFDKIYSTKSDVWSYGVLLWEIFS----LGGSPYPGVQMDEDFC 312
Query: 450 AEMLDPAVTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVI 490
+ + + P + ++ + C K+RP ++
Sbjct: 313 SRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELV 353
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDA-AQGKRQ 270
Y + E A ++ +G G +G V + + +P VA+K+L+ A A +
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKA 76
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRL 313
E+++L+ I H N+V LLGAC G ++ EY G+L + L
Sbjct: 77 LMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
++ E M G L R+ RG+ R+ +I +I TA+ FLH + HRD+KP N
Sbjct: 84 IIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLHSHN---IAHRDVKPEN 139
Query: 359 ILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS 415
+L +++ V K++D G A+ TQ + + T Y+ PE
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAK--------ETTQNALQTPCYTPYYVAPEVLGPEKYDKSC 191
Query: 416 DIYSFGIMLLQIITARSPM 434
D++S G+++ ++ P
Sbjct: 192 DMWSLGVIMYILLCGFPPF 210
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 101/215 (46%), Gaps = 26/215 (12%)
Query: 237 IGEGGYGPVYRGKL---DHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIR-HPNMVLLLGA 292
+GEG Y V +G + + A+K++ A + + +EVE L + + N++ L+
Sbjct: 21 LGEGAYAKV-QGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEF 79
Query: 293 CPD----YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
D Y LV+E + GS+ + ++ + R+ ++ ++A AL FLH +
Sbjct: 80 FEDDTRFY--LVFEKLQGGSILAHIQKQKH---FNEREASRVVRDVAAALDFLHT---KG 131
Query: 349 LVHRDLKPANILLDR-NYVS--KISDVGLAR-LVPPSVADSVTQYHMTSAAGTFCYIDPE 404
+ HRDLKP NIL + VS KI D L + + +T +T+ G+ Y+ PE
Sbjct: 132 IAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPE 191
Query: 405 Y-----QQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Q + D++S G++L +++ P
Sbjct: 192 VVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 15/139 (10%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
++ E M G L R+ RG+ R+ +I +I TA+ FLH + HRD+KP N
Sbjct: 103 IIMECMEGGELFSRIQERGDQAFTE-REAAEIMRDIGTAIQFLHSHN---IAHRDVKPEN 158
Query: 359 ILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS 415
+L +++ V K++D G A+ TQ + + T Y+ PE
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAK--------ETTQNALQTPCYTPYYVAPEVLGPEKYDKSC 210
Query: 416 DIYSFGIMLLQIITARSPM 434
D++S G+++ ++ P
Sbjct: 211 DMWSLGVIMYILLCGFPPF 229
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G P RF AA+I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP----HARF-YAAQIVLTFE 156
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 204
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 102/230 (44%), Gaps = 44/230 (19%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVL--RPDAAQGKRQ------FQQEVEVL 278
D++ + +G G G V T VAIK++ R A R+ + E+E+L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 279 SSIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAA---- 332
+ HP ++ + DY +V E M G L D+++ GN KR K A
Sbjct: 76 KKLNHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVV--GN-------KRLKEATCKLY 125
Query: 333 --EIATALLFLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVT 387
++ A+ +LH+ ++HRDLKP N+LL + + + KI+D G ++++ +
Sbjct: 126 FYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL---- 178
Query: 388 QYHMTSAAGTFCYIDPEY---QQTGMLTTKSDIYSFGIMLLQIITARSPM 434
M + GT Y+ PE T D +S G++L ++ P
Sbjct: 179 ---MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 28/270 (10%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGK-----LDHTPVAIKVLRPDAAQ---GKRQF 271
T+ E D + ++G G + V + + L + IK R +++ +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
++EV +L I+HPN++ L + L+ E + G L D L + + + + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATE 118
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADS 385
+I + +LH + + H DLKP NI LLDRN KI D GLA + D
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DF 170
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP-MGLTHHVSRAI 444
++ + GT ++ PE L ++D++S G++ +++ SP +G T + A
Sbjct: 171 GNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 445 EKGTLAEMLDPAVTDWPAEAAESFSKLAIQ 474
E D ++ A A + +L ++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 28/270 (10%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGK-----LDHTPVAIKVLRPDAAQ---GKRQF 271
T+ E D + ++G G + V + + L + IK R +++ +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
++EV +L I+HPN++ L + L+ E + G L D L + + + + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATE 118
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADS 385
+I + +LH + + H DLKP NI LLDRN KI D GLA + D
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DF 170
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP-MGLTHHVSRAI 444
++ + GT ++ PE L ++D++S G++ +++ SP +G T + A
Sbjct: 171 GNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 445 EKGTLAEMLDPAVTDWPAEAAESFSKLAIQ 474
E D ++ A A + +L ++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L ++ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+++D+ K++D GLA+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 28/270 (10%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGK-----LDHTPVAIKVLRPDAAQ---GKRQF 271
T+ E D + ++G G + V + + L + IK R +++ +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
++EV +L I+HPN++ L + L+ E + G L D L + + + + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATE 118
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADS 385
+I + +LH + + H DLKP NI LLDRN KI D GLA + D
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DF 170
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP-MGLTHHVSRAI 444
++ + GT ++ PE L ++D++S G++ +++ SP +G T + A
Sbjct: 171 GNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 445 EKGTLAEMLDPAVTDWPAEAAESFSKLAIQ 474
E D ++ A A + +L ++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 102/229 (44%), Gaps = 27/229 (11%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGK-----LDHTPVAIKVLRPDAAQ---GKRQF 271
T+ E D + ++G G + V + + L + IK R +++ +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
++EV +L I+HPN++ L + L+ E + G L D L + + + + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES---LTEEEATE 118
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADS 385
+I + +LH + + H DLKP NI LLDRN KI D GLA + D
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DF 170
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
++ + GT ++ PE L ++D++S G++ +++ SP
Sbjct: 171 GNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 233 EAMKIGEGGYGPVYRGKLD----HTPVAIKVLRPDAAQG--KRQFQQEVEVLSSIRHPNM 286
E ++G G +G V +G VA+K+L+ +A K + E V+ + +P +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 287 VLLLGAC-PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
V ++G C + LV E G L L + + + ++ +++ + +L ++
Sbjct: 75 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 131
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
VHRDL N+LL + +KISD GL++ + AD T + PE
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALR---ADENXYKAQTHGKWPVKWYAPEC 185
Query: 406 QQTGMLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ + +
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 233 EAMKIGEGGYGPVYRGKLD----HTPVAIKVLRPDAAQG--KRQFQQEVEVLSSIRHPNM 286
E ++G G +G V +G VA+K+L+ +A K + E V+ + +P +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 287 VLLLGAC-PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
V ++G C + LV E G L L + + + ++ +++ + +L ++
Sbjct: 69 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 125
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
VHRDL N+LL + +KISD GL++ + AD T + PE
Sbjct: 126 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALR---ADENYYKAQTHGKWPVKWYAPEC 179
Query: 406 QQTGMLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ + +
Sbjct: 180 INYYKFSSKSDVWSFGVLMWEAFS 203
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY G + L R G P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+++D+ K++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 22/240 (9%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHT-PVAIKVLRPDAAQGK--RQFQQEVEVLSSIRHPN 285
+K+ KIGEG YG VY+ + ++ A+K +R + +E+ +L ++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 286 MVLLLGACPDYGCLVYEYMHNGSLEDRLLR--RGNTPVIPWRKRFKIAAEIATALLFLHQ 343
+V L LV + H +LL G + K F + ++ + + H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT-AKSFLL--QLLNGIAYCHD 118
Query: 344 AKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDP 403
+ ++HRDLKP N+L++R KI+D GLAR + V +Y T T Y P
Sbjct: 119 RR---VLHRDLKPQNLLINREGELKIADFGLAR----AFGIPVRKY--THEVVTLWYRAP 169
Query: 404 E-YQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLD-PAVTDWP 461
+ + +T DI+S G + +++ +P L VS A + + +L P +WP
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG-TP--LFPGVSEADQLMRIFRILGTPNSKNWP 226
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 233 EAMKIGEGGYGPVYRGKLD----HTPVAIKVLRPDAAQG--KRQFQQEVEVLSSIRHPNM 286
E ++G G +G V +G VA+K+L+ +A K + E V+ + +P +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 287 VLLLGAC-PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
V ++G C + LV E G L L + + + ++ +++ + +L ++
Sbjct: 75 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 131
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
VHRDL N+LL + +KISD GL++ + AD T + PE
Sbjct: 132 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALR---ADENYYKAQTHGKWPVKWYAPEC 185
Query: 406 QQTGMLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ + +
Sbjct: 186 INYYKFSSKSDVWSFGVLMWEAFS 209
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 118/270 (43%), Gaps = 28/270 (10%)
Query: 220 TIEEIEEATDKFSEAMKIGEGGYGPVYRGK-----LDHTPVAIKVLRPDAAQ---GKRQF 271
T+ E D + ++G G + V + + L + IK R +++ +
Sbjct: 2 TVFRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDI 61
Query: 272 QQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
++EV +L I+HPN++ L + L+ E + G L D L + + + + +
Sbjct: 62 EREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES---LTEEEATE 118
Query: 330 IAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADS 385
+I + +LH + + H DLKP NI LLDRN KI D GLA + D
Sbjct: 119 FLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI-----DF 170
Query: 386 VTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP-MGLTHHVSRAI 444
++ + GT ++ PE L ++D++S G++ +++ SP +G T + A
Sbjct: 171 GNEF--KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN 228
Query: 445 EKGTLAEMLDPAVTDWPAEAAESFSKLAIQ 474
E D ++ A A + +L ++
Sbjct: 229 VSAVNYEFEDEYFSNTSALAKDFIRRLLVK 258
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 233 EAMKIGEGGYGPVYRGKLD----HTPVAIKVLRPDAAQG--KRQFQQEVEVLSSIRHPNM 286
E ++G G +G V +G VA+K+L+ +A K + E V+ + +P +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 287 VLLLGAC-PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
V ++G C + LV E G L L + + + ++ +++ + +L ++
Sbjct: 71 VRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKD---KNIIELVHQVSMGMKYLEESN 127
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
VHRDL N+LL + +KISD GL++ + AD T + PE
Sbjct: 128 ---FVHRDLAARNVLLVTQHYAKISDFGLSKALR---ADENYYKAQTHGKWPVKWYAPEC 181
Query: 406 QQTGMLTTKSDIYSFGIMLLQIIT 429
++KSD++SFG+++ + +
Sbjct: 182 INYYKFSSKSDVWSFGVLMWEAFS 205
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 36/220 (16%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---------WXLCGT-- 201
Query: 400 YIDPEYQQTGMLTTKS-----DIYSFGIMLLQIITARSPM 434
PEY ++ +K D ++ G+++ ++ P
Sbjct: 202 ---PEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 22/240 (9%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHT-PVAIKVLRPDAAQGK--RQFQQEVEVLSSIRHPN 285
+K+ KIGEG YG VY+ + ++ A+K +R + +E+ +L ++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 286 MVLLLGACPDYGCLVYEYMHNGSLEDRLLR--RGNTPVIPWRKRFKIAAEIATALLFLHQ 343
+V L LV + H +LL G + K F + ++ + + H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT-AKSFLL--QLLNGIAYCHD 118
Query: 344 AKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDP 403
+ ++HRDLKP N+L++R KI+D GLAR + V +Y T T Y P
Sbjct: 119 RR---VLHRDLKPQNLLINREGELKIADFGLAR----AFGIPVRKY--THEVVTLWYRAP 169
Query: 404 E-YQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLD-PAVTDWP 461
+ + +T DI+S G + +++ +P L VS A + + +L P +WP
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG-AP--LFPGVSEADQLMRIFRILGTPNSKNWP 226
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 109/240 (45%), Gaps = 22/240 (9%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHT-PVAIKVLRPDAAQGK--RQFQQEVEVLSSIRHPN 285
+K+ KIGEG YG VY+ + ++ A+K +R + +E+ +L ++H N
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 286 MVLLLGACPDYGCLVYEYMHNGSLEDRLLR--RGNTPVIPWRKRFKIAAEIATALLFLHQ 343
+V L LV + H +LL G + K F + ++ + + H
Sbjct: 62 IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT-AKSFLL--QLLNGIAYCHD 118
Query: 344 AKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDP 403
+ ++HRDLKP N+L++R KI+D GLAR + V +Y T T Y P
Sbjct: 119 RR---VLHRDLKPQNLLINREGELKIADFGLAR----AFGIPVRKY--THEIVTLWYRAP 169
Query: 404 E-YQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLD-PAVTDWP 461
+ + +T DI+S G + +++ +P L VS A + + +L P +WP
Sbjct: 170 DVLMGSKKYSTTIDIWSVGCIFAEMVNG-TP--LFPGVSEADQLMRIFRILGTPNSKNWP 226
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 34/177 (19%)
Query: 272 QQEVEVLSSIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
+ E+E+L + HP ++ + DY +V E M G L D+++ GN KR K
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVV--GN-------KRLK 237
Query: 330 IAA------EIATALLFLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPP 380
A ++ A+ +LH+ ++HRDLKP N+LL + + + KI+D G ++++
Sbjct: 238 EATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 294
Query: 381 SVADSVTQYHMTSAAGTFCYIDPEY---QQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ M + GT Y+ PE T D +S G++L ++ P
Sbjct: 295 TSL-------MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E + ++
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY G + L R G + P RF AA+I
Sbjct: 102 PFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 156
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+L+D+ K++D G A+ V GT
Sbjct: 157 YLHSLD---LIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT---------WXLCGTPE 204
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+++D+ +++D G A+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 34/177 (19%)
Query: 272 QQEVEVLSSIRHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK 329
+ E+E+L + HP ++ + DY +V E M G L D+++ GN KR K
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVV--GN-------KRLK 251
Query: 330 IAA------EIATALLFLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPP 380
A ++ A+ +LH+ ++HRDLKP N+LL + + + KI+D G ++++
Sbjct: 252 EATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGE 308
Query: 381 SVADSVTQYHMTSAAGTFCYIDPEY---QQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ M + GT Y+ PE T D +S G++L ++ P
Sbjct: 309 TSL-------MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 28/219 (12%)
Query: 225 EEATDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQ---GKRQFQQEVEVLSSI 281
E + +F+ K + G G Y K IK R +++ + + ++EV +L I
Sbjct: 19 ELGSGQFAIVRKCRQKGTGKEYAAKF------IKKRRLSSSRRGVSREEIEREVNILREI 72
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L + L+ E + G L D L + + + + + +I +
Sbjct: 73 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVH 129
Query: 340 FLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADSVTQYHMTSAA 395
+LH + + H DLKP NI LLD+N + K+ D G+A + +
Sbjct: 130 YLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG-------NEFKNIF 179
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
GT ++ PE L ++D++S G++ +++ SP
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 28/219 (12%)
Query: 225 EEATDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQ---GKRQFQQEVEVLSSI 281
E + +F+ K + G G Y K IK R +++ + + ++EV +L I
Sbjct: 12 ELGSGQFAIVRKCRQKGTGKEYAAKF------IKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L + L+ E + G L D L + + + + + +I +
Sbjct: 66 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVH 122
Query: 340 FLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADSVTQYHMTSAA 395
+LH + + H DLKP NI LLD+N + K+ D G+A + +
Sbjct: 123 YLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG-------NEFKNIF 172
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
GT ++ PE L ++D++S G++ +++ SP
Sbjct: 173 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L ++ + E +L ++
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+++D+ +++D GLA+ V GT
Sbjct: 156 YLHSLD---LIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT---------WXLCGTPE 203
