Query 008366
Match_columns 568
No_of_seqs 180 out of 1720
Neff 8.7
Searched_HMMs 29240
Date Tue Mar 26 00:31:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008366.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/008366hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1aoz_A Ascorbate oxidase; oxid 100.0 6.6E-96 2E-100 798.9 54.4 509 23-568 1-538 (552)
2 3sqr_A Laccase; multicopper ox 100.0 4.8E-93 1.6E-97 769.6 54.1 464 22-550 64-544 (580)
3 3pxl_A Laccase; 4-copper prote 100.0 7.3E-91 2.5E-95 744.5 49.0 457 25-549 3-470 (499)
4 1v10_A Laccase; multicopper bl 100.0 3.5E-91 1.2E-95 755.3 47.0 476 22-568 20-508 (521)
5 3t6v_A Laccase; beta barrel, o 100.0 2E-89 6.8E-94 733.5 54.8 456 26-549 5-470 (495)
6 1zpu_A Iron transport multicop 100.0 8.5E-90 2.9E-94 745.2 47.9 463 24-550 1-481 (534)
7 2q9o_A Laccase-1; multicopper 100.0 3.1E-87 1E-91 729.7 55.7 469 22-550 30-521 (559)
8 1hfu_A Laccase 1; oxidoreducta 100.0 2.4E-87 8.3E-92 722.9 44.4 471 27-568 6-487 (503)
9 2xu9_A Laccase; oxidoreductase 100.0 9.6E-81 3.3E-85 661.4 40.0 409 22-549 13-439 (439)
10 2uxt_A Protein SUFI, SUFI; oxi 100.0 4.1E-79 1.4E-83 649.6 34.2 408 25-552 18-443 (451)
11 3abg_A Bilirubin oxidase; clea 100.0 1.1E-76 3.6E-81 641.4 39.9 423 23-552 34-477 (534)
12 3zx1_A Oxidoreductase, putativ 100.0 4.7E-76 1.6E-80 625.8 41.4 420 21-549 46-480 (481)
13 2wsd_A Spore coat protein A; o 100.0 6.2E-76 2.1E-80 635.4 42.4 429 25-550 25-510 (513)
14 3aw5_A Multicopper oxidase; be 100.0 6.9E-76 2.4E-80 623.7 31.0 390 47-549 28-448 (448)
15 3gyr_A PHS, phenoxazinone synt 100.0 1.9E-74 6.6E-79 641.3 38.4 470 23-553 30-594 (612)
16 3od3_A Blue copper oxidase CUE 100.0 3.9E-74 1.3E-78 610.7 36.0 429 24-548 16-488 (488)
17 2g23_A PHS, phenoxazinone synt 100.0 7.4E-72 2.5E-76 607.6 42.4 443 23-551 30-592 (612)
18 3g5w_A Multicopper oxidase typ 100.0 8.6E-53 3E-57 426.8 31.2 272 24-312 1-278 (318)
19 2j5w_A Ceruloplasmin, ferroxid 100.0 3.1E-52 1.1E-56 483.6 36.1 268 22-313 18-359 (1065)
20 2zwn_A Two-domain type laccase 100.0 3.9E-51 1.3E-55 419.3 33.8 272 24-312 2-279 (339)
21 2r7e_A Coagulation factor VIII 100.0 4.2E-53 1.4E-57 472.1 14.9 230 41-292 63-319 (742)
22 2dv6_A Nitrite reductase; elec 100.0 3.8E-49 1.3E-53 421.2 25.3 410 22-563 25-445 (447)
23 3gdc_A Multicopper oxidase; be 100.0 1.2E-47 4E-52 384.6 29.0 241 22-292 31-278 (288)
24 1kbv_A ANIA, major outer membr 100.0 8.3E-47 2.8E-51 385.2 28.5 268 21-313 34-310 (327)
25 2j5w_A Ceruloplasmin, ferroxid 100.0 5.3E-46 1.8E-50 431.4 18.5 400 41-552 615-1060(1065)
26 3kw8_A Laccase, putative coppe 100.0 4.6E-44 1.6E-48 356.3 25.4 238 22-311 4-266 (276)
27 3t9w_A Small laccase, multi-co 100.0 4E-44 1.4E-48 360.1 23.6 243 18-311 22-288 (299)
28 3tas_A Small laccase, multi-co 100.0 3.4E-44 1.1E-48 363.5 23.3 243 19-313 7-274 (313)
29 2zoo_A Probable nitrite reduct 100.0 5.3E-43 1.8E-47 372.9 28.4 268 21-313 24-300 (442)
30 1mzy_A Copper-containing nitri 100.0 5.4E-43 1.8E-47 358.8 26.0 272 19-313 26-321 (333)
31 1oe1_A Dissimilatory copper-co 100.0 7.3E-42 2.5E-46 350.9 24.8 267 21-313 28-321 (336)
32 2bw4_A Copper-containing nitri 100.0 4.4E-42 1.5E-46 353.1 22.9 270 20-313 33-327 (340)
33 3cg8_A Laccase; oxidoreductase 100.0 4.6E-40 1.6E-44 336.7 24.6 237 22-311 45-307 (343)
34 2dv6_A Nitrite reductase; elec 100.0 3.4E-38 1.2E-42 336.6 31.9 265 23-313 161-436 (447)
35 1sdd_B Coagulation factor V; c 100.0 5.3E-39 1.8E-43 357.1 21.2 235 50-309 63-326 (647)
36 1sdd_A Coagulation factor V; c 100.0 2.5E-40 8.6E-45 334.2 7.1 219 44-292 49-290 (306)
37 2r7e_B Coagulation factor VIII 100.0 3.9E-39 1.3E-43 360.0 9.1 255 22-291 130-445 (770)
38 2r7e_A Coagulation factor VIII 100.0 3.1E-36 1.1E-40 336.2 3.3 222 52-292 448-701 (742)
39 3gdc_A Multicopper oxidase; be 100.0 4.1E-30 1.4E-34 257.2 16.3 235 188-550 54-288 (288)
40 3cg8_A Laccase; oxidoreductase 100.0 9.2E-29 3.2E-33 252.9 17.2 219 207-552 75-308 (343)
41 3g5w_A Multicopper oxidase typ 100.0 2.2E-28 7.4E-33 247.7 17.2 248 189-552 23-278 (318)
42 3kw8_A Laccase, putative coppe 100.0 7.4E-28 2.5E-32 239.3 17.0 220 207-553 34-268 (276)
43 3t9w_A Small laccase, multi-co 100.0 5.1E-28 1.7E-32 242.9 15.8 219 207-552 56-289 (299)
44 2zwn_A Two-domain type laccase 100.0 1.2E-27 4.3E-32 244.8 18.8 246 188-552 23-279 (339)
45 3tas_A Small laccase, multi-co 99.9 2.2E-27 7.5E-32 240.1 17.7 220 207-553 40-274 (313)
46 1sdd_A Coagulation factor V; c 99.9 1E-24 3.5E-29 219.9 3.8 237 191-551 52-301 (306)
47 1sdd_B Coagulation factor V; c 99.9 2E-22 7E-27 223.7 16.1 238 207-550 67-327 (647)
48 1kbv_A ANIA, major outer membr 99.9 2.5E-21 8.4E-26 197.1 19.8 251 188-553 58-310 (327)
49 2bw4_A Copper-containing nitri 99.9 7.1E-21 2.4E-25 195.1 21.8 94 444-553 231-327 (340)
50 1mzy_A Copper-containing nitri 99.8 1.6E-19 5.4E-24 184.5 22.5 95 444-553 225-321 (333)
51 2r7e_B Coagulation factor VIII 99.8 6.5E-22 2.2E-26 221.1 3.2 88 444-549 368-455 (770)
52 2xu9_A Laccase; oxidoreductase 99.8 1.1E-18 3.9E-23 184.7 20.1 229 41-292 174-430 (439)
53 2zoo_A Probable nitrite reduct 99.8 8.7E-19 3E-23 186.1 18.3 242 188-553 48-300 (442)
54 1oe1_A Dissimilatory copper-co 99.8 6E-18 2E-22 173.1 23.3 264 188-553 53-321 (336)
55 2uxt_A Protein SUFI, SUFI; oxi 99.8 5.6E-18 1.9E-22 179.6 23.4 251 26-310 153-441 (451)
56 1v10_A Laccase; multicopper bl 99.7 1.9E-16 6.7E-21 170.8 23.4 241 44-292 191-481 (521)
57 1hfu_A Laccase 1; oxidoreducta 99.7 1.9E-16 6.5E-21 170.3 22.0 262 27-292 143-460 (503)
58 3zx1_A Oxidoreductase, putativ 99.7 2.1E-16 7.1E-21 167.8 20.5 234 41-292 208-471 (481)
59 3t6v_A Laccase; beta barrel, o 99.7 1.7E-15 5.7E-20 161.9 21.1 245 43-291 167-460 (495)
60 1zpu_A Iron transport multicop 99.7 6.2E-15 2.1E-19 159.3 23.7 245 43-292 166-471 (534)
61 3pxl_A Laccase; 4-copper prote 99.7 5E-15 1.7E-19 158.2 21.8 242 43-291 165-460 (499)
62 3od3_A Blue copper oxidase CUE 99.6 3E-15 1E-19 158.8 18.4 254 27-291 152-479 (488)
63 2g23_A PHS, phenoxazinone synt 99.6 1.3E-14 4.5E-19 157.9 22.1 240 42-292 252-581 (612)
64 1aoz_A Ascorbate oxidase; oxid 99.6 8.6E-15 2.9E-19 159.3 20.2 229 57-292 205-515 (552)
65 3aw5_A Multicopper oxidase; be 99.6 5.5E-15 1.9E-19 156.4 17.0 218 41-292 166-439 (448)
66 2q9o_A Laccase-1; multicopper 99.6 9.3E-14 3.2E-18 151.1 25.8 247 43-292 194-511 (559)
67 2wsd_A Spore coat protein A; o 99.6 5E-15 1.7E-19 159.6 13.6 224 42-292 228-500 (513)
68 3abg_A Bilirubin oxidase; clea 99.5 9.6E-14 3.3E-18 149.8 15.9 242 43-310 200-475 (534)
69 3cvb_A Plastocyanin; cupredoxi 99.5 1.2E-14 4E-19 122.2 4.8 90 51-144 14-105 (105)
70 3sqr_A Laccase; multicopper ox 99.5 4E-12 1.4E-16 137.5 24.6 241 44-291 225-533 (580)
71 3gyr_A PHS, phenoxazinone synt 99.4 7.9E-12 2.7E-16 138.2 22.0 241 41-292 251-581 (612)
72 1iby_A Nitrosocyanin; RED copp 99.4 1.5E-12 5.3E-17 110.5 11.1 92 39-144 20-112 (112)
73 2cal_A Rusticyanin; iron respi 99.3 7.6E-12 2.6E-16 112.1 10.2 99 40-143 46-154 (154)
74 1fwx_A Nitrous oxide reductase 99.2 2.8E-11 9.7E-16 129.8 11.3 96 40-146 497-594 (595)
75 2aan_A Auracyanin A; cupredoxi 99.1 5.9E-11 2E-15 104.8 7.1 95 444-549 35-139 (139)
76 2ov0_A Amicyanin; beta-sandwic 99.1 2.8E-10 9.6E-15 95.2 9.7 79 50-143 27-105 (105)
77 3cvb_A Plastocyanin; cupredoxi 99.1 1.2E-10 4.1E-15 97.5 6.1 86 444-550 19-105 (105)
78 2gim_A Plastocyanin; beta shee 98.9 2.5E-09 8.4E-14 89.6 8.7 83 56-144 20-106 (106)
79 2aan_A Auracyanin A; cupredoxi 98.9 3.9E-09 1.3E-13 93.1 9.5 87 56-143 35-139 (139)
80 4hci_A Cupredoxin 1; structura 98.7 3.3E-08 1.1E-12 81.7 9.3 79 50-143 22-100 (100)
81 2gim_A Plastocyanin; beta shee 98.7 2.3E-08 7.9E-13 83.6 8.1 85 444-549 20-105 (106)
82 1qhq_A Protein (auracyanin); e 98.7 6.4E-08 2.2E-12 85.3 10.1 88 56-144 33-140 (140)
83 2plt_A Plastocyanin; electron 98.6 1.1E-07 3.9E-12 78.0 9.5 77 56-143 18-98 (98)
84 1qhq_A Protein (auracyanin); e 98.6 1.1E-07 3.6E-12 83.9 9.2 99 444-549 33-139 (140)
85 3c75_A Amicyanin; copper prote 98.6 1E-07 3.4E-12 82.9 8.6 79 50-143 54-132 (132)
86 2plt_A Plastocyanin; electron 98.6 1.2E-07 4.1E-12 77.9 7.4 81 444-549 18-98 (98)
87 1pcs_A Plastocyanin; electron 98.6 6.2E-08 2.1E-12 79.7 5.6 79 444-549 19-98 (98)
88 1bxv_A Plastocyanin; copper pr 98.6 2.4E-07 8.3E-12 74.9 8.8 73 444-549 19-91 (91)
89 1pcs_A Plastocyanin; electron 98.5 2.6E-07 8.7E-12 75.9 8.2 80 56-143 19-98 (98)
90 1bxv_A Plastocyanin; copper pr 98.5 3.3E-07 1.1E-11 74.1 8.5 73 56-143 19-91 (91)
91 1b3i_A PETE protein, protein ( 98.5 5.1E-07 1.7E-11 74.0 8.8 77 56-143 19-97 (97)
92 1byp_A Protein (plastocyanin); 98.4 7.3E-07 2.5E-11 73.3 9.1 77 56-143 17-99 (99)
93 1plc_A Plastocyanin; electron 98.4 7.3E-07 2.5E-11 73.3 9.0 77 56-143 17-99 (99)
94 1kdj_A Plastocyanin; electron 98.4 6.3E-07 2.2E-11 74.1 8.2 82 56-143 17-102 (102)
95 1b3i_A PETE protein, protein ( 98.4 4.9E-07 1.7E-11 74.1 7.2 79 444-549 19-97 (97)
96 3tu6_A Pseudoazurin (blue copp 98.4 6.1E-07 2.1E-11 77.0 7.8 76 56-146 23-98 (127)
97 1iby_A Nitrosocyanin; RED copp 98.4 1.5E-06 5.1E-11 73.2 10.0 75 444-550 38-112 (112)
98 4hci_A Cupredoxin 1; structura 98.4 1.3E-06 4.6E-11 71.9 9.3 73 444-549 28-100 (100)
99 3erx_A Pseudoazurin; copper pr 98.4 1.1E-06 3.6E-11 75.1 8.7 75 56-145 21-95 (123)
100 1cuo_A Protein (azurin ISO-2); 98.4 2.2E-06 7.7E-11 73.8 10.5 89 56-144 18-129 (129)
101 1byp_A Protein (plastocyanin); 98.3 7.3E-07 2.5E-11 73.3 6.7 83 444-549 17-99 (99)
102 3ef4_A Pseudoazurin, blue copp 98.3 2.3E-06 7.9E-11 72.9 9.6 75 56-145 22-96 (124)
103 3ay2_A Lipid modified azurin p 98.3 3.8E-06 1.3E-10 75.3 10.3 88 56-144 58-167 (167)
104 1iuz_A Plastocyanin; electron 98.2 6.5E-06 2.2E-10 67.5 9.0 77 56-143 18-98 (98)
105 1kdj_A Plastocyanin; electron 98.2 2.8E-06 9.7E-11 70.1 6.8 85 444-549 17-102 (102)
106 1id2_A Amicyanin; beta barrel, 98.1 9.3E-06 3.2E-10 67.6 9.4 73 56-143 34-106 (106)
107 2ccw_A Azurin II, AZN-2; elect 98.1 1E-05 3.6E-10 69.5 9.8 87 56-143 18-128 (129)
108 1paz_A Pseudoazurin precursor; 98.1 9.3E-06 3.2E-10 69.4 8.8 75 56-145 21-95 (123)
109 2iaa_C Azurin; quinoprotein, t 98.1 1.3E-05 4.3E-10 68.9 9.7 87 56-143 17-127 (128)
110 1nwp_A Azurin; electron transp 98.1 1.8E-05 6.3E-10 67.9 9.8 87 56-143 18-128 (128)
111 1pmy_A Pseudoazurin; electron 98.1 1E-05 3.5E-10 69.1 8.0 75 56-145 21-95 (123)
112 1plc_A Plastocyanin; electron 98.0 1.1E-05 3.8E-10 66.1 7.0 83 444-549 17-99 (99)
113 3sbq_A Nitrous-oxide reductase 97.9 3.7E-05 1.3E-09 81.0 11.0 89 43-145 545-638 (638)
114 1fwx_A Nitrous oxide reductase 97.9 4.5E-05 1.5E-09 82.0 11.3 77 444-550 513-592 (595)
115 2ux6_A Pseudoazurin; type-1 co 97.9 2.9E-05 1E-09 66.1 7.9 73 56-145 21-93 (122)
116 2cal_A Rusticyanin; iron respi 97.9 8E-05 2.7E-09 66.2 10.9 89 444-549 61-154 (154)
117 2ov0_A Amicyanin; beta-sandwic 97.8 6.3E-05 2.1E-09 62.3 8.7 73 444-549 33-105 (105)
118 3fsa_A Azurin; copper, cupredo 97.5 0.00076 2.6E-08 57.0 10.2 85 56-143 18-125 (125)
119 1iuz_A Plastocyanin; electron 97.3 0.00097 3.3E-08 54.2 8.3 81 444-549 18-98 (98)
120 3ef4_A Pseudoazurin, blue copp 97.2 0.00077 2.6E-08 57.2 7.6 76 444-552 22-97 (124)
121 3tu6_A Pseudoazurin (blue copp 97.2 0.00067 2.3E-08 58.0 6.9 76 444-552 23-98 (127)
122 3erx_A Pseudoazurin; copper pr 97.2 0.0011 3.9E-08 56.2 8.2 75 444-551 21-95 (123)
123 1id2_A Amicyanin; beta barrel, 96.9 0.0033 1.1E-07 51.8 8.7 73 444-549 34-106 (106)
124 3c75_A Amicyanin; copper prote 96.7 0.0065 2.2E-07 52.3 9.1 73 444-549 60-132 (132)
125 1paz_A Pseudoazurin precursor; 96.7 0.0049 1.7E-07 52.3 8.1 75 444-551 21-95 (123)
126 2cua_A Protein (CUA); CUA cent 96.5 0.01 3.5E-07 51.1 9.1 74 56-144 60-135 (135)
127 1pmy_A Pseudoazurin; electron 96.5 0.0063 2.2E-07 51.6 7.5 38 510-551 58-95 (123)
128 3s8f_B Cytochrome C oxidase su 96.3 0.019 6.6E-07 51.2 9.4 74 56-144 93-168 (168)
129 3sbq_A Nitrous-oxide reductase 96.2 0.027 9.2E-07 59.5 11.5 79 444-550 558-637 (638)
130 1cuo_A Protein (azurin ISO-2); 95.7 0.074 2.5E-06 45.3 10.4 97 444-550 18-129 (129)
131 3ay2_A Lipid modified azurin p 95.7 0.037 1.3E-06 49.3 8.5 97 444-550 58-167 (167)
132 2cua_A Protein (CUA); CUA cent 95.5 0.069 2.4E-06 45.9 9.3 71 445-549 61-134 (135)
133 2ux6_A Pseudoazurin; type-1 co 95.4 0.045 1.5E-06 46.2 7.8 73 444-551 21-93 (122)
134 2ccw_A Azurin II, AZN-2; elect 94.5 0.21 7.3E-06 42.4 9.5 96 444-549 18-128 (129)
135 2iaa_C Azurin; quinoprotein, t 94.3 0.25 8.6E-06 41.9 9.5 96 444-549 17-127 (128)
136 1nwp_A Azurin; electron transp 94.0 0.3 1E-05 41.4 9.3 96 444-549 18-128 (128)
137 3fsa_A Azurin; copper, cupredo 93.8 0.36 1.2E-05 40.5 9.3 93 444-549 18-125 (125)
138 3s8f_B Cytochrome C oxidase su 92.4 0.72 2.5E-05 40.9 9.6 74 445-550 94-168 (168)
139 3isy_A Bsupi, intracellular pr 81.1 4.2 0.00014 33.7 6.9 28 100-127 70-99 (120)
140 3isy_A Bsupi, intracellular pr 80.7 11 0.00038 31.2 9.3 70 219-289 22-104 (120)
141 1cyx_A CYOA; electron transpor 72.5 12 0.00042 34.0 8.0 62 209-289 41-102 (205)
142 1cyx_A CYOA; electron transpor 68.4 14 0.00047 33.7 7.4 73 56-143 41-115 (205)
143 2f1e_A Protein APAG; APAG prot 61.2 25 0.00084 29.4 7.1 72 25-116 6-88 (127)
144 2gsm_B Cytochrome C oxidase su 55.6 25 0.00087 33.3 7.1 61 209-288 171-231 (262)
145 2x3c_A Toxic extracellular end 55.4 21 0.00071 35.4 6.7 15 102-116 95-109 (343)
146 2gsm_B Cytochrome C oxidase su 54.0 37 0.0013 32.2 8.0 75 56-145 171-247 (262)
147 3hb3_B Cytochrome C oxidase su 52.7 41 0.0014 32.5 8.1 76 56-146 189-266 (298)
148 1yew_A Particulate methane mon 52.5 16 0.00053 36.1 5.0 69 42-116 250-334 (382)
149 3hb3_B Cytochrome C oxidase su 42.7 1E+02 0.0036 29.6 9.2 77 442-550 187-264 (298)
150 4ubp_B Protein (urease (chain 41.6 39 0.0013 27.8 5.0 72 49-122 4-93 (126)
151 4ac7_B Urease subunit beta; hy 41.6 39 0.0013 27.8 5.0 72 49-122 4-93 (126)
152 1v54_B Cytochrome C oxidase po 41.4 47 0.0016 30.7 6.4 61 209-288 140-200 (227)
153 2c34_A ICP, inhibitor of cyste 38.9 1.3E+02 0.0044 24.4 8.0 68 55-123 14-89 (116)
154 1xvs_A Protein APAG; MCSG APC2 37.9 31 0.001 28.8 4.0 72 25-116 5-87 (126)
155 1fft_B Ubiquinol oxidase; elec 37.5 38 0.0013 33.0 5.3 61 209-288 151-211 (315)
156 2p9r_A Alpha-2-M, alpha-2-macr 36.5 1.1E+02 0.0036 23.8 7.1 69 212-286 12-84 (102)
157 1v54_B Cytochrome C oxidase po 36.0 57 0.002 30.1 6.0 75 56-145 140-216 (227)
158 2r39_A FIXG-related protein; s 34.8 80 0.0027 25.6 6.2 46 218-273 34-81 (118)
159 2cio_B Inhibitor of cysteine p 33.9 1.5E+02 0.0052 24.2 7.7 66 55-123 12-93 (121)
160 2xzz_A Protein-glutamine gamma 33.0 69 0.0024 25.4 5.3 53 65-123 23-79 (102)
161 2h7w_A Chagasin; beta-strands, 32.7 1.5E+02 0.005 24.7 7.5 65 55-123 32-104 (131)
162 1xq4_A Protein APAG; all beta 32.3 45 0.0015 28.3 4.2 71 26-116 11-92 (139)
163 1tza_A APAG protein, SOR45; st 30.0 40 0.0014 28.4 3.5 47 67-116 33-87 (134)
164 1nep_A EPV20, BNPC2, epididyma 29.6 1E+02 0.0034 25.5 6.0 62 56-117 26-95 (130)
165 2wtp_A ORF131 protein, CZCE; m 28.6 21 0.00071 29.8 1.4 23 210-232 72-94 (131)
166 1x9u_A Umecyanin; cupredoxin, 26.8 70 0.0024 26.1 4.4 33 519-551 73-106 (116)
167 2f1e_A Protein APAG; APAG prot 26.1 50 0.0017 27.5 3.4 50 218-270 32-85 (127)
168 1xwv_A DER F II; beta sheets, 26.1 1.3E+02 0.0044 24.8 6.0 61 55-116 24-92 (129)
169 1xvs_A Protein APAG; MCSG APC2 26.0 43 0.0015 27.8 3.0 50 218-270 31-84 (126)
170 3rfr_A PMOB; membrane, oxidore 25.9 1.2E+02 0.0042 30.1 6.6 50 65-116 301-366 (419)
171 4ep8_B Urease subunit beta; al 23.4 1.7E+02 0.0057 23.1 5.6 59 57-115 12-82 (101)
172 3q48_A Chaperone CUPB2; IG fol 23.3 1.2E+02 0.004 28.6 5.8 44 27-73 45-102 (257)
173 1tza_A APAG protein, SOR45; st 23.3 49 0.0017 27.8 2.8 50 218-270 31-84 (134)
174 2qjv_A Uncharacterized IOLB-li 23.1 2.8E+02 0.0097 26.1 8.4 62 221-287 51-112 (270)
175 1x9u_A Umecyanin; cupredoxin, 23.1 71 0.0024 26.0 3.7 79 57-147 27-108 (116)
176 3arc_L Photosystem II reaction 22.2 54 0.0019 20.4 2.0 15 5-19 20-34 (37)
177 2wgn_B Inhibitor of cysteine p 22.0 3.2E+02 0.011 22.6 7.7 74 49-123 28-105 (132)
178 1xq4_A Protein APAG; all beta 21.4 52 0.0018 27.9 2.6 50 218-270 36-89 (139)
179 2x3c_A Toxic extracellular end 21.3 2.6E+02 0.0089 27.4 8.2 69 217-286 38-127 (343)
180 1fft_B Ubiquinol oxidase; elec 20.6 82 0.0028 30.6 4.2 73 56-143 151-225 (315)
No 1
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=100.00 E-value=6.6e-96 Score=798.91 Aligned_cols=509 Identities=29% Similarity=0.550 Sum_probs=404.4
Q ss_pred CceEEEEEEEEEEeeccCceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CCeeEEEccccccCCCCCCCCCCccc
Q 008366 23 AAVVEHSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP-YNITIHWHGIFQIRSIWADGPNMITQ 101 (568)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~~~ 101 (568)
+++++|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|.|+ ++++|||||+++...+|+||+++++|
T Consensus 1 ~~~~~y~~~v~~~~~~~dg~~~~~~~~Ng~~PGP~I~~~~GD~v~v~v~N~l~~~~tsiHwHGl~~~~~~~~DGv~~vtq 80 (552)
T 1aoz_A 1 SQIRHYKWEVEYMFWAPNCNENIVMGINGQFPGPTIRANAGDSVVVELTNKLHTEGVVIHWHGILQRGTPWADGTASISQ 80 (552)
T ss_dssp CCEEEEEEEEEEEEECTTSSCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred CeEEEEEEEEEEEEEcCCCceEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCCCeeEEeCCCccCCCcccCCCccccc
Confidence 36899999999999999999999999999999999999999999999999998 99999999999999999999999999
Q ss_pred ccCCCCCeEEEEEEeCCCCCceeEecChhhhhh-cceEEEEEecCCCCCCCCCCCCCceeEEEeecccCcHHHHHhhccc
Q 008366 102 CPIRPGNSYTYKFRIINQEGTLWWHAHISMLRA-TVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEI 180 (568)
Q Consensus 102 ~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 180 (568)
|+|+||++++|+|++ +++||||||||...+.. ||+|+|||++++....++ .+|+|++|+++||++.....+......
T Consensus 81 ~~I~PG~s~tY~f~~-~~~GT~wYHsH~~~q~~~Gl~G~liV~~~~~~~~~~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 158 (552)
T 1aoz_A 81 CAINPGETFFYNFTV-DNPGTFFYHGHLGMQRSAGLYGSLIVDPPQGKKEPF-HYDGEINLLLSDWWHQSIHKQEVGLSS 158 (552)
T ss_dssp CCBCTTCEEEEEEEC-CSCEEEEEEECSTTTGGGTCEEEEEEECCTTCCCSS-CCSEEEEEEEEEECSSCHHHHHHHTTS
T ss_pred CCcCCCCeEEEEEEC-CCCEEEEEEECchhHHhccCeeeEEEeCCcccCCCC-CCCccceEEeecccCCCHHHHHhhhhc
Confidence 999999999999999 99999999999988776 999999999986554455 456899999999999887666543322
Q ss_pred cC-CCCCCCceEEEcCCCCCCCCC-------------CCC-----ceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCcee
Q 008366 181 TG-VGPRISDAFTINGMPGDLYPC-------------SEN-----QTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKF 241 (568)
Q Consensus 181 ~g-~~~~~~~~~~iNG~~g~~~~~-------------~~~-----~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 241 (568)
.. .....++.++|||+. .++| +.. ..+.+++++|++|||||||++....+.|+|+||+|
T Consensus 159 ~~~~~~~~~~~~liNG~~--~~~c~~~~~~~~~~~~c~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~ 236 (552)
T 1aoz_A 159 KPIRWIGEPQTILLNGRG--QFDCSIAAKYDSNLEPCKLKGSESCAPYIFHVSPKKTYRIRIASTTALAALNFAIGNHQL 236 (552)
T ss_dssp SSCCCCCSCSEEEETTBC--CSSSBTTGGGCTTSCBCCCCSCSTTSCCCEEECTTCEEEEEEEECCSSCEEEEEETTCCE
T ss_pred ccccCCCCCCeEEECCcc--ccCcccCcccccccccccccCCCCCCceEEEEcCCCEEEEEEEcccccceEEEEEcCcEE
Confidence 11 111346799999994 2333 221 12389999999999999999999999999999999
Q ss_pred EEEEecCCCCCcEEEeEEEECCCceEEEEEEe-CCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCC-C-C-CC
Q 008366 242 TVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKA-DQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGAST-A-N-PI 317 (568)
Q Consensus 242 ~via~DG~~~~p~~~d~~~l~pg~r~dv~~~~-~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~-~-~-~~ 317 (568)
+|||.||.+++|+.++++.|.|||||||+|++ ++.+|+|+|+++...... ......|+|+|+++.. . + ..
T Consensus 237 ~vi~~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~~~~~------~~~~~~ail~y~~~~~~~~p~~~ 310 (552)
T 1aoz_A 237 LVVEADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTRARHP------NTPPGLTLLNYLPNSVSKLPTSP 310 (552)
T ss_dssp EEEEETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEESSCC------CSCCEEEEEEETTSCTTSCCSSC
T ss_pred EEEEECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcccCCC------CCccEEEEEEECCCCCCCCCCCC
Confidence 99999999999999999999999999999999 456899999999875211 2246889999988653 1 1 12
Q ss_pred CCCCCCCCCCCccccccccCccCCCCCCCCCCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCch
Q 008366 318 MPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSL 397 (568)
Q Consensus 318 ~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~ 397 (568)
.|..+.+++......+ .++.+.... +...+..+++++.+.+.+... .....|++||.+|..|+ .
T Consensus 311 ~p~~p~~~~~~~~~~~--~l~~l~~~~-~~~~~~~~~~~~~l~~~~~~~------------~~~~~w~iNg~s~~~p~-~ 374 (552)
T 1aoz_A 311 PPQTPAWDDFDRSKNF--TYRITAAMG-SPKPPVKFNRRIFLLNTQNVI------------NGYVKWAINDVSLALPP-T 374 (552)
T ss_dssp CCCCCCTTCHHHHHHH--HTTCCBCTT-CCCCCSSCSEEEEEEEEEEEE------------TTEEEEEETTEEECCCS-S
T ss_pred CCCCCccccccccccc--cccccccCC-CCCCCCCCcEEEEEEEeeccC------------CCeEEEEECCCccCCCC-C
Confidence 2333333322111111 133332222 333456778888777654322 12468999999999886 7
Q ss_pred hhhhhhhhcCCCcccCCCCCCCC-cccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCC---CCCCceee
Q 008366 398 SILQAYFFNVGGVYEPNFPNQPP-VEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIA---VESHPMHL 473 (568)
Q Consensus 398 ~ll~~~~~~~~g~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~---~~~HP~Hl 473 (568)
|+|.+.+.++.|.+..+++..++ ..|+.+....+ ...+.++.++.++.|++|||+|+|.+.+. ...|||||
T Consensus 375 P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~t~~~~~~~g~~v~ivi~N~~~~~~~~~~~HP~HL 449 (552)
T 1aoz_A 375 PYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTN-----EKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHL 449 (552)
T ss_dssp CHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCC-----TTCEEECCCEEECTTCEEEEEEEECCCSSTTCCCCEEEEE
T ss_pred CHHHHHhhcCccccccCCCcccccccccccccccc-----ccccccceEEEecCCCEEEEEEeCCcccccccCCCCCEEE
Confidence 88888777777777666654332 12333211000 02345667889999999999999976432 46799999
Q ss_pred cCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecCCC
Q 008366 474 HGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVENGPT 553 (568)
Q Consensus 474 HG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 553 (568)
|||+|+||+++.|.|++ .+...+|+.+|+|||||.|+++||++|||+|||||.|+|||||++|++.|||++|.|...
T Consensus 450 HGh~F~Vl~~g~G~~~~-~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~~-- 526 (552)
T 1aoz_A 450 HGHDFWVLGYGDGKFSA-EEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVE-- 526 (552)
T ss_dssp TTCCEEEEEEEESSCCG-GGGGGSCCSSCCEESEEEECTTEEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECGG--
T ss_pred cCCceEEEecccCccCc-ccccccccCCCCccCeEEeCCCceEEEEEEcCCCeEEEEEeeehhHhhCCCeEEEEeCch--
Confidence 99999999999999987 455678899999999999999999999999999999999999999999999999987642
Q ss_pred CCCCCCCCCCCCCCC
Q 008366 554 PSTMLPPPPADLPQC 568 (568)
Q Consensus 554 ~~~~~~~~p~~~~~c 568 (568)
.++++|+++++|
T Consensus 527 ---~~~~~P~~~~~C 538 (552)
T 1aoz_A 527 ---KVGRIPTKALAC 538 (552)
T ss_dssp ---GCCCCCHHHHSS
T ss_pred ---hhccCCcchhhh
Confidence 467789999999
No 2
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=100.00 E-value=4.8e-93 Score=769.61 Aligned_cols=464 Identities=31% Similarity=0.514 Sum_probs=372.4
Q ss_pred CCceEEEEEEEEEEeeccCceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CCeeEEEccccccCCCCCCCCCCcc
Q 008366 22 SAAVVEHSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP-YNITIHWHGIFQIRSIWADGPNMIT 100 (568)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~~ 100 (568)
.+++++|+|++++..+++||+++.+|+|||++|||+|++++||+|+|+|+|+++ ++++|||||+++...+|+||+++++
T Consensus 64 ~~~~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~tsIHwHGl~~~~t~~~DGvp~vT 143 (580)
T 3sqr_A 64 TGVTREYWLSVENSTITPDGYTRSAMTFNGTVPGPAIIADWGDNLIIHVTNNLEHNGTSIHWHGIRQLGSLEYDGVPGVT 143 (580)
T ss_dssp CCCEEEEEEEEEEEEECSSSBCEEEEEETTBSSCCCEEEETTCEEEEEEEECCSSCCBCEEETTCCCTTCGGGSCCBTTT
T ss_pred CceEEEEEEEEEEEEecCCCeEEEEEEECCccCCceEEEeCCCEEEEEEEECCCCCcceEEecccccCCCccccCCCccc
Confidence 567899999999999999999999999999999999999999999999999998 8999999999999999999999999
Q ss_pred cccCCCCCeEEEEEEeCCCCCceeEecChhhhhh-cceEEEEEecCCCCCCCCCCCCCce-eEEEeecccCcHHHHHhhc
Q 008366 101 QCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRA-TVHGAFIIRPKSGHKYPFPKPDKEV-PIVLGEWWNDDIMDVANRG 178 (568)
Q Consensus 101 ~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~~~~~ 178 (568)
||+|+||++|+|+|++ +++||||||||...++. ||+|+|||+++... .+|.|. +|+++||++....++....
T Consensus 144 q~pI~PG~sftY~f~~-~q~GT~WYHsH~~~q~~~GL~G~lIV~~p~~~-----~yD~d~~~l~l~Dw~~~~~~~~~~~~ 217 (580)
T 3sqr_A 144 QCPIAPGDTLTYKFQV-TQYGTTWYHSHFSLQYGDGLFGPLIINGPATA-----DYDEDVGVIFLQDWAHESVFEIWDTA 217 (580)
T ss_dssp BCCBCTTCEEEEEEEC-CCCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEC-CCCcceEEeecccccccCcCEEEEEeeCcccC-----CCCccceEEEEEEEecCCHHHHHHHH
Confidence 9999999999999999 89999999999988887 99999999987643 467887 9999999999887776654
Q ss_pred cccCCCCCCCceEEEcCCCCCCCCCCC---------CceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCC
Q 008366 179 EITGVGPRISDAFTINGMPGDLYPCSE---------NQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAG 249 (568)
Q Consensus 179 ~~~g~~~~~~~~~~iNG~~g~~~~~~~---------~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~ 249 (568)
... ....++.++|||+ + .+.|+. ...+.+++++|++|||||||++....+.|+|+||+|+|||+||.
T Consensus 218 ~~~--~~~~~d~~liNG~-~-~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa~DG~ 293 (580)
T 3sqr_A 218 RLG--APPALENTLMNGT-N-TFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIANDLV 293 (580)
T ss_dssp TTS--CCCCBSEEEETTB-C-CCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTE
T ss_pred hcc--CCCCCceEEECCc-c-cCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEEeCCc
Confidence 432 2456789999999 3 345542 23589999999999999999999999999999999999999999
Q ss_pred CCCcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCc
Q 008366 250 YTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPT 329 (568)
Q Consensus 250 ~~~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~ 329 (568)
+++|+.++++.|.+||||||+|++++.+|+|||++.....+.. ........|||+|.++... .|..+.+.....
T Consensus 294 ~v~P~~~~~l~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~---~~~~~~~~aiL~Y~~~~~~---~P~~~~~~~~~~ 367 (580)
T 3sqr_A 294 PIVPYTTDTLLIGIGQRYDVIVEANAAADNYWIRGNWGTTCST---NNEAANATGILRYDSSSIA---NPTSVGTTPRGT 367 (580)
T ss_dssp EEEEEEESSEEECTTCEEEEEEECCSCSSEEEEECCCCTTTSC---BTTGGGCEEEEESSTTCCC---CCCCCCCCCCCC
T ss_pred cCCceEeeEEEEccceEEEEEEEeCCCCCeEEEEEecccccCc---cCCCCceEEEEEECCCCCC---CCCCCCCCccch
Confidence 9999999999999999999999999888999999988765532 2333468999999875432 233222222111
Q ss_pred c-ccccccCccCCCCCCCCCCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCC
Q 008366 330 A-YTFYSNITGLSGGPQWVPCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVG 408 (568)
Q Consensus 330 ~-~~~~~~l~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~ 408 (568)
. .....+|.++. +..++...+.++.+.++ .+..+.|++||.+|..+...|+|...+.+.
T Consensus 368 ~~~~~~~~L~P~~----~~~~~~~~~~~~~l~~~---------------~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~- 427 (580)
T 3sqr_A 368 CEDEPVASLVPHL----ALDVGGYSLVDEQVSSA---------------FTNYFTWTINSSSLLLDWSSPTTLKIFNNE- 427 (580)
T ss_dssp SCCSCGGGCCBSS----CCBCCSEEEEEEEEEEE---------------ESSSEEEEETTBCCCCCTTSCHHHHHHTTC-
T ss_pred hhcccccccccCC----CCCCCCccceEEEEEec---------------cCCceeEEECCEecccCCCCCchhhhhcCC-
Confidence 1 11112233321 22233333333333331 234678999999997643256555444321
Q ss_pred CcccCCCCCCCCcccccCCCCCCCCccccCCCCCceEEEc----ccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeC
Q 008366 409 GVYEPNFPNQPPVEFDYTNTNVSNDMSLLFPPKTTSVKML----KFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQG 484 (568)
Q Consensus 409 g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~ 484 (568)
.+++. ...++.+ +.|++|||+|+|.+. ....||||||||+|+||++|
T Consensus 428 ----~~~~~------------------------~~~~~~~~~~~~~~~~VeiVi~n~~~-~~~~HP~HLHGh~F~vv~~g 478 (580)
T 3sqr_A 428 ----TIFPT------------------------EYNVVALEQTNANEEWVVYVIEDLTG-FGIWHPIHLHGHDFFIVAQE 478 (580)
T ss_dssp ----CCCCG------------------------GGCEEEECC----CCEEEEEEEECSS-SCCCEEEEESSCCEEEEEEE
T ss_pred ----ccCCC------------------------CcceeecccccCCCcEEEEEEeCCCc-cccceeeEecCceEEEEecC
Confidence 11111 1133344 469999999999762 13899999999999999999
Q ss_pred CCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEec
Q 008366 485 FGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVEN 550 (568)
Q Consensus 485 ~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 550 (568)
.|.|+++.+...+|+.+|++||||.|+++||++|||++||||.|+|||||++|++.||+++|.+..
T Consensus 479 ~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~adNPG~W~~HCHi~~H~~~Gm~~~~~e~~ 544 (580)
T 3sqr_A 479 TDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLDNPGSWLLHCHIAWHASEGLAMQFVESQ 544 (580)
T ss_dssp SSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESCSCEEEEEEECSHHHHHTTCEEEEEESG
T ss_pred CCccCccccccccccCCCceeeEEEeCCCceEEEEEEcCCCeeeEEEECcHHHhhCCCcEEEEECH
Confidence 999998777778999999999999999999999999999999999999999999999999998753
No 3
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=100.00 E-value=7.3e-91 Score=744.49 Aligned_cols=457 Identities=29% Similarity=0.497 Sum_probs=359.1
Q ss_pred eEEEEEEEEEEeeccCceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCC-----CeeEEEccccccCCCCCCCCCCc
Q 008366 25 VVEHSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPY-----NITIHWHGIFQIRSIWADGPNMI 99 (568)
Q Consensus 25 ~~~~~~~~~~~~~~~~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~~ 99 (568)
...|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|.|++ +++|||||+++...+|+||++++
T Consensus 3 ~~~~~l~v~~~~~~pdG~~~~~~~~NG~~PGP~I~~~~GD~v~V~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~v 82 (499)
T 3pxl_A 3 GPVADLTITDAAVSPDGFSRQAVVVNGVTPGPLVAGNIGDRFQLNVIDNLTNHTMLKSTSIHWHGFFQHGTNWADGPAFI 82 (499)
T ss_dssp CSEEEEEEEEEEECTTSCCEEEEEETTBSSCCCEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTT
T ss_pred cceEEEEEEEEEEcCCCcEEEEEEECCcccCCeEEEeCCCEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCcc
Confidence 3579999999999999999999999999999999999999999999999984 79999999999988999999999
Q ss_pred ccccCCCCCeEEEEEEeCCCCCceeEecChhhhhh-cceEEEEEecCCCC-CCCCCCCCCceeEEEeecccCcHHHHHhh
Q 008366 100 TQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRA-TVHGAFIIRPKSGH-KYPFPKPDKEVPIVLGEWWNDDIMDVANR 177 (568)
Q Consensus 100 ~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~ 177 (568)
+||+|+||++|+|+|++++++||||||||...+.. ||+|+|||+++.+. ..++...++|++|+++||++.....
T Consensus 83 tq~pI~PG~s~tY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~~~~l~l~Dw~~~~~~~---- 158 (499)
T 3pxl_A 83 NQCPISPGHSFLYDFQVPDQAGTFWYHSHLSTQYCDGLRGPFVVYDPNDPHASRYDVDNDDTVITLADWYHTAAKL---- 158 (499)
T ss_dssp TBCCBCTTCEEEEEEECSSCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCTTT----
T ss_pred ccCCCCCCCeEEEEEEcCCCCceeeeeccchhHHhccceeEEEEcCCcccccccCCCCCceEEEEEEcccCCcccc----
Confidence 99999999999999999788999999999988876 99999999977542 1223233467899999999876421
Q ss_pred ccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCCcEEEe
Q 008366 178 GEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTD 257 (568)
Q Consensus 178 ~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d 257 (568)
.+..+..++.++|||+ +.++.+.....+.+++++|++|||||||++....+.|+|+||+|+|||+||.+++|+.++
T Consensus 159 ---~~~~p~~~d~~liNG~-~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 234 (499)
T 3pxl_A 159 ---GPRFPGGADATLINGK-GRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIEVDSVNSQPLEVD 234 (499)
T ss_dssp ---SCSSCSSCSEEEETTB-CCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred ---ccCCCCCCcEEEECCC-CcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEECCcccCceEee
Confidence 2233446899999999 655444445668999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccC
Q 008366 258 VVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNI 337 (568)
Q Consensus 258 ~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l 337 (568)
++.|.||||+||+|++++.+|+|+|++.....+. .+.+....|+|+|+++.... |..+..... ......+|
T Consensus 235 ~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~----~~~~~~~~ail~Y~~~~~~~---p~~~~~~~~--~~~~~~~L 305 (499)
T 3pxl_A 235 SIQIFAAQRYSFVLDANQAVDNYWIRANPNFGNV----GFDGGINSAILRYDGAPAVE---PTTNQTTSV--KPLNEVDL 305 (499)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC----SCGGGTTEEEEEETTSCSSC---CCCCCCCCS--SBCCGGGC
T ss_pred eEEECCCcEEEEEEECCCCCceEEEEEecccCcc----ccCCCceEEEEEeCCCCCCC---CCCCCCCCC--cccccccc
Confidence 9999999999999999987899999998754332 22233458999998864421 211111111 11112345
Q ss_pred ccCCCCCCCC-CCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCC
Q 008366 338 TGLSGGPQWV-PCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFP 416 (568)
Q Consensus 338 ~~~~~~~~~~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~ 416 (568)
+++.....|. ..+..+|+++.+.+++. +. .|++||++|..|+ .|+|...+.+ ....
T Consensus 306 ~p~~~~~~p~~~~~~~~d~~~~l~~~~~--------------~~--~w~iNg~s~~~~~-~P~L~~~~~g---~~~~--- 362 (499)
T 3pxl_A 306 HPLVSTPVPGAPSSGGVDKAINMAFNFN--------------GS--NFFINGASFVPPT-VPVLLQILSG---AQTA--- 362 (499)
T ss_dssp CBSSCCCCSSCSSTTCSSEEEECCEEEC--------------SS--CEEETTBCCCCCS-SCHHHHHHTT---CCST---
T ss_pred cccccccCCCcccCCCCcEEEEEEEEec--------------Cc--EEEEcCEecCCCC-CchhhhhhcC---Cccc---
Confidence 5554332222 23345677766554431 11 6899999999887 5544433322 1100
Q ss_pred CCCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCC
Q 008366 417 NQPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKN 496 (568)
Q Consensus 417 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~ 496 (568)
. .......++.++.|++|||+|+|.+......||||||||+|+||+.+ +...
T Consensus 363 -~-------------------~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~HP~HLHGh~F~Vl~~~--------g~~~ 414 (499)
T 3pxl_A 363 -Q-------------------DLLPSGSVYVLPSNASIEISFPATAAAPGAPHPFHLHGHTFAVVRSA--------GSTV 414 (499)
T ss_dssp -T-------------------TSSSTTSEEEECTTCEEEEEEECCTTSCSCSCEEEETTCCEEEEECT--------TCCC
T ss_pred -c-------------------ccCCCceeEEecCCCEEEEEEecCcccCCCCccceecCCcEEEEecc--------CCcc
Confidence 0 01122368899999999999995332345899999999999999864 2356
Q ss_pred CcCCCCCceeeEEeCC---CcEEEEEEEecCceeEEEEeecccccccccEEEEEEe
Q 008366 497 FNLVNPQRRNTIAVPI---GGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 497 ~~~~~p~~rDTv~vp~---~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
+|+.+|++||||.||+ ++|++|||++||||.|+|||||++|++.||+++|.+.
T Consensus 415 ~n~~~P~~rDtv~v~~~~pg~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~ 470 (499)
T 3pxl_A 415 YNYDNPIFRDVVSTGTPAAGDNVTIRFDTNNPGPWFLHCHIDFHLEGGFAVVMAED 470 (499)
T ss_dssp CCSSSCCEESEEECCCGGGTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEES
T ss_pred cccCCCCccceEEcCCcCCCcEEEEEEEcCCCceEEEEeCChhHhhCCCcEEEEEC
Confidence 7889999999999997 9999999999999999999999999999999999644
No 4
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=100.00 E-value=3.5e-91 Score=755.29 Aligned_cols=476 Identities=27% Similarity=0.451 Sum_probs=363.1
Q ss_pred CCceEEEEEEEEEEeeccCce-eeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC-----CCeeEEEccccccCCCCCCC
Q 008366 22 SAAVVEHSFQVKNLTIGRLCR-QQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP-----YNITIHWHGIFQIRSIWADG 95 (568)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~G~-~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~-----~~~~iH~HG~~~~~~~~~DG 95 (568)
.+...+|+|++++..++++|+ ++.+|+|||++|||+||+++||+|+|+|+|+|+ ++++|||||+++...+|+||
T Consensus 20 ~~~~~~~~l~i~~~~~~~dg~~~~~~~~~NG~~PGP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DG 99 (521)
T 1v10_A 20 LAATVALDLHILNANLDPDGTGARSAVTAEGTTIAPLITGNIDDRFQINVIDQLTDANMRRATSIHWHGFFQAGTTEMDG 99 (521)
T ss_dssp --CCSEEEEEEEEEEECTTSSCCEEEEEESSSSSCCCEEEETTCEEEEEEEECCCCTTSCCCBCEEEETCCCTTCGGGSC
T ss_pred cccCceEEEEEEEEEEcCCCcceEEEEEECCccCCCcEEEeCCCEEEEEEEECCCCccCCCCceEecCCeeccCCCccCC
Confidence 566778999999999999999 999999999999999999999999999999999 99999999999988899999
Q ss_pred CCCcccccCCCCCeEEEEEEeCCCCCceeEecChhhhhh-cceEEEEEecCCCC-CCCCCCCCCceeEEEeecccCcHHH
Q 008366 96 PNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRA-TVHGAFIIRPKSGH-KYPFPKPDKEVPIVLGEWWNDDIMD 173 (568)
Q Consensus 96 ~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~ 173 (568)
+++++||+|+||++++|+|++++++||||||||.+.+.. ||+|+|||+++.+. ..++...++|++|+++||+++...+
T Consensus 100 v~~vtq~~I~PG~s~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~D~~~~~~~~ 179 (521)
T 1v10_A 100 PAFVNQCPIIPNESFVYDFVVPGQAGTYWYHSHLSTQYCDGLRGAFVVYDPNDPHLSLYDVDDASTVITIADWYHSLSTV 179 (521)
T ss_dssp CBTTTBCCBCTTEEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCCC-
T ss_pred CcceeeCCcCCCCeEEEEEecCCCCccEEEEeccCCchhcCceEEEEEcCCcccccccCCCCCceeEEEEcccccCCHHH
Confidence 999999999999999999996689999999999998877 99999999987532 2223333479999999999887655
Q ss_pred HHhhccccCCCCCCCceEEEcCCCCCCCCCC--CCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCC
Q 008366 174 VANRGEITGVGPRISDAFTINGMPGDLYPCS--ENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT 251 (568)
Q Consensus 174 ~~~~~~~~g~~~~~~~~~~iNG~~g~~~~~~--~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~ 251 (568)
+... .+.....++.++|||+.. +.|. ....+.+++++|++|||||+|++....+.|+|+||+|+||+.||.++
T Consensus 180 ~~~~---~~~~~~~~d~~liNG~~~--~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~ 254 (521)
T 1v10_A 180 LFPN---PNKAPPAPDTTLINGLGR--NSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGVSH 254 (521)
T ss_dssp ---------CCCSCCSEEEETTBCC--CSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEE
T ss_pred Hhhc---cCCCCCCCCEEEECCccc--CCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEecCCccc
Confidence 4321 112234578999999942 4554 22348999999999999999999999999999999999999999999
Q ss_pred CcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccc
Q 008366 252 DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAY 331 (568)
Q Consensus 252 ~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~ 331 (568)
+|+.++++.|.||||+||+|++++.+|+|+|+++....+. .+......++|+|++..... |..+.. ... .
T Consensus 255 ~p~~~~~l~l~pgqR~dvlv~~~~~~g~y~i~~~~~~~~~----~~~~~~~~ail~y~~~~~~~---p~~~~~-~~~--~ 324 (521)
T 1v10_A 255 QPLTVDSLTIFAGQRYSVVVEANQAVGNYWIRANPSNGRN----GFTGGINSAIFRYQGAAVAE---PTTSQN-SGT--A 324 (521)
T ss_dssp EEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC----SCGGGTTEEEEEETTCCSCC---CCCCCC-CSC--B
T ss_pred cceeeeeEEEcccceEEEEEEcCCCCCceeeeeccccccc----cCCCCceeEEEEECCCCCCC---CCCCCC-ccc--c
Confidence 9999999999999999999999977899999998764322 12222346999998865421 211111 000 0
Q ss_pred cccccCccCCCCCCCC-CCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCc
Q 008366 332 TFYSNITGLSGGPQWV-PCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGV 410 (568)
Q Consensus 332 ~~~~~l~~~~~~~~~~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~ 410 (568)
....++.++.....+. ..+...+.++.+...+ .+....|++||++|..+. .|+|...+.+.
T Consensus 325 ~~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~~~~~~~~iNg~~~~~~~-~P~l~~~~~g~--- 386 (521)
T 1v10_A 325 LNEANLIPLINPGAPGNPVPGGADINLNLRIGR--------------NATTADFTINGAPFIPPT-VPVLLQILSGV--- 386 (521)
T ss_dssp CCGGGCCBSSCCCCSSCSSTTCSSEEEECCEEC--------------CSSSSCCEESSCCCCCCS-SCHHHHHHHTC---
T ss_pred cchhhcccCCcccCCCcccCCcceEEEEEEEec--------------CCceeEEEECCCcccCCC-CchhhhhhcCC---
Confidence 0012344443222221 1122344444333221 222347999999998887 45544433321
Q ss_pred ccCCCCCCCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCC
Q 008366 411 YEPNFPNQPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNA 490 (568)
Q Consensus 411 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~ 490 (568)
+. +. ....+..++.++.|++|||+++| . +.||||||||+|+||+++.+
T Consensus 387 ~~-------~~----------------~~~~~~~~~~v~~g~~vei~l~N--~---~~HP~HLHGh~F~Vl~~~~~---- 434 (521)
T 1v10_A 387 TN-------PN----------------DLLPGGAVISLPANQVIEISIPG--G---GNHPFHLHGHNFDVVRTPGS---- 434 (521)
T ss_dssp CC-------GG----------------GSSSTTTEEEECTTCEEEEEEEC--C---BSCEEEESSCCEEEEECTTC----
T ss_pred cc-------cc----------------cCCCCceEEEecCCCEEEEEEcC--C---CCCCEEEccceEEEEecCCC----
Confidence 10 00 11234478899999999999999 3 89999999999999999743
Q ss_pred CCCCCCCcCCCCCceeeEEe-CCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecCCCCCCCCCCCC-CCCCCC
Q 008366 491 SRDSKNFNLVNPQRRNTIAV-PIGGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVENGPTPSTMLPPPP-ADLPQC 568 (568)
Q Consensus 491 ~~~~~~~~~~~p~~rDTv~v-p~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p-~~~~~c 568 (568)
..+|+.+|.|||||.| |+++|++|||++||||.|+|||||++|++.|||++|.|..... .+..++| ...+.|
T Consensus 435 ----~~~n~~~p~~rDTV~V~p~gg~v~Irf~aDNPG~W~~HCHi~~H~~~GM~~~~~v~~~~~--~~~~~~p~~~~~~C 508 (521)
T 1v10_A 435 ----SVYNYVNPVRRDVVSIGGGGDNVTFRFVTDNPGPWFLHCHIDWHLEAGLAVVFAEDIPNI--PIANAISPAWDDLC 508 (521)
T ss_dssp ----SCCCCSSCCEESEEECCBSSCEEEEEEECCSCEEEEEEESCHHHHTTTCEEEEEESGGGH--HHHSCCCHHHHTHH
T ss_pred ----CccccCCCCeeeeEEeCCCCcEEEEEEEeCCCeeEEEeeChHHHHhCCCeEEEEECCcch--hhccCCChHHhhhc
Confidence 3467889999999999 8999999999999999999999999999999999999865432 2333344 456666
No 5
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=100.00 E-value=2e-89 Score=733.50 Aligned_cols=456 Identities=29% Similarity=0.484 Sum_probs=355.9
Q ss_pred EEEEEEEEEEeeccCceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCC-----CeeEEEccccccCCCCCCCCCCcc
Q 008366 26 VEHSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPY-----NITIHWHGIFQIRSIWADGPNMIT 100 (568)
Q Consensus 26 ~~~~~~~~~~~~~~~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~-----~~~iH~HG~~~~~~~~~DG~~~~~ 100 (568)
..|+|+|++..+++||+++.+|+|||++|||+||+++||+|+|+|+|.|++ +++|||||+++...+|+||+++++
T Consensus 5 ~~~~l~i~~~~~~pdg~~~~~~~~NG~~PGP~I~~~~GD~v~v~v~N~l~~~~~~~~tsiHwHGl~~~~~~~~DGv~~vt 84 (495)
T 3t6v_A 5 PVTDLHIVNADIVPDGFVRPAVNAGGTFPGPVIAGNVGDNFQIVTFNQLIECSMLVDTSIHWHGEFQKGTNWADGPAFIT 84 (495)
T ss_dssp SEEEEEEEEEEECTTSCCEEEEEETTSSSCCEEEEETTCEEEEEEEECCCCGGGCSCBCEEEETCCCTTCGGGSCCBTTT
T ss_pred CeEEEEEEEEEEcCCCceEEEEEECCcccCCeEEEECCcEEEEEEEECCCCccCCCceEEEeCCcccCCCccccCCCccc
Confidence 479999999999999999999999999999999999999999999999985 799999999999989999999999
Q ss_pred cccCCCCCeEEEEEEeCCCCCceeEecChhhhhh-cceEEEEEecCCCCC-CCCCCCCCceeEEEeecccCcHHHHHhhc
Q 008366 101 QCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRA-TVHGAFIIRPKSGHK-YPFPKPDKEVPIVLGEWWNDDIMDVANRG 178 (568)
Q Consensus 101 ~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~~-~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 178 (568)
||+|+||++|+|+|++++++||||||||...+.. ||+|+|||+++.+.. .++...++|++|+++||++.....+
T Consensus 85 q~pI~PG~sftY~f~~~~~~GT~wYHsH~~~q~~~GL~G~lIV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~---- 160 (495)
T 3t6v_A 85 QCPIIVGNSFSYNFNVPGMAGTYWYHSHLTTQYCDGLRGPFVVYDPNDPDANLYDVDDDTTIITLADWYHVLAKEM---- 160 (495)
T ss_dssp BCCBCTTCEEEEEEECTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSGGGEEEEEEECSSCGGGS----
T ss_pred cCCCCCCCeEEEEEEeCCCCceeeeeccchhHHhcCceEEEEEcCccccccccCCCCCceeEEEEecccCCchhhh----
Confidence 9999999999999999788999999999988876 999999999876431 2232334678999999998875321
Q ss_pred cccCCCCCCCceEEEcCCCCCCCCCC-CCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCCcEEEe
Q 008366 179 EITGVGPRISDAFTINGMPGDLYPCS-ENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTD 257 (568)
Q Consensus 179 ~~~g~~~~~~~~~~iNG~~g~~~~~~-~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d 257 (568)
.+..+..++.++|||+ +.+..+. ....+.+++++|++|||||+|++....+.|+|+||+|+|||+||.+++|+.++
T Consensus 161 --~~~~p~~~d~~liNG~-g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via~DG~~~~P~~~~ 237 (495)
T 3t6v_A 161 --GAGGAITADSTLIDGL-GRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIETDGVDSQELTVD 237 (495)
T ss_dssp --CSSSCCCCSEEEETTB-CCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEES
T ss_pred --ccCCCCCCcEEEECCc-CcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEEeCCcccCCEEee
Confidence 2233447899999999 5443332 23568999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccC
Q 008366 258 VVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNI 337 (568)
Q Consensus 258 ~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l 337 (568)
++.|.||||+||+|++++.+|+|+|++.....+. .+.+....|+|+|+++.... |..+... .........+|
T Consensus 238 ~l~i~pGqR~dvlv~~~~~~g~y~i~a~~~~~~~----~~~~~~~~ail~Y~~~~~~~---p~~~~~~-~~~~~~~~~~L 309 (495)
T 3t6v_A 238 EIQIFAAQRYSFVLNANQPVGNYWIRANPNSGGE----GFDGGINSAILRYDGATTAD---PVTVAST-VHTKCLIETDL 309 (495)
T ss_dssp BEEECTTCEEEEEEECCSCSSEEEEEEEESSSSC----SCGGGTTEEEEEETTSCSSC---CCCCCCS-SCSSBCCGGGC
T ss_pred eEEEcCceEEEEEEECCCCCceEEEEEecccCcc----ccCCCceEEEEEECCCCCCC---CCCCCCC-CCccccccccc
Confidence 9999999999999999987899999998754332 22233457999998764421 2111111 00011112245
Q ss_pred ccCCCCCCCC-CCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCC
Q 008366 338 TGLSGGPQWV-PCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFP 416 (568)
Q Consensus 338 ~~~~~~~~~~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~ 416 (568)
+++.....+. ..+..+|+++.+.+++. + ..|++||++|..|+ .|+|...+.+ .+..
T Consensus 310 ~p~~~~~~p~~~~~~~~d~~~~l~~~~~--------------~--~~w~iNg~s~~~~~-~P~L~~~~~g---~~~~--- 366 (495)
T 3t6v_A 310 HPLSRNGVPGNPHQGGADCNLNLSLGFA--------------C--GNFVINGVSFTPPT-VPVLLQICSG---ANTA--- 366 (495)
T ss_dssp CBSSCCCCSSCSSTTCSSEEEECCEEEE--------------T--TEEEETTBCCCCCS-SCHHHHHHTT---CCSS---
T ss_pred cccccccCCCccCCCCCcEEEEEEEEec--------------C--cEEEEcCEecCCCC-CcchhhhhcC---CcCc---
Confidence 5543322221 12345677766554321 1 17999999999887 5544333322 1100
Q ss_pred CCCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCC
Q 008366 417 NQPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKN 496 (568)
Q Consensus 417 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~ 496 (568)
. .......++.++.|++|||+|+|. .....||||||||+|+||+.+ +...
T Consensus 367 -~-------------------~~~~~~~v~~~~~g~~V~ivl~~n--~~~~~HP~HLHGh~F~vl~~~--------g~~~ 416 (495)
T 3t6v_A 367 -A-------------------DLLPSGSVISLPSNSTIEIALPAG--AAGGPHPFHLHGHDFAVSESA--------SNST 416 (495)
T ss_dssp -T-------------------TSSSTTSEEEECTTCEEEEEEECC--SSSCCCEEEETTCCEEEEECT--------TCCC
T ss_pred -c-------------------cccCCcceEEecCCCEEEEEEccC--CCCCCcceeecCCcEEEEecC--------CCCC
Confidence 0 011223688999999999999842 234899999999999999864 2356
Q ss_pred CcCCCCCceeeEEeCC-CcEEEEEEEecCceeEEEEeecccccccccEEEEEEe
Q 008366 497 FNLVNPQRRNTIAVPI-GGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 497 ~~~~~p~~rDTv~vp~-~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
+|+.+|++||||.|++ ++|++|||++||||.|+|||||++|++.||+++|.+.
T Consensus 417 ~n~~~P~~rDtv~v~~~g~~~~irf~adnPG~W~~HCHi~~H~~~Gm~~~~~e~ 470 (495)
T 3t6v_A 417 SNYDDPIWRDVVSIGGVGDNVTIRFCTDNPGPWFLHCHIDWHLDAGFAIVFAED 470 (495)
T ss_dssp CCSSSCCEESEEECCSTTCEEEEEEECCSCEEEEEEESCHHHHHTTCEEEEEET
T ss_pred cccCCCCCccEEEcCCCCcEEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEEC
Confidence 7889999999999997 8999999999999999999999999999999999754
No 6
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.5e-90 Score=745.20 Aligned_cols=463 Identities=26% Similarity=0.397 Sum_probs=361.4
Q ss_pred ceEEEEEEEEEEeeccCc-eeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CCeeEEEccccccCCCCCCCCCCccc
Q 008366 24 AVVEHSFQVKNLTIGRLC-RQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP-YNITIHWHGIFQIRSIWADGPNMITQ 101 (568)
Q Consensus 24 ~~~~~~~~~~~~~~~~~G-~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~~~~ 101 (568)
++++|+|+|++..+++|| +++.+|+|||++|||+||+++||+|+|+|+|.|+ ++++|||||+++...+|+||+++++|
T Consensus 1 ~~~~~~~~v~~~~~~pdG~~~~~~~~~Ng~~PGP~i~~~~Gd~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~~vtq 80 (534)
T 1zpu_A 1 ETHTFNWTTGWDYRNVDGLKSRPVITCNGQFPWPDITVNKGDRVQIYLTNGMNNTNTSMHFHGLFQNGTASMDGVPFLTQ 80 (534)
T ss_dssp CEEEEEEEEEEEEECSSSSCCEEEEEETTBSSCCCEEEETTCEEEEEEECCCSSCCBCCEEETCCCTTCGGGSCCBTTTB
T ss_pred CEEEEEEEEEEEEecCCCCceEEEEEECCccCCccEEEECCCEEEEEEEeCCCCCCeeEEcCCcccCCCCcccCCCcccc
Confidence 478999999999999999 8999999999999999999999999999999998 99999999999998889999999999
Q ss_pred ccCCCCCeEEEEEEeCCCCCceeEecChhhhhh-cceEEEEEecCCCCCCCCCCCCCceeEEEeecccCcHHHHHhhccc
Q 008366 102 CPIRPGNSYTYKFRIINQEGTLWWHAHISMLRA-TVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGEI 180 (568)
Q Consensus 102 ~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~~ 180 (568)
|+|+||++++|+|++++++||||||||.+.+.. ||+|+|||+++.. |+ .+|+|++|+++||+++...++......
T Consensus 81 ~pI~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~---p~-~~d~e~~l~l~Dw~~~~~~~~~~~~~~ 156 (534)
T 1zpu_A 81 CPIAPGSTMLYNFTVDYNVGTYWYHSHTDGQYEDGMKGLFIIKDDSF---PY-DYDEELSLSLSEWYHDLVTDLTKSFMS 156 (534)
T ss_dssp CCBCTTCEEEEEEECSSCCEEEEEECCSSSGGGGTCEEEEEEECTTC---CS-CCSEEEEEEEEEECSSCHHHHHHHHSS
T ss_pred CCcCCCCeEEEEEEeCccceeEEEEEcCcccccCcceeeEEeCCCCC---CC-CCcceEEEEeeccccCCHHHHHHHHhc
Confidence 999999999999999559999999999998877 9999999999863 23 568899999999999988776554322
Q ss_pred c---CCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCCcEEEe
Q 008366 181 T---GVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTD 257 (568)
Q Consensus 181 ~---g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d 257 (568)
. .+....++.++|||+. .+.++|++|++|||||||++....+.|+|+||+|+||+.||.+++|..++
T Consensus 157 ~~~~~g~~~~~d~~liNG~~----------~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~P~~~~ 226 (534)
T 1zpu_A 157 VYNPTGAEPIPQNLIVNNTM----------NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVEIDGITTEKNVTD 226 (534)
T ss_dssp TTCTTCCCCCCSEEEETTBS----------SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEEES
T ss_pred cccCCCCCCCCceEEECCCC----------ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEeccCcCccccEec
Confidence 1 1223467899999993 47999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCceEEEEEEeCCC-CceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccc-cc
Q 008366 258 VVVIAPGQTTDVLLKADQP-VGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTF-YS 335 (568)
Q Consensus 258 ~~~l~pg~r~dv~~~~~~~-~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~-~~ 335 (568)
++.|+||||+||+|++++. .|+|+|++.....+....+........++|+|.++...+ ..+....... ++ ..
T Consensus 227 ~l~l~~gqR~dvlv~~~~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~p----~~~~~~~~~~--~~~~~ 300 (534)
T 1zpu_A 227 MLYITVAQRYTVLVHTKNDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAALP----TQNYVDSIDN--FLDDF 300 (534)
T ss_dssp CEEECTTCEEEEEEECCSCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSCBC----CCCCCSCSSC--SCCGG
T ss_pred eEEECccceEEEEEEcCCCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCCCC----CCCccccccc--ccccc
Confidence 9999999999999999854 478999987654321111122234578999998764311 1110110000 00 01
Q ss_pred cCccCCCCCCCCCCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCC
Q 008366 336 NITGLSGGPQWVPCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNF 415 (568)
Q Consensus 336 ~l~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~ 415 (568)
.++++.. ...+..+++++.+.+.+... ..+ ...|.+||++|..|+ .|+|...+.. |.+
T Consensus 301 ~l~p~~~----~~~~~~~~~~~~l~~~~~~~----------~~~-~~~~~iNg~s~~~~~-~P~L~~~~~~--~~~---- 358 (534)
T 1zpu_A 301 YLQPYEK----EAIYGEPDHVITVDVVMDNL----------KNG-VNYAFFNNITYTAPK-VPTLMTVLSS--GDQ---- 358 (534)
T ss_dssp GCCBSSC----CCCCCSCSEEEEEEEEEEEC----------TTS-CEEEEETTBCCCCCS-SCHHHHHTTS--GGG----
T ss_pred cceeCCC----CCCCCCCCeEEEEEEEeecc----------CCc-eeEEEECCCcccCCC-CCceeeeccc--Ccc----
Confidence 1332221 12334567777776654321 012 346899999999887 5544332221 111
Q ss_pred CCCCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCC---------
Q 008366 416 PNQPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFG--------- 486 (568)
Q Consensus 416 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g--------- 486 (568)
... +. ....++.++.++.|++|||+|+|.+. +.||||||||+|+||+++.+
T Consensus 359 ~~~-~~----------------~~~~~~~~~~~~~g~~v~ivi~N~~~---~~HP~HLHGh~F~Vl~~~~~~~~~~~G~p 418 (534)
T 1zpu_A 359 ANN-SE----------------IYGSNTHTFILEKDEIVEIVLNNQDT---GTHPFHLHGHAFQTIQRDRTYDDALGEVP 418 (534)
T ss_dssp TTC-GG----------------GGCSSSCEEEECTTCEEEEEEEECSS---SCEEEEETTCCEEEEEECCCCCGGGTCCC
T ss_pred cCC-Cc----------------ccCCCceEEEeCCCCEEEEEEeCCCC---CCCCeEecCCceEEEeecCCccccccCcc
Confidence 000 11 11223477899999999999999765 89999999999999999864
Q ss_pred -CCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEec
Q 008366 487 -NYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVEN 550 (568)
Q Consensus 487 -~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 550 (568)
.|++.. ... ...+|.|||||.|++++|++|||++||||.|+|||||++|++.|||++|.|..