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 204 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 115/268 (42%), Gaps = 44/268 (16%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVL-RP--DAAQGKRQFQQEVEVLSSIRH 283
++ IG G G V Y L+ VAIK L RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNH 82
Query: 284 PNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF--- 340
N++ LL L E + + L+ + VI + ++ E + LL+
Sbjct: 83 KNIIGLLNVFTPQKSL--EEFQDVYIVMELMDANLSQVI----QMELDHERMSYLLYQML 136
Query: 341 -----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 137 VGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTSFMMTPYV 186
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT--- 448
T Y PE DI+S G+++ ++I T H+ ++ IE+ GT
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 449 -LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V + P A SF KL
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKL 274
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P + L + D L V EY G + L R G + P RF AA+I
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 156
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+++D+ K++D G A+ V GT
Sbjct: 157 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---------WXLCGTPE 204
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 88/215 (40%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P + L + D L V EY G + L R G + P RF AA+I
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 156
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+++D+ K++D G A+ V GT
Sbjct: 157 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---------WXLCGTPE 204
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 115/268 (42%), Gaps = 44/268 (16%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVL-RP--DAAQGKRQFQQEVEVLSSIRH 283
++ IG G G V Y L+ VAIK L RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVVAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNH 82
Query: 284 PNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF--- 340
N++ LL L E + + L+ + VI + ++ E + LL+
Sbjct: 83 KNIIGLLNVFTPQKSL--EEFQDVYIVMELMDANLSQVI----QMELDHERMSYLLYQML 136
Query: 341 -----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 137 VGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTSFMMTPYV 186
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT--- 448
T Y PE DI+S G+++ ++I T H+ ++ IE+ GT
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 449 -LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V + P A SF KL
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKL 274
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 17/159 (10%)
Query: 229 DKFSEAMKIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V + K A+K+L +Q + E +L ++
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRG--NTPVIPWRKRFKIAAEIATALL 339
P +V L + D L V EY+ G + L R G + P RF AA+I
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP----HARF-YAAQIVLTFE 155
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLV 378
+LH L++RDLKP N+L+D+ +++D G A+ V
Sbjct: 156 YLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 28/227 (12%)
Query: 222 EEIEEATDKFSEAMKI----GEGGYGPVYRG--KLDHTPVAIKVLRPD--AAQGKRQFQQ 273
E + A+ KFS+ + G+G + V R K A K++ +A+ ++ ++
Sbjct: 18 EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER 77
Query: 274 EVEVLSSIRHPNMVLLLGACPD--YGCLVYEYMHNGSL-EDRLLRRGNTPVIPWRKRFKI 330
E + ++HPN+V L + + + LV++ + G L ED + R +
Sbjct: 78 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA----DASHC 133
Query: 331 AAEIATALLFLHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVT 387
+I ++ + H +VHR+LKP N+LL + K++D GLA V S A
Sbjct: 134 IQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA---- 186
Query: 388 QYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+H AGT Y+ PE + + DI++ G++L ++ P
Sbjct: 187 -WH--GFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 30/234 (12%)
Query: 216 YRKYTIEEIE----EATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKR 269
++KY + +E D + ++G G +G V+R K K + K
Sbjct: 34 WKKYVPQPVEVKQGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY 93
Query: 270 QFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRL----LRRGNTPVIP 323
+ E+ +++ + HP ++ L A D L+ E++ G L DR+ + VI
Sbjct: 94 TVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVIN 153
Query: 324 WRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS--KISDVGLARLVPPS 381
+ + + L +H+ +VH D+KP NI+ + S KI D GLA + P
Sbjct: 154 YMR------QACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNP- 203
Query: 382 VADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMG 435
D + + +T+A F PE + +D+++ G++ +++ SP
Sbjct: 204 --DEIVK--VTTATAEFA--APEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFA 251
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 28/219 (12%)
Query: 225 EEATDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQ---GKRQFQQEVEVLSSI 281
E + +F+ K + G G Y K IK R +++ + + ++EV +L I
Sbjct: 33 ELGSGQFAIVRKCRQKGTGKEYAAKF------IKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 282 RHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN++ L + L+ E + G L D L + + + + + +I +
Sbjct: 87 RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES---LTEDEATQFLKQILDGVH 143
Query: 340 FLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPSVADSVTQYHMTSAA 395
+LH + + H DLKP NI LLD+N + K+ D G+A + +
Sbjct: 144 YLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG-------NEFKNIF 193
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
GT ++ PE L ++D++S G++ +++ SP
Sbjct: 194 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 87/215 (40%), Gaps = 26/215 (12%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQ---EVEVLSSIRH 283
D+F +G G +G V K T A+K+L +Q + E +L ++
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 284 PNMVLLLGACPDYGCL--VYEYMHNGSLEDRLLRRGNT--PVIPWRKRFKIAAEIATALL 339
P + L + D L V EY G + L R G P RF AA+I
Sbjct: 102 PFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP----HARF-YAAQIVLTFE 156
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFC 399
+LH L++RDLKP N+++D+ K++D G A+ V GT
Sbjct: 157 YLHSLD---LIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT---------WXLCGTPE 204
Query: 400 YIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D ++ G+++ ++ P
Sbjct: 205 YLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 228 TDKFSEAMKIGEGGYGPVYRGKLDHTPV---AIKVLRPD--AAQGKRQFQQEVEVLSSIR 282
TD + ++G+G + V R + TP A K++ +A+ ++ ++E + ++
Sbjct: 30 TDDYQLFEELGKGAFSVVRRC-VKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLK 88
Query: 283 HPNMVLLLGACPDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF 340
HPN+V L + + G LV++ + G L + ++ R + + I L
Sbjct: 89 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR------EYYSEADASHCIHQILES 142
Query: 341 LHQAKPEPLVHRDLKPANILLD---RNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
++ +VHRDLKP N+LL + K++D GLA + Q AGT
Sbjct: 143 VNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA------IEVQGEQQAWFGFAGT 196
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + DI++ G++L ++ P
Sbjct: 197 PGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 37/218 (16%)
Query: 237 IGEGGYGPVY---------RGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRH-PNM 286
+G G YG V+ GKL V K A+ + E +VL IR P +
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 287 VLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFK------IAAEIATAL 338
V L A L+ +Y++ G L L +R +RF EI AL
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLSQR---------ERFTEHEVQIYVGEIVLAL 172
Query: 339 LFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTF 398
LH+ +++RD+K NILLD N ++D GL++ VAD + + GT
Sbjct: 173 EHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK---EFVADETERAY--DFCGTI 224
Query: 399 CYIDPEYQQTG--MLTTKSDIYSFGIMLLQIITARSPM 434
Y+ P+ + G D +S G+++ +++T SP
Sbjct: 225 EYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 228 TDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD--AAQGKRQFQQEVEVLSSIRH 283
+D + ++G+G + V R K A K++ +A+ ++ ++E + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 284 PNMVLLLGACPD--YGCLVYEYMHNGSL-EDRLLRRGNTPVIPWRKRFKIAAEIATALLF 340
PN+V L + + + LV++ + G L ED + R + +I ++ +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA----DASHCIQQILESIAY 120
Query: 341 LHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
H +VHR+LKP N+LL + K++D GLA V S A +H AGT
Sbjct: 121 CHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-----WH--GFAGT 170
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + + DI++ G++L ++ P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 228 TDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD--AAQGKRQFQQEVEVLSSIRH 283
+D + ++G+G + V R K A K++ +A+ ++ ++E + ++H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 284 PNMVLLLGACPD--YGCLVYEYMHNGSL-EDRLLRRGNTPVIPWRKRFKIAAEIATALLF 340
PN+V L + + + LV++ + G L ED + R + +I ++ +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA----DASHCIQQILESIAY 119
Query: 341 LHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
H +VHR+LKP N+LL + K++D GLA V S A +H AGT
Sbjct: 120 CHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-----WH--GFAGT 169
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + + DI++ G++L ++ P
Sbjct: 170 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 99/224 (44%), Gaps = 27/224 (12%)
Query: 225 EEATDKFSEAMKIGEGGYGPVYRGKLDHTPV--AIKVLRPDAAQGKR------QFQQEVE 276
++ D + ++G G + V + + T + A K ++ ++ R + ++EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67
Query: 277 VLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEI 334
+L + HPN++ L + L+ E + G L D L ++ + + + +I
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQI 124
Query: 335 ATALLFLHQAKPEPLVHRDLKPANI-LLDRNY---VSKISDVGLARLVPPSVADSVTQYH 390
+ +LH K + H DLKP NI LLD+N K+ D GLA + V
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-------E 174
Query: 391 MTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ GT ++ PE L ++D++S G++ +++ SP
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 111/267 (41%), Gaps = 42/267 (15%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y L+ K+ RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + + L+ + VI + ++ E + LL+
Sbjct: 84 NIIGLLNVFTPQKSL--EEFQDVYIVMELMDANLSQVI----QMELDHERMSYLLYQMLC 137
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 187
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT---- 448
T Y PE DI+S G ++ ++I T H+ ++ IE+ GT
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 449 LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V + P A SF KL
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKL 274
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 73/145 (50%), Gaps = 15/145 (10%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
LV+E M GS+ + +R + + + + ++A+AL FLH + + HRDLKP N
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNEL---EASVVVQDVASALDFLHN---KGIAHRDLKPEN 141
Query: 359 ILLDR-NYVS--KISDVGLARLVPPSVADS-VTQYHMTSAAGTFCYIDPEY-----QQTG 409
IL + N VS KI D GL + + S ++ + + G+ Y+ PE ++
Sbjct: 142 ILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEAS 201
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
+ + D++S G++L +++ P
Sbjct: 202 IYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 21/218 (9%)
Query: 224 IEEATDKFSEAMKIGEGGYGP--VYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI 281
I +D++ IG G +G + R K + VA+K + + ++E+ S+
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSL 72
Query: 282 RHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN+V + P + +V EY G L +R+ G R F+ ++ + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGVS 129
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVS--KISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ H + + HRDLK N LLD + KI G ++ SV S GT
Sbjct: 130 YCHAMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSK-------SSVLHSQPKSTVGT 179
Query: 398 FCYIDPEYQQTGMLTTK-SDIYSFGIMLLQIITARSPM 434
YI PE K +D++S G+ L ++ P
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 111/267 (41%), Gaps = 42/267 (15%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y L+ K+ RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + + L+ + VI + ++ E + LL+
Sbjct: 84 NIIGLLNVFTPQKSL--EEFQDVYIVMELMDANLSQVI----QMELDHERMSYLLYQMLC 137
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTSFMMTPYVV 187
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT---- 448
T Y PE DI+S G ++ ++I T H+ ++ IE+ GT
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 449 LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V + P A SF KL
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKL 274
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 99/217 (45%), Gaps = 24/217 (11%)
Query: 228 TDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD--AAQGKRQFQQEVEVLSSIRH 283
+D + ++G+G + V R K A K++ +A+ ++ ++E + ++H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 284 PNMVLLLGACPD--YGCLVYEYMHNGSL-EDRLLRRGNTPVIPWRKRFKIAAEIATALLF 340
PN+V L + + + LV++ + G L ED + R + +I ++ +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEA----DASHCIQQILESIAY 120
Query: 341 LHQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
H +VHR+LKP N+LL + K++D GLA V S A +H AGT
Sbjct: 121 CHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-----WH--GFAGT 170
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + + DI++ G++L ++ P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 235 MKIGEGGYGPV------YRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
+KIGEG G V GKL VA+K + Q + EV ++ +H N+V
Sbjct: 157 IKIGEGSTGIVCIATVRSSGKL----VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 212
Query: 289 LLGA--CPDYGCLVYEYMHNGSLEDRLLR-RGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
+ + D +V E++ G+L D + R N I + + AL LH
Sbjct: 213 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHA-- 265
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ ++HRD+K +ILL + K+SD G V V GT ++ PE
Sbjct: 266 -QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYWMAPEL 318
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
+ DI+S GIM+++++ P
Sbjct: 319 ISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 111/267 (41%), Gaps = 42/267 (15%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y L+ K+ RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNHK 83
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + + L+ + VI + ++ E + LL+
Sbjct: 84 NIIGLLNVFTPQKSL--EEFQDVYIVMELMDANLSQVI----QMELDHERMSYLLYQMLC 137
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTSFMMTPYVV 187
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT---- 448
T Y PE DI+S G ++ ++I T H+ ++ IE+ GT
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 449 LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V + P A SF KL
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKL 274
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 114/268 (42%), Gaps = 44/268 (16%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVL-RP--DAAQGKRQFQQEVEVLSSIRH 283
++ IG G G V Y L+ VAIK L RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKVVNH 82
Query: 284 PNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF--- 340
N++ LL L E + + L+ + VI + ++ E + LL+
Sbjct: 83 KNIIGLLNVFTPQKSL--EEFQDVYIVMELMDANLSQVI----QMELDHERMSYLLYQML 136
Query: 341 -----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 137 VGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR-------TAGTSFMMTPYV 186
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT--- 448
T Y PE DI+S G ++ ++I T H+ ++ IE+ GT
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSP 246
Query: 449 -LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V + P A SF KL
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKL 274
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 110/267 (41%), Gaps = 42/267 (15%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y L+ K+ RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + + L+ VI + ++ E + LL+
Sbjct: 84 NIIGLLNVFTPQKSL--EEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLC 137
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 187
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT---- 448
T Y PE DI+S G ++ ++I T H+ ++ IE+ GT
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 449 LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V + P A SF KL
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKL 274
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 110/267 (41%), Gaps = 42/267 (15%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y L+ K+ RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + + L+ VI + ++ E + LL+
Sbjct: 84 NIIGLLNVFTPQKSL--EEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLC 137
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPEVV 187
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT---- 448
T Y PE DI+S G ++ ++I T H+ ++ IE+ GT
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE 247
Query: 449 LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V + P A SF KL
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKL 274
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 110/267 (41%), Gaps = 42/267 (15%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y L+ K+ RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + + L+ VI + ++ E + LL+
Sbjct: 84 NIIGLLNVFTPQKSL--EEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLC 137
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 187
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT---- 448
T Y PE DI+S G ++ ++I T H+ ++ IE+ GT
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE 247
Query: 449 LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V + P A SF KL
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKL 274
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 110/267 (41%), Gaps = 42/267 (15%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y L+ K+ RP + KR ++ E+ ++ + H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 84
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + + L+ VI + ++ E + LL+
Sbjct: 85 NIIGLLNVFTPQKSL--EEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLC 138
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 188
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT---- 448
T Y PE DI+S G ++ ++I T H+ ++ IE+ GT
Sbjct: 189 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE 248
Query: 449 LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V + P A SF KL
Sbjct: 249 FMKKLQPTVRTYVENRPKYAGYSFEKL 275
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 235 MKIGEGGYGPVY------RGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
+KIGEG G V GKL VA+K + Q + EV ++ +H N+V
Sbjct: 35 IKIGEGSTGIVCIATVRSSGKL----VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 90
Query: 289 LLGA--CPDYGCLVYEYMHNGSLEDRLLR-RGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
+ + D +V E++ G+L D + R N +IAA L L
Sbjct: 91 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE--------QIAAVCLAVLQALSVLH 142
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ ++HRD+K +ILL + K+SD G V V GT ++ PE
Sbjct: 143 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYWMAPEL 196
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
+ DI+S GIM+++++ P
Sbjct: 197 ISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 235 MKIGEGGYGPVY------RGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
+KIGEG G V GKL VA+K + Q + EV ++ +H N+V
Sbjct: 37 IKIGEGSTGIVCIATVRSSGKL----VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 92
Query: 289 LLGA--CPDYGCLVYEYMHNGSLEDRLLR-RGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
+ + D +V E++ G+L D + R N +IAA L L
Sbjct: 93 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE--------QIAAVCLAVLQALSVLH 144
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ ++HRD+K +ILL + K+SD G V V GT ++ PE
Sbjct: 145 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYWMAPEL 198
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
+ DI+S GIM+++++ P
Sbjct: 199 ISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 235 MKIGEGGYGPVY------RGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
+KIGEG G V GKL VA+K + Q + EV ++ +H N+V
Sbjct: 26 IKIGEGSTGIVCIATVRSSGKL----VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 81
Query: 289 LLGA--CPDYGCLVYEYMHNGSLEDRLLR-RGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
+ + D +V E++ G+L D + R N +IAA L L
Sbjct: 82 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE--------QIAAVCLAVLQALSVLH 133
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ ++HRD+K +ILL + K+SD G V V GT ++ PE
Sbjct: 134 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYWMAPEL 187
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
+ DI+S GIM+++++ P
Sbjct: 188 ISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 235 MKIGEGGYGPVY------RGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
+KIGEG G V GKL VA+K + Q + EV ++ +H N+V
Sbjct: 30 IKIGEGSTGIVCIATVRSSGKL----VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 85
Query: 289 LLGA--CPDYGCLVYEYMHNGSLEDRLLR-RGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
+ + D +V E++ G+L D + R N +IAA L L
Sbjct: 86 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE--------QIAAVCLAVLQALSVLH 137
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ ++HRD+K +ILL + K+SD G V V GT ++ PE
Sbjct: 138 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR------KXLVGTPYWMAPEL 191
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
+ DI+S GIM+++++ P
Sbjct: 192 ISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 228 TDKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVLRPD--AAQGKRQFQQEVEVLSSIRH 283
TD++ ++G+G + V R T A K++ +A+ ++ ++E + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 284 PNMVLLLGACPDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
PN+V L + + G LV++ + G L + ++ R + + I L +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR------EYYSEADASHCIQQILESV 116
Query: 342 HQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTF 398
+ +VHRDLKP N+LL + K++D GLA + Q AGT
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA------IEVQGDQQAWFGFAGTP 170
Query: 399 CYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D+++ G++L ++ P
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 106/273 (38%), Gaps = 30/273 (10%)
Query: 229 DKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQEV-EVLSSIRHPN 285
+KF KIG G +G +Y G T VAIK+ + ++ ++ +L
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIP 66
Query: 286 MVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
V G DY LV + + SLED L + + + +A ++ + F+H
Sbjct: 67 NVRWFGVEGDYNVLVMDLL-GPSLED--LFNFCSRKLSLKTVLMLADQMINRVEFVHS-- 121
Query: 346 PEPLVHRDLKPANILLD---RNYVSKISDVGLARLVPPSVADSVTQYHM-----TSAAGT 397
+ +HRD+KP N L+ R I D GLA+ D+ T H+ + GT
Sbjct: 122 -KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAK----KYRDTSTHQHIPYRENKNLTGT 176
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM-----GLTHHVSRAIEKGTLAEM 452
Y + + D+ S G +L+ + P G I + +A
Sbjct: 177 ARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATS 236
Query: 453 LDPAVTDWPAEAAESFSKLAIQCAELRKKDRPD 485
++ +P E A F C LR D+PD
Sbjct: 237 IEALCRGYPTEFASYFH----YCRSLRFDDKPD 265
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 85/172 (49%), Gaps = 20/172 (11%)
Query: 270 QFQQEVEVLSSIRHPNMVLLLGACPD----YGCLVYEYMHNGSLEDRLLRRGNTPVIPWR 325
Q QE+ +L + HPN+V L+ D + +V+E ++ G + + + P+ +
Sbjct: 82 QVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK---PLSEDQ 138
Query: 326 KRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADS 385
RF ++ + +LH K ++HRD+KP+N+L+ + KI+D G++ S A
Sbjct: 139 ARFYFQ-DLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA-- 192
Query: 386 VTQYHMTSAAGTFCYIDPE--YQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
+++ GT ++ PE + + + K+ D+++ G+ L + + P
Sbjct: 193 ----LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF 240
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 228 TDKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVLRPD--AAQGKRQFQQEVEVLSSIRH 283
TD++ IG+G + V R T A K++ +A+ ++ ++E + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 284 PNMVLLLGACPDYGC--LVYEYMHNGSL-EDRLLRRGNTPVIPWRKRFKIAAEIATALLF 340
N+V L + + G LV++ + G L ED + R + +I A+L
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEA----DASHCIQQILEAVLH 118
Query: 341 LHQAKPEPLVHRDLKPANILLD---RNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGT 397
HQ +VHRDLKP N+LL + K++D GLA V Q AGT
Sbjct: 119 CHQMG---VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD------QQAWFGFAGT 169
Query: 398 FCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + DI++ G++L ++ P
Sbjct: 170 PGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 27/208 (12%)
Query: 235 MKIGEGGYGPVY------RGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
+KIGEG G V GKL VA+K + Q + EV ++ +H N+V
Sbjct: 80 IKIGEGSTGIVCIATVRSSGKL----VAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVE 135
Query: 289 LLGA--CPDYGCLVYEYMHNGSLEDRLLR-RGNTPVIPWRKRFKIAAEIATALLFLHQAK 345
+ + D +V E++ G+L D + R N +IAA L L
Sbjct: 136 MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE--------QIAAVCLAVLQALSVLH 187
Query: 346 PEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEY 405
+ ++HRD+K +ILL + K+SD G V V GT ++ PE
Sbjct: 188 AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------RRKXLVGTPYWMAPEL 241
Query: 406 QQTGMLTTKSDIYSFGIMLLQIITARSP 433
+ DI+S GIM+++++ P
Sbjct: 242 ISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 328 FKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYV---SKISDVGLARLVPPSVAD 384
++ +I + +LHQ +VH DLKP NILL Y KI D G++R + +
Sbjct: 134 IRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC-- 188
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ GT Y+ PE +TT +D+++ GI+ ++T SP
Sbjct: 189 -----ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 88/222 (39%), Gaps = 39/222 (17%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKV------LRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
+G+G V+RG+ T AIKV LRP Q +E EVL + H N+V
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ-----MREFEVLKKLNHKNIVK 71
Query: 289 LLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQA 344
L + L+ E+ GSL L N +P + + ++ + +
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM---NHL 128
Query: 345 KPEPLVHRDLKPANILL----DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCY 400
+ +VHR++KP NI+ D V K++D G AR + D S GT Y
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR----ELEDD---EQFVSLYGTEEY 181
Query: 401 IDPEYQQTGML--------TTKSDIYSFGIMLLQIITARSPM 434
+ P+ + +L D++S G+ T P
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 228 TDKFSEAMKIGEGGYGPVYRGKLDHT--PVAIKVLRPD--AAQGKRQFQQEVEVLSSIRH 283
TD++ ++G+G + V R T A K++ +A+ ++ ++E + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 284 PNMVLLLGACPDYGC--LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFL 341
PN+V L + + G LV++ + G L + ++ R + + I L +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAR------EYYSEADASHCIQQILESV 116
Query: 342 HQAKPEPLVHRDLKPANILL---DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTF 398
+ +VHRDLKP N+LL + K++D GLA + Q AGT
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA------IEVQGDQQAWFGFAGTP 170
Query: 399 CYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
Y+ PE + D+++ G++L ++ P
Sbjct: 171 GYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 91/218 (41%), Gaps = 21/218 (9%)
Query: 224 IEEATDKFSEAMKIGEGGYGP--VYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSI 281
I +D++ IG G +G + R K + VA+K + + ++E+ S+
Sbjct: 14 IMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE-RGEKIDENVKREIINHRSL 72
Query: 282 RHPNMVLL--LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALL 339
RHPN+V + P + +V EY G L +R+ G R F+ ++ + +
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGVS 129
Query: 340 FLHQAKPEPLVHRDLKPANILLDRNYVS--KISDVGLARLVPPSVADSVTQYHMTSAAGT 397
+ H + + HRDLK N LLD + KI G ++ SV GT
Sbjct: 130 YCHAMQ---VCHRDLKLENTLLDGSPAPRLKICAFGYSK-------SSVLHSQPKDTVGT 179
Query: 398 FCYIDPEYQQTGMLTTK-SDIYSFGIMLLQIITARSPM 434
YI PE K +D++S G+ L ++ P
Sbjct: 180 PAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPF 217
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
+V E + G L R+ RG+ R+ +I I A+ +LH + HRD+KP N
Sbjct: 106 IVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 161
Query: 359 ILLDR---NYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS 415
+L N + K++D G A+ ++ + +T+ T Y+ PE
Sbjct: 162 LLYTSKRPNAILKLTDFGFAK-------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 214
Query: 416 DIYSFGIMLLQIITARSPMGLTH 438
D++S G+++ ++ P H
Sbjct: 215 DMWSLGVIMYILLCGYPPFYSNH 237
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
+V E + G L R+ RG+ R+ +I I A+ +LH + HRD+KP N
Sbjct: 136 IVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 191
Query: 359 ILLDR---NYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS 415
+L N + K++D G A+ ++ + +T+ T Y+ PE
Sbjct: 192 LLYTSKRPNAILKLTDFGFAK-------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 416 DIYSFGIMLLQIITARSPMGLTH 438
D++S G+++ ++ P H
Sbjct: 245 DMWSLGVIMYILLCGYPPFYSNH 267
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
+V E + G L R+ RG+ R+ +I I A+ +LH + HRD+KP N
Sbjct: 98 IVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 153
Query: 359 ILLDR---NYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS 415
+L N + K++D G A+ ++ + +T+ T Y+ PE
Sbjct: 154 LLYTSKRPNAILKLTDFGFAK-------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 206
Query: 416 DIYSFGIMLLQIITARSPMGLTH 438
D++S G+++ ++ P H
Sbjct: 207 DMWSLGVIMYILLCGYPPFYSNH 229
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
+V E + G L R+ RG+ R+ +I I A+ +LH + HRD+KP N
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 145
Query: 359 ILLDR---NYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS 415
+L N + K++D G A+ ++ + +T+ T Y+ PE
Sbjct: 146 LLYTSKRPNAILKLTDFGFAK-------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 198
Query: 416 DIYSFGIMLLQIITARSPMGLTH 438
D++S G+++ ++ P H
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSNH 221
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 26/228 (11%)
Query: 221 IEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQ---FQQEV 275
++E++ + F IG G +G V K+ +T A+K+L + + F++E
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 141
Query: 276 EVLSSIRHPNMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
+VL + + L A D + LV +Y G L LL + + RF I E
Sbjct: 142 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLPEDMARFYIG-E 199
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVG--LARLVPPSVADSVTQYHM 391
+ A+ +HQ VHRD+KP N+LLD N +++D G L +V SV
Sbjct: 200 MVLAIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV----- 251
Query: 392 TSAAGTFCYIDPEYQQT-----GMLTTKSDIYSFGIMLLQIITARSPM 434
A GT YI PE Q G + D +S G+ + +++ +P
Sbjct: 252 --AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
+V E + G L R+ RG+ R+ +I I A+ +LH + HRD+KP N
Sbjct: 142 IVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 197
Query: 359 ILLDR---NYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS 415
+L N + K++D G A+ ++ + +T+ T Y+ PE
Sbjct: 198 LLYTSKRPNAILKLTDFGFAK-------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 250
Query: 416 DIYSFGIMLLQIITARSPMGLTH 438
D++S G+++ ++ P H
Sbjct: 251 DMWSLGVIMYILLCGYPPFYSNH 273
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 101/228 (44%), Gaps = 26/228 (11%)
Query: 221 IEEIEEATDKFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQ---FQQEV 275
++E++ + F IG G +G V K+ +T A+K+L + + F++E
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREER 125
Query: 276 EVLSSIRHPNMVLLLGACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
+VL + + L A D + LV +Y G L LL + + RF I E
Sbjct: 126 DVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLPEDMARFYIG-E 183
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVG--LARLVPPSVADSVTQYHM 391
+ A+ +HQ VHRD+KP N+LLD N +++D G L +V SV
Sbjct: 184 MVLAIDSIHQLH---YVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSV----- 235
Query: 392 TSAAGTFCYIDPEYQQT-----GMLTTKSDIYSFGIMLLQIITARSPM 434
A GT YI PE Q G + D +S G+ + +++ +P
Sbjct: 236 --AVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 21/160 (13%)
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
++A + FL K +HRDL NILL V KI D GLAR +
Sbjct: 206 QVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVRKG 258
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP---MGLTHHVSRAIEKG- 447
A ++ PE + T +SD++SFG++L +I + SP + + R +++G
Sbjct: 259 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 318
Query: 448 -------TLAEMLDPAVTDWPAEAAE--SFSKLAIQCAEL 478
T EM + W E ++ +FS+L L
Sbjct: 319 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ +G G +G V +D T VA+K+L+ A + R
Sbjct: 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 76
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWRK 326
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 77 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS-TYLRSKRNEFVPYKT 135