T Consensus 419 ~~~~~~~-~~~-~~~~p~~RDTv~V~pgg~v~IrF~aDNPG~W~~HCHi~~H~~~GM~~~~~~~~ 481 (534)
T 1zpu_A 419 HSFDPDN-HPA-FPEYPMRRDTLYVRPQSNFVIRFKADNPGVWFFHCHIEWHLLQGLGLVLVEDP 481 (534)
T ss_dssp CCCBTTB-CCC-CCSSCEEESEEEECTTCEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECH
T ss_pred cccCccc-ccc-ccCCCCeeeEEEeCCCCEEEEEEEeCCCeeEEEEeCchhHhhcCCeEEEEECc
Confidence 444431 112 24689999999999999999999999999999999999999999999998764
No 7
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=100.00 E-value=3.1e-87 Score=729.69 Aligned_cols=469 Identities=27% Similarity=0.439 Sum_probs=360.9
Q ss_pred CCceEEEEEEEEEEe--eccCcee-eeEEEECCCCCCCeEEEecCCEEEEEEEeCC-CCCeeEEEccccccCCCCCCCCC
Q 008366 22 SAAVVEHSFQVKNLT--IGRLCRQ-QTITAVNGSLPGPTIRVQEGDTLIVHVSNES-PYNITIHWHGIFQIRSIWADGPN 97 (568)
Q Consensus 22 ~~~~~~~~~~~~~~~--~~~~G~~-~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l-~~~~~iH~HG~~~~~~~~~DG~~ 97 (568)
.+++++|+|++++.. ++++|+. +.+|+|||++|||+||+++||+|+|+|+|.| .++++|||||+++...+|+||++
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~Ng~~PGP~i~~~~GD~v~v~v~N~l~~~~tsiHwHG~~~~~~~~~DG~~ 109 (559)
T 2q9o_A 30 TGVTQSYVFNLTEVDNWMGPDGVVKEKVMLINGNIMGPNIVANWGDTVEVTVINNLVTNGTSIHWHGIXQKDTNLHDGAN 109 (559)
T ss_dssp CCCEEEEEEEEEEEEEEECTTSCEEEEEEEETTBSSCCCEEEETTCEEEEEEEEECSSCCBCEEEETCCCTTCGGGSCCB
T ss_pred CCeEEEEEEEEEEeEeeECCCCccceEEEEECCcccCCcEEEeCCCEEEEEEEeCCCCCCceEEcCCCccCCCCCcCCCC
Confidence 577899999999999 8899999 9999999999999999999999999999999 68999999999998888999999
Q ss_pred CcccccCCC-CCeEEEEEEeCCCCCceeEecChhhhhh-cceEEEEEecCCCCCCCCCCCCCce-eEEEeecccCcHHHH
Q 008366 98 MITQCPIRP-GNSYTYKFRIINQEGTLWWHAHISMLRA-TVHGAFIIRPKSGHKYPFPKPDKEV-PIVLGEWWNDDIMDV 174 (568)
Q Consensus 98 ~~~~~~i~P-G~~~~y~f~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~-~l~~~d~~~~~~~~~ 174 (568)
+++||+|+| |++++|+|++ .++||||||||...+.. ||+|+|||+++... .+|+|. +|+++||+++...++
T Consensus 110 ~~tq~~I~P~G~~~~Y~f~~-~q~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~-----~~d~d~~~l~l~Dw~~~~~~~~ 183 (559)
T 2q9o_A 110 GVTECPIPPKGGQRTYRWRA-RQYGTSWYHSHFSAQYGNGVVGTIQINGPASL-----PYDIDLGVFPITDYYYRAADDL 183 (559)
T ss_dssp TTTBCCBCTTTEEEEEEEEC-CSCEEEEEEECSTTGGGGTCEEEEEEECCCSS-----CCSEEEEEEEEEEECSSCHHHH
T ss_pred ccccCccCCCCCeEEEEEEC-CCCEEEEEEEcccchhcCCceEEEEecCCCcC-----CCcccceEEEEeccccCCHHHH
Confidence 999999999 9999999998 88999999999988776 99999999987643 467787 999999999987776
Q ss_pred HhhccccCCCCCCCceEEEcCCCCCCCCCC-CCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCCc
Q 008366 175 ANRGEITGVGPRISDAFTINGMPGDLYPCS-ENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDP 253 (568)
Q Consensus 175 ~~~~~~~g~~~~~~~~~~iNG~~g~~~~~~-~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p 253 (568)
..... .+....++.++|||+... .|. ....+.+++++|++|||||||++....+.|+|+||+|+||+.||.+++|
T Consensus 184 ~~~~~--~~~~~~~d~~liNG~~~~--~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~~DG~~~~p 259 (559)
T 2q9o_A 184 VHFTQ--NNAPPFSDNVLINGTAVN--PNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIAADMVPVNA 259 (559)
T ss_dssp HHHHT--TSCCCCBSEEEETTBCBC--TTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEE
T ss_pred hhhhh--cCCCCccceeEECCcccc--CcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEecCCcccCc
Confidence 54322 223345789999999532 343 2235789999999999999999999999999999999999999999999
Q ss_pred EEEeEEEECCCceEEEEEEeCCCCceeEEEEee--ccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccc
Q 008366 254 YVTDVVVIAPGQTTDVLLKADQPVGSYYMAARA--YAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAY 331 (568)
Q Consensus 254 ~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~--~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~ 331 (568)
+.++++.|+||||+||+|++++.+|.|+|++.. ...+.. .......++|+|.++... +|..+.+..... .
T Consensus 260 ~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~----~~~~~~~ail~y~~~~~~---~P~~~~~~~~~~-~ 331 (559)
T 2q9o_A 260 MTVDSLFLAVGQRYDVVIDASRAPDNYWFNVTFGGQAACGG----SLNPHPAAIFHYAGAPGG---LPTDEGTPPVDH-Q 331 (559)
T ss_dssp EEESCEEECTTCEEEEEEECCSCSSEEEEEEECCGGGTTCC----BSSSCCEEEEEETTSCCS---CCCCCCCCCCCC-T
T ss_pred eEeCeEEEccEEEEEEEEECCCCCCcEEEEEEeccccccCC----CCCCceeEEEEECCCCCC---CCCCCCCcCCCc-c
Confidence 999999999999999999999778999999987 333321 122346899999876441 222211110000 0
Q ss_pred ccc-ccCccCCCCCCCCC-CCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCC
Q 008366 332 TFY-SNITGLSGGPQWVP-CPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGG 409 (568)
Q Consensus 332 ~~~-~~l~~~~~~~~~~~-~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g 409 (568)
+.. ..+.+......+.. .....+.++.+.... ..+....|++||++|..+...|+|...+.+.
T Consensus 332 ~~~~~~l~p~~~~~~p~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~-- 396 (559)
T 2q9o_A 332 CLDTLDVRPVVPRSVPVNSFVKRPDNTLPVALDL-------------TGTPLFVWKVNGSDINVDWGKPIIDYILTGN-- 396 (559)
T ss_dssp TCCCSCCCBSSCCBCCCTTCCCCGGGEEEEEEEC-------------SSSSSCEEEETTBCCCCCTTSCHHHHHHHTC--
T ss_pred cccccccccCCCCCCCCcccccceeEEEEEEeec-------------CCCceEEEEECCEecccCCCCCcHhHhhcCC--
Confidence 000 12222211111110 111122333333221 0233568999999997654356655444331
Q ss_pred cccCCCCCCCCcccccCCCCCCCCccccCCCCCceEEEccc-CCEEEEEEEeCCc-CCCCCCceeecCCcEEEEEeCC--
Q 008366 410 VYEPNFPNQPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKF-NSTVEMVLQNTAL-IAVESHPMHLHGYDFYVLAQGF-- 485 (568)
Q Consensus 410 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ve~~l~N~~~-~~~~~HP~HlHG~~F~Vv~~~~-- 485 (568)
..|+ .+..++.++. +++++|+++|... ...+.||||||||+|+||+++.
T Consensus 397 ---~~~~------------------------~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~HP~HLHGh~F~Vl~~g~~~ 449 (559)
T 2q9o_A 397 ---TSYP------------------------VSDNIVQVDAVDQWTYWLIENDPEGPFSLPHPMHLHGHDFLVLGRSPDV 449 (559)
T ss_dssp ---CCCC------------------------GGGCEEEECCSSCEEEEEEEECTTSSCCCCEEEEESSSCEEEEEESCCC
T ss_pred ---ccCC------------------------CCceEEEcCCCCEEEEEEEeCCCccccCCCCcEEECCCceEEEeccccc
Confidence 0111 1225566654 5678888888541 0148999999999999999987
Q ss_pred -------CCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEec
Q 008366 486 -------GNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVEN 550 (568)
Q Consensus 486 -------g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 550 (568)
|.|++..+...+++.+|+|||||.||+++|++|||++||||.|||||||++|++.|||++|.|..
T Consensus 450 ~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~adNPG~W~~HCHil~H~~~GM~~~~~v~~ 521 (559)
T 2q9o_A 450 PAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTDNPGAWLFHCHIAWHVSGGLSVDFLERP 521 (559)
T ss_dssp CTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECCSCEEEEEEECCHHHHHTTCEEEEEECH
T ss_pred ccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcCCCeeEEEEecchhHhhcCCeEEEEECc
Confidence 77776433466888999999999999999999999999999999999999999999999999864
No 8
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=100.00 E-value=2.4e-87 Score=722.88 Aligned_cols=471 Identities=28% Similarity=0.495 Sum_probs=357.3
Q ss_pred EEEEEEEEEeeccCceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC-----CCeeEEEccccccCCCCCCCCCCccc
Q 008366 27 EHSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP-----YNITIHWHGIFQIRSIWADGPNMITQ 101 (568)
Q Consensus 27 ~~~~~~~~~~~~~~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~-----~~~~iH~HG~~~~~~~~~DG~~~~~~ 101 (568)
.|+|++++..++++|+++.+|+|||++ ||+||+++||+|+|+|+|.|+ ++++|||||+++...+|+||+++++|
T Consensus 6 ~~~l~i~~~~~~~~g~~~~~~~~NG~~-GP~i~~~~Gd~v~v~v~N~l~~~~~~~~tsiHwHG~~~~~~~~~DGv~~vtq 84 (503)
T 1hfu_A 6 VDTMTLTNANVSPDGFTRAGILVNGVH-GPLIRGGKNDNFELNVVNDLDNPTMLRPTSIHWHGLFQRGTNWADGADGVNQ 84 (503)
T ss_dssp EEEEEEEEEEECTTSCCEEEEEETTBS-SCEEEEETTCCEEEEEEECCCCTTSCCSBCEEEETCCCTTCGGGSCCBTTTB
T ss_pred eEEEEEEEEEECCCCeEEEEEEECCcc-CCcEEEeCCCEEEEEEEeCCCCccCCCcccEeccceeccCCCccCCCccccc
Confidence 799999999999999999999999999 999999999999999999999 99999999999988889999999999
Q ss_pred ccCCCCCeEEEEEEeCCCCCceeEecChhhhhh-cceEEEEEecCCCC-CCCCCCCCCceeEEEeecccCcHHHHHhhcc
Q 008366 102 CPIRPGNSYTYKFRIINQEGTLWWHAHISMLRA-TVHGAFIIRPKSGH-KYPFPKPDKEVPIVLGEWWNDDIMDVANRGE 179 (568)
Q Consensus 102 ~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~-~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~ 179 (568)
|+|+||++++|+|++++++||||||||.+.+.. ||+|+|||+++.+. ..++...++|++|+++||+++...++.
T Consensus 85 ~~I~PG~~~~Y~f~~~~~~GT~wYH~H~~~q~~~Gl~G~liV~~~~~~~~~~~~~d~~e~~l~l~Dw~~~~~~~~~---- 160 (503)
T 1hfu_A 85 CPISPGHAFLYKFTPAGHAGTFWYHSHFGTQYCDGLRGPMVIYDDNDPHAALYDEDDENTIITLADWYHIPAPSIQ---- 160 (503)
T ss_dssp CCBCTTCEEEEEECCTTCCEEEEEEECSTTGGGGTCEEEEEEECTTCTTGGGCSBCSTTSEEEEEEECSSCGGGCC----
T ss_pred CCcCCCCeEEEEEEeCCCCccEEEEecchhhhhCcceeeEEEcCCCCCcccCCCCCCceEEEEEcccccCChHHhc----
Confidence 999999999999996589999999999998877 99999999987532 222333346999999999998754321
Q ss_pred ccCCCCCCCceEEEcCCCCCCCCCCC-CceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCCcEEEeE
Q 008366 180 ITGVGPRISDAFTINGMPGDLYPCSE-NQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDV 258 (568)
Q Consensus 180 ~~g~~~~~~~~~~iNG~~g~~~~~~~-~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~ 258 (568)
+ ...++.++|||+. .+.|.. ...+.+++++|++|||||+|++....+.|+|+||+|+||+.||.+++|+.+++
T Consensus 161 --~--~~~~d~~liNG~~--~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~p~~~~~ 234 (503)
T 1hfu_A 161 --G--AAQPDATLINGKG--RYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIEVDGELTEPHTVDR 234 (503)
T ss_dssp -------CCSEEEETTBC--CBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEEETTEEEEEEEESB
T ss_pred --C--CCCCCEEEECccc--ccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEeccCccccccccCe
Confidence 1 1357899999994 255643 34489999999999999999999999999999999999999999999999999
Q ss_pred EEECCCceEEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccCc
Q 008366 259 VVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNIT 338 (568)
Q Consensus 259 ~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~ 338 (568)
+.|.||||+||+|++++.+|+|+|++.....+......+......++|+|+++....+..+..+... .. ...+++
T Consensus 235 l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~~~--~l---~~~~l~ 309 (503)
T 1hfu_A 235 LQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPNPA--QL---NEADLH 309 (503)
T ss_dssp EEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSSCC--BC---CGGGCB
T ss_pred EEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCccC--CC---cccccc
Confidence 9999999999999999778999999987542211000022223479999987654211111111100 00 012344
Q ss_pred cCCCCCCCC-CCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCC
Q 008366 339 GLSGGPQWV-PCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPN 417 (568)
Q Consensus 339 ~~~~~~~~~-~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~ 417 (568)
++.....+. ..+...+..+.+..++ .+. .|++||++|..+. .|+|...+.+ .+.
T Consensus 310 p~~~~~~p~~~~~~~~~~~~~l~~~~--------------~~~--~~~iNg~~~~~~~-~P~l~~~~~g---~~~----- 364 (503)
T 1hfu_A 310 ALIDPAAPGIPTPGAADVNLRFQLGF--------------SGG--RFTINGTAYESPS-VPTLLQIMSG---AQS----- 364 (503)
T ss_dssp BSSSCSCSSCSSTTCSSEEEECCEEE--------------ETT--EEEETTBCCCCCS-SCHHHHHHTT---CCS-----
T ss_pred ccCccCCCCcccCCcceEEEEEEeec--------------cCc--eEEECCCccCCCC-CcchhhhhcC---Ccc-----
Confidence 433222221 1122344444322211 122 7899999999887 4555443322 110
Q ss_pred CCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCC
Q 008366 418 QPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNF 497 (568)
Q Consensus 418 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~ 497 (568)
+. ....+..++.++.|++|||+++|.. ..+.||||||||+|+||+++.+ ..+
T Consensus 365 --~~----------------~~~~~~~~~~v~~g~~vei~l~~n~--~~~~HP~HLHGh~F~Vl~~~~~--------~~~ 416 (503)
T 1hfu_A 365 --AN----------------DLLPAGSVYELPRNQVVELVVPAGV--LGGPHPFHLHGHAFSVVRSAGS--------STY 416 (503)
T ss_dssp --GG----------------GSSSTTSEEEECSSCEEEEEEECCS--TTCCCEEEETTCCEEEEECTTC--------CCC
T ss_pred --cc----------------cCCCCceEEEccCCCEEEEEEECCC--CCCCCCEEEecceEEEEecCCC--------Ccc
Confidence 00 1223457889999999999999643 2489999999999999999743 346
Q ss_pred cCCCCCceeeEEe-CCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecCCCCCCCCCCCC-CCCCCC
Q 008366 498 NLVNPQRRNTIAV-PIGGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVENGPTPSTMLPPPP-ADLPQC 568 (568)
Q Consensus 498 ~~~~p~~rDTv~v-p~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p-~~~~~c 568 (568)
++.+|.|||||.| |+++|++|||++||||.|+|||||++|++.|||++|.|.... ..++.++| ...+.|
T Consensus 417 n~~~p~~rDTV~V~ppg~~v~irf~adnPG~W~~HCHil~H~~~GM~~~~~v~~~~--~~~~~~~p~~~~~~C 487 (503)
T 1hfu_A 417 NFVNPVKRDVVSLGVTGDEVTIRFVTDNPGPWFFHCHIEFHLMNGLAIVFAEDMAN--TVDANNPPVEWAQLC 487 (503)
T ss_dssp CCSSBCEESEEECCSTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEECHHH--HHHHCCCCHHHHHHH
T ss_pred ccCCCCeeeeEEecCCCceEEEEEEcCCCeeeeEecCchhHhhCCCeEEEEECchh--hhhccCCChHHhhhc
Confidence 7889999999999 999999999999999999999999999999999999986432 22333344 445565
No 9
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=100.00 E-value=9.6e-81 Score=661.42 Aligned_cols=409 Identities=22% Similarity=0.350 Sum_probs=320.2
Q ss_pred CCceEEEEEEEEEEeeccCceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCccc
Q 008366 22 SAAVVEHSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQ 101 (568)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~ 101 (568)
.+.+++|+|++++..++++|+++.+|+|||++|||+||+++||+|+|+|+|.++++++|||||+++.+ |+||++
T Consensus 13 ~~~~~~~~l~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~---- 86 (439)
T 2xu9_A 13 QGGLLSLKLSATPTPLAIAGQRATLLTYGGSFPGPTLRVRPRDTVRLTLENRLPEPTNLHWHGLPISP--KVDDPF---- 86 (439)
T ss_dssp BTTEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEECTTCEEEEEEEECSSSCBCCEEETCCCCT--TTSCTT----
T ss_pred CCCeEEEEEEEEEEEEEcCCceEEEEEECCcccCCEEEEeCCCEEEEEEEECCCCCcceEeCCCCCCc--cccCCc----
Confidence 45678999999999999999999999999999999999999999999999999999999999999875 689986
Q ss_pred ccCCCCCeEEEEEEeC-CCCCceeEecChhh----hhh-cceEEEEEecCCCCCCCCCCCCCceeEEEeecccCcHHHHH
Q 008366 102 CPIRPGNSYTYKFRII-NQEGTLWWHAHISM----LRA-TVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVA 175 (568)
Q Consensus 102 ~~i~PG~~~~y~f~~~-~~~Gt~~YH~h~~~----~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~ 175 (568)
+.|+||++++|+|+++ +++||||||||.++ +.. ||+|+|||+++.+.. +...+++|++|+++||+.+... ..
T Consensus 87 ~~I~PG~~~~Y~f~~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~-~~~~~~~e~~l~l~D~~~~~~~-~~ 164 (439)
T 2xu9_A 87 LEIPPGESWTYEFTVPKELAGTFWYHPHLHGRVAPQLFAGLLGALVVESSLDAI-PELREAEEHLLVLKDLALQGGR-PA 164 (439)
T ss_dssp CCBCTTCEEEEEEECCSSCCEEEEEECCCTTSHHHHHHTTCCEEEEECCGGGGS-HHHHTSEEEEEEEEEECEETTE-EC
T ss_pred ccCCCCCeEEEEEecCCCCCcceEeccCCCCchHHHHHhhCeEEEEEcCccccC-ccCCCCCcEEEEEEeeeeCCCC-cC
Confidence 4699999999999985 48999999999864 333 999999999875321 1113578999999999987520 00
Q ss_pred hhccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCC-CcE
Q 008366 176 NRGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT-DPY 254 (568)
Q Consensus 176 ~~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-~p~ 254 (568)
............++.++|||+. .|.+++++| +|||||+|++....+.|+|+||+|+||+.||.++ +|+
T Consensus 165 ~~~~~~~~~g~~~~~~~iNG~~----------~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~~DG~~~~~p~ 233 (439)
T 2xu9_A 165 PHTPMDWMNGKEGDLVLVNGAL----------RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIAADGGFLEEPL 233 (439)
T ss_dssp CCCHHHHHHCCCCSEEEETTEE----------SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEEETTEEEEEEE
T ss_pred CCCccccccCCCCCEEEECCcc----------CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEecCCCCCCCce
Confidence 0000000011246799999993 478999999 9999999999999999999999999999999998 899
Q ss_pred EEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCCc---c--------ccCCCcceEEEEEEcCCCCCCCCCCCCCC
Q 008366 255 VTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPT---I--------VAFDNTTTRGIVVYDGASTANPIMPALPA 323 (568)
Q Consensus 255 ~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~---~--------~~~~~~~~~ail~y~~~~~~~~~~p~~~~ 323 (568)
.++++.|.||||+||+|++++ +|+|+++|+....+... . .........++++|.+.... ..+|..
T Consensus 234 ~~~~l~l~pgeR~dv~v~~~~-~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~p~~-- 309 (439)
T 2xu9_A 234 EVSELLLAPGERAEVLVRLRK-EGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNPKP-LPLPKA-- 309 (439)
T ss_dssp EESCEEECTTCEEEEEEECCS-SEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSCCC-CCCCSC--
T ss_pred EeceEEECCceeEEEEEEcCC-CceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCCcc-ccCccc--
Confidence 999999999999999999995 89999999865543210 0 00122356889999875431 111210
Q ss_pred CCCCCccccccccCccCCCCCCCCCCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhh
Q 008366 324 YNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAY 403 (568)
Q Consensus 324 ~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~ 403 (568)
+.++.. ...+ ..++++.+..+. . + ..|.+||++|..+.
T Consensus 310 -------------l~~~~~----l~~~-~~~r~~~l~~~~--~------------g--~~~~iNg~~~~~~~-------- 347 (439)
T 2xu9_A 310 -------------LSPFPT----LPAP-VVTRRLVLTEDM--M------------A--ARFFINGQVFDHRR-------- 347 (439)
T ss_dssp -------------CCCCCC----CCCC-SEEEEEEEEEEG--G------------G--TEEEETTBCCCTTC--------
T ss_pred -------------CCCccc----CCCC-CcceEEEEEeec--c------------C--ceEeECCEECCCCC--------
Confidence 111100 0011 123555554432 1 1 26899998874332
Q ss_pred hhcCCCcccCCCCCCCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEe
Q 008366 404 FFNVGGVYEPNFPNQPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQ 483 (568)
Q Consensus 404 ~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~ 483 (568)
..+.+++|++++|+|.|.+. +.||||||||+||||++
T Consensus 348 ----------------------------------------~~~~~~~g~~~~~~~~N~~~---~~HP~HLHG~~F~Vl~~ 384 (439)
T 2xu9_A 348 ----------------------------------------VDLKGQAQTVEVWEVENQGD---MDHPFHLHVHPFQVLSV 384 (439)
T ss_dssp ----------------------------------------CCEEECTTCEEEEEEEECSS---SCEEEEESSCCBEEEEE
T ss_pred ----------------------------------------CceecCCCCEEEEEEEcCCC---CCCCceeCCCcEEEEee
Confidence 22468899999999999765 89999999999999999
Q ss_pred CCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEe
Q 008366 484 GFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 484 ~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
+.+.+ .+|.|||||.|+++++++|||++||||.|+|||||++|++.|||+.|+|+
T Consensus 385 ~g~~~-----------~~p~~rDTv~v~p~~~v~i~f~adnpG~w~~HCHil~H~~~GMm~~~~Vg 439 (439)
T 2xu9_A 385 GGRPF-----------PYRAWKDVVNLKAGEVARLLVPLREKGRTVFHCHIVEHEDRGMMGVLEVG 439 (439)
T ss_dssp TTEEC-----------SSCCCBSEEEECTTCEEEEEEECCSCEEEEEEESSHHHHHTTCEEEEEEC
T ss_pred CCCCC-----------CCCCCeEEEEeCCCCEEEEEEEcCCCCCEEEECCcchhhhcCCcEEEEeC
Confidence 64322 36899999999999999999999999999999999999999999999984
No 10
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=100.00 E-value=4.1e-79 Score=649.55 Aligned_cols=408 Identities=16% Similarity=0.220 Sum_probs=314.0
Q ss_pred eEEEEEEEEEEeecc-CceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCccccc
Q 008366 25 VVEHSFQVKNLTIGR-LCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCP 103 (568)
Q Consensus 25 ~~~~~~~~~~~~~~~-~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~ 103 (568)
+++|+|++++..+++ +|+.+.+|+|||++|||+||+++||+|+|+|+|.|+++++|||||+++... +||++ ||+
T Consensus 18 ~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~~--~DG~~---~~~ 92 (451)
T 2uxt_A 18 GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMTVAGLQVPGP--LMGGP---ARM 92 (451)
T ss_dssp SCCEEEEEEECCGGGCSSSSSCCEEETTSSBCCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCGG--GSCSG---GGC
T ss_pred ceEEEEEEEEEEEEcCCCceeEEEEECCcccCceEEEeCCCEEEEEEEECCCCCccEEECCccCCCC--CCCCC---cCc
Confidence 578999999999988 799999999999999999999999999999999999999999999999876 69997 899
Q ss_pred CCCCCeEEEEEEeCCCCCceeEecChhhh----hh-cceEEEEEecCCCCCCCCCC--CCCceeEEEeecccCcHHHHHh
Q 008366 104 IRPGNSYTYKFRIINQEGTLWWHAHISML----RA-TVHGAFIIRPKSGHKYPFPK--PDKEVPIVLGEWWNDDIMDVAN 176 (568)
Q Consensus 104 i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~----~~-Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~ 176 (568)
|+||++++|+|++++++||||||||.++. .. ||+|+|||+++.+...+++. .++|++|+++||+.+...++..
T Consensus 93 i~PG~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~~p~~y~~~e~~l~l~D~~~~~~~~~~~ 172 (451)
T 2uxt_A 93 MSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGMWLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEY 172 (451)
T ss_dssp BCTTCEECCEEECCSCSEEEEEEECCTTTHHHHHHTTCEEEEEEECHHHHHSSSCCCBTTTEEEEEEEEEEECTTSCEEC
T ss_pred CCCCCeEEEEEEcCCCCcceEEecCCCCchhhhHhhcceEEEEEecCcccccCCCccCCCceEEEEEEeeecCCCCceec
Confidence 99999999999994459999999998553 33 99999999987654333333 4789999999999876433221
Q ss_pred hccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEE-cCceeEEEEecCCCC-CcE
Q 008366 177 RGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKI-ANHKFTVVAVDAGYT-DPY 254 (568)
Q Consensus 177 ~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~~-~p~ 254 (568)
. ..+.....++.++|||+. .|.+++++| +|||||+|++....+.|+| +||+|+||+.||.++ +|.
T Consensus 173 ~--~~~~~~~~~d~~liNG~~----------~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~~DG~~~~~P~ 239 (451)
T 2uxt_A 173 N--EPGSGGFVGDTLLVNGVQ----------SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVISGDQGFLPAPV 239 (451)
T ss_dssp C--CCSSSCCCCSEEEETTEE----------SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEECSSSEEEEEE
T ss_pred c--cccCCCCcCCEEEECCcc----------cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEEeCCCccCCce
Confidence 1 122233567899999994 368999999 9999999999999999999 899999999999988 899
Q ss_pred EEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCCcc----ccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcc
Q 008366 255 VTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTI----VAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTA 330 (568)
Q Consensus 255 ~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~----~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~ 330 (568)
.++++.|+||||+||+|+++ .++.|++++.....+.... .........++++|.......+.....|
T Consensus 240 ~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~p-------- 310 (451)
T 2uxt_A 240 SVKQLSLAPGERREILVDMS-NGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTDSLP-------- 310 (451)
T ss_dssp EESSEEECTTCEEEEEEECT-TCCCEEEEC----------------CCCCSCCEEEEEEECSCCC----CCC--------
T ss_pred EeceEEECceeEEEEEEEeC-CCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcCccccCc--------
Confidence 99999999999999999999 4789999987654321100 0011123457788875432111000011
Q ss_pred ccccccCccCCCCCCCCCCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCc
Q 008366 331 YTFYSNITGLSGGPQWVPCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGV 410 (568)
Q Consensus 331 ~~~~~~l~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~ 410 (568)
..|.++... +...+.+..+.+. + .|++||++|..+.
T Consensus 311 ----~~L~~~~~~------~~~~~~~~~~~l~----------------~---~~~iNg~~f~~~~--------------- 346 (451)
T 2uxt_A 311 ----MRLLPTEIM------AGSPIRSRDISLG----------------D---DPGINGQLWDVNR--------------- 346 (451)
T ss_dssp ----SCSSSSCCC------CCCCSEEEEEEEC----------------S---SSSBTTBCCCTTC---------------
T ss_pred ----cccCCCCCC------CCCCcceEEEEEe----------------e---EEEECCEeCCCCC---------------
Confidence 112222110 1112222222221 1 4788988774332
Q ss_pred ccCCCCCCCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCC
Q 008366 411 YEPNFPNQPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNA 490 (568)
Q Consensus 411 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~ 490 (568)
..+.++.|++|+|+|+|. +.||||||||+|+||+++.
T Consensus 347 ---------------------------------~~~~~~~G~~~~~~l~N~-----~~HP~HLHGh~F~Vl~~~G----- 383 (451)
T 2uxt_A 347 ---------------------------------IDVTAQQGTWERWTVRAD-----EPQAFHIEGVMFQIRNVNG----- 383 (451)
T ss_dssp ---------------------------------CCEEEETTCEEEEEEEEE-----EEEEEEETTCEEEEEEETT-----
T ss_pred ---------------------------------CcEEcCCCCEEEEEEECC-----CCcCeEECCceEEEEeeCC-----
Confidence 234679999999999995 6799999999999999952
Q ss_pred CCCCCCCcCCCCCceeeEEeCCCcEEEEEEEecCcee----EEEEeecccccccccEEEEEEecCC
Q 008366 491 SRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRANNPGV----WFMHCHFDVHLPWGLATTFIVENGP 552 (568)
Q Consensus 491 ~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~----w~~HCHil~H~d~GM~~~~~V~~~~ 552 (568)
..+++.+|.|||||.| +++++|+|+|||||. |||||||++|+|.|||+.|+|.+.+
T Consensus 384 ----~~~~~~~p~~rDTv~v--g~~~~i~~~~dnpg~~~g~w~~HCHil~H~d~GMm~~~~v~~~~ 443 (451)
T 2uxt_A 384 ----AMPFPEDRGWKDTVWV--DGQVELLVYFGQPSWAHFPFYFNSQTLEMADRGSIGQLLVNPVP 443 (451)
T ss_dssp ----BCCCGGGSSCBSEEEE--EEEEEEEEECCSCCBTTBCEEEEESSHHHHHTTCEEEEEEECSC
T ss_pred ----cCCCcccCCCccEEEE--CCEEEEEEEeCCCCCCCCceEEeCCchhHHhCCCcEEEEEccCc
Confidence 3356678999999999 899999999999988 9999999999999999999998643
No 11
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=100.00 E-value=1.1e-76 Score=641.43 Aligned_cols=423 Identities=20% Similarity=0.276 Sum_probs=317.3
Q ss_pred CceEEEEEEEEEEe--eccCceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcc
Q 008366 23 AAVVEHSFQVKNLT--IGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMIT 100 (568)
Q Consensus 23 ~~~~~~~~~~~~~~--~~~~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~ 100 (568)
..+++|+|++++.. +.++|+.+.+|+|||++|||+||+++||+|+|+|+|+++++++|||||+++.. ++||++
T Consensus 34 ~~~~~~~l~~~~~~~~~~p~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~~--~~DG~~--- 108 (534)
T 3abg_A 34 QEIWYYEVEIKPFTHQVYPDLGSADLVGYDGMSPGPTFQVPRGVETVVRFINNAEAPNSVHLHGSFSRA--AFDGWA--- 108 (534)
T ss_dssp SCCEEEEEEEECCEECCSTTTCCEECBEETSCSSEEEEEEETTCCEEEEEEECSSSCBCEEEETCCCCT--TTTTCS---
T ss_pred CceEEEEEEEEEEEEEecCCCCceeEEEECCcCcCceEEEeCCcEEEEEEEECCCCCceEEECCCcCCC--CCCCCC---
Confidence 34578999999654 56789999999999999999999999999999999999999999999999875 479974
Q ss_pred cccCCCCCeEEEEEEeCCCCCceeEecChhhhh-----hcceEEEEEecCCCCCCCCCC--CCCceeEEEeecccCcHHH
Q 008366 101 QCPIRPGNSYTYKFRIINQEGTLWWHAHISMLR-----ATVHGAFIIRPKSGHKYPFPK--PDKEVPIVLGEWWNDDIMD 173 (568)
Q Consensus 101 ~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~-----~Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~ 173 (568)
+|+|.||++++|+|++.+++||||||||.++++ .||+|+|||+++.+...+++. .++|++|+++||+.+...+
T Consensus 109 ~~~i~PG~~~~Y~f~~~~~~GT~WYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~~lp~~~~~~d~~l~l~d~~~~~~g~ 188 (534)
T 3abg_A 109 EDITEPGSFKDYYYPNRQSARTLWYHDHAMHITAENAYRGQAGLYMLTDPAEDALNLPSGYGEFDIPMILTSKQYTANGN 188 (534)
T ss_dssp SSCBSSCSCCCEEECCCSSSCEEEEEECCTTCHHHHHHTBCEEEEEEECTTTTTSCTTCCHHHHSCCEEEEEECBCSSSC
T ss_pred CCCCCCCCeEEEEEecCCcceeEEEecCccccchhhhhhcceEEEEEECCcccccCCCccCCcceEEEEEeeeeecCCCc
Confidence 799999999999999855579999999998643 299999999998766555543 2678999999998765432
Q ss_pred HHhhccccC-CCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcC-------ceeEEEE
Q 008366 174 VANRGEITG-VGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIAN-------HKFTVVA 245 (568)
Q Consensus 174 ~~~~~~~~g-~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~g-------h~~~via 245 (568)
+... .+ .....+|.++|||+.+ +.+++++ ++|||||||++....+.|+|++ |+|+||+
T Consensus 189 ~~~~---~~~~~~~~gd~~lvNG~~~----------p~~~v~~-~~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa 254 (534)
T 3abg_A 189 LVTT---NGELNSFWGDVIHVNGQPW----------PFKNVEP-RKYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA 254 (534)
T ss_dssp BCCC---TTCSSCCCCSEEEETTEES----------CBCBCCS-SEEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE
T ss_pred eecc---CCCCccccCceeccCCccC----------ceEEecC-cEEEEEEEecCCcceEEEEEecccCcCCCccEEEEE
Confidence 2211 11 1223578999999954 5688888 5899999999999999999987 9999999
Q ss_pred ecCCCC-CcEEEeEEEECCCceEEEEEEeCCCCc-eeEEEEeeccC-CCCccccCCCcceEEEEEEcCCCCCCCCCCCCC
Q 008366 246 VDAGYT-DPYVTDVVVIAPGQTTDVLLKADQPVG-SYYMAARAYAA-PPPTIVAFDNTTTRGIVVYDGASTANPIMPALP 322 (568)
Q Consensus 246 ~DG~~~-~p~~~d~~~l~pg~r~dv~~~~~~~~g-~y~~~~~~~~~-~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~ 322 (568)
.||.++ +|+.++++.|+||||+||+|++++.+| +|+|+...... +... ........++++|....... .+.
T Consensus 255 ~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~l~~~~~~~~~~~~--~~~~~~~~~il~~~~~~~~~--~~~-- 328 (534)
T 3abg_A 255 SDSGLLEHPADTSLLYISMAERYEVVFDFSDYAGKTIELRNLGGSIGGIGT--DTDYDNTDKVMRFVVADDTT--QPD-- 328 (534)
T ss_dssp ETTEEEEEEEEESCEEECTTCEEEEEEECSSCTTSEEEEECCCCSSSSCCS--CSSSTTTSEEEEEECCCCSS--CSC--
T ss_pred eCCCcccCceEeceEEECCccEEEEEEEcCCCCCceEEEEecccccccccc--ccCcCCcceeEEEecCCCCc--CCC--
Confidence 999865 899999999999999999999997677 69998754221 1110 11112345778886543210 000
Q ss_pred CCCCCCccccccccCccCCCCCCCCCCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhh
Q 008366 323 AYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQA 402 (568)
Q Consensus 323 ~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~ 402 (568)
.. .....++.+.. +. .+...++++. +.. . ...|++||++|..+. .+
T Consensus 329 ----~~---~~P~~L~~~~~---p~-~~~~~~~~~~--~~~--------------~--~~~w~iNG~~f~~~~-~p---- 374 (534)
T 3abg_A 329 ----TS---VVPANLRDVPF---PS-PTTNTPRQFR--FGR--------------T--GPTWTINGVAFADVQ-NR---- 374 (534)
T ss_dssp ----CC---CCCCCCCCCSC---CC-CCCCCCEEEE--CSC--------------C--CSTTCCCCBTTBCTT-SC----
T ss_pred ----CC---CCccccccCCC---CC-CccccceEEE--Eec--------------c--CceeEECCcccCCCC-Cc----
Confidence 00 00011222110 11 1122333332 111 0 125889999885432 00
Q ss_pred hhhcCCCcccCCCCCCCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEE
Q 008366 403 YFFNVGGVYEPNFPNQPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLA 482 (568)
Q Consensus 403 ~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~ 482 (568)
....++.|++++|+|+|.+. .+.||||||||+|+||+
T Consensus 375 -----------------------------------------~l~~v~~G~~~~w~i~N~~~--~~~HP~HLHG~~F~Vl~ 411 (534)
T 3abg_A 375 -----------------------------------------LLANVPVGTVERWELINAGN--GWTHPIHIHLVDFKVIS 411 (534)
T ss_dssp -----------------------------------------CCCEECTTCEEEEEEEECSS--SCCCCEEESSCCEEEEE
T ss_pred -----------------------------------------ceeeccCCCEEEEEEEcCCC--CCCcCEEECCeeEEEEE
Confidence 11257889999999999752 36999999999999999
Q ss_pred eCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEE-ecCceeEEEEeecccccccccEEEEEEecCC
Q 008366 483 QGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFR-ANNPGVWFMHCHFDVHLPWGLATTFIVENGP 552 (568)
Q Consensus 483 ~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~-adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 552 (568)
++.|.+. ....++.+ .|||||.|+|+++++|||+ +||||.|+|||||++|++.|||+.|.|...+
T Consensus 412 ~~~g~~~----~~~~~~~~-~~rDTV~v~pg~~v~I~~~~adnpG~w~~HCHil~H~d~GMm~~~~V~~~~ 477 (534)
T 3abg_A 412 RTSGNNA----RTVMPYES-GLKDVVWLGRRETVVVEAHYAPFPGVYMFHCHNLIHEDHDMMAAFNATVLP 477 (534)
T ss_dssp ESSCCSS----SCCCSGGG-SCBSEECCCSSEEEEEEEECCSCCEEEEEEESCHHHHHTTCEEEEEECSSC
T ss_pred EcCCCCc----CcCCcccc-CCcCeEEcCCCCEEEEEEEECCCCccEEEecChHHHHhcCCceEEEEEecc
Confidence 9765432 12344556 8999999999999999999 8999999999999999999999999998765
No 12
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=100.00 E-value=4.7e-76 Score=625.82 Aligned_cols=420 Identities=22% Similarity=0.319 Sum_probs=309.4
Q ss_pred cCCceEEEEEEEEEEeecc-CceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCc
Q 008366 21 ASAAVVEHSFQVKNLTIGR-LCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMI 99 (568)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~-~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~ 99 (568)
..+.+++|+|++++..++. +|+.+.+|+|||++|||+||+++||+|+|+|+|.|+++++|||||+++. +++||++
T Consensus 46 ~~~~~~~~~L~~~~~~~~~~~G~~~~~~~~NG~~PGPtIr~~~Gd~v~v~v~N~l~~~tsiHwHGl~~~--~~~DG~p-- 121 (481)
T 3zx1_A 46 KEKNIFHATLEIKENHIELIKGKKTLFYTYNGLVPAPKIEVFEGDKLEILVKNKLKEATTIHWHGVPVP--PDQDGSP-- 121 (481)
T ss_dssp CSTTEEEEEEEEEEEEECCSTTCCEEEEEETTBSSCCBEEEETTCEEEEEEEECSSSCBCCEEETCCCC--GGGSCCT--
T ss_pred cCCCeEEEEEEEEEEEEEccCCcEEEEEEECCCCCCceEEEECCcEEEEEEEeCCCCCeeEEecCcccC--CccCCCc--
Confidence 3678899999999999987 5999999999999999999999999999999999999999999999985 4579986
Q ss_pred ccccCCCCCeEEEEEEeCCC-CCceeEecChhh----hhh-cceEEEEEecCCCCCCCCCCCCCceeEEEeecccCcHHH
Q 008366 100 TQCPIRPGNSYTYKFRIINQ-EGTLWWHAHISM----LRA-TVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMD 173 (568)
Q Consensus 100 ~~~~i~PG~~~~y~f~~~~~-~Gt~~YH~h~~~----~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 173 (568)
||+|.||++++|+|+++++ +||||||||.++ +.. ||+|+|||+++.+...++ ++++ ++++||+.+...+
T Consensus 122 -q~~I~PG~s~~Y~f~~~~~~~GT~WYH~H~~~~t~~q~~~GL~G~lIV~~~~~~~~~~---~~~~-l~l~D~~~~~~g~ 196 (481)
T 3zx1_A 122 -HDPILAGEERIYRFEIPQDSAGTYWYHPHPHYTASKQVFMGLAGAFVIKAKKDALSHL---KEKD-LMISDLRLDENAQ 196 (481)
T ss_dssp -TSCBCTTCEEEEEEECCTTCCEEEEEECCCTTTHHHHHHTTCCEEEEEECSSCTTTTS---EEEE-EEEEEECCBTTSC
T ss_pred -cCcCCCCCeEEEEEeCCCCCCceEEEeecCCCcchhhhhccceEEEEEcCccccccCC---Ccee-EEEEEEeccCCCc
Confidence 8999999999999999433 799999999854 333 999999999987654322 3455 8999999875432
Q ss_pred HHhhccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCC-C
Q 008366 174 VANRGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT-D 252 (568)
Q Consensus 174 ~~~~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-~ 252 (568)
+.............++.++|||+. .|.+++++|+ ||||+|++..+.+.|+|+||+|+||+.||.++ +
T Consensus 197 ~~~~~~~~~~~g~~gd~~lvNG~~----------~p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa~DGg~~~~ 264 (481)
T 3zx1_A 197 IPNNNLNDWLNGREGEFVLINGQF----------KPKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVGTDGGLIEK 264 (481)
T ss_dssp CCCCCHHHHHHCCCCSEEEETTEE----------SCEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEEETTEEEEE
T ss_pred cccccchhhccCCcCCEEEECCcc----------CceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEEcCCCccCC
Confidence 210000000011346899999994 3799999998 99999999999999999999999999998876 8
Q ss_pred cEEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCcccc
Q 008366 253 PYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYT 332 (568)
Q Consensus 253 p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~ 332 (568)
|+.++++.|+||||+||+|+++ +++.|.+.+...................+.+++.+.. ..+|.
T Consensus 265 P~~~~~l~l~pgeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~~lP~------------ 328 (481)
T 3zx1_A 265 TIYKEELFLSPASRVEVLIDAP-KDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKEN---VELPK------------ 328 (481)
T ss_dssp EEEESSEEECTTCEEEEEEECS-SCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCC---CCCCS------------
T ss_pred ceEeCeEEECCccEEEEEEEcC-CCcEEEEEEecccccCccccCCCCceeEEEEecCCCC---ccCCc------------
Confidence 9999999999999999999999 5788999886544321111111222344455554411 12221
Q ss_pred ccccCccCCCCCCCCCCCCCCceEEEEEEccCcccCCCCCcccCCCCCc------eeeeecCcceeCCCchhhhhhhhhc
Q 008366 333 FYSNITGLSGGPQWVPCPRRVDERMFVTVGLGLEQCPANATCQGPFSQR------LSASMNNHSFQAPTSLSILQAYFFN 406 (568)
Q Consensus 333 ~~~~l~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~n~~s~~~p~~~~ll~~~~~~ 406 (568)
.+..+. . ....+.+..+.+........ ......... ..|++||..|...
T Consensus 329 ---~l~~~~-----~--~~~~~~~r~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~iNG~~~~~~------------ 383 (481)
T 3zx1_A 329 ---NLKIFK-----P--SEEPKEFKEIIMSEDHMQMH---GMMGKSEGELKIALASMFLINRKSYDLK------------ 383 (481)
T ss_dssp ---CSCCCC-----C--CCCCCEEEEEEEEECCSTTT---TGGGCCHHHHHHHHHTTEEETTBCCCTT------------
T ss_pred ---cccCCC-----C--CCCCCcEEEEEEeccchhcc---cccccccccccccccceeEECCEeCCCC------------
Confidence 011110 0 00111233333322111000 000000000 1377887665211
Q ss_pred CCCcccCCCCCCCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeC-C
Q 008366 407 VGGVYEPNFPNQPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQG-F 485 (568)
Q Consensus 407 ~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~-~ 485 (568)
.+.+.++.|++|+|+|.|.+. +.||||||||.|+|++++ .
T Consensus 384 ------------------------------------~~~~~~~~G~~v~w~l~N~~~---~~Hp~HlHG~~F~vl~~~~~ 424 (481)
T 3zx1_A 384 ------------------------------------RIDLSSKLGVVEDWIVINKSH---MDHPFHIHGTQFELISSKLN 424 (481)
T ss_dssp ------------------------------------CCCEEEETTCCEEEEEEECSS---SCEEEEETTCCEEEEEEEET
T ss_pred ------------------------------------CceEEeCCCCEEEEEEEcCCC---CceeEEEeccEEEEEEeccc
Confidence 144578999999999999665 999999999999999983 1
Q ss_pred CCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEe
Q 008366 486 GNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 486 g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
| .......+.|||||.|+|+++++|+|+|||||.|+||||+++|+|.|||..|+|+
T Consensus 425 g--------~~~~~~~~~~kDTv~v~Pg~~~~i~~~~d~pG~w~~HCHil~H~d~GMm~~~~V~ 480 (481)
T 3zx1_A 425 G--------KVQKAEFRALRDTINVRPNEELRLRMKQDFKGLRMYHCHILEHEDLGMMGNLEVK 480 (481)
T ss_dssp T--------EEEECSSCCEESEEEECTTCEEEEEECCCSCEEEEEEESSHHHHHTTCEEEEEEE
T ss_pred C--------CCCCcccCcccceEEECCCCEEEEEEEcCCCeeEEEEcCChHHHhcCCceEEEEe
Confidence 1 1112235789999999999999999999999999999999999999999999997
No 13
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=100.00 E-value=6.2e-76 Score=635.42 Aligned_cols=429 Identities=19% Similarity=0.227 Sum_probs=312.8
Q ss_pred eEEEEEEEEEEeecc--CceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCC----------------------CeeE
Q 008366 25 VVEHSFQVKNLTIGR--LCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPY----------------------NITI 80 (568)
Q Consensus 25 ~~~~~~~~~~~~~~~--~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~----------------------~~~i 80 (568)
..+|+|++++..... ++..+.+|+|||++|||+||+++||+|+|+|+|+|++ +++|
T Consensus 25 ~~~~~l~~~~~~~~~~~~~~~~~~~~~NG~~PGPtI~~~~Gd~v~v~v~N~L~~~~~~~~~~t~~~~~~~~~~~~~~tsi 104 (513)
T 2wsd_A 25 KTYYEVTMEECTHQLHRDLPPTRLWGYNGLFPGPTIEVKRNENVYVKWMNNLPSTHFLPIDHTIHHSDSQHEEPEVKTVV 104 (513)
T ss_dssp CEEEEEEEEEEEECSSTTSCCEEEEEETTBSSCCBEEEETTCCEEEEEEECCCSSCSSCCCTTSCC-----CCCSCCBCE
T ss_pred ceEEEEEEEEeeeeeCCCCCCceEEEECCCccCceEEECCCCEEEEEEEeCCCccccCccccccccccccccCCCCCcEE
Confidence 455999999988654 4579999999999999999999999999999999975 8999
Q ss_pred EEccccccCCCCCCCCCC--cccccCCCCCe---EEEEEEeCCCCCceeEecChhhh----hh-cceEEEEEecCCCCCC
Q 008366 81 HWHGIFQIRSIWADGPNM--ITQCPIRPGNS---YTYKFRIINQEGTLWWHAHISML----RA-TVHGAFIIRPKSGHKY 150 (568)
Q Consensus 81 H~HG~~~~~~~~~DG~~~--~~~~~i~PG~~---~~y~f~~~~~~Gt~~YH~h~~~~----~~-Gl~G~liV~~~~~~~~ 150 (568)
||||+++.+ ++||+++ +++|+|+||++ ++|+|++.+++||||||||.++. .. ||+|+|||+++.+...
T Consensus 105 HwHGl~~~~--~~DG~p~~~i~~g~i~pG~~f~~~~Y~f~~~~~~GT~wYH~H~~~~t~~q~~~Gl~G~liV~~~~~~~~ 182 (513)
T 2wsd_A 105 HLHGGVTPD--DSDGYPEAWFSKDFEQTGPYFKREVYHYPNQQRGAILWYHDHAMALTRLNVYAGLVGAYIIHDPKEKRL 182 (513)
T ss_dssp EEETCCCCG--GGSCCTTSCBCGGGSSBCTTCCCSEEEECCCSCCEEEEEEECCTTTHHHHHHHTCEEEEEEECGGGGGG
T ss_pred EcCCCcCCC--ccCCCCcccccCCcccCCCccceEEEEEecCCCccceEECCCCCCcchhhhhccCeEEEEEeccccccc
Confidence 999999875 4699996 78999999955 59999985689999999999763 22 9999999999876555
Q ss_pred CCCCCCCceeEEEeecccCcHHHHHhhcc----------ccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEE
Q 008366 151 PFPKPDKEVPIVLGEWWNDDIMDVANRGE----------ITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYL 220 (568)
Q Consensus 151 ~~~~~~~e~~l~~~d~~~~~~~~~~~~~~----------~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~r 220 (568)
+++.+++|++|+++||+.+...++..... ........++.++|||+.+ +.+++++| +||
T Consensus 183 ~lp~~d~d~~l~l~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~liNG~~~----------p~~~v~~~-~~R 251 (513)
T 2wsd_A 183 KLPSDEYDVPLLITDRTINEDGSLFYPSAPENPSPSLPNPSIVPAFCGETILVNGKVW----------PYLEVEPR-KYR 251 (513)
T ss_dssp CCCCGGGEEEEEEEEEEECTTSCEECCSSCSSCCTTSCSSCCCSCCCCSEEEETTEES----------CEEECCSS-EEE
T ss_pred cCCCCCCcEEEEEEeeecCCCCceecccccccccccccccccccccccceEEECCccc----------ceEEecCC-EEE
Confidence 56667899999999998776433221110 0011234578999999943 67899885 899
Q ss_pred EEEEeccCCCeEEEEEcCc-eeEEEEecCCCC-CcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCCccccCC
Q 008366 221 LRIINAALNNQLFFKIANH-KFTVVAVDAGYT-DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFD 298 (568)
Q Consensus 221 lRliN~~~~~~~~~~i~gh-~~~via~DG~~~-~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~ 298 (568)
|||||++....+.|+|+|| +|+||+.||.++ +|+.++++.|+||||+||+|++++.+|++.. ......+.. .+.
T Consensus 252 lRliNa~~~~~~~~~i~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~~~~~~g~~~~-l~~~~~~~~---~~~ 327 (513)
T 2wsd_A 252 FRVINASNTRTYNLSLDNGGDFIQIGSDGGLLPRSVKLNSFSLAPAERYDIIIDFTAYEGESII-LANSAGCGG---DVN 327 (513)
T ss_dssp EEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEEEEESEEEECTTCEEEEEEECGGGTTCEEE-EEECCCSSS---SCC
T ss_pred EEEEccCCcceEEEEECCCCeEEEEccCCCcccCceEeCeEEECCeeeEEEEEECCCCCCcEEE-EEecccccc---cCC
Confidence 9999999999999999999 999999999998 8999999999999999999999976787433 222222211 111
Q ss_pred CcceEEEEEEcCCCC-CCCCCCCCCCCCCCCccccccccCccCCCCCCCCCCCCCCceEEEEEEccCcccCCCCCcccCC
Q 008366 299 NTTTRGIVVYDGAST-ANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERMFVTVGLGLEQCPANATCQGP 377 (568)
Q Consensus 299 ~~~~~ail~y~~~~~-~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~ 377 (568)
.....++++|..... ..+.....|. .+..+. ..+. .+...++++.+...+.
T Consensus 328 ~~~~~~il~~~~~~~~~~~~~~~~p~------------~l~~~~--~~~~-~~~~~~~~~~l~~~~~------------- 379 (513)
T 2wsd_A 328 PETDANIMQFRVTKPLAQKDESRKPK------------YLASYP--SVQH-ERIQNIRTLKLAGTQD------------- 379 (513)
T ss_dssp TTTTTEEEEEECCSCCSSCCCCCCCS------------BCSCCG--GGCC-CCEEEEEEEEEEEEEC-------------
T ss_pred CCCCcceEEEEeccCcccCccCCCCc------------cccCCC--Cccc-CCCcceEEEEEEeecC-------------
Confidence 123456788875432 1000000110 011100 0000 0112233443333211
Q ss_pred CCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCCCCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEE
Q 008366 378 FSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPNQPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMV 457 (568)
Q Consensus 378 ~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~ 457 (568)
......|.+||++|..+. .+.++.|++|+|+
T Consensus 380 ~~g~~~~~iNg~~~~~~~-------------------------------------------------~~~~~~g~~~~w~ 410 (513)
T 2wsd_A 380 EYGRPVLLLNNKRWHDPV-------------------------------------------------TETPKVGTTEIWS 410 (513)
T ss_dssp TTSCEEEEETTBCTTSCC-------------------------------------------------CBCCBTTCEEEEE
T ss_pred CCCCceEeECCccCCCcc-------------------------------------------------cEecCCCCEEEEE
Confidence 112346789988763321 1246789999999
Q ss_pred EEeCCcCCCCCCceeecCCcEEEEEeCCC---CCCCCCC------CCCCcCCCCCceeeEEeCCCcEEEEEEEe-cCcee
Q 008366 458 LQNTALIAVESHPMHLHGYDFYVLAQGFG---NYNASRD------SKNFNLVNPQRRNTIAVPIGGWAVIRFRA-NNPGV 527 (568)
Q Consensus 458 l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g---~~~~~~~------~~~~~~~~p~~rDTv~vp~~g~~~irf~a-dnpG~ 527 (568)
|+|.+. +.||||||||+||||+++.. .|++... ........+.|||||.|+++++++|+|++ ||||.
T Consensus 411 l~N~~~---~~HP~HlHG~~F~Vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~ 487 (513)
T 2wsd_A 411 IINPTR---GTHPIHLHLVSFRVLDRRPFDIARYQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGR 487 (513)
T ss_dssp EEECSS---SCEEEEESSCCEEEEEEEEBCHHHHHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEE
T ss_pred EEcCCC---CCcCEeEeCceEEEEEecCcccccccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCC
Confidence 999765 89999999999999998642 2322100 00112223469999999999999999999 78999
Q ss_pred EEEEeecccccccccEEEEEEec
Q 008366 528 WFMHCHFDVHLPWGLATTFIVEN 550 (568)
Q Consensus 528 w~~HCHil~H~d~GM~~~~~V~~ 550 (568)
|+|||||++|++.|||+.|+|.+
T Consensus 488 w~~HCHil~H~~~GMm~~~~V~~ 510 (513)
T 2wsd_A 488 YVWHCHALEHEDYDMMRPMDITD 510 (513)
T ss_dssp EEEEESCHHHHTTTCEEEEEEBC
T ss_pred EEEEcCChhhhhcCCceeEEEeC
Confidence 99999999999999999999975
No 14
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=100.00 E-value=6.9e-76 Score=623.71 Aligned_cols=390 Identities=19% Similarity=0.313 Sum_probs=294.5
Q ss_pred EEECCC-CCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeE
Q 008366 47 TAVNGS-LPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWW 125 (568)
Q Consensus 47 ~~~NG~-~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~Y 125 (568)
|+|||+ +|||+||+++||+|+|+|+|.|+++++|||||+++.. ++||+++ |+|.||++++|+|++++++|||||
T Consensus 28 ~~~Ng~~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~~~---~~i~PG~~~~Y~f~~~~~~GT~wY 102 (448)
T 3aw5_A 28 SGYMAEGVLNPTIILRRGQRVDMTLKNKLTEPTIVHWHGFDVNW--HNDAHPS---FAITPGESYNYSFDVVNRAGTYLY 102 (448)
T ss_dssp TEEEETTEESCEEEEETTCEEEEEEEECSSSCBCEEEETCCCCH--HHHTCGG---GCBCTTCEEEEEEECCSCSEEEEE
T ss_pred EEECCccccCceEEEeCCCEEEEEEEECCCCceeEEeCCccCCC--ccCCCCC---ccCCCCCEEEEEEEcCCCCCceEe
Confidence 999999 9999999999999999999999999999999999864 4799987 999999999999999448999999
Q ss_pred ecChh----hhhh-cceEEEEEecCCCCCCCCCCCC-CceeEEEeecccCcHHHHHhhc-cccCCCCCCCceEEEcCCCC
Q 008366 126 HAHIS----MLRA-TVHGAFIIRPKSGHKYPFPKPD-KEVPIVLGEWWNDDIMDVANRG-EITGVGPRISDAFTINGMPG 198 (568)
Q Consensus 126 H~h~~----~~~~-Gl~G~liV~~~~~~~~~~~~~~-~e~~l~~~d~~~~~~~~~~~~~-~~~g~~~~~~~~~~iNG~~g 198 (568)
|||.+ .+.. ||+|+|||+++... .+++ ++ +|++|+++||+++. .++.... ...+.....++.++|||+.
T Consensus 103 H~H~~~~~~~q~~~Gl~G~liV~~~~~~-~~l~-~d~~e~~l~l~D~~~~~-~~~~~~~~~~~~~~~~~~~~~liNG~~- 178 (448)
T 3aw5_A 103 HPHPHGLTAKQFYMGQLGLVIVEDSGSD-LGFK-YGVNDLPLVISDRRFIG-GAPVYNPTPMEMIAGFLGNAVLVNGVK- 178 (448)
T ss_dssp EECCTTTHHHHHHTTCCEEEEEECTTTT-TTCC-BTTTEEEEEEEEEEEET-TEEECCCCHHHHHHCCCCSEEEETTEE-
T ss_pred ccCCCCchHHHHhccceEEEEEeCCccc-cCCC-CCCceEEEEEEeeccCC-CcccccccccccccCccccEEEECCcc-
Confidence 99944 4444 99999999998765 3333 45 89999999999876 4322100 0000112357899999994
Q ss_pred CCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEE--cC---ceeEEEEecCCCCC-cEEEeEEEECCCceEEEEEE
Q 008366 199 DLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKI--AN---HKFTVVAVDAGYTD-PYVTDVVVIAPGQTTDVLLK 272 (568)
Q Consensus 199 ~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i--~g---h~~~via~DG~~~~-p~~~d~~~l~pg~r~dv~~~ 272 (568)
.+.+++++| +|||||+|++....+.|+| +| |+|+||+.||.+++ |..++++.|+||||+||+|+
T Consensus 179 ---------~p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via~DG~~~~~P~~~~~l~l~pgeR~dvlv~ 248 (448)
T 3aw5_A 179 ---------DAVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIAVDQGFLARPIEVRALFLAPAERAEVVVE 248 (448)
T ss_dssp ---------TCEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEEETTEEEEEEEEESCEEECTTCEEEEEEE
T ss_pred ---------cceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEEeCCCccCCceEeceEEECCcceEEEEEE
Confidence 378999999 9999999999999999999 99 99999999999996 99999999999999999999
Q ss_pred eCCCCceeEEEEeeccCCCCc---c----ccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccCccCCCCCC
Q 008366 273 ADQPVGSYYMAARAYAAPPPT---I----VAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQ 345 (568)
Q Consensus 273 ~~~~~g~y~~~~~~~~~~~~~---~----~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~ 345 (568)
++ .+.|++++.....+... . .........++++|++....+. | . .|..+..
T Consensus 249 ~~--~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p---~------------~L~~lp~--- 306 (448)
T 3aw5_A 249 LG--EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVP--V---E------------ALSDPPP--- 306 (448)
T ss_dssp EC--SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCC--C---C------------CCSCCCC---
T ss_pred CC--CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCC--c---c------------ccCCCCC---
Confidence 98 37899998866542110 0 0112234678888876433111 1 0 0111110
Q ss_pred CCCCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCCCCCccccc
Q 008366 346 WVPCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPNQPPVEFDY 425 (568)
Q Consensus 346 ~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~ 425 (568)
...+...++++.+..+ ...|++||++|..+.
T Consensus 307 -~~~~~~~~~~~~l~~~------------------~~~~~iNg~~~~~~~------------------------------ 337 (448)
T 3aw5_A 307 -EPPKPTRTRRFALSLS------------------GMQWTINGMFWNASN------------------------------ 337 (448)
T ss_dssp -CCCCCSEEEEEEEEEE------------------TTEEEETTBCCCTTC------------------------------
T ss_pred -CCCCCCceEEEEEeCC------------------CceeeECCCcCCCCC------------------------------
Confidence 0112233444443321 125999999874332
Q ss_pred CCCCCCCCccccCCCCCceEEE-cccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCC----cCC
Q 008366 426 TNTNVSNDMSLLFPPKTTSVKM-LKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNF----NLV 500 (568)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~-~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~----~~~ 500 (568)
+.+. ++.|++|+|+|+|.+. .+.||||||||+||||+++ |.+........+ +..
T Consensus 338 ------------------p~~~~~~~g~~v~~~i~N~~~--~~~HP~HLHG~~F~Vl~~~-G~~~~~~~~~~~~~~~~p~ 396 (448)
T 3aw5_A 338 ------------------PLFEHVSVEGVELWEIVNDKA--SMPHPMHLHGFPMWIIERK-DSPRQVAELAVDNRGRLPT 396 (448)
T ss_dssp ------------------TTCCCEEECEEEEEEEEECSS--SCCEEEEESSSCBEEEEEE-SCCHHHHTTCCSTTCCCGG
T ss_pred ------------------CceeccCCCCeEEEEEEcCCC--CCCcCEEECCceEEEEEec-CCCcccccccccccCCCcc
Confidence 1123 6789999999999761 3899999999999999984 433311111222 233
Q ss_pred CCCceeeEEeCCCcEEEEE--EE---ecCceeEEEEeecccccccccEEEEEEe
Q 008366 501 NPQRRNTIAVPIGGWAVIR--FR---ANNPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 501 ~p~~rDTv~vp~~g~~~ir--f~---adnpG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
++.|||||.|+|+++++|+ |+ +||| |+|||||++|++.|||+.|+|+
T Consensus 397 ~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~GMm~~~~V~ 448 (448)
T 3aw5_A 397 DLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDGGMMINIAVK 448 (448)
T ss_dssp GGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHTTCEEEEEEC
T ss_pred ccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhCCCceEEEeC
Confidence 4579999999999999666 88 8899 9999999999999999999984
No 15
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=100.00 E-value=1.9e-74 Score=641.30 Aligned_cols=470 Identities=18% Similarity=0.196 Sum_probs=303.8
Q ss_pred CceEEEEEEEEEEeecc--CceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCC-----------------------
Q 008366 23 AAVVEHSFQVKNLTIGR--LCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYN----------------------- 77 (568)
Q Consensus 23 ~~~~~~~~~~~~~~~~~--~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~----------------------- 77 (568)
..++.|++++++...+. ++....+|+|||++|||+|+|++||+|+|+|+|+|+++
T Consensus 30 ~~~~~~~i~~~~~~~~~~~~~~~t~~~gyNg~~PGPti~~~~Gd~v~v~~~N~L~~~~~~h~hg~~~~~~~~~~~~~~~~ 109 (612)
T 3gyr_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCcceEEEEEEEEEEeecCCCCcceEEEECCcccCcEEEEeCCcEEEEEEEECCCCCcccccccccccCCCCCCcccccc
Confidence 34567888887777654 56778999999999999999999999999999998654
Q ss_pred ------------------eeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecChhhhh----h-
Q 008366 78 ------------------ITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLR----A- 134 (568)
Q Consensus 78 ------------------~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~----~- 134 (568)
++|||||+++.. ++||++ ||+|.||++|+|+|++.+++||||||+|.++.+ .
T Consensus 110 ~~~~~~~~~~~~~~~~~~ttiHwHGl~~~~--~~DGv~---q~~I~PG~~~~Y~f~~~q~~GT~WYHsH~~g~t~~q~~~ 184 (612)
T 3gyr_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGG--GNDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCT--TTSCCG---GGCBCTTCEEEEEECCCSCSEEEEEEECCTTTHHHHTTT
T ss_pred ccccccccccccccCCCCceEEcCCCccCC--cccCcc---cCccCCCCCEEEEEEcCCCCceEEEeeCCCCcchhhhhc
Confidence 678888888754 468864 899999999999999856679999999986533 2
Q ss_pred cceEEEEEecCCCCCCCCCCCCCceeEEEeecccCcHHHHHhhcc--------c-----c---CCCCCCCceEEEcCCCC
Q 008366 135 TVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRGE--------I-----T---GVGPRISDAFTINGMPG 198 (568)
Q Consensus 135 Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~~--------~-----~---g~~~~~~~~~~iNG~~g 198 (568)
||+|+|||+++.+...+++.+++|++|+|+||+++...+...... . . .......+.+++||+.
T Consensus 185 Gl~G~liI~d~~~~~~~~p~~d~e~~lvl~Dw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gd~~~vNG~~- 263 (612)
T 3gyr_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRI- 263 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEE-
T ss_pred cceeEEEEcCccccccCCCCCCccEEEEEEEEecccccccccccccccCCccccccCCCCCCccccCccCceeeecCCc-
Confidence 999999999887766677778899999999998764322211100 0 0 0112346789999994
Q ss_pred CCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCc-------eeEEEEecCCCC-CcEEE------eEEEECCC
Q 008366 199 DLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANH-------KFTVVAVDAGYT-DPYVT------DVVVIAPG 264 (568)
Q Consensus 199 ~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~~-~p~~~------d~~~l~pg 264 (568)
.|.+.++. ++|||||||+++.+.+.|+|++| +|+|||.||.++ +|+.+ ++|.|+||
T Consensus 264 ---------~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa~DG~~l~~Pv~v~~p~~~~~l~i~pG 333 (612)
T 3gyr_A 264 ---------WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp ---------SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred ---------cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEEeCCCccccceeccCcccccEEEeccc
Confidence 36788876 58999999999999999999998 499999999988 56655 47999999
Q ss_pred ceEEEEEEeCCCCceeEEEEeeccCCC-CccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccCccCCCC
Q 008366 265 QTTDVLLKADQPVGSYYMAARAYAAPP-PTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNITGLSGG 343 (568)
Q Consensus 265 ~r~dv~~~~~~~~g~y~~~~~~~~~~~-~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~ 343 (568)
|||||+|++++.+|.++.......... .............++++.............+...... ....
T Consensus 334 eRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~--------~~~~--- 402 (612)
T 3gyr_A 334 ERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGS--------FRRM--- 402 (612)
T ss_dssp CEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSS--------CCCC---
T ss_pred eEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCccccccccccc--------cccc---
Confidence 999999999977676554443322211 1111112223344555543322111001111100000 0000
Q ss_pred CCCCCCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCCCCCccc
Q 008366 344 PQWVPCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPNQPPVEF 423 (568)
Q Consensus 344 ~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~ 423 (568)
.... ............... ........+.++..........+.. +..........+..+
T Consensus 403 --~~~~--~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~ 461 (612)
T 3gyr_A 403 --SHDI--PHGHRLIVLTPPGTK---------GSGGHPEIWEMAEVEDPADVQVPAE--------GVIQVTGADGRTKTY 461 (612)
T ss_dssp --CTTS--CCEEEEEEEECTTCT---------TTTTCCEEEEEEECC-----CCSCT--------TEEEEECTTSCEEEE
T ss_pred --cccc--ccccccccccccccc---------ccccccccccccccccccccccccc--------ceeeeccCCCccccc
Confidence 0000 001111100000000 0001111122111110000000000 000000000000111
Q ss_pred ccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCC------------
Q 008366 424 DYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNAS------------ 491 (568)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~------------ 491 (568)
.... ........+.+++|++|+|+|+|.+. +.||||||||+||||+++.+.++..
T Consensus 462 ~~n~----------~~~~~~~~~~~~~g~~~~w~i~N~~~---~~HP~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~ 528 (612)
T 3gyr_A 462 RRTA----------RTFNDGLGFTIGEGTHEQWTFLNLSP---ILHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVR 528 (612)
T ss_dssp EEEE----------CSTTSCCCEEEETTCEEEEEEEECSS---SCEEEEESSCEEEEEEEEEEECTTEETTTTEESSCEE
T ss_pred cccC----------ccCCCCcceEeCCCCEEEEEEEcCCC---CCcCEeECCCcEEEEeecCCcCccccccccccccccc
Confidence 1111 11223356788999999999999765 8999999999999999864332210
Q ss_pred ---CCCCCCcCCCCCceeeEEeCCCcEEEEEEE-ecCceeEEEEeecccccccccEEEEEEecCCC
Q 008366 492 ---RDSKNFNLVNPQRRNTIAVPIGGWAVIRFR-ANNPGVWFMHCHFDVHLPWGLATTFIVENGPT 553 (568)
Q Consensus 492 ---~~~~~~~~~~p~~rDTv~vp~~g~~~irf~-adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 553 (568)
......+..++.|||||.|+++++++|||+ +||||.|||||||++|||.|||+.|+|.+++.
T Consensus 529 ~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~~rfadnpG~w~~HCHil~Hed~GMM~~f~V~~p~~ 594 (612)
T 3gyr_A 529 LDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGMMRPFVVMPPEA 594 (612)
T ss_dssp EEEEEECCCCTTCSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHHTTCEEEEEEECHHH
T ss_pred cccccccCcccccCCCCcEEEECCCCEEEEEEEeCCCCcceEEcCCChHHHhCcCCcceEEeCCcc
Confidence 011234567788999999999999999999 78999999999999999999999999986543
No 16
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=100.00 E-value=3.9e-74 Score=610.66 Aligned_cols=429 Identities=19% Similarity=0.248 Sum_probs=306.2
Q ss_pred ceEEEEEEEEEEeeccCceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCccccc
Q 008366 24 AVVEHSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCP 103 (568)
Q Consensus 24 ~~~~~~~~~~~~~~~~~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~ 103 (568)
..++|+|++++..++++|+.+.+|+|||++|||+|++++||+|+|+|+|+|+++++|||||+++.. ++||++ ||+
T Consensus 16 ~~~~~~l~~~~~~~~~~G~~~~~~~~NG~~pGP~i~~~~Gd~v~v~~~N~l~~~tsiHwHG~~~~~--~~DG~p---~~~ 90 (488)
T 3od3_A 16 ARNRIQLTIGAGQSTFGGKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHWHGLEVPG--EVDGGP---QGI 90 (488)
T ss_dssp TTSEEEEEEEEEEEEETTEEEEEEEESSSSBCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCCH--HHHCCT---TCC
T ss_pred CCeeEEEEEEEEEEccCCeEEEEEEECCcCCCCeEEEeCCeEEEEEEEeCCcCceeEeecccccCc--ccCCCC---cCc
Confidence 356899999999999999999999999999999999999999999999999999999999999875 469986 799
Q ss_pred CCCCCeEEEEEEeCCCCCceeEecChhhh----hh-cceEEEEEecCCCCCCCCCC--CCCceeEEEeecccCcHHHHHh
Q 008366 104 IRPGNSYTYKFRIINQEGTLWWHAHISML----RA-TVHGAFIIRPKSGHKYPFPK--PDKEVPIVLGEWWNDDIMDVAN 176 (568)
Q Consensus 104 i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~----~~-Gl~G~liV~~~~~~~~~~~~--~~~e~~l~~~d~~~~~~~~~~~ 176 (568)
|.||++++|+|++.+++||||||||.++. .. ||+|+|||+++.+...+++. ..+|++|+++||+.+...++..
T Consensus 91 i~PG~~~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~GL~G~liV~~~~~~~~~lp~~y~~~d~~lvl~D~~~~~~g~~~~ 170 (488)
T 3od3_A 91 IPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLVVIEDDEILKLMLPKQWGIDDVPVIVQDKKFSADGQIDY 170 (488)
T ss_dssp BCTTCEEEEEEECCSCSEEEEEECCCTTTHHHHHHTTCCEEEEEECHHHHTTCCCCCBTTTEEEEEEEEECBCTTSSBCC
T ss_pred CcCCCeEEEEEecCCCceeEEEEecCCCcchhhhhccceeEEEEcCccccccCCcccCCccceeEEEEEeeecCCCceec
Confidence 99999999999984457999999998643 22 99999999987654433332 2468999999999865432211
Q ss_pred hcc-ccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEE-cCceeEEEEecCCCC-Cc
Q 008366 177 RGE-ITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKI-ANHKFTVVAVDAGYT-DP 253 (568)
Q Consensus 177 ~~~-~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i-~gh~~~via~DG~~~-~p 253 (568)
... ........++.++|||+.+ |.+.+ +|++|||||+|+++...+.|+| +||+|+||+.||.++ +|
T Consensus 171 ~~~~~~~~~g~~gd~~lvNG~~~----------p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vIa~DG~~l~~P 239 (488)
T 3od3_A 171 QLDVMTAAVGWFGDTLLTNGAIY----------PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEP 239 (488)
T ss_dssp CCSHHHHHHCCCCSEEEETTBSS----------CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEEEETTEEEEEE
T ss_pred cccccccccCCCCCEEEEcCCcC----------ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEEEeCCCcccCc
Confidence 100 0000123568999999954 45555 5689999999999999999999 699999999999987 89
Q ss_pred EEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccc
Q 008366 254 YVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTF 333 (568)
Q Consensus 254 ~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~ 333 (568)
+.++++.|+|||||||+|+++ ..+.|.+++............+........++...... ...+|..
T Consensus 240 ~~~~~l~l~pGeR~dvlv~~~-~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~P~~------------ 305 (488)
T 3od3_A 240 VKVSELPVLMGERFEVLVEVN-DNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISA-SGALPDT------------ 305 (488)
T ss_dssp EEESCEEECTTCEEEEEEEEC-TTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEEC-CCCCCSC------------
T ss_pred cEeceEEECCCCEEEEEEEeC-CCceEEEEEeccCCCCcccccccCccceeEecccccCC-CCCCCcc------------
Confidence 999999999999999999999 57889998765443222112232222233333321111 1112210
Q ss_pred cccCccCCCCCCCCCCCCCCceEEEEEEccC--------------cccCCC-----------CCccc-CCCCCce----e
Q 008366 334 YSNITGLSGGPQWVPCPRRVDERMFVTVGLG--------------LEQCPA-----------NATCQ-GPFSQRL----S 383 (568)
Q Consensus 334 ~~~l~~~~~~~~~~~~p~~~d~~~~~~~~~~--------------~~~~~~-----------~~~~~-~~~~~~~----~ 383 (568)
|..+.. .+ ..+...++++.+.+... ...... ...+. ...+..+ .
T Consensus 306 ---L~~~~~--~~-~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~ 379 (488)
T 3od3_A 306 ---LSSLPA--LP-SLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHA 379 (488)
T ss_dssp ---CCCCCC--CC-CCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGC
T ss_pred ---cccCCC--Cc-ccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccce
Confidence 111100 00 01112345555543200 000000 00000 0001111 3
Q ss_pred eeecCcceeCCCchhhhhhhhhcCCCcccCCCCCCCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCc
Q 008366 384 ASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPNQPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTAL 463 (568)
Q Consensus 384 ~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~ 463 (568)
|.|||++|.... +.+.++.|++|+|+|.|.+.