Query: 327 ---RFKIAAEIATAL 338
RF+ + A+
Sbjct: 136 KGARFRQGKDYVGAI 150
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 21/160 (13%)
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
++A + FL K +HRDL NILL V KI D GLAR +
Sbjct: 208 QVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVRKG 260
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP---MGLTHHVSRAIEKG- 447
A ++ PE + T +SD++SFG++L +I + SP + + R +++G
Sbjct: 261 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 320
Query: 448 -------TLAEMLDPAVTDWPAEAAE--SFSKLAIQCAEL 478
T EM + W E ++ +FS+L L
Sbjct: 321 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ +G G +G V +D T VA+K+L+ A + R
Sbjct: 19 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 78
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWRK 326
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 79 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS-TYLRSKRNEFVPYKT 137
Query: 327 ---RFKIAAEIATAL 338
RF+ + A+
Sbjct: 138 KGARFRQGKDYVGAI 152
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 29/230 (12%)
Query: 221 IEEIEEATDKFSEAMKIGEGGYGPVYRG-KLDHTPVAIKVLRPDAAQGK----------- 268
I E+ ++ I G YG V G + PVAIK + + G+
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 269 RQFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRF 328
++ +E+ +L+ HPN +LG + MH L L+R VI +R
Sbjct: 74 KRVLREIRLLNHFHHPN---ILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH-DQRI 129
Query: 329 KIAAE-----IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVA 383
I+ + + LL LH +VHRDL P NILL N I D LAR A
Sbjct: 130 VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTA 186
Query: 384 DSVTQYHMTSAAGTFCYIDPE-YQQTGMLTTKSDIYSFGIMLLQIITARS 432
D+ +++T Y PE Q T D++S G ++ ++ ++
Sbjct: 187 DANKTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 109/267 (40%), Gaps = 42/267 (15%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y L+ K+ RP + KR ++ E+ ++ + H
Sbjct: 27 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 85
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + + L+ VI + ++ E + LL+
Sbjct: 86 NIIGLLNVFTPQKSL--EEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLC 139
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + M
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMVPFVV 189
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT---- 448
T Y PE DI+S G ++ ++I T H+ ++ IE+ GT
Sbjct: 190 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE 249
Query: 449 LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V + P A SF KL
Sbjct: 250 FMKKLQPTVRTYVENRPKYAGYSFEKL 276
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
+V E + G L R+ RG+ R+ +I I A+ +LH + HRD+KP N
Sbjct: 91 IVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 146
Query: 359 ILLDR---NYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS 415
+L N + K++D G A+ ++ + +T+ T Y+ PE
Sbjct: 147 LLYTSKRPNAILKLTDFGFAK-------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 199
Query: 416 DIYSFGIMLLQIITARSPMGLTH 438
D++S G+++ ++ P H
Sbjct: 200 DMWSLGVIMYILLCGYPPFYSNH 222
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 19/177 (10%)
Query: 264 AAQGKRQFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSL-EDRLLRRGNTP 320
+A+ ++ ++E + ++HPN+V L + + G L+++ + G L ED + R +
Sbjct: 61 SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE 120
Query: 321 VIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLD---RNYVSKISDVGLARL 377
+I A+L HQ +VHRDLKP N+LL + K++D GLA
Sbjct: 121 A----DASHCIQQILEAVLHCHQMG---VVHRDLKPENLLLASKLKGAAVKLADFGLA-- 171
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ Q AGT Y+ PE + D+++ G++L ++ P
Sbjct: 172 ----IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
+V E + G L R+ RG+ R+ +I I A+ +LH + HRD+KP N
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 147
Query: 359 ILLDR---NYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS 415
+L N + K++D G A+ ++ + +T+ T Y+ PE
Sbjct: 148 LLYTSKRPNAILKLTDFGFAK-------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 416 DIYSFGIMLLQIITARSPMGLTH 438
D++S G+++ ++ P H
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSNH 223
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
+V E + G L R+ RG+ R+ +I I A+ +LH + HRD+KP N
Sbjct: 92 IVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 147
Query: 359 ILLDR---NYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS 415
+L N + K++D G A+ ++ + +T+ T Y+ PE
Sbjct: 148 LLYTSKRPNAILKLTDFGFAK-------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 200
Query: 416 DIYSFGIMLLQIITARSPMGLTH 438
D++S G+++ ++ P H
Sbjct: 201 DMWSLGVIMYILLCGYPPFYSNH 223
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
+V E + G L R+ RG+ R+ +I I A+ +LH + HRD+KP N
Sbjct: 96 IVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 151
Query: 359 ILLDR---NYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS 415
+L N + K++D G A+ ++ + +T+ T Y+ PE
Sbjct: 152 LLYTSKRPNAILKLTDFGFAK-------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 204
Query: 416 DIYSFGIMLLQIITARSPMGLTH 438
D++S G+++ ++ P H
Sbjct: 205 DMWSLGVIMYILLCGYPPFYSNH 227
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
+V E + G L R+ RG+ R+ +I I A+ +LH + HRD+KP N
Sbjct: 97 IVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 152
Query: 359 ILLDR---NYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS 415
+L N + K++D G A+ ++ + +T+ T Y+ PE
Sbjct: 153 LLYTSKRPNAILKLTDFGFAK-------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 205
Query: 416 DIYSFGIMLLQIITARSPMGLTH 438
D++S G+++ ++ P H
Sbjct: 206 DMWSLGVIMYILLCGYPPFYSNH 228
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 21/160 (13%)
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
++A + FL K +HRDL NILL V KI D GLAR +
Sbjct: 199 QVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVRKG 251
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP---MGLTHHVSRAIEKG- 447
A ++ PE + T +SD++SFG++L +I + SP + + R +++G
Sbjct: 252 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 311
Query: 448 -------TLAEMLDPAVTDWPAEAAE--SFSKLAIQCAEL 478
T EM + W E ++ +FS+L L
Sbjct: 312 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ +G G +G V +D T VA+K+L+ A + R
Sbjct: 10 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 69
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWRK 326
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 70 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST-YLRSKRNEFVPYKT 128
Query: 327 ---RFKIAAEIATAL 338
RF+ + A+
Sbjct: 129 KGARFRQGKDYVGAI 143
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 225 EEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLS--- 279
E+ D++ IG+G +G V + +++ VAIK+++ A Q Q EV +L
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA-FLNQAQIEVRLLELMN 108
Query: 280 --------SIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIA 331
I H + ++ CLV+E M + +L D LLR N + K A
Sbjct: 109 KHDTEMKYYIVHLKRHFMF---RNHLCLVFE-MLSYNLYD-LLRNTNFRGVSLNLTRKFA 163
Query: 332 AEIATALLFLHQAKPE-PLVHRDLKPANILL--DRNYVSKISDVG 373
++ TALLFL A PE ++H DLKP NILL + KI D G
Sbjct: 164 QQMCTALLFL--ATPELSIIHCDLKPENILLCNPKRXAIKIVDFG 206
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 21/160 (13%)
Query: 333 EIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMT 392
++A + FL K +HRDL NILL V KI D GLAR +
Sbjct: 201 QVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLAR----DIYKDPDYVRKG 253
Query: 393 SAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIIT-ARSP---MGLTHHVSRAIEKG- 447
A ++ PE + T +SD++SFG++L +I + SP + + R +++G
Sbjct: 254 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT 313
Query: 448 -------TLAEMLDPAVTDWPAEAAE--SFSKLAIQCAEL 478
T EM + W E ++ +FS+L L
Sbjct: 314 RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 219 YTIEEIEEATDKFSEAMKIGEGGYGPVYRGK---LDHTP----VAIKVLRPDAAQGK-RQ 270
Y + E D+ +G G +G V +D T VA+K+L+ A + R
Sbjct: 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRA 71
Query: 271 FQQEVEVLSSI-RHPNMVLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWRK 326
E+++L I H N+V LLGAC G ++ E+ G+L LR +P++
Sbjct: 72 LMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLST-YLRSKRNEFVPYKT 130
Query: 327 ---RFKIAAEIATAL 338
RF+ + A+
Sbjct: 131 KGARFRQGKDYVGAI 145
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 29/230 (12%)
Query: 221 IEEIEEATDKFSEAMKIGEGGYGPVYRG-KLDHTPVAIKVLRPDAAQGK----------- 268
I E+ ++ I G YG V G + PVAIK + + G+
Sbjct: 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 269 RQFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRF 328
++ +E+ +L+ HPN +LG + MH L L+R VI +R
Sbjct: 74 KRVLREIRLLNHFHHPN---ILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH-DQRI 129
Query: 329 KIAAE-----IATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVA 383
I+ + + LL LH +VHRDL P NILL N I D LAR A
Sbjct: 130 VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR---EDTA 186
Query: 384 DSVTQYHMTSAAGTFCYIDPE-YQQTGMLTTKSDIYSFGIMLLQIITARS 432
D+ +++T Y PE Q T D++S G ++ ++ ++
Sbjct: 187 DANKTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 93/220 (42%), Gaps = 26/220 (11%)
Query: 227 ATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQ--QEVEVLSSIR 282
+ D++ K+GEG YG VY+ + + VAIK +R + + +EV +L ++
Sbjct: 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ 91
Query: 283 HPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF 340
H N++ L L++EY N D P + R ++ + F
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEYAEN----DLKKYMDKNPDVSMRVIKSFLYQLINGVNF 147
Query: 341 LHQAKPEPLVHRDLKPANILL-----DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
H + +HRDLKP N+LL V KI D GLAR A + T
Sbjct: 148 CHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR------AFGIPIRQFTHEI 198
Query: 396 GTFCYIDPE-YQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
T Y PE + +T DI+S + +++ ++P+
Sbjct: 199 ITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML-MKTPL 237
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 79/165 (47%), Gaps = 24/165 (14%)
Query: 225 EEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVLS--- 279
E+ D++ IG+G +G V + +++ VAIK+++ A Q Q EV +L
Sbjct: 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA-FLNQAQIEVRLLELMN 108
Query: 280 --------SIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIA 331
I H + ++ CLV+E M + +L D LLR N + K A
Sbjct: 109 KHDTEMKYYIVHLKRHFMF---RNHLCLVFE-MLSYNLYD-LLRNTNFRGVSLNLTRKFA 163
Query: 332 AEIATALLFLHQAKPE-PLVHRDLKPANILL--DRNYVSKISDVG 373
++ TALLFL A PE ++H DLKP NILL + KI D G
Sbjct: 164 QQMCTALLFL--ATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 206
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 237 IGEGGYGPVYRG--KLDHTPVAIKVL-RPDAAQ--GKRQFQQEVEVLSSIRHPNMVLLLG 291
+G G YG V K VAIK L RP ++ KR ++ E+ +L ++H N++ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLD 90
Query: 292 ACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
L Y++ L++ K + ++ L ++H A +
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAG---V 147
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDLKP N+ ++ + KI D GLAR AD+ MT T Y PE +
Sbjct: 148 VHRDLKPGNLAVNEDCELKILDFGLARH-----ADA----EMTGYVVTRWYRAPEVILSW 198
Query: 410 MLTTKS-DIYSFGIMLLQIITARS 432
M ++ DI+S G ++ +++T ++
Sbjct: 199 MHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 36/233 (15%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP-DAAQGKRQF 271
YR+ + + E + +G G YG V Y +L K+ RP + R+
Sbjct: 15 YRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRT 74
Query: 272 QQEVEVLSSIRHPNMVLLLG------ACPDYG--CLVYEYMH---NGSLEDRLLRRGNTP 320
+E+ +L ++H N++ LL + D+ LV M N ++ + L +
Sbjct: 75 YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQ 134
Query: 321 VIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPP 380
+ + ++ L ++H A ++HRDLKP+N+ ++ + +I D GLAR
Sbjct: 135 FLVY--------QLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR---- 179
Query: 381 SVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARS 432
AD MT T Y PE M ++ DI+S G ++ +++ ++
Sbjct: 180 -QADE----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 44/268 (16%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVL-RP--DAAQGKRQFQQEVEVLSSIRH 283
++ IG G G V Y LD VAIK L RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNH 82
Query: 284 PNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF--- 340
N++ LL L E + L L+ VI + ++ E + LL+
Sbjct: 83 KNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLXQVI----QMELDHERMSYLLYQML 136
Query: 341 -----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 137 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-------TAGTSFMMTPYV 186
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT--- 448
T Y PE DI+S G ++ +++ + ++ ++ IE+ GT
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 449 -LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V ++ P A +F KL
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 24/169 (14%)
Query: 221 IEEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPDAAQGKRQFQQEVEVL 278
++ E+ D++ IG+G +G V + +++ VAIK+++ A Q Q EV +L
Sbjct: 27 VKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKA-FLNQAQIEVRLL 85
Query: 279 S-----------SIRHPNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKR 327
I H + ++ CLV+E M + +L D LLR N +
Sbjct: 86 ELMNKHDTEMKYYIVHLKRHFMF---RNHLCLVFE-MLSYNLYD-LLRNTNFRGVSLNLT 140
Query: 328 FKIAAEIATALLFLHQAKPE-PLVHRDLKPANILL--DRNYVSKISDVG 373
K A ++ TALLFL A PE ++H DLKP NILL + KI D G
Sbjct: 141 RKFAQQMCTALLFL--ATPELSIIHCDLKPENILLCNPKRSAIKIVDFG 187
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 237 IGEGGYGPVYRG--KLDHTPVAIKVL-RPDAAQ--GKRQFQQEVEVLSSIRHPNMVLLLG 291
+G G YG V K VAIK L RP ++ KR ++ E+ +L ++H N++ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLD 108
Query: 292 ACPDYGCL--VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
L Y++ L++ K + ++ L ++H A +
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAG---V 165
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
VHRDLKP N+ ++ + KI D GLAR AD+ MT T Y PE +
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLARH-----ADA----EMTGYVVTRWYRAPEVILSW 216
Query: 410 MLTTKS-DIYSFGIMLLQIITARS 432
M ++ DI+S G ++ +++T ++
Sbjct: 217 MHYNQTVDIWSVGCIMAEMLTGKT 240
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 14/143 (9%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
+V E + G L R+ RG+ R+ +I I A+ +LH + HRD+KP N
Sbjct: 90 IVMECLDGGELFSRIQDRGDQAFTE-REASEIMKSIGEAIQYLHSIN---IAHRDVKPEN 145
Query: 359 ILLDR---NYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS 415
+L N + K++D G A+ ++ + +T T Y+ PE
Sbjct: 146 LLYTSKRPNAILKLTDFGFAK-------ETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSC 198
Query: 416 DIYSFGIMLLQIITARSPMGLTH 438
D++S G+++ ++ P H
Sbjct: 199 DMWSLGVIMYILLCGYPPFYSNH 221
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 94/219 (42%), Gaps = 40/219 (18%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQ---FQQEVEVLSSIRHPNMVLLLG 291
IG G +G V KL + A+K+L + + F++E +VL + + L
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 292 ACPDYG--CLVYEYMHNGSL-------EDRLLRRGNTPVIPWRKRFKIAAEIATALLFLH 342
A D LV +Y G L EDRL RF +A E+ A+ +H
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEE--------MARFYLA-EMVIAIDSVH 192
Query: 343 QAKPEPLVHRDLKPANILLDRNYVSKISDVG--LARLVPPSVADSVTQYHMTSAAGTFCY 400
Q VHRD+KP NIL+D N +++D G L + +V SV A GT Y
Sbjct: 193 QLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSV-------AVGTPDY 242
Query: 401 IDPEYQQT-----GMLTTKSDIYSFGIMLLQIITARSPM 434
I PE Q G + D +S G+ + +++ +P
Sbjct: 243 ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 49/238 (20%)
Query: 223 EIEEATDKFS-EAMKIGEGGYGPVYRG--------------KLDHTPVAIKVLRPDAAQG 267
E E D F E K+G G YG VY+ +++ T +++ R
Sbjct: 14 ERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACR------ 67
Query: 268 KRQFQQEVEVLSSIRHPNMV----LLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP 323
E+ +L ++HPN++ + L L+++Y + R +
Sbjct: 68 ------EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKAN-- 119
Query: 324 WRKRFKIAAEIATALLF-----LHQAKPEPLVHRDLKPANILL-----DRNYVSKISDVG 373
+K ++ + +LL+ +H ++HRDLKPANIL+ +R V KI+D+G
Sbjct: 120 -KKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRV-KIADMG 177
Query: 374 LARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITA 430
ARL + + TF Y PE TK+ DI++ G + +++T+
Sbjct: 178 FARLFNSPLKPLAD---LDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTS 232
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 44/268 (16%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVL-RP--DAAQGKRQFQQEVEVLSSIRH 283
++ IG G G V Y LD VAIK L RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 284 PNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF--- 340
N++ LL L E + L L+ VI + ++ E + LL+
Sbjct: 83 KNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLXQVI----QMELDHERMSYLLYQML 136
Query: 341 -----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 137 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-------TAGTSFMMTPYV 186
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT--- 448
T Y PE DI+S G ++ +++ + ++ ++ IE+ GT
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 449 -LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V ++ P A +F KL
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 44/268 (16%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVL-RP--DAAQGKRQFQQEVEVLSSIRH 283
++ IG G G V Y LD VAIK L RP + KR ++ E+ ++ + H
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 75
Query: 284 PNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF--- 340
N++ LL L E + L L+ VI + ++ E + LL+
Sbjct: 76 KNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLXQVI----QMELDHERMSYLLYQML 129
Query: 341 -----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 130 XGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-------TAGTSFMMTPYV 179
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT--- 448
T Y PE DI+S G ++ +++ + ++ ++ IE+ GT
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 239
Query: 449 -LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V ++ P A +F KL
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKL 267
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 111/267 (41%), Gaps = 42/267 (15%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y LD K+ RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHK 83
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + L L+ VI + ++ E + LL+
Sbjct: 84 NIISLLNVFTPQKTL--EEFQDVYLVMELMDANLXQVI----QMELDHERMSYLLYQMLC 137
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-------TAGTSFMMTPYVV 187
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT---- 448
T Y PE DI+S G ++ +++ + ++ ++ IE+ GT
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 449 LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V ++ P A +F KL
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 44/268 (16%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVL-RP--DAAQGKRQFQQEVEVLSSIRH 283
++ IG G G V Y LD VAIK L RP + KR ++ E+ ++ + H
Sbjct: 24 RYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 81
Query: 284 PNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF--- 340
N++ LL L E + L L+ VI + ++ E + LL+
Sbjct: 82 KNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQML 135
Query: 341 -----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 136 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYV 185
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT--- 448
T Y PE DI+S G ++ +++ + ++ ++ IE+ GT
Sbjct: 186 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 245
Query: 449 -LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V ++ P A +F KL
Sbjct: 246 EFMKKLQPTVRNYVENRPKYAGLTFPKL 273
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 111/267 (41%), Gaps = 42/267 (15%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y LD K+ RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVNHK 83
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + L L+ VI + ++ E + LL+
Sbjct: 84 NIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLC 137
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR-------TAGTSFMMTPYVV 187
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT---- 448
T Y PE DI+S G ++ +++ + ++ ++ IE+ GT
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 449 LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V ++ P A +F KL
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 92/226 (40%), Gaps = 30/226 (13%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ + IG G G V + L K+ RP + KR ++ E+ +L + H
Sbjct: 25 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHK 83
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + L L+ VI ++ E + LL+
Sbjct: 84 NIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVI----HMELDHERMSYLLYQMLC 137
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TACTNFMMTPYVV 187
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSR 442
T Y PE DI+S G ++ +++ T H+ +
Sbjct: 188 TRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQ 233
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 44/268 (16%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVL-RP--DAAQGKRQFQQEVEVLSSIRH 283
++ IG G G V Y LD VAIK L RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 284 PNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF--- 340
N++ LL L E + L L+ VI + ++ E + LL+
Sbjct: 83 KNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQML 136
Query: 341 -----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYV 186
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT--- 448
T Y PE DI+S G ++ +++ + ++ ++ IE+ GT
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 449 -LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V ++ P A +F KL
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 86/222 (38%), Gaps = 39/222 (17%)
Query: 237 IGEGGYGPVYRGKLDHTP--VAIKV------LRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
+G+G V+RG+ T AIKV LRP Q +E EVL + H N+V
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ-----MREFEVLKKLNHKNIVK 71
Query: 289 LLG----ACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQA 344
L + L+ E+ GSL L N +P + + ++ + +
Sbjct: 72 LFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGM---NHL 128
Query: 345 KPEPLVHRDLKPANILL----DRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCY 400
+ +VHR++KP NI+ D V K++D G AR + GT Y
Sbjct: 129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE-------DDEQFVXLYGTEEY 181
Query: 401 IDPEYQQTGML--------TTKSDIYSFGIMLLQIITARSPM 434
+ P+ + +L D++S G+ T P
Sbjct: 182 LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 44/268 (16%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVL-RP--DAAQGKRQFQQEVEVLSSIRH 283
++ IG G G V Y LD VAIK L RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 82
Query: 284 PNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF--- 340
N++ LL L E + L L+ VI + ++ E + LL+
Sbjct: 83 KNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQML 136
Query: 341 -----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 137 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYV 186
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT--- 448
T Y PE DI+S G ++ +++ + ++ ++ IE+ GT
Sbjct: 187 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 246
Query: 449 -LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V ++ P A +F KL
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKL 274
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 15/145 (10%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
LV+E M GS+ + +R + + + + ++A+AL FLH + + HRDLKP N
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNEL---EASVVVQDVASALDFLHN---KGIAHRDLKPEN 141
Query: 359 ILLDR-NYVS--KISDVGLARLVPPSVADS-VTQYHMTSAAGTFCYIDPEY-----QQTG 409
IL + N VS KI D L + + S ++ + + G+ Y+ PE ++
Sbjct: 142 ILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEAS 201
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
+ + D++S G++L +++ P
Sbjct: 202 IYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 44/268 (16%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVL-RP--DAAQGKRQFQQEVEVLSSIRH 283
++ IG G G V Y LD VAIK L RP + KR ++ E+ ++ + H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 83
Query: 284 PNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF--- 340
N++ LL L E + L L+ VI + ++ E + LL+
Sbjct: 84 KNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQML 137
Query: 341 -----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 138 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYV 187
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT--- 448
T Y PE DI+S G ++ +++ + ++ ++ IE+ GT
Sbjct: 188 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 247
Query: 449 -LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V ++ P A +F KL
Sbjct: 248 EFMKKLQPTVRNYVENRPKYAGLTFPKL 275
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 111/267 (41%), Gaps = 42/267 (15%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y LD K+ RP + KR ++ E+ ++ + H
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 84
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + L L+ VI + ++ E + LL+
Sbjct: 85 NIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLC 138
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 188
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT---- 448
T Y PE DI+S G ++ +++ + ++ ++ IE+ GT
Sbjct: 189 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 248
Query: 449 LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V ++ P A +F KL
Sbjct: 249 FMKKLQPTVRNYVENRPKYAGLTFPKL 275
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 106/233 (45%), Gaps = 31/233 (13%)
Query: 230 KFSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMV 287
++ + +G GG G V+ + VAIK + Q + +E++++ + H N+V
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIV 71
Query: 288 L---LLGA-----CPDYGCL--------VYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIA 331
+LG D G L V EYM +L +G P++ R
Sbjct: 72 KVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDL--ANVLEQG--PLLEEHARL-FM 126
Query: 332 AEIATALLFLHQAKPEPLVHRDLKPANILLD-RNYVSKISDVGLARLVPPSVADSVTQYH 390
++ L ++H A ++HRDLKPAN+ ++ + V KI D GLAR++ P + + H
Sbjct: 127 YQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH---KGH 180
Query: 391 MTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPMGLTHHVSR 442
++ T Y P + TK+ D+++ G + +++T ++ H + +
Sbjct: 181 LSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQ 233
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 44/268 (16%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVL-RP--DAAQGKRQFQQEVEVLSSIRH 283
++ IG G G V Y LD VAIK L RP + KR ++ E+ ++ + H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 76
Query: 284 PNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF--- 340
N++ LL L E + L L+ VI + ++ E + LL+
Sbjct: 77 KNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQML 130
Query: 341 -----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 131 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYV 180
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT--- 448
T Y PE DI+S G ++ +++ + ++ ++ IE+ GT
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 240
Query: 449 -LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V ++ P A +F KL
Sbjct: 241 EFMKKLQPTVRNYVENRPKYAGLTFPKL 268
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 44/268 (16%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVL-RP--DAAQGKRQFQQEVEVLSSIRH 283
++ IG G G V Y LD VAIK L RP + KR ++ E+ ++ + H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 76
Query: 284 PNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF--- 340
N++ LL L E + L L+ VI + ++ E + LL+
Sbjct: 77 KNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQML 130
Query: 341 -----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 131 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYV 180
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT--- 448
T Y PE DI+S G ++ +++ + ++ ++ IE+ GT
Sbjct: 181 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 240
Query: 449 -LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V ++ P A +F KL
Sbjct: 241 EFMKKLQPTVRNYVENRPKYAGLTFPKL 268
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 44/268 (16%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVL-RP--DAAQGKRQFQQEVEVLSSIRH 283
++ IG G G V Y LD VAIK L RP + KR ++ E+ ++ + H
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 75
Query: 284 PNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF--- 340
N++ LL L E + L L+ VI + ++ E + LL+
Sbjct: 76 KNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQML 129
Query: 341 -----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 130 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYV 179
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT--- 448
T Y PE DI+S G ++ +++ + ++ ++ IE+ GT
Sbjct: 180 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 239
Query: 449 -LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V ++ P A +F KL
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKL 267
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 47/222 (21%)
Query: 236 KIGEGGYGPVYRGKLDH----TPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPN-----M 286
+GEG +G V LDH + VA+K++R + + + + E+ VL I+ + +
Sbjct: 35 NLGEGTFGKVVEC-LDHARGKSQVALKIIR-NVGKYREAARLEINVLKKIKEKDKENKFL 92
Query: 287 VLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQ 343
+L+ ++ C+ +E + + E L+ N P +A ++ AL FLH+
Sbjct: 93 CVLMSDWFNFHGHMCIAFELLGKNTFE--FLKENNFQPYPLPHVRHMAYQLCHALRFLHE 150
Query: 344 AKPEPLVHRDLKPANILL-------------------DRNYVSKISDVGLARLVPPSVAD 384
+ L H DLKP NIL +N +++D G A
Sbjct: 151 NQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--------- 198
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQ 426
+ H T+ T Y PE D++S G +L +
Sbjct: 199 TFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 240
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 109/267 (40%), Gaps = 42/267 (15%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ + IG G G V + L K+ RP + KR ++ E+ +L + H
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHK 81
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + L L+ VI ++ E + LL+
Sbjct: 82 NIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVI----HMELDHERMSYLLYQMLC 135
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TASTNFMMTPYVV 185
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT---- 448
T Y PE DI+S G ++ +++ T H+ ++ IE+ GT
Sbjct: 186 TRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAE 245
Query: 449 LAEMLDPAVTDW----PAEAAESFSKL 471
L P V ++ PA +F +L
Sbjct: 246 FMAALQPTVRNYVENRPAYPGIAFEEL 272
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 89/212 (41%), Gaps = 30/212 (14%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y LD K+ RP + KR ++ E+ ++ + H
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 121
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + L L+ VI + ++ E + LL+
Sbjct: 122 NIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQMLC 175
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 225
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQII 428
T Y PE DI+S G ++ +++
Sbjct: 226 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 299 LVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPAN 358
+V E + G L R+ RG+ R+ +I I A+ +LH + HRD+KP N
Sbjct: 136 IVXECLDGGELFSRIQDRGDQAFTE-REASEIXKSIGEAIQYLHSIN---IAHRDVKPEN 191
Query: 359 ILLDR---NYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS 415
+L N + K++D G A+ ++ + +T+ T Y+ PE
Sbjct: 192 LLYTSKRPNAILKLTDFGFAK-------ETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSC 244
Query: 416 DIYSFGIMLLQIITARSPMGLTH 438
D +S G++ ++ P H
Sbjct: 245 DXWSLGVIXYILLCGYPPFYSNH 267
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 44/268 (16%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVL-RP--DAAQGKRQFQQEVEVLSSIRH 283
++ IG G G V Y LD VAIK L RP + KR ++ E+ ++ + H
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRN-VAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNH 120
Query: 284 PNMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF--- 340
N++ LL L E + L L+ VI + ++ E + LL+
Sbjct: 121 KNIISLLNVFTPQKTL--EEFQDVYLVMELMDANLCQVI----QMELDHERMSYLLYQML 174
Query: 341 -----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAA 395
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 175 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYV 224
Query: 396 GTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT--- 448
T Y PE DI+S G ++ +++ + ++ ++ IE+ GT
Sbjct: 225 VTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 284
Query: 449 -LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V ++ P A +F KL
Sbjct: 285 EFMKKLQPTVRNYVENRPKYAGLTFPKL 312
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 47/222 (21%)
Query: 236 KIGEGGYGPVYRGKLDH----TPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPN-----M 286
+GEG +G V LDH + VA+K++R + + + + E+ VL I+ + +
Sbjct: 58 NLGEGTFGKVVEC-LDHARGKSQVALKIIR-NVGKYREAARLEINVLKKIKEKDKENKFL 115