T Consensus 380 ~~ING~~~~~~~------------------------------------------------~~~~~~~G~~e~w~l~N~~~ 411 (488)
T 3od3_A 380 NKINGQAFDMNK------------------------------------------------PMFAAAKGQYERWVISGVGD 411 (488)
T ss_dssp EEETTBCCCTTC------------------------------------------------CSEECCBSSCEEEEEECTTC
T ss_pred eeECCeeCCCCC------------------------------------------------CceEcCCCCEEEEEEEeCCC
Confidence 688887663211 33578999999999999762
Q ss_pred CCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec----CceeEEEEeecccccc
Q 008366 464 IAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN----NPGVWFMHCHFDVHLP 539 (568)
Q Consensus 464 ~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad----npG~w~~HCHil~H~d 539 (568)
.+.|||||||++|+|++++. .......+.|||||.|+ +++++|+|+++ +||.||||||+++|||
T Consensus 412 --~~~Hp~HlHg~~F~Vl~~~g---------~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~~~~~~G~~m~HCH~l~Hed 479 (488)
T 3od3_A 412 --MMLHPFHIHGTQFRILSENG---------KPPAAHRAGWKDTVKVE-GNVSEVLVKFNHDAPKEHAYMAHCHLLEHED 479 (488)
T ss_dssp --CCCEEEEETTCCBEEEEBTT---------BCCCGGGSSSBSEEEES-SSEEEEEECBCSCCCGGGCEEEEESSHHHHH
T ss_pred --CCCccEEEcCceEEEeccCC---------CccccccCCceeEEEeC-CCEEEEEEEeccCCCCCCCEEEeCCchHHHh
Confidence 37999999999999999842 22222346799999999 99999999985 4789999999999999
Q ss_pred cccEEEEEE
Q 008366 540 WGLATTFIV 548 (568)
Q Consensus 540 ~GM~~~~~V 548 (568)
.|||..|+|
T Consensus 480 ~GMm~~f~V 488 (488)
T 3od3_A 480 TGMMLGFTV 488 (488)
T ss_dssp TTCEEEEEC
T ss_pred cCCcEEEEC
Confidence 999999986
No 17
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=100.00 E-value=7.4e-72 Score=607.65 Aligned_cols=443 Identities=19% Similarity=0.246 Sum_probs=312.9
Q ss_pred CceEEEEEEEEEEeecc--CceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCC-----------------------
Q 008366 23 AAVVEHSFQVKNLTIGR--LCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYN----------------------- 77 (568)
Q Consensus 23 ~~~~~~~~~~~~~~~~~--~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~----------------------- 77 (568)
...++|+|++++..... ++..+.+|+|||++|||+|++++||+|+|+++|.|++.
T Consensus 30 ~~~~~~~l~~~~~~~~l~~~~~~t~~~~ynG~~PGPtI~~~~Gd~v~V~~~N~L~~~~~~~~~~~~~p~~~~g~p~~~~~ 109 (612)
T 2g23_A 30 EVTRETEIALRPTWVRLHPQLPPTLMWGYDGQVPGPTIEVRRGQRVRIAWTNRIPKGSEYPVTSVEVPLGPPGTPAPNTE 109 (612)
T ss_dssp CTTBCEEEEEEEEEECSCTTSCCEEEEEETTBSSCCEEEEETTCCEEEEEEECCCTTCCCSEEEEEECCCSTTSCCGGGS
T ss_pred CCeEEEEEEEEEEEEEECCCCcceEEEEECCccCCceEEEECCeEeeEEEEECcCCcccccccccccccccCCCcccccc
Confidence 44678999999998764 35689999999999999999999999999999999853
Q ss_pred ------------------eeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecChhhh----hh-
Q 008366 78 ------------------ITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISML----RA- 134 (568)
Q Consensus 78 ------------------~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~----~~- 134 (568)
++|||||+++... +||++ ||+|.||++++|+|++.+++||||||||.++. ..
T Consensus 110 p~~~g~~~~~~~~~~~~~tsiH~HG~~~~~~--~DG~p---~~~i~PG~s~~Y~f~~~~~aGT~wYH~H~~~~t~~q~~~ 184 (612)
T 2g23_A 110 PGRGGVEPNKDVAALPAWSVTHLHGAQTGGG--NDGWA---DNAVGFGDAQLSEYPNDHQATQWWYHDHAMNITRWNVMA 184 (612)
T ss_dssp CSCTTCCCCHHHHTCCCCBCEEEETCCCCTT--TSCCG---GGCBCTTCEEEEEECCCSCSCEEEEEECCTTTHHHHTTT
T ss_pred cccccccccccccccCCceEEEcCCCCCCCc--cCCCC---cCCCCCCCeEEEEEEecCCCceEEEecccCCcchhhhhc
Confidence 8999999998765 59985 79999999999999985589999999999863 22
Q ss_pred cceEEEEEecCCCCCCCCCCCCCceeEEEeecccCcHHH--HHhhc------cc----cCCC----CCCCceEEEcCCCC
Q 008366 135 TVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMD--VANRG------EI----TGVG----PRISDAFTINGMPG 198 (568)
Q Consensus 135 Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~--~~~~~------~~----~g~~----~~~~~~~~iNG~~g 198 (568)
||+|+|||+++.+...+++.+|+|++|+++||+++...+ +..+. .. .+.. ...++.++|||+.+
T Consensus 185 GL~G~liV~~~~~~~~~lp~~d~d~~l~l~Dw~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~p~~~~~~gd~~lVNG~~~ 264 (612)
T 2g23_A 185 GLYGTYLVRDDEEDALGLPSGDREIPLLIADRNLDTDEDGRLNGRLLHKTVIVQQSNPETGKPVSIPFFGPYTTVNGRIW 264 (612)
T ss_dssp TCEEEEEEECHHHHTTTCCCGGGEEEEEEEEECEEECTTSCEEEEEEEEEEEEESSCSSSSCCEECCCCCSEEEETTEES
T ss_pred cceeEEEEcCcccccccCCCCcceEEEEEEEEeccCCcccccccccccccccccccccccCcccccCCcCCEEEECCccC
Confidence 999999999887655566678999999999999864321 10000 00 1111 24578999999943
Q ss_pred CCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCc-------eeEEEEecCCCC-CcEEEe------EEEECCC
Q 008366 199 DLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANH-------KFTVVAVDAGYT-DPYVTD------VVVIAPG 264 (568)
Q Consensus 199 ~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh-------~~~via~DG~~~-~p~~~d------~~~l~pg 264 (568)
|.++|++| +|||||||+++.+.+.|+|++| +|+|||.||.++ +|+.++ +|.|+||
T Consensus 265 ----------p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa~DG~~l~~P~~~~~~~~~~~l~l~pg 333 (612)
T 2g23_A 265 ----------PYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIGSDGGLLPRPVPVDFDDTLPVLSAAPA 333 (612)
T ss_dssp ----------CEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEEETTEEEEEEEEECSSSSSSSEEECTT
T ss_pred ----------CeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEEeCCeEccCCEEecccCcccEEEECCc
Confidence 78999999 9999999999999999999999 899999999999 699999 9999999
Q ss_pred ceEEEEEEeCCCCc-eeEEEEeeccCCCCcc--ccCCCcceEEEEEEcCCCC-CCCCCCCCCCCCCCCccccccccCccC
Q 008366 265 QTTDVLLKADQPVG-SYYMAARAYAAPPPTI--VAFDNTTTRGIVVYDGAST-ANPIMPALPAYNDTPTAYTFYSNITGL 340 (568)
Q Consensus 265 ~r~dv~~~~~~~~g-~y~~~~~~~~~~~~~~--~~~~~~~~~ail~y~~~~~-~~~~~p~~~~~~~~~~~~~~~~~l~~~ 340 (568)
|||||+|++++.+| ++.++........... ...........+++..... .+..+|..... ....+
T Consensus 334 eR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~-----------~~~~l 402 (612)
T 2g23_A 334 ERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSG-----------SFRRM 402 (612)
T ss_dssp CEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCS-----------SCCCC
T ss_pred CeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhcc-----------ccccC
Confidence 99999999997666 5777765421111000 0001112344455554332 11122211000 00000
Q ss_pred CCCCCCCCCCCCCceEEEEEE---ccCcccC-----------------CCCC--cccCCCCCceeeeecCcceeCCCchh
Q 008366 341 SGGPQWVPCPRRVDERMFVTV---GLGLEQC-----------------PANA--TCQGPFSQRLSASMNNHSFQAPTSLS 398 (568)
Q Consensus 341 ~~~~~~~~~p~~~d~~~~~~~---~~~~~~~-----------------~~~~--~~~~~~~~~~~~~~n~~s~~~p~~~~ 398 (568)
. ...+ ..+++.+.. ..+.+.. +... .....++....|.+||+.|.
T Consensus 403 ~-----~~~~--~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~------ 469 (612)
T 2g23_A 403 S-----HDIP--HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFN------ 469 (612)
T ss_dssp C-----TTSC--CEEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTT------
T ss_pred C-----cccc--cceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCC------
Confidence 0 0000 000111100 0000000 0000 00011222234555554431
Q ss_pred hhhhhhhcCCCcccCCCCCCCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcE
Q 008366 399 ILQAYFFNVGGVYEPNFPNQPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDF 478 (568)
Q Consensus 399 ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F 478 (568)
....+.++.|++|+|+|.|.+. +.||||||||.|
T Consensus 470 -------------------------------------------~~~~~~v~~G~~v~w~l~N~~~---~~HPiHlHg~~F 503 (612)
T 2g23_A 470 -------------------------------------------DGLGFTIGEGTHEQWTFLNLSP---ILHPMHIHLADF 503 (612)
T ss_dssp -------------------------------------------SCCCEEEETTCEEEEEEEECSS---SCEEEEESSCCE
T ss_pred -------------------------------------------CCCceEecCCCEEEEEEEeCCC---CCCCeEEcCceE
Confidence 1245678999999999999765 899999999999
Q ss_pred EEEEeCCCC---CCCCCCC------------CCCcCCCCCceeeEEeCCCcEEEEEEEec-CceeEEEEeeccccccccc
Q 008366 479 YVLAQGFGN---YNASRDS------------KNFNLVNPQRRNTIAVPIGGWAVIRFRAN-NPGVWFMHCHFDVHLPWGL 542 (568)
Q Consensus 479 ~Vv~~~~g~---~~~~~~~------------~~~~~~~p~~rDTv~vp~~g~~~irf~ad-npG~w~~HCHil~H~d~GM 542 (568)
+|++++... |+..... ..++..++.|||||.|+|+++++|+|+|+ |||.|||||||++|+|.||
T Consensus 504 ~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~~~~~~pG~w~~HCHil~Hed~GM 583 (612)
T 2g23_A 504 QVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMGKFDGAYGRFMYHCHLLEHEDMGM 583 (612)
T ss_dssp EEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEEECCSCCEEEEEEESSHHHHTTTC
T ss_pred EEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEEEeCCCCccEEEEeCchhHhhcCC
Confidence 999985322 2221111 23445566799999999999999999999 9999999999999999999
Q ss_pred EEEEEEecC
Q 008366 543 ATTFIVENG 551 (568)
Q Consensus 543 ~~~~~V~~~ 551 (568)
|..|+|.+.
T Consensus 584 m~~f~V~p~ 592 (612)
T 2g23_A 584 MRPFVVMPP 592 (612)
T ss_dssp EEEEEEECH
T ss_pred ceEEEECch
Confidence 999999853
No 18
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=100.00 E-value=8.6e-53 Score=426.83 Aligned_cols=272 Identities=27% Similarity=0.418 Sum_probs=228.8
Q ss_pred ceEEEEEEEEEEeecc-CceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccc
Q 008366 24 AVVEHSFQVKNLTIGR-LCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQC 102 (568)
Q Consensus 24 ~~~~~~~~~~~~~~~~-~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~ 102 (568)
++++|+|++++..+++ +|+.+.+|+|||++|||+|++++||+|+|+|+|.++.+++|||||+.+....++||+++++||
T Consensus 1 ~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~~~~DG~p~~t~~ 80 (318)
T 3g5w_A 1 EKREFDLSIEDTRIVLVGKRDFHTFAFNGQVPAPLIHVMEGDDVTVNVTNMTTLPHTIHWHGMLQRGTWQSDGVPHATQH 80 (318)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred CeEEEEEEEEEEEEEcCCCcEEEEEEECCccCCceEEEeCCCEEEEEEEeCCCCceeEEecCcCCCCCcccCCCcccccc
Confidence 4789999999999887 488999999999999999999999999999999999999999999999887789999999999
Q ss_pred cCCCCCeEEEEEEeCCCCCceeEecChhhhh----hcceEEEEEecCCCCCCCCCCCCCceeEEEeecccCcHHHHHhhc
Q 008366 103 PIRPGNSYTYKFRIINQEGTLWWHAHISMLR----ATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRG 178 (568)
Q Consensus 103 ~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~----~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 178 (568)
+|.||++++|+|++ +++||||||||...+. .||+|+|||+++.....+. .+++|++|+++||+..... ..
T Consensus 81 ~i~PG~~~~y~f~~-~~~Gt~wYH~H~~~~~~~~~~Gl~G~lIV~~~~~~~~~~-~~d~e~~l~l~dw~~~~~~----~~ 154 (318)
T 3g5w_A 81 AIEPGDTFTYKFKA-EPAGTMWYHCHVNVNEHVTMRGMWGPLIVEPKNPLPIEK-TVTKDYILMLSDWVSSWAN----KP 154 (318)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHHHHSCCEEEEEEECSSCCHHHH-TCCEEEEEEEEEECGGGTT----CT
T ss_pred cCCCCCEEEEEEEc-CCCEEEEEEccCChhhhhccCCCEEEEEEcCCCcccccc-cccceeEEEEEeecccccc----cc
Confidence 99999999999998 8999999999987654 3999999999876432111 4688999999999875421 11
Q ss_pred cccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCC-CcEEEe
Q 008366 179 EITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT-DPYVTD 257 (568)
Q Consensus 179 ~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-~p~~~d 257 (568)
...+.....++.++|||+.++ ....+++++|++|||||+|++.. .+.||||||.|+|++.||.++ +|..+|
T Consensus 155 ~~~~~~~~~~d~~~ING~~~~-------~~~~l~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~dG~~~~~p~~~d 226 (318)
T 3g5w_A 155 GEGGIPGDVFDYYTINAKSFP-------ETQPIRVKKGDVIRLRLIGAGDH-VHAIHTHGHISQIAFKDGFPLDKPIKGD 226 (318)
T ss_dssp TCCCCTTCCCCEEEETTBCBT-------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTSCEEEEEETTEEEEEEEEES
T ss_pred ccCCCCCCcCcEEEEcCcCCC-------CCccEEeCCCCEEEEEEEeCCCc-eEEEEECCcEEEEEecCCcccCCCcccc
Confidence 112222235789999999653 23468999999999999999976 567999999999999999988 789999
Q ss_pred EEEECCCceEEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCC
Q 008366 258 VVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGAS 312 (568)
Q Consensus 258 ~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~ 312 (568)
++.|.||||+||+++++ +||.|.+|||...+...+. .......++|+|++..
T Consensus 227 tv~l~pger~~v~~~a~-~pG~w~~hCH~~~H~~~g~--~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 227 TVLIGPGERYDVILNMD-NPGLWMIHDHVDTHTTNGD--KPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEECTTCEEEEEEECC-SCSEEEEEESSGGGSCBTT--BSSCBSEEEEEETTTC
T ss_pred EEEECCCCEEEEEEECC-CCeeEEEEeccHHHhhccC--cCCCCCEEEEEECCCC
Confidence 99999999999999999 7999999999877654210 0113468899998853
No 19
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=3.1e-52 Score=483.60 Aligned_cols=268 Identities=16% Similarity=0.226 Sum_probs=208.8
Q ss_pred CCceEEEEEEEEEEeeccC----------------------------ceeeeEE-------EECCC--------CCCCeE
Q 008366 22 SAAVVEHSFQVKNLTIGRL----------------------------CRQQTIT-------AVNGS--------LPGPTI 58 (568)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~----------------------------G~~~~~~-------~~NG~--------~pGP~i 58 (568)
.+++|+|-+.|.+...... |+.+.++ +||+. +|||+|
T Consensus 18 ~~~~r~y~i~~~~~~w~y~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~PGP~I 97 (1065)
T 2j5w_A 18 WAKEKHYYIGIIETTWDYASDHGEKKLISVDTEHSNIYLQNGPDRIGRLYKKALYLQYTDETFRTTIEKPVWLGFLGPII 97 (1065)
T ss_dssp --CEEEEEEEEEEEEEESCCCCCCCBBTTBCSSSTHHHHCCCSSCCCSEEEEEEEEEESSSSTTSBCCCCGGGTTSCCCE
T ss_pred ccceeEEEEEEEEEEeecCCCCcCCCccccchhhhheecccCCcccCCeEeEEEEEEecceeecCCcccccccCCcCCeE
Confidence 6889999999998864222 2333444 68887 999999
Q ss_pred EEecCCEEEEEEEeCCCCCeeEEEcccccc----CCCCCCCCCC--cccccCCCCCeEEEEEEeCCC---------CCce
Q 008366 59 RVQEGDTLIVHVSNESPYNITIHWHGIFQI----RSIWADGPNM--ITQCPIRPGNSYTYKFRIINQ---------EGTL 123 (568)
Q Consensus 59 ~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~----~~~~~DG~~~--~~~~~i~PG~~~~y~f~~~~~---------~Gt~ 123 (568)
|+++||+|+|+|+|.|+++++|||||+++. +.+|+||+++ ++||+|+||++++|+|+++++ +|||
T Consensus 98 r~~~GD~v~v~v~N~l~~~tsiHwHGl~~~~~~DG~~~~dg~~g~~~t~~~I~PG~t~tY~f~~~~~~gp~~~d~~aGT~ 177 (1065)
T 2j5w_A 98 KAETGDKVYVHLKNLASRPYTFHSHGITYYKEHEGAIYPDNTTDFQRADDKVYPGEQYTYMLLATEEQSPGEGDGNCVTR 177 (1065)
T ss_dssp EEETTCEEEEEEEEESSSCBCCEESSSBCCGGGCCCCSCCCCCGGGTGGGCBCTTCEEEEEEECCSTTSCCTTSCSEEEE
T ss_pred EEeCCeEEEEEEEECCCCCeeEEeCCccCCcccCCcccCCCCCcccccccccCCCCEEEEEEEeccccCCccCCCCceEE
Confidence 999999999999999999999999999987 4467888888 899999999999999999443 4999
Q ss_pred eEecChhhhhh---cceEEEEEecCCCCCCCCC-CCCCceeEEEe------ecccCcHHHHHh-hc-cccCCC---CCCC
Q 008366 124 WWHAHISMLRA---TVHGAFIIRPKSGHKYPFP-KPDKEVPIVLG------EWWNDDIMDVAN-RG-EITGVG---PRIS 188 (568)
Q Consensus 124 ~YH~h~~~~~~---Gl~G~liV~~~~~~~~~~~-~~~~e~~l~~~------d~~~~~~~~~~~-~~-~~~g~~---~~~~ 188 (568)
|||||.+.+++ ||+|+|||+++.....|.+ .+|+|++|+++ ||+......... .. ...... ....
T Consensus 178 wYHsH~~~~~qv~~GL~G~lIV~~~~~~~~p~~~~~d~e~~l~l~d~d~~~~w~~~~~~~~~~~~p~~~~~~~~~~~~~~ 257 (1065)
T 2j5w_A 178 IYHSHIDAPKDIASGLIGPLIICKKDSLDKEKEKHIDREFVVMFSVVDENFSWYLEDNIKTYCSEPEKVDKDNEDFQQSN 257 (1065)
T ss_dssp EEECCSSHHHHHHHTCEEEEEEECTTCBSSSSBTTCCEEEEEEEEEEEGGGSTTHHHHHHHHCSCGGGCCTTCHHHHHHT
T ss_pred EEEeccCchhHhhCccEEEEEEecCcccCCCccCCCccceEEEeeeecCCccccccchhhhhhcCccccccccccccccC
Confidence 99999998763 9999999999875443332 46889999999 565543221110 00 000000 0124
Q ss_pred ceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCC-CeEEEEEcCceeEEEEecCCCCCcEEEeEEEECCCceE
Q 008366 189 DAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALN-NQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTT 267 (568)
Q Consensus 189 ~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pg~r~ 267 (568)
+.++|||+.+. ..+.+++++|++|||||+|++.. ..+.|||+||+|++ +|+.+|++.|.||||+
T Consensus 258 ~~~~iNG~~~~-------~~~~l~v~~Ge~vRlRliNag~~~~~~~~~i~Gh~f~v--------~p~~~dtv~I~pGer~ 322 (1065)
T 2j5w_A 258 RMYSVNGYTFG-------SLSGLSMCAEDRVKWYLFGMGNEVDVHAAFFHGQALTN--------KNYRIDTINLFPATLF 322 (1065)
T ss_dssp EEEEETTEETT-------CCCCCEEETTCEEEEEEEECSSTTCCEEEEETTCCEEE--------TTEEESEEEECBTCEE
T ss_pred cEEEECCccCC-------CCcceEECCCCEEEEEEEcCCcccceeEEEEcCCEEEE--------CCeeecEEEECCCcEE
Confidence 57999999541 35789999999999999999976 57889999999994 6789999999999999
Q ss_pred EEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCC
Q 008366 268 DVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGAST 313 (568)
Q Consensus 268 dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 313 (568)
||+|+++ .+|.|+|+||...+... ...+.++|.+...
T Consensus 323 dVlv~~~-~pG~y~i~~h~~~h~~~--------Gm~~~~~V~~~~~ 359 (1065)
T 2j5w_A 323 DAYMVAQ-NPGEWMLSCQNLNHLKA--------GLQAFFQVQECNK 359 (1065)
T ss_dssp EEEEECC-SCEEEEEEECSHHHHHT--------TCEEEEEEECSCC
T ss_pred EEEEEeC-CCeeEEEEecCcchhhC--------CCEEEEEEecCCC
Confidence 9999999 48999999998765432 4678888876544
No 20
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=100.00 E-value=3.9e-51 Score=419.28 Aligned_cols=272 Identities=29% Similarity=0.489 Sum_probs=226.5
Q ss_pred ceEEEEEEEEEEeeccC-ceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccc
Q 008366 24 AVVEHSFQVKNLTIGRL-CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQC 102 (568)
Q Consensus 24 ~~~~~~~~~~~~~~~~~-G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~ 102 (568)
++++|+|++++..++++ |+++.+|+|||++|||+|+|++||+|+|+|+|.++.+++|||||+.+...+|+||+++++||
T Consensus 2 ~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pGP~I~v~~Gd~v~v~v~N~l~~~~siH~HG~~~~~~~~~DGvp~vtq~ 81 (339)
T 2zwn_A 2 AEREFDMTIEEVTIKVAPGLDYKVFGFNGQVPGPLIHVQEGDDVIVNVTNNTSLPHTIHWHGVHQKGTWRSDGVPGVTQQ 81 (339)
T ss_dssp CEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEESSSCBCCEEETCCCTTCGGGSCCBTTTBC
T ss_pred ceEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCeEEEECCCEEEEEEEECCCCCccEEeCCCCcCCCcccCCCCccccC
Confidence 47899999999998885 99999999999999999999999999999999999999999999999999889999999999
Q ss_pred cCCCCCeEEEEEEeCCCCCceeEecChhh--hh--hcceEEEEEecCCCCCCCCCCCCCceeEEEeecccCcHHHHHhhc
Q 008366 103 PIRPGNSYTYKFRIINQEGTLWWHAHISM--LR--ATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVANRG 178 (568)
Q Consensus 103 ~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~--~~--~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 178 (568)
+|.||++++|+|++ +++||||||||... +. .||+|++||+++.....+ ...++|++++++||+..... ..
T Consensus 82 ~I~PG~~~~y~f~~-~~~Gt~wyH~H~~~~~q~~~~Gl~G~liV~p~~~~~~~-~~~d~e~~l~l~d~~~~~~~----~~ 155 (339)
T 2zwn_A 82 PIEAGDSYTYKFKA-DRIGTLWYHCHVNVNEHVGVRGMWGPLIVDPKQPLPIE-KRVTKDVIMMMSTWESAVAD----KY 155 (339)
T ss_dssp CBCTTCEEEEEEEC-CSCEEEEEECCSSHHHHTTTSCCEEEEEEECSSCCTTG-GGCSEEEEEEEEEECGGGTT----CT
T ss_pred ccCCCCeEEEEEEC-CCCEEEEEEecCCchhhhhcCCceEeEEecCCCccccc-ccCCceEEEEeeheeccccc----cc
Confidence 99999999999998 89999999999876 22 499999999987643211 23578999999999863211 00
Q ss_pred cccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCC-CcEEEe
Q 008366 179 EITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT-DPYVTD 257 (568)
Q Consensus 179 ~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-~p~~~d 257 (568)
...+.....++.++|||+.++ ....+++++|++|||||+|++.. .+.||||||.|+|++.||.++ .|..+|
T Consensus 156 ~~~g~~~~~~~~~~ING~~~~-------~~~~~~v~~G~~vrlrliN~~~~-~h~~hlhGh~f~vi~~DG~~~~~p~~~d 227 (339)
T 2zwn_A 156 GEGGTPMNVADYFSVNAKSFP-------LTQPLRVKKGDVVKIRFFGAGGG-IHAMHSHGHDMLVTHKDGLPLDSPYYAD 227 (339)
T ss_dssp TCCCSTTSCCCEEEETTBCTT-------SSCCEEECTTCEEEEEEEECSSS-CEEEEETTCCEEEEEETTEEEEEEEEES
T ss_pred CCCCCCccccceEEEccccCC-------CcccEEECCCCEEEEEEEeCCCc-eEEEEECCcEEEEEEeCCeecCCCcEEE
Confidence 011112225688999999653 23568999999999999999955 777999999999999999988 488999
Q ss_pred EEEECCCceEEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCC
Q 008366 258 VVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGAS 312 (568)
Q Consensus 258 ~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~ 312 (568)
++.|.||||+||+|+++ +||.|+++||.......+ ........++|+|++..
T Consensus 228 tv~l~pg~r~~v~~~~~-~pG~w~~hch~~~H~~~~--~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 228 TVLVSPGERYDVIIEAD-NPGRFIFHDHVDTHVTAG--GKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEEECTTCEEEEEEECC-SCSEEEEEECCGGGSCBT--TBSSCSSEEEEEETTSC
T ss_pred EEEECCCCEEEEEEEeC-CCeeEEEEEechhhcccc--cccCCCcEEEEEECCCC
Confidence 99999999999999998 689999999987653211 01123468999998854
No 21
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=4.2e-53 Score=472.12 Aligned_cols=230 Identities=14% Similarity=0.197 Sum_probs=177.0
Q ss_pred ceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCC--------cccccCCCCCeEEE
Q 008366 41 CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNM--------ITQCPIRPGNSYTY 112 (568)
Q Consensus 41 G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~--------~~~~~i~PG~~~~y 112 (568)
|+.+..|+ ++|||+||+++||+|+|+|+|.++++++|||||+++.. ++||+++ ++||+|+||++++|
T Consensus 63 ~~~~~~~~---~~pGP~Ir~~~GD~v~V~v~N~l~~~tsIHwHGl~~~~--~~DG~p~~Dg~~~~~vtq~~I~PG~s~tY 137 (742)
T 2r7e_A 63 AKPRPPWM---GLLGPTIQAEVYDTVVITLKNMASHPVSLHAVGVSYWK--ASEGAEYDDQTSQREKEDDKVFPGGSHTY 137 (742)
T ss_dssp SSCSTTTT---TTSEEEEEECSEEEEECCEECCSSSCCCCCCSSSCCCS--SSSCCCSSCSCCSSSSSSSSCCTTCEECC
T ss_pred Cccccccc---CCcCCeEEEECCCEEEEEEEECCCCCEeEEecCcccCc--cccCCccCCCCcccccccCcCCCCCeEEE
Confidence 55565554 99999999999999999999999999999999999764 2465554 88999999999999
Q ss_pred EEEeCC---------CCCceeEecChhhhh--h-cceEEEEEecCCCCCCCCCCCCCceeEEEee------cccCcHHHH
Q 008366 113 KFRIIN---------QEGTLWWHAHISMLR--A-TVHGAFIIRPKSGHKYPFPKPDKEVPIVLGE------WWNDDIMDV 174 (568)
Q Consensus 113 ~f~~~~---------~~Gt~~YH~h~~~~~--~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d------~~~~~~~~~ 174 (568)
+|++++ ++||||||||.+... . ||+|+|||+++.....+.....+|+++++++ |+.......
T Consensus 138 ~f~v~~~~gP~~~d~~~GT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~e~~l~~~~~de~~~w~~~~~~~~ 217 (742)
T 2r7e_A 138 VWQVLKENGPMASDPLCLTYSYLSHVDLVKDLNSGLIGALLVCREGSLAKEKTQTLHKFILLFAVFDEGKSWHSETKNSL 217 (742)
T ss_dssp EEEECGGGSCCSSSCSSCCEEECCCSCSHHHHHHHCCEEEEECSSSCTTTTTTTCCCEECCCEECCCCSSSSCCCCCC--
T ss_pred EEEeccccCCCcCCCCcEEEEEccCCChHHHhhCCcEEEEEEecCcccCcccCceeeEEEEEeecccCCccccccccccc
Confidence 999842 469999999998743 3 9999999998765322211223888888754 544332111
Q ss_pred HhhccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCC-eEEEEEcCceeEEEEecCCCCCc
Q 008366 175 ANRGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNN-QLFFKIANHKFTVVAVDAGYTDP 253 (568)
Q Consensus 175 ~~~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p 253 (568)
... ..........+.++|||+.+. ..+.+++++|++|||||+|++.+. .+.||||||.|+|++
T Consensus 218 ~~~-~~~~~~~~~~~~~~ING~~~~-------~~~~l~v~~Ge~vrlrliN~g~~~~~h~~hlhGh~f~Vvg-------- 281 (742)
T 2r7e_A 218 MQD-RDAASARAWPKMHTVNGYVNR-------SLPGLIGCHRKSVYWHVIGMGTTPEVHSIFLEGHTFLVRN-------- 281 (742)
T ss_dssp ------CCSCCCCCCCCEETTBCTB-------CCCCCEECSSSCEEEECCCCCSSSCCCCCCCTTCCCEETT--------
T ss_pred ccc-CCCccccccCceEEECCccCC-------CCcceEEcCCCEEEEEEEeCCCCCcceEEEECCCEEEEEe--------
Confidence 000 001111223567899999541 346789999999999999999775 677999999999973
Q ss_pred EEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCC
Q 008366 254 YVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPP 292 (568)
Q Consensus 254 ~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~ 292 (568)
..+|++.|.||++++|.|+++ +||.|+++||...+...
T Consensus 282 ~~~Dtv~v~Pg~~~~v~~~~~-~pG~w~~hCH~~~H~~~ 319 (742)
T 2r7e_A 282 HRQASLEISPITFLTAQTLLM-DLGQFLLFCHISSHQHD 319 (742)
T ss_dssp EECCSCCCCTTCCCEEEECCC-SCSEECCCCCSSSSSTT
T ss_pred EecceEEeCCCcEEEEEEEeC-CCeeEEEEeCChhHHhC
Confidence 357899999999999999999 79999999998776554
No 22
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3.8e-49 Score=421.21 Aligned_cols=410 Identities=15% Similarity=0.115 Sum_probs=261.8
Q ss_pred CCceEEEEEEEEEEeeccCceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCccc
Q 008366 22 SAAVVEHSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQ 101 (568)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~ 101 (568)
.+.+++++++++...+. +...+++|||++ ||+|+|++||+|+|+|+|.+...++|||||... .++
T Consensus 25 ~~~~~~~~~~~~~~~~~---f~g~~~~vNG~~-~p~i~v~~Gd~v~~~~~N~~~~~h~~~~~g~~~-----------~~~ 89 (447)
T 2dv6_A 25 APVVFTLRTGIAEGRMV---YIGVGGDIDHKI-NPTLVVHEGETVQVNLVNGEGAQHDVVVDQYAA-----------RSA 89 (447)
T ss_dssp CCEEEEEEEEEETTEEE---EEEESGGGTTCB-SCCEEEETTCEEEEEEECSSSSCBCCEETTTTE-----------ECC
T ss_pred CCceEEEEEEecccEEE---EeccceeecCCc-CCeEEEcCCCEEEEEEEcCCCCceEEEEccCCc-----------ccc
Confidence 44556666665543333 444567999999 899999999999999999998889999998642 256
Q ss_pred ccCCCCCeEEEEEEeCCCCCceeEecChhhhhh-cceEEEEEecCCCCCCCCC-----CCCCceeEEEeecccCcHHHHH
Q 008366 102 CPIRPGNSYTYKFRIINQEGTLWWHAHISMLRA-TVHGAFIIRPKSGHKYPFP-----KPDKEVPIVLGEWWNDDIMDVA 175 (568)
Q Consensus 102 ~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~~~~~~-----~~~~e~~l~~~d~~~~~~~~~~ 175 (568)
|+|.||++++|.|++ .++||||||||..+++. ||.|.|+|.++........ ....+++..+ |+.......+.
T Consensus 90 ~~i~pG~~~~~~f~~-~~~Gt~~y~~~~~~h~~~Gm~G~i~V~~~~~~~~~~~~~~~~~~~~~~p~~~-d~~~~~~~~~~ 167 (447)
T 2dv6_A 90 IVNGKNASSTFSFVA-SKVGEFNYYCSIAGHRQAGMEGNIQVLPGNRAEMKSSGADITRDPADLPGPI-GPRQAKTVRID 167 (447)
T ss_dssp CBCSTTBEEEEEEEC-CSCEEEEEECCSTTHHHHTCEEEEEEESSCCCCCCCSSBCCBCCTTCSCCCC-CSCCCCEEEEE
T ss_pred eecCCCCeEEEEEEc-CCCEEEEEEeCCCChhhCCCEEEEEEeCCccccCCCcchhhccChhhcCCcc-ccCCCcEEEEE
Confidence 899999999999998 77999999999887776 9999999997654321000 0000111000 11000000000
Q ss_pred h--h-ccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccC-CCeEEEEEcCceeEEEEecCCCC
Q 008366 176 N--R-GEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAAL-NNQLFFKIANHKFTVVAVDAGYT 251 (568)
Q Consensus 176 ~--~-~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~-~~~~~~~i~gh~~~via~DG~~~ 251 (568)
. . ....-......+.+++||+. ..|.+++++|++|||||+|.+. ...+++|+||. .+.||.+
T Consensus 168 l~~~~~~~~~~~g~~~~~~~~NG~~---------pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~----~~~DG~~- 233 (447)
T 2dv6_A 168 LETVEVKGQLDDNTTYTYWTFNGKV---------PGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGA----TGPGGAA- 233 (447)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTBB---------SCCCEEEETTCEEEEEEEECTTCSSCBCCEETTC----CSGGGGG-
T ss_pred EEEEEEEEeccCCceeEEEEECCcc---------CCCeEEecCCCEEEEEEEeCCCCceeEEEeeccc----cCCCCCC-
Confidence 0 0 00000001124578999983 3489999999999999999985 34566888874 3678863
Q ss_pred CcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccc
Q 008366 252 DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAY 331 (568)
Q Consensus 252 ~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~ 331 (568)
+++.|.||||+++.|+++ .+|+||+|||....... .. ....+.|.|.+... +| ..+. ....
T Consensus 234 -----~~~~i~pG~~~~~~~~~~-~~G~~~yh~h~~~~~~~---~~--~Gl~g~l~v~~~~~----~P---~~d~-~~~~ 294 (447)
T 2dv6_A 234 -----AFTQTDPGEETVVTFKAL-IPGIYVYHCATPSVPTH---IT--NGMYGLLLVEPEGG----LP---QVDR-EFYV 294 (447)
T ss_dssp -----GGCCBCTTCEEEEEEECC-SCEEEEEECCSSSHHHH---HH--TTCEEEEEEECTTC----SC---CCSE-EEEE
T ss_pred -----ccEEeCCCCEEEEEEECC-CCeEEEEEeCCCChHHH---Hh--CCCEEEEEEeCCCC----CC---CCCe-eEEE
Confidence 334699999999999998 57999999986210000 00 12456666654321 22 1110 0000
Q ss_pred cccccCccCCCCCCCCCCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcc
Q 008366 332 TFYSNITGLSGGPQWVPCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVY 411 (568)
Q Consensus 332 ~~~~~l~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~ 411 (568)
.+ .+. ..... . ...... .+..... . ......|.+||.++...
T Consensus 295 ~~-~~~--~~~~~----~--~~~g~~--~~~~~~~--------~--~~~~~~~~iNG~~~~~~----------------- 336 (447)
T 2dv6_A 295 MQ-GEI--YTVKS----F--GTSGEQ--EMDYEKL--------I--NEKPEYFLFNGSVGSLT----------------- 336 (447)
T ss_dssp EE-EEE--CBSSC----T--TCCEEC--CBBHHHH--------H--TTCCSEEEETTSTTCCC-----------------
T ss_pred Ee-ccc--ccCCc----c--cccccc--cCChHHh--------h--ccCCCEEEECCcccCCC-----------------
Confidence 00 000 00000 0 000000 0000000 0 01112455665543110
Q ss_pred cCCCCCCCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCC
Q 008366 412 EPNFPNQPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNAS 491 (568)
Q Consensus 412 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~ 491 (568)
....+.++.|++++|+|.|.+. ...||||||||+|+||+.+.+ +
T Consensus 337 ------------------------------~~~~~~v~~g~~vrlrliN~~~--~~~h~~hlhGh~f~vv~~dG~-~--- 380 (447)
T 2dv6_A 337 ------------------------------RSHPLYASVGETVRIFFGVGGP--NFTSSFHVIGEIFDHVYSLGS-V--- 380 (447)
T ss_dssp ------------------------------CCCCEEECTTCEEEEEEEEEES--SCCEEEEEETCCEEEECGGGC-S---
T ss_pred ------------------------------CCcceEECCCCEEEEEEEeCCC--CceEeEEEcCcEEEEEEcCCc-c---
Confidence 0145688999999999999763 378999999999999998421 1
Q ss_pred CCCCCCcCCCCC-ceeeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecCCCCCCCCCCCCC
Q 008366 492 RDSKNFNLVNPQ-RRNTIAVPIGGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVENGPTPSTMLPPPPA 563 (568)
Q Consensus 492 ~~~~~~~~~~p~-~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~~~~~~~~~~p~ 563 (568)
+.+|. +|||+.|++++++.|+|++++||.|+||||+++|++.||+++|.|+...++ ..+.+||+
T Consensus 381 -------~~~p~~~~dtv~l~pg~r~~i~~~~~~pG~~~~hch~~~h~~~Gm~~~~~v~~~~~~-~~~~~~~~ 445 (447)
T 2dv6_A 381 -------VSPPLIGVQTVSVPPGGATIVDFKIDRAGRYILVDHALSRLEHGLVGFLNVDGPKND-SIMHEGPA 445 (447)
T ss_dssp -------SSCCEEEESEEEECTTEEEEEEEECCSCEEEEEEESSGGGGGGTCCEEEEECSCSCC-SSEEESCC
T ss_pred -------cCCCcccccEEEECCCcEEEEEEECCCCEEEEEEecCcCccccCCEEEEEEeCCCCc-cccCCCcc
Confidence 12344 699999999999999999999999999999999999999999999866542 33444444
No 23
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=100.00 E-value=1.2e-47 Score=384.56 Aligned_cols=241 Identities=26% Similarity=0.390 Sum_probs=209.3
Q ss_pred CCceEEEEEEEEEEeeccC-ceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcc
Q 008366 22 SAAVVEHSFQVKNLTIGRL-CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMIT 100 (568)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~-G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~ 100 (568)
...+++|+|++++...... |+.+.+|+|||++|||+|++++||+|+|+|+|.++++++|||||++. .++||+++++
T Consensus 31 ~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~~~~~~~iH~HG~~~---~~~DG~p~~~ 107 (288)
T 3gdc_A 31 GRTLREWDIVAVDKDFEIAPGIIFKGWSYNGRIPGPTLWAREGDALRIHFTNAGAHPHTIHFHGVHR---ATMDGTPGIG 107 (288)
T ss_dssp SCEEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEECSSSCBCCEESSCCC---GGGSCCTTST
T ss_pred CCcEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCcEEEeCCCEEEEEEEeCCCCcccEEeccccc---cccCCCCCcc
Confidence 4567899999999988764 99999999999999999999999999999999999999999999973 4579999999
Q ss_pred cccCCCCCeEEEEEEeCCCCCceeEecChhh---hhh-cceEEEEEecCCCCCCCCCCCCCceeEEEeecccCcHHHHHh
Q 008366 101 QCPIRPGNSYTYKFRIINQEGTLWWHAHISM---LRA-TVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVAN 176 (568)
Q Consensus 101 ~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~---~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~~ 176 (568)
+|+|+||++++|+|++ +++||||||||... +.. ||+|+|||+++... +..++|++|+++||+.++
T Consensus 108 ~~~i~PG~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~liV~~~~~~----~~~d~e~~l~~~d~~~~~------ 176 (288)
T 3gdc_A 108 AGSIAPGQSFTYEFDA-TPFGTHLYHCHQSPLAPHIAKGLYGGFIVEPKEGR----PPADDEMVMVMNGYNTDG------ 176 (288)
T ss_dssp TCSBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECSSCC----CCCSEEEEEEEEEECCSS------
T ss_pred ceeECCCCEEEEEEEc-CCCccEEEEecCcchHHHHhCcCeEEEEEeCCccC----CCCcceEEEEEeeEecCC------
Confidence 9999999999999999 99999999999974 233 99999999988653 246799999999998762
Q ss_pred hccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCC-eEEEEEcCceeEEEEecCCCC-CcE
Q 008366 177 RGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNN-QLFFKIANHKFTVVAVDAGYT-DPY 254 (568)
Q Consensus 177 ~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~-~p~ 254 (568)
+ ..++.++|||++++. ..+.++++.|++|||||+|++... .+.||||||.|+|++ +|..+ .+.
T Consensus 177 -----g---~~~~~~~iNG~~~~~------~~~~l~v~~Ge~vr~~l~N~g~~~~~H~fHlhG~~f~v~~-~g~~~~~~~ 241 (288)
T 3gdc_A 177 -----G---DDNEFYSVNGLPFHF------MDFPVKVKQHELVRIHLINVLEYDPINSFHIHGNFFHYYP-TGTMLTPSE 241 (288)
T ss_dssp -----T---TCCSEEEETTSTTHH------HHSCEEEETTCCEEEEEEECCCSSSEEEEEETTCCEEEEE-TTCCSSCSE
T ss_pred -----C---CCcceEEECcccccc------cCcccccCCCCEEEEEEEeCCCCCcceeEEEcCCEEEEEc-CCCccCCCc
Confidence 1 135789999996521 134689999999999999999654 678999999999998 55554 679
Q ss_pred EEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCC
Q 008366 255 VTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPP 292 (568)
Q Consensus 255 ~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~ 292 (568)
..|++.|.||||++|+++++ .||.|.++||...+...
T Consensus 242 ~~Dtv~v~pg~~~~v~~~~~-~pG~~~~hCH~~~H~~~ 278 (288)
T 3gdc_A 242 YTDTISQVQGQRGILELRFP-YPGKFMFHAHKTEFAEL 278 (288)
T ss_dssp EESEEEEETTCEEEEEECCC-SCEEEEEECSSHHHHTT
T ss_pred eeeEEEeCCCceEEEEEECC-CCEEEEEEecChHHHhc
Confidence 99999999999999999999 89999999998776554
No 24
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=100.00 E-value=8.3e-47 Score=385.22 Aligned_cols=268 Identities=24% Similarity=0.323 Sum_probs=219.2
Q ss_pred cCCceEEEEEEEEEEeecc-CceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC--CCeeEEEccccccCCCCCCCCC
Q 008366 21 ASAAVVEHSFQVKNLTIGR-LCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP--YNITIHWHGIFQIRSIWADGPN 97 (568)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~-~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~--~~~~iH~HG~~~~~~~~~DG~~ 97 (568)
..+++++|+|++++...++ +|+.+.+|+|||++|||+|++++||+|+|+|+|.+. .+++|||||+.. +||++
T Consensus 34 ~~~~~~~~~l~~~~~~~~~~~G~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~~-----~dG~~ 108 (327)
T 1kbv_A 34 DYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATG-----QGGGA 108 (327)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGT
T ss_pred CCCCEEEEEEEEEEEEEEeCCCcEEEEEEECCccCCCeEEEeCCCEEEEEEEECCCCCCceeeEeCcccc-----CCCCC
Confidence 3567899999999999887 799999999999999999999999999999999986 589999999852 48877
Q ss_pred CcccccCCCCCeEEEEEEeCCCCCceeEecChhh---hhh-cceEEEEEecCCCCCCCCCCCCCceeEEEeecccCcHHH
Q 008366 98 MITQCPIRPGNSYTYKFRIINQEGTLWWHAHISM---LRA-TVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMD 173 (568)
Q Consensus 98 ~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~---~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 173 (568)
..+ .|.||++++|+|++ +++||||||||.+. +.. ||+|+|||++++. ++.+|+|++++++||+......
T Consensus 109 ~~~--~i~PG~~~~y~f~~-~~~Gt~wyH~h~~~~~~~~~~Gl~G~~iV~~~~~----~p~~d~e~~l~~~d~~~~~~~~ 181 (327)
T 1kbv_A 109 AAT--FTAPGRTSTFSFKA-LQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEG----LPKVDKEFYIVQGDFYTKGKKG 181 (327)
T ss_dssp TTT--CBCTTEEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTT
T ss_pred cce--eecCCCEEEEEEEC-CCCeEEEEEeCCCChhhhhhcceEEEEEEecCCC----CCCCceEEEEEeeeeeccCccc
Confidence 543 59999999999998 88999999999753 333 9999999998652 3367899999999999865210
Q ss_pred HHhhc--cccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCC
Q 008366 174 VANRG--EITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT 251 (568)
Q Consensus 174 ~~~~~--~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~ 251 (568)
..... .........++.++|||+.++.. ..+.+++++|++|||||+|++....+.|||+||.|+||+.||.++
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~iNG~~~~~~-----~~~~l~v~~G~~vRlRliN~~~~~~~~~~l~Gh~f~vi~~DG~~~ 256 (327)
T 1kbv_A 182 AQGLQPFDMDKAVAEQPEYVVFNGHVGALT-----GDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKL 256 (327)
T ss_dssp CCEEECBCHHHHHHTCCSEEEETTSTTTTS-----GGGCEEEETTEEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC
T ss_pred cccccccChhHhccCCCceEEEcCcccCCC-----CceeEEeCCCCEEEEEEECCCCCCceeEEEeCCEEEEEEcCCCcC
Confidence 00000 00000012467999999976421 136799999999999999999888889999999999999999999
Q ss_pred CcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCC
Q 008366 252 DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGAST 313 (568)
Q Consensus 252 ~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 313 (568)
+|..+|++.|.||||+||+|+++ .+|.|+++||...+.. .....|+|+|++...
T Consensus 257 ~p~~~d~l~l~pGer~dv~v~~~-~pG~y~l~~h~~~~~~-------~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 257 INENVQSTIVPAGGSAIVEFKVD-IPGNYTLVDHSIFRAF-------NKGALGQLKVEGAEN 310 (327)
T ss_dssp EECSBSEEEECTTEEEEEEEEEC-SCEEEEEEESSTHHHH-------HSSCEEEEEEESCCC
T ss_pred CCCceeEEEECCCCEEEEEEEeC-CCeEEEEEeccccccc-------cCCcEEEEEECCCCC
Confidence 99999999999999999999999 6899999999876521 124789999987543
No 25
>2j5w_A Ceruloplasmin, ferroxidase; oxidoreductase, plasma protein, copper transport, copper, transport, polymorphism, glycoprotein, multi-copper oxidase; HET: NAG; 2.80A {Homo sapiens} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1kcw_A*
Probab=100.00 E-value=5.3e-46 Score=431.43 Aligned_cols=400 Identities=13% Similarity=0.142 Sum_probs=263.8
Q ss_pred ceeeeEEEECCCCCC--CeEEEecCCEEEEEEEeCCCCCeeEEEccccccC-CCCCCCCCCcccccCCCCCeEEEEEEeC
Q 008366 41 CRQQTITAVNGSLPG--PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIR-SIWADGPNMITQCPIRPGNSYTYKFRII 117 (568)
Q Consensus 41 G~~~~~~~~NG~~pG--P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~-~~~~DG~~~~~~~~i~PG~~~~y~f~~~ 117 (568)
|..+.+.++||++|| |.|++++||+|+++|.|. .+.+||||+++.. +.|+||++.++ |+|.||.+++|.|++
T Consensus 615 ~~~~~~~~iNG~~~g~~P~l~~~~gd~v~~~v~~~---g~~~~~Hgl~~~g~t~~~dG~~~~t-~~i~pg~~~t~~~~~- 689 (1065)
T 2j5w_A 615 QESNKMHSMNGFMYGNQPGLTMCKGDSVVWYLFSA---GNEADVHGIYFSGNTYLWRGERRDT-ANLFPQTSLTLHMWP- 689 (1065)
T ss_dssp HHHTEEEEETTBCTTCCCCCEEETTCCEEEEEECC---CSTTCCEEEEETTCCEEETTEEESE-EEECTTCEEEEEECC-
T ss_pred cccceEEEEeeEecCCCCceEEeCCCEEEEEEEcC---CCcceEEeeEEeCCceeecCeecce-EeecCCceEEEEEec-
Confidence 467899999999999 889999999999999976 4459999999988 88999999988 999999999999998
Q ss_pred CCCCceeEecChhhhhh-cceEEEEEecCCCCCCCCCCCCCceeEEE----eecccCcHHHHHhhcc-ccCCCCCCCceE
Q 008366 118 NQEGTLWWHAHISMLRA-TVHGAFIIRPKSGHKYPFPKPDKEVPIVL----GEWWNDDIMDVANRGE-ITGVGPRISDAF 191 (568)
Q Consensus 118 ~~~Gt~~YH~h~~~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~----~d~~~~~~~~~~~~~~-~~g~~~~~~~~~ 191 (568)
.++||||||||...++. ||.|.++|++......+...++.|.++.+ .||++.+...+..... ..+.. +...
T Consensus 690 ~~~Gt~~~h~h~~~~~~~Gm~g~~~V~~~~~~~~~~~~yd~e~~~~iaa~~~dW~~~~~~~~~~~~~~~~~~~---p~~~ 766 (1065)
T 2j5w_A 690 DTEGTFNVECLTTDHYTGGMKQKYTVNQCRRQSEDSTFYLGERTYYIAAVEVEWDYSPQREWEKELHHLQEQN---VSNA 766 (1065)
T ss_dssp CSCEEEEEEECSHHHHHTTCEEEEEEECCSCCCSCCCCCSEEEEEEEEEEEEEEESCSCCHHHHHHHHHHTCC---CCCT
T ss_pred CCCeEEEEecCCCcccCCCcEEEEEEcCCccccCCccCCCcceEEEEeeeeccccCCcchhhhhhccCCCccC---ccce
Confidence 89999999999998776 99999999987655445457788889999 8999876554332211 11111 1222
Q ss_pred EEcCCCC----------------CCCCC----------CCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEE
Q 008366 192 TINGMPG----------------DLYPC----------SENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVA 245 (568)
Q Consensus 192 ~iNG~~g----------------~~~~~----------~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via 245 (568)
++|+... ..+.. .+...|.|++++|+++++||.|... ..+++|.||... ..
T Consensus 767 ~~n~~~~~iG~tY~k~~y~~~~d~tft~~~~r~~~~~~v~~pGP~I~v~~Gd~v~v~l~N~~~-~~~sih~HGl~~--~~ 843 (1065)
T 2j5w_A 767 FLDKGEFYIGSKYKKVVYRQYTDSTFRVPVERKAEEEHLGILGPQLHADVGDKVKIIFKNMAT-RPYSIHAHGVQT--ES 843 (1065)
T ss_dssp TTCCTTTCCCSEEEEEEEEEESSTTCCSBCCCCGGGGGGTTSCCCEEEETTEEEEEEEEECSS-SCBCCEESSCBC--SC
T ss_pred eecCCCccccceEeeeEEEEEcCCcceecccCCccccccCCCCCEEEEecCCEEEEEEEeCCC-CCceEeeccccc--cC
Confidence 2332210 00111 1224589999999999999999964 455688877443 22
Q ss_pred ecCCCCCcEEEeEEEECCCceEEEEEEeCCC---------CceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCC
Q 008366 246 VDAGYTDPYVTDVVVIAPGQTTDVLLKADQP---------VGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANP 316 (568)
Q Consensus 246 ~DG~~~~p~~~d~~~l~pg~r~dv~~~~~~~---------~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~ 316 (568)
. | ...+.||++++..+.+.+. +|.||++++...... ...+. .+.|.+.....
T Consensus 844 ~-~---------~~~i~PG~~~ty~~~~~~~~gp~~~~~~~gt~wYhsh~~~~~q----~~~GL--~G~liV~~~~~--- 904 (1065)
T 2j5w_A 844 S-T---------VTPTLPGETLTYVWKIPERSGAGTEDSACIPWAYYSTVDQVKD----LYSGL--IGPLIVCRRPY--- 904 (1065)
T ss_dssp S-C---------CCCBCTTCEEEEEEECCGGGSCCTTSCSEEEEEEECCTTHHHH----HHTTC--EEEEEEECCC----
T ss_pred C-C---------CceeCCCCeEEEEEEecCccCCccccCCceEEEEecCCChHHh----hhccc--cceeEecCccc---
Confidence 1 2 1256799998888887642 269999988532100 11122 23233332111
Q ss_pred CCCCCCCCCCCCccccccccCccCCCCCCCCCCCCCCceEEEEEEc-cCcccCCCCCcccCCCCCceeeeecCcceeC-C
Q 008366 317 IMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVDERMFVTVG-LGLEQCPANATCQGPFSQRLSASMNNHSFQA-P 394 (568)
Q Consensus 317 ~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~-p 394 (568)
+. . . ..+ .+..+.+.+. +.. +. .+....|+.+|.. |
T Consensus 905 -l~----~-------------~---------~~~--~d~D~~l~~~~~d~------------~~-~~y~~~n~~~~~~~P 942 (1065)
T 2j5w_A 905 -LK----V-------------F---------NPR--RKLEFALLFLVFDE------------NE-SWYLDDNIKTYSDHP 942 (1065)
T ss_dssp -------------------------------CCC--CEEEEEEEEEEEEG------------GG-STTHHHHHHHHCSCG
T ss_pred -cc----c-------------c---------CCC--cceEEEEEEEeecC------------Cc-ceeeccCcccccCCc
Confidence 00 0 0 001 1122221111 100 00 0001122222221 1
Q ss_pred CchhhhhhhhhcCCCcccCCCCCCCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeec
Q 008366 395 TSLSILQAYFFNVGGVYEPNFPNQPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLH 474 (568)
Q Consensus 395 ~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlH 474 (568)
...+++...+... +..+..++ ......+.+.++.|++|+|+|.|.+. ..+.||||||
T Consensus 943 ~~v~~~~~~~~~~------------~~~~~iNG----------~~~~~~~~~~v~~G~~vr~~l~N~g~-~~~~HpfHlH 999 (1065)
T 2j5w_A 943 EKVNKDDEEFIES------------NKMHAING----------RMFGNLQGLTMHVGDEVNWYLMGMGN-EIDLHTVHFH 999 (1065)
T ss_dssp GGCCTTCHHHHHH------------TEEEEETT----------BCTTCCCCCEEETTCEEEEEEEECCS-TTCCEEEEES
T ss_pred cccCcchhhhhcc------------CceEEECC----------ccCCCCccEEeCCCCEEEEEEEeCCC-CCcceeEEEc
Confidence 1011111100000 00000111 01112356789999999999999752 2479999999
Q ss_pred CCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecCC
Q 008366 475 GYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVENGP 552 (568)
Q Consensus 475 G~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 552 (568)
||+|+|++++ |.+||||.|+|+++++|+|++||||.|+||||+++|++.|||+.|.|.+..
T Consensus 1000 G~~F~vv~~~-----------------p~~~DTv~v~pg~~~~v~~~ad~pG~w~~HCH~~~H~~~GM~~~~~V~~~~ 1060 (1065)
T 2j5w_A 1000 GHSFQYKHRG-----------------VYSSDVFDIFPGTYQTLEMFPRTPGIWLLHCHVTDHIHAGMETTYTVLQNE 1060 (1065)
T ss_dssp SCCEEETTTT-----------------CEEESEEEECTTCEEEEEECCCSCEEEEEEECCHHHHHTTCEEEEEEECCC
T ss_pred ccEEEEEecC-----------------CceeeEEEECCCCeEEEEEECCCCeeEEEEeCCHHHHhcCCcEEEEEecCc
Confidence 9999998652 679999999999999999999999999999999999999999999998654
No 26
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=100.00 E-value=4.6e-44 Score=356.27 Aligned_cols=238 Identities=21% Similarity=0.292 Sum_probs=199.9
Q ss_pred CCceEEEEEEEEEEeeccCceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCccc
Q 008366 22 SAAVVEHSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQ 101 (568)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~ 101 (568)
.+.+++|+|++++.. .+.....++++||++|||+||+++||+|+|+|+|.++++++|||||+++.. ++||++ ++|
T Consensus 4 ~g~~~~~~l~~~~~~--~~~~~~~~~~~ng~~pGP~i~~~~Gd~v~v~~~N~~~~~~siH~HG~~~~~--~~DG~~-~t~ 78 (276)
T 3kw8_A 4 GGEVRHLKMYAEKLA--DGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYEI--SSDGTA-MNK 78 (276)
T ss_dssp CCCEEEEEEEEEECT--TSCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT-TTT
T ss_pred cceEEEEEEEEEeCC--CCceecceeccCCcccCCeEEEECCCEEEEEEEECCCCCccEeecCcccCC--ccCCCc-CCc
Confidence 688999999999854 344556778899999999999999999999999999999999999999875 479999 899
Q ss_pred ccCCCCCeEEEEEEeCC------------CCCceeEecChhh------hhh-cceEEEEEecCCCCCCCCCCCCCceeEE
Q 008366 102 CPIRPGNSYTYKFRIIN------------QEGTLWWHAHISM------LRA-TVHGAFIIRPKSGHKYPFPKPDKEVPIV 162 (568)
Q Consensus 102 ~~i~PG~~~~y~f~~~~------------~~Gt~~YH~h~~~------~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~ 162 (568)
|+|.||++++|+|++.+ ++||||||||.++ +.. ||+|+|||+++... .+|+|++++
T Consensus 79 ~~i~pG~~~~Y~f~~~~~~~~~~g~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~drE~~l~ 153 (276)
T 3kw8_A 79 SDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTIV 153 (276)
T ss_dssp CSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEEE
T ss_pred CCCCCCCEEEEEEEcCCccccccCccCCCCCEEEEEecCccccccchhhhhCccEEEEEEecCCCc-----ccccceEEE
Confidence 99999999999999943 3799999999964 233 99999999998753 248999998
Q ss_pred EeecccCcHHHHHhhccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeE
Q 008366 163 LGEWWNDDIMDVANRGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFT 242 (568)
Q Consensus 163 ~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~ 242 (568)
+++| +|||+.+. ..+.++++.|++|||||+|.+.. .+.||||||.|+
T Consensus 154 l~~~-------------------------~iNG~~~~-------~~p~i~v~~G~~vri~l~N~~~~-~Hp~HlHG~~f~ 200 (276)
T 3kw8_A 154 FNDM-------------------------TINNRKPH-------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHGHRWA 200 (276)
T ss_dssp EETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTCCEE
T ss_pred eccc-------------------------ccceeccc-------CCCCEEEecCCEEEEEEecCCCc-ceeEEEccceeE
Confidence 8553 79999653 56899999999999999999975 667999999999
Q ss_pred EEEecCCCC----CcEEEeEEEECCCceEEEEEEeCC--CCceeEEEEeeccCCCCccccCCCcceEEEEEEcCC
Q 008366 243 VVAVDAGYT----DPYVTDVVVIAPGQTTDVLLKADQ--PVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGA 311 (568)
Q Consensus 243 via~DG~~~----~p~~~d~~~l~pg~r~dv~~~~~~--~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~ 311 (568)
+++ +|... .+..+|++.|.||+++++.+++++ +||.|++|||....... ...+.+.+...
T Consensus 201 v~~-~G~~~~p~~~~~~~Dtv~v~pg~~~~~~~~~~~~~npG~w~~HCH~~~H~~~--------GM~g~~~V~~~ 266 (276)
T 3kw8_A 201 DNR-TGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDM--------GMVGLFLVKKP 266 (276)
T ss_dssp SSS-SSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHT--------TCEEEEEEECT
T ss_pred Eec-cCccCCCcccccCCccEEeCCCceEEEEEEeccCCCCCeEEEECCCchHhhC--------CCeEEEEEeCC
Confidence 975 66543 246899999999999999999985 69999999998665432 35566666553
No 27
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=100.00 E-value=4e-44 Score=360.10 Aligned_cols=243 Identities=17% Similarity=0.264 Sum_probs=197.6
Q ss_pred ccccCCceEEEEEEEEEEeeccCceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCC
Q 008366 18 STFASAAVVEHSFQVKNLTIGRLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPN 97 (568)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~ 97 (568)
++.+.+.+++|+|.+++..... ..+.++++||++|||+||+++||+|+|+|+|.+++++||||||+++.. ++||++
T Consensus 22 p~~~~~~~~~~~~~a~~~~~~~--~~~~~~~~~gt~PGP~i~~~~GD~v~v~~~N~l~~~~siH~HG~~~~~--~~DG~~ 97 (299)
T 3t9w_A 22 PVRAQGTTRRITMYAEKISDEL--YGYGLAPGGATVPGPVLEMWEGDTLEIDLVNTTDRVLSLHPHGVDYDV--NSDGTL 97 (299)
T ss_dssp -----CCEEEEEEEEEEEETTE--EEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCG--GGSCCT
T ss_pred CcccCCCEEEEEEEEEecCCCc--eeeeecCCCCCccCceEEEECCeEEEEEEEECCCCCccEEeCCcccCC--ccCCCc
Confidence 4445888999999998765322 345566779999999999999999999999999999999999998765 469997
Q ss_pred CcccccCCCCCeEEEEEEeC------------CCCCceeEecChhhhh------h-cceEEEEEecCCCCCCCCCCCCCc
Q 008366 98 MITQCPIRPGNSYTYKFRII------------NQEGTLWWHAHISMLR------A-TVHGAFIIRPKSGHKYPFPKPDKE 158 (568)
Q Consensus 98 ~~~~~~i~PG~~~~y~f~~~------------~~~Gt~~YH~h~~~~~------~-Gl~G~liV~~~~~~~~~~~~~~~e 158 (568)
++||+|.||++++|+|+++ .++||||||||..+.. . ||+|+|||+++... .+|+|
T Consensus 98 -~~~~~i~PG~t~~Y~~~~~~~~~~~~~~~~~~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~~~~~~-----~~d~e 171 (299)
T 3t9w_A 98 -MNGSAVMPGQTRRYTWRSHVGYRRADGSWAEGTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVRRQGDL-----LPKRQ 171 (299)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEE
T ss_pred -cccCccCCCCeEEEEEEeecccccCCCcCCCCCceeEEEecCCcccccchhhhcccccceEEEeccccc-----Ccccc
Confidence 7999999999999999973 2679999999986532 2 99999999988653 56899
Q ss_pred eeEEEeecccCcHHHHHhhccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcC
Q 008366 159 VPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIAN 238 (568)
Q Consensus 159 ~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~g 238 (568)
+++++++| .+||+... ..+.+.++.|++|||||+|++... +.|||||
T Consensus 172 ~~l~~~~~-------------------------~~Ng~~~~-------~~p~l~v~~Ge~Vr~~liN~~~~~-HpfHlHG 218 (299)
T 3t9w_A 172 FTVVFNDM-------------------------MINNRAHH-------DAPTFEANLGERVEWIAIGHGSNF-HTFHLHG 218 (299)
T ss_dssp EEEEEETT-------------------------EETTCCTT-------CCCEEEEETTCEEEEEEEEESSCC-CEEEETT
T ss_pred ceeeeeee-------------------------eecCcccc-------ccccceecCCCEEEEEEEeccccc-eeeeEec
Confidence 99998655 37787542 568899999999999999999765 4699999
Q ss_pred ceeEEEEecCCCC---CcEEEeEEEECCCceEEEEEEeCC--CCceeEEEEeeccCCCCccccCCCcceEEEEEEcCC
Q 008366 239 HKFTVVAVDAGYT---DPYVTDVVVIAPGQTTDVLLKADQ--PVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGA 311 (568)
Q Consensus 239 h~~~via~DG~~~---~p~~~d~~~l~pg~r~dv~~~~~~--~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~ 311 (568)
|.|+++..++... .+..+|++.|.||||+++++.+.+ +||.|.++||....... ...+++.+...
T Consensus 219 h~F~v~~~g~~~~~~~~~~~~Dtv~v~PGe~~~~~via~~~dnPG~w~~HCHi~~H~~~--------GM~~~f~V~~~ 288 (299)
T 3t9w_A 219 HRWLDNRTGMRTSEYDPSPLIDIKDLNPGVSFGFQVIAGEGVGPGMWMYHCHVQNHSDM--------GMAGMFLVRNA 288 (299)
T ss_dssp CCEESSSSSSCCSTTCCCCEESEEECCTTCEEEEEEETTTTTCSEEEEEEECSHHHHHT--------TCEEEEEEECT
T ss_pred ceEEEEecccccCCcCCCCceeeEEeCCceeEEEEEEEeeCCCCeeEEEEcCCHHHHhc--------CCeEEEEEECC
Confidence 9999999888765 345789999999999999987663 68999999998776543 35666766654
No 28
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=100.00 E-value=3.4e-44 Score=363.49 Aligned_cols=243 Identities=20% Similarity=0.304 Sum_probs=201.7
Q ss_pred cccCCceEEEEEEEEEEeeccCc-eeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCC
Q 008366 19 TFASAAVVEHSFQVKNLTIGRLC-RQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPN 97 (568)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~G-~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~ 97 (568)
+.+.+.+++++|.+++. ++| ..+.++..||++|||+||+++||+|+|+|+|.++++++|||||+++... +||++
T Consensus 7 ~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~t~PGP~i~~~~Gd~v~v~~~N~l~~~~siH~HG~~~~~~--~dG~~ 81 (313)
T 3tas_A 7 APAGGEVKRIKLYAERL---GGGQMGYGLEKGKATIPGPLIELNEGDTLHIEFENTMDVPVSLHVHGLDYEIS--SDGTK 81 (313)
T ss_dssp CCCCCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCCGG--GSCST
T ss_pred CCCCceEEEEEEEEEEc---CCCceeeeeecCCccccCCeEEEECCCEEEEEEEECCCCCccEeecCCcCCcc--CCCCc
Confidence 33577889999987643 455 4456778899999999999999999999999999999999999998654 69998
Q ss_pred CcccccCCCCCeEEEEEEeC------------CCCCceeEecChhhhh-------hcceEEEEEecCCCCCCCCCCCCCc
Q 008366 98 MITQCPIRPGNSYTYKFRII------------NQEGTLWWHAHISMLR-------ATVHGAFIIRPKSGHKYPFPKPDKE 158 (568)
Q Consensus 98 ~~~~~~i~PG~~~~y~f~~~------------~~~Gt~~YH~h~~~~~-------~Gl~G~liV~~~~~~~~~~~~~~~e 158 (568)
.+||+|.||++++|+|++. .++||||||||..++. .||+|+|||+++... .+|+|
T Consensus 82 -~~~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~~~~~~-----~~d~e 155 (313)
T 3tas_A 82 -QSRSDVEPGGTRTYTWRTHVPGRRADGTWRAGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDRT 155 (313)
T ss_dssp -TTTCCBCTTCEEEEEEBCCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCB-----CCSEE
T ss_pred -cccCCcCCCCEEEEEEEeccCCccccccccCCCceEEEEeecCcccccchhhhhccccCceEeeccccc-----ccccc
Confidence 5899999999999999862 3679999999986532 299999999988753 56899
Q ss_pred eeEEEeecccCcHHHHHhhccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcC
Q 008366 159 VPIVLGEWWNDDIMDVANRGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIAN 238 (568)
Q Consensus 159 ~~l~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~g 238 (568)
++|+++|| ++||+.+. ..+.+.++.|++|||||+|++.. .+.|||||
T Consensus 156 ~~l~~~d~-------------------------t~Ng~~~~-------~~~~l~v~~Ge~vr~~liN~g~~-~hpfHlHG 202 (313)
T 3tas_A 156 HTIVFNDM-------------------------TINNRPAH-------TGPDFEATVGDRVEFVMITHGEY-YHTFHLHG 202 (313)
T ss_dssp EEEEEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESSC-CEEEEETT
T ss_pred ceeeccch-------------------------hcccCCcc-------cccccccccCCEEEEEEeccccc-ceeeeecC
Confidence 99999876 46777543 45789999999999999999955 56699999
Q ss_pred ceeEEEEecCCCC---CcEEEeEEEECCCceEEEEEEeCC--CCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCC
Q 008366 239 HKFTVVAVDAGYT---DPYVTDVVVIAPGQTTDVLLKADQ--PVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGAST 313 (568)
Q Consensus 239 h~~~via~DG~~~---~p~~~d~~~l~pg~r~dv~~~~~~--~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 313 (568)
|.|++++.||... .+..+|++.|.||||+++++.+.+ +||.|.+|||....... ...+++.++....
T Consensus 203 h~F~v~~~~~~~~~~~~~~~~Dtv~l~Pger~~v~v~a~~~~nPG~w~~HCHi~~H~~~--------GM~~~f~V~~~d~ 274 (313)
T 3tas_A 203 HRWADNRTGMLTGPDDPSQVIDNKICGPADSFGFQVIAGEGVGAGAWMYHCHVQSHSDM--------GMVGLFLVKKPDG 274 (313)
T ss_dssp CCEESSTTSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHT--------TCEEEEEEECTTC
T ss_pred CeeEEEEECCccCCCCCCeeeeEEEeCCCcceEEEEEeccCCCCEeEEEEeCChHHHHC--------CCeEEEEEECCCC
Confidence 9999999998765 478899999999999999998764 68999999998776543 3667777765433
No 29
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=100.00 E-value=5.3e-43 Score=372.89 Aligned_cols=268 Identities=21% Similarity=0.284 Sum_probs=219.1
Q ss_pred cCCceEEEEEEEEEEeecc-CceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC--CCeeEEEccccccCCCCCCCCC
Q 008366 21 ASAAVVEHSFQVKNLTIGR-LCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP--YNITIHWHGIFQIRSIWADGPN 97 (568)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~-~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~--~~~~iH~HG~~~~~~~~~DG~~ 97 (568)
..+.+++|+|++++..++. +|+.+.+|+|||++|||+|++++||+|+|+|+|.++ .+++|||||+.. +||++
T Consensus 24 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~~-----~dG~~ 98 (442)
T 2zoo_A 24 DHSAKVVINLETREQVGRIADGVEYVFWSFGETVPGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVTG-----PGGGA 98 (442)
T ss_dssp SSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGG
T ss_pred CCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCcCCCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCcC-----CCCCC
Confidence 4677899999999999885 799999999999999999999999999999999985 599999999874 38877
Q ss_pred CcccccCCCCCeEEEEEEeCCCCCceeEecChh---hhhh-cceEEEEEecCCCCCCCCCCCCCceeEEEeecccCcHHH
Q 008366 98 MITQCPIRPGNSYTYKFRIINQEGTLWWHAHIS---MLRA-TVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMD 173 (568)
Q Consensus 98 ~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~---~~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~ 173 (568)
..+ +|.||++++|+|++ +++||||||||.+ .+.. ||+|+|||++++. .+.+|+|++|+++||+......
T Consensus 99 ~~~--~i~pg~~~~y~f~~-~~~Gt~~yH~H~~~~~~~~~~Gl~G~~iv~~~~~----~~~~d~e~~l~l~d~~~~~~~~ 171 (442)
T 2zoo_A 99 ESS--FTAPGHTSTFNFKA-LNPGLYIYHCATAPVGMHIANGMYGLILVEPKEG----LAPVDREYYLVQGDFYTKGEFG 171 (442)
T ss_dssp GGC--CBCTTCEEEEEEEC-CSCEEEEEECCCSSHHHHHHTTCEEEEEEECTTC----CCCCSEEEEEEEEEECBSSCTT
T ss_pred ccE--EECCCCEEEEEEEc-CCCeEEEEecCCCChHHHHhCccEEEEEEeCCCC----CCCCCceEEEEeeeeeccCccc
Confidence 643 69999999999998 8999999999753 3333 9999999998753 2367899999999999775310
Q ss_pred HH-hh-ccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCC
Q 008366 174 VA-NR-GEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT 251 (568)
Q Consensus 174 ~~-~~-~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~ 251 (568)
.. .. ..........+++++|||+.+... ..+.+++++|++|||||+|++....+.|||+||+|++|+.||.++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~liNG~~~~~~-----~~~~l~v~~G~~vrlrliN~~~~~~~~~~i~g~~~~vi~~DG~~~ 246 (442)
T 2zoo_A 172 EAGLQPFDMAKAIDEDADYVVFNGSVGSTT-----DENSLTAKVGETVRLYIGNGGPNLVSSFHVIGEIFDTVYVEGGSL 246 (442)
T ss_dssp CCEEECBCHHHHHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEEEESSCCEEEEEETCCBSEEEGGGSSC
T ss_pred ccccccCChhHhccCCCCEEEECCCcCCCC-----CCCceEeCCCCEEEEEEEeCCCCCceeeEEcCCEEEEEecCCccC
Confidence 00 00 000000113568999999964311 136899999999999999999888889999999999999999999
Q ss_pred CcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCC
Q 008366 252 DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGAST 313 (568)
Q Consensus 252 ~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 313 (568)
.|..++++.|.||||+||+|+++ .+|.|+++|+...... .....++|+|.+...