Query: 287 VLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQ 343
+L+ ++ C+ +E + + E L+ N P +A ++ AL FLH+
Sbjct: 116 CVLMSDWFNFHGHMCIAFELLGKNTFE--FLKENNFQPYPLPHVRHMAYQLCHALRFLHE 173
Query: 344 AKPEPLVHRDLKPANILL-------------------DRNYVSKISDVGLARLVPPSVAD 384
+ L H DLKP NIL +N +++D G A
Sbjct: 174 NQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--------- 221
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQ 426
+ H T+ T Y PE D++S G +L +
Sbjct: 222 TFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 263
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 47/222 (21%)
Query: 236 KIGEGGYGPVYRGKLDH----TPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPN-----M 286
+GEG +G V LDH + VA+K++R + + + + E+ VL I+ + +
Sbjct: 26 NLGEGTFGKVVEC-LDHARGKSQVALKIIR-NVGKYREAARLEINVLKKIKEKDKENKFL 83
Query: 287 VLLLGACPDYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQ 343
+L+ ++ C+ +E + + E L+ N P +A ++ AL FLH+
Sbjct: 84 CVLMSDWFNFHGHMCIAFELLGKNTFE--FLKENNFQPYPLPHVRHMAYQLCHALRFLHE 141
Query: 344 AKPEPLVHRDLKPANILL-------------------DRNYVSKISDVGLARLVPPSVAD 384
+ L H DLKP NIL +N +++D G A
Sbjct: 142 NQ---LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--------- 189
Query: 385 SVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQ 426
+ H T+ T Y PE D++S G +L +
Sbjct: 190 TFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFE 231
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 36/233 (15%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP-DAAQGKRQF 271
YR+ + + E + +G G YG V Y +L K+ RP + R+
Sbjct: 15 YRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRT 74
Query: 272 QQEVEVLSSIRHPNMVLLLG------ACPDYG--CLVYEYMH---NGSLEDRLLRRGNTP 320
+E+ +L ++H N++ LL + D+ LV M N ++ + L +
Sbjct: 75 YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQ 134
Query: 321 VIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPP 380
+ + ++ L ++H A ++HRDLKP+N+ ++ + +I D GLAR
Sbjct: 135 FLVY--------QLLRGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLAR---- 179
Query: 381 SVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARS 432
AD MT T Y PE M ++ DI+S G ++ +++ ++
Sbjct: 180 -QADE----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 227
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 101/233 (43%), Gaps = 36/233 (15%)
Query: 216 YRKYTIEEIEEATDKFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP-DAAQGKRQF 271
YR+ + + E + +G G YG V Y +L K+ RP + R+
Sbjct: 7 YRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRT 66
Query: 272 QQEVEVLSSIRHPNMVLLLG------ACPDYG--CLVYEYMH---NGSLEDRLLRRGNTP 320
+E+ +L ++H N++ LL + D+ LV M N ++ + L +
Sbjct: 67 YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQ 126
Query: 321 VIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPP 380
+ + ++ L ++H A ++HRDLKP+N+ ++ + +I D GLAR
Sbjct: 127 FLVY--------QLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLAR---- 171
Query: 381 SVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARS 432
AD MT T Y PE M ++ DI+S G ++ +++ ++
Sbjct: 172 -QADE----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 219
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 19/177 (10%)
Query: 264 AAQGKRQFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSL-EDRLLRRGNTP 320
+A+ ++ ++E + ++HPN+V L + + G L+++ + G L ED + R +
Sbjct: 50 SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSE 109
Query: 321 VIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLD---RNYVSKISDVGLARL 377
+I A+L HQ +VHR+LKP N+LL + K++D GLA
Sbjct: 110 A----DASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLA-- 160
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ Q AGT Y+ PE + D+++ G++L ++ P
Sbjct: 161 ----IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 268 KRQFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWR 325
+ + ++EV +L + H N++ L + L+ E + G L D L ++ + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEE 115
Query: 326 KRFKIAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNYVS---KISDVGLARLVPPS 381
+ +I + +LH K + H DLKP NI LLD+N K+ D GLA +
Sbjct: 116 EATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 382 VADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
V + GT ++ PE L ++D++S G++ +++ SP
Sbjct: 173 V-------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 29/240 (12%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTPV-AIKVLRPDAAQGKR--QFQQEVEVLSSIR-HPNM 286
+S +IG GG V++ + + AIK + + A + ++ E+ L+ ++ H +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 287 VLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
++ L +Y M G+++ + + PW ++ + L +H
Sbjct: 118 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQ 173
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPE-- 404
+VH DLKPAN L+ + K+ D G+A + P V S GT Y+ PE
Sbjct: 174 HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKD----SQVGTVNYMPPEAI 228
Query: 405 -----YQQTG----MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDP 455
++ G ++ KSD++S G +L + ++P + I K L ++DP
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISK--LHAIIDP 283
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 98/224 (43%), Gaps = 49/224 (21%)
Query: 231 FSEAMKIGEGGYGPVYRGKL-DHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLL 289
++ IG G +G V++ KL + VAIK Q KR +E++++ ++HPN+V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEVAIK----KVLQDKRFKNRELQIMRIVKHPNVV-- 95
Query: 290 LGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIP---WRKRFKIAA-------------- 332
D Y NG +D + +P +R A
Sbjct: 96 -----DLKAFFYS---NGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM 147
Query: 333 -EIATALLFLHQAKPEPLVHRDLKPANILLD-RNYVSKISDVGLARLV---PPSVADSVT 387
++ +L ++H + HRD+KP N+LLD + V K+ D G A+++ P+V+ +
Sbjct: 148 YQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICS 204
Query: 388 QYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITAR 431
+Y+ A + Y TT DI+S G ++ +++ +
Sbjct: 205 RYY---RAPELIFGATNY------TTNIDIWSTGCVMAELMQGQ 239
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 225 EEATDKFSEAMKIGEGGYGPVYRGKLDHTPV--AIKVLRPDAAQGKR------QFQQEVE 276
++ D + ++G G + V + + T + A K ++ ++ R + ++EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 277 VLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEI 334
+L + H N++ L + L+ E + G L D L ++ + + + +I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQI 124
Query: 335 ATALLFLHQAKPEPLVHRDLKPANI-LLDRNY---VSKISDVGLARLVPPSVADSVTQYH 390
+ +LH K + H DLKP NI LLD+N K+ D GLA + V
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-------E 174
Query: 391 MTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ GT ++ PE L ++D++S G++ +++ SP
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 225 EEATDKFSEAMKIGEGGYGPVYRGKLDHTPV--AIKVLRPDAAQGKR------QFQQEVE 276
++ D + ++G G + V + + T + A K ++ ++ R + ++EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 277 VLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEI 334
+L + H N++ L + L+ E + G L D L ++ + + + +I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQI 124
Query: 335 ATALLFLHQAKPEPLVHRDLKPANI-LLDRNY---VSKISDVGLARLVPPSVADSVTQYH 390
+ +LH K + H DLKP NI LLD+N K+ D GLA + V
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-------E 174
Query: 391 MTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ GT ++ PE L ++D++S G++ +++ SP
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 19/173 (10%)
Query: 268 KRQFQQEVEVLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWR 325
+ + ++EV +L + H N++ L + L+ E + G L D L ++ + +
Sbjct: 59 REEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEE 115
Query: 326 KRFKIAAEIATALLFLHQAKPEPLVHRDLKPANI-LLDRNY---VSKISDVGLARLVPPS 381
+ +I + +LH K + H DLKP NI LLD+N K+ D GLA +
Sbjct: 116 EATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 382 VADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
V + GT ++ PE L ++D++S G++ +++ SP
Sbjct: 173 V-------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 29/240 (12%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTPV-AIKVLRPDAAQGKR--QFQQEVEVLSSIR-HPNM 286
+S +IG GG V++ + + AIK + + A + ++ E+ L+ ++ H +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 287 VLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
++ L +Y M G+++ + + PW ++ + L +H
Sbjct: 118 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQ 173
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPE-- 404
+VH DLKPAN L+ + K+ D G+A + P V S GT Y+ PE
Sbjct: 174 HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKD----SQVGTVNYMPPEAI 228
Query: 405 -----YQQTG----MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDP 455
++ G ++ KSD++S G +L + ++P + I K L ++DP
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISK--LHAIIDP 283
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 98/224 (43%), Gaps = 27/224 (12%)
Query: 225 EEATDKFSEAMKIGEGGYGPVYRGKLDHTPV--AIKVLRPDAAQGKR------QFQQEVE 276
++ D + ++G G + V + + T + A K ++ ++ R + ++EV
Sbjct: 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67
Query: 277 VLSSIRHPNMVLLLGACPDYG--CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEI 334
+L + H N++ L + L+ E + G L D L ++ + + + +I
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES---LSEEEATSFIKQI 124
Query: 335 ATALLFLHQAKPEPLVHRDLKPANI-LLDRNY---VSKISDVGLARLVPPSVADSVTQYH 390
+ +LH K + H DLKP NI LLD+N K+ D GLA + V
Sbjct: 125 LDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV-------E 174
Query: 391 MTSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPM 434
+ GT ++ PE L ++D++S G++ +++ SP
Sbjct: 175 FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 103/240 (42%), Gaps = 29/240 (12%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTPV-AIKVLRPDAAQGKR--QFQQEVEVLSSIR-HPNM 286
+S +IG GG V++ + + AIK + + A + ++ E+ L+ ++ H +
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 70
Query: 287 VLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
++ L +Y M G+++ + + PW ++ + L +H
Sbjct: 71 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQ 126
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPE-- 404
+VH DLKPAN L+ + K+ D G+A + P V S GT Y+ PE
Sbjct: 127 HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKD----SQVGTVNYMPPEAI 181
Query: 405 -----YQQTG----MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDP 455
++ G ++ KSD++S G +L + ++P + I K L ++DP
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISK--LHAIIDP 236
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 19/203 (9%)
Query: 231 FSEAMKIGEGGYGPVY--RGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIR---HPN 285
F ++G G YG V+ R K D A+K K + ++ EV S + HP
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 286 MVLLLGACPDYGCLVYEYMHNG-SLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQA 344
V L A + G L + G SL+ G + +P + + + AL LH
Sbjct: 119 CVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGAS--LPEAQVWGYLRDTLLALAHLHS- 175
Query: 345 KPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPE 404
+ LVH D+KPANI L K+ D GL + + A V + G Y+ PE
Sbjct: 176 --QGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQE-------GDPRYMAPE 226
Query: 405 YQQTGMLTTKSDIYSFGIMLLQI 427
Q G T +D++S G+ +L++
Sbjct: 227 LLQ-GSYGTAADVFSLGLTILEV 248
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 86/219 (39%), Gaps = 30/219 (13%)
Query: 236 KIGEGGYGPV--YRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLLGAC 293
K+GEGG+ V G D A+K + Q + + Q+E ++ HPN++ L+ C
Sbjct: 36 KLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 294 ------PDYGCLVYEYMHNGSLED---RLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
L+ + G+L + RL +GN F +I LL
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGN---------FLTEDQILWLLLGICRG 146
Query: 341 LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCY 400
L + HRDLKP NILL + D+G V S + A C
Sbjct: 147 LEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 401 ID---PEY---QQTGMLTTKSDIYSFGIMLLQIITARSP 433
I PE Q ++ ++D++S G +L ++ P
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGP 245
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 229 DKFSEAMKIGEGGYGPVYRG--KLDHTPVAIK-VLR--PDAAQGKRQFQQEVEVLSSIRH 283
D++ IG G YG V KL+ VAIK +LR D KR +E+ +L+ + H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKR-ILREIAILNRLNH 111
Query: 284 PNMVLLLGACPDYGCLVYEYMH-----NGSLEDRLLRRGNTPVIPWRKRFK-IAAEIATA 337
++V +L ++ ++ S +L R TPV K + +
Sbjct: 112 DHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFR---TPVYLTELHIKTLLYNLLVG 168
Query: 338 LLFLHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLV 378
+ ++H A ++HRDLKPAN L++++ K+ D GLAR V
Sbjct: 169 VKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTV 206
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 29/240 (12%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTPV-AIKVLRPDAA--QGKRQFQQEVEVLSSIR-HPNM 286
+S +IG GG V++ + + AIK + + A Q ++ E+ L+ ++ H +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 287 VLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
++ L +Y M G+++ + + PW ++ + L +H
Sbjct: 90 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQ 145
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPE-- 404
+VH DLKPAN L+ + K+ D G+A + P V S GT Y+ PE
Sbjct: 146 HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKD----SQVGTVNYMPPEAI 200
Query: 405 -----YQQTG----MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDP 455
++ G ++ KSD++S G +L + ++P + I K L ++DP
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISK--LHAIIDP 255
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 113/289 (39%), Gaps = 54/289 (18%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y L+ K+ RP + KR ++ E+ ++ + H
Sbjct: 30 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 88
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + + L+ VI + ++ E + LL+
Sbjct: 89 NIIGLLNVFTPQKSL--EEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLC 142
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 192
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPA 456
T Y PE D++S G ++ +++ + +L P
Sbjct: 193 TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK--------------------ILFPG 232
Query: 457 VTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKDLGRKLE 505
D+ + + +L C E KK +P + T + NR K G E
Sbjct: 233 -RDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE---NRPKYAGYSFE 277
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 113/289 (39%), Gaps = 54/289 (18%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y L+ K+ RP + KR ++ E+ ++ + H
Sbjct: 19 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 77
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + + L+ VI + ++ E + LL+
Sbjct: 78 NIIGLLNVFTPQKSL--EEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLC 131
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + MT
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMTPYVV 181
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPA 456
T Y PE D++S G ++ +++ + +L P
Sbjct: 182 TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK--------------------ILFPG 221
Query: 457 VTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKDLGRKLE 505
D+ + + +L C E KK +P + T + NR K G E
Sbjct: 222 -RDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE---NRPKYAGYSFE 266
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 12/158 (7%)
Query: 229 DKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLR---PDAAQGKRQFQQEVEVLSSIRH 283
D + IG G YG VY K + VAIK + D KR +E+ +L+ ++
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKR-ILREITILNRLKS 86
Query: 284 PNMVLLLGACPDYGCLVYE--YMHNGSLEDRLLRRGNTPVIPWRKRFK-IAAEIATALLF 340
++ L L ++ Y+ + L + TP+ + K I + F
Sbjct: 87 DYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKF 146
Query: 341 LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLV 378
+H++ ++HRDLKPAN LL+++ KI D GLAR +
Sbjct: 147 IHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTI 181
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 110/267 (41%), Gaps = 42/267 (15%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y L+ K+ RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + + L+ VI + ++ E + LL+
Sbjct: 84 NIIGLLNVFTPQKSL--EEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLC 137
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + M
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMEPEVV 187
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHV---SRAIEK-GT---- 448
T Y PE DI+S G ++ +++ + ++ ++ IE+ GT
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPA 247
Query: 449 LAEMLDPAVTDW----PAEAAESFSKL 471
+ L P V ++ P A SF KL
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGYSFEKL 274
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 102/240 (42%), Gaps = 29/240 (12%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTPV-AIKVLRPDAAQGKR--QFQQEVEVLSSIR-HPNM 286
+S +IG GG V++ + + AIK + + A + ++ E+ L+ ++ H +
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 117
Query: 287 VLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
++ L +Y M G+++ + + PW ++ + L +H
Sbjct: 118 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQ 173
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPE-- 404
+VH DLKPAN L+ + K+ D G+A + P V S G Y+ PE
Sbjct: 174 HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKD----SQVGAVNYMPPEAI 228
Query: 405 -----YQQTG----MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDP 455
++ G ++ KSD++S G +L + ++P + I K L ++DP
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISK--LHAIIDP 283
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 29/240 (12%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTPV-AIKVLRPDAA--QGKRQFQQEVEVLSSIR-HPNM 286
+S +IG GG V++ + + AIK + + A Q ++ E+ L+ ++ H +
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 69
Query: 287 VLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
++ L +Y M G+++ + + PW ++ + L +H
Sbjct: 70 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQ 125
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPE-- 404
+VH DLKPAN L+ + K+ D G+A + P V S GT Y+ PE
Sbjct: 126 HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKD----SQVGTVNYMPPEAI 180
Query: 405 -----YQQTG----MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDP 455
++ G ++ KSD++S G +L + ++P + I K L ++DP
Sbjct: 181 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISK--LHAIIDP 235
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 29/240 (12%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTPV-AIKVLRPDAA--QGKRQFQQEVEVLSSIR-HPNM 286
+S +IG GG V++ + + AIK + + A Q ++ E+ L+ ++ H +
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 73
Query: 287 VLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
++ L +Y M G+++ + + PW ++ + L +H
Sbjct: 74 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQ 129
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPE-- 404
+VH DLKPAN L+ + K+ D G+A + P V S GT Y+ PE
Sbjct: 130 HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKD----SQVGTVNYMPPEAI 184
Query: 405 -----YQQTG----MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDP 455
++ G ++ KSD++S G +L + ++P + I K L ++DP
Sbjct: 185 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISK--LHAIIDP 239
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 103/240 (42%), Gaps = 29/240 (12%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTPV-AIKVLRPDAA--QGKRQFQQEVEVLSSIR-HPNM 286
+S +IG GG V++ + + AIK + + A Q ++ E+ L+ ++ H +
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK 89
Query: 287 VLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
++ L +Y M G+++ + + PW ++ + L +H
Sbjct: 90 IIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERK----SYWKNMLEAVHTIHQ 145
Query: 347 EPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPE-- 404
+VH DLKPAN L+ + K+ D G+A + P V S GT Y+ PE
Sbjct: 146 HGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDXXXVVKD----SQVGTVNYMPPEAI 200
Query: 405 -----YQQTG----MLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDP 455
++ G ++ KSD++S G +L + ++P + I K L ++DP
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF---QQIINQISK--LHAIIDP 255
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 17/213 (7%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTP--VAIKV--LRPDAAQGKRQFQQEVEVLSSIRHPNM 286
F KIG G +G + GK +T VAIK+ ++ A Q +++ ++ S P
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQ- 69
Query: 287 VLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKP 346
V G C Y +V E + SLED T + IA ++ + + ++H
Sbjct: 70 VYYFGPCGKYNAMVLELL-GPSLEDLFDLCDRT--FSLKTVLMIAIQLISRMEYVHSKN- 125
Query: 347 EPLVHRDLKPANILLDR-----NYVSKISDVGLAR-LVPPSVADSVTQYHMTSAAGTFCY 400
L++RD+KP N L+ R V I D GLA+ + P + S GT Y
Sbjct: 126 --LIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARY 183
Query: 401 IDPEYQQTGMLTTKSDIYSFGIMLLQIITARSP 433
+ + + D+ + G M + + P
Sbjct: 184 MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP 216
>pdb|2WB8|A Chain A, Crystal Structure Of Haspin Kinase
Length = 352
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 228 TDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLR---PDAAQGKRQ 270
T+K KIGEG +G V++ DHTPVAIK++ PD G Q
Sbjct: 35 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQ 80
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 66/154 (42%), Gaps = 13/154 (8%)
Query: 237 IGEGGYGPVYRGK--LDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIR-HPNMVLLLGAC 293
+ EGG+ VY + A+K L + + R QEV + + HPN+V A
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAA 95
Query: 294 P------DYG---CLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQA 344
D G L+ + G L + L + + + KI + A+ +H+
Sbjct: 96 SIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ 155
Query: 345 KPEPLVHRDLKPANILLDRNYVSKISDVGLARLV 378
KP P++HRDLK N+LL K+ D G A +
Sbjct: 156 KP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188
>pdb|3DLZ|A Chain A, Crystal Structure Of Human Haspin In Complex With Amp
pdb|3E7V|A Chain A, Crystal Structure Of Human Haspin With A
Pyrazolo-Pyrimidine Ligand
pdb|3F2N|A Chain A, Crystal Structure Of Human Haspin With An
Imidazo-Pyridazine Ligand
pdb|3FMD|A Chain A, Crystal Structure Of Human Haspin With An Isoquinoline
Ligand
pdb|3IQ7|A Chain A, Crystal Structure Of Human Haspin In Complex With
5-Iodotubercidin
Length = 357
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 228 TDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLR---PDAAQGKRQ 270
T+K KIGEG +G V++ DHTPVAIK++ PD G Q
Sbjct: 40 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQ 85
>pdb|2VUW|A Chain A, Structure Of Human Haspin Kinase Domain
Length = 336
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 228 TDKFSEAMKIGEGGYGPVYRGKLDHTPVAIKVLR---PDAAQGKRQ 270
T+K KIGEG +G V++ DHTPVAIK++ PD G Q
Sbjct: 19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQ 64
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 237 IGEGGYGPVYRGKLDHT--PVAIKVLR---PDAAQGKRQFQQEVEVLSSIRHPNMVLLLG 291
IG G YG VY +T VAIK + D KR +E+ +L+ ++ ++ L
Sbjct: 34 IGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKR-ILREITILNRLKSDYIIRLYD 92
Query: 292 ACPDYGCLVYE--YMHNGSLEDRLLRRGNTPVIPWRKRFK-IAAEIATALLFLHQAKPEP 348
L ++ Y+ + L + TP+ + K I + F+H++
Sbjct: 93 LIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESG--- 149
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVP----------------PSVADSVTQYHMT 392
++HRDLKPAN LL+++ K+ D GLAR + P + + +T
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLT 209
Query: 393 SAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIIT 429
S T Y PE TKS DI+S G + +++
Sbjct: 210 SHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 19/205 (9%)
Query: 237 IGEGGYGPVYR-GKLDHTPVAIKVLRPDA----AQGKRQFQQEVEVLSSIRHPNMVLLLG 291
+G+GG+ Y +D V + P + K + E+ + S+ +P++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 292 AC--PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
D+ +V E SL + L +R P + F + + +LH + +
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYF--MRQTIQGVQYLHNNR---V 163
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDLK N+ L+ + KI D GLA + + GT YI PE
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKI------EFDGERKKTLCGTPNYIAPEVLCKK 217
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
+ + DI+S G +L ++ + P
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 99/247 (40%), Gaps = 49/247 (19%)
Query: 213 DVRYRKYTIEEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD------- 263
+V ++ ++E E ++ +G GG+G VY G D+ PVAIK + D
Sbjct: 15 EVLFQGPHMKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE 74
Query: 264 AAQGKR-------------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSL 309
G R F + +L P+ +L+ P+ +++++ G+L
Sbjct: 75 LPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGAL 134
Query: 310 EDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-K 368
++ L R ++ A+ H ++HRD+K NIL+D N K
Sbjct: 135 QEELAR-------------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELK 178
Query: 369 ISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQI 427
+ D G L+ +V T GT Y PE+ + +S ++S GI+L +
Sbjct: 179 LIDFGSGALLKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDM 230
Query: 428 ITARSPM 434
+ P
Sbjct: 231 VCGDIPF 237
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLL 290
F++ +I + V+ GK+ P ++ +L+P + + E+ + S+ H ++V
Sbjct: 30 FAKCFEISDADTKEVFAGKI--VPKSL-LLKP---HQREKMSMEISIHRSLAHQHVVGFH 83
Query: 291 GACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
G D + +V E SL + L +R P + + +I +LH+ +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY--LRQIVLGCQYLHRNR--- 137
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
++HRDLK N+ L+ + KI D GLA V + GT YI PE
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV------EYDGERKKTLCGTPNYIAPEVLSK 191
Query: 409 GMLTTKSDIYSFGIMLLQIITARSPM 434
+ + D++S G ++ ++ + P
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLL 290
F++ +I + V+ GK+ P ++ +L+P + + E+ + S+ H ++V
Sbjct: 34 FAKCFEISDADTKEVFAGKI--VPKSL-LLKP---HQREKMSMEISIHRSLAHQHVVGFH 87
Query: 291 GACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
G D + +V E SL + L +R P + + +I +LH+ +
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY--LRQIVLGCQYLHRNR--- 141
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
++HRDLK N+ L+ + KI D GLA V + GT YI PE
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV------EYDGERKKTLCGTPNYIAPEVLSK 195
Query: 409 GMLTTKSDIYSFGIMLLQIITARSPM 434
+ + D++S G ++ ++ + P
Sbjct: 196 KGHSFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 20/206 (9%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLL 290
F++ +I + V+ GK+ P ++ +L+P + + E+ + S+ H ++V
Sbjct: 30 FAKCFEISDADTKEVFAGKI--VPKSL-LLKP---HQREKMSMEISIHRSLAHQHVVGFH 83
Query: 291 GACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
G D + +V E SL + L +R P + + +I +LH+ +
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY--LRQIVLGCQYLHRNR--- 137
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
++HRDLK N+ L+ + KI D GLA V + GT YI PE
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV------EYDGERKKTLCGTPNYIAPEVLSK 191
Query: 409 GMLTTKSDIYSFGIMLLQIITARSPM 434
+ + D++S G ++ ++ + P
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 49/239 (20%)
Query: 221 IEEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR-- 269
++E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 270 -----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRG 317
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR-- 118
Query: 318 NTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLAR 376
++ A+ H ++HRD+K NIL+D N K+ D G
Sbjct: 119 -----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGA 164
Query: 377 LVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
L+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 165 LLKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 49/239 (20%)
Query: 221 IEEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR-- 269
++E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 270 -----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRG 317
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR-- 118
Query: 318 NTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLAR 376
++ A+ H ++HRD+K NIL+D N K+ D G
Sbjct: 119 -----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGA 164
Query: 377 LVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
L+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 165 LLKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 19/205 (9%)
Query: 237 IGEGGYGPVYR-GKLDHTPVAIKVLRPDA----AQGKRQFQQEVEVLSSIRHPNMVLLLG 291
+G+GG+ Y +D V + P + K + E+ + S+ +P++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 292 AC--PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
D+ +V E SL + L +R P + F + + +LH + +
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYF--MRQTIQGVQYLHNNR---V 163
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDLK N+ L+ + KI D GLA + GT YI PE
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKI------EFDGERKKDLCGTPNYIAPEVLCKK 217
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
+ + DI+S G +L ++ + P
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 49/239 (20%)
Query: 221 IEEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR-- 269
++E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 1 MKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVP 60
Query: 270 -----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRG 317
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 61 MEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR-- 118
Query: 318 NTPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLAR 376
++ A+ H ++HRD+K NIL+D N K+ D G
Sbjct: 119 -----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGA 164
Query: 377 LVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
L+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 165 LLKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 19/205 (9%)
Query: 237 IGEGGYGPVYR-GKLDHTPVAIKVLRPDA----AQGKRQFQQEVEVLSSIRHPNMVLLLG 291
+G+GG+ Y +D V + P + K + E+ + S+ +P++V G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 292 AC--PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
D+ +V E SL + L +R P + F + + +LH + +
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYF--MRQTIQGVQYLHNNR---V 147
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDLK N+ L+ + KI D GLA + GT YI PE
Sbjct: 148 IHRDLKLGNLFLNDDMDVKIGDFGLATKI------EFDGERKKDLCGTPNYIAPEVLCKK 201
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
+ + DI+S G +L ++ + P
Sbjct: 202 GHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 19/205 (9%)
Query: 237 IGEGGYGPVYR-GKLDHTPVAIKVLRPDA----AQGKRQFQQEVEVLSSIRHPNMVLLLG 291
+G+GG+ Y +D V + P + K + E+ + S+ +P++V G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 292 AC--PDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEPL 349
D+ +V E SL + L +R P + F + + +LH + +
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYF--MRQTIQGVQYLHNNR---V 163
Query: 350 VHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTG 409
+HRDLK N+ L+ + KI D GLA + GT YI PE
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKI------EFDGERKKXLCGTPNYIAPEVLCKK 217
Query: 410 MLTTKSDIYSFGIMLLQIITARSPM 434
+ + DI+S G +L ++ + P
Sbjct: 218 GHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 106/263 (40%), Gaps = 37/263 (14%)
Query: 217 RKYTIEEIEEATDKFSEAMKI-GEGGYGPV-YRGKLDHTPVAIKVLRPDAAQGKRQFQQE 274
R I E++ + KI G G G V ++G PVA+K + D E
Sbjct: 2 RIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA---LME 58
Query: 275 VEVLS-SIRHPNMV-LLLGACPDYGCLVYEYMHNGSLEDRLLRRG----NTPVIPWRKRF 328
+++L+ S HPN++ D + + N +L+D + + N +
Sbjct: 59 IKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPI 118
Query: 329 KIAAEIATALLFLHQAKPEPLVHRDLKPANILLD-------------RNYVSKISDVGLA 375
+ +IA+ + LH K ++HRDLKP NIL+ N ISD GL
Sbjct: 119 SLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 376 RLVPPSVADSVTQYHMTSAAGTFCYIDPE-------YQQTGMLTTKSDIYSFGIMLLQII 428
+ + S + ++ + +GT + PE Q LT DI+S G + I+
Sbjct: 176 KKL--DSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233
Query: 429 T-ARSPMGLTHHVSRAIEKGTLA 450
+ + P G + I +G +
Sbjct: 234 SKGKHPFGDKYSRESNIIRGIFS 256
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 40/217 (18%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
+++ IG G +G VY+ KL + VAIK Q KR +E++++ + H N+V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 111
Query: 289 LL------GACPD--YGCLVYEYMHNGSLEDRLLR-----RGNTPVIPWRKRFKIAAEIA 335
L G D Y LV +Y+ R+ R + PVI + K + ++
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVI-YVKLYMY--QLF 166
Query: 336 TALLFLHQAKPEPLVHRDLKPANILLDRNY-VSKISDVGLARLV---PPSVADSVTQYHM 391
+L ++H + HRD+KP N+LLD + V K+ D G A+ + P+V+ ++Y+
Sbjct: 167 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 223
Query: 392 TSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQII 428
A + +Y T+ D++S G +L +++
Sbjct: 224 ---APELIFGATDY------TSSIDVWSAGCVLAELL 251
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 49/238 (20%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR--- 269
+E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 270 ----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGN 318