T Consensus 247 ~p~~~~~~~l~pg~r~~v~v~~~-~~G~y~~~~~~~~~~~-------~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 247 KNHNVQTTLIPAGGAAIVEFKVE-VPGTFILVDHSIFRAF-------NKGALAMLKVEGPDD 300 (442)
T ss_dssp EECSBSEEEECTTEEEEEEEECC-SCEEEEEEESSTHHHH-------TTSCEEEEEEESCCC
T ss_pred CCccceEEEECCCeeEEEEEEcC-CCCeEEEEeccccccc-------ccCceEEEEecCCCC
Confidence 99999999999999999999999 6899999999766421 124789999987644
No 30
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=100.00 E-value=5.4e-43 Score=358.77 Aligned_cols=272 Identities=18% Similarity=0.187 Sum_probs=210.8
Q ss_pred cccCCceEEEEEEEEEEeecc-CceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCC
Q 008366 19 TFASAAVVEHSFQVKNLTIGR-LCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPN 97 (568)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~-~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~ 97 (568)
+...+.+++|+|++++..+++ +|+.+.+|+|||++|||+|++++||+|+|+|+|. .+++||||+++......||.+
T Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~~~ng~~pgP~i~~~~Gd~v~v~~~N~---~~~~h~Hg~~~~~~~~~~~~~ 102 (333)
T 1mzy_A 26 AASGPVINEFEMRIIEKEVQLDEDAYLQAMTFDGSIPGPLMIVHEGDYVELTLINP---PENTMPHNIDFHAATGALGGG 102 (333)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEETTEEEEEEEETTBSSCCEEEEETTCEEEEEEEEC---TTCCSCBCCEETTSCSGGGGG
T ss_pred cCCCCcEEEEEEEEEEEEEEcCCCcEEEEEEECCccCCCcEEecCCCEEEEEEEEC---CCCcccccceecCCCCCCCCC
Confidence 345678999999999999877 5999999999999999999999999999999999 578999999977644345555
Q ss_pred CcccccCCCCCeEEEEEEeCCCCCceeEecChhh-----hhh-cceEEEEEecCCCCCCC---CCCCCCceeEEEeeccc
Q 008366 98 MITQCPIRPGNSYTYKFRIINQEGTLWWHAHISM-----LRA-TVHGAFIIRPKSGHKYP---FPKPDKEVPIVLGEWWN 168 (568)
Q Consensus 98 ~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~-----~~~-Gl~G~liV~~~~~~~~~---~~~~~~e~~l~~~d~~~ 168 (568)
.++ .|.||++++|+|++ +++||||||||.++ +.. ||+|+|||++++....+ ...+|+|++|+++||+.
T Consensus 103 ~~~--~i~PG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~~~d~e~~l~l~D~~~ 179 (333)
T 1mzy_A 103 GLT--LINPGEKVVLRFKA-TRAGAFVYHCAPGGPMIPWHVVSGMAGCIMVLPRDGLKDHEGKPVRYDTVYYIGESDHYI 179 (333)
T ss_dssp GGC--CBCTTEEEEEEEEC-CSCEEEEEECCCSTTHHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECC
T ss_pred cee--EeCCCCEEEEEEEC-CCCEEEEEeecCCcccchhhhhCCCEEEEEEccCcCccccccCCCccchheeeeeeeecc
Confidence 555 49999999999998 88999999999974 443 99999999976542211 12568999999999988
Q ss_pred Cc--HHHHH---------hhccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEc
Q 008366 169 DD--IMDVA---------NRGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIA 237 (568)
Q Consensus 169 ~~--~~~~~---------~~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~ 237 (568)
.. ...+. ...... .....++.++|||+.+++. ..+.+++++|++||||++|++....+ +.++
T Consensus 180 ~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ING~~~~~~-----~~~~l~v~~Ger~Rl~n~~~~~~~~~-h~i~ 252 (333)
T 1mzy_A 180 PKDEDGTYMRFSDPSEGYEDMVAV-MDTLIPSHIVFNGAVGALT-----GEGALKAKVGDNVLFVHSQPNRDSRP-HLIG 252 (333)
T ss_dssp CBCTTSCBCCCSSHHHHHHHHHHH-HTTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EEET
T ss_pred CccccccccccccccccccchhHH-hhccCCcEEEECCcccccC-----CCcceEecCCCEEEEEECCCCCcccc-EEEC
Confidence 31 11000 000000 0113568999999975321 24679999999988877776644444 4588
Q ss_pred CceeEEEEecCCCCC-cE-EEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCC-CCccccCCCcceEEEEEEcCCCC
Q 008366 238 NHKFTVVAVDAGYTD-PY-VTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAP-PPTIVAFDNTTTRGIVVYDGAST 313 (568)
Q Consensus 238 gh~~~via~DG~~~~-p~-~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~-~~~~~~~~~~~~~ail~y~~~~~ 313 (568)
+|.++|++ ||.++. |. .+|++.|.||||+||+|+++ .||+|+++||...+. .. ...++++|.+...
T Consensus 253 ~h~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~a~-~pG~y~~~ch~~~h~~~~--------Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 253 GHGDLVWE-TGKFHNAPERDLETWFIRGGTAGAALYKFL-QPGVYAYVNHNLIEAVHK--------GATAHVLVEGEWD 321 (333)
T ss_dssp CCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTT--------CCEEEEEEESCCC
T ss_pred CCCeEEEe-CCcccCCCccCcceEEECCCceEEEEEEcC-CCEEEEEecChhhhHhhC--------CCEEEEEEcCCCC
Confidence 99999999 999985 44 58999999999999999999 589999999987653 32 4778999987533
No 31
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=100.00 E-value=7.3e-42 Score=350.92 Aligned_cols=267 Identities=21% Similarity=0.287 Sum_probs=201.6
Q ss_pred cCCceEEEEEEEEEEeec--cCceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC--CCeeEEEccccccCCCCCCCC
Q 008366 21 ASAAVVEHSFQVKNLTIG--RLCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP--YNITIHWHGIFQIRSIWADGP 96 (568)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~--~~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~--~~~~iH~HG~~~~~~~~~DG~ 96 (568)
..+.+++|+|++++.... +||+.+.+|+|||++|||+|++++||+|+|+|+|.+. ..+++|+||. .++||.
T Consensus 28 ~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~-----~~~~~~ 102 (336)
T 1oe1_A 28 SGPKVVEFTMTIEEKKMVIDDKGTTLQAMTFNGSMPGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGA-----TGALGG 102 (336)
T ss_dssp CCCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCCEEEETTCEEEEEEEECTTCCSCBCCEETTS-----CSGGGG
T ss_pred CCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCccCCCeEEEcCCCEEEEEEEcCCCCCccccceECCC-----CCCCCC
Confidence 366789999999999875 4599999999999999999999999999999999974 4566666664 344666
Q ss_pred CCcccccCCCCCeEEEEEEeCCCCCceeEecChhh----hhh-cceEEEEEecCCCCCCCC---CCCCCceeEEEeeccc
Q 008366 97 NMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISM----LRA-TVHGAFIIRPKSGHKYPF---PKPDKEVPIVLGEWWN 168 (568)
Q Consensus 97 ~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~----~~~-Gl~G~liV~~~~~~~~~~---~~~~~e~~l~~~d~~~ 168 (568)
+.+++ |.||++++|+|++ +++||||||||.++ +.. ||+|+|||++++....+. ..+|+|++|+++||++
T Consensus 103 ~~~~~--i~pG~~~~y~f~~-~~~Gt~~yH~h~~~~~~~~~~~Gl~G~liV~~~~~~~~~~~~~~~~D~e~~l~~~D~~~ 179 (336)
T 1oe1_A 103 AKLTN--VNPGEQATLRFKA-DRSGTFVYHCAPEGMVPWHVVSGMSGTLMVLPRDGLKDPQGKPLHYDRAYTIGEFDLYI 179 (336)
T ss_dssp GGGCC--BCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTTCCBCTTSCBCCCSEEEEEEEEEECC
T ss_pred cceEE--eCCCCEEEEEEEC-CCCeEEEEecCCCCchhHHHhCCCeEEEEEecCcCCcccccCcccCCceeEeeeeeeee
Confidence 66654 9999999999998 88999999999874 333 999999999876432111 2568999999999987
Q ss_pred CcH--HHHHhhccccC---------CCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEE-EEE
Q 008366 169 DDI--MDVANRGEITG---------VGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLF-FKI 236 (568)
Q Consensus 169 ~~~--~~~~~~~~~~g---------~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~-~~i 236 (568)
... ..+ ......+ .....++.++|||+.+... ..+.+++++|++||| +|++....+. ++|
T Consensus 180 ~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~liNG~~~~~~-----~~~~l~v~~GervRl--in~~~~~~~~~~~i 251 (336)
T 1oe1_A 180 PKGPDGKY-KDYATLAESYGDTVQVMRTLTPSHIVFNGKVGALT-----GANALTAKVGETVLL--IHSQANRDTRPHLI 251 (336)
T ss_dssp CBCTTSSB-CCCSSTGGGHHHHHHHHHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEE--EEEESSSCBCEEET
T ss_pred ccccCCce-eecccccccccchhhHhhcCCCCEEEECCeeccCC-----CCcceEcCCCCEEEE--EecCCCCccceEEE
Confidence 411 100 0000000 0013568999999965321 137899999997765 5555544433 456
Q ss_pred cCceeEEEEecCCCCCcE--EEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCC-CCccccCCCcceEEEEEEcCCCC
Q 008366 237 ANHKFTVVAVDAGYTDPY--VTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAP-PPTIVAFDNTTTRGIVVYDGAST 313 (568)
Q Consensus 237 ~gh~~~via~DG~~~~p~--~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~-~~~~~~~~~~~~~ail~y~~~~~ 313 (568)
+||.++|++ ||.++.|. .++++.|.+|||+||+|+++ .||.|+++||..... . ....|+++|++...
T Consensus 252 ~gh~~~Vi~-DG~~~~p~~~~~dtv~i~pGer~dvlv~~~-~pG~y~~~~h~~~~~~~--------~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 252 GGHGDWVWE-TGKFANPPQRDLETWFIRGGSAGAALYTFK-QPGVYAYLNHNLIEAFE--------LGAAGHIKVEGKWN 321 (336)
T ss_dssp TCCEEEEET-TCCTTSCCEEEESBCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHT--------TSCEEEEEEESCCC
T ss_pred CCcCceEeC-CCcCcCCccccceEEEECCCCcEEEEEEcC-CCceEEEEechhhcccc--------CCCeEEEEECCCCC
Confidence 999999997 99998653 47899999999999999999 589999999986532 2 24778999987544
No 32
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=100.00 E-value=4.4e-42 Score=353.15 Aligned_cols=270 Identities=19% Similarity=0.239 Sum_probs=204.7
Q ss_pred ccCCceEEEEEEEEEEeeccC--ceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCC
Q 008366 20 FASAAVVEHSFQVKNLTIGRL--CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPN 97 (568)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~--G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~ 97 (568)
.+.+.+++|+|++++...+.+ |+.+.+|+|||++|||+|++++||+|+|+|+|.+ +++||||+++......||..
T Consensus 33 ~~~~~~~~~~l~~~~~~~~~~~dg~~~~~~~~ng~~pgP~i~v~~Gd~v~v~~~N~~---~~~~~hg~~~~~~~~~~~~~ 109 (340)
T 2bw4_A 33 KTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPD---TNTLLHNIDFHAATGALGGG 109 (340)
T ss_dssp SSSCCEEEEEEEEEEEEEECSTTCCEEEEEEETTBSSCCEEEEETTCEEEEEEEECT---TCCSCBCCEETTSCSGGGGG
T ss_pred cCCCcEEEEEEEEEEEEEEECCCCcEEEEEEECCCCCCCcEEEcCCCEEEEEEEeCC---CCCccCcceeCCcCCCCCCc
Confidence 346788999999999988754 9999999999999999999999999999999997 56788887765433234444
Q ss_pred CcccccCCCCCeEEEEEEeCCCCCceeEecChhh----hhh-cceEEEEEecCCCCC----CCCCCCCCceeEEEeeccc
Q 008366 98 MITQCPIRPGNSYTYKFRIINQEGTLWWHAHISM----LRA-TVHGAFIIRPKSGHK----YPFPKPDKEVPIVLGEWWN 168 (568)
Q Consensus 98 ~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~----~~~-Gl~G~liV~~~~~~~----~~~~~~~~e~~l~~~d~~~ 168 (568)
.++ .|.||++++|+|++ +++||||||||.++ +.. ||+|+|||++++... .+. .+|+|++++++||++
T Consensus 110 ~~~--~i~PG~~~~y~~~~-~~~Gt~wyH~h~~~~~~~~~~~Gl~G~~iV~~~~~~~~~~~~p~-~~d~e~~l~l~D~~~ 185 (340)
T 2bw4_A 110 ALT--QVNPGEETTLRFKA-TKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPL-TYDKIYYVGEQDFYV 185 (340)
T ss_dssp GGC--CBCTTEEEEEEEEC-CSCEEEEEECCCTTCHHHHHHTTCEEEEEEECTBCEECTTSCEE-CCSEEEEEEEEEECC
T ss_pred cce--EeCCCCEEEEEEEC-CCCeEEEEEcCCCCchhhHHhCcCEEEEEEccCcCcccccCCCc-CcceeEEEeeeeeee
Confidence 444 49999999999998 78999999999874 333 999999999875321 122 468899999999997
Q ss_pred C--cHHHH---------HhhccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEc
Q 008366 169 D--DIMDV---------ANRGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIA 237 (568)
Q Consensus 169 ~--~~~~~---------~~~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~ 237 (568)
. ....+ ..... .......++.++|||+.++.. ..+.+++++|+++||++.|.+...++ ++++
T Consensus 186 ~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~iNG~~~~~~-----~~~~l~v~~G~r~Rl~n~~~~~~~~~-~~i~ 258 (340)
T 2bw4_A 186 PKDEAGNYKKYETPGEAYEDAV-KAMRTLTPTHIVFNGAVGALT-----GDHALTAAVGERVLVVHSQANRDTRP-HLIG 258 (340)
T ss_dssp CBCTTSCBCCCCSHHHHHHHHH-HHHHTTCCSEEEETTSTTTTS-----GGGCEEEETTCEEEEEEEESSSCBCE-EEET
T ss_pred ccccCCcccccccccccccchh-hHhhcCCCCEEEECCccCCcc-----CCCceEcCCCCEEEEEECCCCCccce-EEec
Confidence 3 11100 00000 000013467999999965310 14889999999888777766544444 5689
Q ss_pred CceeEEEEecCCCCC-cE-EEeEEEECCCceEEEEEEeCCCCceeEEEEeecc-CCCCccccCCCcceEEEEEEcCCCC
Q 008366 238 NHKFTVVAVDAGYTD-PY-VTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYA-APPPTIVAFDNTTTRGIVVYDGAST 313 (568)
Q Consensus 238 gh~~~via~DG~~~~-p~-~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~-~~~~~~~~~~~~~~~ail~y~~~~~ 313 (568)
+|.|+|++ ||.++. |. .+|++.|.||||+||+|+++ +||.|+++||... .... ...++++|++...
T Consensus 259 gh~~~Vi~-dG~~~~~p~~~~dtv~l~pGer~~v~v~~~-~pG~y~~~~h~~~~h~~~--------Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 259 GHGDYVWA-TGKFRNPPDLDQETWLIPGGTAGAAFYTFR-QPGVYAYVNHNLIEAFEL--------GAAGHFKVTGEWN 327 (340)
T ss_dssp CCEEEEET-TCCTTSCCEEEESCCCBCTTEEEEEEEECC-SCEEEEEEESSHHHHHTT--------SCEEEEEEESCCC
T ss_pred CcceEEeC-CCcccCCccccceEEEeCCCceEEEEEECC-CCeeeEEEcCchHHHHhC--------CCEEEEEECCCCc
Confidence 99999997 999884 43 58999999999999999999 5899999999873 3221 3668899987543
No 33
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=100.00 E-value=4.6e-40 Score=336.67 Aligned_cols=237 Identities=21% Similarity=0.301 Sum_probs=192.0
Q ss_pred CCceEEEEEEEEEEeeccCceeee-EEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcc
Q 008366 22 SAAVVEHSFQVKNLTIGRLCRQQT-ITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMIT 100 (568)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~G~~~~-~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~ 100 (568)
.+.+++|+|++++. ++|+... .+.+||++|||+|+|++||+|+|+|+|.++++++|||||+.+. .++||++ ++
T Consensus 45 ~g~~~~~~l~~~~~---~~~~~~~~~~~~ng~~pGP~I~v~~Gd~v~v~~~N~l~~~~sih~HG~~~~--~~~DG~~-~t 118 (343)
T 3cg8_A 45 GGEVRHLKMYAEKL---ADGQMGYGFEKGKASVPGPLIEVNEGDTLHIEFTNTMDVRASLHVHGLDYE--ISSDGTA-MN 118 (343)
T ss_dssp CCCEEEEEEEEEEC---GGGCEEEESSTTCCBSSCCCEEEETTCEEEEEEEECSSSCBCCEESSSBCC--GGGSCCT-TT
T ss_pred CCeEEEEEEEEEEc---cCCeeeeeeecCCCCccCCEEEEECCCEEEEEEEECCCCCeeEEecCcccC--CcCCCcc-cc
Confidence 56779999999975 3453221 2235899999999999999999999999999999999999987 3579999 88
Q ss_pred cccCCCCCeEEEEEEeCC------------CCCceeEecChhh------hhh-cceEEEEEecCCCCCCCCCCCCCceeE
Q 008366 101 QCPIRPGNSYTYKFRIIN------------QEGTLWWHAHISM------LRA-TVHGAFIIRPKSGHKYPFPKPDKEVPI 161 (568)
Q Consensus 101 ~~~i~PG~~~~y~f~~~~------------~~Gt~~YH~h~~~------~~~-Gl~G~liV~~~~~~~~~~~~~~~e~~l 161 (568)
||+|.||++++|+|++.. ++|+||||||..+ +.. ||+|++||+++... .+|+|+++
T Consensus 119 ~~~I~PG~~~~y~f~~~~pg~~~~g~~~~~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~~-----~pd~e~~l 193 (343)
T 3cg8_A 119 KSDVEPGGTRTYTWRTHKPGRRDDGTWRPGSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGDV-----LPDATHTI 193 (343)
T ss_dssp TCSBCTTCEEEEEEECCCCEECTTSCEECCSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTCC-----CCSEEEEE
T ss_pred cccccCCCEEEEEEEeCCCCcccccccCCCCceEEEEecCccccccchhhhhcCCeEEEEEecCCCC-----CCCceEEE
Confidence 999999999999999821 3589999999742 233 99999999987653 35789998
Q ss_pred EEeecccCcHHHHHhhccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCcee
Q 008366 162 VLGEWWNDDIMDVANRGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKF 241 (568)
Q Consensus 162 ~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 241 (568)
.++|| +|||+.+. ..+.++++.|++|||||+|.+.. .+.||||||.|
T Consensus 194 ~~~d~-------------------------~iNG~~~~-------~~~~l~v~~Ge~vri~l~N~g~~-~HpfHlHGh~f 240 (343)
T 3cg8_A 194 VFNDM-------------------------TINNRKPH-------TGPDFEATVGDRVEIVMITHGEY-YHTFHMHGHRW 240 (343)
T ss_dssp EEETT-------------------------EETTCCTT-------CCCCEEEETTCEEEEEEEEESSC-CEEEEETTCCE
T ss_pred Ecccc-------------------------eecccCCC-------CCccEEeCCCCEEEEEEEcCCcc-ccccEecCcEE
Confidence 88664 79999642 45789999999999999999964 56699999999
Q ss_pred EEEEecCCCCC----cEEEeEEEECCCceEEEEEEeC--CCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCC
Q 008366 242 TVVAVDAGYTD----PYVTDVVVIAPGQTTDVLLKAD--QPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGA 311 (568)
Q Consensus 242 ~via~DG~~~~----p~~~d~~~l~pg~r~dv~~~~~--~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~ 311 (568)
+++ .+|.+.. +..+|++.|.|||+++++++++ ++||.|++|||...+... ...+.+.+...
T Consensus 241 ~v~-~~G~~~~p~~~~~~~Dtv~v~PG~~~~v~~~~~~~~~pG~w~~HCHi~~H~~~--------GM~g~~~V~~~ 307 (343)
T 3cg8_A 241 ADN-RTGILTGPDDPSRVIDNKITGPADSFGFQIIAGEGVGAGAWMYHCHVQSHSDM--------GMVGLFLVKKP 307 (343)
T ss_dssp ESS-SSSSCCSTTCCCCEESEEEECTTCEEEEEEETTTTTCSEEEEEEECSHHHHHT--------TCEEEEEEECT
T ss_pred EEe-ccCcccCCCCcccceeeEEeCCCCEEEEEEEECCCCCCeeEEEeCCCHHHHhc--------cCcEEEEEecC
Confidence 997 4665442 4678999999999999999974 379999999998765442 36667777653
No 34
>2dv6_A Nitrite reductase; electron transfer, reduction, denitrification, oxidoreductase; 2.20A {Hyphomicrobium denitrificans}
Probab=100.00 E-value=3.4e-38 Score=336.57 Aligned_cols=265 Identities=22% Similarity=0.316 Sum_probs=209.8
Q ss_pred CceEEEEEEEEEEeecc-CceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC--CCeeEEEccccccCCCCCCCCCCc
Q 008366 23 AAVVEHSFQVKNLTIGR-LCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP--YNITIHWHGIFQIRSIWADGPNMI 99 (568)
Q Consensus 23 ~~~~~~~~~~~~~~~~~-~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~--~~~~iH~HG~~~~~~~~~DG~~~~ 99 (568)
+.++.|+|++.+..... +|....+|+|||++|||+|++++||+++|||+|.+. ..++|||||+.. +||++..
T Consensus 161 ~~~~~~~l~~~~~~~~~~~g~~~~~~~~NG~~pgp~i~v~~G~~v~~rl~N~~~~~~~~~ih~Hg~~~-----~DG~~~~ 235 (447)
T 2dv6_A 161 AKTVRIDLETVEVKGQLDDNTTYTYWTFNGKVPGPFLRVRVGDTVELHLKNHKDSLMVHSVDFHGATG-----PGGAAAF 235 (447)
T ss_dssp CCEEEEEEEEEEEEEEEETTEEEEEEEETTBBSCCCEEEETTCEEEEEEEECTTCSSCBCCEETTCCS-----GGGGGGG
T ss_pred CcEEEEEEEEEEEEEeccCCceeEEEEECCccCCCeEEecCCCEEEEEEEeCCCCceeEEEeeccccC-----CCCCCcc
Confidence 45678888887766655 589999999999999999999999999999999975 579999999852 4998765
Q ss_pred ccccCCCCCeEEEEEEeCCCCCceeEecChh---hhh-hcceEEEEEecCCCCCCCCCCCCCceeEEEeecccCcHHHHH
Q 008366 100 TQCPIRPGNSYTYKFRIINQEGTLWWHAHIS---MLR-ATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDVA 175 (568)
Q Consensus 100 ~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~---~~~-~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~~ 175 (568)
+ .|.||++++|.|++ +++|+||||||.. .+. .||+|+|+|+++.. ++.+|+|+++++.+|+........
T Consensus 236 ~--~i~pG~~~~~~~~~-~~~G~~~yh~h~~~~~~~~~~Gl~g~l~v~~~~~----~P~~d~~~~~~~~~~~~~~~~~~~ 308 (447)
T 2dv6_A 236 T--QTDPGEETVVTFKA-LIPGIYVYHCATPSVPTHITNGMYGLLLVEPEGG----LPQVDREFYVMQGEIYTVKSFGTS 308 (447)
T ss_dssp C--CBCTTCEEEEEEEC-CSCEEEEEECCSSSHHHHHHTTCEEEEEEECTTC----SCCCSEEEEEEEEEECBSSCTTCC
T ss_pred E--EeCCCCEEEEEEEC-CCCeEEEEEeCCCChHHHHhCCCEEEEEEeCCCC----CCCCCeeEEEEecccccCCccccc
Confidence 4 49999999999998 7899999999974 223 39999999997652 235778999999999865310000
Q ss_pred hh--ccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCC-
Q 008366 176 NR--GEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTD- 252 (568)
Q Consensus 176 ~~--~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~- 252 (568)
.. ..........++.++|||+.++.. ..+.+++++|++|||||+|++....+.||||||.|+||+.||.++.
T Consensus 309 g~~~~~~~~~~~~~~~~~~iNG~~~~~~-----~~~~~~v~~g~~vrlrliN~~~~~~h~~hlhGh~f~vv~~dG~~~~~ 383 (447)
T 2dv6_A 309 GEQEMDYEKLINEKPEYFLFNGSVGSLT-----RSHPLYASVGETVRIFFGVGGPNFTSSFHVIGEIFDHVYSLGSVVSP 383 (447)
T ss_dssp EECCBBHHHHHTTCCSEEEETTSTTCCC-----CCCCEEECTTCEEEEEEEEEESSCCEEEEEETCCEEEECGGGCSSSC
T ss_pred ccccCChHHhhccCCCEEEECCcccCCC-----CCcceEECCCCEEEEEEEeCCCCceEeEEEcCcEEEEEEcCCcccCC
Confidence 00 000000012357899999976421 1257999999999999999998778889999999999999999984
Q ss_pred cE-EEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCC
Q 008366 253 PY-VTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGAST 313 (568)
Q Consensus 253 p~-~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~ 313 (568)
|. ..|++.|.||||++|+|+++ +||.|++|||...+... ...++++|++...
T Consensus 384 p~~~~dtv~l~pg~r~~i~~~~~-~pG~~~~hch~~~h~~~--------Gm~~~~~v~~~~~ 436 (447)
T 2dv6_A 384 PLIGVQTVSVPPGGATIVDFKID-RAGRYILVDHALSRLEH--------GLVGFLNVDGPKN 436 (447)
T ss_dssp CEEEESEEEECTTEEEEEEEECC-SCEEEEEEESSGGGGGG--------TCCEEEEECSCSC
T ss_pred CcccccEEEECCCcEEEEEEECC-CCEEEEEEecCcCcccc--------CCEEEEEEeCCCC
Confidence 44 68999999999999999999 79999999998776432 4678999987543
No 35
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=100.00 E-value=5.3e-39 Score=357.05 Aligned_cols=235 Identities=16% Similarity=0.220 Sum_probs=174.4
Q ss_pred CCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcc--------cccCCCCCeEEEEEEeCCC--
Q 008366 50 NGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMIT--------QCPIRPGNSYTYKFRIINQ-- 119 (568)
Q Consensus 50 NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~--------~~~i~PG~~~~y~f~~~~~-- 119 (568)
++++|||+|++++||+|+|+|+|.++++++|||||+++.. ++||+++++ ||+|+||++++|+|+++++
T Consensus 63 ~~~~pGP~I~~~~Gd~v~v~~~N~l~~~~siH~HGl~~~~--~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~g 140 (647)
T 1sdd_B 63 HLGILGPVIRAEVDDVIQVRFKNLASRPYSLHAHGLSYEK--SSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSG 140 (647)
T ss_dssp GGTTSCCCEEEETTCEEEEEECCCSSSCBCCEEETCC-----------------------CCBCTTCCEECCEECCTTTS
T ss_pred ccCCcCceEEEeCCCEEEEEEEECCCCceEEecCcceeCC--CCCCccccCCCCcccccCcccCCCCeEEEEEECCcccC
Confidence 4589999999999999999999999999999999999864 479999876 9999999999999999543
Q ss_pred ---CC----ceeEecChhhhhh---cceEEEEEecCCCCCC--CCCCCCCceeEEEe------ecccCcHHHHHhhcccc
Q 008366 120 ---EG----TLWWHAHISMLRA---TVHGAFIIRPKSGHKY--PFPKPDKEVPIVLG------EWWNDDIMDVANRGEIT 181 (568)
Q Consensus 120 ---~G----t~~YH~h~~~~~~---Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~------d~~~~~~~~~~~~~~~~ 181 (568)
+| |||||||.+...+ ||+|+|||+++..... ..+..++|++|+++ ||+.+.......... .
T Consensus 141 p~~~G~~c~T~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~-~ 219 (647)
T 1sdd_B 141 PENPGSACRAWAYYSAVNPEKDIHSGLIGPLLICRKGTLDKETNMPVDMREFVLLFMVFDEKKSWYYDKKPTRSWRRA-S 219 (647)
T ss_dssp CCSSSCSEEEEEEECCSSHHHHHTTTCEEEEEEECTTSSCTTSCCCSSCCEEEEEEEEEEGGGSSCCC------------
T ss_pred CCCCCCCceEEEEccCCCCcccccccCccCEEEeeCCCcccccCCCCcceeEEEEEEeecCccccccccCcccccccC-C
Confidence 58 9999999975433 9999999998764321 12334689999999 677664322100000 1
Q ss_pred CCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCC-eEEEEEcCceeEEEEecCCCCCcEEEeEEE
Q 008366 182 GVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNN-QLFFKIANHKFTVVAVDAGYTDPYVTDVVV 260 (568)
Q Consensus 182 g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p~~~d~~~ 260 (568)
......++.++|||+.+ ..|.+++++|++|||||+|++... .+.||+|||.|++++.|| ..+|++.
T Consensus 220 ~~~~~~~~~~~iNG~~~--------~~p~l~v~~G~~vrlrliN~~~~~~~h~~hlhG~~f~vi~~d~-----~~~d~v~ 286 (647)
T 1sdd_B 220 SEVKNSHEFHAINGMIY--------NLPGLRMYEQEWVRLHLLNLGGSRDIHVVHFHGQTLLENGTQQ-----HQLGVWP 286 (647)
T ss_dssp ----CCCEEEEETTBSS--------CCCCCEEETTCEEEEEEEECCCTTCCEEEEETTCCEEECSSSC-----EEESSEE
T ss_pred cchhhcCceeccCCEec--------CCCCeEEcCCCEEEEEEEeCCCCCcceeEEEcCcEEEEecCCC-----cccceEE
Confidence 11123568999999954 247899999999999999999764 778999999999998875 4789999
Q ss_pred ECCCceEEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEc
Q 008366 261 IAPGQTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYD 309 (568)
Q Consensus 261 l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~ 309 (568)
|.||||+||+|+++ +||.|++|||...+... +..+++.+.
T Consensus 287 l~pg~r~~v~~~~~-~pG~w~~hch~~~h~~~--------Gm~~~~~V~ 326 (647)
T 1sdd_B 287 LLPGSFKTLEMKAS-KPGWWLLDTEVGEIQRA--------GMQTPFLIV 326 (647)
T ss_dssp ECTTEEEEEEEECC-SSEEEEEECCCHHHHTT--------TCEEEEEEE
T ss_pred ECCCeEEEEEEEec-cceEeecccCccccccc--------ccccceeee
Confidence 99999999999999 68999999998766443 345555554
No 36
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=100.00 E-value=2.5e-40 Score=334.20 Aligned_cols=219 Identities=16% Similarity=0.236 Sum_probs=161.1
Q ss_pred eeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCC------cc--cccCCCCCeEEEEEE
Q 008366 44 QTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNM------IT--QCPIRPGNSYTYKFR 115 (568)
Q Consensus 44 ~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~------~~--~~~i~PG~~~~y~f~ 115 (568)
+..+++| ++|||+|+|++||+|+|+|+|.++++++|||||++.... +||++. ++ ||+|.||++++|+|+
T Consensus 49 ~~~~~~n-~~pGP~I~v~~Gd~v~v~~~N~l~~~~siH~HGl~~~~~--~dG~~~~dg~~~~~~~~~~I~PG~~~~Y~f~ 125 (306)
T 1sdd_A 49 KPQSRTS-GLLGPTLYAEVGDIMKVHFKNKAHKPLSIHAQGIKYSKF--SEGASYSDHTLPMEKMDDAVAPGQEYTYEWI 125 (306)
T ss_dssp CCCCSSC-CSCCCCEEEETTCEEEEEEEECSSSCBCCEEESSCCCTT--TSCCCSCCCCCHHHHTTTCBCTTCEEEEEEE
T ss_pred ccccccC-CccCCEEEEeCCCEEEEEEEECCCCcccEeecceecccc--cCCCccCCCCcccccCCCccCCCCeEEEEEE
Confidence 3456689 689999999999999999999999999999999995443 366554 33 799999999999999
Q ss_pred eCCC---------CCceeEecChhhhh--h-cceEEEEEecCCCCC-CC-CCCCCCceeEEEeecccCcHHHHHhhcccc
Q 008366 116 IINQ---------EGTLWWHAHISMLR--A-TVHGAFIIRPKSGHK-YP-FPKPDKEVPIVLGEWWNDDIMDVANRGEIT 181 (568)
Q Consensus 116 ~~~~---------~Gt~~YH~h~~~~~--~-Gl~G~liV~~~~~~~-~~-~~~~~~e~~l~~~d~~~~~~~~~~~~~~~~ 181 (568)
++++ +||||||||....+ . ||+|+|||+++.... .+ ....|+|++|+++||..... .
T Consensus 126 ~~~~~gp~~~d~~~GT~wYHsH~~~~~q~~~GL~G~liV~~~~~~~~~~~~~~~d~e~~l~~~d~d~~~~---------~ 196 (306)
T 1sdd_A 126 ISEHSGPTHDDPPCLTHIYYSYVNLVEDFNSGLIGPLLICKKGTLTEDGTQKMFEKQHVLMFAVFDESKS---------W 196 (306)
T ss_dssp CCGGGSCCSSSCSEEEEEEECCSSSHHHHHTTCCEEEEEECTTCBCTTSSBSSSCCCCCCBCCEEETTSS---------S
T ss_pred eCCccCCCCCCCCceEEEEeccCCchhhhccCceEEEEEccCCCCCccCCcCcccceEEEEEEecccccc---------c
Confidence 8543 37999999987644 3 999999999875321 11 12467899999999842210 0
Q ss_pred CCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCC-CeEEEEEcCceeEEEEecCCCCCcEEEeEEE
Q 008366 182 GVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALN-NQLFFKIANHKFTVVAVDAGYTDPYVTDVVV 260 (568)
Q Consensus 182 g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~~~ 260 (568)
....++.++|||+.+. ..|.+++++|++|||||+|++.. ..+.||||||.|++ || ..+|++.
T Consensus 197 --~~~~~~~~~ING~~~~-------~~p~l~v~~G~~vrlrliN~g~~~~~h~~hlhG~~~~~---dG-----~~~dtv~ 259 (306)
T 1sdd_A 197 --NQTSSLMYTVNGYVNG-------TMPDITVCAHDHISWHLIGMSSGPELFSIHFNGQVLEQ---NH-----HKISAIT 259 (306)
T ss_dssp --SCCCCEEECSSSCCSS-------CCCCCCCCCC------BBCCCSSSCEECCBCSSTTCEE---TT-----EECSCCC
T ss_pred --ccCCCcceeeCCEecC-------CCcceEEcCCCEEEEEEEeCCCCCccEEEEECCcEeee---CC-----EEcceEE
Confidence 0123578999999542 24789999999999999999986 46679999999986 77 4589999
Q ss_pred ECCCceEEEEEEeCCCCceeEEEEeeccCCCC
Q 008366 261 IAPGQTTDVLLKADQPVGSYYMAARAYAAPPP 292 (568)
Q Consensus 261 l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~ 292 (568)
|.||||+||+|+++ ++|.|+++||...+...
T Consensus 260 l~pger~~v~~~~~-~pG~~~~hch~~~H~~~ 290 (306)
T 1sdd_A 260 LVSATSTTANMTVS-PEGRWTIASLIPRHFQA 290 (306)
T ss_dssp EETTCCBC---------CCCCCBCCSTTTGGG
T ss_pred ECCCcEEEEEEEcC-CCeEEEEEeCChHHHhc
Confidence 99999999999998 78999999998766543
No 37
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=100.00 E-value=3.9e-39 Score=360.02 Aligned_cols=255 Identities=13% Similarity=0.122 Sum_probs=197.3
Q ss_pred CCceEEEEEEEEEEee--ccCce-----------------eeeEE-----EECC-----------CCCCCeEEEecCCEE
Q 008366 22 SAAVVEHSFQVKNLTI--GRLCR-----------------QQTIT-----AVNG-----------SLPGPTIRVQEGDTL 66 (568)
Q Consensus 22 ~~~~~~~~~~~~~~~~--~~~G~-----------------~~~~~-----~~NG-----------~~pGP~i~v~~Gd~v 66 (568)
.+.+|+|.|.+++... +++|. ...++ +|++ ++|||+||+++||+|
T Consensus 130 ~g~~r~y~i~a~e~~wdyap~~~~~~~~~~~~~~~g~~y~k~~~~~y~~~~f~~~~~~~~~~~~l~~pGP~Ir~~~GD~v 209 (770)
T 2r7e_B 130 QKKTRHYFIAAVERLWDYGMSSSPHVLRNRAQSGSVPQFKKVVFQEFTDGSFTQPLYRGELNEHLGLLGPYIRAEVEDNI 209 (770)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCTTTTSSCCCCCCCCCCCEEEEECSSSCTTTTCCCCSTTTTCCSCCCCCCCCSSSCE
T ss_pred CCCEEEEEEEEEEEEEeecCCCcccccccccccccccceeeEEEEEeccCceeccccccccccccCCCCCeEEEEcCCEE
Confidence 6789999999999873 55542 12222 3333 689999999999999
Q ss_pred EEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCC---------CCCceeEecChhhhh--h-
Q 008366 67 IVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIIN---------QEGTLWWHAHISMLR--A- 134 (568)
Q Consensus 67 ~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~---------~~Gt~~YH~h~~~~~--~- 134 (568)
+|+|+|.++++++|||||+++..... ||+++ +||+|+||++++|+|++++ ++||||||||.+... .
T Consensus 210 ~v~~~N~l~~~~siH~HG~~~~~~~~-dG~~~-~~~~I~PG~~~tY~f~~~~~~gp~~~d~~~Gt~wYHsh~~~~~q~~~ 287 (770)
T 2r7e_B 210 MVTFRNQASRPYSFYSSLISYEEDQR-QGAEP-RKNFVKPNETKTYFWKVQHHMAPTKDEFDCKAWAYSSDVDLEKDVHS 287 (770)
T ss_dssp EEEEECCSSSCCCCCBTTCCCCCCSS-SCTTT-TSSCCCSSCEEEEECCCCSSSSCCSSCCSEEEEEECCCSSSSHHHHT
T ss_pred EEEEEECCCCCcceeecccccccccC-CCCcC-ccCccCCCCeEEEEEEecCccCCccCCCCCeeEEeeccCCcHHHHhC
Confidence 99999999999999999999988763 69988 8999999999999999853 899999999998743 3
Q ss_pred cceEEEEEecCCCCCC--CCCCCCCceeEEEee------cccCcHHHHHhh-c--ccc--CCCCCCCceEEEcCCCCCCC
Q 008366 135 TVHGAFIIRPKSGHKY--PFPKPDKEVPIVLGE------WWNDDIMDVANR-G--EIT--GVGPRISDAFTINGMPGDLY 201 (568)
Q Consensus 135 Gl~G~liV~~~~~~~~--~~~~~~~e~~l~~~d------~~~~~~~~~~~~-~--~~~--g~~~~~~~~~~iNG~~g~~~ 201 (568)
||+|+|||+++..... .....++|++|++.+ |+.+........ . ... .......++++|||+.+.
T Consensus 288 GL~G~liV~~~~~~~~~~~~~~~d~E~vl~~~~~de~~swy~~~~~~~~~~~p~~~~~~d~~~~~~~~~~~ING~~~~-- 365 (770)
T 2r7e_B 288 GLIGPLLVCHTNTLNPAHGRQVTVQEFALFFTIFDETKSWYFTENMERNCRAPCNIQMEDPTFKENYRFHAINGYIMD-- 365 (770)
T ss_dssp SCCEEEEEECSTTSCSSSCCCCSSEEEECCCCEECCSSSSCTTGGGSSCSCCSSCCCSSSSSSTTTSCEECTTSCTTT--
T ss_pred CceeeEEECCCcccccccCCCccceEEEEEEeecCccccchhccchhhcccCccccccCCccccccCCccccCCccCC--
Confidence 9999999998764321 122457899888753 554432100000 0 000 000123457899999541
Q ss_pred CCCCCceeEEEEEcCcEEEEEEEeccCCC-eEEEEEcCceeEEEEecCCCCCcEEEeEEEECCCceEEEEEEeCCCCcee
Q 008366 202 PCSENQTYKLKVEKGKTYLLRIINAALNN-QLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSY 280 (568)
Q Consensus 202 ~~~~~~~~~l~v~~G~~~rlRliN~~~~~-~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pg~r~dv~~~~~~~~g~y 280 (568)
..+.+++++|++|||||+|++... .+.||||||.|+|++.||. .+|++.|.||||++|+|+++ +||.|
T Consensus 366 -----~~~~l~v~~Ge~vr~rliN~g~~~~~H~fHlhGh~f~Vv~~dg~-----~~Dtv~l~Pg~~~~v~~~ad-~pG~w 434 (770)
T 2r7e_B 366 -----TLPGLVMAQDQRIRWYLLSMGSNENIHSIHFSGHVFTVRKKEEY-----KMALYNLYPGVFETVEMLPS-KAGIW 434 (770)
T ss_dssp -----TCCCCCCCSSSCEEEECCCCCSSSCCCEEEBSSCCEECCSSSCC-----EESEEECCTTCCCEEEECCS-SCBCC
T ss_pred -----CCCCeEEeCCCEEEEEEEeCCCCcceEEEEEcCCEEEEEecCCc-----eeeEEEECCCeEEEEEEEeC-CCCce
Confidence 346789999999999999998653 6779999999999999873 88999999999999999999 79999
Q ss_pred EEEEeeccCCC
Q 008366 281 YMAARAYAAPP 291 (568)
Q Consensus 281 ~~~~~~~~~~~ 291 (568)
++|||...+..
T Consensus 435 ~~hcH~~~H~~ 445 (770)
T 2r7e_B 435 RVECLIGEHLH 445 (770)
T ss_dssp CBCCCSHHHHT
T ss_pred EEEeccccccc
Confidence 99999876544
No 38
>2r7e_A Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_A*
Probab=100.00 E-value=3.1e-36 Score=336.24 Aligned_cols=222 Identities=20% Similarity=0.279 Sum_probs=171.3
Q ss_pred CCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCC-----CCCCcccccCCCCCeEEEEEEeCCCCC-----
Q 008366 52 SLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWAD-----GPNMITQCPIRPGNSYTYKFRIINQEG----- 121 (568)
Q Consensus 52 ~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~D-----G~~~~~~~~i~PG~~~~y~f~~~~~~G----- 121 (568)
.+|||+||+++||+|+|+|+|.++++++|||||+.+. ..|+| |+++++||+|.||++++|+|++++++|
T Consensus 448 g~pGP~Ir~~~GD~v~v~~~N~l~~~~siHwHGl~~~-~~~~DG~~~~G~~~~~~~~I~PG~t~tY~f~~~~~agPg~~d 526 (742)
T 2r7e_A 448 GILGPLLYGEVGDTLLIIFKNQASRPYNIYPHGITDV-RPLYSRRLPKGVKHLKDFPILPGEIFKYKWTVTVEDGPTKSD 526 (742)
T ss_dssp CSCCCCCCCBTTCEEECCEECCSSSCBCCEETTCSEE-CCTTCSCCSSSCSSTTTSCCBSSCEECCEEECCSTTSCCSSS
T ss_pred CCCCCeEEEECCCEEEEEEEeCCCCCcCEEecccccC-CcccccccCCCCcccccccCCCCCeEEEEEEeccccCCcccC
Confidence 6799999999999999999999999999999999974 45566 566778999999999999999965444
Q ss_pred ----ceeEecChhhhhh---cceEEEEEecCCCC-CCC-CCCCCCceeEEEee------cccCcHHHHHhhccccCC--C
Q 008366 122 ----TLWWHAHISMLRA---TVHGAFIIRPKSGH-KYP-FPKPDKEVPIVLGE------WWNDDIMDVANRGEITGV--G 184 (568)
Q Consensus 122 ----t~~YH~h~~~~~~---Gl~G~liV~~~~~~-~~~-~~~~~~e~~l~~~d------~~~~~~~~~~~~~~~~g~--~ 184 (568)
|||||||.+..++ ||+|+|||+++... +.. ....|+|++|++++ |+.......... ..... .
T Consensus 527 ~~~gT~wYHsH~~~~~q~~~GL~G~lIV~~~~~~~~~~~~~~~d~E~~l~~~~fde~~~wy~~~~~~~~~~-~p~~v~~~ 605 (742)
T 2r7e_A 527 PRCLTRYYSSFVNMERDLASGLIGPLLICYKESVDQRGNQIMSDKRNVILFSVFDENRSWYLTENIQRFLP-NPAGVQLE 605 (742)
T ss_dssp CSCCCCEEECCSSSSSTGGGSCCEECCCBCCCSCCCCCCSSCCSCCCEEEECBCCGGGSSCSHHHHHHHSS-SSSCSCCC
T ss_pred CCceEEEEecCcchhhhhhccceeeEEEcCccccccccCcCCCCceEEEEeeccccccccccccchhhccc-Cchhcccc
Confidence 9999999987653 99999999987532 111 12568999999964 544322111100 00000 0
Q ss_pred ----CCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCC-CeEEEEEcCceeEEEEecCCCCCcEEEeEE
Q 008366 185 ----PRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALN-NQLFFKIANHKFTVVAVDAGYTDPYVTDVV 259 (568)
Q Consensus 185 ----~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~~ 259 (568)
.....+++|||+.+. ..+ +.+++|++|||||+|++.. ..+.||||||.|+|+ +..+|++
T Consensus 606 ~~~~~~~~~~~~ING~~~~-------~~~-l~v~~Ge~vr~rliN~g~~~~~h~~HlhGh~f~v~--------~~~~Dtv 669 (742)
T 2r7e_A 606 DPEFQASNIMHSINGYVFD-------SLQ-LSVCLHEVAYWYILSIGAQTDFLSVFFSGYTFKHK--------MVYEDTL 669 (742)
T ss_dssp CHHHHGGGCCBCTTTTCSS-------CCC-CCCCSSCCCEEEEEECSSCCCCCCCEESSSCCCCB--------SSSBCSS
T ss_pred cccccccCceeeecCcCCC-------CCc-EEEeCCCEEEEEEEeCCCCcceEEEEEcCcEEEEe--------ccceeEE
Confidence 001235789999542 123 8999999999999998754 457899999999986 5678999
Q ss_pred EECCCceEEEEEEeCCCCceeEEEEeeccCCCC
Q 008366 260 VIAPGQTTDVLLKADQPVGSYYMAARAYAAPPP 292 (568)
Q Consensus 260 ~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~ 292 (568)
.|.||||++|+|+++ +||.|+++||...+...
T Consensus 670 ~l~Pg~~~~v~~~ad-~pG~w~~hcH~~~H~~~ 701 (742)
T 2r7e_A 670 TLFPFSGETVFMSME-NPGLWILGCHNSDFRNR 701 (742)
T ss_dssp CCCCCSSEECCEECC-CCCCSCCEECCCSTTHH
T ss_pred EECCCcEEEEEEEcC-CCeEEEEEeCCchHHhC
Confidence 999999999999999 79999999999887543
No 39
>3gdc_A Multicopper oxidase; beta sandwich, plasmid, oxidoreductase; 1.80A {Arthrobacter SP}
Probab=99.97 E-value=4.1e-30 Score=257.25 Aligned_cols=235 Identities=19% Similarity=0.192 Sum_probs=164.8
Q ss_pred CceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCCcEEEeEEEECCCceE
Q 008366 188 SDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTT 267 (568)
Q Consensus 188 ~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pg~r~ 267 (568)
...+++||+. ..|.|+++.|+++++|+.|.... .+++|+||.. ..+.||.+.. ++..|.||+++
T Consensus 54 ~~~~~~ng~~---------pgP~i~~~~Gd~v~v~~~N~~~~-~~~iH~HG~~--~~~~DG~p~~----~~~~i~PG~~~ 117 (288)
T 3gdc_A 54 FKGWSYNGRI---------PGPTLWAREGDALRIHFTNAGAH-PHTIHFHGVH--RATMDGTPGI----GAGSIAPGQSF 117 (288)
T ss_dssp EEEEEETTBS---------SCCEEEEETTCEEEEEEEECSSS-CBCCEESSCC--CGGGSCCTTS----TTCSBCTTCEE
T ss_pred EEEEEECCcc---------CCCcEEEeCCCEEEEEEEeCCCC-cccEEecccc--ccccCCCCCc----cceeECCCCEE
Confidence 4589999993 45899999999999999999855 4569999976 4578987542 33568999999
Q ss_pred EEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccCccCCCCCCCC
Q 008366 268 DVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWV 347 (568)
Q Consensus 268 dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 347 (568)
+..++++ .+|.||+|||...... ....+ ..+.|.++.... .+
T Consensus 118 ~y~f~~~-~~Gt~~yH~H~~~~~~---~~~~G--l~G~liV~~~~~----~~---------------------------- 159 (288)
T 3gdc_A 118 TYEFDAT-PFGTHLYHCHQSPLAP---HIAKG--LYGGFIVEPKEG----RP---------------------------- 159 (288)
T ss_dssp EEEEECC-SCEEEEEECCCSSHHH---HHHTT--CEEEEEEECSSC----CC----------------------------
T ss_pred EEEEEcC-CCccEEEEecCcchHH---HHhCc--CeEEEEEeCCcc----CC----------------------------
Confidence 9999997 7999999999752100 01112 223333332111 00
Q ss_pred CCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCCCCCcccccCC
Q 008366 348 PCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPNQPPVEFDYTN 427 (568)
Q Consensus 348 ~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~ 427 (568)
..|+.+.+.+.- .... . ....-.|.+||+.|...
T Consensus 160 ----~~d~e~~l~~~d--~~~~-----~--g~~~~~~~iNG~~~~~~--------------------------------- 193 (288)
T 3gdc_A 160 ----PADDEMVMVMNG--YNTD-----G--GDDNEFYSVNGLPFHFM--------------------------------- 193 (288)
T ss_dssp ----CCSEEEEEEEEE--ECCS-----S--TTCCSEEEETTSTTHHH---------------------------------
T ss_pred ----CCcceEEEEEee--EecC-----C--CCCcceEEECccccccc---------------------------------
Confidence 112233222210 0000 0 01122577887654210
Q ss_pred CCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceee
Q 008366 428 TNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNT 507 (568)
Q Consensus 428 ~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDT 507 (568)
...+.++.|++|+|.+.|.+. ....||||||||.|+|++.+. .+..+.++||
T Consensus 194 ---------------~~~l~v~~Ge~vr~~l~N~g~-~~~~H~fHlhG~~f~v~~~g~------------~~~~~~~~Dt 245 (288)
T 3gdc_A 194 ---------------DFPVKVKQHELVRIHLINVLE-YDPINSFHIHGNFFHYYPTGT------------MLTPSEYTDT 245 (288)
T ss_dssp ---------------HSCEEEETTCCEEEEEEECCC-SSSEEEEEETTCCEEEEETTC------------CSSCSEEESE
T ss_pred ---------------CcccccCCCCEEEEEEEeCCC-CCcceeEEEcCCEEEEEcCCC------------ccCCCceeeE
Confidence 023578899999999999763 124699999999999987532 1234579999
Q ss_pred EEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEec
Q 008366 508 IAVPIGGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVEN 550 (568)
Q Consensus 508 v~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 550 (568)
+.|+|++.+.|+|++++||.|+||||+++|++.|||+.|+|.+
T Consensus 246 v~v~pg~~~~v~~~~~~pG~~~~hCH~~~H~~~GM~~~~~V~~ 288 (288)
T 3gdc_A 246 ISQVQGQRGILELRFPYPGKFMFHAHKTEFAELGWMGFFEVSA 288 (288)
T ss_dssp EEEETTCEEEEEECCCSCEEEEEECSSHHHHTTTCEEEEEEEC
T ss_pred EEeCCCceEEEEEECCCCEEEEEEecChHHHhcCCCEEEEEeC
Confidence 9999999999999999999999999999999999999999973
No 40
>3cg8_A Laccase; oxidoreductase, multicopper blue protein; HET: PG4; 2.68A {Streptomyces coelicolor}
Probab=99.96 E-value=9.2e-29 Score=252.90 Aligned_cols=219 Identities=16% Similarity=0.190 Sum_probs=156.3
Q ss_pred ceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCCcEEEeEEEECCCceEEEEEEeCCC----------
Q 008366 207 QTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQP---------- 276 (568)
Q Consensus 207 ~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pg~r~dv~~~~~~~---------- 276 (568)
..|+|+++.|+++|+||+|..... +++|.||..+. .+.||.++ +...|.||++++..+++++.
T Consensus 75 pGP~I~v~~Gd~v~v~~~N~l~~~-~sih~HG~~~~-~~~DG~~~-----t~~~I~PG~~~~y~f~~~~pg~~~~g~~~~ 147 (343)
T 3cg8_A 75 PGPLIEVNEGDTLHIEFTNTMDVR-ASLHVHGLDYE-ISSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 147 (343)
T ss_dssp SCCCEEEETTCEEEEEEEECSSSC-BCCEESSSBCC-GGGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCEEEEECCCEEEEEEEECCCCC-eeEEecCcccC-CcCCCccc-----ccccccCCCEEEEEEEeCCCCcccccccCC
Confidence 458999999999999999999654 45999998877 68899864 23468899999999998742
Q ss_pred --CceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccCccCCCCCCCCCCCCCCc
Q 008366 277 --VGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVD 354 (568)
Q Consensus 277 --~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~d 354 (568)
.|.|++++|.............+..+..+|+..+. + ..|
T Consensus 148 ~~~Gt~~YH~h~~~~~~~~~~~~~Gl~G~~iV~~~~~-------~--------------------------------~pd 188 (343)
T 3cg8_A 148 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVRRKGD-------V--------------------------------LPD 188 (343)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEECTTC-------C--------------------------------CCS
T ss_pred CCceEEEEecCccccccchhhhhcCCeEEEEEecCCC-------C--------------------------------CCC
Confidence 37899999853211000001122334444433221 0 012
Q ss_pred eEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCCCCCcccccCCCCCCCCc
Q 008366 355 ERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPNQPPVEFDYTNTNVSNDM 434 (568)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 434 (568)
+.+.+.+. .|.+||+.+ +
T Consensus 189 ~e~~l~~~--------------------d~~iNG~~~--~---------------------------------------- 206 (343)
T 3cg8_A 189 ATHTIVFN--------------------DMTINNRKP--H---------------------------------------- 206 (343)
T ss_dssp EEEEEEEE--------------------TTEETTCCT--T----------------------------------------
T ss_pred ceEEEEcc--------------------cceecccCC--C----------------------------------------
Confidence 23332221 257777543 1
Q ss_pred cccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCc
Q 008366 435 SLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGG 514 (568)
Q Consensus 435 ~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g 514 (568)
..+.+.++.|++|+|+|.|.+. ..||||||||.|+|+.. |.+.. ....+.++||+.|+|++
T Consensus 207 -------~~~~l~v~~Ge~vri~l~N~g~---~~HpfHlHGh~f~v~~~--G~~~~-------p~~~~~~~Dtv~v~PG~ 267 (343)
T 3cg8_A 207 -------TGPDFEATVGDRVEIVMITHGE---YYHTFHMHGHRWADNRT--GILTG-------PDDPSRVIDNKITGPAD 267 (343)
T ss_dssp -------CCCCEEEETTCEEEEEEEEESS---CCEEEEETTCCEESSSS--SSCCS-------TTCCCCEESEEEECTTC
T ss_pred -------CCccEEeCCCCEEEEEEEcCCc---cccccEecCcEEEEecc--CcccC-------CCCcccceeeEEeCCCC
Confidence 0145689999999999999875 89999999999999632 22211 11235789999999999
Q ss_pred EEEEEEEe---cCceeEEEEeecccccccccEEEEEEecCC
Q 008366 515 WAVIRFRA---NNPGVWFMHCHFDVHLPWGLATTFIVENGP 552 (568)
Q Consensus 515 ~~~irf~a---dnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 552 (568)
++.++|++ ++||.|+||||+++|++.|||++|+|.+..
T Consensus 268 ~~~v~~~~~~~~~pG~w~~HCHi~~H~~~GM~g~~~V~~~~ 308 (343)
T 3cg8_A 268 SFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPD 308 (343)
T ss_dssp EEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred EEEEEEEECCCCCCeeEEEeCCCHHHHhccCcEEEEEecCC
Confidence 99999995 799999999999999999999999998643
No 41
>3g5w_A Multicopper oxidase type 1; two domain, laccase, nitrifier, metal B protein; 1.90A {Nitrosomonas europaea}
Probab=99.96 E-value=2.2e-28 Score=247.70 Aligned_cols=248 Identities=19% Similarity=0.202 Sum_probs=165.0
Q ss_pred ceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEE-EEecCCCCCcEEEeEEEECCCceE
Q 008366 189 DAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTV-VAVDAGYTDPYVTDVVVIAPGQTT 267 (568)
Q Consensus 189 ~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v-ia~DG~~~~p~~~d~~~l~pg~r~ 267 (568)
..+++||+. ..|+|+++.|+++++|+.|.... ..++|+||....- .+.||.+.. ....|.||+++
T Consensus 23 ~~~~~ng~~---------pGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~~~~~DG~p~~----t~~~i~PG~~~ 88 (318)
T 3g5w_A 23 HTFAFNGQV---------PAPLIHVMEGDDVTVNVTNMTTL-PHTIHWHGMLQRGTWQSDGVPHA----TQHAIEPGDTF 88 (318)
T ss_dssp EEEEETTBS---------SCCEEEEETTCEEEEEEEECSSS-CBCCEEETCCCTTCGGGSCCBTT----TBCCBCTTCEE
T ss_pred EEEEECCcc---------CCceEEEeCCCEEEEEEEeCCCC-ceeEEecCcCCCCCcccCCCccc----ccccCCCCCEE
Confidence 579999993 45899999999999999999854 5579999986543 367887531 23578999999
Q ss_pred EEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccCccCCCCCCCC
Q 008366 268 DVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWV 347 (568)
Q Consensus 268 dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 347 (568)
+..++++ .+|+||+|||...... ....+..+.-+| ..... ..++
T Consensus 89 ~y~f~~~-~~Gt~wYH~H~~~~~~---~~~~Gl~G~lIV--~~~~~--~~~~---------------------------- 132 (318)
T 3g5w_A 89 TYKFKAE-PAGTMWYHCHVNVNEH---VTMRGMWGPLIV--EPKNP--LPIE---------------------------- 132 (318)
T ss_dssp EEEEECC-SCEEEEEECCSSHHHH---HHHSCCEEEEEE--ECSSC--CHHH----------------------------
T ss_pred EEEEEcC-CCEEEEEEccCChhhh---hccCCCEEEEEE--cCCCc--cccc----------------------------
Confidence 9999998 7899999999732110 001222333333 32111 0000
Q ss_pred CCCCCCceEEEEEEc-cCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCCCCCcccccC
Q 008366 348 PCPRRVDERMFVTVG-LGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPNQPPVEFDYT 426 (568)
Q Consensus 348 ~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~ 426 (568)
...|+.+.+.+. ..............+....-.|.+||+.| |
T Consensus 133 ---~~~d~e~~l~l~dw~~~~~~~~~~~~~~~~~~d~~~ING~~~--~-------------------------------- 175 (318)
T 3g5w_A 133 ---KTVTKDYILMLSDWVSSWANKPGEGGIPGDVFDYYTINAKSF--P-------------------------------- 175 (318)
T ss_dssp ---HTCCEEEEEEEEEECGGGTTCTTCCCCTTCCCCEEEETTBCB--T--------------------------------
T ss_pred ---ccccceeEEEEEeeccccccccccCCCCCCcCcEEEEcCcCC--C--------------------------------
Confidence 011222221111 00000000000000000112466776643 1
Q ss_pred CCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCcee
Q 008366 427 NTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRN 506 (568)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rD 506 (568)
....+.++.|++++|+|.|.+. ..||||||||.|+|++... . .+.+|.++|
T Consensus 176 ---------------~~~~l~v~~G~~vrlrliN~~~---~~h~~hlhGh~f~vi~~dG---------~--~~~~p~~~d 226 (318)
T 3g5w_A 176 ---------------ETQPIRVKKGDVIRLRLIGAGD---HVHAIHTHGHISQIAFKDG---------F--PLDKPIKGD 226 (318)
T ss_dssp ---------------SSCCEEECTTCEEEEEEEECSS---SCEEEEETTSCEEEEEETT---------E--EEEEEEEES
T ss_pred ---------------CCccEEeCCCCEEEEEEEeCCC---ceEEEEECCcEEEEEecCC---------c--ccCCCcccc
Confidence 0134678999999999999875 6899999999999999842 1 123577899
Q ss_pred eEEeCCCcEEEEEEEecCceeEEEEeecccccc------cccEEEEEEecCC
Q 008366 507 TIAVPIGGWAVIRFRANNPGVWFMHCHFDVHLP------WGLATTFIVENGP 552 (568)
Q Consensus 507 Tv~vp~~g~~~irf~adnpG~w~~HCHil~H~d------~GM~~~~~V~~~~ 552 (568)
|+.|+|++++.|+|++++||.|+||||+++|++ .|||..|+|...+
T Consensus 227 tv~l~pger~~v~~~a~~pG~w~~hCH~~~H~~~g~~~~~Gm~~~i~~~g~~ 278 (318)
T 3g5w_A 227 TVLIGPGERYDVILNMDNPGLWMIHDHVDTHTTNGDKPDGGIMTTIEYEEVG 278 (318)
T ss_dssp EEEECTTCEEEEEEECCSCSEEEEEESSGGGSCBTTBSSCBSEEEEEETTTC
T ss_pred EEEECCCCEEEEEEECCCCeeEEEEeccHHHhhccCcCCCCCEEEEEECCCC
Confidence 999999999999999999999999999999998 6899999987643
No 42
>3kw8_A Laccase, putative copper oxidase; two-domain laccase, oxidoreductase, multicopper blue protein; HET: PG4 PGE; 2.29A {Streptomyces coelicolor} PDB: 4gxf_A* 4gy4_A*
Probab=99.95 E-value=7.4e-28 Score=239.33 Aligned_cols=220 Identities=16% Similarity=0.197 Sum_probs=157.7
Q ss_pred ceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCCcEEEeEEEECCCceEEEEEEeCCC----------
Q 008366 207 QTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQP---------- 276 (568)
Q Consensus 207 ~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pg~r~dv~~~~~~~---------- 276 (568)
..|+|+++.|+++++++.|.. ....++|.||..+.. +.||..+ ..-.|.||+++...++++++
T Consensus 34 pGP~i~~~~Gd~v~v~~~N~~-~~~~siH~HG~~~~~-~~DG~~~-----t~~~i~pG~~~~Y~f~~~~~~~~~~g~~~~ 106 (276)
T 3kw8_A 34 PGPLIEVNEGDTLHIEFTNTM-DVRASLHVHGLDYEI-SSDGTAM-----NKSDVEPGGTRTYTWRTHKPGRRDDGTWRP 106 (276)
T ss_dssp SCCCEEEETTCEEEEEEEECS-SSCBCCEESSSBCCG-GGSCCTT-----TTCSBCTTCEEEEEEECCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECC-CCCccEeecCcccCC-ccCCCcC-----CcCCCCCCCEEEEEEEcCCccccccCccCC
Confidence 569999999999999999997 455679999987754 6799762 23467899999999999752
Q ss_pred --CceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccCccCCCCCCCCCCCCCCc
Q 008366 277 --VGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVD 354 (568)
Q Consensus 277 --~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~d 354 (568)
+|.||+|||.............+..+..+|. .... + ..|
T Consensus 107 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~--~~~~-----~--------------------------------~~d 147 (276)
T 3kw8_A 107 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVR--RKGD-----V--------------------------------LPD 147 (276)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEE--CTTC-----C--------------------------------CCS
T ss_pred CCCEEEEEecCccccccchhhhhCccEEEEEEe--cCCC-----c--------------------------------ccc
Confidence 5899999997432100000111223333332 2111 0 013
Q ss_pred eEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCCCCCcccccCCCCCCCCc
Q 008366 355 ERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPNQPPVEFDYTNTNVSNDM 434 (568)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 434 (568)
+.+.+.+. .|.|||+.|.
T Consensus 148 rE~~l~l~--------------------~~~iNG~~~~------------------------------------------ 165 (276)
T 3kw8_A 148 ATHTIVFN--------------------DMTINNRKPH------------------------------------------ 165 (276)
T ss_dssp EEEEEEEE--------------------TTEETTCCTT------------------------------------------
T ss_pred cceEEEec--------------------ccccceeccc------------------------------------------
Confidence 33333221 2577876441
Q ss_pred cccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCc
Q 008366 435 SLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGG 514 (568)
Q Consensus 435 ~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g 514 (568)
..+.++++.|++|+|+|.|.+. +.||||||||.|++++. |.++. ....+.+|||+.|+|++
T Consensus 166 -------~~p~i~v~~G~~vri~l~N~~~---~~Hp~HlHG~~f~v~~~--G~~~~-------p~~~~~~~Dtv~v~pg~ 226 (276)
T 3kw8_A 166 -------TGPDFEATVGDRVEIVMITHGE---YYHTFHMHGHRWADNRT--GILTG-------PDDPSRVIDNKITGPAD 226 (276)
T ss_dssp -------CCCCEEEETTCEEEEEEEEESS---CCEEEEETTCCEESSSS--SSCCS-------TTCCCCEESEEEECTTC
T ss_pred -------CCCCEEEecCCEEEEEEecCCC---cceeEEEccceeEEecc--CccCC-------CcccccCCccEEeCCCc
Confidence 1155689999999999999765 89999999999998753 32221 11234689999999999
Q ss_pred EEEEEEEec---CceeEEEEeecccccccccEEEEEEecCCC
Q 008366 515 WAVIRFRAN---NPGVWFMHCHFDVHLPWGLATTFIVENGPT 553 (568)
Q Consensus 515 ~~~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~~~~~ 553 (568)
.+.++|+++ |||.|+||||+++|++.|||+.|+|.++++
T Consensus 227 ~~~~~~~~~~~~npG~w~~HCH~~~H~~~GM~g~~~V~~~~~ 268 (276)
T 3kw8_A 227 SFGFQIIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 268 (276)
T ss_dssp EEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTS
T ss_pred eEEEEEEeccCCCCCeEEEECCCchHhhCCCeEEEEEeCCCC
Confidence 999999997 899999999999999999999999997654
No 43
>3t9w_A Small laccase, multi-copper oxidase; two-domain copper oxidase, Cu-binding, oxidoreducta; 1.50A {Amycolatopsis SP}
Probab=99.95 E-value=5.1e-28 Score=242.89 Aligned_cols=219 Identities=19% Similarity=0.244 Sum_probs=152.4
Q ss_pred ceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCCcEEEeEEEECCCceEEEEEEeCC-----------
Q 008366 207 QTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQ----------- 275 (568)
Q Consensus 207 ~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pg~r~dv~~~~~~----------- 275 (568)
+.|+|+++.|++++++|.|.... ..++|.||..+.. +.||.++.. -.|.||++++..+++++
T Consensus 56 PGP~i~~~~GD~v~v~~~N~l~~-~~siH~HG~~~~~-~~DG~~~~~-----~~i~PG~t~~Y~~~~~~~~~~~~~~~~~ 128 (299)
T 3t9w_A 56 PGPVLEMWEGDTLEIDLVNTTDR-VLSLHPHGVDYDV-NSDGTLMNG-----SAVMPGQTRRYTWRSHVGYRRADGSWAE 128 (299)
T ss_dssp SCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCCTTTT-----CCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCceEEEECCeEEEEEEEECCCC-CccEEeCCcccCC-ccCCCcccc-----CccCCCCeEEEEEEeecccccCCCcCCC
Confidence 56999999999999999999754 5579999987653 678976421 24789999999998752
Q ss_pred -CCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccCccCCCCCCCCCCCCCCc
Q 008366 276 -PVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVD 354 (568)
Q Consensus 276 -~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~d 354 (568)
.+|.||+|||.............+..+..||. .... + ..|
T Consensus 129 ~~~gt~~YH~H~~~~~~~~~~~~~GL~G~liV~--~~~~-----~--------------------------------~~d 169 (299)
T 3t9w_A 129 GTAGYWHYHDHAMGTEHGTEGVLKGLYGALVVR--RQGD-----L--------------------------------LPK 169 (299)
T ss_dssp CCCEEEEEECSSSSSTTCHHHHHHTCEEEEEEE--CTTC-----C--------------------------------CCS
T ss_pred CCceeEEEecCCcccccchhhhcccccceEEEe--cccc-----c--------------------------------Ccc
Confidence 45999999986442211000111223333332 2100 0 113
Q ss_pred eEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCCCCCcccccCCCCCCCCc
Q 008366 355 ERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPNQPPVEFDYTNTNVSNDM 434 (568)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 434 (568)
+.+.+.+. .|.+|+..+
T Consensus 170 ~e~~l~~~--------------------~~~~Ng~~~------------------------------------------- 186 (299)
T 3t9w_A 170 RQFTVVFN--------------------DMMINNRAH------------------------------------------- 186 (299)
T ss_dssp EEEEEEEE--------------------TTEETTCCT-------------------------------------------
T ss_pred ccceeeee--------------------eeeecCccc-------------------------------------------
Confidence 33333321 245555432
Q ss_pred cccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCc
Q 008366 435 SLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGG 514 (568)
Q Consensus 435 ~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g 514 (568)
...+.+.++.|++|+|+|.|.+. ..||||||||.|+|+..+. .......+.++||+.|.|+.