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--- 133
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARL 377
++ A+ H ++HRD+K NIL+D N K+ D G L
Sbjct: 134 ----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 180
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 181 LKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 49/223 (21%)
Query: 237 IGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR-------------QFQQE 274
+G GG+G VY G D+ PVAIK + D G R F
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 275 VEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
+ +L P+ +L+ P+ +++++ G+L++ L R +
Sbjct: 76 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR-------------SFFWQ 122
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARLVPPSVADSVTQYHMT 392
+ A+ H ++HRD+K NIL+D N K+ D G L+ +V T
Sbjct: 123 VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--------YT 171
Query: 393 SAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 172 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 112/289 (38%), Gaps = 54/289 (18%)
Query: 230 KFSEAMKIGEGGYGPV---YRGKLDHTPVAIKVLRP--DAAQGKRQFQQEVEVLSSIRHP 284
++ IG G G V Y L+ K+ RP + KR ++ E+ ++ + H
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLMKCVNHK 83
Query: 285 NMVLLLGACPDYGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLF---- 340
N++ LL L E + + L+ VI + ++ E + LL+
Sbjct: 84 NIIGLLNVFTPQKSL--EEFQDVYIVMELMDANLCQVI----QMELDHERMSYLLYQMLC 137
Query: 341 ----LHQAKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAG 396
LH A ++HRDLKP+NI++ + KI D GLAR + T + M
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR-------TAGTSFMMEPEVV 187
Query: 397 TFCYIDPEYQQTGMLTTKSDIYSFGIMLLQIITARSPMGLTHHVSRAIEKGTLAEMLDPA 456
T Y PE D++S G ++ +++ + +L P
Sbjct: 188 TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK--------------------ILFPG 227
Query: 457 VTDWPAEAAESFSKLAIQCAELRKKDRPDLGTVIVPELNRLKDLGRKLE 505
D+ + + +L C E KK +P + T + NR K G E
Sbjct: 228 -RDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVE---NRPKYAGYSFE 272
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 33/256 (12%)
Query: 220 TIEEIEEATDKFSEAMKI-GEGGYGPV-YRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEV 277
I E++ + KI G G G V ++G PVA+K + D E+++
Sbjct: 23 NIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA---LMEIKL 79
Query: 278 LS-SIRHPNMV-LLLGACPDYGCLVYEYMHNGSLEDRLLRRG----NTPVIPWRKRFKIA 331
L+ S HPN++ D + + N +L+D + + N + +
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 139
Query: 332 AEIATALLFLHQAKPEPLVHRDLKPANILLD-------------RNYVSKISDVGLARLV 378
+IA+ + LH K ++HRDLKP NIL+ N ISD GL + +
Sbjct: 140 RQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 379 PPSVADSVTQYHMTSAAGTFCYIDPEYQQTGM---LTTKSDIYSFGIMLLQIIT-ARSPM 434
+ ++ + +GT + PE + LT DI+S G + I++ + P
Sbjct: 197 --DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 435 GLTHHVSRAIEKGTLA 450
G + I +G +
Sbjct: 255 GDKYSRESNIIRGIFS 270
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 104/256 (40%), Gaps = 33/256 (12%)
Query: 220 TIEEIEEATDKFSEAMKI-GEGGYGPV-YRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEV 277
I E++ + KI G G G V ++G PVA+K + D E+++
Sbjct: 23 NIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIA---LMEIKL 79
Query: 278 LS-SIRHPNMV-LLLGACPDYGCLVYEYMHNGSLEDRLLRRG----NTPVIPWRKRFKIA 331
L+ S HPN++ D + + N +L+D + + N + +
Sbjct: 80 LTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 139
Query: 332 AEIATALLFLHQAKPEPLVHRDLKPANILLD-------------RNYVSKISDVGLARLV 378
+IA+ + LH K ++HRDLKP NIL+ N ISD GL + +
Sbjct: 140 RQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL 196
Query: 379 PPSVADSVTQYHMTSAAGTFCYIDPEYQQTGM---LTTKSDIYSFGIMLLQIIT-ARSPM 434
+ ++ + +GT + PE + LT DI+S G + I++ + P
Sbjct: 197 --DSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF 254
Query: 435 GLTHHVSRAIEKGTLA 450
G + I +G +
Sbjct: 255 GDKYSRESNIIRGIFS 270
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 49/238 (20%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR--- 269
+E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 270 ----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGN 318
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--- 132
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARL 377
++ A+ H ++HRD+K NIL+D N K+ D G L
Sbjct: 133 ----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 179
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 180 LKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 49/238 (20%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR--- 269
+E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 270 ----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGN 318
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--- 133
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARL 377
++ A+ H ++HRD+K NIL+D N K+ D G L
Sbjct: 134 ----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 180
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 181 LKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 89/223 (39%), Gaps = 49/223 (21%)
Query: 237 IGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR-------------QFQQE 274
+G GG+G VY G D+ PVAIK + D G R F
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 275 VEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGNTPVIPWRKRFKIAAE 333
+ +L P+ +L+ P+ +++++ G+L++ L R +
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR-------------SFFWQ 121
Query: 334 IATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARLVPPSVADSVTQYHMT 392
+ A+ H ++HRD+K NIL+D N K+ D G L+ +V T
Sbjct: 122 VLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV--------YT 170
Query: 393 SAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 213
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 5/83 (6%)
Query: 351 HRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGM 410
HRD+KP NIL+ + + + D G+A + + +TQ + + GT Y PE
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASA---TTDEKLTQ--LGNTVGTLYYXAPERFSESH 211
Query: 411 LTTKSDIYSFGIMLLQIITARSP 433
T ++DIY+ +L + +T P
Sbjct: 212 ATYRADIYALTCVLYECLTGSPP 234
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 49/238 (20%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR--- 269
+E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 16 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 75
Query: 270 ----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGN 318
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--- 132
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARL 377
++ A+ H ++HRD+K NIL+D N K+ D G L
Sbjct: 133 ----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 179
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 180 LKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 49/238 (20%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR--- 269
+E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 270 ----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGN 318
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--- 145
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARL 377
++ A+ H ++HRD+K NIL+D N K+ D G L
Sbjct: 146 ----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 192
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 193 LKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 49/238 (20%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR--- 269
+E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 36 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 95
Query: 270 ----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGN 318
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--- 152
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARL 377
++ A+ H ++HRD+K NIL+D N K+ D G L
Sbjct: 153 ----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 199
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 200 LKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 249
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 49/238 (20%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR--- 269
+E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 17 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 76
Query: 270 ----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGN 318
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--- 133
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARL 377
++ A+ H ++HRD+K NIL+D N K+ D G L
Sbjct: 134 ----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 180
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 181 LKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 49/238 (20%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR--- 269
+E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 44 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 103
Query: 270 ----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGN 318
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--- 160
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARL 377
++ A+ H ++HRD+K NIL+D N K+ D G L
Sbjct: 161 ----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 207
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 208 LKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 49/238 (20%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR--- 269
+E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 270 ----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGN 318
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--- 145
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARL 377
++ A+ H ++HRD+K NIL+D N K+ D G L
Sbjct: 146 ----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 192
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 193 LKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLL 290
F++ +I + V+ GK+ P ++ +L+P + + E+ + S+ H ++V
Sbjct: 52 FAKCFEISDADTKEVFAGKI--VPKSL-LLKP---HQREKMSMEISIHRSLAHQHVVGFH 105
Query: 291 GACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
G D + +V E SL + L +R P + + +I +LH+ +
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY--LRQIVLGCQYLHRNR--- 159
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
++HRDLK N+ L+ + KI D GLA V GT YI PE
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV------EYDGERKKVLCGTPNYIAPEVLSK 213
Query: 409 GMLTTKSDIYSFGIMLLQIITARSPM 434
+ + D++S G ++ ++ + P
Sbjct: 214 KGHSFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 49/238 (20%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR--- 269
+E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 270 ----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGN 318
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--- 146
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARL 377
++ A+ H ++HRD+K NIL+D N K+ D G L
Sbjct: 147 ----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 193
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 194 LKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLL 290
F++ +I + V+ GK+ P ++ +L+P + + E+ + S+ H ++V
Sbjct: 54 FAKCFEISDADTKEVFAGKI--VPKSL-LLKP---HQREKMSMEISIHRSLAHQHVVGFH 107
Query: 291 GACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
G D + +V E SL + L +R P + + +I +LH+ +
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY--LRQIVLGCQYLHRNR--- 161
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
++HRDLK N+ L+ + KI D GLA V GT YI PE
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV------EYDGERKKVLCGTPNYIAPEVLSK 215
Query: 409 GMLTTKSDIYSFGIMLLQIITARSPM 434
+ + D++S G ++ ++ + P
Sbjct: 216 KGHSFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 49/238 (20%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR--- 269
+E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 270 ----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGN 318
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--- 146
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARL 377
++ A+ H ++HRD+K NIL+D N K+ D G L
Sbjct: 147 ----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 193
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 194 LKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 49/238 (20%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR--- 269
+E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 30 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 89
Query: 270 ----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGN 318
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--- 146
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARL 377
++ A+ H ++HRD+K NIL+D N K+ D G L
Sbjct: 147 ----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 193
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 194 LKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 20/206 (9%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTPVAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVLLL 290
F++ +I + V+ GK+ P ++ +L+P + + E+ + S+ H ++V
Sbjct: 28 FAKCFEISDADTKEVFAGKI--VPKSL-LLKP---HQREKMSMEISIHRSLAHQHVVGFH 81
Query: 291 GACPD--YGCLVYEYMHNGSLEDRLLRRGNTPVIPWRKRFKIAAEIATALLFLHQAKPEP 348
G D + +V E SL + L +R P + + +I +LH+ +
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY--LRQIVLGCQYLHRNR--- 135
Query: 349 LVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADSVTQYHMTSAAGTFCYIDPEYQQT 408
++HRDLK N+ L+ + KI D GLA V GT YI PE
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV------EYDGERKKVLCGTPNYIAPEVLSK 189
Query: 409 GMLTTKSDIYSFGIMLLQIITARSPM 434
+ + D++S G ++ ++ + P
Sbjct: 190 KGHSFEVDVWSIGCIMYTLLVGKPPF 215
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 49/238 (20%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR--- 269
+E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 49 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 108
Query: 270 ----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGN 318
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--- 165
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARL 377
++ A+ H ++HRD+K NIL+D N K+ D G L
Sbjct: 166 ----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 212
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 213 LKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 262
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 94/238 (39%), Gaps = 49/238 (20%)
Query: 222 EEIEEATDKFSEAMKIGEGGYGPVYRG--KLDHTPVAIKVLRPD-------AAQGKR--- 269
+E E ++ +G GG+G VY G D+ PVAIK + D G R
Sbjct: 29 KEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPM 88
Query: 270 ----------QFQQEVEVLSSIRHPNMVLLLGACPDYGCLVYEYM-HNGSLEDRLLRRGN 318
F + +L P+ +L+ P+ +++++ G+L++ L R
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELAR--- 145
Query: 319 TPVIPWRKRFKIAAEIATALLFLHQAKPEPLVHRDLKPANILLDRNYVS-KISDVGLARL 377
++ A+ H ++HRD+K NIL+D N K+ D G L
Sbjct: 146 ----------SFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGAL 192
Query: 378 VPPSVADSVTQYHMTSAAGTFCYIDPEYQQTGMLTTKS-DIYSFGIMLLQIITARSPM 434
+ +V T GT Y PE+ + +S ++S GI+L ++ P
Sbjct: 193 LKDTV--------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 40/217 (18%)
Query: 231 FSEAMKIGEGGYGPVYRGKLDHTP--VAIKVLRPDAAQGKRQFQQEVEVLSSIRHPNMVL 288
+++ IG G +G VY+ KL + VAIK Q KR +E++++ + H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK----KVLQDKRFKNRELQIMRKLDHCNIVR 89
Query: 289 LL------GACPD--YGCLVYEYMHNGSLEDRLLR-----RGNTPVIPWRKRFKIAAEIA 335
L G D Y LV +Y+ R+ R + PVI + K + ++
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVY--RVARHYSRAKQTLPVI-YVKLY--MYQLF 144
Query: 336 TALLFLHQAKPEPLVHRDLKPANILLDRNY-VSKISDVGLARLV---PPSVADSVTQYHM 391
+L ++H + HRD+KP N+LLD + V K+ D G A+ + P+V+ ++Y+
Sbjct: 145 RSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 201
Query: 392 TSAAGTFCYIDPEYQQTGMLTTKSDIYSFGIMLLQII 428
A + +Y T+ D++S G +L +++
Sbjct: 202 ---APELIFGATDY------TSSIDVWSAGCVLAELL 229
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.131 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,201,132
Number of Sequences: 62578
Number of extensions: 471929
Number of successful extensions: 3518
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 814
Number of HSP's successfully gapped in prelim test: 281
Number of HSP's that attempted gapping in prelim test: 1272
Number of HSP's gapped (non-prelim): 1142
length of query: 568
length of database: 14,973,337
effective HSP length: 104
effective length of query: 464
effective length of database: 8,465,225
effective search space: 3927864400
effective search space used: 3927864400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)