T Consensus 187 ------~~~p~l~v~~Ge~Vr~~liN~~~---~~HpfHlHGh~F~v~~~g~---------~~~~~~~~~~~Dtv~v~PGe 248 (299)
T 3t9w_A 187 ------HDAPTFEANLGERVEWIAIGHGS---NFHTFHLHGHRWLDNRTGM---------RTSEYDPSPLIDIKDLNPGV 248 (299)
T ss_dssp ------TCCCEEEEETTCEEEEEEEEESS---CCCEEEETTCCEESSSSSS---------CCSTTCCCCEESEEECCTTC
T ss_pred ------cccccceecCCCEEEEEEEeccc---cceeeeEecceEEEEeccc---------ccCCcCCCCceeeEEeCCce
Confidence 11256788999999999999775 8899999999999887642 22223445689999999986
Q ss_pred EE---EEEEEecCceeEEEEeecccccccccEEEEEEecCC
Q 008366 515 WA---VIRFRANNPGVWFMHCHFDVHLPWGLATTFIVENGP 552 (568)
Q Consensus 515 ~~---~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~~ 552 (568)
.. +++|+++|||.|+||||+++|++.|||++|+|++.+
T Consensus 249 ~~~~~via~~~dnPG~w~~HCHi~~H~~~GM~~~f~V~~~~ 289 (299)
T 3t9w_A 249 SFGFQVIAGEGVGPGMWMYHCHVQNHSDMGMAGMFLVRNAD 289 (299)
T ss_dssp EEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTT
T ss_pred eEEEEEEEeeCCCCeeEEEEcCCHHHHhcCCeEEEEEECCC
Confidence 54 455667899999999999999999999999998654
No 44
>2zwn_A Two-domain type laccase; muticopper oxidase, oxidoreductase; 1.70A {Metagenomes}
Probab=99.95 E-value=1.2e-27 Score=244.78 Aligned_cols=246 Identities=20% Similarity=0.203 Sum_probs=160.3
Q ss_pred CceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEE---ecCCCCCcEEEeEEEECCC
Q 008366 188 SDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVA---VDAGYTDPYVTDVVVIAPG 264 (568)
Q Consensus 188 ~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via---~DG~~~~p~~~d~~~l~pg 264 (568)
...+++||+. ..|+|++++|+++|+||+|.... ..++|.|| +.+.+ .||.+. +.+..|.||
T Consensus 23 ~~~~~~NG~~---------pGP~I~v~~Gd~v~v~v~N~l~~-~~siH~HG--~~~~~~~~~DGvp~----vtq~~I~PG 86 (339)
T 2zwn_A 23 YKVFGFNGQV---------PGPLIHVQEGDDVIVNVTNNTSL-PHTIHWHG--VHQKGTWRSDGVPG----VTQQPIEAG 86 (339)
T ss_dssp EEEEEETTBS---------SCCEEEEETTCEEEEEEEEESSS-CBCCEEET--CCCTTCGGGSCCBT----TTBCCBCTT
T ss_pred EEEEEECCcc---------CCCeEEEECCCEEEEEEEECCCC-CccEEeCC--CCcCCCcccCCCCc----cccCccCCC
Confidence 4579999993 45899999999999999999854 34466655 44555 499753 234568999
Q ss_pred ceEEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccCccCCCCC
Q 008366 265 QTTDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGP 344 (568)
Q Consensus 265 ~r~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~ 344 (568)
||+++.|+++ .+|+||+|||....... ...+..+..++ ..... ..++
T Consensus 87 ~~~~y~f~~~-~~Gt~wyH~H~~~~~q~---~~~Gl~G~liV--~p~~~--~~~~------------------------- 133 (339)
T 2zwn_A 87 DSYTYKFKAD-RIGTLWYHCHVNVNEHV---GVRGMWGPLIV--DPKQP--LPIE------------------------- 133 (339)
T ss_dssp CEEEEEEECC-SCEEEEEECCSSHHHHT---TTSCCEEEEEE--ECSSC--CTTG-------------------------
T ss_pred CeEEEEEECC-CCEEEEEEecCCchhhh---hcCCceEeEEe--cCCCc--cccc-------------------------
Confidence 9999999998 68999999996321000 00122233333 22111 0000
Q ss_pred CCCCCCCCCceEEEEEEc-cCcccCCCCCcccCCCC-CceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCCCCCcc
Q 008366 345 QWVPCPRRVDERMFVTVG-LGLEQCPANATCQGPFS-QRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPNQPPVE 422 (568)
Q Consensus 345 ~~~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~ 422 (568)
...|+.+.+.+. ....... .....+... ..-.|.+||+.+
T Consensus 134 ------~~~d~e~~l~l~d~~~~~~~-~~~~~g~~~~~~~~~~ING~~~------------------------------- 175 (339)
T 2zwn_A 134 ------KRVTKDVIMMMSTWESAVAD-KYGEGGTPMNVADYFSVNAKSF------------------------------- 175 (339)
T ss_dssp ------GGCSEEEEEEEEEECGGGTT-CTTCCCSTTSCCCEEEETTBCT-------------------------------
T ss_pred ------ccCCceEEEEeeheeccccc-ccCCCCCCccccceEEEccccC-------------------------------
Confidence 011222221111 0000000 000000000 112355555432
Q ss_pred cccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCC
Q 008366 423 FDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNP 502 (568)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p 502 (568)
.....+.++.|++++|+|.|.+. ..||||||||+|+|++.... ...+|
T Consensus 176 ------------------~~~~~~~v~~G~~vrlrliN~~~---~~h~~hlhGh~f~vi~~DG~-----------~~~~p 223 (339)
T 2zwn_A 176 ------------------PLTQPLRVKKGDVVKIRFFGAGG---GIHAMHSHGHDMLVTHKDGL-----------PLDSP 223 (339)
T ss_dssp ------------------TSSCCEEECTTCEEEEEEEECSS---SCEEEEETTCCEEEEEETTE-----------EEEEE
T ss_pred ------------------CCcccEEECCCCEEEEEEEeCCC---ceEEEEECCcEEEEEEeCCe-----------ecCCC
Confidence 11134678999999999999875 79999999999999998421 12247
Q ss_pred CceeeEEeCCCcEEEEEEEecCceeEEEEeecccc------cccccEEEEEEecCC
Q 008366 503 QRRNTIAVPIGGWAVIRFRANNPGVWFMHCHFDVH------LPWGLATTFIVENGP 552 (568)
Q Consensus 503 ~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H------~d~GM~~~~~V~~~~ 552 (568)
.++||+.|+||+++.|+|++++||.|++|||+++| ++.||++++.+....
T Consensus 224 ~~~dtv~l~pg~r~~v~~~~~~pG~w~~hch~~~H~~~~~~~~~gm~a~l~~~g~~ 279 (339)
T 2zwn_A 224 YYADTVLVSPGERYDVIIEADNPGRFIFHDHVDTHVTAGGKHPGGPITVIEYDGVP 279 (339)
T ss_dssp EEESEEEECTTCEEEEEEECCSCSEEEEEECCGGGSCBTTBSSCSSEEEEEETTSC
T ss_pred cEEEEEEECCCCEEEEEEEeCCCeeEEEEEechhhcccccccCCCcEEEEEECCCC
Confidence 78999999999999999999999999999999999 889999999987543
No 45
>3tas_A Small laccase, multi-copper oxidase; two-domain laccase, oxidoreductase, secreted; HET: PG4; 2.30A {Streptomyces viridosporus} PDB: 3tbb_A 3tbc_A*
Probab=99.95 E-value=2.2e-27 Score=240.12 Aligned_cols=220 Identities=16% Similarity=0.160 Sum_probs=152.9
Q ss_pred ceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCCcEEEeEEEECCCceEEEEEEeCC-----------
Q 008366 207 QTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQ----------- 275 (568)
Q Consensus 207 ~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pg~r~dv~~~~~~----------- 275 (568)
+.|+|+++.|++++++|.|.... ..++|.||..+.. +.||.... .-.|.||++++..+++..
T Consensus 40 PGP~i~~~~Gd~v~v~~~N~l~~-~~siH~HG~~~~~-~~dG~~~~-----~~~i~PG~~~~Y~~~~~~P~~~~~~~~~~ 112 (313)
T 3tas_A 40 PGPLIELNEGDTLHIEFENTMDV-PVSLHVHGLDYEI-SSDGTKQS-----RSDVEPGGTRTYTWRTHVPGRRADGTWRA 112 (313)
T ss_dssp SCCCEEEETTCEEEEEEEECSSS-CBCCEESSSBCCG-GGSCSTTT-----TCCBCTTCEEEEEEBCCCCEECTTSCEEC
T ss_pred cCCeEEEECCCEEEEEEEECCCC-CccEeecCCcCCc-cCCCCccc-----cCCcCCCCEEEEEEEeccCCccccccccC
Confidence 56899999999999999999754 5579999987653 57887542 124789999999887652
Q ss_pred -CCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccCccCCCCCCCCCCCCCCc
Q 008366 276 -PVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRVD 354 (568)
Q Consensus 276 -~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~d 354 (568)
..|.||+|||.............+..+..||+ .... ...|
T Consensus 113 ~~~gt~~YH~h~~~~~~~~~~~~~Gl~G~liV~--~~~~-------------------------------------~~~d 153 (313)
T 3tas_A 113 GSAGYWHYHDHVVGTEHGTGGIRNGLYGPVIVR--RKGD-------------------------------------VLPD 153 (313)
T ss_dssp CSCEEEEEECSSSSSTTCHHHHHHTCEEEEEEE--CTTC-------------------------------------BCCS
T ss_pred CCceEEEEeecCcccccchhhhhccccCceEee--cccc-------------------------------------cccc
Confidence 35899999996432211000112223333332 2100 0123
Q ss_pred eEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCCCCCcccccCCCCCCCCc
Q 008366 355 ERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPNQPPVEFDYTNTNVSNDM 434 (568)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~ 434 (568)
+.+.+.+. .|++|+..+
T Consensus 154 ~e~~l~~~--------------------d~t~Ng~~~------------------------------------------- 170 (313)
T 3tas_A 154 RTHTIVFN--------------------DMTINNRPA------------------------------------------- 170 (313)
T ss_dssp EEEEEEEE--------------------TTEETTCCT-------------------------------------------
T ss_pred ccceeecc--------------------chhcccCCc-------------------------------------------
Confidence 34433321 245665422
Q ss_pred cccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCc
Q 008366 435 SLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGG 514 (568)
Q Consensus 435 ~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g 514 (568)
...+.+.++.|++|+|+|.|.+. ..||||||||.|+|+..+. .......+.++||+.|.|++
T Consensus 171 ------~~~~~l~v~~Ge~vr~~liN~g~---~~hpfHlHGh~F~v~~~~~---------~~~~~~~~~~~Dtv~l~Pge 232 (313)
T 3tas_A 171 ------HTGPDFEATVGDRVEFVMITHGE---YYHTFHLHGHRWADNRTGM---------LTGPDDPSQVIDNKICGPAD 232 (313)
T ss_dssp ------TCCCCEEEETTCEEEEEEEEESS---CCEEEEETTCCEESSTTSS---------CCSTTCCCCEESEEEECTTC
T ss_pred ------ccccccccccCCEEEEEEecccc---cceeeeecCCeeEEEEECC---------ccCCCCCCeeeeEEEeCCCc
Confidence 01144678999999999999875 8999999999999987642 11223457899999999999
Q ss_pred EEEEEEEe---cCceeEEEEeecccccccccEEEEEEecCCC
Q 008366 515 WAVIRFRA---NNPGVWFMHCHFDVHLPWGLATTFIVENGPT 553 (568)
Q Consensus 515 ~~~irf~a---dnpG~w~~HCHil~H~d~GM~~~~~V~~~~~ 553 (568)
.+.+++.+ +|||.|+||||+++|++.|||+.|+|++...
T Consensus 233 r~~v~v~a~~~~nPG~w~~HCHi~~H~~~GM~~~f~V~~~d~ 274 (313)
T 3tas_A 233 SFGFQVIAGEGVGAGAWMYHCHVQSHSDMGMVGLFLVKKPDG 274 (313)
T ss_dssp EEEEEEETTTTTCSEEEEEEECSHHHHHTTCEEEEEEECTTC
T ss_pred ceEEEEEeccCCCCEeEEEEeCChHHHHCCCeEEEEEECCCC
Confidence 88777764 5899999999999999999999999986543
No 46
>1sdd_A Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3
Probab=99.89 E-value=1e-24 Score=219.95 Aligned_cols=237 Identities=11% Similarity=0.071 Sum_probs=135.0
Q ss_pred EEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCC----cEEEeEEEECCCce
Q 008366 191 FTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTD----PYVTDVVVIAPGQT 266 (568)
Q Consensus 191 ~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~----p~~~d~~~l~pg~r 266 (568)
.++||.+| |+|+++.|+++++||.|.. ....++|.||..+.. +.||.+.. +...+...|.|||+
T Consensus 52 ~~~n~~pG----------P~I~v~~Gd~v~v~~~N~l-~~~~siH~HGl~~~~-~~dG~~~~dg~~~~~~~~~~I~PG~~ 119 (306)
T 1sdd_A 52 SRTSGLLG----------PTLYAEVGDIMKVHFKNKA-HKPLSIHAQGIKYSK-FSEGASYSDHTLPMEKMDDAVAPGQE 119 (306)
T ss_dssp CSSCCSCC----------CCEEEETTCEEEEEEEECS-SSCBCCEEESSCCCT-TTSCCCSCCCCCHHHHTTTCBCTTCE
T ss_pred cccCCccC----------CEEEEeCCCEEEEEEEECC-CCcccEeecceeccc-ccCCCccCCCCcccccCCCccCCCCe
Confidence 34787744 7999999999999999987 456678999887533 57887652 12223467899999
Q ss_pred EEEEEEeCCCC---------ceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccC
Q 008366 267 TDVLLKADQPV---------GSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNI 337 (568)
Q Consensus 267 ~dv~~~~~~~~---------g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l 337 (568)
++..+++++.+ |+||+|+|...... ...+..+. +|............+ ...+ .+ +
T Consensus 120 ~~Y~f~~~~~~gp~~~d~~~GT~wYHsH~~~~~q----~~~GL~G~-liV~~~~~~~~~~~~--~~~d-----~e----~ 183 (306)
T 1sdd_A 120 YTYEWIISEHSGPTHDDPPCLTHIYYSYVNLVED----FNSGLIGP-LLICKKGTLTEDGTQ--KMFE-----KQ----H 183 (306)
T ss_dssp EEEEEECCGGGSCCSSSCSEEEEEEECCSSSHHH----HHTTCCEE-EEEECTTCBCTTSSB--SSSC-----CC----C
T ss_pred EEEEEEeCCccCCCCCCCCceEEEEeccCCchhh----hccCceEE-EEEccCCCCCccCCc--Cccc-----ce----E
Confidence 99999997543 69999999532110 11223343 333322111000000 0000 00 0
Q ss_pred ccCCCCCCCCCCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCC
Q 008366 338 TGLSGGPQWVPCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPN 417 (568)
Q Consensus 338 ~~~~~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~ 417 (568)
.-+. . + +... ..... .....+.+||..+..
T Consensus 184 ~l~~---------~--d------~d~~-------~~~~~--~~~~~~~ING~~~~~------------------------ 213 (306)
T 1sdd_A 184 VLMF---------A--V------FDES-------KSWNQ--TSSLMYTVNGYVNGT------------------------ 213 (306)
T ss_dssp CCBC---------C--E------EETT-------SSSSC--CCCEEECSSSCCSSC------------------------
T ss_pred EEEE---------E--e------cccc-------ccccc--CCCcceeeCCEecCC------------------------
Confidence 0000 0 0 0000 00000 001135566543300
Q ss_pred CCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCC
Q 008366 418 QPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNF 497 (568)
Q Consensus 418 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~ 497 (568)
.+.+.++.|++++|.|.|.+. ....|+||+|||.|++ .
T Consensus 214 -------------------------~p~l~v~~G~~vrlrliN~g~-~~~~h~~hlhG~~~~~----d------------ 251 (306)
T 1sdd_A 214 -------------------------MPDITVCAHDHISWHLIGMSS-GPELFSIHFNGQVLEQ----N------------ 251 (306)
T ss_dssp -------------------------CCCCCCCCC------BBCCCS-SSCEECCBCSSTTCEE----T------------
T ss_pred -------------------------CcceEEcCCCEEEEEEEeCCC-CCccEEEEECCcEeee----C------------
Confidence 133467889999999999864 2257999999999986 1
Q ss_pred cCCCCCceeeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecC
Q 008366 498 NLVNPQRRNTIAVPIGGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVENG 551 (568)
Q Consensus 498 ~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 551 (568)
+..+||+.|.||+.+.++|++++||.|+||||+++|++.|||+.|+|.+.
T Consensus 252 ----G~~~dtv~l~pger~~v~~~~~~pG~~~~hch~~~H~~~GM~~~~~V~~~ 301 (306)
T 1sdd_A 252 ----HHKISAITLVSATSTTANMTVSPEGRWTIASLIPRHFQAGMQAYIDIKNC 301 (306)
T ss_dssp ----TEECSCCCEETTCCBC--------CCCCCBCCSTTTGGGTCBCCC-----
T ss_pred ----CEEcceEEECCCcEEEEEEEcCCCeEEEEEeCChHHHhcCCeEEEEEecC
Confidence 13599999999999999999999999999999999999999999999853
No 47
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=99.88 E-value=2e-22 Score=223.75 Aligned_cols=238 Identities=12% Similarity=0.175 Sum_probs=144.7
Q ss_pred ceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCC---c-EEEeEEEECCCceEEEEEEeCCC-----C
Q 008366 207 QTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTD---P-YVTDVVVIAPGQTTDVLLKADQP-----V 277 (568)
Q Consensus 207 ~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~---p-~~~d~~~l~pg~r~dv~~~~~~~-----~ 277 (568)
..|+|+++.|+++++||.|... ...++|.||.... .+.||.+.. | ..+....|.||++++..+++++. +
T Consensus 67 pGP~I~~~~Gd~v~v~~~N~l~-~~~siH~HGl~~~-~~~DG~~~~~~~~~~~~~~~~I~PG~~~tY~f~~~~~~gp~~~ 144 (647)
T 1sdd_B 67 LGPVIRAEVDDVIQVRFKNLAS-RPYSLHAHGLSYE-KSSEGKTYEDDSPEWFKEDNAIQPNKTYTYVWHATTRSGPENP 144 (647)
T ss_dssp SCCCEEEETTCEEEEEECCCSS-SCBCCEEETCC----------------------CCBCTTCCEECCEECCTTTSCCSS
T ss_pred cCceEEEeCCCEEEEEEEECCC-CceEEecCcceeC-CCCCCccccCCCCcccccCcccCCCCeEEEEEECCcccCCCCC
Confidence 4589999999999999999985 4567899988765 478997642 1 22345679999999999999863 5
Q ss_pred c----eeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccCccCCCCCCCCCCCCCC
Q 008366 278 G----SYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQWVPCPRRV 353 (568)
Q Consensus 278 g----~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~p~~~ 353 (568)
| +||+|+|...... ...+..+..||.-.+..... +..+. .
T Consensus 145 G~~c~T~wYHsH~~~~~q----~~~GL~G~lIV~~~~~~~~~---~~~~~-~---------------------------- 188 (647)
T 1sdd_B 145 GSACRAWAYYSAVNPEKD----IHSGLIGPLLICRKGTLDKE---TNMPV-D---------------------------- 188 (647)
T ss_dssp SCSEEEEEEECCSSHHHH----HTTTCEEEEEEECTTSSCTT---SCCCS-S----------------------------
T ss_pred CCCceEEEEccCCCCccc----ccccCccCEEEeeCCCcccc---cCCCC-c----------------------------
Confidence 7 9999999742110 11223333334322211100 00000 0
Q ss_pred ceEEEEEEc-cCcc-cCCCC-C-------cccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCCCCCccc
Q 008366 354 DERMFVTVG-LGLE-QCPAN-A-------TCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPNQPPVEF 423 (568)
Q Consensus 354 d~~~~~~~~-~~~~-~~~~~-~-------~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~ 423 (568)
++.+.+.+. +... ....+ + ...........+.+||..+
T Consensus 189 ~~e~~l~l~~~d~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~iNG~~~-------------------------------- 236 (647)
T 1sdd_B 189 MREFVLLFMVFDEKKSWYYDKKPTRSWRRASSEVKNSHEFHAINGMIY-------------------------------- 236 (647)
T ss_dssp CCEEEEEEEEEEGGGSSCCC---------------CCCEEEEETTBSS--------------------------------
T ss_pred ceeEEEEEEeecCccccccccCcccccccCCcchhhcCceeccCCEec--------------------------------
Confidence 111111110 0000 00000 0 0000000011234444322
Q ss_pred ccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCC
Q 008366 424 DYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQ 503 (568)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~ 503 (568)
..+.+.++.|++++|+|.|.+. ....||||+|||.|+|++. ++.
T Consensus 237 ------------------~~p~l~v~~G~~vrlrliN~~~-~~~~h~~hlhG~~f~vi~~-----------------d~~ 280 (647)
T 1sdd_B 237 ------------------NLPGLRMYEQEWVRLHLLNLGG-SRDIHVVHFHGQTLLENGT-----------------QQH 280 (647)
T ss_dssp ------------------CCCCCEEETTCEEEEEEEECCC-TTCCEEEEETTCCEEECSS-----------------SCE
T ss_pred ------------------CCCCeEEcCCCEEEEEEEeCCC-CCcceeEEEcCcEEEEecC-----------------CCc
Confidence 1145578899999999999763 2358999999999999854 135
Q ss_pred ceeeEEeCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEec
Q 008366 504 RRNTIAVPIGGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVEN 550 (568)
Q Consensus 504 ~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~ 550 (568)
++||+.|.||+++.|+|++++||.|+||||+++|++.|||+.|.|.+
T Consensus 281 ~~d~v~l~pg~r~~v~~~~~~pG~w~~hch~~~h~~~Gm~~~~~V~~ 327 (647)
T 1sdd_B 281 QLGVWPLLPGSFKTLEMKASKPGWWLLDTEVGEIQRAGMQTPFLIVD 327 (647)
T ss_dssp EESSEEECTTEEEEEEEECCSSEEEEEECCCHHHHTTTCEEEEEEEC
T ss_pred ccceEEECCCeEEEEEEEeccceEeecccCcccccccccccceeeec
Confidence 79999999999999999999999999999999999999999999974
No 48
>1kbv_A ANIA, major outer membrane protein PAN 1; ANIA[NO2-], oxidoreductase; 1.95A {Neisseria gonorrhoeae} SCOP: b.6.1.3 b.6.1.3 PDB: 1kbw_A
Probab=99.87 E-value=2.5e-21 Score=197.05 Aligned_cols=251 Identities=17% Similarity=0.135 Sum_probs=158.8
Q ss_pred CceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCC-CeEEEEEcCceeEEEEecCCCCCcEEEeEEEECCCce
Q 008366 188 SDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALN-NQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQT 266 (568)
Q Consensus 188 ~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pg~r 266 (568)
...+++||+. ..|+|+++.|++++||++|.... ..+++|+||.. +.||... ...|.||++
T Consensus 58 ~~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~~~ih~HG~~----~~dG~~~------~~~i~PG~~ 118 (327)
T 1kbv_A 58 YRYWTFDGDV---------PGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAAT----GQGGGAA------ATFTAPGRT 118 (327)
T ss_dssp EEEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGTT------TTCBCTTEE
T ss_pred EEEEEECCcc---------CCCeEEEeCCCEEEEEEEECCCCCCceeeEeCccc----cCCCCCc------ceeecCCCE
Confidence 3479999982 45899999999999999999753 45678999863 5788642 124899999
Q ss_pred EEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccCccCCCCCCC
Q 008366 267 TDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQW 346 (568)
Q Consensus 267 ~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~ 346 (568)
+++.|+++ .+|+||+|||....... ...+..+ +++.. ... .+| ..+. .....+ .+. .....
T Consensus 119 ~~y~f~~~-~~Gt~wyH~h~~~~~~~---~~~Gl~G-~~iV~-~~~----~~p---~~d~-e~~l~~-~d~--~~~~~-- 179 (327)
T 1kbv_A 119 STFSFKAL-QPGLYIYHCAVAPVGMH---IANGMYG-LILVE-PKE----GLP---KVDK-EFYIVQ-GDF--YTKGK-- 179 (327)
T ss_dssp EEEEEECC-SCEEEEEECCCSSHHHH---HHTTCEE-EEEEE-CTT----CCC---CCSE-EEEEEE-EEE--CBSSC--
T ss_pred EEEEEECC-CCeEEEEEeCCCChhhh---hhcceEE-EEEEe-cCC----CCC---CCce-EEEEEe-eee--eccCc--
Confidence 99999998 58999999986321000 1111223 23322 211 112 1110 000000 000 00000
Q ss_pred CCCCCCCceEEEEEEccCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCCCCCcccccC
Q 008366 347 VPCPRRVDERMFVTVGLGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPNQPPVEFDYT 426 (568)
Q Consensus 347 ~~~p~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~~ 426 (568)
. ....... ...... .+.. .-.+.+||+.+.
T Consensus 180 ---~-~~~g~~~--~~~~~~--------~~~~--~~~~~iNG~~~~---------------------------------- 209 (327)
T 1kbv_A 180 ---K-GAQGLQP--FDMDKA--------VAEQ--PEYVVFNGHVGA---------------------------------- 209 (327)
T ss_dssp ---T-TCCEEEC--BCHHHH--------HHTC--CSEEEETTSTTT----------------------------------
T ss_pred ---c-ccccccc--cChhHh--------ccCC--CceEEEcCcccC----------------------------------
Confidence 0 0000000 000000 0000 013344443220
Q ss_pred CCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCcee
Q 008366 427 NTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRN 506 (568)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rD 506 (568)
. .....+.++.|++++|.|.|.+. ...|+||+|||.|+|++...+ . ..|..+|
T Consensus 210 ------------~-~~~~~l~v~~G~~vRlRliN~~~--~~~~~~~l~Gh~f~vi~~DG~---------~---~~p~~~d 262 (327)
T 1kbv_A 210 ------------L-TGDNALKAKAGETVRMYVGNGGP--NLVSSFHVIGEIFDKVYVEGG---------K---LINENVQ 262 (327)
T ss_dssp ------------T-SGGGCEEEETTEEEEEEEEEEES--SCCEEEEEETCCBSEEEGGGS---------S---CEECSBS
T ss_pred ------------C-CCceeEEeCCCCEEEEEEECCCC--CCceeEEEeCCEEEEEEcCCC---------c---CCCCcee
Confidence 0 01156788999999999999763 378999999999999998432 1 2367899
Q ss_pred eEEeCCCcEEEEEEEecCceeEEEEeeccccc-ccccEEEEEEecCCC
Q 008366 507 TIAVPIGGWAVIRFRANNPGVWFMHCHFDVHL-PWGLATTFIVENGPT 553 (568)
Q Consensus 507 Tv~vp~~g~~~irf~adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~ 553 (568)
++.|.+|+.+.|.|++++||.|.+|||+.+|. ..||++++.|+...+
T Consensus 263 ~l~l~pGer~dv~v~~~~pG~y~l~~h~~~~~~~~g~~a~l~~~g~~~ 310 (327)
T 1kbv_A 263 STIVPAGGSAIVEFKVDIPGNYTLVDHSIFRAFNKGALGQLKVEGAEN 310 (327)
T ss_dssp EEEECTTEEEEEEEEECSCEEEEEEESSTHHHHHSSCEEEEEEESCCC
T ss_pred EEEECCCCEEEEEEEeCCCeEEEEEeccccccccCCcEEEEEECCCCC
Confidence 99999999999999999999999999999995 889999999986543
No 49
>2bw4_A Copper-containing nitrite reductase; oxidoreductase, denitrification, catalysis, enzyme mechanism, nitrate assimilation; 0.90A {Achromobacter cycloclastes} SCOP: b.6.1.3 b.6.1.3 PDB: 1nib_A 1nia_A 1nid_A 1nie_A 1nic_A 1nif_A 2bw5_A 2bwd_A 2bwi_A 2nrd_A 2y1a_A 1kcb_A 1rzp_A* 1rzq_A 2avf_A 1as6_A 1aq8_A 1as7_A 1as8_A 2afn_A ...
Probab=99.87 E-value=7.1e-21 Score=195.14 Aligned_cols=94 Identities=22% Similarity=0.271 Sum_probs=78.4
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCC--ceeeEEeCCCcEEEEEEE
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQ--RRNTIAVPIGGWAVIRFR 521 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~--~rDTv~vp~~g~~~irf~ 521 (568)
+.+.++.|++++|++.|.+. ..|++|+|||.|+|+.. |.+ ..++ ++||+.|++|+.+.|.|+
T Consensus 231 ~~l~v~~G~r~Rl~n~~~~~---~~~~~~i~gh~~~Vi~d--G~~-----------~~~p~~~~dtv~l~pGer~~v~v~ 294 (340)
T 2bw4_A 231 HALTAAVGERVLVVHSQANR---DTRPHLIGGHGDYVWAT--GKF-----------RNPPDLDQETWLIPGGTAGAAFYT 294 (340)
T ss_dssp GCEEEETTCEEEEEEEESSS---CBCEEEETCCEEEEETT--CCT-----------TSCCEEEESCCCBCTTEEEEEEEE
T ss_pred CceEcCCCCEEEEEECCCCC---ccceEEecCcceEEeCC--Ccc-----------cCCccccceEEEeCCCceEEEEEE
Confidence 56788999999988877554 78899999999999852 211 1222 479999999999999999
Q ss_pred ecCceeEEEEeecc-cccccccEEEEEEecCCC
Q 008366 522 ANNPGVWFMHCHFD-VHLPWGLATTFIVENGPT 553 (568)
Q Consensus 522 adnpG~w~~HCHil-~H~d~GM~~~~~V~~~~~ 553 (568)
+++||.|+||||++ +|++.|||+.|+|+...+
T Consensus 295 ~~~pG~y~~~~h~~~~h~~~Gm~~~~~V~~~~~ 327 (340)
T 2bw4_A 295 FRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWN 327 (340)
T ss_dssp CCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred CCCCeeeEEEcCchHHHHhCCCEEEEEECCCCc
Confidence 99999999999999 599999999999986544
No 50
>1mzy_A Copper-containing nitrite reductase; mutant M182T, gating mechanism, electron oxidoreductase; 1.46A {Rhodobacter sphaeroides} SCOP: b.6.1.3 b.6.1.3 PDB: 1mzz_A 1n70_A 1zv2_A 2a3t_A 2dws_A 2dwt_A 2dy2_A
Probab=99.84 E-value=1.6e-19 Score=184.52 Aligned_cols=95 Identities=19% Similarity=0.195 Sum_probs=74.4
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCC-ceeeEEeCCCcEEEEEEEe
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQ-RRNTIAVPIGGWAVIRFRA 522 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~-~rDTv~vp~~g~~~irf~a 522 (568)
..+.++.|++++|++.|.+. ..|++++|+|.|+|++ .|.+- ..|. ++||+.|.+|+.+.+.|.+
T Consensus 225 ~~l~v~~Ger~Rl~n~~~~~---~~~~h~i~~h~~~Vi~--dG~~~----------~~p~~~~dtv~l~pGer~~v~v~a 289 (333)
T 1mzy_A 225 GALKAKVGDNVLFVHSQPNR---DSRPHLIGGHGDLVWE--TGKFH----------NAPERDLETWFIRGGTAGAALYKF 289 (333)
T ss_dssp GCEEEETTCEEEEEEEESSS---CBCEEEETCCEEEEET--TCCTT----------SCCEEEESBCCBCTTEEEEEEEEC
T ss_pred cceEecCCCEEEEEECCCCC---ccccEEECCCCeEEEe--CCccc----------CCCccCcceEEECCCceEEEEEEc
Confidence 55788999999988776542 4444557778888875 23211 1122 5899999999999999999
Q ss_pred cCceeEEEEeeccccc-ccccEEEEEEecCCC
Q 008366 523 NNPGVWFMHCHFDVHL-PWGLATTFIVENGPT 553 (568)
Q Consensus 523 dnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~ 553 (568)
++||.|+||||++.|+ +.|||+.|+|....+
T Consensus 290 ~~pG~y~~~ch~~~h~~~~Gm~~~~~v~~~~~ 321 (333)
T 1mzy_A 290 LQPGVYAYVNHNLIEAVHKGATAHVLVEGEWD 321 (333)
T ss_dssp CSCEEEEEEESSHHHHHTTCCEEEEEEESCCC
T ss_pred CCCEEEEEecChhhhHhhCCCEEEEEEcCCCC
Confidence 9999999999999997 999999999986543
No 51
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=99.83 E-value=6.5e-22 Score=221.14 Aligned_cols=88 Identities=18% Similarity=0.328 Sum_probs=78.4
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
+.+.++.|++++|.|.|.+. ..+.||||||||.|+|++.+ +.++||+.|+|++++.|+|+++
T Consensus 368 ~~l~v~~Ge~vr~rliN~g~-~~~~H~fHlhGh~f~Vv~~d-----------------g~~~Dtv~l~Pg~~~~v~~~ad 429 (770)
T 2r7e_B 368 PGLVMAQDQRIRWYLLSMGS-NENIHSIHFSGHVFTVRKKE-----------------EYKMALYNLYPGVFETVEMLPS 429 (770)
T ss_dssp CCCCCCSSSCEEEECCCCCS-SSCCCEEEBSSCCEECCSSS-----------------CCEESEEECCTTCCCEEEECCS
T ss_pred CCeEEeCCCEEEEEEEeCCC-CcceEEEEEcCCEEEEEecC-----------------CceeeEEEECCCeEEEEEEEeC
Confidence 44578999999999999763 23589999999999998763 1289999999999999999999
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
+||.|+||||+++|++.|||+.|.|.
T Consensus 430 ~pG~w~~hcH~~~H~~~GM~~~~~V~ 455 (770)
T 2r7e_B 430 KAGIWRVECLIGEHLHAGMSTLFLVY 455 (770)
T ss_dssp SCBCCCBCCCSHHHHTTBCCCCCCBC
T ss_pred CCCceEEEeccccccccccccccccc
Confidence 99999999999999999999999984
No 52
>2xu9_A Laccase; oxidoreductase, multicopper oxidases; 1.50A {Thermus thermophilus} PDB: 2xuw_A 2xvb_A 2yae_A 2yaf_A 2yah_A 2yam_A 2yao_A 2yap_A 2yaq_A 2yar_A 4ai7_A
Probab=99.80 E-value=1.1e-18 Score=184.68 Aligned_cols=229 Identities=19% Similarity=0.206 Sum_probs=160.0
Q ss_pred ceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CCeeEEEccccccCCCCCCCCCC-----cccccCCCCCeEEEEE
Q 008366 41 CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP-YNITIHWHGIFQIRSIWADGPNM-----ITQCPIRPGNSYTYKF 114 (568)
Q Consensus 41 G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~-----~~~~~i~PG~~~~y~f 114 (568)
|.....+++||+. .|.|+|++| ++|+||.|... +...+|++|..+...+ .||.+. +....|.||||++..+
T Consensus 174 g~~~~~~~iNG~~-~p~l~v~~g-~~RlRliN~~~~~~~~~~i~gh~~~vi~-~DG~~~~~p~~~~~l~l~pgeR~dv~v 250 (439)
T 2xu9_A 174 GKEGDLVLVNGAL-RPTLVAQKA-TLRLRLLNASNARYYRLALQDHPLYLIA-ADGGFLEEPLEVSELLLAPGERAEVLV 250 (439)
T ss_dssp CCCCSEEEETTEE-SCEEECSSS-EEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEEESCEEECTTCEEEEEE
T ss_pred CCCCCEEEECCcc-CCcEEecCC-eEEEEEEecCCCceEEEEECCceEEEEe-cCCCCCCCceEeceEEECCceeEEEEE
Confidence 4567889999998 599999999 99999999975 4688999999887665 699652 3456799999999999
Q ss_pred EeCCCCCceeEecChhhh--hh--cc--------------eE--EEEEecCCCCCCCCCCCCCceeEEEeecccCcHHHH
Q 008366 115 RIINQEGTLWWHAHISML--RA--TV--------------HG--AFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIMDV 174 (568)
Q Consensus 115 ~~~~~~Gt~~YH~h~~~~--~~--Gl--------------~G--~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~~~ 174 (568)
++ +++|.||++++.... .. || .. .|.+.... ...+.+.... .+.++......
T Consensus 251 ~~-~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~p~~l~----~~~~l~~~~~~-- 322 (439)
T 2xu9_A 251 RL-RKEGRFLLQALPYDRGAMGMMDMGGMAHAMPQGPSRPETLLYLIAPKNP-KPLPLPKALS----PFPTLPAPVVT-- 322 (439)
T ss_dssp EC-CSSEEEEEEEECCCCCCEEEECSSSCCEEEECCSCCCEEEEEEEECSSC-CCCCCCSCCC----CCCCCCCCSEE--
T ss_pred Ec-CCCceEEEEecccccCCccccccccccccccCCCCCcceeEEEEecCCC-ccccCcccCC----CcccCCCCCcc--
Confidence 98 679999999974311 00 22 11 12222211 1111111000 00000000000
Q ss_pred Hhhc-cccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCC-C
Q 008366 175 ANRG-EITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT-D 252 (568)
Q Consensus 175 ~~~~-~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~-~ 252 (568)
... ...+. ....++|||+++.. ..+.+.++.|++++|+|.|.+...|. ||||||+|+|++.+|... .
T Consensus 323 -r~~~l~~~~---~g~~~~iNg~~~~~------~~~~~~~~~g~~~~~~~~N~~~~~HP-~HLHG~~F~Vl~~~g~~~~~ 391 (439)
T 2xu9_A 323 -RRLVLTEDM---MAARFFINGQVFDH------RRVDLKGQAQTVEVWEVENQGDMDHP-FHLHVHPFQVLSVGGRPFPY 391 (439)
T ss_dssp -EEEEEEEEG---GGTEEEETTBCCCT------TCCCEEECTTCEEEEEEEECSSSCEE-EEESSCCBEEEEETTEECSS
T ss_pred -eEEEEEeec---cCceEeECCEECCC------CCCceecCCCCEEEEEEEcCCCCCCC-ceeCCCcEEEEeeCCCCCCC
Confidence 000 00000 01368899997631 23458999999999999999866555 999999999999999876 6
Q ss_pred cEEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCC
Q 008366 253 PYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPP 292 (568)
Q Consensus 253 p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~ 292 (568)
|...|++.|.||+++.|.|+++ +||.|.+|||...+...
T Consensus 392 p~~rDTv~v~p~~~v~i~f~ad-npG~w~~HCHil~H~~~ 430 (439)
T 2xu9_A 392 RAWKDVVNLKAGEVARLLVPLR-EKGRTVFHCHIVEHEDR 430 (439)
T ss_dssp CCCBSEEEECTTCEEEEEEECC-SCEEEEEEESSHHHHHT
T ss_pred CCCeEEEEeCCCCEEEEEEEcC-CCCCEEEECCcchhhhc
Confidence 8889999999999999999988 89999999998776543
No 53
>2zoo_A Probable nitrite reductase; electron transfer, electron transport, heme, iron, binding, oxidoreductase, transport; HET: SUC HEM; 1.95A {Pseudoalteromonas haloplanktis}
Probab=99.80 E-value=8.7e-19 Score=186.14 Aligned_cols=242 Identities=14% Similarity=0.150 Sum_probs=158.1
Q ss_pred CceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCC-CeEEEEEcCceeEEEEecCCCCCcEEEeEEEECCCce
Q 008366 188 SDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALN-NQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQT 266 (568)
Q Consensus 188 ~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pg~r 266 (568)
...+++||+. ..|.|+++.|++++|||.|.... ..+.+|+||+. ..||... +..|.||++
T Consensus 48 ~~~~~~ng~~---------pgp~i~v~~Gd~v~v~~~N~l~~~~~~~iH~HG~~----~~dG~~~------~~~i~pg~~ 108 (442)
T 2zoo_A 48 YVFWSFGETV---------PGSFIRVREGDEIEFNLSNHPSSKMPHNIDLHAVT----GPGGGAE------SSFTAPGHT 108 (442)
T ss_dssp EEEEEETTBS---------SCCBEEEETTCEEEEEEEECTTCSSCBCCEETTCC----SGGGGGG------GCCBCTTCE
T ss_pred EEEEEECCcC---------CCCcEEEeCCCEEEEEEEECCCCCCCCCEEecCCc----CCCCCCc------cEEECCCCE
Confidence 3579999993 45899999999999999999642 45679999975 3677532 235899999
Q ss_pred EEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccCccCCCCCCC
Q 008366 267 TDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQW 346 (568)
Q Consensus 267 ~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~ 346 (568)
+++.|+++ .+|.||+|||....... ... +..+.+.+..... +| ..
T Consensus 109 ~~y~f~~~-~~Gt~~yH~H~~~~~~~---~~~--Gl~G~~iv~~~~~----~~---~~---------------------- 153 (442)
T 2zoo_A 109 STFNFKAL-NPGLYIYHCATAPVGMH---IAN--GMYGLILVEPKEG----LA---PV---------------------- 153 (442)
T ss_dssp EEEEEECC-SCEEEEEECCCSSHHHH---HHT--TCEEEEEEECTTC----CC---CC----------------------
T ss_pred EEEEEEcC-CCeEEEEecCCCChHHH---HhC--ccEEEEEEeCCCC----CC---CC----------------------
Confidence 99999998 69999999974211000 001 1233333433211 11 11
Q ss_pred CCCCCCCceEEEEEEc-cCcccCCC-------CC-cccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCC
Q 008366 347 VPCPRRVDERMFVTVG-LGLEQCPA-------NA-TCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPN 417 (568)
Q Consensus 347 ~~~p~~~d~~~~~~~~-~~~~~~~~-------~~-~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~ 417 (568)
|+.+.+.+. ........ +. ... ....-.+.+||+.+..
T Consensus 154 -------d~e~~l~l~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~~liNG~~~~~------------------------ 200 (442)
T 2zoo_A 154 -------DREYYLVQGDFYTKGEFGEAGLQPFDMAKAI--DEDADYVVFNGSVGST------------------------ 200 (442)
T ss_dssp -------SEEEEEEEEEECBSSCTTCCEEECBCHHHHH--TTCCSEEEETTSTTTT------------------------
T ss_pred -------CceEEEEeeeeeccCcccccccccCChhHhc--cCCCCEEEECCCcCCC------------------------
Confidence 111111110 00000000 00 000 0000123344432100
Q ss_pred CCCcccccCCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCC
Q 008366 418 QPPVEFDYTNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNF 497 (568)
Q Consensus 418 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~ 497 (568)
...+.+.++.|+++.|.|.|.+. ...|+||+|||.|.|++... ..
T Consensus 201 -----------------------~~~~~l~v~~G~~vrlrliN~~~--~~~~~~~i~g~~~~vi~~DG---------~~- 245 (442)
T 2zoo_A 201 -----------------------TDENSLTAKVGETVRLYIGNGGP--NLVSSFHVIGEIFDTVYVEG---------GS- 245 (442)
T ss_dssp -----------------------SGGGCEEEETTCEEEEEEEEEES--SCCEEEEEETCCBSEEEGGG---------SS-
T ss_pred -----------------------CCCCceEeCCCCEEEEEEEeCCC--CCceeeEEcCCEEEEEecCC---------cc-
Confidence 00145678999999999999753 37899999999999999842 11
Q ss_pred cCCCCCceeeEEeCCCcEEEEEEEecCceeEEEEeecccc-cccccEEEEEEecCCC
Q 008366 498 NLVNPQRRNTIAVPIGGWAVIRFRANNPGVWFMHCHFDVH-LPWGLATTFIVENGPT 553 (568)
Q Consensus 498 ~~~~p~~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H-~d~GM~~~~~V~~~~~ 553 (568)
..|.+.|++.|.||+.+.|.|+++++|.|++|||...| .+.||++.|.|....+
T Consensus 246 --~~p~~~~~~~l~pg~r~~v~v~~~~~G~y~~~~~~~~~~~~~g~~a~l~v~~~~~ 300 (442)
T 2zoo_A 246 --LKNHNVQTTLIPAGGAAIVEFKVEVPGTFILVDHSIFRAFNKGALAMLKVEGPDD 300 (442)
T ss_dssp --CEECSBSEEEECTTEEEEEEEECCSCEEEEEEESSTHHHHTTSCEEEEEEESCCC
T ss_pred --CCCccceEEEECCCeeEEEEEEcCCCCeEEEEecccccccccCceEEEEecCCCC
Confidence 22678999999999999999999999999999999999 5999999999986553
No 54
>1oe1_A Dissimilatory copper-containing nitrite reductase; denitrification; HET: PG4; 1.04A {Alcaligenes xylosoxidans} SCOP: b.6.1.3 b.6.1.3 PDB: 1oe3_A* 2xwz_A* 2vn3_A 2zon_A* 1haw_A 1hau_A* 2vm4_A* 2vw4_A* 2vw6_A* 2vw7_A* 2vm3_A* 1oe2_A* 2jl0_A* 2xx1_A 2xxg_A* 2xxf_A* 1gs8_A 1wa1_X* 1wa2_X* 2jl3_A* ...
Probab=99.79 E-value=6e-18 Score=173.07 Aligned_cols=264 Identities=17% Similarity=0.157 Sum_probs=150.6
Q ss_pred CceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCC-CeEEEEEcCceeEEEEecCCCCCcEEEeEEEECCCce
Q 008366 188 SDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALN-NQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQT 266 (568)
Q Consensus 188 ~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~-~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pg~r 266 (568)
...+++||+. ..|+|+++.|+++++|+.|.... ..+.+++||+.. +.||..+. .|.||++
T Consensus 53 ~~~~~~ng~~---------pgP~i~v~~Gd~v~v~~~N~~~~~~~h~~~~h~~~~---~~~~~~~~-------~i~pG~~ 113 (336)
T 1oe1_A 53 LQAMTFNGSM---------PGPTLVVHEGDYVQLTLVNPATNAMPHNVDFHGATG---ALGGAKLT-------NVNPGEQ 113 (336)
T ss_dssp EEEEEETTBS---------SCCCEEEETTCEEEEEEEECTTCCSCBCCEETTSCS---GGGGGGGC-------CBCTTEE
T ss_pred EEEEEECCcc---------CCCeEEEcCCCEEEEEEEcCCCCCccccceECCCCC---CCCCcceE-------EeCCCCE
Confidence 3579999982 45899999999999999998642 455688998753 22333221 3899999
Q ss_pred EEEEEEeCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcCCCCCCCCCCCCCCCCCCCccccccccCccCCCCCCC
Q 008366 267 TDVLLKADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDGASTANPIMPALPAYNDTPTAYTFYSNITGLSGGPQW 346 (568)
Q Consensus 267 ~dv~~~~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~~~~ 346 (568)
++..|+++ .+|.||+|||....... ....+..+..+|+...... ...+
T Consensus 114 ~~y~f~~~-~~Gt~~yH~h~~~~~~~--~~~~Gl~G~liV~~~~~~~--~~~~--------------------------- 161 (336)
T 1oe1_A 114 ATLRFKAD-RSGTFVYHCAPEGMVPW--HVVSGMSGTLMVLPRDGLK--DPQG--------------------------- 161 (336)
T ss_dssp EEEEEECC-SCEEEEEECCCTTCHHH--HHHTTCEEEEEEECTTCCB--CTTS---------------------------
T ss_pred EEEEEECC-CCeEEEEecCCCCchhH--HHhCCCeEEEEEecCcCCc--cccc---------------------------
Confidence 99999998 59999999996421000 0011223433443221100 0000
Q ss_pred CCCCCCCceEEEEEEc-cCcccCCCCCcccCCCCCceeeeecCcceeCCCchhhhhhhhhcCCCcccCCCCCCCCccccc
Q 008366 347 VPCPRRVDERMFVTVG-LGLEQCPANATCQGPFSQRLSASMNNHSFQAPTSLSILQAYFFNVGGVYEPNFPNQPPVEFDY 425 (568)
Q Consensus 347 ~~~p~~~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~n~~s~~~p~~~~ll~~~~~~~~g~~~~~~~~~~p~~~~~ 425 (568)
.+...|+.+.+.+. ...... ..+. +. +|..+. ....... ....+ ..+..+-.
T Consensus 162 --~~~~~D~e~~l~~~D~~~~~~--------~~g~-~~------~~~~~~-~~~~~~~-~~~~~--------~~~~~~li 214 (336)
T 1oe1_A 162 --KPLHYDRAYTIGEFDLYIPKG--------PDGK-YK------DYATLA-ESYGDTV-QVMRT--------LTPSHIVF 214 (336)
T ss_dssp --CBCCCSEEEEEEEEEECCCBC--------TTSS-BC------CCSSTG-GGHHHHH-HHHHT--------TCCSEEEE
T ss_pred --CcccCCceeEeeeeeeeeccc--------cCCc-ee------eccccc-ccccchh-hHhhc--------CCCCEEEE
Confidence 01123444333221 000000 0000 00 000000 0000000 00000 00000111
Q ss_pred CCCCCCCCccccCCCCCceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCC--
Q 008366 426 TNTNVSNDMSLLFPPKTTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQ-- 503 (568)
Q Consensus 426 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~-- 503 (568)
++.. ....+.+.+.++.|++++|+..+.+. ..+++++|||.|.|+. +|.+ ..|+
T Consensus 215 NG~~--------~~~~~~~~l~v~~GervRlin~~~~~---~~~~~~i~gh~~~Vi~--DG~~-----------~~p~~~ 270 (336)
T 1oe1_A 215 NGKV--------GALTGANALTAKVGETVLLIHSQANR---DTRPHLIGGHGDWVWE--TGKF-----------ANPPQR 270 (336)
T ss_dssp TTST--------TTTSGGGCEEEETTCEEEEEEEESSS---CBCEEETTCCEEEEET--TCCT-----------TSCCEE
T ss_pred CCee--------ccCCCCcceEcCCCCEEEEEecCCCC---ccceEEECCcCceEeC--CCcC-----------cCCccc
Confidence 1100 00111266789999999986665443 5566667999999984 3221 2232
Q ss_pred ceeeEEeCCCcEEEEEEEecCceeEEEEeeccccc-ccccEEEEEEecCCC
Q 008366 504 RRNTIAVPIGGWAVIRFRANNPGVWFMHCHFDVHL-PWGLATTFIVENGPT 553 (568)
Q Consensus 504 ~rDTv~vp~~g~~~irf~adnpG~w~~HCHil~H~-d~GM~~~~~V~~~~~ 553 (568)
++||+.|++|+.+.+.+.+++||.|++|||.+.|. +.||++.|.|+...+
T Consensus 271 ~~dtv~i~pGer~dvlv~~~~pG~y~~~~h~~~~~~~~G~~~~~~V~~~~~ 321 (336)
T 1oe1_A 271 DLETWFIRGGSAGAALYTFKQPGVYAYLNHNLIEAFELGAAGHIKVEGKWN 321 (336)
T ss_dssp EESBCCBCTTEEEEEEEECCSCEEEEEEESSHHHHHTTSCEEEEEEESCCC
T ss_pred cceEEEECCCCcEEEEEEcCCCceEEEEechhhccccCCCeEEEEECCCCC
Confidence 47999999999999999999999999999999985 999999999986544
No 55
>2uxt_A Protein SUFI, SUFI; oxidoreductase, periplasmic, cupredoxin-like, FTS mutant suppressor; 1.90A {Escherichia coli} PDB: 2uxv_A
Probab=99.79 E-value=5.6e-18 Score=179.65 Aligned_cols=251 Identities=12% Similarity=0.086 Sum_probs=163.6
Q ss_pred EEEEEEEEEEeeccC-----------ceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CCeeEEE-ccccccCCCC
Q 008366 26 VEHSFQVKNLTIGRL-----------CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP-YNITIHW-HGIFQIRSIW 92 (568)
Q Consensus 26 ~~~~~~~~~~~~~~~-----------G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~-~~~~iH~-HG~~~~~~~~ 92 (568)
.++.|.++.-....+ |.....+++||+. .|.|+|++| ++|+||.|... +...+|+ ||..+...+
T Consensus 153 ~e~~l~l~D~~~~~~~~~~~~~~~~~~~~~d~~liNG~~-~p~~~v~~g-~~RlRliNa~~~~~~~~~i~dg~~~~vi~- 229 (451)
T 2uxt_A 153 DDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ-SPYVEVSRG-WVRLRLLNASNSRRYQLQMNDGRPLHVIS- 229 (451)
T ss_dssp TEEEEEEEEEEECTTSCEECCCCSSSCCCCSEEEETTEE-SCEEEECSS-EEEEEEEECCSSCCEEEEETTSCCEEEEE-
T ss_pred ceEEEEEEeeecCCCCceecccccCCCCcCCEEEECCcc-cceEEecCC-EEEEEEEccCCceeEEEEECCCCeEEEEE-
Confidence 466777765544332 4456899999997 599999999 99999999975 5688999 898877665
Q ss_pred CCCCC-----CcccccCCCCCeEEEEEEeCCCCCceeEecChhhhhhcc-e-----------EEEEEecCCCCCCCCCCC
Q 008366 93 ADGPN-----MITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRATV-H-----------GAFIIRPKSGHKYPFPKP 155 (568)
Q Consensus 93 ~DG~~-----~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~Gl-~-----------G~liV~~~~~~~~~~~~~ 155 (568)
.||.+ .+.+..|.||||+++.+++ ++.|+||++++......|+ . .+++-........+ .
T Consensus 230 ~DG~~~~~P~~~~~l~l~pgeR~dvlv~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~---~ 305 (451)
T 2uxt_A 230 GDQGFLPAPVSVKQLSLAPGERREILVDM-SNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPL---V 305 (451)
T ss_dssp CSSSEEEEEEEESSEEECTTCEEEEEEEC-TTCCCEEEEC----------------CCCCSCCEEEEEEECSCCC-----
T ss_pred eCCCccCCceEeceEEECceeEEEEEEEe-CCCCEEEEEecCccccccccccccccCCCCCCcceEEEEecCCCcC---c
Confidence 69964 2456789999999999998 6789999998865332221 0 11111110000000 0
Q ss_pred CCceeEEEeecccCcH-HHHHhhccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEE
Q 008366 156 DKEVPIVLGEWWNDDI-MDVANRGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFF 234 (568)
Q Consensus 156 ~~e~~l~~~d~~~~~~-~~~~~~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~ 234 (568)
..+.+..|..+...+. ..........+ .++|||+++.. ..+.+.++.|++++|+|+|. ..+.|
T Consensus 306 ~~~~p~~L~~~~~~~~~~~~~~~~~l~~-------~~~iNg~~f~~------~~~~~~~~~G~~~~~~l~N~---~~HP~ 369 (451)
T 2uxt_A 306 TDSLPMRLLPTEIMAGSPIRSRDISLGD-------DPGINGQLWDV------NRIDVTAQQGTWERWTVRAD---EPQAF 369 (451)
T ss_dssp --CCCSCSSSSCCCCCCCSEEEEEEECS-------SSSBTTBCCCT------TCCCEEEETTCEEEEEEEEE---EEEEE
T ss_pred cccCccccCCCCCCCCCCcceEEEEEee-------EEEECCEeCCC------CCCcEEcCCCCEEEEEEECC---CCcCe
Confidence 0000000000000000 00000000000 46789997641 24578999999999999998 35669
Q ss_pred EEcCceeEEEEecCCCC---CcEEEeEEEECCCceEEEEEEeCCCCce----eEEEEeeccCCCCccccCCCcceEEEEE
Q 008366 235 KIANHKFTVVAVDAGYT---DPYVTDVVVIAPGQTTDVLLKADQPVGS----YYMAARAYAAPPPTIVAFDNTTTRGIVV 307 (568)
Q Consensus 235 ~i~gh~~~via~DG~~~---~p~~~d~~~l~pg~r~dv~~~~~~~~g~----y~~~~~~~~~~~~~~~~~~~~~~~ail~ 307 (568)
|||||.|+|++.||... .|..+|++.| |+++.|.|+++ +||. |.+|||...+... +..+.+.
T Consensus 370 HLHGh~F~Vl~~~G~~~~~~~p~~rDTv~v--g~~~~i~~~~d-npg~~~g~w~~HCHil~H~d~--------GMm~~~~ 438 (451)
T 2uxt_A 370 HIEGVMFQIRNVNGAMPFPEDRGWKDTVWV--DGQVELLVYFG-QPSWAHFPFYFNSQTLEMADR--------GSIGQLL 438 (451)
T ss_dssp EETTCEEEEEEETTBCCCGGGSSCBSEEEE--EEEEEEEEECC-SCCBTTBCEEEEESSHHHHHT--------TCEEEEE
T ss_pred EECCceEEEEeeCCcCCCcccCCCccEEEE--CCEEEEEEEeC-CCCCCCCceEEeCCchhHHhC--------CCcEEEE
Confidence 99999999999999875 4678999999 99999999998 6666 9999999876553 2455566
Q ss_pred EcC
Q 008366 308 YDG 310 (568)
Q Consensus 308 y~~ 310 (568)
+..
T Consensus 439 v~~ 441 (451)
T 2uxt_A 439 VNP 441 (451)
T ss_dssp EEC
T ss_pred Ecc
Confidence 654
No 56
>1v10_A Laccase; multicopper blue oxidase, oxidase; 1.7A {Rigidoporus lignosus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3
Probab=99.73 E-value=1.9e-16 Score=170.83 Aligned_cols=241 Identities=18% Similarity=0.161 Sum_probs=159.7
Q ss_pred eeEEEECCCCC---------CCeEEEecCCEEEEEEEeCCC-CCeeEEEccccccCCCCCCCCCC----cccccCCCCCe
Q 008366 44 QTITAVNGSLP---------GPTIRVQEGDTLIVHVSNESP-YNITIHWHGIFQIRSIWADGPNM----ITQCPIRPGNS 109 (568)
Q Consensus 44 ~~~~~~NG~~p---------GP~i~v~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~~~~~i~PG~~ 109 (568)
...+++||+.. -|+|+|++|+++|+||.|... ....+|++|..+...+ .||.+- +....|.||||
T Consensus 191 ~d~~liNG~~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgqR 269 (521)
T 1v10_A 191 PDTTLINGLGRNSANPSAGQLAVVSVQSGKRYRFRIVSTSCFPNYAFSIDGHRMTVIE-VDGVSHQPLTVDSLTIFAGQR 269 (521)
T ss_dssp CSEEEETTBCCCSSCGGGSCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCEEEECCcccCCCCCCCCCceEEEECCCCEEEEEEEecCCcccEEEEECCCeEEEEe-cCCccccceeeeeEEEcccce
Confidence 56889999853 189999999999999999975 4678999999887665 699642 34567899999
Q ss_pred EEEEEEeCCCCCceeEecChhhh----hhcceEEEEEecCCCCCCCCCCCCCceeEEEeecccCcH------H-----HH
Q 008366 110 YTYKFRIINQEGTLWWHAHISML----RATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDI------M-----DV 174 (568)
Q Consensus 110 ~~y~f~~~~~~Gt~~YH~h~~~~----~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~------~-----~~ 174 (568)
++..+++.+.+|.||.+++.... ..|+..+++.........|..... + ...+.+....+. . ..
T Consensus 270 ~dvlv~~~~~~g~y~i~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~-~-~~~~~~~~l~p~~~~~~p~~~~~~~~ 347 (521)
T 1v10_A 270 YSVVVEANQAVGNYWIRANPSNGRNGFTGGINSAIFRYQGAAVAEPTTSQN-S-GTALNEANLIPLINPGAPGNPVPGGA 347 (521)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTCCSCCCCCCCC-C-SCBCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEEcCCCCCceeeeeccccccccCCCCceeEEEEECCCCCCCCCCCCC-c-ccccchhhcccCCcccCCCcccCCcc
Confidence 99999985457999999875421 114444555543222111110000 0 000000000000 0 00
Q ss_pred Hhhc-cccCCCCCCCceEEEcCCCCCCCCCC---------------CCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcC
Q 008366 175 ANRG-EITGVGPRISDAFTINGMPGDLYPCS---------------ENQTYKLKVEKGKTYLLRIINAALNNQLFFKIAN 238 (568)
Q Consensus 175 ~~~~-~~~g~~~~~~~~~~iNG~~g~~~~~~---------------~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~g 238 (568)
.... ...+. ......++|||+++...... ....+.+.++.|++++++++| ...| .|||||
T Consensus 348 ~~~~~l~~~~-~~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~g~~vei~l~N--~~~H-P~HLHG 423 (521)
T 1v10_A 348 DINLNLRIGR-NATTADFTINGAPFIPPTVPVLLQILSGVTNPNDLLPGGAVISLPANQVIEISIPG--GGNH-PFHLHG 423 (521)
T ss_dssp SEEEECCEEC-CSSSSCCEESSCCCCCCSSCHHHHHHHTCCCGGGSSSTTTEEEECTTCEEEEEEEC--CBSC-EEEESS
T ss_pred eEEEEEEEec-CCceeEEEECCCcccCCCCchhhhhhcCCcccccCCCCceEEEecCCCEEEEEEcC--CCCC-CEEEcc
Confidence 0000 00000 00112578999976421100 012357899999999999999 3444 599999
Q ss_pred ceeEEEEecCCC----CCcEEEeEEEE-CCCceEEEEEEeCCCCceeEEEEeeccCCCC
Q 008366 239 HKFTVVAVDAGY----TDPYVTDVVVI-APGQTTDVLLKADQPVGSYYMAARAYAAPPP 292 (568)
Q Consensus 239 h~~~via~DG~~----~~p~~~d~~~l-~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~ 292 (568)
|+|+|++.+|.. ..|...|++.| .+|+++.|.|+++ +||.|.+|||...+...
T Consensus 424 h~F~Vl~~~~~~~~n~~~p~~rDTV~V~p~gg~v~Irf~aD-NPG~W~~HCHi~~H~~~ 481 (521)
T 1v10_A 424 HNFDVVRTPGSSVYNYVNPVRRDVVSIGGGGDNVTFRFVTD-NPGPWFLHCHIDWHLEA 481 (521)
T ss_dssp CCEEEEECTTCSCCCCSSCCEESEEECCBSSCEEEEEEECC-SCEEEEEEESCHHHHTT
T ss_pred ceEEEEecCCCCccccCCCCeeeeEEeCCCCcEEEEEEEeC-CCeeEEEeeChHHHHhC
Confidence 999999999875 25889999999 8999999999998 89999999999776553
No 57
>1hfu_A Laccase 1; oxidoreductase, blue multi-copper oxidase, type-2 copper depleted, signal, glycoprotein; HET: MAN NAG NDG; 1.68A {Coprinus cinereus} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1a65_A*
Probab=99.73 E-value=1.9e-16 Score=170.28 Aligned_cols=262 Identities=17% Similarity=0.175 Sum_probs=167.4
Q ss_pred EEEEEEEEEeeccCce-----eeeEEEECCCCC--------CCeEEEecCCEEEEEEEeCCC-CCeeEEEccccccCCCC
Q 008366 27 EHSFQVKNLTIGRLCR-----QQTITAVNGSLP--------GPTIRVQEGDTLIVHVSNESP-YNITIHWHGIFQIRSIW 92 (568)
Q Consensus 27 ~~~~~~~~~~~~~~G~-----~~~~~~~NG~~p--------GP~i~v~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~ 92 (568)
++.|.++.-....++. ....+++||+.. .|+|+|++|+++|+||.|... +...+|++|..+...+
T Consensus 143 e~~l~l~Dw~~~~~~~~~~~~~~d~~liNG~~~~~~~~~~~~~~~~v~~g~~~RlRliN~~~~~~~~~~i~gh~~~vi~- 221 (503)
T 1hfu_A 143 NTIITLADWYHIPAPSIQGAAQPDATLINGKGRYVGGPAAELSIVNVEQGKKYRMRLISLSCDPNWQFSIDGHELTIIE- 221 (503)
T ss_dssp TSEEEEEEECSSCGGGCC---CCSEEEETTBCCBTTCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-
T ss_pred eEEEEEcccccCChHHhcCCCCCCEEEECcccccCCCCCCcceEEEEcCCCEEEEEEEecCCcccEEEEEcCceEEEEe-
Confidence 4556665544433332 357889999863 289999999999999999975 4678999999877665
Q ss_pred CCCCC----CcccccCCCCCeEEEEEEeCCCCCceeEecChhh--h------hhcceEEEEEecCCCCCCCCCCCCCcee
Q 008366 93 ADGPN----MITQCPIRPGNSYTYKFRIINQEGTLWWHAHISM--L------RATVHGAFIIRPKSGHKYPFPKPDKEVP 160 (568)
Q Consensus 93 ~DG~~----~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~--~------~~Gl~G~liV~~~~~~~~~~~~~~~e~~ 160 (568)
.||.+ .+....|.||||++..+++...+|.||.+++... . ..++..+++.........|......+ .
T Consensus 222 ~DG~~~~p~~~~~l~l~pgeR~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~~~ail~y~~~~~~~p~~~~~~~-~ 300 (503)
T 1hfu_A 222 VDGELTEPHTVDRLQIFTGQRYSFVLDANQPVDNYWIRAQPNKGRNGLAGTFANGVNSAILRYAGAANADPTTSANPN-P 300 (503)
T ss_dssp ETTEEEEEEEESBEEECTTCEEEEEEECCSCSSEEEEEEEESSCGGGGGGCCGGGTTEEEEEETTSCSSCCCCCCCSS-C
T ss_pred ccCccccccccCeEEEcccceEEEEEEcCCCccceeeeeccccCCcccccccCCCceEEEEEECCCCCCCCCCCCCCc-c
Confidence 69964 2344578999999999998555799999987531 1 11443455554322111111000000 0
Q ss_pred EEEeecccCcHH--HH-------Hhh-ccccCCCCCCCceEEEcCCCCCCCCCC---------------CCceeEEEEEc
Q 008366 161 IVLGEWWNDDIM--DV-------ANR-GEITGVGPRISDAFTINGMPGDLYPCS---------------ENQTYKLKVEK 215 (568)
Q Consensus 161 l~~~d~~~~~~~--~~-------~~~-~~~~g~~~~~~~~~~iNG~~g~~~~~~---------------~~~~~~l~v~~ 215 (568)
..+.+....+.. .. ... ....... .....++|||+++...... ......+.++.
T Consensus 301 ~~l~~~~l~p~~~~~~p~~~~~~~~~~~~~l~~~-~~~~~~~iNg~~~~~~~~P~l~~~~~g~~~~~~~~~~~~~~~v~~ 379 (503)
T 1hfu_A 301 AQLNEADLHALIDPAAPGIPTPGAADVNLRFQLG-FSGGRFTINGTAYESPSVPTLLQIMSGAQSANDLLPAGSVYELPR 379 (503)
T ss_dssp CBCCGGGCBBSSSCSCSSCSSTTCSSEEEECCEE-EETTEEEETTBCCCCCSSCHHHHHHTTCCSGGGSSSTTSEEEECS
T ss_pred CCCccccccccCccCCCCcccCCcceEEEEEEee-ccCceEEECCCccCCCCCcchhhhhcCCcccccCCCCceEEEccC
Confidence 000010000000 00 000 0000000 0012688999976421100 01235789999
Q ss_pred CcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCC----CcEEEeEEEE-CCCceEEEEEEeCCCCceeEEEEeeccCC
Q 008366 216 GKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT----DPYVTDVVVI-APGQTTDVLLKADQPVGSYYMAARAYAAP 290 (568)
Q Consensus 216 G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~----~p~~~d~~~l-~pg~r~dv~~~~~~~~g~y~~~~~~~~~~ 290 (568)
|++++++++|......|.||||||.|+|++.+|... .|...|++.| .+|+++.|.|+++ +||.|.+|||...+.
T Consensus 380 g~~vei~l~~n~~~~~HP~HLHGh~F~Vl~~~~~~~~n~~~p~~rDTV~V~ppg~~v~irf~ad-nPG~W~~HCHil~H~ 458 (503)
T 1hfu_A 380 NQVVELVVPAGVLGGPHPFHLHGHAFSVVRSAGSSTYNFVNPVKRDVVSLGVTGDEVTIRFVTD-NPGPWFFHCHIEFHL 458 (503)
T ss_dssp SCEEEEEEECCSTTCCCEEEETTCCEEEEECTTCCCCCCSSBCEESEEECCSTTCEEEEEEECC-SCEEEEEEESSHHHH
T ss_pred CCEEEEEEECCCCCCCCCEEEecceEEEEecCCCCccccCCCCeeeeEEecCCCceEEEEEEcC-CCeeeeEecCchhHh
Confidence 999999999543334455999999999999998752 5889999999 8999999999998 899999999987765
Q ss_pred CC
Q 008366 291 PP 292 (568)
Q Consensus 291 ~~ 292 (568)
..
T Consensus 459 ~~ 460 (503)
T 1hfu_A 459 MN 460 (503)
T ss_dssp HT
T ss_pred hC
Confidence 43
No 58
>3zx1_A Oxidoreductase, putative; laccase, metallo-oxidase, cuprous oxidase; 1.95A {Campylobacter jejuni subsp}
Probab=99.72 E-value=2.1e-16 Score=167.81 Aligned_cols=234 Identities=14% Similarity=0.162 Sum_probs=157.4
Q ss_pred ceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCC-CCCeeEEEccccccCCCCCCCCC-----CcccccCCCCCeEEEEE
Q 008366 41 CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNES-PYNITIHWHGIFQIRSIWADGPN-----MITQCPIRPGNSYTYKF 114 (568)
Q Consensus 41 G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l-~~~~~iH~HG~~~~~~~~~DG~~-----~~~~~~i~PG~~~~y~f 114 (568)
|.....+++||+.. |.|+|++|+ |+||.|.. .+...+|++|..+...+ .||.. .+....|.||||++..+
T Consensus 208 g~~gd~~lvNG~~~-p~l~v~~g~--RlRliNa~~~~~~~l~i~g~~~~vIa-~DGg~~~~P~~~~~l~l~pgeR~dvlv 283 (481)
T 3zx1_A 208 GREGEFVLINGQFK-PKIKLATNE--RIRIYNATAARYLNLRIQGAKFILVG-TDGGLIEKTIYKEELFLSPASRVEVLI 283 (481)
T ss_dssp CCCCSEEEETTEES-CEEEEETTE--EEEEEECCSSCCEEEEETTCEEEEEE-ETTEEEEEEEEESSEEECTTCEEEEEE
T ss_pred CCcCCEEEECCccC-ceEEecCCC--EEEEEecCCCeEEEEEECCCceEEEE-cCCCccCCceEeCeEEECCccEEEEEE
Confidence 33567899999984 999999999 99999996 46788999999876665 69732 23456799999999999
Q ss_pred EeCCCCCceeEecChhhhhh---------cceEEEEEecCCC-CC-----C-CCCCCCCceeEEEeecccCcHHHHHhhc
Q 008366 115 RIINQEGTLWWHAHISMLRA---------TVHGAFIIRPKSG-HK-----Y-PFPKPDKEVPIVLGEWWNDDIMDVANRG 178 (568)
Q Consensus 115 ~~~~~~Gt~~YH~h~~~~~~---------Gl~G~liV~~~~~-~~-----~-~~~~~~~e~~l~~~d~~~~~~~~~~~~~ 178 (568)
++ .+.|+|.+.++...... ....-+.+...+. .+ . +.+..+....+.++.....- ...
T Consensus 284 ~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~lP~~l~~~~~~~~~~~~r~~~l~~~~~~~-----~~~ 357 (481)
T 3zx1_A 284 DA-PKDGNFKLESAYYDRDKMMVKEEPNTLFLANINLKKENVELPKNLKIFKPSEEPKEFKEIIMSEDHMQM-----HGM 357 (481)
T ss_dssp EC-SSCEEEEEEECCCCCCCSSCCCCCCCEEEEEEEEECCCCCCCSCSCCCCCCCCCCEEEEEEEEECCSTT-----TTG
T ss_pred Ec-CCCcEEEEEEecccccCccccCCCCceeEEEEecCCCCccCCccccCCCCCCCCCcEEEEEEeccchhc-----ccc
Confidence 98 77788777665322110 0011112211110 00 0 11112223333332211000 000
Q ss_pred cccCCCC---CCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEe--cCCCC--
Q 008366 179 EITGVGP---RISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAV--DAGYT-- 251 (568)
Q Consensus 179 ~~~g~~~---~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~--DG~~~-- 251 (568)
...+... .....++|||+.+. ...+.+.++.|++++|+|.|.+.. .+.||||||.|+|++. +|...
T Consensus 358 ~~~~~~~~~~~~~~~~~iNG~~~~------~~~~~~~~~~G~~v~w~l~N~~~~-~Hp~HlHG~~F~vl~~~~~g~~~~~ 430 (481)
T 3zx1_A 358 MGKSEGELKIALASMFLINRKSYD------LKRIDLSSKLGVVEDWIVINKSHM-DHPFHIHGTQFELISSKLNGKVQKA 430 (481)
T ss_dssp GGCCHHHHHHHHHTTEEETTBCCC------TTCCCEEEETTCCEEEEEEECSSS-CEEEEETTCCEEEEEEEETTEEEEC
T ss_pred cccccccccccccceeEECCEeCC------CCCceEEeCCCCEEEEEEEcCCCC-ceeEEEeccEEEEEEecccCCCCCc
Confidence 0000000 00124999999763 134679999999999999998755 4559999999999999 99765
Q ss_pred -CcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCC
Q 008366 252 -DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPP 292 (568)
Q Consensus 252 -~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~ 292 (568)
++.++|++.|.||+++.|.++++ +||.|.+|||...+...
T Consensus 431 ~~~~~kDTv~v~Pg~~~~i~~~~d-~pG~w~~HCHil~H~d~ 471 (481)
T 3zx1_A 431 EFRALRDTINVRPNEELRLRMKQD-FKGLRMYHCHILEHEDL 471 (481)
T ss_dssp SSCCEESEEEECTTCEEEEEECCC-SCEEEEEEESSHHHHHT
T ss_pred ccCcccceEEECCCCEEEEEEEcC-CCeeEEEEcCChHHHhc
Confidence 36789999999999999999997 89999999998776543
No 59
>3t6v_A Laccase; beta barrel, oxidoreductase; HET: CBS; 2.00A {Steccherinum ochraceum} PDB: 3t6w_A* 3t6x_A* 3t6z_A* 3t71_A*
Probab=99.68 E-value=1.7e-15 Score=161.88 Aligned_cols=245 Identities=18% Similarity=0.182 Sum_probs=157.8
Q ss_pred eeeEEEECCCC---------CCCeEEEecCCEEEEEEEeCCC-CCeeEEEccccccCCCCCCCCCC----cccccCCCCC
Q 008366 43 QQTITAVNGSL---------PGPTIRVQEGDTLIVHVSNESP-YNITIHWHGIFQIRSIWADGPNM----ITQCPIRPGN 108 (568)
Q Consensus 43 ~~~~~~~NG~~---------pGP~i~v~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~~~~~i~PG~ 108 (568)
....+++||+. +-|.|+|++|+++|+||.|... ....++++|..+...+ .||.+- +....|.|||
T Consensus 167 ~~d~~liNG~g~~~~~~~~~~~~~~~v~~G~~~RlRliN~~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGq 245 (495)
T 3t6v_A 167 TADSTLIDGLGRTHVNVAAVPLSVITVEVGKRYRMRLVSISCDPNYDFSIDGHDMTIIE-TDGVDSQELTVDEIQIFAAQ 245 (495)
T ss_dssp CCSEEEETTBCCBSSSCCCCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESBEEECTTC
T ss_pred CCcEEEECCcCcCCCCcccCCceEEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-eCCcccCCEEeeeEEEcCce
Confidence 46789999973 3379999999999999999864 5678999998877665 699642 3456799999
Q ss_pred eEEEEEEeCCCCCceeEecChhh----hhhcceEEEEEecCCCCCCCCCCCCC-ceeEEEeecccCcHHHHHhhc-cccC
Q 008366 109 SYTYKFRIINQEGTLWWHAHISM----LRATVHGAFIIRPKSGHKYPFPKPDK-EVPIVLGEWWNDDIMDVANRG-EITG 182 (568)
Q Consensus 109 ~~~y~f~~~~~~Gt~~YH~h~~~----~~~Gl~G~liV~~~~~~~~~~~~~~~-e~~l~~~d~~~~~~~~~~~~~-~~~g 182 (568)
|++..+++.+.+|.||..+.... ...|...+++.+.......|...... ... .+.+....+........ ...+
T Consensus 246 R~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~ 324 (495)
T 3t6v_A 246 RYSFVLNANQPVGNYWIRANPNSGGEGFDGGINSAILRYDGATTADPVTVASTVHTK-CLIETDLHPLSRNGVPGNPHQG 324 (495)
T ss_dssp EEEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCSSCSS-BCCGGGCCBSSCCCCSSCSSTT
T ss_pred EEEEEEECCCCCceEEEEEecccCccccCCCceEEEEEECCCCCCCCCCCCCCCCcc-ccccccccccccccCCCccCCC
Confidence 99999998555699999876431 11133345555543221111100000 000 00010000000000000 0000
Q ss_pred CCC--------CCCceEEEcCCCCCCCCCC---------------CCceeEEEEEcCcEEEEEEE-eccCCCeEEEEEcC
Q 008366 183 VGP--------RISDAFTINGMPGDLYPCS---------------ENQTYKLKVEKGKTYLLRII-NAALNNQLFFKIAN 238 (568)
Q Consensus 183 ~~~--------~~~~~~~iNG~~g~~~~~~---------------~~~~~~l~v~~G~~~rlRli-N~~~~~~~~~~i~g 238 (568)
... .....++|||+++...... ......+.++.|++++|.|. |.+.. .+.||+||
T Consensus 325 ~~d~~~~l~~~~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~n~~~~-~HP~HLHG 403 (495)
T 3t6v_A 325 GADCNLNLSLGFACGNFVINGVSFTPPTVPVLLQICSGANTAADLLPSGSVISLPSNSTIEIALPAGAAGG-PHPFHLHG 403 (495)
T ss_dssp CSSEEEECCEEEETTEEEETTBCCCCCSSCHHHHHHTTCCSSTTSSSTTSEEEECTTCEEEEEEECCSSSC-CCEEEETT
T ss_pred CCcEEEEEEEEecCcEEEEcCEecCCCCCcchhhhhcCCcCcccccCCcceEEecCCCEEEEEEccCCCCC-CcceeecC
Confidence 000 0112688999976321100 01235789999999999998 55544 45599999
Q ss_pred ceeEEEEecCCCC----CcEEEeEEEECC-CceEEEEEEeCCCCceeEEEEeeccCCC
Q 008366 239 HKFTVVAVDAGYT----DPYVTDVVVIAP-GQTTDVLLKADQPVGSYYMAARAYAAPP 291 (568)
Q Consensus 239 h~~~via~DG~~~----~p~~~d~~~l~p-g~r~dv~~~~~~~~g~y~~~~~~~~~~~ 291 (568)
|.|+|++.+|... .|...|++.|.+ |+.+.+.|+++ +||.|.+|||...+..
T Consensus 404 h~F~vl~~~g~~~~n~~~P~~rDtv~v~~~g~~~~irf~ad-nPG~W~~HCHi~~H~~ 460 (495)
T 3t6v_A 404 HDFAVSESASNSTSNYDDPIWRDVVSIGGVGDNVTIRFCTD-NPGPWFLHCHIDWHLD 460 (495)
T ss_dssp CCEEEEECTTCCCCCSSSCCEESEEECCSTTCEEEEEEECC-SCEEEEEEESCHHHHH
T ss_pred CcEEEEecCCCCCcccCCCCCccEEEcCCCCcEEEEEEEcC-CCeeEEEEecchhHhh
Confidence 9999999988654 588899999997 99999999999 8999999999876544
No 60
>1zpu_A Iron transport multicopper oxidase FET3; ferroxidase, oxidoreduc; HET: NAG BMA MAN NDG; 2.80A {Saccharomyces cerevisiae}
Probab=99.66 E-value=6.2e-15 Score=159.30 Aligned_cols=245 Identities=13% Similarity=0.087 Sum_probs=156.2
Q ss_pred eeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CCeeEEEccccccCCCCCCCCCC----cccccCCCCCeEEEEEEeC
Q 008366 43 QQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP-YNITIHWHGIFQIRSIWADGPNM----ITQCPIRPGNSYTYKFRII 117 (568)
Q Consensus 43 ~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~~----~~~~~i~PG~~~~y~f~~~ 117 (568)
....+++||+. .|+|+|++|+++|+||.|... ....++++|..+...+ .||.+- +....|.||||++..+++.
T Consensus 166 ~~d~~liNG~~-~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~l~~gqR~dvlv~~~ 243 (534)
T 1zpu_A 166 IPQNLIVNNTM-NLTWEVQPDTTYLLRIVNVGGFVSQYFWIEDHEMTVVE-IDGITTEKNVTDMLYITVAQRYTVLVHTK 243 (534)
T ss_dssp CCSEEEETTBS-SCEEECCSSCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECC
T ss_pred CCceEEECCCC-ceEEEEECCCEEEEEEEeccCCceEEEEEcCCeeEEEe-ccCcCccccEeceEEECccceEEEEEEcC
Confidence 35789999997 499999999999999999974 5678999998877665 699642 3456789999999999984
Q ss_pred CC-CCceeEecChhhhh--------hcceEEEEEecCCCCCCCCCCCCCceeEEEeecccCcH------HHHHhhc---c
Q 008366 118 NQ-EGTLWWHAHISMLR--------ATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDI------MDVANRG---E 179 (568)
Q Consensus 118 ~~-~Gt~~YH~h~~~~~--------~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~------~~~~~~~---~ 179 (568)
+. .|.||......... ..-..+++....... .+.+....+....+.+....+. ....... .
T Consensus 244 ~~~~~~y~i~~~~~~~~~~~~~~~~~~~~~ail~y~~~~~-~p~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~l~~ 322 (534)
T 1zpu_A 244 NDTDKNFAIMQKFDDTMLDVIPSDLQLNATSYMVYNKTAA-LPTQNYVDSIDNFLDDFYLQPYEKEAIYGEPDHVITVDV 322 (534)
T ss_dssp SCSSCCEEEEEEECGGGSSSCCTTCCCEEEEEEESCTTSC-BCCCCCCSCSSCSCCGGGCCBSSCCCCCCSCSEEEEEEE
T ss_pred CCCCCcEEEEEeccccccccCCCCCCcceEEEEEeCCCCC-CCCCCcccccccccccccceeCCCCCCCCCCCeEEEEEE
Confidence 33 47899987654321 011123333322111 0000000000000000000000 0000000 0
Q ss_pred ccCCCCCCCceEEEcCCCCCCCCC--------------C----CCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCcee
Q 008366 180 ITGVGPRISDAFTINGMPGDLYPC--------------S----ENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKF 241 (568)
Q Consensus 180 ~~g~~~~~~~~~~iNG~~g~~~~~--------------~----~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~ 241 (568)
...........++|||+++..... + ......+.++.|++++|.|.|.+...| .||||||.|
T Consensus 323 ~~~~~~~~~~~~~iNg~s~~~~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~ivi~N~~~~~H-P~HLHGh~F 401 (534)
T 1zpu_A 323 VMDNLKNGVNYAFFNNITYTAPKVPTLMTVLSSGDQANNSEIYGSNTHTFILEKDEIVEIVLNNQDTGTH-PFHLHGHAF 401 (534)
T ss_dssp EEEECTTSCEEEEETTBCCCCCSSCHHHHHTTSGGGTTCGGGGCSSSCEEEECTTCEEEEEEEECSSSCE-EEEETTCCE
T ss_pred EeeccCCceeEEEECCCcccCCCCCceeeecccCcccCCCcccCCCceEEEeCCCCEEEEEEeCCCCCCC-CeEecCCce
Confidence 000000112367899997632100 0 001346899999999999999986555 599999999
Q ss_pred EEEEecCC--------------------CCCcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCC
Q 008366 242 TVVAVDAG--------------------YTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPP 292 (568)
Q Consensus 242 ~via~DG~--------------------~~~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~ 292 (568)
+|++.++. ...|...|++.|.+|+.+.|.|+++ +||.|.+|||...+...
T Consensus 402 ~Vl~~~~~~~~~~~G~p~~~~~~~~~~~~~~p~~RDTv~V~pgg~v~IrF~aD-NPG~W~~HCHi~~H~~~ 471 (534)
T 1zpu_A 402 QTIQRDRTYDDALGEVPHSFDPDNHPAFPEYPMRRDTLYVRPQSNFVIRFKAD-NPGVWFFHCHIEWHLLQ 471 (534)
T ss_dssp EEEEECCCCCGGGTCCCCCCBTTBCCCCCSSCEEESEEEECTTCEEEEEEECC-SCEEEEEEECCHHHHHT
T ss_pred EEEeecCCccccccCcccccCccccccccCCCCeeeEEEeCCCCEEEEEEEeC-CCeeEEEEeCchhHhhc
Confidence 99998853 1147889999999999999999998 89999999998776543
No 61
>3pxl_A Laccase; 4-copper protein, metal-binding, oxidoreductase, type-2 Cu-D; HET: NAG BMA MAN; 1.20A {Trametes hirsuta} PDB: 3fpx_A* 3v9c_A* 3div_A* 2h5u_A* 2xyb_A* 1kya_A* 1gyc_A* 2qt6_A* 2hrg_A* 2hrh_A* 4a2f_A* 2vdz_A* 4a2d_A* 4a2e_A* 4a2g_A* 4a2h_A* 2ve0_A* 2vds_A* 2hzh_A* 3kw7_A*
Probab=99.66 E-value=5e-15 Score=158.19 Aligned_cols=242 Identities=16% Similarity=0.143 Sum_probs=156.3
Q ss_pred eeeEEEECCCC--------CCCeEEEecCCEEEEEEEeCCC-CCeeEEEccccccCCCCCCCCC----CcccccCCCCCe
Q 008366 43 QQTITAVNGSL--------PGPTIRVQEGDTLIVHVSNESP-YNITIHWHGIFQIRSIWADGPN----MITQCPIRPGNS 109 (568)
Q Consensus 43 ~~~~~~~NG~~--------pGP~i~v~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~----~~~~~~i~PG~~ 109 (568)
....++|||+. +-|.|+|++|+++|+||.|... ....+|++|..+...+ .||.+ .+....|.||||
T Consensus 165 ~~d~~liNG~~~~~~~~~~~~~~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~via-~DG~~~~P~~~~~l~i~pGqR 243 (499)
T 3pxl_A 165 GADATLINGKGRAPSDSVAELSVIKVTKGKRYRFRLVSLSCNPNHTFSIDGHNLTIIE-VDSVNSQPLEVDSIQIFAAQR 243 (499)
T ss_dssp SCSEEEETTBCCCTTCTTCCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESBEEECTTCE
T ss_pred CCcEEEECCCCcCCCCCCCCcceEEEcCCCEEEEEEEecCCCeeEEEEECCCeEEEEE-ECCcccCceEeeeEEECCCcE
Confidence 46789999973 3379999999999999999964 5678999999887665 69964 234467999999
Q ss_pred EEEEEEeCCCCCceeEecChhh----hhhcceEEEEEecCCCCCCCCCCCCCceeEEEeecccCcHH-----------HH
Q 008366 110 YTYKFRIINQEGTLWWHAHISM----LRATVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDDIM-----------DV 174 (568)
Q Consensus 110 ~~y~f~~~~~~Gt~~YH~h~~~----~~~Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~~~-----------~~ 174 (568)
++..+++.+.+|.||..+.... ...+..-+++.+.......|......... .+.+....+.. ..
T Consensus 244 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~ail~Y~~~~~~~p~~~~~~~~~-~~~~~~L~p~~~~~~p~~~~~~~~ 322 (499)
T 3pxl_A 244 YSFVLDANQAVDNYWIRANPNFGNVGFDGGINSAILRYDGAPAVEPTTNQTTSVK-PLNEVDLHPLVSTPVPGAPSSGGV 322 (499)
T ss_dssp EEEEEECCSCSSEEEEEEEESSSSCSCGGGTTEEEEEETTSCSSCCCCCCCCCSS-BCCGGGCCBSSCCCCSSCSSTTCS
T ss_pred EEEEEECCCCCceEEEEEecccCccccCCCceEEEEEeCCCCCCCCCCCCCCCCc-ccccccccccccccCCCcccCCCC
Confidence 9999998555699998875421 11122234444433221111100000000 00010000000 00
Q ss_pred Hhhc-cccCCCCCCCceEEEcCCCCCCCCC-------C--------CCceeEEEEEcCcEEEEEEE---eccCCCeEEEE
Q 008366 175 ANRG-EITGVGPRISDAFTINGMPGDLYPC-------S--------ENQTYKLKVEKGKTYLLRII---NAALNNQLFFK 235 (568)
Q Consensus 175 ~~~~-~~~g~~~~~~~~~~iNG~~g~~~~~-------~--------~~~~~~l~v~~G~~~rlRli---N~~~~~~~~~~ 235 (568)
.... ...+ .....++|||+++..... + ......+.++.|++++|.|. |.+... +.||
T Consensus 323 d~~~~l~~~---~~~~~w~iNg~s~~~~~~P~L~~~~~g~~~~~~~~~~~~v~~~~~g~~V~ivl~~~~n~~~~~-HP~H 398 (499)
T 3pxl_A 323 DKAINMAFN---FNGSNFFINGASFVPPTVPVLLQILSGAQTAQDLLPSGSVYVLPSNASIEISFPATAAAPGAP-HPFH 398 (499)
T ss_dssp SEEEECCEE---ECSSCEEETTBCCCCCSSCHHHHHHTTCCSTTTSSSTTSEEEECTTCEEEEEEECCTTSCSCS-CEEE
T ss_pred cEEEEEEEE---ecCcEEEEcCEecCCCCCchhhhhhcCCccccccCCCceeEEecCCCEEEEEEecCcccCCCC-ccce
Confidence 0000 0000 011268899997632100 0 01235789999999999999 444444 4599
Q ss_pred EcCceeEEEEecCCCC----CcEEEeEEEECC---CceEEEEEEeCCCCceeEEEEeeccCCC
Q 008366 236 IANHKFTVVAVDAGYT----DPYVTDVVVIAP---GQTTDVLLKADQPVGSYYMAARAYAAPP 291 (568)
Q Consensus 236 i~gh~~~via~DG~~~----~p~~~d~~~l~p---g~r~dv~~~~~~~~g~y~~~~~~~~~~~ 291 (568)
+|||.|+|++.+|... .|...|++.|.+ |+.+.+.|+++ +||.|.+|||...+..
T Consensus 399 LHGh~F~Vl~~~g~~~~n~~~P~~rDtv~v~~~~pg~~~~irf~ad-nPG~W~~HCHi~~H~~ 460 (499)
T 3pxl_A 399 LHGHTFAVVRSAGSTVYNYDNPIFRDVVSTGTPAAGDNVTIRFDTN-NPGPWFLHCHIDFHLE 460 (499)
T ss_dssp ETTCCEEEEECTTCCCCCSSSCCEESEEECCCGGGTCEEEEEEECC-SCEEEEEEESSHHHHH
T ss_pred ecCCcEEEEeccCCcccccCCCCccceEEcCCcCCCcEEEEEEEcC-CCceEEEEeCChhHhh
Confidence 9999999999888643 588999999987 99999999999 8999999999866544
No 62
>3od3_A Blue copper oxidase CUEO; multicopper oxidase, Cu(I) oxidase, oxidoreductase; 1.10A {Escherichia coli} PDB: 1n68_A 2fqd_A* 2fqe_A* 2fqf_A* 2fqg_A* 3nsd_A 1kv7_A 3pau_A 3pav_A 3nsf_A 1pf3_A 3qqx_A 3nsc_A 3nt0_A 3uad_A 3uaa_A 3uac_A 3uab_A 3uae_A 3nsy_A ...
Probab=99.64 E-value=3e-15 Score=158.83 Aligned_cols=254 Identities=14% Similarity=0.118 Sum_probs=161.7
Q ss_pred EEEEEEEEEeeccC--------------ceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CCeeEEE-ccccccCC
Q 008366 27 EHSFQVKNLTIGRL--------------CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP-YNITIHW-HGIFQIRS 90 (568)
Q Consensus 27 ~~~~~~~~~~~~~~--------------G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~-~~~~iH~-HG~~~~~~ 90 (568)
++.|.++.-....+ |.....+++||+.. |.+.+ +|+++|+||.|... +...+++ +|..+...
T Consensus 152 d~~lvl~D~~~~~~g~~~~~~~~~~~~~g~~gd~~lvNG~~~-p~~~v-~g~~~RlRliNas~~~~~~l~i~dg~~~~vI 229 (488)
T 3od3_A 152 DVPVIVQDKKFSADGQIDYQLDVMTAAVGWFGDTLLTNGAIY-PQHAA-PRGWLRLRLLNGCNARSLNFATSDNRPLYVI 229 (488)
T ss_dssp EEEEEEEEECBCTTSSBCCCCSHHHHHHCCCCSEEEETTBSS-CEEEE-EEEEEEEEEEECCSSCCEEEEETTCCCEEEE
T ss_pred ceeEEEEEeeecCCCceeccccccccccCCCCCEEEEcCCcC-ccEec-CCCEEEEEEEccCCCceeeeeecCCCeEEEE
Confidence 56677766544333 33457899999974 88876 67799999999964 5677888 68776655
Q ss_pred CCCCCCC-----CcccccCCCCCeEEEEEEeCCCCCceeEecChhhhhh------c-ceEEEEEec-----CCCC-----
Q 008366 91 IWADGPN-----MITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRA------T-VHGAFIIRP-----KSGH----- 148 (568)
Q Consensus 91 ~~~DG~~-----~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~------G-l~G~liV~~-----~~~~----- 148 (568)
+ .||.. .+....|.||||++..+++ .+.++|+.-........ . -.-.+.|.+ ....
T Consensus 230 a-~DG~~l~~P~~~~~l~l~pGeR~dvlv~~-~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~P~~L~ 307 (488)
T 3od3_A 230 A-SDGGLLPEPVKVSELPVLMGERFEVLVEV-NDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTLS 307 (488)
T ss_dssp E-ETTEEEEEEEEESCEEECTTCEEEEEEEE-CTTCCEEEEECCCSSTTTTSTTTTSCEEEEEEEEEEEECCCCCCSCCC
T ss_pred E-eCCCcccCccEeceEEECCCCEEEEEEEe-CCCceEEEEEeccCCCCcccccccCccceeEecccccCCCCCCCcccc
Confidence 5 59953 2455679999999999999 67778877654221110 1 001222221 1111
Q ss_pred CCC-CCC----CCCceeEEEee-cccCcHHHHHh----hccc------------cCCC--------CCCCceEEEcCCCC
Q 008366 149 KYP-FPK----PDKEVPIVLGE-WWNDDIMDVAN----RGEI------------TGVG--------PRISDAFTINGMPG 198 (568)
Q Consensus 149 ~~~-~~~----~~~e~~l~~~d-~~~~~~~~~~~----~~~~------------~g~~--------~~~~~~~~iNG~~g 198 (568)
..+ .+. ..+.+.+.+.. +.......+.. ..+. .|.. ......++|||+.+
T Consensus 308 ~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~ING~~~ 387 (488)
T 3od3_A 308 SLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGNMNHMNHGGKFDFHHANKINGQAF 387 (488)
T ss_dssp CCCCCCCCTTCCEEEEEEEECHHHHHHHHHHHHHHHGGGGGTTSCHHHHCCCSCCCCCCCSCCCGGGCGGGCEEETTBCC
T ss_pred cCCCCcccccccceEEEEEecccccccccccccccccccccccccccccccccccCccccccccccccccceeeECCeeC
Confidence 001 011 11333443321 00000000000 0000 0100 00012479999976
Q ss_pred CCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCC---cEEEeEEEECCCceEEEEEEeCC
Q 008366 199 DLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTD---PYVTDVVVIAPGQTTDVLLKADQ 275 (568)
Q Consensus 199 ~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~---p~~~d~~~l~pg~r~dv~~~~~~ 275 (568)
+ ...+.++++.|+++||+|+|.+....+.||||||+|+|++.||.... +..+|++.|. |+++.|.++++.
T Consensus 388 ~------~~~~~~~~~~G~~e~w~l~N~~~~~~Hp~HlHg~~F~Vl~~~g~~~~~~~~~~kDTV~v~-g~~~~i~~~f~~ 460 (488)
T 3od3_A 388 D------MNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGTQFRILSENGKPPAAHRAGWKDTVKVE-GNVSEVLVKFNH 460 (488)
T ss_dssp C------TTCCSEECCBSSCEEEEEECTTCCCCEEEEETTCCBEEEEBTTBCCCGGGSSSBSEEEES-SSEEEEEECBCS
T ss_pred C------CCCCceEcCCCCEEEEEEEeCCCCCCccEEEcCceEEEeccCCCccccccCCceeEEEeC-CCEEEEEEEecc
Confidence 4 14567899999999999999986556679999999999999998764 3578999999 999999999973
Q ss_pred ---CCceeEEEEeeccCCC
Q 008366 276 ---PVGSYYMAARAYAAPP 291 (568)
Q Consensus 276 ---~~g~y~~~~~~~~~~~ 291 (568)
++|.|.+|||...+..
T Consensus 461 ~~~~~G~~m~HCH~l~Hed 479 (488)
T 3od3_A 461 DAPKEHAYMAHCHLLEHED 479 (488)
T ss_dssp CCCGGGCEEEEESSHHHHH
T ss_pred CCCCCCCEEEeCCchHHHh
Confidence 4689999999877554
No 63
>2g23_A PHS, phenoxazinone synthase; copper, metalloprotein, laccase, multicopper oxidase, hexamer; 2.30A {Streptomyces antibioticus} PDB: 3gyr_A
Probab=99.63 E-value=1.3e-14 Score=157.86 Aligned_cols=240 Identities=16% Similarity=0.099 Sum_probs=151.8
Q ss_pred eeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CCeeEEEccc-------cccCCCCCCCCCC-----cc------cc
Q 008366 42 RQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP-YNITIHWHGI-------FQIRSIWADGPNM-----IT------QC 102 (568)
Q Consensus 42 ~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~-~~~~iH~HG~-------~~~~~~~~DG~~~-----~~------~~ 102 (568)
.....+++||+. .|.|.|++| ++|+||.|... +...+++.|. .+...+ .||.+. +. ..
T Consensus 252 ~~gd~~lVNG~~-~p~~~V~~g-~yRlRliNas~~r~~~l~i~~h~g~~~~~~~~vIa-~DG~~l~~P~~~~~~~~~~~l 328 (612)
T 2g23_A 252 FFGPYTTVNGRI-WPYADVDDG-WYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG-SDGGLLPRPVPVDFDDTLPVL 328 (612)
T ss_dssp CCCSEEEETTEE-SCEEEEESS-EEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE-ETTEEEEEEEEECSSSSSSSE
T ss_pred CcCCEEEECCcc-CCeEEecCC-eEEEEEEecCCCeEEEEEEcCCCCccCCCcEEEEE-eCCeEccCCEEecccCcccEE
Confidence 456789999997 499999999 99999999964 5678888776 333343 588542 23 56
Q ss_pred cCCCCCeEEEEEEeCCCCCc-eeEecChhhhhhc-----------ceEEEEEecCC-CCCCCCCCCC-------------
Q 008366 103 PIRPGNSYTYKFRIINQEGT-LWWHAHISMLRAT-----------VHGAFIIRPKS-GHKYPFPKPD------------- 156 (568)
Q Consensus 103 ~i~PG~~~~y~f~~~~~~Gt-~~YH~h~~~~~~G-----------l~G~liV~~~~-~~~~~~~~~~------------- 156 (568)
.|.||||++.-+++...+|+ ++..........| ..=-|.|..+. ......+...
T Consensus 329 ~l~pgeR~dvlVd~~~~~g~~~~L~~~~~~~~~g~~~~~~~~~~~~vm~f~V~~~~~~~~~~~P~~L~~~~~~l~~~~~~ 408 (612)
T 2g23_A 329 SAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIPH 408 (612)
T ss_dssp EECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSCC
T ss_pred EECCcCeEEEEEECCCCCCCEEEEEeCCccCCCCccccccCccccceEEEEEccCCCCCCCCCChhhccccccCCccccc
Confidence 79999999999998555675 6655443211101 11124444322 1111111100
Q ss_pred CceeEEEe------------ecccCc---HHHHH---hhccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcE
Q 008366 157 KEVPIVLG------------EWWNDD---IMDVA---NRGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKT 218 (568)
Q Consensus 157 ~e~~l~~~------------d~~~~~---~~~~~---~~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~ 218 (568)
....+.+. .|.... ...+. ......-........++|||+.+. ..+.++++.|++
T Consensus 409 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~iNG~~~~-------~~~~~~v~~G~~ 481 (612)
T 2g23_A 409 GHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTAATFN-------DGLGFTIGEGTH 481 (612)
T ss_dssp EEEEEEECCTTCTTSTTCCCEEEEEEEC-----CCSCTTEEEEECTTSCEEEEEEEECSTT-------SCCCEEEETTCE
T ss_pred ceeEEeeccccccccccccceeeccccccccccccccccceeeeccCCceeEEEECCccCC-------CCCceEecCCCE
Confidence 00111120 010000 00000 000000000011236889999763 457899999999
Q ss_pred EEEEEEeccCCCeEEEEEcCceeEEEEecCC------------------------CC---CcEEEeEEEECCCceEEEEE
Q 008366 219 YLLRIINAALNNQLFFKIANHKFTVVAVDAG------------------------YT---DPYVTDVVVIAPGQTTDVLL 271 (568)
Q Consensus 219 ~rlRliN~~~~~~~~~~i~gh~~~via~DG~------------------------~~---~p~~~d~~~l~pg~r~dv~~ 271 (568)
++|+|+|.+.. .|.||||||.|+|++.+|. .. ++..+|++.|.||+++.|.+
T Consensus 482 v~w~l~N~~~~-~HPiHlHg~~F~Vl~r~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~e~~~kDTv~v~Pg~~~~i~~ 560 (612)
T 2g23_A 482 EQWTFLNLSPI-LHPMHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVMG 560 (612)
T ss_dssp EEEEEEECSSS-CEEEEESSCCEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTSSSCBSEEEECSSEEEEEEE
T ss_pred EEEEEEeCCCC-CCCeEEcCceEEEecccCcccccccccccCcccccccccccccCCCcccccccCeEEECCCcEEEEEE
Confidence 99999999855 4559999999999987542 11 23478999999999999999
Q ss_pred EeCCCCceeEEEEeeccCCCC
Q 008366 272 KADQPVGSYYMAARAYAAPPP 292 (568)
Q Consensus 272 ~~~~~~g~y~~~~~~~~~~~~ 292 (568)
+++.+||.|.+|||...+...
T Consensus 561 ~~~~~pG~w~~HCHil~Hed~ 581 (612)
T 2g23_A 561 KFDGAYGRFMYHCHLLEHEDM 581 (612)
T ss_dssp ECCSCCEEEEEEESSHHHHTT
T ss_pred EeCCCCccEEEEeCchhHhhc
Confidence 999789999999999876654
No 64
>1aoz_A Ascorbate oxidase; oxidoreductase(oxygen acceptor); HET: NAG; 1.90A {Cucurbita pepo var} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 1aso_A* 1asp_A* 1asq_A*
Probab=99.63 E-value=8.6e-15 Score=159.27 Aligned_cols=229 Identities=17% Similarity=0.153 Sum_probs=144.9
Q ss_pred eEEEecCCEEEEEEEeCCC-CCeeEEEccccccCCCCCCCCC----CcccccCCCCCeEEEEEEeC-CCCCceeEecChh
Q 008366 57 TIRVQEGDTLIVHVSNESP-YNITIHWHGIFQIRSIWADGPN----MITQCPIRPGNSYTYKFRII-NQEGTLWWHAHIS 130 (568)
Q Consensus 57 ~i~v~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~----~~~~~~i~PG~~~~y~f~~~-~~~Gt~~YH~h~~ 130 (568)
+|+|++|+++|+||.|... ....+|++|..+...+ .||.+ .+....|.||||++..+++. +.+|.||.+++..
T Consensus 205 ~~~v~~G~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~P~~~~~l~i~pgqR~dvlv~~~~~~~g~y~i~~~~~ 283 (552)
T 1aoz_A 205 IFHVSPKKTYRIRIASTTALAALNFAIGNHQLLVVE-ADGNYVQPFYTSDIDIYSGESYSVLITTDQNPSENYWVSVGTR 283 (552)
T ss_dssp CEEECTTCEEEEEEEECCSSCEEEEEETTCCEEEEE-ETTEEEEEEEESCEEECTTCEEEEEEECCSCTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEEEEEcccccceEEEEEcCcEEEEEE-ECCcccCceEEeEEEEcCCcEEEEEEEcCCCCCCCEEEEEEcc
Confidence 8999999999999999975 4678999999877665 69954 23456799999999999983 4589999998865
Q ss_pred hhh--h-cceEEEEEecCCCCCCCCCCCCCceeEEEeecccCc-HHHHHhhccc---cC----------------CCCCC
Q 008366 131 MLR--A-TVHGAFIIRPKSGHKYPFPKPDKEVPIVLGEWWNDD-IMDVANRGEI---TG----------------VGPRI 187 (568)
Q Consensus 131 ~~~--~-Gl~G~liV~~~~~~~~~~~~~~~e~~l~~~d~~~~~-~~~~~~~~~~---~g----------------~~~~~ 187 (568)
... . ...+.|..........+... ....+ .|.... .......... .. .....
T Consensus 284 ~~~~~~~~~~ail~y~~~~~~~~p~~~-~p~~p----~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 358 (552)
T 1aoz_A 284 ARHPNTPPGLTLLNYLPNSVSKLPTSP-PPQTP----AWDDFDRSKNFTYRITAAMGSPKPPVKFNRRIFLLNTQNVING 358 (552)
T ss_dssp SSCCCSCCEEEEEEETTSCTTSCCSSC-CCCCC----CTTCHHHHHHHHTTCCBCTTCCCCCSSCSEEEEEEEEEEEETT
T ss_pred cCCCCCccEEEEEEECCCCCCCCCCCC-CCCCC----ccccccccccccccccccCCCCCCCCCCcEEEEEEEeeccCCC
Confidence 311 1 12233333222210000000 00000 000000 0000000000 00 00000
Q ss_pred CceEEEcCCCCCCC----------------C----------CCC-----------CceeEEEEEcCcEEEEEEEeccCC-
Q 008366 188 SDAFTINGMPGDLY----------------P----------CSE-----------NQTYKLKVEKGKTYLLRIINAALN- 229 (568)
Q Consensus 188 ~~~~~iNG~~g~~~----------------~----------~~~-----------~~~~~l~v~~G~~~rlRliN~~~~- 229 (568)
...++|||+++..- . |-. .....+.++.|++++|.|.|.+.+
T Consensus 359 ~~~w~iNg~s~~~p~~P~L~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~g~~v~ivi~N~~~~~ 438 (552)
T 1aoz_A 359 YVKWAINDVSLALPPTPYLGAMKYNLLHAFDQNPPPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMK 438 (552)
T ss_dssp EEEEEETTEEECCCSSCHHHHHHTTCTTSSCCSCCCSCCCTTCCTTSCCCCTTCEEECCCEEECTTCEEEEEEEECCCSS
T ss_pred eEEEEECCCccCCCCCCHHHHHhhcCccccccCCCccccccccccccccccccccccceEEEecCCCEEEEEEeCCcccc
Confidence 12477888754210 0 000 012358999999999999998753
Q ss_pred ----CeEEEEEcCceeEEEEe-cCCC----------CCcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCC
Q 008366 230 ----NQLFFKIANHKFTVVAV-DAGY----------TDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPP 292 (568)
Q Consensus 230 ----~~~~~~i~gh~~~via~-DG~~----------~~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~ 292 (568)
..|.||||||.|+|++. +|.+ ..|...|++.|.+|+.+.|.|+++ +||.|.+|||...+...
T Consensus 439 ~~~~~~HP~HLHGh~F~Vl~~g~G~~~~~~~~~~n~~~p~~RDTv~vpp~g~v~Irf~aD-NPG~W~~HCHi~~H~~~ 515 (552)
T 1aoz_A 439 ENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVAD-NPGVWAFHCHIEPHLHM 515 (552)
T ss_dssp TTCCCCEEEEETTCCEEEEEEEESSCCGGGGGGSCCSSCCEESEEEECTTEEEEEEEECC-SCEEEEEEESSHHHHHT
T ss_pred cccCCCCCEEEcCCceEEEecccCccCcccccccccCCCCccCeEEeCCCceEEEEEEcC-CCeEEEEEeeehhHhhC
Confidence 34669999999999998 4553 257889999999999999999999 89999999999776543
No 65
>3aw5_A Multicopper oxidase; beta barrel, oxidoreductase; 2.00A {Pyrobaculum aerophilum}
Probab=99.62 E-value=5.5e-15 Score=156.40 Aligned_cols=218 Identities=14% Similarity=0.142 Sum_probs=147.2
Q ss_pred ceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CCeeEEE--cc---ccccCCCCCCCCCC-----cccccCCCCCe
Q 008366 41 CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP-YNITIHW--HG---IFQIRSIWADGPNM-----ITQCPIRPGNS 109 (568)
Q Consensus 41 G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~-~~~~iH~--HG---~~~~~~~~~DG~~~-----~~~~~i~PG~~ 109 (568)
|.....+++||+.. |.|+|++| ++|+||.|... +...+|+ +| ..+...+ .||.+. +....|.||||
T Consensus 166 ~~~~~~~liNG~~~-p~~~v~~g-~~RlRliNa~~~~~~~~~i~~~~~~~~~~~via-~DG~~~~~P~~~~~l~l~pgeR 242 (448)
T 3aw5_A 166 GFLGNAVLVNGVKD-AVFKLSGG-SYRLRLVNGSNARLYMLSIVKKNGDVVPMRLIA-VDQGFLARPIEVRALFLAPAER 242 (448)
T ss_dssp CCCCSEEEETTEET-CEEEEEEE-EEEEEEEECSSSCCEEEEEEETTSCEECEEEEE-ETTEEEEEEEEESCEEECTTCE
T ss_pred CccccEEEECCccc-ceEEECCC-eEEEEEEcCCCcceEEEEEEcCCCCCccEEEEE-eCCCccCCceEeceEEECCcce
Confidence 44567899999984 99999999 99999999975 5678999 88 6655554 599542 34567899999
Q ss_pred EEEEEEeCCCCCceeEecChhhhh-------------hc-ceE--EEEEecCCCC--CCCCCC-------CCCceeEEEe
Q 008366 110 YTYKFRIINQEGTLWWHAHISMLR-------------AT-VHG--AFIIRPKSGH--KYPFPK-------PDKEVPIVLG 164 (568)
Q Consensus 110 ~~y~f~~~~~~Gt~~YH~h~~~~~-------------~G-l~G--~liV~~~~~~--~~~~~~-------~~~e~~l~~~ 164 (568)
++..+++ + .+.||...+..... .+ -.. .|.+...... +..+.. ...+..+.+.
T Consensus 243 ~dvlv~~-~-~~~y~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~L~~lp~~~~~~~~~~~~~l~ 320 (448)
T 3aw5_A 243 AEVVVEL-G-EGVYLLKNTPFDPMHLEMGHGMQEALPEGSEYTIATFLVEGKGEAVPVEALSDPPPEPPKPTRTRRFALS 320 (448)
T ss_dssp EEEEEEE-C-SEEEEEEECCCCCCCCTTSSCCCCSSCTTSCEEEEEEEEEEECCCCCCCCCSCCCCCCCCCSEEEEEEEE
T ss_pred EEEEEEC-C-CCceEEEccccccccCccccccccccCCCCCceEEEEEEcCCCCCCCccccCCCCCCCCCCCceEEEEEe
Confidence 9999998 4 47888887643210 00 111 1222111110 000000 0011111110
Q ss_pred ecccCcHHHHHhhccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEE-EEcCcEEEEEEEeccCCCeEEEEEcCceeEE
Q 008366 165 EWWNDDIMDVANRGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLK-VEKGKTYLLRIINAALNNQLFFKIANHKFTV 243 (568)
Q Consensus 165 d~~~~~~~~~~~~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~-v~~G~~~rlRliN~~~~~~~~~~i~gh~~~v 243 (568)
.+ ...++|||+++.. ..+.+. ++.|++++|+|.|.+....+.||||||.|+|
T Consensus 321 ----------------~~-----~~~~~iNg~~~~~------~~p~~~~~~~g~~v~~~i~N~~~~~~HP~HLHG~~F~V 373 (448)
T 3aw5_A 321 ----------------LS-----GMQWTINGMFWNA------SNPLFEHVSVEGVELWEIVNDKASMPHPMHLHGFPMWI 373 (448)
T ss_dssp ----------------EE-----TTEEEETTBCCCT------TCTTCCCEEECEEEEEEEEECSSSCCEEEEESSSCBEE
T ss_pred ----------------CC-----CceeeECCCcCCC------CCCceeccCCCCeEEEEEEcCCCCCCcCEEECCceEEE
Confidence 00 1258999997641 234567 9999999999999983334559999999999
Q ss_pred EEecCCCC------------Cc---EEEeEEEECCCceEEEEEEeC----CCCceeEEEEeeccCCCC
Q 008366 244 VAVDAGYT------------DP---YVTDVVVIAPGQTTDVLLKAD----QPVGSYYMAARAYAAPPP 292 (568)
Q Consensus 244 ia~DG~~~------------~p---~~~d~~~l~pg~r~dv~~~~~----~~~g~y~~~~~~~~~~~~ 292 (568)
++.+|... .| ...||+.|.||+++.|.+.+. ++| |.+|||...+...
T Consensus 374 l~~~G~~~~~~~~~~~~~~~~p~~~~~rDTv~v~pg~~~~i~vrF~~~~adnp--w~~HCHil~H~d~ 439 (448)
T 3aw5_A 374 IERKDSPRQVAELAVDNRGRLPTDLGLKDTVLIWPGETVKIVVNFDAKKRGQL--FPFHCHNLEHEDG 439 (448)
T ss_dssp EEEESCCHHHHTTCCSTTCCCGGGGSCBSEEEECTTCEEEEEEEECGGGTTCE--EEEEESSHHHHHT
T ss_pred EEecCCCcccccccccccCCCccccCCccEEEeCCCCEEEEEEEecccCCCCc--EEEEcCChHHHhC
Confidence 99999763 23 589999999999999994442 266 9999999776543
No 66
>2q9o_A Laccase-1; multicopper oxidase, 2-OXOH oxidoreductase; HET: OHI NAG MAN GOL; 1.30A {Melanocarpus albomyces} SCOP: b.6.1.3 b.6.1.3 b.6.1.3 PDB: 3fu7_A* 3fu8_A* 3fu7_B* 1gw0_A* 2ih9_A* 2ih8_A* 3fu9_A* 3qpk_A* 3dkh_A* 3pps_A*
Probab=99.61 E-value=9.3e-14 Score=151.05 Aligned_cols=247 Identities=11% Similarity=0.059 Sum_probs=153.1
Q ss_pred eeeEEEECCCCC--------CCeEEEecCCEEEEEEEeCCC-CCeeEEEccccccCCCCCCCCC----CcccccCCCCCe
Q 008366 43 QQTITAVNGSLP--------GPTIRVQEGDTLIVHVSNESP-YNITIHWHGIFQIRSIWADGPN----MITQCPIRPGNS 109 (568)
Q Consensus 43 ~~~~~~~NG~~p--------GP~i~v~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~----~~~~~~i~PG~~ 109 (568)
....++|||+.. -|.|+|++|+++|+||.|... ....+|++|..+...+ .||.+ .+....|.||||
T Consensus 194 ~~d~~liNG~~~~~~~~~g~~~~~~v~~g~~~RlRliNa~~~~~~~~~i~gh~~~vi~-~DG~~~~p~~~~~l~l~pgeR 272 (559)
T 2q9o_A 194 FSDNVLINGTAVNPNTGEGQYANVTLTPGKRHRLRILNTSTENHFQVSLVNHTMTVIA-ADMVPVNAMTVDSLFLAVGQR 272 (559)
T ss_dssp CBSEEEETTBCBCTTTCCBCCCEEEECTTCEEEEEEEECCSSCCEEEEETTBCEEEEE-ETTEEEEEEEESCEEECTTCE
T ss_pred ccceeEECCccccCcCCCCCceEEEEcCCCEEEEEEEecCCCceEEEEECCCceEEEe-cCCcccCceEeCeEEEccEEE
Confidence 356889999973 379999999999999999975 4678999999877665 69965 234567999999
Q ss_pred EEEEEEeCCCCCceeEecCh--hhh----hhcceEEEEEecCCCCCCCCCC----CC----CceeE-EEeecccCcH---
Q 008366 110 YTYKFRIINQEGTLWWHAHI--SML----RATVHGAFIIRPKSGHKYPFPK----PD----KEVPI-VLGEWWNDDI--- 171 (568)
Q Consensus 110 ~~y~f~~~~~~Gt~~YH~h~--~~~----~~Gl~G~liV~~~~~~~~~~~~----~~----~e~~l-~~~d~~~~~~--- 171 (568)
++..+++...+|.||..... ... ......+++.........|... .+ .+..+ .+........
T Consensus 273 ~dvlv~~~~~~g~y~i~a~~~~~~~~~~~~~~~~~ail~y~~~~~~~P~~~~~~~~~~~~~~~~~l~p~~~~~~p~~~~~ 352 (559)
T 2q9o_A 273 YDVVIDASRAPDNYWFNVTFGGQAACGGSLNPHPAAIFHYAGAPGGLPTDEGTPPVDHQCLDTLDVRPVVPRSVPVNSFV 352 (559)
T ss_dssp EEEEEECCSCSSEEEEEEECCGGGTTCCBSSSCCEEEEEETTSCCSCCCCCCCCCCCCTTCCCSCCCBSSCCBCCCTTCC
T ss_pred EEEEEECCCCCCcEEEEEEeccccccCCCCCCceeEEEEECCCCCCCCCCCCCcCCCcccccccccccCCCCCCCCcccc
Confidence 99999985557899988765 211 1111123333322111111100 00 00000 0000000000
Q ss_pred --HHHHhhccccCCCCCCCceEEEcCCCCCCCCCCC-------------CceeEEEEEcCcEEEEEEEeccC----CCeE
Q 008366 172 --MDVANRGEITGVGPRISDAFTINGMPGDLYPCSE-------------NQTYKLKVEKGKTYLLRIINAAL----NNQL 232 (568)
Q Consensus 172 --~~~~~~~~~~g~~~~~~~~~~iNG~~g~~~~~~~-------------~~~~~l~v~~G~~~rlRliN~~~----~~~~ 232 (568)
..+........ .......++|||+++....-.. .....+.++.++.+++.++|... ...|
T Consensus 353 ~~~~~~~~~~~~~-~~~~~~~~~iNg~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~v~~~vi~n~~~~~~~~~H 431 (559)
T 2q9o_A 353 KRPDNTLPVALDL-TGTPLFVWKVNGSDINVDWGKPIIDYILTGNTSYPVSDNIVQVDAVDQWTYWLIENDPEGPFSLPH 431 (559)
T ss_dssp CCGGGEEEEEEEC-SSSSSCEEEETTBCCCCCTTSCHHHHHHHTCCCCCGGGCEEEECCSSCEEEEEEEECTTSSCCCCE
T ss_pred cceeEEEEEEeec-CCCceEEEEECCEecccCCCCCcHhHhhcCCccCCCCceEEEcCCCCEEEEEEEeCCCccccCCCC
Confidence 00000000000 0112246899999763210000 01235778777666666666643 4456
Q ss_pred EEEEcCceeEEEEecC---------CCC------------CcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCC
Q 008366 233 FFKIANHKFTVVAVDA---------GYT------------DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPP 291 (568)
Q Consensus 233 ~~~i~gh~~~via~DG---------~~~------------~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~ 291 (568)
.||||||.|+|++.++ ... .|...|++.|.+|+++.|.|+++ +||.|.+|||...+..
T Consensus 432 P~HLHGh~F~Vl~~g~~~~~~~~~~g~~~~~~~~~~~n~~~p~~RDTV~Vp~~g~v~IrF~ad-NPG~W~~HCHil~H~~ 510 (559)
T 2q9o_A 432 PMHLHGHDFLVLGRSPDVPAASQQRFVFDPAVDLARLNGDNPPRRDTTMLPAGGWLLLAFRTD-NPGAWLFHCHIAWHVS 510 (559)
T ss_dssp EEEESSSCEEEEEESCCCCTTSCCCCCCCHHHHGGGCCCBSCCEESEEEECTTSEEEEEEECC-SCEEEEEEECCHHHHH
T ss_pred cEEECCCceEEEecccccccccccccccCccccccccccCCCCccceEEccCCccEEEEEEcC-CCeeEEEEecchhHhh
Confidence 6999999999999986 221 46789999999999999999998 8999999999977655
Q ss_pred C
Q 008366 292 P 292 (568)
Q Consensus 292 ~ 292 (568)
.
T Consensus 511 ~ 511 (559)
T 2q9o_A 511 G 511 (559)
T ss_dssp T
T ss_pred c
Confidence 3
No 67
>2wsd_A Spore coat protein A; oxidoreductase, multi-copper oxidase, sporulation, COTA- LAC copper centre; 1.60A {Bacillus subtilis} PDB: 1gsk_A 1hkp_A 1hkz_A 1hl0_A 1hl1_A 1of0_A* 1ogr_A 1uvw_A* 1w6l_A 1w6w_A 1w8e_A 2bhf_A 2x87_A 2x88_A* 4a67_A 4akq_A 4a68_A* 4akp_A* 4a66_A 4ako_A
Probab=99.59 E-value=5e-15 Score=159.63 Aligned_cols=224 Identities=14% Similarity=0.075 Sum_probs=146.2
Q ss_pred eeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCC-CeeEEEccc-cccCCCCCCCCCC-----cccccCCCCCeEEEEE
Q 008366 42 RQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPY-NITIHWHGI-FQIRSIWADGPNM-----ITQCPIRPGNSYTYKF 114 (568)
Q Consensus 42 ~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~-~~~iH~HG~-~~~~~~~~DG~~~-----~~~~~i~PG~~~~y~f 114 (568)
.....+++||+. .|.|.++.| ++|+||.|.... ...+|+.|. .+...+ .||... +....|.||||++..+
T Consensus 228 ~~~d~~liNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~~~i~~~~~~~via-~DG~~~~~P~~~~~l~l~pgeR~dvlv 304 (513)
T 2wsd_A 228 FCGETILVNGKV-WPYLEVEPR-KYRFRVINASNTRTYNLSLDNGGDFIQIG-SDGGLLPRSVKLNSFSLAPAERYDIII 304 (513)
T ss_dssp CCCSEEEETTEE-SCEEECCSS-EEEEEEEECCSSCCEEEEETTCCCEEEEE-ETTEEEEEEEEESEEEECTTCEEEEEE
T ss_pred cccceEEECCcc-cceEEecCC-EEEEEEEccCCcceEEEEECCCCeEEEEc-cCCCcccCceEeCeEEECCeeeEEEEE
Confidence 346789999998 599999885 999999999754 578999887 665554 699432 3456789999999999
Q ss_pred EeCCCCCceeE-ecChh--hhhh-cc-eEEEEEecCC--CC--CCCCCCCC------------CceeEEEeecccCcHHH
Q 008366 115 RIINQEGTLWW-HAHIS--MLRA-TV-HGAFIIRPKS--GH--KYPFPKPD------------KEVPIVLGEWWNDDIMD 173 (568)
Q Consensus 115 ~~~~~~Gt~~Y-H~h~~--~~~~-Gl-~G~liV~~~~--~~--~~~~~~~~------------~e~~l~~~d~~~~~~~~ 173 (568)
++...+|.++. ..... .... .. ...+...... .. ....+... .+..+.+..
T Consensus 305 ~~~~~~g~~~~l~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~~~l~~-------- 376 (513)
T 2wsd_A 305 DFTAYEGESIILANSAGCGGDVNPETDANIMQFRVTKPLAQKDESRKPKYLASYPSVQHERIQNIRTLKLAG-------- 376 (513)
T ss_dssp ECGGGTTCEEEEEECCCSSSSCCTTTTTEEEEEECCSCCSSCCCCCCCSBCSCCGGGCCCCEEEEEEEEEEE--------
T ss_pred ECCCCCCcEEEEEecccccccCCCCCCcceEEEEeccCcccCccCCCCccccCCCCcccCCCcceEEEEEEe--------
Confidence 98444687433 21111 0000 11 1222222111 00 00011000 001111110
Q ss_pred HHhhccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCC----
Q 008366 174 VANRGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAG---- 249 (568)
Q Consensus 174 ~~~~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~---- 249 (568)
. .+ ......++|||+.+. ....+.++.|++++|+|.|.+... |.||||||.|+|++.+|.
T Consensus 377 ----~--~~--~~g~~~~~iNg~~~~-------~~~~~~~~~g~~~~w~l~N~~~~~-HP~HlHG~~F~Vl~~~~~~~~~ 440 (513)
T 2wsd_A 377 ----T--QD--EYGRPVLLLNNKRWH-------DPVTETPKVGTTEIWSIINPTRGT-HPIHLHLVSFRVLDRRPFDIAR 440 (513)
T ss_dssp ----E--EC--TTSCEEEEETTBCTT-------SCCCBCCBTTCEEEEEEEECSSSC-EEEEESSCCEEEEEEEEBCHHH
T ss_pred ----e--cC--CCCCceEeECCccCC-------CcccEecCCCCEEEEEEEcCCCCC-cCEeEeCceEEEEEecCccccc
Confidence 0 00 001125789999763 234568999999999999998654 559999999999998751
Q ss_pred ------------CC-----CcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCCC
Q 008366 250 ------------YT-----DPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPPP 292 (568)
Q Consensus 250 ------------~~-----~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~~ 292 (568)
.. .+...|++.|.||+++.|.+.++++||.|.+|||...+...
T Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~rDTv~v~pg~~~~i~~~f~dnpG~w~~HCHil~H~~~ 500 (513)
T 2wsd_A 441 YQESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRIAATFGPYSGRYVWHCHALEHEDY 500 (513)
T ss_dssp HHHHCCCCBSSCCBCCCGGGSSCBSEEEECTTEEEEEEEECCSCCEEEEEEESCHHHHTT
T ss_pred ccccccccccCCCCCCCccccCcccEEEeCCCCEEEEEEEecCCCCCEEEEcCChhhhhc
Confidence 00 23478999999999999999996589999999999876654
No 68
>3abg_A Bilirubin oxidase; cleavage on PAIR of basic residues, glyco metal-binding, oxidoreductase; HET: NAG BMA NDG; 2.30A {Myrothecium verrucaria} PDB: 2xll_A*
Probab=99.52 E-value=9.6e-14 Score=149.79 Aligned_cols=242 Identities=14% Similarity=0.074 Sum_probs=150.3
Q ss_pred eeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CCeeEEEcc-------ccccCCCCCCCCC-----CcccccCCCCCe
Q 008366 43 QQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP-YNITIHWHG-------IFQIRSIWADGPN-----MITQCPIRPGNS 109 (568)
Q Consensus 43 ~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~-~~~~iH~HG-------~~~~~~~~~DG~~-----~~~~~~i~PG~~ 109 (568)
....+++||+. .|.|.|+.| ++|+||.|... +...++++| ..+...+ .||.. .+....|.||||
T Consensus 200 ~gd~~lvNG~~-~p~~~v~~~-~~RlRliNa~~~~~~~l~i~~~~~~~~~h~~~vIa-~DG~~~~~P~~~~~l~l~pgeR 276 (534)
T 3abg_A 200 WGDVIHVNGQP-WPFKNVEPR-KYRFRFLDAAVSRSFGLYFADTDAIDTRLPFKVIA-SDSGLLEHPADTSLLYISMAER 276 (534)
T ss_dssp CCSEEEETTEE-SCBCBCCSS-EEEEEEEECCSSCCEEEEECCSSSTTCCCCEEEEE-ETTEEEEEEEEESCEEECTTCE
T ss_pred cCceeccCCcc-CceEEecCc-EEEEEEEecCCcceEEEEEecccCcCCCccEEEEE-eCCCcccCceEeceEEECCccE
Confidence 46789999997 599999985 99999999975 456899976 4444444 59853 245567999999
Q ss_pred EEEEEEeCCCCC-ceeEecChhhhh------h--cceEEEEEecCCCC----CCCCCCCCCceeEEEeecccCcHHHHHh
Q 008366 110 YTYKFRIINQEG-TLWWHAHISMLR------A--TVHGAFIIRPKSGH----KYPFPKPDKEVPIVLGEWWNDDIMDVAN 176 (568)
Q Consensus 110 ~~y~f~~~~~~G-t~~YH~h~~~~~------~--Gl~G~liV~~~~~~----~~~~~~~~~e~~l~~~d~~~~~~~~~~~ 176 (568)
++..+++...+| +||......... . ...+.+-....... ....+...+... ... ... ....
T Consensus 277 ~dvlv~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~P~~L~~~~--~p~--~~~--~~~~ 350 (534)
T 3abg_A 277 YEVVFDFSDYAGKTIELRNLGGSIGGIGTDTDYDNTDKVMRFVVADDTTQPDTSVVPANLRDVP--FPS--PTT--NTPR 350 (534)
T ss_dssp EEEEEECSSCTTSEEEEECCCCSSSSCCSCSSSTTTSEEEEEECCCCSSCSCCCCCCCCCCCCS--CCC--CCC--CCCE
T ss_pred EEEEEEcCCCCCceEEEEeccccccccccccCcCCcceeEEEecCCCCcCCCCCCCccccccCC--CCC--Ccc--ccce
Confidence 999999854478 577665321000 0 01122222211110 000000000000 000 000 0000
Q ss_pred hccccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEe-cCC---CCC
Q 008366 177 RGEITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAV-DAG---YTD 252 (568)
Q Consensus 177 ~~~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~-DG~---~~~ 252 (568)
.. ..+. ....++|||+++... .....+.++.|++++|.|.|.+....|.||||||.|+|++. +|. ...
T Consensus 351 ~~-~~~~---~~~~w~iNG~~f~~~----~~p~l~~v~~G~~~~w~i~N~~~~~~HP~HLHG~~F~Vl~~~~g~~~~~~~ 422 (534)
T 3abg_A 351 QF-RFGR---TGPTWTINGVAFADV----QNRLLANVPVGTVERWELINAGNGWTHPIHIHLVDFKVISRTSGNNARTVM 422 (534)
T ss_dssp EE-ECSC---CCSTTCCCCBTTBCT----TSCCCCEECTTCEEEEEEEECSSSCCCCEEESSCCEEEEEESSCCSSSCCC
T ss_pred EE-EEec---cCceeEECCcccCCC----CCcceeeccCCCEEEEEEEcCCCCCCcCEEECCeeEEEEEEcCCCCcCcCC
Confidence 00 0000 112578999975310 11235689999999999999985545559999999999998 663 111
Q ss_pred ---cEEEeEEEECCCceEEEEEE-eCCCCceeEEEEeeccCCCCccccCCCcceEEEEEEcC
Q 008366 253 ---PYVTDVVVIAPGQTTDVLLK-ADQPVGSYYMAARAYAAPPPTIVAFDNTTTRGIVVYDG 310 (568)
Q Consensus 253 ---p~~~d~~~l~pg~r~dv~~~-~~~~~g~y~~~~~~~~~~~~~~~~~~~~~~~ail~y~~ 310 (568)
....|++.|.||+++.|.+. ++ +||.|.+|||...+... +..+.+.+..
T Consensus 423 ~~~~~~rDTV~v~pg~~v~I~~~~ad-npG~w~~HCHil~H~d~--------GMm~~~~V~~ 475 (534)
T 3abg_A 423 PYESGLKDVVWLGRRETVVVEAHYAP-FPGVYMFHCHNLIHEDH--------DMMAAFNATV 475 (534)
T ss_dssp SGGGSCBSEECCCSSEEEEEEEECCS-CCEEEEEEESCHHHHHT--------TCEEEEEECS
T ss_pred ccccCCcCeEEcCCCCEEEEEEEECC-CCccEEEecChHHHHhc--------CCceEEEEEe
Confidence 25689999999999999998 66 89999999999876543 2445566654
No 69
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.49 E-value=1.2e-14 Score=122.22 Aligned_cols=90 Identities=20% Similarity=0.152 Sum_probs=69.7
Q ss_pred CCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCC--CCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecC
Q 008366 51 GSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRS--IWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAH 128 (568)
Q Consensus 51 G~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~--~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h 128 (568)
-++++|+|++++||+|+ +.|.+..++++||||...... ..+||.+ ..++.|.||++++|.|.+++++|+||||||
T Consensus 14 ~~f~p~~i~v~~Gd~V~--~~N~~~~~H~v~~~~~~~~~~~g~~~~~~~-~~~~~i~pG~~~~~~f~~~~~~G~y~y~C~ 90 (105)
T 3cvb_A 14 FQFEPANVTVHPGDTVK--WVNNKLPPHNILFDDKQVPGASKELADKLS-HSQLMFSPGESYEITFSSDFPAGTYTYYCA 90 (105)
T ss_dssp SCEESSEEEECTTEEEE--EEECSSCCEEEEECTTSSGGGCHHHHHHHC-EEEEECSTTCEEEEEECTTSCSEEEEEECT
T ss_pred cEEeCCEEEEcCCCEEE--EEECCCCCCeEEEeCCCCCccccccccccc-ccccccCCCCeEEEEEecCCCCeeEEEEeC
Confidence 36677999999999975 679988999999999875431 0112222 245689999999999987568999999999
Q ss_pred hhhhhhcceEEEEEec
Q 008366 129 ISMLRATVHGAFIIRP 144 (568)
Q Consensus 129 ~~~~~~Gl~G~liV~~ 144 (568)
.+. ..||.|.|+|.+
T Consensus 91 ~H~-~~GM~G~i~V~~ 105 (105)
T 3cvb_A 91 PHR-GAGMVGKITVEG 105 (105)
T ss_dssp TTG-GGTCEEEEEECC
T ss_pred Cch-hcCCEEEEEEcC
Confidence 543 339999999964
No 70
>3sqr_A Laccase; multicopper oxidase, glycosylation, oxidoreductase; HET: NAG BMA MAN; 1.67A {Botrytis aclada}
Probab=99.48 E-value=4e-12 Score=137.54 Aligned_cols=241 Identities=14% Similarity=0.048 Sum_probs=151.7
Q ss_pred eeEEEECCCCC----------------CCeEEEecCCEEEEEEEeCCC-CCeeEEEccccccCCCCCCCCC----Ccccc
Q 008366 44 QTITAVNGSLP----------------GPTIRVQEGDTLIVHVSNESP-YNITIHWHGIFQIRSIWADGPN----MITQC 102 (568)
Q Consensus 44 ~~~~~~NG~~p----------------GP~i~v~~Gd~v~i~l~N~l~-~~~~iH~HG~~~~~~~~~DG~~----~~~~~ 102 (568)
...+++||+.. -++|++++|+++|+||.|... ....++++|..+...+ .||.+ .+...
T Consensus 225 ~d~~liNG~~~~~c~~~~~~~~~~~~~~~~~~v~~G~~yRlRlINa~~~~~~~~~i~gh~~~VIa-~DG~~v~P~~~~~l 303 (580)
T 3sqr_A 225 LENTLMNGTNTFDCSASTDPNCVGGGKKFELTFVEGTKYRLRLINVGIDSHFEFAIDNHTLTVIA-NDLVPIVPYTTDTL 303 (580)
T ss_dssp BSEEEETTBCCCCCTTCCCTTBCCCCCCCEEECCTTCEEEEEEEECCSSCCEEEEETTCCEEEEE-ETTEEEEEEEESSE
T ss_pred CceEEECCcccCCCccccccccccCCCceeEEEcCCCEEEEEEEeccCCceeeEEeCCceEEEEE-eCCccCCceEeeEE
Confidence 46789999742 379999999999999999975 4568999999887665 69965 23446
Q ss_pred cCCCCCeEEEEEEeCCCCCceeEecChhh-----hhhcceEEEEEecCCCCCCCCCCC--CCceeEEEee--cccCcH--
Q 008366 103 PIRPGNSYTYKFRIINQEGTLWWHAHISM-----LRATVHGAFIIRPKSGHKYPFPKP--DKEVPIVLGE--WWNDDI-- 171 (568)
Q Consensus 103 ~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~-----~~~Gl~G~liV~~~~~~~~~~~~~--~~e~~l~~~d--~~~~~~-- 171 (568)
.|.||||++..+++.+.+|.||....... ...+-.-+++.+.......|.... ..+.. +.+ ....+.
T Consensus 304 ~i~pGqRydVlv~a~~~~g~Y~i~a~~~~~~~~~~~~~~~~aiL~Y~~~~~~~P~~~~~~~~~~~--~~~~~~~L~P~~~ 381 (580)
T 3sqr_A 304 LIGIGQRYDVIVEANAAADNYWIRGNWGTTCSTNNEAANATGILRYDSSSIANPTSVGTTPRGTC--EDEPVASLVPHLA 381 (580)
T ss_dssp EECTTCEEEEEEECCSCSSEEEEECCCCTTTSCBTTGGGCEEEEESSTTCCCCCCCCCCCCCCCS--CCSCGGGCCBSSC
T ss_pred EEccceEEEEEEEeCCCCCeEEEEEecccccCccCCCCceEEEEEECCCCCCCCCCCCCCccchh--hcccccccccCCC
Confidence 78999999999998656799999976542 111222344555322211111000 00000 000 000000
Q ss_pred HHHHhh-----ccccCCCCCCCceEEEcCCCCCCCCCC--------C-----CceeEEEE----EcCcEEEEEEEecc--
Q 008366 172 MDVANR-----GEITGVGPRISDAFTINGMPGDLYPCS--------E-----NQTYKLKV----EKGKTYLLRIINAA-- 227 (568)
Q Consensus 172 ~~~~~~-----~~~~g~~~~~~~~~~iNG~~g~~~~~~--------~-----~~~~~l~v----~~G~~~rlRliN~~-- 227 (568)
..+... ....+ ....-.+.|||.++....-. + .....+.+ +.|+++.|.|-|.+
T Consensus 382 ~~~~~~~~~~~~l~~~--~~~~~~w~iN~~s~~~~~~~P~L~~~~~g~~~~~~~~~~~~~~~~~~~~~~VeiVi~n~~~~ 459 (580)
T 3sqr_A 382 LDVGGYSLVDEQVSSA--FTNYFTWTINSSSLLLDWSSPTTLKIFNNETIFPTEYNVVALEQTNANEEWVVYVIEDLTGF 459 (580)
T ss_dssp CBCCSEEEEEEEEEEE--ESSSEEEEETTBCCCCCTTSCHHHHHHTTCCCCCGGGCEEEECC----CCEEEEEEEECSSS
T ss_pred CCCCCccceEEEEEec--cCCceeEEECCEecccCCCCCchhhhhcCCccCCCCcceeecccccCCCcEEEEEEeCCCcc
Confidence 000000 00000 01123577899875310000 0 01112344 46999999999987
Q ss_pred CCCeEEEEEcCceeEEEEecCC------------CCCcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeeccCCC
Q 008366 228 LNNQLFFKIANHKFTVVAVDAG------------YTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYAAPP 291 (568)
Q Consensus 228 ~~~~~~~~i~gh~~~via~DG~------------~~~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~~~~ 291 (568)
.. .+.||+|||.|+|++.... +..|...|++.+.+++.+.|.|+++ +||.|.+|||...+..
T Consensus 460 ~~-~HP~HLHGh~F~vv~~g~G~f~~~~~~~~~nl~nP~~rDTv~v~~~g~~~irf~ad-NPG~W~~HCHi~~H~~ 533 (580)
T 3sqr_A 460 GI-WHPIHLHGHDFFIVAQETDVFNSDESPAKFNLVNPPRRDVAALPGNGYLAIAFKLD-NPGSWLLHCHIAWHAS 533 (580)
T ss_dssp CC-CEEEEESSCCEEEEEEESSCCCTTTSGGGCCCBSCCEESEEEECTTSEEEEEEESC-SCEEEEEEECSHHHHH
T ss_pred cc-ceeeEecCceEEEEecCCCccCccccccccccCCCceeeEEEeCCCceEEEEEEcC-CCeeeEEEECcHHHhh
Confidence 44 4569999999999998432 2257889999999999999999999 9999999999876554
No 71
>3gyr_A PHS, phenoxazinone synthase; metalloprotein, laccase, multicopper oxidase, hexamer, oxidoreductase, antibiotic biosynthesis; 2.30A {Streptomyces antibioticus}
Probab=99.42 E-value=7.9e-12 Score=138.17 Aligned_cols=241 Identities=13% Similarity=0.047 Sum_probs=141.8
Q ss_pred ceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCC-CCeeEEEcccc-------ccCCCCCCCCC-----------Cccc
Q 008366 41 CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESP-YNITIHWHGIF-------QIRSIWADGPN-----------MITQ 101 (568)
Q Consensus 41 G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~-~~~~iH~HG~~-------~~~~~~~DG~~-----------~~~~ 101 (568)
|......++||+. .|.+.++. .++|+||.|... +...+.+-+.. +...+ .||.. .++.
T Consensus 251 ~~~gd~~~vNG~~-~p~~~v~~-~~yRlRliNas~~~~~~l~i~~h~~~~~~~~~~vIa-~DG~~l~~Pv~v~~p~~~~~ 327 (612)
T 3gyr_A 251 PFFGPYTTVNGRI-WPYADVDD-GWYRLRLVNASNARIYNLVLIDEDDRPVPGVVHQIG-SDGGLLPRPVPVDFDDTLPV 327 (612)
T ss_dssp CCCCSEEEETTEE-SCEEEEES-SEEEEEEEECCSSCCEEEEEECTTSCBCTTSEEEEE-ETTEEEEEEEEECSSSSSSS
T ss_pred CccCceeeecCCc-cceEeccC-cEEEEEEEeccCCcceeEEEccCCCccCCceEEEEE-eCCCccccceeccCcccccE
Confidence 3456788999997 49999875 489999999964 45566665542 22333 48832 1234
Q ss_pred ccCCCCCeEEEEEEeCCCCCceeEecChhh-h--------hhc-ceE--EEEEecCCC-CCCCCCC------------CC
Q 008366 102 CPIRPGNSYTYKFRIINQEGTLWWHAHISM-L--------RAT-VHG--AFIIRPKSG-HKYPFPK------------PD 156 (568)
Q Consensus 102 ~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~-~--------~~G-l~G--~liV~~~~~-~~~~~~~------------~~ 156 (568)
..|.||||++..+++.+.+|.+|+-..... . ... ... .+.+.+... .....+. ..
T Consensus 328 l~i~pGeRydVlV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 407 (612)
T 3gyr_A 328 LSAAPAERFDLLVDFRALGGRRLRLVDKGPGAPAGTPDPLGGVRYPEVMEFRVRETCEEDSFALPEVLSGSFRRMSHDIP 407 (612)
T ss_dssp EEECTTCEEEEEEECTTCTTCEEEEEECCTTSCTTSCBGGGTBSCCEEEEEEEECCSCCCCCCCCSSCCSSCCCCCTTSC
T ss_pred EEeccceEEEEEEECCCCCceEEEEEecCCcCCcCccCccccccccceeeecccCCCCCCcccccccccccccccccccc
Confidence 679999999999998555565554322111 0 000 011 122222111 0000000 00
Q ss_pred Cc-eeEEEeecccCc-------------HHHHHhhc-----cccCCCCCCCceEEEcCCCCCCCCCCCCceeEEEEEcCc
Q 008366 157 KE-VPIVLGEWWNDD-------------IMDVANRG-----EITGVGPRISDAFTINGMPGDLYPCSENQTYKLKVEKGK 217 (568)
Q Consensus 157 ~e-~~l~~~d~~~~~-------------~~~~~~~~-----~~~g~~~~~~~~~~iNG~~g~~~~~~~~~~~~l~v~~G~ 217 (568)
.. ....+..-.... ........ ............+.+||+.+. ....+.++.|+
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~-------~~~~~~~~~g~ 480 (612)
T 3gyr_A 408 HGHRLIVLTPPGTKGSGGHPEIWEMAEVEDPADVQVPAEGVIQVTGADGRTKTYRRTARTFN-------DGLGFTIGEGT 480 (612)
T ss_dssp CEEEEEEEECTTCTTTTTCCEEEEEEECC-----CCSCTTEEEEECTTSCEEEEEEEECSTT-------SCCCEEEETTC
T ss_pred cccccccccccccccccccccccccccccccccccccccceeeeccCCCccccccccCccCC-------CCcceEeCCCC
Confidence 00 011110000000 00000000 000001112335677887542 34678999999
Q ss_pred EEEEEEEeccCCCeEEEEEcCceeEEEEecCCCC---------------------------CcEEEeEEEECCCceEEEE
Q 008366 218 TYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT---------------------------DPYVTDVVVIAPGQTTDVL 270 (568)
Q Consensus 218 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~---------------------------~p~~~d~~~l~pg~r~dv~ 270 (568)
+++|.|.|.+...|. ||||||+|+||+.+|... ++..+|++.|.+|+.+.|.
T Consensus 481 ~~~w~i~N~~~~~HP-~HLHG~~F~Vl~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kDTv~v~~~~~v~i~ 559 (612)
T 3gyr_A 481 HEQWTFLNLSPILHP-MHIHLADFQVLGRDAYDASGFDLALGGTRTPVRLDPDTPVPLAPNELGHKDVFQVPGPQGLRVM 559 (612)
T ss_dssp EEEEEEEECSSSCEE-EEESSCEEEEEEEEEEECTTEETTTTEESSCEEEEEEEECCCCTTCSSCBSEEEECSSEEEEEE
T ss_pred EEEEEEEcCCCCCcC-EeECCCcEEEEeecCCcCccccccccccccccccccccccCcccccCCCCcEEEECCCCEEEEE
Confidence 999999999977665 999999999999876421 1235799999999999999
Q ss_pred EEeCCCCceeEEEEeeccCCCC
Q 008366 271 LKADQPVGSYYMAARAYAAPPP 292 (568)
Q Consensus 271 ~~~~~~~g~y~~~~~~~~~~~~ 292 (568)
+++.++||.|.+|||...+...
T Consensus 560 ~rfadnpG~w~~HCHil~Hed~ 581 (612)
T 3gyr_A 560 GKFDGAYGRFMYHCHLLEHEDM 581 (612)
T ss_dssp EECCSCCEEEEEEESSHHHHHT
T ss_pred EEeCCCCcceEEcCCChHHHhC
Confidence 9965589999999999887654
No 72
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=99.40 E-value=1.5e-12 Score=110.55 Aligned_cols=92 Identities=21% Similarity=0.213 Sum_probs=73.5
Q ss_pred cCceeeeE-EEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeC
Q 008366 39 RLCRQQTI-TAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRII 117 (568)
Q Consensus 39 ~~G~~~~~-~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~ 117 (568)
.+|+.... .++|++++.|.|++++||+|+++++|.....+++...+. |. +..+.||++++|.|++
T Consensus 20 ~~~v~~~~~~~~~~~f~p~~i~v~~G~~V~~~~~n~d~~~H~~~i~~~---------~~----~~~i~pG~~~~~~f~~- 85 (112)
T 1iby_A 20 VEGVTVKNIRAFNVLNEPETLVVKKGDAVKVVVENKSPISEGFSIDAF---------GV----QEVIKAGETKTISFTA- 85 (112)
T ss_dssp ETTEEEEEEEEEEEEEESCEEEEETTCEEEEEEEECSSSCEEEEEGGG---------TE----EEEECTTCEEEEEEEC-
T ss_pred eccEEEEEEEEEeeEEcCCEEEEeCCCEEEEEEEECCCCeEEEEEcCC---------Cc----eeEeCCCCEEEEEEEC-
Confidence 34666666 489999988999999999999999999765444443322 22 3579999999999997
Q ss_pred CCCCceeEecChhhhhhcceEEEEEec
Q 008366 118 NQEGTLWWHAHISMLRATVHGAFIIRP 144 (568)
Q Consensus 118 ~~~Gt~~YH~h~~~~~~Gl~G~liV~~ 144 (568)
+++|+||||||.+....+|.|.|+|.+
T Consensus 86 ~~~G~y~~~C~~~~~~~~M~g~i~V~~ 112 (112)
T 1iby_A 86 DKAGAFTIWCQLHPKNIHLPGTLNVVE 112 (112)
T ss_dssp CSCEEEEEBCSSSCTTTBCCEEEEEEC
T ss_pred CCCEEEEEECCCCCchHHCEEEEEEeC
Confidence 899999999998876556999999964
No 73
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=99.30 E-value=7.6e-12 Score=112.09 Aligned_cols=99 Identities=16% Similarity=0.150 Sum_probs=69.8
Q ss_pred CceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCC------CCCc-ccccCCCCC--eE
Q 008366 40 LCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADG------PNMI-TQCPIRPGN--SY 110 (568)
Q Consensus 40 ~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG------~~~~-~~~~i~PG~--~~ 110 (568)
-|+....+.++|. ++|+|+|++||+|+++++|... ...|.+.+......+.+. .++. ....|.||+ +.
T Consensus 46 ~~~~~~~~~~~g~-~~p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~PG~sgt~ 122 (154)
T 2cal_A 46 PGFPFPSFEVHDK-KNPTLEIPAGATVDVTFINTNK--GFGHSFDITKKGPPYAVMPVIDPIVAGTGFSPVPKDGKFGYT 122 (154)
T ss_dssp TTSCSSCEEETTE-ESCEEEECTTCEEEEEEEECCT--TCCCCCEEESCCSCCCSSCCCCSEEEEBCCCCCCBTTBEEEE
T ss_pred cCCccccccccCC-CCCEEEEeCCCEEEEEEEcCCC--CeeeEEEEeecCcchhccccccccccccccccccCCCCceEE
Confidence 3556666677777 5799999999999999999732 224444444333332110 0000 002689999 99
Q ss_pred EEEEEeCCCCCceeEecChhhhhh-cceEEEEEe
Q 008366 111 TYKFRIINQEGTLWWHAHISMLRA-TVHGAFIIR 143 (568)
Q Consensus 111 ~y~f~~~~~~Gt~~YH~h~~~~~~-Gl~G~liV~ 143 (568)
+|.|++ ++|+||||||..++.. ||+|.|+|+
T Consensus 123 t~tft~--~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 123 DFTWHP--TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EEEECC--CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEEEE--CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 999985 9999999999877766 999999984
No 74
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.22 E-value=2.8e-11 Score=129.79 Aligned_cols=96 Identities=21% Similarity=0.277 Sum_probs=74.3
Q ss_pred CceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCC
Q 008366 40 LCRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQ 119 (568)
Q Consensus 40 ~G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~ 119 (568)
++++..+|++|+++|+|.|++++||+|+++|+|.+...-. +||+.... .|+ ...+.||++++|.|++ ++
T Consensus 497 ~~v~V~m~~~n~~f~pp~I~V~~Gd~V~~~ltN~d~~~Dv--~Hgf~ip~----~gv----~~~i~PG~t~t~~Fta-~~ 565 (595)
T 1fwx_A 497 NKVRVYMSSVAPSFSIESFTVKEGDEVTVIVTNLDEIDDL--THGFTMGN----YGV----AMEIGPQMTSSVTFVA-AN 565 (595)
T ss_dssp TEEEEEEEEETTEESCSEEEEETTCEEEEEEEECCCSTTC--CEEEEETT----TTE----EEEECTTCEEEEEEEC-CS
T ss_pred CccceeEEEecCcccCCEEEEECCCEEEEEEEeCCCCCCc--eeeEEecC----CCc----ceeeCCCCeEEEEEEC-CC
Confidence 4688999999999999999999999999999998643111 24444322 222 1579999999999998 99
Q ss_pred CCceeEecChh-hhh-hcceEEEEEecCC
Q 008366 120 EGTLWWHAHIS-MLR-ATVHGAFIIRPKS 146 (568)
Q Consensus 120 ~Gt~~YH~h~~-~~~-~Gl~G~liV~~~~ 146 (568)
+|+||||||.. +.. .||+|.|+|.+++
T Consensus 566 pGtY~yhC~e~Cg~~H~gM~G~IiV~p~~ 594 (595)
T 1fwx_A 566 PGVYWYYCQWFCHALHMEMRGRMLVEPKE 594 (595)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC-
T ss_pred CEEEEEECCCCCCCCccCCEEEEEEEcCC
Confidence 99999999932 222 2999999998764
No 75
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=99.13 E-value=5.9e-11 Score=104.79 Aligned_cols=95 Identities=16% Similarity=0.140 Sum_probs=72.3
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCC-CCceeecCCcEEEE--------EeCC-CCCCCCCCCCCCcCCCCCceeeEEeCCC
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVE-SHPMHLHGYDFYVL--------AQGF-GNYNASRDSKNFNLVNPQRRNTIAVPIG 513 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~-~HP~HlHG~~F~Vv--------~~~~-g~~~~~~~~~~~~~~~p~~rDTv~vp~~ 513 (568)
..+.++.|++|+|+|.|.+. . .|.||+|+....+. ..+. ..+.+. -....++|+..|.|+
T Consensus 35 ~~i~v~~G~~V~~~~~N~~~---~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~-------~~~~~~~~t~~l~pG 104 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNSA---VQQHNWILVKGGEAEAANIANAGLSAGPAANYLPA-------DKSNIIAESPLANGN 104 (139)
T ss_dssp SEEEECTTCEEEEEEECCCS---SCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCS-------CCTTEEEECCCBCTT
T ss_pred CeEEECCCCEEEEEEEeCCC---CCCeeEEEeccccccchhhhhhhhcccccccccCc-------ccccccccccccCCC
Confidence 55689999999999999764 6 89999998643110 0000 011110 012357899999999
Q ss_pred cEEEEEEEecCceeEEEEeecccccccccEEEEEEe
Q 008366 514 GWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 514 g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
....+.|.+++||.|.||||+..|.+ ||+..|+|+
T Consensus 105 et~~v~f~~~~pG~y~f~C~~~~H~~-GM~G~i~V~ 139 (139)
T 2aan_A 105 ETVEVTFTAPAAGTYLYICTVPGHYP-LMQGKLVVN 139 (139)
T ss_dssp CEEEEEEECCSSEEEEEECCSTTTTT-TSEEEEEEC
T ss_pred CEEEEEEECCCCeEEEEEcCCCChHH-cCEEEEEEC
Confidence 99999999999999999999999999 999999884
No 76
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=99.10 E-value=2.8e-10 Score=95.22 Aligned_cols=79 Identities=18% Similarity=0.308 Sum_probs=62.4
Q ss_pred CCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecCh
Q 008366 50 NGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI 129 (568)
Q Consensus 50 NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~ 129 (568)
+.++..+.|++++||+|++ .|....+|++|+++. +||.....+..+.||++++|.| +++|+|||||+.
T Consensus 27 ~~~F~P~~i~v~~Gd~V~~--~N~d~~~H~v~~~~~-------~~g~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~ 94 (105)
T 2ov0_A 27 KMKYETPELHVKVGDTVTW--INREAMPHNVHFVAG-------VLGEAALKGPMMKKEQAYSLTF---TEAGTYDYHCTP 94 (105)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTT-------TSSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred ecEEcCCEEEECCCCEEEE--EECCCCCEEEEEcCC-------CCCcccccccccCCCCEEEEEe---CCCEEEEEEeCC
Confidence 4455558999999999655 699888999999853 2555444445689999998887 689999999998
Q ss_pred hhhhhcceEEEEEe
Q 008366 130 SMLRATVHGAFIIR 143 (568)
Q Consensus 130 ~~~~~Gl~G~liV~ 143 (568)
|. ||.|.|+|+
T Consensus 95 H~---gM~G~i~V~ 105 (105)
T 2ov0_A 95 HP---FMRGKVVVE 105 (105)
T ss_dssp CT---TCEEEEEEC
T ss_pred CC---CCEEEEEEC
Confidence 65 999999984
No 77
>3cvb_A Plastocyanin; cupredoxin, SELF assembly, copper, electron transport, metal-binding, transport; 1.40A {Phormidium laminosum} PDB: 3cvc_A 3cvd_A 2w8c_A 2w88_A 2q5b_A 1baw_A 3bqv_A
Probab=99.07 E-value=1.2e-10 Score=97.46 Aligned_cols=86 Identities=17% Similarity=0.161 Sum_probs=66.2
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEe-
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRA- 522 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a- 522 (568)
+.+.++.|++|+|+ |.+. ..|++|+||..|... .+ .+ ......++..++||+...++|.+
T Consensus 19 ~~i~v~~Gd~V~~~--N~~~---~~H~v~~~~~~~~~~---~g-~~----------~~~~~~~~~~i~pG~~~~~~f~~~ 79 (105)
T 3cvb_A 19 ANVTVHPGDTVKWV--NNKL---PPHNILFDDKQVPGA---SK-EL----------ADKLSHSQLMFSPGESYEITFSSD 79 (105)
T ss_dssp SEEEECTTEEEEEE--ECSS---CCEEEEECTTSSGGG---CH-HH----------HHHHCEEEEECSTTCEEEEEECTT
T ss_pred CEEEEcCCCEEEEE--ECCC---CCCeEEEeCCCCCcc---cc-cc----------cccccccccccCCCCeEEEEEecC
Confidence 56789999999864 7543 789999999765331 00 00 00112678899999999999998
Q ss_pred cCceeEEEEeecccccccccEEEEEEec
Q 008366 523 NNPGVWFMHCHFDVHLPWGLATTFIVEN 550 (568)
Q Consensus 523 dnpG~w~~HCHil~H~d~GM~~~~~V~~ 550 (568)
+.||.|.|||| .|..+||++.|+|++
T Consensus 80 ~~~G~y~y~C~--~H~~~GM~G~i~V~~ 105 (105)
T 3cvb_A 80 FPAGTYTYYCA--PHRGAGMVGKITVEG 105 (105)
T ss_dssp SCSEEEEEECT--TTGGGTCEEEEEECC
T ss_pred CCCeeEEEEeC--CchhcCCEEEEEEcC
Confidence 78999999999 799999999999863
No 78
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.93 E-value=2.5e-09 Score=89.59 Aligned_cols=83 Identities=14% Similarity=0.154 Sum_probs=60.7
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCC----CcccccCCCCCeEEEEEEeCCCCCceeEecChhh
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPN----MITQCPIRPGNSYTYKFRIINQEGTLWWHAHISM 131 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~----~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~ 131 (568)
+.|++++||+|++ .|....++++|+|+..... .+|.. ......+.||++++|.|+++..+|+|||||+.|
T Consensus 20 ~~i~v~~Gd~V~~--~n~~~~~H~~~~~~~~~~~---~~g~~~~~~~~~~~~~~pG~~~~~~f~~~~~~G~y~y~C~~H- 93 (106)
T 2gim_A 20 AKLTIKPGDTVEF--LNNKVPPHNVVFDAALNPA---KSADLAKSLSHKQLLMSPGQSTSTTFPADAPAGEYTFYCEPH- 93 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCCCBEECSSSSTT---CCHHHHHHHCBCSCCCSTTCEEEEECCTTCCSEEEEEECTTT-
T ss_pred CEEEECCCCEEEE--EECCCCCceEEEeCCCCcc---cccccchhccccceeeCCCCEEEEEEecCCCCceEEEEeCCh-
Confidence 7999999999755 5887778999998764321 12210 011235899999999997657899999999932
Q ss_pred hhhcceEEEEEec
Q 008366 132 LRATVHGAFIIRP 144 (568)
Q Consensus 132 ~~~Gl~G~liV~~ 144 (568)
...||.|.|+|.+
T Consensus 94 ~~~GM~G~i~V~~ 106 (106)
T 2gim_A 94 RGAGMVGKITVAG 106 (106)
T ss_dssp GGGTCEEEEEECC
T ss_pred hhcCcEEEEEEcC
Confidence 2239999999963
No 79
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=98.91 E-value=3.9e-09 Score=93.06 Aligned_cols=87 Identities=10% Similarity=0.111 Sum_probs=64.8
Q ss_pred CeEEEecCCEEEEEEEeCCCC-CeeEEEcccccc--------C------CCCC-CCCCC--cccccCCCCCeEEEEEEeC
Q 008366 56 PTIRVQEGDTLIVHVSNESPY-NITIHWHGIFQI--------R------SIWA-DGPNM--ITQCPIRPGNSYTYKFRII 117 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~-~~~iH~HG~~~~--------~------~~~~-DG~~~--~~~~~i~PG~~~~y~f~~~ 117 (568)
+.|+|++||+|+++|+|.... +++++.++.... . ..+. ++.+. .....|.||+++++.|++
T Consensus 35 ~~i~v~~G~~V~~~~~N~~~~~~H~~~i~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~t~~l~pGet~~v~f~~- 113 (139)
T 2aan_A 35 TELTVSAGQTVTIRFKNNSAVQQHNWILVKGGEAEAANIANAGLSAGPAANYLPADKSNIIAESPLANGNETVEVTFTA- 113 (139)
T ss_dssp SEEEECTTCEEEEEEECCCSSCCBCCEEESSCHHHHHHHHHHHHHHCGGGTTCCSCCTTEEEECCCBCTTCEEEEEEEC-
T ss_pred CeEEECCCCEEEEEEEeCCCCCCeeEEEeccccccchhhhhhhhcccccccccCcccccccccccccCCCCEEEEEEEC-
Confidence 799999999999999999877 899999874310 0 0000 11010 011348999999999998
Q ss_pred CCCCceeEecChhhhhhcceEEEEEe
Q 008366 118 NQEGTLWWHAHISMLRATVHGAFIIR 143 (568)
Q Consensus 118 ~~~Gt~~YH~h~~~~~~Gl~G~liV~ 143 (568)
+.+|+|+||||..+...||.|.|+|.
T Consensus 114 ~~pG~y~f~C~~~~H~~GM~G~i~V~ 139 (139)
T 2aan_A 114 PAAGTYLYICTVPGHYPLMQGKLVVN 139 (139)
T ss_dssp CSSEEEEEECCSTTTTTTSEEEEEEC
T ss_pred CCCeEEEEEcCCCChHHcCEEEEEEC
Confidence 89999999999876555999999984
No 80
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.75 E-value=3.3e-08 Score=81.70 Aligned_cols=79 Identities=11% Similarity=0.154 Sum_probs=63.1
Q ss_pred CCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecCh
Q 008366 50 NGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI 129 (568)
Q Consensus 50 NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~ 129 (568)
|.++--..|++++||+|++.++|.....+++...+.... ..+.||++.++.|+. +++|+|.|+|..
T Consensus 22 ~~~F~P~~i~v~~G~tV~~~~~n~d~~~H~~~~~~~~~~-------------~~~~pg~~~~~~~t~-~~~G~Y~y~C~~ 87 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTLLLKNKGKSEHTFTIKKLGID-------------VVVESGKEKNITVKP-KSAGTYELICRY 87 (100)
T ss_dssp TTEEESSEEEECTTSCEEEEEEECSSSCEEEEEGGGTEE-------------EEECTTCEEEEEECC-CSCEEEEEECTT
T ss_pred CCEEeCCEEEECCCCEEEEEEEcCCCceEEEEEecCCcc-------------eeecCCcceeEEEec-ccCceEEEECcc
Confidence 445532689999999999999999877788777665321 247899999999997 999999999975
Q ss_pred hhhhhcceEEEEEe
Q 008366 130 SMLRATVHGAFIIR 143 (568)
Q Consensus 130 ~~~~~Gl~G~liV~ 143 (568)
|.. .||.|.|+|+
T Consensus 88 H~~-~gM~G~i~Ve 100 (100)
T 4hci_A 88 HLL-KGMEGKVIVK 100 (100)
T ss_dssp TGG-GTCEEEEEEC
T ss_pred ccC-CCCEEEEEEC
Confidence 422 3999999995
No 81
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=98.73 E-value=2.3e-08 Score=83.57 Aligned_cols=85 Identities=16% Similarity=0.171 Sum_probs=62.8
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEe-
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRA- 522 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~a- 522 (568)
..+.++.|++|+|+ |.+. ..|++|+|+..+.. ..| .+ . ....+|++.+.||+...+.|.+
T Consensus 20 ~~i~v~~Gd~V~~~--n~~~---~~H~~~~~~~~~~~---~~g-~~----~------~~~~~~~~~~~pG~~~~~~f~~~ 80 (106)
T 2gim_A 20 AKLTIKPGDTVEFL--NNKV---PPHNVVFDAALNPA---KSA-DL----A------KSLSHKQLLMSPGQSTSTTFPAD 80 (106)
T ss_dssp SEEEECTTCEEEEE--ECSS---SCCCBEECSSSSTT---CCH-HH----H------HHHCBCSCCCSTTCEEEEECCTT
T ss_pred CEEEECCCCEEEEE--ECCC---CCceEEEeCCCCcc---ccc-cc----c------hhccccceeeCCCCEEEEEEecC
Confidence 45689999999886 6543 78999999764310 000 00 0 0011467789999999998888
Q ss_pred cCceeEEEEeecccccccccEEEEEEe
Q 008366 523 NNPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 523 dnpG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
+.||.|.|||| .|.++||.+.|+|+
T Consensus 81 ~~~G~y~y~C~--~H~~~GM~G~i~V~ 105 (106)
T 2gim_A 81 APAGEYTFYCE--PHRGAGMVGKITVA 105 (106)
T ss_dssp CCSEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCCceEEEEeC--ChhhcCcEEEEEEc
Confidence 78999999999 89999999999986
No 82
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.70 E-value=6.4e-08 Score=85.26 Aligned_cols=88 Identities=14% Similarity=0.180 Sum_probs=64.2
Q ss_pred CeEEEecCCEEEEEEEe--CCCCCeeEEEcccc--c----------cC-CCCC---CCCC-CcccccCCCCCeEEEEEEe
Q 008366 56 PTIRVQEGDTLIVHVSN--ESPYNITIHWHGIF--Q----------IR-SIWA---DGPN-MITQCPIRPGNSYTYKFRI 116 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N--~l~~~~~iH~HG~~--~----------~~-~~~~---DG~~-~~~~~~i~PG~~~~y~f~~ 116 (568)
+.|++++||+|+++++| .....|+++.+... . .. ..+. |... .-....|.||++.++.|++
T Consensus 33 ~~i~v~~G~tV~~~~~N~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pG~~~~~~~~~ 112 (140)
T 1qhq_A 33 TSLSLPANTVVRLDFVNQNNLGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPPDTPNALAWTAMLNAGESGSVTFRT 112 (140)
T ss_dssp SEEEEETTCEEEEEEEECCSSCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCTTCTTEEEECCCBCTTEEEEEEEEC
T ss_pred CeEEECCCCEEEEEEECCCCCCCceeEEEeccCcchhhhhhhhhhhcccccccCccccccccccceeeCCCceeEEEEEe
Confidence 79999999999999999 66788888887321 0 00 0000 1000 0011358999999999998
Q ss_pred CCCCCceeEecChhhhhh-cceEEEEEec
Q 008366 117 INQEGTLWWHAHISMLRA-TVHGAFIIRP 144 (568)
Q Consensus 117 ~~~~Gt~~YH~h~~~~~~-Gl~G~liV~~ 144 (568)
+.+|+|+|||+..+... ||.|.|+|.|
T Consensus 113 -~~~G~y~f~C~~~~H~~~GM~g~i~V~p 140 (140)
T 1qhq_A 113 -PAPGTYLYICTFPGHYLAGMKGTLTVTP 140 (140)
T ss_dssp -CSSEEEEEECCSTTTTTTTCEEEEEEEC
T ss_pred -CCCeeEEEEeCCcCHhhcCCEEEEEEcC
Confidence 89999999999876665 9999999974
No 83
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.64 E-value=1.1e-07 Score=78.04 Aligned_cols=77 Identities=19% Similarity=0.296 Sum_probs=57.4
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCC----CcccccCCCCCeEEEEEEeCCCCCceeEecChhh
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPN----MITQCPIRPGNSYTYKFRIINQEGTLWWHAHISM 131 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~----~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~ 131 (568)
+.|++++||+|+ +.|....++++|+|+.... +|.. ......+.||+++++.| +++|+|+|||+.|.
T Consensus 18 ~~i~v~~G~~V~--~~n~~~~~H~~~~~~~~~p-----~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H~ 87 (98)
T 2plt_A 18 KTLTIKSGETVN--FVNNAGFPHNIVFDEDAIP-----SGVNADAISRDDYLNAPGETYSVKL---TAAGEYGYYCEPHQ 87 (98)
T ss_dssp SEEEECTTCEEE--EEECSSCCEEEEECGGGSC-----TTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECGGGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCC-----CccccccccccceecCCCCEEEEEe---CCCeEEEEEcCCcc
Confidence 689999999875 5788778999999986432 2211 01123589999999877 47999999999432
Q ss_pred hhhcceEEEEEe
Q 008366 132 LRATVHGAFIIR 143 (568)
Q Consensus 132 ~~~Gl~G~liV~ 143 (568)
..||.|.|+|.
T Consensus 88 -~~gM~G~i~V~ 98 (98)
T 2plt_A 88 -GAGMVGKIIVQ 98 (98)
T ss_dssp -GGTCEEEEEEC
T ss_pred -ccCCeEEEEEC
Confidence 23999999984
No 84
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=98.62 E-value=1.1e-07 Score=83.85 Aligned_cols=99 Identities=19% Similarity=0.177 Sum_probs=71.3
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCC--cEEEEE-e----C-CCCCCCCCCCCCCcCCCCCceeeEEeCCCcE
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGY--DFYVLA-Q----G-FGNYNASRDSKNFNLVNPQRRNTIAVPIGGW 515 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~--~F~Vv~-~----~-~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~ 515 (568)
..++++.|++|+|++.|.+. +...|.||++.. ++.-+. . + ...|-+.. -....+++|..|.+|..
T Consensus 33 ~~i~v~~G~tV~~~~~N~~~-~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~t~~l~pG~~ 105 (140)
T 1qhq_A 33 TSLSLPANTVVRLDFVNQNN-LGVQHNWVLVNGGDDVAAAVNTAAQNNADALFVPPP------DTPNALAWTAMLNAGES 105 (140)
T ss_dssp SEEEEETTCEEEEEEEECCS-SCCCBCCEEESSSHHHHHHHHHHHHTCGGGTTCCCT------TCTTEEEECCCBCTTEE
T ss_pred CeEEECCCCEEEEEEECCCC-CCCceeEEEeccCcchhhhhhhhhhhcccccccCcc------ccccccccceeeCCCce
Confidence 45689999999999999321 238999999843 121100 0 0 00010000 01134789999999999
Q ss_pred EEEEEEecCceeEEEEeecccccccccEEEEEEe
Q 008366 516 AVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 516 ~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
..+.|.++.||.|.|||++..|...||.+.|.|.
T Consensus 106 ~~~~~~~~~~G~y~f~C~~~~H~~~GM~g~i~V~ 139 (140)
T 1qhq_A 106 GSVTFRTPAPGTYLYICTFPGHYLAGMKGTLTVT 139 (140)
T ss_dssp EEEEEECCSSEEEEEECCSTTTTTTTCEEEEEEE
T ss_pred eEEEEEeCCCeeEEEEeCCcCHhhcCCEEEEEEc
Confidence 9999999999999999999999999999999986
No 85
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.61 E-value=1e-07 Score=82.95 Aligned_cols=79 Identities=14% Similarity=0.244 Sum_probs=57.4
Q ss_pred CCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecCh
Q 008366 50 NGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI 129 (568)
Q Consensus 50 NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~ 129 (568)
+..+--+.|++++||+|++ .|....+|++++.... +|........+.||++++|.| +++|+|+|+|-.
T Consensus 54 ~~~F~P~~i~V~~GdtV~~--~N~d~~~H~v~~~~~~-------~g~~~~~s~~l~pG~t~~~tF---~~~G~y~y~C~~ 121 (132)
T 3c75_A 54 KMKYLTPEVTIKAGETVYW--VNGEVMPHNVAFKKGI-------VGEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTP 121 (132)
T ss_dssp TTEESSSEEEECTTCEEEE--EECSSSCBCCEECTTT-------SSSSCEECCCBCTTEEEEEEE---CSCEEEEEECSS
T ss_pred eeEEeCCEEEECCCCEEEE--EECCCCceEEEEeCCC-------CCcccccccccCCCCEEEEEc---CCCEEEEEEeCC
Confidence 4454337999999999765 5887778888775422 122222223588999999888 579999999987
Q ss_pred hhhhhcceEEEEEe
Q 008366 130 SMLRATVHGAFIIR 143 (568)
Q Consensus 130 ~~~~~Gl~G~liV~ 143 (568)
|. ||.|.|+|+
T Consensus 122 H~---gM~G~I~V~ 132 (132)
T 3c75_A 122 HP---FMRGKVIVE 132 (132)
T ss_dssp CT---TCEEEEEEC
T ss_pred Cc---CCEEEEEEC
Confidence 54 999999984
No 86
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=98.56 E-value=1.2e-07 Score=77.93 Aligned_cols=81 Identities=20% Similarity=0.214 Sum_probs=60.6
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..+.++.|++|+| .|.+. ..|.+|+|+..+ ...++. ...++|+..+.+|+...+.| +
T Consensus 18 ~~i~v~~G~~V~~--~n~~~---~~H~~~~~~~~~------p~~~~~----------~~~~~~~~~~~pG~~~~~tf--~ 74 (98)
T 2plt_A 18 KTLTIKSGETVNF--VNNAG---FPHNIVFDEDAI------PSGVNA----------DAISRDDYLNAPGETYSVKL--T 74 (98)
T ss_dssp SEEEECTTCEEEE--EECSS---CCEEEEECGGGS------CTTCCH----------HHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECCC---CceEEEEeCCCC------CCcccc----------ccccccceecCCCCEEEEEe--C
Confidence 4578999999988 56543 789999987521 000100 01247889999999888765 6
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
.||.|.|||| .|.++||.+.|.|+
T Consensus 75 ~~G~y~y~C~--~H~~~gM~G~i~V~ 98 (98)
T 2plt_A 75 AAGEYGYYCE--PHQGAGMVGKIIVQ 98 (98)
T ss_dssp SCEEEEEECG--GGGGGTCEEEEEEC
T ss_pred CCeEEEEEcC--CccccCCeEEEEEC
Confidence 8999999999 79999999999884
No 87
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.56 E-value=6.2e-08 Score=79.68 Aligned_cols=79 Identities=22% Similarity=0.315 Sum_probs=59.6
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCc-eeeEEeCCCcEEEEEEEe
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQR-RNTIAVPIGGWAVIRFRA 522 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~-rDTv~vp~~g~~~irf~a 522 (568)
..+.++.|++|.|+ |.+. ..|.+|+|+..+- +. ..+.+ +|+..+.||+...+.|
T Consensus 19 ~~i~v~~G~~V~~~--n~~~---~~H~~~~~~~~~p--g~----------------~~~~~~~~~~~~~pG~~~~~tf-- 73 (98)
T 1pcs_A 19 STVTIKAGEEVKWV--NNKL---SPHNIVFDADGVP--AD----------------TAAKLSHKGLLFAAGESFTSTF-- 73 (98)
T ss_dssp SEEEECTTCEEEEE--ECSS---CCEEEEECCSSSC--HH----------------HHHHHCEEEEECSTTCEEEEEC--
T ss_pred CEEEECCCCEEEEE--ECCC---CCcEEEEeCCCCC--cc----------------ccccccccccccCCCCEEEEEc--
Confidence 45689999999987 5443 7899999864211 00 00112 6788999999888766
Q ss_pred cCceeEEEEeecccccccccEEEEEEe
Q 008366 523 NNPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 523 dnpG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
+.||.|.|||| .|.++||.+.|.|+
T Consensus 74 ~~~G~y~~~C~--~H~~~gM~G~i~V~ 98 (98)
T 1pcs_A 74 TEPGTYTYYCE--PHRGAGMVGKVVVE 98 (98)
T ss_dssp CSCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCCeEEEEEcC--CccccCCeEEEEEC
Confidence 89999999999 79999999999984
No 88
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.55 E-value=2.4e-07 Score=74.89 Aligned_cols=73 Identities=23% Similarity=0.360 Sum_probs=57.7
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..+.++.|++|.|+ |.+. ..|.+|+|+.. +...++..+.||+...+.| +
T Consensus 19 ~~i~v~~Gd~V~~~--n~~~---~~H~v~~~~~~------------------------~~~~~~~~~~~g~~~~~~f--~ 67 (91)
T 1bxv_A 19 STIEIQAGDTVQWV--NNKL---APHNVVVEGQP------------------------ELSHKDLAFSPGETFEATF--S 67 (91)
T ss_dssp SEEEECTTCEEEEE--ECSS---CCEEEEETTCG------------------------GGCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECCC---CCcEEEEeCCC------------------------ccCcccceeCCCCEEEEEe--C
Confidence 45689999999886 5443 78999988720 0125677899998777765 8
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
.||.|.|||| .|.+.||.+.|.|+
T Consensus 68 ~~G~y~~~C~--~H~~~gM~g~i~V~ 91 (91)
T 1bxv_A 68 EPGTYTYYCE--PHRGAGMVGKIVVQ 91 (91)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred CCEEEEEEeC--CCccCCCEEEEEEC
Confidence 9999999999 89999999999884
No 89
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=98.52 E-value=2.6e-07 Score=75.94 Aligned_cols=80 Identities=16% Similarity=0.172 Sum_probs=55.9
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecChhhhhhc
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT 135 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~G 135 (568)
+.|++++||+|++ .|....+++++.++...+... .++.. .....+.||+++++.| +.+|+|+|||+.|. ..|
T Consensus 19 ~~i~v~~G~~V~~--~n~~~~~H~~~~~~~~~pg~~-~~~~~-~~~~~~~pG~~~~~tf---~~~G~y~~~C~~H~-~~g 90 (98)
T 1pcs_A 19 STVTIKAGEEVKW--VNNKLSPHNIVFDADGVPADT-AAKLS-HKGLLFAAGESFTSTF---TEPGTYTYYCEPHR-GAG 90 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECCSSSCHHH-HHHHC-EEEEECSTTCEEEEEC---CSCEEEEEECGGGT-TTT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCCCccc-ccccc-ccccccCCCCEEEEEc---CCCeEEEEEcCCcc-ccC
Confidence 6899999998765 587667899998875321000 00000 1123589999999877 57999999999432 239
Q ss_pred ceEEEEEe
Q 008366 136 VHGAFIIR 143 (568)
Q Consensus 136 l~G~liV~ 143 (568)
|.|.|+|+
T Consensus 91 M~G~i~V~ 98 (98)
T 1pcs_A 91 MVGKVVVE 98 (98)
T ss_dssp CEEEEEEC
T ss_pred CeEEEEEC
Confidence 99999984
No 90
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=98.51 E-value=3.3e-07 Score=74.06 Aligned_cols=73 Identities=21% Similarity=0.296 Sum_probs=54.6
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecChhhhhhc
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT 135 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~G 135 (568)
+.|++++||+|++ .|....+++++.++... + + .....+.||+++++.| +++|+|+|||+.+.. .|
T Consensus 19 ~~i~v~~Gd~V~~--~n~~~~~H~v~~~~~~~----~--~---~~~~~~~~g~~~~~~f---~~~G~y~~~C~~H~~-~g 83 (91)
T 1bxv_A 19 STIEIQAGDTVQW--VNNKLAPHNVVVEGQPE----L--S---HKDLAFSPGETFEATF---SEPGTYTYYCEPHRG-AG 83 (91)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEETTCGG----G--C---EEEEECSTTCEEEEEC---CSCEEEEEECTTTGG-GT
T ss_pred CEEEECCCCEEEE--EECCCCCcEEEEeCCCc----c--C---cccceeCCCCEEEEEe---CCCEEEEEEeCCCcc-CC
Confidence 6999999999765 58766789999887310 0 0 1123689999988876 689999999994422 39
Q ss_pred ceEEEEEe
Q 008366 136 VHGAFIIR 143 (568)
Q Consensus 136 l~G~liV~ 143 (568)
|.|.|+|.
T Consensus 84 M~g~i~V~ 91 (91)
T 1bxv_A 84 MVGKIVVQ 91 (91)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 91
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.47 E-value=5.1e-07 Score=73.96 Aligned_cols=77 Identities=16% Similarity=0.224 Sum_probs=55.5
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCC--cccccCCCCCeEEEEEEeCCCCCceeEecChhhhh
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNM--ITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLR 133 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~--~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~ 133 (568)
+.|++++||+| ++.|....+++++.++.... +|... .....+.||+++++.| ..+|+|+|||+.|. .
T Consensus 19 ~~i~v~~G~~V--~~~n~~~~~H~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~-~ 87 (97)
T 1b3i_A 19 KALSISAGDTV--EFVMNKVGPHNVIFDKVPAG-----ESAPALSNTKLAIAPGSFYSVTL---GTPGTYSFYCTPHR-G 87 (97)
T ss_dssp SEEEECTTCEE--EEEECSSCCCCBEEEECCTT-----SCHHHHCBCCCCCSCSCCEEEEC---CSCSEEEEECSSTT-T
T ss_pred CEEEECCCCEE--EEEECCCCCeEEEEeCCCCc-----cccccccccceecCCCCEEEEEe---CCCeEEEEEccChh-h
Confidence 68999999986 55687667888888765431 22100 0123589999998877 68999999999432 2
Q ss_pred hcceEEEEEe
Q 008366 134 ATVHGAFIIR 143 (568)
Q Consensus 134 ~Gl~G~liV~ 143 (568)
.||.|.|+|.
T Consensus 88 ~gM~G~i~V~ 97 (97)
T 1b3i_A 88 AGMVGTITVE 97 (97)
T ss_dssp TTCEEEEEEC
T ss_pred cCCEEEEEEC
Confidence 3999999984
No 92
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.44 E-value=7.3e-07 Score=73.33 Aligned_cols=77 Identities=13% Similarity=0.227 Sum_probs=55.8
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCC------cccccCCCCCeEEEEEEeCCCCCceeEecCh
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNM------ITQCPIRPGNSYTYKFRIINQEGTLWWHAHI 129 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~------~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~ 129 (568)
+.|++++||+| ++.|....+++++.++.... +|... .....+.||+++++.| +.+|+|+|||+.
T Consensus 17 ~~i~v~~G~tV--~~~n~~~~~H~~~~~~~~~p-----~g~~~~~~~~~~~~~~~~~G~~~~~~f---~~~G~y~~~C~~ 86 (99)
T 1byp_A 17 SDLSIASGEKI--TFKNNAGFPHNDLFDKKEVP-----AGVDVTKISMPEEDLLNAPGEEYSVTL---TEKGTYKFYCAP 86 (99)
T ss_dssp SEEEECTTEEE--EEEECSSCCBCCEECTTSSC-----TTCCHHHHSCCTTCCBCSTTCEEEEEE---CSCEEEEEECGG
T ss_pred CEEEECCCCEE--EEEECCCCcceEEEeCCCCc-----cccccccccccccceeeCCCCEEEEEe---CCCcEEEEEcCC
Confidence 68999999986 45788777899998875321 22210 1113589999988877 489999999994
Q ss_pred hhhhhcceEEEEEe
Q 008366 130 SMLRATVHGAFIIR 143 (568)
Q Consensus 130 ~~~~~Gl~G~liV~ 143 (568)
| ...||.|.|+|.
T Consensus 87 H-~~~gM~G~i~V~ 99 (99)
T 1byp_A 87 H-AGAGMVGKVTVN 99 (99)
T ss_dssp G-TTTTCEEEEEEC
T ss_pred c-cccCCEEEEEEC
Confidence 3 223999999984
No 93
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.44 E-value=7.3e-07 Score=73.34 Aligned_cols=77 Identities=10% Similarity=0.192 Sum_probs=55.3
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCC----C--cccccCCCCCeEEEEEEeCCCCCceeEecCh
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPN----M--ITQCPIRPGNSYTYKFRIINQEGTLWWHAHI 129 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~----~--~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~ 129 (568)
+.|++++||+|+ +.|....+++++.++.... +|.. + .....+.||+++++.| +.+|+|+|+|+.
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~v~~~~~~~p-----~~~~~~~~~~~~~~~~~~~G~~~~~tf---~~~G~y~~~C~~ 86 (99)
T 1plc_A 17 SEFSISPGEKIV--FKNNAGFPHNIVFDEDSIP-----SGVDASKISMSEEDLLNAKGETFEVAL---SNKGEYSFYCSP 86 (99)
T ss_dssp SEEEECTTCEEE--EEECSSCCBCCEECTTSSC-----TTCCHHHHCCCTTCCBCSTTCEEEEEC---CSCEEEEEECGG
T ss_pred CEEEECCCCEEE--EEECCCCceEEEEeCCCCc-----ccccccccccccCccccCCCCEEEEEE---CCCceEEEEcCC
Confidence 699999999865 5788777888888764321 2211 0 0113589999988877 489999999994
Q ss_pred hhhhhcceEEEEEe
Q 008366 130 SMLRATVHGAFIIR 143 (568)
Q Consensus 130 ~~~~~Gl~G~liV~ 143 (568)
|. ..||.|.|+|.
T Consensus 87 H~-~~gM~G~i~V~ 99 (99)
T 1plc_A 87 HQ-GAGMVGKVTVN 99 (99)
T ss_dssp GT-TTTCEEEEEEC
T ss_pred Cc-ccCCEEEEEEC
Confidence 32 23999999984
No 94
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.42 E-value=6.3e-07 Score=74.13 Aligned_cols=82 Identities=12% Similarity=0.088 Sum_probs=54.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCC--CCCCCCCCc--ccccCCCCCeEEEEEEeCCCCCceeEecChhh
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRS--IWADGPNMI--TQCPIRPGNSYTYKFRIINQEGTLWWHAHISM 131 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~--~~~DG~~~~--~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~ 131 (568)
+.|++++||+|+ +.|....+++++++.-..... ..++..++. ....+.||+++++.| ..+|+|+|||+.|
T Consensus 17 ~~i~v~~G~tV~--~~n~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~tf---~~~G~y~y~C~~H- 90 (102)
T 1kdj_A 17 DSITVSAGEAVE--FTLVGETGHNIVFDIPAGAPGTVASELKAASMDENDLLSEDEPSFKAKV---STPGTYTFYCTPH- 90 (102)
T ss_dssp SEEEECTTCCEE--EEECSSSCBCCEECCCTTCCHHHHHHHHHTSCCTTCCBBTTBCEEEECC---CSCEEEEEECSTT-
T ss_pred CEEEECCCCEEE--EEECCCCCeEEEEeCcccccccccchhhcccccccceecCCCCEEEEEe---CCCeEEEEEeCCC-
Confidence 789999999976 558876788888763110000 000000111 123589999988877 6899999999933
Q ss_pred hhhcceEEEEEe
Q 008366 132 LRATVHGAFIIR 143 (568)
Q Consensus 132 ~~~Gl~G~liV~ 143 (568)
...||.|.|+|+
T Consensus 91 ~~~gM~G~i~V~ 102 (102)
T 1kdj_A 91 KSANMKGTLTVK 102 (102)
T ss_dssp GGGTCEEEEEEC
T ss_pred cccCCeEEEEEC
Confidence 223999999984
No 95
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=98.41 E-value=4.9e-07 Score=74.06 Aligned_cols=79 Identities=20% Similarity=0.327 Sum_probs=58.7
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..+.++.|++|.|+ |.+. ..|.+++++..+ ..+ .. ...+++..+.+|+...+.| +
T Consensus 19 ~~i~v~~G~~V~~~--n~~~---~~H~~~~~~~~~-----~~~-------~~------~~~~~~~~~~~g~~~~~tf--~ 73 (97)
T 1b3i_A 19 KALSISAGDTVEFV--MNKV---GPHNVIFDKVPA-----GES-------AP------ALSNTKLAIAPGSFYSVTL--G 73 (97)
T ss_dssp SEEEECTTCEEEEE--ECSS---CCCCBEEEECCT-----TSC-------HH------HHCBCCCCCSCSCCEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECCC---CCeEEEEeCCCC-----ccc-------cc------cccccceecCCCCEEEEEe--C
Confidence 45689999999886 5443 789999886543 000 00 0114667788888877765 8
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
.||.|.|||+ .|.++||.+.|.|+
T Consensus 74 ~~G~y~y~C~--~H~~~gM~G~i~V~ 97 (97)
T 1b3i_A 74 TPGTYSFYCT--PHRGAGMVGTITVE 97 (97)
T ss_dssp SCSEEEEECS--STTTTTCEEEEEEC
T ss_pred CCeEEEEEcc--ChhhcCCEEEEEEC
Confidence 9999999999 99999999999884
No 96
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=98.40 E-value=6.1e-07 Score=77.03 Aligned_cols=76 Identities=14% Similarity=0.192 Sum_probs=53.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecChhhhhhc
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT 135 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~G 135 (568)
+.|++++||+|++.++|. +|++..+.... -||.. ...+.||++++|.| +.+|+|||||..|. ..|
T Consensus 23 ~~i~V~~GDtVtf~n~~~---~H~v~~~~~~~-----P~g~~---~f~s~pGet~s~TF---~~pG~y~y~C~~H~-~~G 87 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKDK---GHNSALMKGGA-----PEGAE---TWKGKINEEITVTL---SKPGVYMYQCAPHV-GMG 87 (127)
T ss_dssp SEEEECTTCEEEEECSSS---SCCCEECTTCS-----CTTCC---CCBCCTTCCCEEEC---CSCEEEEEECTTTG-GGT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEccCcC-----CCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCCC-cCC
Confidence 699999999977665553 55555432211 13321 13467999988888 68999999998542 249
Q ss_pred ceEEEEEecCC
Q 008366 136 VHGAFIIRPKS 146 (568)
Q Consensus 136 l~G~liV~~~~ 146 (568)
|.|.|+|.++.
T Consensus 88 M~G~I~V~~~~ 98 (127)
T 3tu6_A 88 MIGAIVVGEPA 98 (127)
T ss_dssp CEEEEEESSCT
T ss_pred cEEEEEECcCC
Confidence 99999998754
No 97
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=98.39 E-value=1.5e-06 Score=73.20 Aligned_cols=75 Identities=19% Similarity=0.299 Sum_probs=59.6
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..+.++.|+.|+|.+.|.+. ..|.|++.... -+..++||....+.|.++
T Consensus 38 ~~i~v~~G~~V~~~~~n~d~---~~H~~~i~~~~----------------------------~~~~i~pG~~~~~~f~~~ 86 (112)
T 1iby_A 38 ETLVVKKGDAVKVVVENKSP---ISEGFSIDAFG----------------------------VQEVIKAGETKTISFTAD 86 (112)
T ss_dssp CEEEEETTCEEEEEEEECSS---SCEEEEEGGGT----------------------------EEEEECTTCEEEEEEECC
T ss_pred CEEEEeCCCEEEEEEEECCC---CeEEEEEcCCC----------------------------ceeEeCCCCEEEEEEECC
Confidence 56789999999999999753 45555444210 145789999999999999
Q ss_pred CceeEEEEeecccccccccEEEEEEec
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVEN 550 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~~ 550 (568)
.||.|.||||...|... |.+.++|++
T Consensus 87 ~~G~y~~~C~~~~~~~~-M~g~i~V~~ 112 (112)
T 1iby_A 87 KAGAFTIWCQLHPKNIH-LPGTLNVVE 112 (112)
T ss_dssp SCEEEEEBCSSSCTTTB-CCEEEEEEC
T ss_pred CCEEEEEECCCCCchHH-CEEEEEEeC
Confidence 99999999999888654 999998863
No 98
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=98.38 E-value=1.3e-06 Score=71.89 Aligned_cols=73 Identities=21% Similarity=0.391 Sum_probs=59.3
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..+.++.|++|.|++.|.+. ..|.|.+.+..+ ...+.||....+.|.++
T Consensus 28 ~~i~v~~G~tV~~~~~n~d~---~~H~~~~~~~~~----------------------------~~~~~pg~~~~~~~t~~ 76 (100)
T 4hci_A 28 NVITIPINESTTLLLKNKGK---SEHTFTIKKLGI----------------------------DVVVESGKEKNITVKPK 76 (100)
T ss_dssp SEEEECTTSCEEEEEEECSS---SCEEEEEGGGTE----------------------------EEEECTTCEEEEEECCC
T ss_pred CEEEECCCCEEEEEEEcCCC---ceEEEEEecCCc----------------------------ceeecCCcceeEEEecc
Confidence 45789999999999999754 667766544322 23567888999999999
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
.||.|.|+|. .|...||.+.|+|+
T Consensus 77 ~~G~Y~y~C~--~H~~~gM~G~i~Ve 100 (100)
T 4hci_A 77 SAGTYELICR--YHLLKGMEGKVIVK 100 (100)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEEC
T ss_pred cCceEEEECc--cccCCCCEEEEEEC
Confidence 9999999996 69999999999985
No 99
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=98.37 E-value=1.1e-06 Score=75.14 Aligned_cols=75 Identities=13% Similarity=0.153 Sum_probs=53.0
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecChhhhhhc
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT 135 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~G 135 (568)
..|+|++||+|++.++|. +|++..+.. .+-+|.. ...+.||++++|.| +.+|+|||+|..|.. .|
T Consensus 21 ~~i~V~~GdtV~f~~~~~---~H~v~~~~~-----~~P~g~~---~f~~~pg~t~s~TF---~~pG~y~y~C~~H~~-~G 85 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTDK---SHNVEAIKE-----ILPEGVE---SFKSKINESYTLTV---TEPGLYGVKCTPHFG-MG 85 (123)
T ss_dssp SEEEECTTEEEEEEESST---TCCCEECTT-----SSCTTCC---CCBCCTTCCEEEEE---CSCEEEEEECGGGTT-TT
T ss_pred CEEEECCCCEEEEEECCC---CceEEEcCC-----cCCCCcc---ceecCCCCEEEEEe---CCCeEEEEEeCCCCc-CC
Confidence 699999999988777762 455554421 1114431 23467999988888 679999999995432 39
Q ss_pred ceEEEEEecC
Q 008366 136 VHGAFIIRPK 145 (568)
Q Consensus 136 l~G~liV~~~ 145 (568)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 3erx_A 86 MVGLVQVGDA 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred cEEEEEECCC
Confidence 9999999863
No 100
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=98.36 E-value=2.2e-06 Score=73.75 Aligned_cols=89 Identities=10% Similarity=0.104 Sum_probs=59.8
Q ss_pred CeEEEecC-CEEEEEEEeCCCCC-----eeEEE--cccccc----------CCCC---CCCCCCcccccCCCCCeEEEEE
Q 008366 56 PTIRVQEG-DTLIVHVSNESPYN-----ITIHW--HGIFQI----------RSIW---ADGPNMITQCPIRPGNSYTYKF 114 (568)
Q Consensus 56 P~i~v~~G-d~v~i~l~N~l~~~-----~~iH~--HG~~~~----------~~~~---~DG~~~~~~~~i~PG~~~~y~f 114 (568)
..|.|++| |+|+|+|+|....+ |++-+ +|.... ...+ .|..-......|.||++.++.|
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIGGGEKTSVKF 97 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBCTTCEEEEEE
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhccccccccccccccceeeeeEECCCCEEEEEE
Confidence 58999999 99999999996543 55433 331100 0000 0110000113589999999999
Q ss_pred EeC--CCCCceeEecChhhhhhcceEEEEEec
Q 008366 115 RII--NQEGTLWWHAHISMLRATVHGAFIIRP 144 (568)
Q Consensus 115 ~~~--~~~Gt~~YH~h~~~~~~Gl~G~liV~~ 144 (568)
+++ .++|+|||.|-..+...||.|.|+|.+
T Consensus 98 ~~~~~~~~G~Y~f~C~~pgH~~~M~G~i~V~~ 129 (129)
T 1cuo_A 98 KVSALSKDEAYTYFCSYPGHFSMMRGTLKLEE 129 (129)
T ss_dssp EGGGCCTTSCEEEECCSTTCTTTSEEEEEEEC
T ss_pred eccccCCCceEEEEeCCCCchHcCEEEEEEeC
Confidence 983 289999999987666668999999963
No 101
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=98.34 E-value=7.3e-07 Score=73.32 Aligned_cols=83 Identities=12% Similarity=0.131 Sum_probs=59.2
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..+.++.|++|.| .|.+. ..|.+|+++..|- . .++... . ...+|++.+.+|....+.| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~~---~~H~~~~~~~~~p---~---g~~~~~--~------~~~~~~~~~~~G~~~~~~f--~ 75 (99)
T 1byp_A 17 SDLSIASGEKITF--KNNAG---FPHNDLFDKKEVP---A---GVDVTK--I------SMPEEDLLNAPGEEYSVTL--T 75 (99)
T ss_dssp SEEEECTTEEEEE--EECSS---CCBCCEECTTSSC---T---TCCHHH--H------SCCTTCCBCSTTCEEEEEE--C
T ss_pred CEEEECCCCEEEE--EECCC---CcceEEEeCCCCc---c---cccccc--c------cccccceeeCCCCEEEEEe--C
Confidence 4568899999887 56543 7899999975430 0 011000 0 1125667888998877765 6
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
.||.|.|||+ .|.++||.+.|.|+
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1byp_A 76 EKGTYKFYCA--PHAGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCcEEEEEcC--CccccCCEEEEEEC
Confidence 9999999999 89999999999884
No 102
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=98.32 E-value=2.3e-06 Score=72.94 Aligned_cols=75 Identities=9% Similarity=-0.002 Sum_probs=53.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecChhhhhhc
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT 135 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~G 135 (568)
..|++++||+|+ ++|.. .+|++..+.... -+|.. ...+.||++++|.| +.+|+|+|||..|.. .|
T Consensus 22 ~~i~V~~GDTV~--f~n~~-~~Hnv~~~~~~~-----p~g~~---~~~~~pg~t~s~TF---~~~G~y~Y~C~~H~~-~G 86 (124)
T 3ef4_A 22 GFVKVEAGDTVK--FVPTD-KSHNAESVREVW-----PEGVA---PVKGGFSKEVVFNA---EKEGLYVLKCAPHYG-MG 86 (124)
T ss_dssp SEEEECTTCEEE--EECSS-SSCCCEECTTTS-----CTTSC---CCBCCTTCCEEEEC---CSSEEEEEECTTTGG-GT
T ss_pred CEEEECCCCEEE--EEECC-CCccEEEeCCcC-----CCCcc---ccccCCCCEEEEEe---CCCeEEEEEcCCCCc-CC
Confidence 699999999965 55553 577777653211 13321 13467999988888 679999999974422 39
Q ss_pred ceEEEEEecC
Q 008366 136 VHGAFIIRPK 145 (568)
Q Consensus 136 l~G~liV~~~ 145 (568)
|.|.|+|.++
T Consensus 87 M~G~I~V~~p 96 (124)
T 3ef4_A 87 MVVLVQVGKP 96 (124)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEECCC
Confidence 9999999864
No 103
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=98.28 E-value=3.8e-06 Score=75.31 Aligned_cols=88 Identities=9% Similarity=0.103 Sum_probs=59.9
Q ss_pred CeEEE-ecCCEEEEEEEeCCCCC-----eeEEE--ccccc---------cCCCC---CCCCCCcccccCCCCCeEEEEEE
Q 008366 56 PTIRV-QEGDTLIVHVSNESPYN-----ITIHW--HGIFQ---------IRSIW---ADGPNMITQCPIRPGNSYTYKFR 115 (568)
Q Consensus 56 P~i~v-~~Gd~v~i~l~N~l~~~-----~~iH~--HG~~~---------~~~~~---~DG~~~~~~~~i~PG~~~~y~f~ 115 (568)
..|.| +.||+|+|+|+|....+ |++-+ +|... ....+ .|..-......|.||++.++.|+
T Consensus 58 ~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~pGet~svtf~ 137 (167)
T 3ay2_A 58 KDIQVSKACKEFTITLKHTGTQPKASMGHNLVIAKAEDMDGVFKDGVGAADTDYVKPDDARVVAHTKLIGGGEESSLTLD 137 (167)
T ss_dssp SEEEEETTCSSEEEEEEECSCSCHHHHCBCCEEEEGGGHHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCTTCEEEEEEC
T ss_pred ceEEEecCCCEEEEEEEECCCCccccccceEEeccCcchhhhHHHhhhccccccccccccchhccceeeCCCCEEEEEEe
Confidence 48999 99999999999997553 54433 33110 00000 01100001135899999999998
Q ss_pred eCC--CCCceeEecChhhhhhcceEEEEEec
Q 008366 116 IIN--QEGTLWWHAHISMLRATVHGAFIIRP 144 (568)
Q Consensus 116 ~~~--~~Gt~~YH~h~~~~~~Gl~G~liV~~ 144 (568)
+ . ++|+|||+|-..++..||.|.|+|.+
T Consensus 138 ~-~~lkpG~Y~f~Ct~PgH~~gM~G~i~V~~ 167 (167)
T 3ay2_A 138 P-AKLADGDYKFACTFPGHGALMNGKVTLVD 167 (167)
T ss_dssp G-GGGTTSCEEEECCSTTGGGTSEEEEEEEC
T ss_pred c-CCCCCcEEEEEcCCCCchhcCEEEEEEeC
Confidence 7 5 89999999988766669999999963
No 104
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=98.18 E-value=6.5e-06 Score=67.45 Aligned_cols=77 Identities=13% Similarity=0.116 Sum_probs=54.4
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCC----cccccCCCCCeEEEEEEeCCCCCceeEecChhh
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNM----ITQCPIRPGNSYTYKFRIINQEGTLWWHAHISM 131 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~----~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~ 131 (568)
+.|++++||+|++ .|....+|++....-..+ +|... .....+.||+++++.| +.+|+|+|+|..|.
T Consensus 18 ~~i~v~~GdtV~~--~n~~~~~H~v~~~~~~~p-----~g~~~~~~~~~~~~~~~g~~~~~tf---~~~G~y~y~C~~H~ 87 (98)
T 1iuz_A 18 SKISVAAGEAIEF--VNNAGFPHNIVFDEDAVP-----AGVDADAISYDDYLNSKGETVVRKL---STPGVYGVYCEPHA 87 (98)
T ss_dssp SEEEECTTCEEEE--EECSSCCEEEEECTTSSC-----TTCCHHHHCEEEEECSTTCEEEEEC---CSCEEEEEECTTTG
T ss_pred CEEEECCCCEEEE--EECCCCCEEEEEeCCCCc-----cccccccccccccccCCCCEEEEEc---CCCEEEEEEchhhc
Confidence 6999999999655 588667888877642111 22210 0113589999988877 68999999998743
Q ss_pred hhhcceEEEEEe
Q 008366 132 LRATVHGAFIIR 143 (568)
Q Consensus 132 ~~~Gl~G~liV~ 143 (568)
. .||.|.|+|+
T Consensus 88 ~-~gM~G~I~V~ 98 (98)
T 1iuz_A 88 G-AGMKMTITVQ 98 (98)
T ss_dssp G-GTCEEEEEEC
T ss_pred c-CCCEEEEEEC
Confidence 2 3999999984
No 105
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=98.17 E-value=2.8e-06 Score=70.14 Aligned_cols=85 Identities=12% Similarity=0.080 Sum_probs=57.9
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCc-eeeEEeCCCcEEEEEEEe
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQR-RNTIAVPIGGWAVIRFRA 522 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~-rDTv~vp~~g~~~irf~a 522 (568)
..+.++.|++|+|+ |.+. ..|.++++.- ..++.... ... ..+.+ .+++.+.||+...+.|
T Consensus 17 ~~i~v~~G~tV~~~--n~~~---~~H~~~~~~~---------~~~~~~~~--~~~-~~~~~~~~~~~~~pG~~~~~tf-- 77 (102)
T 1kdj_A 17 DSITVSAGEAVEFT--LVGE---TGHNIVFDIP---------AGAPGTVA--SEL-KAASMDENDLLSEDEPSFKAKV-- 77 (102)
T ss_dssp SEEEECTTCCEEEE--ECSS---SCBCCEECCC---------TTCCHHHH--HHH-HHTSCCTTCCBBTTBCEEEECC--
T ss_pred CEEEECCCCEEEEE--ECCC---CCeEEEEeCc---------cccccccc--chh-hcccccccceecCCCCEEEEEe--
Confidence 56789999999986 6543 6899998721 11100000 000 00122 4667788988877766
Q ss_pred cCceeEEEEeecccccccccEEEEEEe
Q 008366 523 NNPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 523 dnpG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
+.||.|.|||+ .|.++||.+.|+|+
T Consensus 78 ~~~G~y~y~C~--~H~~~gM~G~i~V~ 102 (102)
T 1kdj_A 78 STPGTYTFYCT--PHKSANMKGTLTVK 102 (102)
T ss_dssp CSCEEEEEECS--TTGGGTCEEEEEEC
T ss_pred CCCeEEEEEeC--CCcccCCeEEEEEC
Confidence 89999999999 99999999999984
No 106
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=98.15 E-value=9.3e-06 Score=67.56 Aligned_cols=73 Identities=15% Similarity=0.298 Sum_probs=52.6
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecChhhhhhc
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT 135 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~G 135 (568)
+.|++++||+|++ .|....+|++....... |........+.||+++++.| +.+|+|+|+|-.|. |
T Consensus 34 ~~i~V~~G~tV~~--~N~d~~~H~v~~~~~~~-------~~~~~~s~~l~~g~~~~~tf---~~~G~y~~~C~~H~---~ 98 (106)
T 1id2_A 34 PEVTIKAGETVYW--VNGEVMPHNVAFKKGIV-------GEDAFRGEMMTKDQAYAITF---NEAGSYDYFCTPHP---F 98 (106)
T ss_dssp SEEEECTTCEEEE--EECSSSCBCCEECTTTS-------SSSCEECCCBCTTEEEEEEE---CSCEEEEEECSSCT---T
T ss_pred CEEEECCCCEEEE--EECCCCcEEEEEeCCCC-------CcccccccccCCCCEEEEEe---CCCEEEEEEeCCCC---C
Confidence 6999999999765 58866667766654221 11111112488999988887 68899999998754 9
Q ss_pred ceEEEEEe
Q 008366 136 VHGAFIIR 143 (568)
Q Consensus 136 l~G~liV~ 143 (568)
|.|.|+|+
T Consensus 99 M~G~I~V~ 106 (106)
T 1id2_A 99 MRGKVIVE 106 (106)
T ss_dssp CEEEEEEC
T ss_pred CEEEEEEC
Confidence 99999984
No 107
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=98.14 E-value=1e-05 Score=69.54 Aligned_cols=87 Identities=14% Similarity=0.112 Sum_probs=58.4
Q ss_pred CeEEE-ecCCEEEEEEEeCCCCC-----eeEEE--ccccc-------------cCCCCCCCCCCcccccCCCCCeEEEEE
Q 008366 56 PTIRV-QEGDTLIVHVSNESPYN-----ITIHW--HGIFQ-------------IRSIWADGPNMITQCPIRPGNSYTYKF 114 (568)
Q Consensus 56 P~i~v-~~Gd~v~i~l~N~l~~~-----~~iH~--HG~~~-------------~~~~~~DG~~~~~~~~i~PG~~~~y~f 114 (568)
..|.| ++||+|+|+|+|....+ |++-+ +|... .-....|..-.-....|.||++.++.|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLVLTKDADKQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIGGGESDSVTF 97 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCEEEEGGGHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEEEcCccchhhhHHHhhhhcccccccccccccceeeeeEECCCCEEEEEE
Confidence 48999 99999999999997553 55443 23110 000000110000112589999999999
Q ss_pred EeCC--CCCc-eeEecChhhhhhcceEEEEEe
Q 008366 115 RIIN--QEGT-LWWHAHISMLRATVHGAFIIR 143 (568)
Q Consensus 115 ~~~~--~~Gt-~~YH~h~~~~~~Gl~G~liV~ 143 (568)
++ . .+|+ |||.|...+...||.|.|+|.
T Consensus 98 ~~-~~l~~G~~Y~f~C~~pgH~~gM~G~i~V~ 128 (129)
T 2ccw_A 98 DV-SKIAAGENYAYFCSFPGHWAMMKGTLKLG 128 (129)
T ss_dssp EG-GGSCTTCCEEEECCSTTGGGTSEEEEEEC
T ss_pred ec-cccCCCceEEEEeCCCChhHcCEEEEEEe
Confidence 98 5 6655 999998777666999999995
No 108
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=98.11 E-value=9.3e-06 Score=69.37 Aligned_cols=75 Identities=11% Similarity=0.120 Sum_probs=50.2
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecChhhhhhc
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT 135 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~G 135 (568)
+.|++++||+|++ .|... +|++..+.- .+-||... ....||++++|.| +.+|+|+|+|..|.. .|
T Consensus 21 ~~i~V~~GdtV~f--~~~~~-~H~v~~~~~-----~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~~-~g 85 (123)
T 1paz_A 21 AYIKANPGDTVTF--IPVDK-GHNVESIKD-----MIPEGAEK---FKSKINENYVLTV---TQPGAYLVKCTPHYA-MG 85 (123)
T ss_dssp SEEEECTTCEEEE--EESSS-SCCCEECTT-----CSCTTCCC---CBCCTTCCEEEEC---CSCEEEEEECTTTGG-GT
T ss_pred CEEEECCCCEEEE--EECCC-CeEEEEecc-----cCCCCccc---eecCCCCEEEEEe---CCCEEEEEEeCCccc-CC
Confidence 6999999999755 55533 555554311 11133211 2356999887777 679999999975322 39
Q ss_pred ceEEEEEecC
Q 008366 136 VHGAFIIRPK 145 (568)
Q Consensus 136 l~G~liV~~~ 145 (568)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1paz_A 86 MIALIAVGDS 95 (123)
T ss_dssp CEEEEEESSS
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 109
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=98.11 E-value=1.3e-05 Score=68.89 Aligned_cols=87 Identities=10% Similarity=0.109 Sum_probs=59.5
Q ss_pred CeEEE-ecCCEEEEEEEeCCCCC-----eeEEEcccc-----------c----cCCCCCCCCCCcccccCCCCCeEEEEE
Q 008366 56 PTIRV-QEGDTLIVHVSNESPYN-----ITIHWHGIF-----------Q----IRSIWADGPNMITQCPIRPGNSYTYKF 114 (568)
Q Consensus 56 P~i~v-~~Gd~v~i~l~N~l~~~-----~~iH~HG~~-----------~----~~~~~~DG~~~~~~~~i~PG~~~~y~f 114 (568)
..|.| +.|++|+|+|+|....+ |++-+-... . .-....|..-.-....|.||++.++.|
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGes~~vtf 96 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAHTSVIGGGETDSVTF 96 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhccceeeCCCCEEEEEE
Confidence 58999 99999999999997654 665443210 0 000000110000112579999999999
Q ss_pred EeCC--CCCc-eeEecChhhhhhcceEEEEEe
Q 008366 115 RIIN--QEGT-LWWHAHISMLRATVHGAFIIR 143 (568)
Q Consensus 115 ~~~~--~~Gt-~~YH~h~~~~~~Gl~G~liV~ 143 (568)
.+ . .+|+ |+|.|...+...||.|.|+|.
T Consensus 97 ~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 127 (128)
T 2iaa_C 97 DV-SKLKEGEDYAFFCSFPGHWSIMKGTIELG 127 (128)
T ss_dssp ES-SCCCTTCCEEEECCSTTCTTTSEEEEEEC
T ss_pred ec-cccCCCceEEEEECCCChhHCCEEEEEEe
Confidence 97 5 7885 999998877766999999995
No 110
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=98.07 E-value=1.8e-05 Score=67.87 Aligned_cols=87 Identities=14% Similarity=0.198 Sum_probs=58.4
Q ss_pred CeEEE-ecCCEEEEEEEeCCCCC-----eeEEE--ccccc-------cCCCCCC----CCCC-c-ccccCCCCCeEEEEE
Q 008366 56 PTIRV-QEGDTLIVHVSNESPYN-----ITIHW--HGIFQ-------IRSIWAD----GPNM-I-TQCPIRPGNSYTYKF 114 (568)
Q Consensus 56 P~i~v-~~Gd~v~i~l~N~l~~~-----~~iH~--HG~~~-------~~~~~~D----G~~~-~-~~~~i~PG~~~~y~f 114 (568)
..|.| ++||+|+|+|+|....+ |++-+ .|... ....-+| +-+. + ....|.||++.++.|
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~pGet~svtf 97 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTKVIGAGEKDSVTF 97 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeeeeeCCCCEEEEEE
Confidence 58999 99999999999997553 66544 22110 0000000 0000 0 112489999999999
Q ss_pred EeCC--CCCc-eeEecChhhhhhcceEEEEEe
Q 008366 115 RIIN--QEGT-LWWHAHISMLRATVHGAFIIR 143 (568)
Q Consensus 115 ~~~~--~~Gt-~~YH~h~~~~~~Gl~G~liV~ 143 (568)
.+ . .+|+ |+|.|-..++..||.|.|+|.
T Consensus 98 ~~-~~l~~G~~Y~f~C~~PgH~~gM~G~i~V~ 128 (128)
T 1nwp_A 98 DV-SKLAAGEKYGFFCSFPGHISMMKGTVTLK 128 (128)
T ss_dssp EG-GGSCTTSCEEEECCSTTCGGGSEEEEEEC
T ss_pred ec-cccCCCceEEEEECCCChhHCCEEEEEEC
Confidence 97 5 6776 999998776666999999984
No 111
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=98.05 E-value=1e-05 Score=69.08 Aligned_cols=75 Identities=15% Similarity=0.261 Sum_probs=50.7
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecChhhhhhc
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT 135 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~G 135 (568)
+.|++++||+|+ +.|... +|++..+. ..+-||... ..+.||++++|.| +.+|+|+|+|..|.. .|
T Consensus 21 ~~i~V~~GdtV~--f~n~~~-~H~v~~~~-----~~~p~~~~~---~~~~pG~t~~~tF---~~~G~y~y~C~~H~~-~g 85 (123)
T 1pmy_A 21 ALVRLKPGDSIK--FLPTDK-GHNVETIK-----GMAPDGADY---VKTTVGQEAVVKF---DKEGVYGFKCAPHYM-MG 85 (123)
T ss_dssp SEEEECTTCEEE--EECSSS-SCCCEECT-----TSSCTTCCC---CBCCTTSCEEEEC---CSCEEEEEECSTTTT-TT
T ss_pred CEEEECCCCEEE--EEECCC-CcEEEEec-----ccCCCCccc---eecCCCCEEEEEe---CCCeEEEEEeCCccc-cC
Confidence 699999999965 556533 55555431 111133211 2467999988777 579999999985322 39
Q ss_pred ceEEEEEecC
Q 008366 136 VHGAFIIRPK 145 (568)
Q Consensus 136 l~G~liV~~~ 145 (568)
|.|.|+|.++
T Consensus 86 M~G~I~V~~~ 95 (123)
T 1pmy_A 86 MVALVVVGDK 95 (123)
T ss_dssp CEEEEEESSC
T ss_pred CEEEEEEcCC
Confidence 9999999864
No 112
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=98.00 E-value=1.1e-05 Score=66.12 Aligned_cols=83 Identities=16% Similarity=0.166 Sum_probs=57.9
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..+.++.|++|+| .|.+. ..|.++++...+- .+ .+. .. ....++.+.+.+|....+.| +
T Consensus 17 ~~i~v~~G~tV~~--~n~~~---~~H~v~~~~~~~p---~~---~~~----~~----~~~~~~~~~~~~G~~~~~tf--~ 75 (99)
T 1plc_A 17 SEFSISPGEKIVF--KNNAG---FPHNIVFDEDSIP---SG---VDA----SK----ISMSEEDLLNAKGETFEVAL--S 75 (99)
T ss_dssp SEEEECTTCEEEE--EECSS---CCBCCEECTTSSC---TT---CCH----HH----HCCCTTCCBCSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEE--EECCC---CceEEEEeCCCCc---cc---ccc----cc----cccccCccccCCCCEEEEEE--C
Confidence 5678999999988 56543 7899998864320 00 000 00 00124556788988777755 6
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
.||.|.|||+ .|.++||.+.|.|+
T Consensus 76 ~~G~y~~~C~--~H~~~gM~G~i~V~ 99 (99)
T 1plc_A 76 NKGEYSFYCS--PHQGAGMVGKVTVN 99 (99)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEEC
T ss_pred CCceEEEEcC--CCcccCCEEEEEEC
Confidence 9999999999 79999999999884
No 113
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.93 E-value=3.7e-05 Score=80.95 Aligned_cols=89 Identities=16% Similarity=0.272 Sum_probs=64.9
Q ss_pred eeeEEEECCCCCCCeEEEecCCEEEEEEEeCC---CCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCC
Q 008366 43 QQTITAVNGSLPGPTIRVQEGDTLIVHVSNES---PYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQ 119 (568)
Q Consensus 43 ~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l---~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~ 119 (568)
+..+...+-++--+.|+|++||+|++.|+|.. ...|++...++ |+ ..-+.||++.++.|++ ++
T Consensus 545 ~V~Mta~~~~FsP~eI~VP~GdtVrfiLTN~D~veDViHSF~IPsl---------GI----K~DaiPGrtnsvtFta-dk 610 (638)
T 3sbq_A 545 RVYMTSMAPAFGVQEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNH---------GV----SMEISPQQTSSITFVA-DK 610 (638)
T ss_dssp EEEEEEETTEESCCEEEEETTCEEEEEEEECCCSTTCCEEEEETTT---------TE----EEEECTTCEEEEEEEC-CS
T ss_pred EEEEEEEcccccCCEEEEecCceeEEEEecCCcCCCceeeeEecCC---------Cc----eeeeCCCCeEEEEEEc-CC
Confidence 34455556666547999999999999999974 33444433322 11 1258899999999998 99
Q ss_pred CCceeEecChhh-hhh-cceEEEEEecC
Q 008366 120 EGTLWWHAHISM-LRA-TVHGAFIIRPK 145 (568)
Q Consensus 120 ~Gt~~YH~h~~~-~~~-Gl~G~liV~~~ 145 (568)
+|+|||+|...- ..+ +|.|.|+|+|+
T Consensus 611 PGvY~y~CSE~CGa~Hs~M~G~ViVEPa 638 (638)
T 3sbq_A 611 PGLHWYYCSWFCHALHMEMVGRMMVEPA 638 (638)
T ss_dssp CEEEEEECCSCCSTTCTTCEEEEEEECC
T ss_pred CEEEEEECCCcCCCCcccceEEEEEecC
Confidence 999999998532 222 89999999874
No 114
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.90 E-value=4.5e-05 Score=81.96 Aligned_cols=77 Identities=21% Similarity=0.360 Sum_probs=63.3
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
+.+.++.|+.|+|.+.|.....+..|.|+++++.+. ..+.||....+.|+++
T Consensus 513 p~I~V~~Gd~V~~~ltN~d~~~Dv~Hgf~ip~~gv~----------------------------~~i~PG~t~t~~Fta~ 564 (595)
T 1fwx_A 513 ESFTVKEGDEVTVIVTNLDEIDDLTHGFTMGNYGVA----------------------------MEIGPQMTSSVTFVAA 564 (595)
T ss_dssp SEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECC
T ss_pred CEEEEECCCEEEEEEEeCCCCCCceeeEEecCCCcc----------------------------eeeCCCCeEEEEEECC
Confidence 677899999999999996432335899998875321 3678899999999999
Q ss_pred CceeEEEEee---cccccccccEEEEEEec
Q 008366 524 NPGVWFMHCH---FDVHLPWGLATTFIVEN 550 (568)
Q Consensus 524 npG~w~~HCH---il~H~d~GM~~~~~V~~ 550 (568)
.||.|.|||| ...|. ||.+.++|.+
T Consensus 565 ~pGtY~yhC~e~Cg~~H~--gM~G~IiV~p 592 (595)
T 1fwx_A 565 NPGVYWYYCQWFCHALHM--EMRGRMLVEP 592 (595)
T ss_dssp SCEEEEEECCSCCSTTCT--TCEEEEEEEC
T ss_pred CCEEEEEECCCCCCCCcc--CCEEEEEEEc
Confidence 9999999999 45675 9999999975
No 115
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=97.89 E-value=2.9e-05 Score=66.15 Aligned_cols=73 Identities=14% Similarity=0.191 Sum_probs=50.9
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecChhhhhhc
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRAT 135 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~G 135 (568)
+.|++++||+|++ .|... .|+++..... +-+|.. ...+.||++++|.| +.+|+|+|+|..|..
T Consensus 21 ~~i~V~~GdtV~f--~n~d~-~H~v~~~~~~-----~p~~~~---~~~~~~g~t~~~tF---~~~G~y~y~C~~H~~--- 83 (122)
T 2ux6_A 21 ASLKVAPGDTVTF--IPTDK-GHNVETIKGM-----IPDGAE---AFKSKINENYKVTF---TAPGVYGVKCTPHPF--- 83 (122)
T ss_dssp SEEEECTTEEEEE--EESSS-SCCCEECTTC-----SCTTCC---CCBCCTTCCEEEEE---CSCEEEEEEETTEEE---
T ss_pred CEEEECCCCEEEE--EECCC-CcEEEEcccc-----cCCCcc---eeecCCCCEEEEEe---CCCEEEEEEeCCCcc---
Confidence 6999999998655 56643 5666554311 113321 12467999988888 678999999987543
Q ss_pred ceEEEEEecC
Q 008366 136 VHGAFIIRPK 145 (568)
Q Consensus 136 l~G~liV~~~ 145 (568)
|.|.|+|.+.
T Consensus 84 M~G~I~V~~~ 93 (122)
T 2ux6_A 84 MVGVVQVGDA 93 (122)
T ss_dssp EEEEEEESSS
T ss_pred CEEEEEEeCC
Confidence 9999999864
No 116
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=97.88 E-value=8e-05 Score=66.24 Aligned_cols=89 Identities=15% Similarity=0.230 Sum_probs=61.2
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCce---eeEEeCCCc--EEEE
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRR---NTIAVPIGG--WAVI 518 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~r---DTv~vp~~g--~~~i 518 (568)
+.++++.|++|.+++.|.+. ...|-+-++.. +. .+..... ..+... -+..|.||+ ...+
T Consensus 61 p~i~V~~GD~V~~~~tN~~~--~~~H~~~i~~~-------~~-~~~~~~~------~~~~~~~~~~~~~i~PG~sgt~t~ 124 (154)
T 2cal_A 61 PTLEIPAGATVDVTFINTNK--GFGHSFDITKK-------GP-PYAVMPV------IDPIVAGTGFSPVPKDGKFGYTDF 124 (154)
T ss_dssp CEEEECTTCEEEEEEEECCT--TCCCCCEEESC-------CS-CCCSSCC------CCSEEEEBCCCCCCBTTBEEEEEE
T ss_pred CEEEEeCCCEEEEEEEcCCC--CeeeEEEEeec-------Cc-chhcccc------ccccccccccccccCCCCceEEEE
Confidence 57899999999999999631 25666655522 10 1110000 000000 012578898 8999
Q ss_pred EEEecCceeEEEEeecccccccccEEEEEEe
Q 008366 519 RFRANNPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 519 rf~adnpG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
.|++ .||.+.||||+.-|...||-+.|+|+
T Consensus 125 tft~-~pGtY~y~C~~~gH~~~GM~G~IiV~ 154 (154)
T 2cal_A 125 TWHP-TAGTYYYVCQIPGMAATGMFGKIVVK 154 (154)
T ss_dssp EECC-CSEEEEEECCSTTTGGGTCEEEEEEC
T ss_pred EEEE-CCceEEEECCCCCHHHCCCEEEEEEC
Confidence 9999 99999999999999999999999874
No 117
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=97.83 E-value=6.3e-05 Score=62.33 Aligned_cols=73 Identities=19% Similarity=0.227 Sum_probs=51.2
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..+.++.|++|+|+ |.+. ..|.+|.|... .| ... + +.-.+++|+...+.| +
T Consensus 33 ~~i~v~~Gd~V~~~--N~d~---~~H~v~~~~~~-------~g-------~~~-------~-~~~~~~pG~~~~~tf--~ 83 (105)
T 2ov0_A 33 PELHVKVGDTVTWI--NREA---MPHNVHFVAGV-------LG-------EAA-------L-KGPMMKKEQAYSLTF--T 83 (105)
T ss_dssp SEEEECTTCEEEEE--ECSS---SCBCCEECTTT-------SS-------SSC-------E-ECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECCC---CCEEEEEcCCC-------CC-------ccc-------c-cccccCCCCEEEEEe--C
Confidence 56789999999885 6543 78999987521 01 000 1 112467887665554 8
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
.||.|.|||++ |. ||.+.|.|+
T Consensus 84 ~~G~y~y~C~~--H~--gM~G~i~V~ 105 (105)
T 2ov0_A 84 EAGTYDYHCTP--HP--FMRGKVVVE 105 (105)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999997 65 999999874
No 118
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=97.47 E-value=0.00076 Score=56.96 Aligned_cols=85 Identities=9% Similarity=0.144 Sum_probs=53.7
Q ss_pred CeEEEec-CCEEEEEEEeCCCC-----CeeEEEc--c---------cccc-CCCCC-CCCCCc--ccccCCCCCeEEEEE
Q 008366 56 PTIRVQE-GDTLIVHVSNESPY-----NITIHWH--G---------IFQI-RSIWA-DGPNMI--TQCPIRPGNSYTYKF 114 (568)
Q Consensus 56 P~i~v~~-Gd~v~i~l~N~l~~-----~~~iH~H--G---------~~~~-~~~~~-DG~~~~--~~~~i~PG~~~~y~f 114 (568)
..|.|++ |++|+|+|.|.... .|++=+- + +..- ...++ .+-+.+ ....|.||++.+..|
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~pGes~~vtf 97 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIGSGEKDSVTF 97 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBCTTCEEEEEE
T ss_pred CEEEEecCCCEEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccceeCCCcEEEEEE
Confidence 6899986 99999999999754 2443331 1 1100 00111 011111 112489999999999
Q ss_pred EeC--CCCCceeEecChhhhhhcceEEEEEe
Q 008366 115 RII--NQEGTLWWHAHISMLRATVHGAFIIR 143 (568)
Q Consensus 115 ~~~--~~~Gt~~YH~h~~~~~~Gl~G~liV~ 143 (568)
+.+ ..+|+|.|.|. +.. ||.|.++|.
T Consensus 98 ~~~~l~~~G~y~f~C~--gH~-~M~G~v~V~ 125 (125)
T 3fsa_A 98 DVSKLKEGEQYMFFCA--AHA-AMKGTLTLK 125 (125)
T ss_dssp EGGGC---CCEEEECS--SST-TCEEEEEEC
T ss_pred eCcCcCCCccEEEEcC--CCC-CcEEEEEEC
Confidence 984 28999999999 444 999999984
No 119
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=97.26 E-value=0.00097 Score=54.22 Aligned_cols=81 Identities=21% Similarity=0.247 Sum_probs=54.2
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..+.++.|++|+|+ |.+. ..|.+.++.. .+.. ..+ ......+...+.+|....+.| +
T Consensus 18 ~~i~v~~GdtV~~~--n~~~---~~H~v~~~~~----------~~p~-----g~~-~~~~~~~~~~~~~g~~~~~tf--~ 74 (98)
T 1iuz_A 18 SKISVAAGEAIEFV--NNAG---FPHNIVFDED----------AVPA-----GVD-ADAISYDDYLNSKGETVVRKL--S 74 (98)
T ss_dssp SEEEECTTCEEEEE--ECSS---CCEEEEECTT----------SSCT-----TCC-HHHHCEEEEECSTTCEEEEEC--C
T ss_pred CEEEECCCCEEEEE--ECCC---CCEEEEEeCC----------CCcc-----ccc-cccccccccccCCCCEEEEEc--C
Confidence 56789999999986 5432 5676655431 0000 000 000124456788998777765 8
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
.||.|.|+|-+ |..+||-+.|.|+
T Consensus 75 ~~G~y~y~C~~--H~~~gM~G~I~V~ 98 (98)
T 1iuz_A 75 TPGVYGVYCEP--HAGAGMKMTITVQ 98 (98)
T ss_dssp SCEEEEEECTT--TGGGTCEEEEEEC
T ss_pred CCEEEEEEchh--hccCCCEEEEEEC
Confidence 99999999985 9999999999884
No 120
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=97.23 E-value=0.00077 Score=57.24 Aligned_cols=76 Identities=16% Similarity=0.210 Sum_probs=51.4
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..++++.|++|+|++.+ ..|.+..+.. .+... .+...+.++....+. ++
T Consensus 22 ~~i~V~~GDTV~f~n~~------~~Hnv~~~~~----------~~p~g-------------~~~~~~~pg~t~s~T--F~ 70 (124)
T 3ef4_A 22 GFVKVEAGDTVKFVPTD------KSHNAESVRE----------VWPEG-------------VAPVKGGFSKEVVFN--AE 70 (124)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECTT----------TSCTT-------------SCCCBCCTTCCEEEE--CC
T ss_pred CEEEECCCCEEEEEECC------CCccEEEeCC----------cCCCC-------------ccccccCCCCEEEEE--eC
Confidence 46689999999998543 4576665421 11100 011234566655554 48
Q ss_pred CceeEEEEeecccccccccEEEEEEecCC
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVENGP 552 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~~~~ 552 (568)
.||.|.|||- .|..+||.+.|.|.++.
T Consensus 71 ~~G~y~Y~C~--~H~~~GM~G~I~V~~p~ 97 (124)
T 3ef4_A 71 KEGLYVLKCA--PHYGMGMVVLVQVGKPV 97 (124)
T ss_dssp SSEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CCeEEEEEcC--CCCcCCCEEEEEECCCC
Confidence 9999999995 89999999999998743
No 121
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=97.19 E-value=0.00067 Score=57.99 Aligned_cols=76 Identities=20% Similarity=0.273 Sum_probs=50.6
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..+.++.|++|+|++.| ..|.+..+... + +. .. ..+.+.|+... .++++
T Consensus 23 ~~i~V~~GDtVtf~n~~------~~H~v~~~~~~----------~-P~-g~-----------~~f~s~pGet~--s~TF~ 71 (127)
T 3tu6_A 23 AVIRAQPGDTVTFVAKD------KGHNSALMKGG----------A-PE-GA-----------ETWKGKINEEI--TVTLS 71 (127)
T ss_dssp SEEEECTTCEEEEECSS------SSCCCEECTTC----------S-CT-TC-----------CCCBCCTTCCC--EEECC
T ss_pred CEEEECCCCEEEEEECC------CCceEEEccCc----------C-CC-Cc-----------cceecCCCCEE--EEEeC
Confidence 56789999999998765 23555543210 0 10 00 01122456654 44558
Q ss_pred CceeEEEEeecccccccccEEEEEEecCC
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVENGP 552 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~~~~ 552 (568)
.||.|.|||- .|..+||-+.|.|.+++
T Consensus 72 ~pG~y~y~C~--~H~~~GM~G~I~V~~~~ 98 (127)
T 3tu6_A 72 KPGVYMYQCA--PHVGMGMIGAIVVGEPA 98 (127)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEESSCT
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECcCC
Confidence 9999999999 79999999999998754
No 122
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=97.18 E-value=0.0011 Score=56.22 Aligned_cols=75 Identities=13% Similarity=0.224 Sum_probs=50.9
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..++++.|++|+|++.| ..|.+..+.. .+ +. +. +...+.|++...+.| +
T Consensus 21 ~~i~V~~GdtV~f~~~~------~~H~v~~~~~----------~~-P~-g~-----------~~f~~~pg~t~s~TF--~ 69 (123)
T 3erx_A 21 AFVRAEPGDVINFVPTD------KSHNVEAIKE----------IL-PE-GV-----------ESFKSKINESYTLTV--T 69 (123)
T ss_dssp SEEEECTTEEEEEEESS------TTCCCEECTT----------SS-CT-TC-----------CCCBCCTTCCEEEEE--C
T ss_pred CEEEECCCCEEEEEECC------CCceEEEcCC----------cC-CC-Cc-----------cceecCCCCEEEEEe--C
Confidence 46689999999998876 3366554421 00 00 00 011234666555554 8
Q ss_pred CceeEEEEeecccccccccEEEEEEecC
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVENG 551 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~~~ 551 (568)
.||.|.|+|- .|..+||.+.|.|+++
T Consensus 70 ~pG~y~y~C~--~H~~~GM~G~I~V~~~ 95 (123)
T 3erx_A 70 EPGLYGVKCT--PHFGMGMVGLVQVGDA 95 (123)
T ss_dssp SCEEEEEECG--GGTTTTCEEEEEESSS
T ss_pred CCeEEEEEeC--CCCcCCcEEEEEECCC
Confidence 9999999999 8999999999999863
No 123
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=96.94 E-value=0.0033 Score=51.84 Aligned_cols=73 Identities=22% Similarity=0.184 Sum_probs=49.8
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..+.++.|++|+|+ |.+. ..|.+++....- + .. .-++-.+.+|....+.| +
T Consensus 34 ~~i~V~~G~tV~~~--N~d~---~~H~v~~~~~~~-----~---------~~--------~~~s~~l~~g~~~~~tf--~ 84 (106)
T 1id2_A 34 PEVTIKAGETVYWV--NGEV---MPHNVAFKKGIV-----G---------ED--------AFRGEMMTKDQAYAITF--N 84 (106)
T ss_dssp SEEEECTTCEEEEE--ECSS---SCBCCEECTTTS-----S---------SS--------CEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECCC---CcEEEEEeCCCC-----C---------cc--------cccccccCCCCEEEEEe--C
Confidence 56789999999987 6543 567766543210 0 00 01223567887766665 8
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
.||.|.|+|-+ |. ||.+.|.|+
T Consensus 85 ~~G~y~~~C~~--H~--~M~G~I~V~ 106 (106)
T 1id2_A 85 EAGSYDYFCTP--HP--FMRGKVIVE 106 (106)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--CC--CCEEEEEEC
Confidence 99999999976 86 999999874
No 124
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=96.73 E-value=0.0065 Score=52.27 Aligned_cols=73 Identities=22% Similarity=0.184 Sum_probs=50.5
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..+.++.|++|+|+ |.+. ..|.+++.... .| .. .-++-.+.+|....+.| +
T Consensus 60 ~~i~V~~GdtV~~~--N~d~---~~H~v~~~~~~-------~g-------~~--------~~~s~~l~pG~t~~~tF--~ 110 (132)
T 3c75_A 60 PEVTIKAGETVYWV--NGEV---MPHNVAFKKGI-------VG-------ED--------AFRGEMMTKDQAYAITF--N 110 (132)
T ss_dssp SEEEECTTCEEEEE--ECSS---SCBCCEECTTT-------SS-------SS--------CEECCCBCTTEEEEEEE--C
T ss_pred CEEEECCCCEEEEE--ECCC---CceEEEEeCCC-------CC-------cc--------cccccccCCCCEEEEEc--C
Confidence 56789999999986 6543 67877764321 00 00 11233567887776665 7
Q ss_pred CceeEEEEeecccccccccEEEEEEe
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
.||.|.|||-+ |. ||-+.|.|+
T Consensus 111 ~~G~y~y~C~~--H~--gM~G~I~V~ 132 (132)
T 3c75_A 111 EAGSYDYFCTP--HP--FMRGKVIVE 132 (132)
T ss_dssp SCEEEEEECSS--CT--TCEEEEEEC
T ss_pred CCEEEEEEeCC--Cc--CCEEEEEEC
Confidence 99999999976 87 999999884
No 125
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=96.70 E-value=0.0049 Score=52.30 Aligned_cols=75 Identities=13% Similarity=0.245 Sum_probs=48.4
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..+.++.|++|.|+..+ ..|.+.++- + ..+. +... +.+.+|... .+.++
T Consensus 21 ~~i~V~~GdtV~f~~~~------~~H~v~~~~--------~---~~p~-~~~~-----------~~~~pG~t~--~~tF~ 69 (123)
T 1paz_A 21 AYIKANPGDTVTFIPVD------KGHNVESIK--------D---MIPE-GAEK-----------FKSKINENY--VLTVT 69 (123)
T ss_dssp SEEEECTTCEEEEEESS------SSCCCEECT--------T---CSCT-TCCC-----------CBCCTTCCE--EEECC
T ss_pred CEEEECCCCEEEEEECC------CCeEEEEec--------c---cCCC-Cccc-----------eecCCCCEE--EEEeC
Confidence 46689999999886553 235555431 0 0000 0000 112466644 45558
Q ss_pred CceeEEEEeecccccccccEEEEEEecC
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVENG 551 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~~~ 551 (568)
.||.|.|+|- .|..+||-+.|.|.++
T Consensus 70 ~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1paz_A 70 QPGAYLVKCT--PHYAMGMIALIAVGDS 95 (123)
T ss_dssp SCEEEEEECT--TTGGGTCEEEEEESSS
T ss_pred CCEEEEEEeC--CcccCCCEEEEEEcCC
Confidence 9999999997 6999999999999863
No 126
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=96.54 E-value=0.01 Score=51.15 Aligned_cols=74 Identities=12% Similarity=0.244 Sum_probs=52.8
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecChh-hhh-
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHIS-MLR- 133 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~-~~~- 133 (568)
..|.++.|++|++.++|. +..++ ..... -|. ..-+.||+..++.|++ +++|+|.|+|... +..
T Consensus 60 ~~l~Vp~G~~V~~~vts~-DV~Hs-----f~ip~----~~~----k~d~~PG~~~~~~~~~-~~~G~y~~~C~e~CG~~H 124 (135)
T 2cua_A 60 NPIEVPQGAEIVFKITSP-DVIHG-----FHVEG----TNI----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 124 (135)
T ss_dssp SSEEEETTSEEEEEEEBS-SSCEE-----EEETT----SSC----EEEECBTBCEEEEEEC-CSCEEEEEECCSCCSTTS
T ss_pred CEEEEcCCCEEEEEEEeC-Cccce-----EEecC----CCc----eeEeCCCCcEEEEEEc-CCCEEEEEECcccCCCCc
Confidence 489999999999999997 33333 33221 111 1247899999999997 9999999999541 112
Q ss_pred hcceEEEEEec
Q 008366 134 ATVHGAFIIRP 144 (568)
Q Consensus 134 ~Gl~G~liV~~ 144 (568)
.+|.|.++|.+
T Consensus 125 ~~M~g~v~V~~ 135 (135)
T 2cua_A 125 QNMFGTIVVKE 135 (135)
T ss_dssp TTCEEEEEEEC
T ss_pred CCCEEEEEEEC
Confidence 28889998863
No 127
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=96.52 E-value=0.0063 Score=51.60 Aligned_cols=38 Identities=24% Similarity=0.454 Sum_probs=30.5
Q ss_pred eCCCcEEEEEEEecCceeEEEEeecccccccccEEEEEEecC
Q 008366 510 VPIGGWAVIRFRANNPGVWFMHCHFDVHLPWGLATTFIVENG 551 (568)
Q Consensus 510 vp~~g~~~irf~adnpG~w~~HCHil~H~d~GM~~~~~V~~~ 551 (568)
+.+|.... +.++.||.|.|+|- .|..+||.+.|.|.+.
T Consensus 58 ~~pG~t~~--~tF~~~G~y~y~C~--~H~~~gM~G~I~V~~~ 95 (123)
T 1pmy_A 58 TTVGQEAV--VKFDKEGVYGFKCA--PHYMMGMVALVVVGDK 95 (123)
T ss_dssp CCTTSCEE--EECCSCEEEEEECS--TTTTTTCEEEEEESSC
T ss_pred cCCCCEEE--EEeCCCeEEEEEeC--CccccCCEEEEEEcCC
Confidence 34666544 45589999999997 5999999999999863
No 128
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=96.27 E-value=0.019 Score=51.21 Aligned_cols=74 Identities=15% Similarity=0.302 Sum_probs=55.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecCh-hhhhh
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI-SMLRA 134 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~-~~~~~ 134 (568)
..|.++.|++|++.++|. +-.|++..-++. . +.-+.||+..++.|++ +++|+|++.|.. -+...
T Consensus 93 n~l~VP~G~~Vr~~vTS~-DViHsf~IP~lg---------i----k~da~PG~~n~~~~~~-~kpG~y~g~Cse~CG~~H 157 (168)
T 3s8f_B 93 NPIEVPQGAEIVFKITSP-DVIHGFHVEGTN---------I----NVEVLPGEVSTVRYTF-KRPGEYRIICNQYCGLGH 157 (168)
T ss_dssp SSEEEETTSEEEEEEECS-SSCEEEEETTSS---------C----EEEECTTBCEEEEEEC-CSCEEEEEECCSCCSTTG
T ss_pred CEEEEeCCCeEEEEEecC-CceEEEEECCCC---------e----EEEecCCceeEEEEEe-CCCEEEEEECCcCCCCCc
Confidence 589999999999999997 444444332221 1 1236799999999998 999999999984 34443
Q ss_pred -cceEEEEEec
Q 008366 135 -TVHGAFIIRP 144 (568)
Q Consensus 135 -Gl~G~liV~~ 144 (568)
+|.|-++|.+
T Consensus 158 s~M~g~V~V~e 168 (168)
T 3s8f_B 158 QNMFGTIVVKE 168 (168)
T ss_dssp GGCEEEEEEEC
T ss_pred CCCEEEEEEeC
Confidence 8999999863
No 129
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.20 E-value=0.027 Score=59.52 Aligned_cols=79 Identities=19% Similarity=0.254 Sum_probs=62.1
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..+.++.|+.|+|++.|.+...+..|.|.+.+.... +.+.||....+.|+++
T Consensus 558 ~eI~VP~GdtVrfiLTN~D~veDViHSF~IPslGIK----------------------------~DaiPGrtnsvtFtad 609 (638)
T 3sbq_A 558 QEFTVKQGDEVTVTITNIDQIEDVSHGFVVVNHGVS----------------------------MEISPQQTSSITFVAD 609 (638)
T ss_dssp CEEEEETTCEEEEEEEECCCSTTCCEEEEETTTTEE----------------------------EEECTTCEEEEEEECC
T ss_pred CEEEEecCceeEEEEecCCcCCCceeeeEecCCCce----------------------------eeeCCCCeEEEEEEcC
Confidence 567899999999999996422347888877654321 2577888999999999
Q ss_pred CceeEEEEeecccccc-cccEEEEEEec
Q 008366 524 NPGVWFMHCHFDVHLP-WGLATTFIVEN 550 (568)
Q Consensus 524 npG~w~~HCHil~H~d-~GM~~~~~V~~ 550 (568)
.||.|.++|...-|.. .+|.+.++|++
T Consensus 610 kPGvY~y~CSE~CGa~Hs~M~G~ViVEP 637 (638)
T 3sbq_A 610 KPGLHWYYCSWFCHALHMEMVGRMMVEP 637 (638)
T ss_dssp SCEEEEEECCSCCSTTCTTCEEEEEEEC
T ss_pred CCEEEEEECCCcCCCCcccceEEEEEec
Confidence 9999999999866653 68999999873
No 130
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=95.75 E-value=0.074 Score=45.29 Aligned_cols=97 Identities=9% Similarity=0.111 Sum_probs=63.1
Q ss_pred eEEEcccC-CEEEEEEEeCCcCC--CCCCceeecCCcEEEEEeCCCCCCCC-----CCCCCCcC----CCCCceeeEEeC
Q 008366 444 SVKMLKFN-STVEMVLQNTALIA--VESHPMHLHGYDFYVLAQGFGNYNAS-----RDSKNFNL----VNPQRRNTIAVP 511 (568)
Q Consensus 444 ~~~~~~~g-~~ve~~l~N~~~~~--~~~HP~HlHG~~F~Vv~~~~g~~~~~-----~~~~~~~~----~~p~~rDTv~vp 511 (568)
..+.++.| +.|.+++.|.+.+. .+.|-| -+...+. ++.. ......++ ..-....+..|.
T Consensus 18 ~~i~V~~G~~~vtv~~~N~g~~~~~~m~H~~-------vi~~~~~--~~~~~~~~m~~~~~~~~v~~~~~~~~~~t~~l~ 88 (129)
T 1cuo_A 18 RSISVPASCAEFTVNFEHKGHMPKTGMGHNW-------VLAKSAD--VGDVAKEGAHAGADNNFVTPGDKRVIAFTPIIG 88 (129)
T ss_dssp SEEEEETTCSEEEEEEEECSSSCHHHHCBCC-------EEEEGGG--HHHHHHHHHTTCGGGTTSCTTCTTCSEECCCBC
T ss_pred CeEEEcCCCeEEEEEEEECCCCcccccccce-------EEecCcc--hhhhHHHhhhccccccccccccccceeeeeEEC
Confidence 56789999 99999999976411 123554 3333221 0000 00000000 011234566789
Q ss_pred CCcEEEEEEEec---CceeEEEEeecccccccccEEEEEEec
Q 008366 512 IGGWAVIRFRAN---NPGVWFMHCHFDVHLPWGLATTFIVEN 550 (568)
Q Consensus 512 ~~g~~~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~~ 550 (568)
||....+.|.++ .||.|-|.|-+--|.. ||-+.+.|++
T Consensus 89 pGet~svtf~~~~~~~~G~Y~f~C~~pgH~~-~M~G~i~V~~ 129 (129)
T 1cuo_A 89 GGEKTSVKFKVSALSKDEAYTYFCSYPGHFS-MMRGTLKLEE 129 (129)
T ss_dssp TTCEEEEEEEGGGCCTTSCEEEECCSTTCTT-TSEEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCCchH-cCEEEEEEeC
Confidence 999999999997 8999999999999998 8999999863
No 131
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=95.68 E-value=0.037 Score=49.35 Aligned_cols=97 Identities=10% Similarity=0.085 Sum_probs=62.5
Q ss_pred eEEEc-ccCCEEEEEEEeCCcCC--CCCCceeecCCcEEEEEeCCCCCCCC------CCCCCC-c-CCCCCceeeEEeCC
Q 008366 444 SVKML-KFNSTVEMVLQNTALIA--VESHPMHLHGYDFYVLAQGFGNYNAS------RDSKNF-N-LVNPQRRNTIAVPI 512 (568)
Q Consensus 444 ~~~~~-~~g~~ve~~l~N~~~~~--~~~HP~HlHG~~F~Vv~~~~g~~~~~------~~~~~~-~-~~~p~~rDTv~vp~ 512 (568)
..+.+ +.|+.|.|+|.|.+... ++.|-| -+...+. ++.. .....| . -..-....+..|.+
T Consensus 58 ~~itV~kaG~~Vtv~~~N~g~~p~~~m~Hn~-------vi~~~~~--~~~v~~~~m~~~~~~~v~~~d~~vl~~t~~l~p 128 (167)
T 3ay2_A 58 KDIQVSKACKEFTITLKHTGTQPKASMGHNL-------VIAKAED--MDGVFKDGVGAADTDYVKPDDARVVAHTKLIGG 128 (167)
T ss_dssp SEEEEETTCSSEEEEEEECSCSCHHHHCBCC-------EEEEGGG--HHHHHHHHGGGGGGTTSCTTCTTEEEECCCBCT
T ss_pred ceEEEecCCCEEEEEEEECCCCccccccceE-------EeccCcc--hhhhHHHhhhccccccccccccchhccceeeCC
Confidence 45678 89999999999976410 123543 3332210 0000 000000 0 00112345667899
Q ss_pred CcEEEEEEEec--CceeEEEEeecccccccccEEEEEEec
Q 008366 513 GGWAVIRFRAN--NPGVWFMHCHFDVHLPWGLATTFIVEN 550 (568)
Q Consensus 513 ~g~~~irf~ad--npG~w~~HCHil~H~d~GM~~~~~V~~ 550 (568)
|....+.|.++ .||.|-|+|-+--|.. ||-+.|+|++
T Consensus 129 Get~svtf~~~~lkpG~Y~f~Ct~PgH~~-gM~G~i~V~~ 167 (167)
T 3ay2_A 129 GEESSLTLDPAKLADGDYKFACTFPGHGA-LMNGKVTLVD 167 (167)
T ss_dssp TCEEEEEECGGGGTTSCEEEECCSTTGGG-TSEEEEEEEC
T ss_pred CCEEEEEEecCCCCCcEEEEEcCCCCchh-cCEEEEEEeC
Confidence 99999999998 8999999999999998 9999999863
No 132
>2cua_A Protein (CUA); CUA center, electron transport; 1.60A {Thermus thermophilus} SCOP: b.6.1.2 PDB: 2fwl_B*
Probab=95.48 E-value=0.069 Score=45.89 Aligned_cols=71 Identities=15% Similarity=0.218 Sum_probs=51.8
Q ss_pred EEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEecC
Q 008366 445 VKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRANN 524 (568)
Q Consensus 445 ~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 524 (568)
.+.++.|+.|+|++.|.+ ..|.| .+-+.+ --+.+.||....+.|+++.
T Consensus 61 ~l~Vp~G~~V~~~vts~D----V~Hsf-------~ip~~~---------------------~k~d~~PG~~~~~~~~~~~ 108 (135)
T 2cua_A 61 PIEVPQGAEIVFKITSPD----VIHGF-------HVEGTN---------------------INVEVLPGEVSTVRYTFKR 108 (135)
T ss_dssp SEEEETTSEEEEEEEBSS----SCEEE-------EETTSS---------------------CEEEECBTBCEEEEEECCS
T ss_pred EEEEcCCCEEEEEEEeCC----ccceE-------EecCCC---------------------ceeEeCCCCcEEEEEEcCC
Confidence 457899999999998742 44443 331110 0134567777889999999
Q ss_pred ceeEEEEeec---ccccccccEEEEEEe
Q 008366 525 PGVWFMHCHF---DVHLPWGLATTFIVE 549 (568)
Q Consensus 525 pG~w~~HCHi---l~H~d~GM~~~~~V~ 549 (568)
||.|.++|.. ..| .+|-+.++|.
T Consensus 109 ~G~y~~~C~e~CG~~H--~~M~g~v~V~ 134 (135)
T 2cua_A 109 PGEYRIICNQYCGLGH--QNMFGTIVVK 134 (135)
T ss_dssp CEEEEEECCSCCSTTS--TTCEEEEEEE
T ss_pred CEEEEEECcccCCCCc--CCCEEEEEEE
Confidence 9999999987 667 4899988886
No 133
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=95.43 E-value=0.045 Score=46.22 Aligned_cols=73 Identities=14% Similarity=0.143 Sum_probs=46.8
Q ss_pred eEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEec
Q 008366 444 SVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRAN 523 (568)
Q Consensus 444 ~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ad 523 (568)
..+.++.|++|.|+..+ ..|-++++.. .+.. .... +.+.++....+. ++
T Consensus 21 ~~i~V~~GdtV~f~n~d------~~H~v~~~~~----------~~p~--~~~~-----------~~~~~g~t~~~t--F~ 69 (122)
T 2ux6_A 21 ASLKVAPGDTVTFIPTD------KGHNVETIKG----------MIPD--GAEA-----------FKSKINENYKVT--FT 69 (122)
T ss_dssp SEEEECTTEEEEEEESS------SSCCCEECTT----------CSCT--TCCC-----------CBCCTTCCEEEE--EC
T ss_pred CEEEECCCCEEEEEECC------CCcEEEEccc----------ccCC--Ccce-----------eecCCCCEEEEE--eC
Confidence 56789999999987432 2466666531 1110 0001 123466655444 48
Q ss_pred CceeEEEEeecccccccccEEEEEEecC
Q 008366 524 NPGVWFMHCHFDVHLPWGLATTFIVENG 551 (568)
Q Consensus 524 npG~w~~HCHil~H~d~GM~~~~~V~~~ 551 (568)
.||.|.|+|-+ |.. |.+.|.|.+.
T Consensus 70 ~~G~y~y~C~~--H~~--M~G~I~V~~~ 93 (122)
T 2ux6_A 70 APGVYGVKCTP--HPF--MVGVVQVGDA 93 (122)
T ss_dssp SCEEEEEEETT--EEE--EEEEEEESSS
T ss_pred CCEEEEEEeCC--Ccc--CEEEEEEeCC
Confidence 99999999976 877 9999999864
No 134
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=94.49 E-value=0.21 Score=42.40 Aligned_cols=96 Identities=15% Similarity=0.155 Sum_probs=60.8
Q ss_pred eEEEc-ccCCEEEEEEEeCCcCC--CCCCceeecCCcEEEEEeCCCCCCCC------C-CCCCCcC-CC-CCceeeEEeC
Q 008366 444 SVKML-KFNSTVEMVLQNTALIA--VESHPMHLHGYDFYVLAQGFGNYNAS------R-DSKNFNL-VN-PQRRNTIAVP 511 (568)
Q Consensus 444 ~~~~~-~~g~~ve~~l~N~~~~~--~~~HP~HlHG~~F~Vv~~~~g~~~~~------~-~~~~~~~-~~-p~~rDTv~vp 511 (568)
..+.+ +.|+.|.+++.|.+.+. ++.|-|- +...+. ++.. . ....|-. .+ -....+..|.
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~v-------i~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~l~ 88 (129)
T 2ccw_A 18 KEIVVDKSCKQFTMHLKHVGKMAKVAMGHNLV-------LTKDAD--KQAVATDGMGAGLAQDYVKAGDTRVIAHTKVIG 88 (129)
T ss_dssp SEEEECTTCSEEEEEEEECSCCCHHHHCBCCE-------EEEGGG--HHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred ceEEEecCCCEEEEEEEECCCcccccCcceEE-------EcCccc--hhhhHHHhhhhcccccccccccccceeeeeEEC
Confidence 45678 88999999999986410 1235443 332210 0000 0 0000000 01 1123455789
Q ss_pred CCcEEEEEEEec--Ccee-EEEEeecccccccccEEEEEEe
Q 008366 512 IGGWAVIRFRAN--NPGV-WFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 512 ~~g~~~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 549 (568)
||+...+-|.++ .||. |-|.|-+--|.. ||-+.+.|.
T Consensus 89 pGet~svtf~~~~l~~G~~Y~f~C~~pgH~~-gM~G~i~V~ 128 (129)
T 2ccw_A 89 GGESDSVTFDVSKIAAGENYAYFCSFPGHWA-MMKGTLKLG 128 (129)
T ss_dssp TTCEEEEEEEGGGSCTTCCEEEECCSTTGGG-TSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEeCCCChhH-cCEEEEEEe
Confidence 999999999998 7866 999999999999 899999986
No 135
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=94.27 E-value=0.25 Score=41.88 Aligned_cols=96 Identities=16% Similarity=0.186 Sum_probs=61.1
Q ss_pred eEEEc-ccCCEEEEEEEeCCcCC--CCCCceeecCCcEEEEEeCCCCCCCC-----CCCCCCcC---CC-CCceeeEEeC
Q 008366 444 SVKML-KFNSTVEMVLQNTALIA--VESHPMHLHGYDFYVLAQGFGNYNAS-----RDSKNFNL---VN-PQRRNTIAVP 511 (568)
Q Consensus 444 ~~~~~-~~g~~ve~~l~N~~~~~--~~~HP~HlHG~~F~Vv~~~~g~~~~~-----~~~~~~~~---~~-p~~rDTv~vp 511 (568)
..+.+ +.|+.|.+++.|.+.+. .+.|-|- +...+ .++.. ......++ .+ -....+..|.
T Consensus 17 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~Hn~v-------i~~~~--~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~ 87 (128)
T 2iaa_C 17 KSIVVDKTCKEFTINLKHTGKLPKAAMGHNVV-------VSKKS--DESAVATDGMKAGLNNDYVKAGDERVIAHTSVIG 87 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSCSCHHHHCBCCE-------EEETT--HHHHHHHHHHHHCGGGTTSCTTCTTEEEECCCBC
T ss_pred CEEEEecCCcEEEEEEEECCCCcccCCCceEE-------Ecccc--chhhHHHhhhhccccccccccccchhhccceeeC
Confidence 45677 88999999999976410 1235543 22211 00000 00000000 01 1234566789
Q ss_pred CCcEEEEEEEec--Ccee-EEEEeecccccccccEEEEEEe
Q 008366 512 IGGWAVIRFRAN--NPGV-WFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 512 ~~g~~~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 549 (568)
||+...+.|.+. .+|. |-|.|-+--|.. ||-+.|.|.
T Consensus 88 pGes~~vtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 127 (128)
T 2iaa_C 88 GGETDSVTFDVSKLKEGEDYAFFCSFPGHWS-IMKGTIELG 127 (128)
T ss_dssp TTCEEEEEEESSCCCTTCCEEEECCSTTCTT-TSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEe
Confidence 999999999998 8995 999999999999 999999986
No 136
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=93.97 E-value=0.3 Score=41.41 Aligned_cols=96 Identities=14% Similarity=0.183 Sum_probs=61.0
Q ss_pred eEEEc-ccCCEEEEEEEeCCcCC--CCCCceeecCCcEEEEEeCCCCCCC-----CCCCCCCcCC---C-CCceeeEEeC
Q 008366 444 SVKML-KFNSTVEMVLQNTALIA--VESHPMHLHGYDFYVLAQGFGNYNA-----SRDSKNFNLV---N-PQRRNTIAVP 511 (568)
Q Consensus 444 ~~~~~-~~g~~ve~~l~N~~~~~--~~~HP~HlHG~~F~Vv~~~~g~~~~-----~~~~~~~~~~---~-p~~rDTv~vp 511 (568)
..+.+ +.|+.|.+++.|.+... .+.|-|-+ ...+. .+. -......++. + -....|-.|.
T Consensus 18 ~~i~V~k~G~~vtv~~~N~g~~p~~~m~H~~vi-------~~~~~--~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~~l~ 88 (128)
T 1nwp_A 18 KDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVI-------SKEAD--MQPIATDGLSAGIDKQYLKDGDARVIAHTKVIG 88 (128)
T ss_dssp SEEEECTTCSEEEEEEEECSSCCHHHHCBCCEE-------EEGGG--HHHHHHHHTTTCGGGTTSCTTCTTEEEECCCBC
T ss_pred CEEEEecCCCEEEEEEEECCCCcccCCCceEEE-------ccccc--hhhHHHHHhhccccccccccccchhheeeeeeC
Confidence 45678 89999999999986410 11355433 22210 000 0000000000 1 1234455789
Q ss_pred CCcEEEEEEEec--Ccee-EEEEeecccccccccEEEEEEe
Q 008366 512 IGGWAVIRFRAN--NPGV-WFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 512 ~~g~~~irf~ad--npG~-w~~HCHil~H~d~GM~~~~~V~ 549 (568)
||+...+.|.+. .||. |-|.|-+--|.. ||-+.+.|+
T Consensus 89 pGet~svtf~~~~l~~G~~Y~f~C~~PgH~~-gM~G~i~V~ 128 (128)
T 1nwp_A 89 AGEKDSVTFDVSKLAAGEKYGFFCSFPGHIS-MMKGTVTLK 128 (128)
T ss_dssp TTCEEEEEEEGGGSCTTSCEEEECCSTTCGG-GSEEEEEEC
T ss_pred CCCEEEEEEeccccCCCceEEEEECCCChhH-CCEEEEEEC
Confidence 999999999998 7877 999999999999 899999873
No 137
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=93.81 E-value=0.36 Score=40.55 Aligned_cols=93 Identities=13% Similarity=0.228 Sum_probs=59.5
Q ss_pred eEEEccc-CCEEEEEEEeCCcCC--CCCCceeecCCcEEEEEeCCCCCCC------CCC-CCCC-c-CCCCCceeeEEeC
Q 008366 444 SVKMLKF-NSTVEMVLQNTALIA--VESHPMHLHGYDFYVLAQGFGNYNA------SRD-SKNF-N-LVNPQRRNTIAVP 511 (568)
Q Consensus 444 ~~~~~~~-g~~ve~~l~N~~~~~--~~~HP~HlHG~~F~Vv~~~~g~~~~------~~~-~~~~-~-~~~p~~rDTv~vp 511 (568)
..+.++. |+.|.++|.|.+.++ .+.|- | ||+... ..+. ... ...| . -.......|..|.
T Consensus 18 ~~i~V~~~Ge~V~~~l~N~G~~p~~~M~Hn-------~-Vl~~~~-~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~l~ 88 (125)
T 3fsa_A 18 NAITVDKSCKQFTVNLSHPGNLPKNVMGHN-------W-VLSTAA-DMQGVVTDGMASGLDKDYLKPDDSRVIAHTKLIG 88 (125)
T ss_dssp SEEEECTTCSEEEEEEECCSSCCHHHHCBC-------C-EEEEHH-HHHHHHHHHHHHCGGGTTSCTTCTTCCEECCCBC
T ss_pred CEEEEecCCCEEEEEEEECCcccccccCce-------E-EEcccc-hHHHHHHHHHhcChhhccCCCCCccceeccceeC
Confidence 5567865 999999999987521 12354 3 444310 0000 000 0011 0 0223456777899
Q ss_pred CCcEEEEEEEec---CceeEEEEeecccccccccEEEEEEe
Q 008366 512 IGGWAVIRFRAN---NPGVWFMHCHFDVHLPWGLATTFIVE 549 (568)
Q Consensus 512 ~~g~~~irf~ad---npG~w~~HCHil~H~d~GM~~~~~V~ 549 (568)
||....+-|.+. .+|.|-|-|- -|. ||-+.+.|+
T Consensus 89 pGes~~vtf~~~~l~~~G~y~f~C~--gH~--~M~G~v~V~ 125 (125)
T 3fsa_A 89 SGEKDSVTFDVSKLKEGEQYMFFCA--AHA--AMKGTLTLK 125 (125)
T ss_dssp TTCEEEEEEEGGGC---CCEEEECS--SST--TCEEEEEEC
T ss_pred CCcEEEEEEeCcCcCCCccEEEEcC--CCC--CcEEEEEEC
Confidence 999999999998 8999999999 898 999999874
No 138
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=92.36 E-value=0.72 Score=40.94 Aligned_cols=74 Identities=15% Similarity=0.246 Sum_probs=54.9
Q ss_pred EEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEEecC
Q 008366 445 VKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFRANN 524 (568)
Q Consensus 445 ~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~adn 524 (568)
.+.++.|+.|++.+.|.+ ..|.|-+=.... -+.+.||....+.|.++.
T Consensus 94 ~l~VP~G~~Vr~~vTS~D----ViHsf~IP~lgi----------------------------k~da~PG~~n~~~~~~~k 141 (168)
T 3s8f_B 94 PIEVPQGAEIVFKITSPD----VIHGFHVEGTNI----------------------------NVEVLPGEVSTVRYTFKR 141 (168)
T ss_dssp SEEEETTSEEEEEEECSS----SCEEEEETTSSC----------------------------EEEECTTBCEEEEEECCS
T ss_pred EEEEeCCCeEEEEEecCC----ceEEEEECCCCe----------------------------EEEecCCceeEEEEEeCC
Confidence 457899999999999853 667665532211 123557777889999999
Q ss_pred ceeEEEEeecc-cccccccEEEEEEec
Q 008366 525 PGVWFMHCHFD-VHLPWGLATTFIVEN 550 (568)
Q Consensus 525 pG~w~~HCHil-~H~d~GM~~~~~V~~ 550 (568)
||.|.+.|... -+...+|...+.|++
T Consensus 142 pG~y~g~Cse~CG~~Hs~M~g~V~V~e 168 (168)
T 3s8f_B 142 PGEYRIICNQYCGLGHQNMFGTIVVKE 168 (168)
T ss_dssp CEEEEEECCSCCSTTGGGCEEEEEEEC
T ss_pred CEEEEEECCcCCCCCcCCCEEEEEEeC
Confidence 99999999864 345679999998863
No 139
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=81.11 E-value=4.2 Score=33.74 Aligned_cols=28 Identities=14% Similarity=0.234 Sum_probs=22.2
Q ss_pred ccccCCCCCeEEEEEEeCC--CCCceeEec
Q 008366 100 TQCPIRPGNSYTYKFRIIN--QEGTLWWHA 127 (568)
Q Consensus 100 ~~~~i~PG~~~~y~f~~~~--~~Gt~~YH~ 127 (568)
....|.||++.+|+...++ .+|+|..+.
T Consensus 70 ~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a 99 (120)
T 3isy_A 70 QNLTLESGETYDFSDVWKEVPEPGTYEVKV 99 (120)
T ss_dssp EEEEECTTCEEEEEEEESSCCCSEEEEEEE
T ss_pred ceEEECCCCEEEEEEEeCCCCCCccEEEEE
Confidence 3456999999999999962 579987764
No 140
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=80.70 E-value=11 Score=31.16 Aligned_cols=70 Identities=13% Similarity=0.169 Sum_probs=48.4
Q ss_pred EEEEEEeccCCCeEEEEEc-CceeEE--EEecCCCCC--------cEEEeEEEECCCceEEEEEEeCC--CCceeEEEEe
Q 008366 219 YLLRIINAALNNQLFFKIA-NHKFTV--VAVDAGYTD--------PYVTDVVVIAPGQTTDVLLKADQ--PVGSYYMAAR 285 (568)
Q Consensus 219 ~rlRliN~~~~~~~~~~i~-gh~~~v--ia~DG~~~~--------p~~~d~~~l~pg~r~dv~~~~~~--~~g~y~~~~~ 285 (568)
+.|.+.|.+... ..+.+. |+++.+ ...+|..+- ........|.||+...+-.+.++ .||.|.+.+-
T Consensus 22 ~~ltv~N~s~~~-v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~~~~~pG~Ytl~a~ 100 (120)
T 3isy_A 22 FNMSLKNQSERA-IEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWKEVPEPGTYEVKVT 100 (120)
T ss_dssp EEEEEEECSSSC-EEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEESSCCCSEEEEEEEE
T ss_pred EEEEEEcCCCCc-EEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeCCCCCCccEEEEEE
Confidence 456788988554 446664 665444 444575542 23457899999999999999884 5899999887
Q ss_pred eccC
Q 008366 286 AYAA 289 (568)
Q Consensus 286 ~~~~ 289 (568)
....
T Consensus 101 l~~~ 104 (120)
T 3isy_A 101 FKGR 104 (120)
T ss_dssp ECCE
T ss_pred EEee
Confidence 6543
No 141
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=72.46 E-value=12 Score=34.03 Aligned_cols=62 Identities=13% Similarity=0.142 Sum_probs=45.6
Q ss_pred eEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCCcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeecc
Q 008366 209 YKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYA 288 (568)
Q Consensus 209 ~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~ 288 (568)
..+.+..|+.+||++.+.. -.+.|.|.....++ ..-||..-.+.+.++ .+|.|+..|.-+-
T Consensus 41 n~l~lP~g~~V~~~lTS~D--ViHSF~IP~lgvK~----------------daiPGr~n~l~~~~~-~pG~y~g~CsE~C 101 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSNS--VMHSFFIPRLGSQI----------------YAMAGMQTRLHLIAN-EPGTYDGICAEIC 101 (205)
T ss_dssp SEEEEETTSCEEEEEEESS--SCEEEEEGGGTEEE----------------EECTTCCEEEEECCS-SSEEEEEEECSCC
T ss_pred ceEEEeCCCEEEEEEecCC--ceeeEEecccCcEE----------------EecCCceEEEEEEeC-CCeEEEEEccccc
Confidence 3689999999999998764 34456665443333 344788888888888 7999999998654
Q ss_pred C
Q 008366 289 A 289 (568)
Q Consensus 289 ~ 289 (568)
.
T Consensus 102 G 102 (205)
T 1cyx_A 102 G 102 (205)
T ss_dssp S
T ss_pred c
Confidence 3
No 142
>1cyx_A CYOA; electron transport; 2.30A {Escherichia coli} SCOP: b.6.1.2 PDB: 1cyw_A
Probab=68.38 E-value=14 Score=33.67 Aligned_cols=73 Identities=11% Similarity=-0.047 Sum_probs=51.8
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecCh-hhhhh
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI-SMLRA 134 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~-~~~~~ 134 (568)
..|.+..|+.|++.|++. +.-+++..-.+.. +.-+-||..-...|.+ +++|+|+..|.. -+...
T Consensus 41 n~l~lP~g~~V~~~lTS~-DViHSF~IP~lgv-------------K~daiPGr~n~l~~~~-~~pG~y~g~CsE~CG~~H 105 (205)
T 1cyx_A 41 NEIAFPANTPVYFKVTSN-SVMHSFFIPRLGS-------------QIYAMAGMQTRLHLIA-NEPGTYDGICAEICGPGH 105 (205)
T ss_dssp SEEEEETTSCEEEEEEES-SSCEEEEEGGGTE-------------EEEECTTCCEEEEECC-SSSEEEEEEECSCCSTTS
T ss_pred ceEEEeCCCEEEEEEecC-CceeeEEecccCc-------------EEEecCCceEEEEEEe-CCCeEEEEEcccccccch
Confidence 479999999999999987 3333333332211 1235689999999987 999999999964 23333
Q ss_pred -cceEEEEEe
Q 008366 135 -TVHGAFIIR 143 (568)
Q Consensus 135 -Gl~G~liV~ 143 (568)
.|.+.++|.
T Consensus 106 s~M~~~v~vv 115 (205)
T 1cyx_A 106 SGMKFKAIAT 115 (205)
T ss_dssp TTCCEEEEEE
T ss_pred hhceEEEEEE
Confidence 677888887
No 143
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=61.24 E-value=25 Score=29.39 Aligned_cols=72 Identities=15% Similarity=0.180 Sum_probs=40.6
Q ss_pred eEEEEEEEEEEeeccC---ceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCC---eeEEEcccc-----ccCCCCC
Q 008366 25 VVEHSFQVKNLTIGRL---CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYN---ITIHWHGIF-----QIRSIWA 93 (568)
Q Consensus 25 ~~~~~~~~~~~~~~~~---G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~---~~iH~HG~~-----~~~~~~~ 93 (568)
+..++.++....+.-. ...+.+|+| +|++.|....+ .+=||.=.+ .....
T Consensus 6 t~~I~V~V~~~y~~e~S~p~~~~y~faY-----------------~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G-- 66 (127)
T 2f1e_A 6 RYRVEVEVSPRFLAHQSTPDEGRYAFAY-----------------SIRIQNAGAVPARLVARHWQITDGNGRTEQVDG-- 66 (127)
T ss_dssp CCCEEEEEEEEECSTTCBGGGTBEEEEE-----------------EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEE--
T ss_pred ECCEEEEEEEEEchhhCCCcCCEEEEEE-----------------EEEEEeCCCCCEEEEeceEEEEeCCCCEEEEEC--
Confidence 3456666666654221 345667777 57778886654 345664222 12222
Q ss_pred CCCCCcccccCCCCCeEEEEEEe
Q 008366 94 DGPNMITQCPIRPGNSYTYKFRI 116 (568)
Q Consensus 94 DG~~~~~~~~i~PG~~~~y~f~~ 116 (568)
+||-| .|--|.||++|+|.=-.
T Consensus 67 ~GVVG-~qP~L~PGe~f~YtSg~ 88 (127)
T 2f1e_A 67 EGVVG-EQPWLRPGEAFHYTSGV 88 (127)
T ss_dssp SSBTT-BCCEECTTCEEEEEEEE
T ss_pred CCeec-CCCcCCCCCceEEeCCc
Confidence 55543 24457999988886543
No 144
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=55.60 E-value=25 Score=33.33 Aligned_cols=61 Identities=13% Similarity=0.237 Sum_probs=44.9
Q ss_pred eEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCCcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeecc
Q 008366 209 YKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYA 288 (568)
Q Consensus 209 ~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~ 288 (568)
..+.+..|+.+||++.+.. -.+.|.+.+...++ ..-||..-.+.+.++ .||.|...|.-+-
T Consensus 171 n~l~lP~g~~v~~~~tS~D--ViHsf~ip~l~~k~----------------da~PG~~n~~~~~~~-~~G~y~g~Cse~C 231 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGAD--VIHSWTVPAFGVKQ----------------DAVPGRLAQLWFRAE-REGIFFGQCSELC 231 (262)
T ss_dssp SCEEEETTSEEEEEEEESS--SCEEEEEGGGTEEE----------------EECBTCCEEEEEECC-SCEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEECc--ccceeeecccCceE----------------EecCCceeEEEEecC-CcEEEEEEChHhc
Confidence 4689999999999997654 34556665444333 334788888888888 7999999998643
No 145
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=55.37 E-value=21 Score=35.43 Aligned_cols=15 Identities=20% Similarity=0.328 Sum_probs=13.2
Q ss_pred ccCCCCCeEEEEEEe
Q 008366 102 CPIRPGNSYTYKFRI 116 (568)
Q Consensus 102 ~~i~PG~~~~y~f~~ 116 (568)
..|+||++.+.+|.+
T Consensus 95 ~~L~pG~Sve~~~dl 109 (343)
T 2x3c_A 95 QLLKAGQSLTVQAEV 109 (343)
T ss_dssp EEECTTCEEEEEEEC
T ss_pred EEeCCCCeEEEEEeh
Confidence 358999999999988
No 146
>2gsm_B Cytochrome C oxidase subunit 2; transmembrane protein complex, oxidoreductase; HET: DMU HEA TRD; 2.00A {Rhodobacter sphaeroides} SCOP: b.6.1.2 f.17.2.1 PDB: 3dtu_B* 3fye_B* 3fyi_B* 3omi_B* 3om3_B* 3oma_B* 3omn_B* 1m56_B* 1m57_B*
Probab=54.04 E-value=37 Score=32.19 Aligned_cols=75 Identities=13% Similarity=0.092 Sum_probs=51.9
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecCh-hhhhh
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI-SMLRA 134 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~-~~~~~ 134 (568)
..|.+..|+.|++.++.. +--++...-.+... .-+-||..-...|.+ +++|+|+..|.. -|...
T Consensus 171 n~l~lP~g~~v~~~~tS~-DViHsf~ip~l~~k-------------~da~PG~~n~~~~~~-~~~G~y~g~Cse~CG~~H 235 (262)
T 2gsm_B 171 TAMVVPVNKTVVVQVTGA-DVIHSWTVPAFGVK-------------QDAVPGRLAQLWFRA-EREGIFFGQCSELCGISH 235 (262)
T ss_dssp SCEEEETTSEEEEEEEES-SSCEEEEEGGGTEE-------------EEECBTCCEEEEEEC-CSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEEC-cccceeeecccCce-------------EEecCCceeEEEEec-CCcEEEEEEChHhcccCc
Confidence 469999999999999987 33344333322211 125579888889987 999999999874 23333
Q ss_pred -cceEEEEEecC
Q 008366 135 -TVHGAFIIRPK 145 (568)
Q Consensus 135 -Gl~G~liV~~~ 145 (568)
.|.+.+.|.++
T Consensus 236 ~~M~~~v~vv~~ 247 (262)
T 2gsm_B 236 AYMPITVKVVSE 247 (262)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 67777777654
No 147
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=52.67 E-value=41 Score=32.54 Aligned_cols=76 Identities=13% Similarity=0.098 Sum_probs=52.9
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecCh-hhhhh
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI-SMLRA 134 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~-~~~~~ 134 (568)
..|.+..|+.|++.+++. +--|+...-.+... .-+-||..-+..|.+ +++|+|+..|.. -|..+
T Consensus 189 N~lvlP~g~~V~~~ltS~-DViHsf~iP~lg~k-------------~daiPG~~n~~~~~~-~~~G~y~g~CsE~CG~~H 253 (298)
T 3hb3_B 189 NPVVVPVGKKVLVQVTAT-DVIHAWTIPAFAVK-------------QDAVPGRIAQLWFSV-DQEGVYFGQCSELCGINH 253 (298)
T ss_dssp SCEEEESSSEEEEEEEES-SSCEEEEEGGGTEE-------------EEECTTCCEEEEEEC-SSSEEEEECCCSCCSTTT
T ss_pred ceEEEEcCCEEEEEEEeC-CccceeeEcccCce-------------EEecCCceEEEEEEe-CCCEEEEEEcccccCcCc
Confidence 579999999999999996 33344333322211 125589888899997 999999999974 33333
Q ss_pred -cceEEEEEecCC
Q 008366 135 -TVHGAFIIRPKS 146 (568)
Q Consensus 135 -Gl~G~liV~~~~ 146 (568)
.|.+.+.|.+++
T Consensus 254 s~M~~~v~vvs~~ 266 (298)
T 3hb3_B 254 AYMPIVVKAVSQE 266 (298)
T ss_dssp TSCCEEEEEECHH
T ss_pred cCCeeEEEEEcHH
Confidence 677777776543
No 148
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=52.50 E-value=16 Score=36.07 Aligned_cols=69 Identities=14% Similarity=0.214 Sum_probs=41.0
Q ss_pred eeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCCeeE---EEccccccC---CCCCCCCC---------C-cccccCC
Q 008366 42 RQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYNITI---HWHGIFQIR---SIWADGPN---------M-ITQCPIR 105 (568)
Q Consensus 42 ~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~i---H~HG~~~~~---~~~~DG~~---------~-~~~~~i~ 105 (568)
+...+..-+=++||-+++ +.++++|+.+++..| -.-|+++.. ..+..+-| . ....||+
T Consensus 250 V~~~v~~A~Y~vpgR~l~------~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~ 323 (382)
T 1yew_A 250 VSVKVEDATYRVPGRAMR------MKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLA 323 (382)
T ss_dssp EEEEEEEEEEESSCSEEE------EEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBC
T ss_pred eEEEeeccEEecCCcEEE------EEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcC
Confidence 455666666678888776 458889998765432 122222211 11112222 1 2346899
Q ss_pred CCCeEEEEEEe
Q 008366 106 PGNSYTYKFRI 116 (568)
Q Consensus 106 PG~~~~y~f~~ 116 (568)
|||+.+.+..+
T Consensus 324 PGETr~~~v~a 334 (382)
T 1yew_A 324 PGETRTVDVTA 334 (382)
T ss_dssp TTCEEEEEEEE
T ss_pred CCceeEEEEEe
Confidence 99999999988
No 149
>3hb3_B Cytochrome C oxidase subunit 2; electron transfer, proton transfer, proton pumping, membrane protein, cell inner membrane, cell membrane, copper; HET: HEA LDA LMT; 2.25A {Paracoccus denitrificans} PDB: 1ar1_B* 3ehb_B* 1qle_B*
Probab=42.66 E-value=1e+02 Score=29.65 Aligned_cols=77 Identities=14% Similarity=0.179 Sum_probs=54.5
Q ss_pred CceEEEcccCCEEEEEEEeCCcCCCCCCceeecCCcEEEEEeCCCCCCCCCCCCCCcCCCCCceeeEEeCCCcEEEEEEE
Q 008366 442 TTSVKMLKFNSTVEMVLQNTALIAVESHPMHLHGYDFYVLAQGFGNYNASRDSKNFNLVNPQRRNTIAVPIGGWAVIRFR 521 (568)
Q Consensus 442 ~~~~~~~~~g~~ve~~l~N~~~~~~~~HP~HlHG~~F~Vv~~~~g~~~~~~~~~~~~~~~p~~rDTv~vp~~g~~~irf~ 521 (568)
..+.+.++.|+.|++.+.+.+ ..|.|.+=..... . .+-||-...+.|.
T Consensus 187 vdN~lvlP~g~~V~~~ltS~D----ViHsf~iP~lg~k-------------------------~---daiPG~~n~~~~~ 234 (298)
T 3hb3_B 187 TDNPVVVPVGKKVLVQVTATD----VIHAWTIPAFAVK-------------------------Q---DAVPGRIAQLWFS 234 (298)
T ss_dssp BSSCEEEESSSEEEEEEEESS----SCEEEEEGGGTEE-------------------------E---EECTTCCEEEEEE
T ss_pred ccceEEEEcCCEEEEEEEeCC----ccceeeEcccCce-------------------------E---EecCCceEEEEEE
Confidence 336778999999999999753 6777665432211 2 2346667788999
Q ss_pred ecCceeEEEEeecccccc-cccEEEEEEec
Q 008366 522 ANNPGVWFMHCHFDVHLP-WGLATTFIVEN 550 (568)
Q Consensus 522 adnpG~w~~HCHil~H~d-~GM~~~~~V~~ 550 (568)
++.||.|...|.-.-... ..|-..++|.+
T Consensus 235 ~~~~G~y~g~CsE~CG~~Hs~M~~~v~vvs 264 (298)
T 3hb3_B 235 VDQEGVYFGQCSELCGINHAYMPIVVKAVS 264 (298)
T ss_dssp CSSSEEEEECCCSCCSTTTTSCCEEEEEEC
T ss_pred eCCCEEEEEEcccccCcCccCCeeEEEEEc
Confidence 999999999999766443 55666666653
No 150
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=41.60 E-value=39 Score=27.82 Aligned_cols=72 Identities=24% Similarity=0.318 Sum_probs=44.2
Q ss_pred ECCCCCC------CeEEEecC-CEEEEEEEeCCCCCee--EEEccccccCCCCCC-----C----CCCcccccCCCCCeE
Q 008366 49 VNGSLPG------PTIRVQEG-DTLIVHVSNESPYNIT--IHWHGIFQIRSIWAD-----G----PNMITQCPIRPGNSY 110 (568)
Q Consensus 49 ~NG~~pG------P~i~v~~G-d~v~i~l~N~l~~~~~--iH~HG~~~~~~~~~D-----G----~~~~~~~~i~PG~~~ 110 (568)
.+..+|| -.|.+++| +++.|+++|..++|+- -|+|=.+..+.---| | .|.-|.....||++.
T Consensus 4 ~~~miPGei~~~~g~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k 83 (126)
T 4ubp_B 4 NNYIVPGEYRVAEGEIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEM 83 (126)
T ss_dssp -CCCCTTCEECCSSEEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEE
T ss_pred CCCCCCCeEEeCCCCEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeE
Confidence 4455666 25777787 5899999999998865 466655544311112 1 222244567888888
Q ss_pred EEEEEeCCCCCc
Q 008366 111 TYKFRIINQEGT 122 (568)
Q Consensus 111 ~y~f~~~~~~Gt 122 (568)
+.+.. .-.|.
T Consensus 84 ~V~LV--~~~G~ 93 (126)
T 4ubp_B 84 EVELT--ELGGN 93 (126)
T ss_dssp EEEEE--ECCTT
T ss_pred EEEEE--EccCC
Confidence 88775 34444
No 151
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=41.60 E-value=39 Score=27.82 Aligned_cols=72 Identities=24% Similarity=0.318 Sum_probs=44.2
Q ss_pred ECCCCCC------CeEEEecC-CEEEEEEEeCCCCCee--EEEccccccCCCCCC-----C----CCCcccccCCCCCeE
Q 008366 49 VNGSLPG------PTIRVQEG-DTLIVHVSNESPYNIT--IHWHGIFQIRSIWAD-----G----PNMITQCPIRPGNSY 110 (568)
Q Consensus 49 ~NG~~pG------P~i~v~~G-d~v~i~l~N~l~~~~~--iH~HG~~~~~~~~~D-----G----~~~~~~~~i~PG~~~ 110 (568)
.+..+|| -.|.+++| +++.|+++|..++|+- -|+|=.+..+.---| | .|.-|.....||++.
T Consensus 4 ~~~miPGei~~~~g~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k 83 (126)
T 4ac7_B 4 NNYIVPGEYRVAEGEIEINAGREKTTIRVSNTGDRPIQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEM 83 (126)
T ss_dssp -CCCCTTCEECCSSEEETTTTSCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEE
T ss_pred CCCCCCCeEEeCCCCEEeCCCCcEEEEEEEeCCCCCEEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeE
Confidence 4455666 25777787 5899999999998865 466655544311112 1 222244567888888
Q ss_pred EEEEEeCCCCCc
Q 008366 111 TYKFRIINQEGT 122 (568)
Q Consensus 111 ~y~f~~~~~~Gt 122 (568)
+.+.. .-.|.
T Consensus 84 ~V~LV--~~~G~ 93 (126)
T 4ac7_B 84 EVELT--ELGGN 93 (126)
T ss_dssp EEEEE--ECCTT
T ss_pred EEEEE--EccCC
Confidence 88775 34444
No 152
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=41.41 E-value=47 Score=30.70 Aligned_cols=61 Identities=13% Similarity=0.193 Sum_probs=43.8
Q ss_pred eEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCCcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeecc
Q 008366 209 YKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYA 288 (568)
Q Consensus 209 ~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~ 288 (568)
..+.+..|+.+|+.+..+. -.|+|.+.....++ | .-||..-.+.+.++ .||.|+..|.-+-
T Consensus 140 n~lvlP~~~~Vr~~vtS~D--ViHsf~vP~lg~K~-------------D---aiPGr~n~~~~~~~-~~G~y~g~Cse~C 200 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSED--VLHSWAVPSLGLKT-------------D---AIPGRLNQTTLMSS-RPGLYYGQCSEIC 200 (227)
T ss_dssp SCEEEETTSCEEEEEEESS--SCEEEEEGGGTEEE-------------E---ECTTCCEEEEECCS-SCEEEEECCCSCC
T ss_pred ceEEEecCCEEEEEEEeCc--ccceeeecccCcEE-------------E---ecCCceEEEEEecC-CcEEEEEEehhhc
Confidence 4789999999999997644 34455555433333 3 34788888888888 7999999998543
No 153
>2c34_A ICP, inhibitor of cysteine peptidases; chagasin, immunoglobulin fold; NMR {Leishmania mexicana} SCOP: b.1.26.1
Probab=38.88 E-value=1.3e+02 Score=24.41 Aligned_cols=68 Identities=10% Similarity=0.097 Sum_probs=39.3
Q ss_pred CCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCC----Cc----ccccCCCCCeEEEEEEeCCCCCce
Q 008366 55 GPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPN----MI----TQCPIRPGNSYTYKFRIINQEGTL 123 (568)
Q Consensus 55 GP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~----~~----~~~~i~PG~~~~y~f~~~~~~Gt~ 123 (568)
|-+|+++.||++.|.|.-+-.....-..........--.+|.. .. ..-.+..|....+.|++ ..+|+.
T Consensus 14 ~~~i~~~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~~l~~~gl~~~s~y~~~~~~~~~vG~gG~~~~~f~a-~~~G~~ 89 (116)
T 2c34_A 14 DKWVDTHVGKTTEIHLKGNPTTGYMWTRVGFVGKDVLSDEILEVVCKYTPTPSSTPMVGVGGIYVVLVKP-RKRGHH 89 (116)
T ss_dssp CCCEEECSSCCEEEEEECCTTSSCEEEETTCTTSSCCCCSSEEEEEEEECCCCSSSSSCCCCEEEEEEEE-CSSSSE
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCcEEEEecCCCcccccccccEEEEeEEeCCCCCCCcCCCceEEEEEEE-eCCceE
Confidence 4589999999999999876544444444331100000001110 00 01136678899999998 888864
No 154
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=37.93 E-value=31 Score=28.75 Aligned_cols=72 Identities=21% Similarity=0.182 Sum_probs=40.1
Q ss_pred eEEEEEEEEEEeecc--C-ceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCC---eeEEEcccc-----ccCCCCC
Q 008366 25 VVEHSFQVKNLTIGR--L-CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYN---ITIHWHGIF-----QIRSIWA 93 (568)
Q Consensus 25 ~~~~~~~~~~~~~~~--~-G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~---~~iH~HG~~-----~~~~~~~ 93 (568)
+..+++++....+.- + ...+.+|+| +|++.|....+ .+=||.=.+ .....
T Consensus 5 t~~I~V~V~~~y~~e~S~p~~~~y~faY-----------------~I~I~N~~~~~vQL~sRhW~Itd~~g~~~eV~G-- 65 (126)
T 1xvs_A 5 LPCIKIQVQTRYIEEQSNPEYQRFVFAY-----------------LITIKNLSSQTVQLMSRRWLITDADGKQTVVEG-- 65 (126)
T ss_dssp CCCEEEEEEEEECGGGCBGGGTBEEEEE-----------------EEEEEECSSSCEEEEEEEEEEEETTCCEEEEEE--
T ss_pred cCCEEEEEEEEEchhcCCCcCCEEEEEE-----------------EEEEEECCCCCEEEEecEEEEEeCCCCEEEEEC--
Confidence 344666666665422 1 445667777 57777876654 345664222 11222
Q ss_pred CCCCCcccccCCCCCeEEEEEEe
Q 008366 94 DGPNMITQCPIRPGNSYTYKFRI 116 (568)
Q Consensus 94 DG~~~~~~~~i~PG~~~~y~f~~ 116 (568)
+||-| .|--|.||++|+|.=-.
T Consensus 66 ~GVVG-~qP~L~PGe~f~YtSg~ 87 (126)
T 1xvs_A 66 DGVVG-EQPRIKANDEYTYSSGT 87 (126)
T ss_dssp ESBTT-BCCEECTTCEEEEEEEE
T ss_pred CceEc-CCCcCCCCCceEEeCCc
Confidence 45543 24457999988876543
No 155
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=37.53 E-value=38 Score=33.01 Aligned_cols=61 Identities=15% Similarity=0.194 Sum_probs=43.8
Q ss_pred eEEEEEcCcEEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCCcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeecc
Q 008366 209 YKLKVEKGKTYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAYA 288 (568)
Q Consensus 209 ~~l~v~~G~~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~~ 288 (568)
..+.+..|+.+||++... .-.|+|.+.+...++ ..-||..-.+.+.++ .+|.|+..|..+-
T Consensus 151 n~l~lP~g~~V~~~lTS~--DViHsf~IP~lg~k~----------------DaiPGr~n~~~~~~~-~~G~y~g~CsE~C 211 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN--SVMNSFFIPRLGSQI----------------YAMAGMQTRLHLIAN-EPGTYDGISASYS 211 (315)
T ss_dssp SBCCCCSSSEEEEEECBS--SSCEEEEEGGGTEEE----------------EECBTSCEEEEEECC-SCBCCEEBCCSCC
T ss_pred ceEEEeCCCEEEEEEEeC--CccceeeecccCcEE----------------eecCCcceeeEEecC-CCeEEEEeccccc
Confidence 467899999999999644 334556665443333 344788888888888 7999999998543
No 156
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=36.47 E-value=1.1e+02 Score=23.85 Aligned_cols=69 Identities=12% Similarity=0.079 Sum_probs=38.4
Q ss_pred EEEcCcEEEEEEEeccCCCeEEEEEcC--ceeEEEEecCCCCCcEEEeEEEECCCceEEEEEEeCC--CCceeEEEEee
Q 008366 212 KVEKGKTYLLRIINAALNNQLFFKIAN--HKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQ--PVGSYYMAARA 286 (568)
Q Consensus 212 ~v~~G~~~rlRliN~~~~~~~~~~i~g--h~~~via~DG~~~~p~~~d~~~l~pg~r~dv~~~~~~--~~g~y~~~~~~ 286 (568)
.-+|||++++|++-....... ..+ ..+++...+|..+.. -.........++..+..++ ..|.|.|++..
T Consensus 12 iYrPGetV~~~~~~~~~~~~p---~~~~~~~v~l~dp~g~~v~~---~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~ 84 (102)
T 2p9r_A 12 IYKPGQTVKFRVVSMDENFHP---LNELIPLVYIQDPKGNRIAQ---WQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQK 84 (102)
T ss_dssp EECTTCEEEEEEEEECGGGCB---CCCEEEEEEEECTTSCEEEE---EEEEECBTTEEEEEEECCSSCCCEEEEEEEEC
T ss_pred ccCCCCEEEEEEEEECCCCcC---CCCCceEEEEECCCCCEEEE---EEeecCCCCEEEEEEECCCCCCCeeEEEEEEE
Confidence 468999999997654322111 011 135555555543211 1122233456677777764 35999998775
No 157
>1v54_B Cytochrome C oxidase polypeptide II; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: b.6.1.2 f.17.2.1 PDB: 1oco_B* 1occ_B* 1ocz_B* 1ocr_B* 1v55_B* 2dyr_B* 2dys_B* 2eij_B* 2eik_B* 2eil_B* 2eim_B* 2ein_B* 2occ_B* 2y69_B* 2ybb_M* 2zxw_B* 3abk_B* 3abl_B* 3abm_B* 3ag1_B* ...
Probab=36.01 E-value=57 Score=30.12 Aligned_cols=75 Identities=12% Similarity=0.004 Sum_probs=50.6
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecCh-hhhhh
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI-SMLRA 134 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~-~~~~~ 134 (568)
..+.+..|..|++.++.. +--|+...-.+... +| .-||..-+..|.+ +++|+|+..|.. -|..+
T Consensus 140 n~lvlP~~~~Vr~~vtS~-DViHsf~vP~lg~K----~D---------aiPGr~n~~~~~~-~~~G~y~g~Cse~CG~~H 204 (227)
T 1v54_B 140 NRVVLPMEMTIRMLVSSE-DVLHSWAVPSLGLK----TD---------AIPGRLNQTTLMS-SRPGLYYGQCSEICGSNH 204 (227)
T ss_dssp SCEEEETTSCEEEEEEES-SSCEEEEEGGGTEE----EE---------ECTTCCEEEEECC-SSCEEEEECCCSCCSTTG
T ss_pred ceEEEecCCEEEEEEEeC-cccceeeecccCcE----EE---------ecCCceEEEEEec-CCcEEEEEEehhhccccc
Confidence 679999999999999986 33444444333211 13 4578888888987 999999999864 23322
Q ss_pred -cceEEEEEecC
Q 008366 135 -TVHGAFIIRPK 145 (568)
Q Consensus 135 -Gl~G~liV~~~ 145 (568)
-|-+.+.|.++
T Consensus 205 s~M~~~v~vv~~ 216 (227)
T 1v54_B 205 SFMPIVLELVPL 216 (227)
T ss_dssp GGCCEEEEEECH
T ss_pred ccCeEEEEEEcH
Confidence 45566666543
No 158
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=34.75 E-value=80 Score=25.58 Aligned_cols=46 Identities=17% Similarity=0.356 Sum_probs=30.6
Q ss_pred EEEEEEEeccCCCe-EEEEEcCc-eeEEEEecCCCCCcEEEeEEEECCCceEEEEEEe
Q 008366 218 TYLLRIINAALNNQ-LFFKIANH-KFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKA 273 (568)
Q Consensus 218 ~~rlRliN~~~~~~-~~~~i~gh-~~~via~DG~~~~p~~~d~~~l~pg~r~dv~~~~ 273 (568)
.|+|+|+|.+...+ +.+.+.|. .+++. | + ..+.|.+|+..++-+..
T Consensus 34 ~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~---g----~---~~i~v~~g~~~~~~v~v 81 (118)
T 2r39_A 34 TYTLKVINKTQQVQEYNLDVKGLNDVSWY---G----K---QTIQVEPGEVLNLPMSL 81 (118)
T ss_dssp EEEEEEEECSSSCEEEEEEEESCSSCEEE---S----C---CEEEECTTCEEEEEEEE
T ss_pred EEEEEEEECCCCCEEEEEEEeCCcccEEe---C----C---CcEEECCCCEEEEEEEE
Confidence 58999999997664 56666663 24432 2 1 14999999976665544
No 159
>2cio_B Inhibitor of cysteine peptidase; hydrolase/inhibitor, complex hydrolase/inhibitor, ICP, cysteine protease, allergen, protease, thiol protease; 1.5A {Trypanosoma brucei}
Probab=33.91 E-value=1.5e+02 Score=24.16 Aligned_cols=66 Identities=17% Similarity=0.238 Sum_probs=36.9
Q ss_pred CCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCc--------cc--------ccCCCCCeEEEEEEeCC
Q 008366 55 GPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMI--------TQ--------CPIRPGNSYTYKFRIIN 118 (568)
Q Consensus 55 GP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~--------~~--------~~i~PG~~~~y~f~~~~ 118 (568)
|-+|.++.||++.|.|.=+-....+-...+...... .||...+ +. ..+..|....+.|++ .
T Consensus 12 ~~ti~l~~Ge~~~I~L~~NPtTGY~W~~~~~~~~~l--~~~~~~v~~~y~~~~~~~~~~~~~~~~vG~gG~~~~~fka-~ 88 (121)
T 2cio_B 12 NKTIRMVIGETFTIELESNPTTGYTWLRSGLAGTEL--SDCTFAIQSKFNNRAPHDNHKNHRRLLVGAGGTMVLEVKA-L 88 (121)
T ss_pred CcEEEEcCCCEEEEEeCCCCCCCeEEEEecCccccC--CCccEEEeeeEEcCCCCcccccccccEeCCCceEEEEEEE-e
Confidence 356999999999999975544444433333110000 1221000 00 135667788888888 7
Q ss_pred CCCce
Q 008366 119 QEGTL 123 (568)
Q Consensus 119 ~~Gt~ 123 (568)
.+|+.
T Consensus 89 ~~G~~ 93 (121)
T 2cio_B 89 KAGKH 93 (121)
T ss_pred cCceE
Confidence 77764
No 160
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=33.01 E-value=69 Score=25.43 Aligned_cols=53 Identities=11% Similarity=0.148 Sum_probs=33.4
Q ss_pred EEEEEEEeCCCCC---eeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeC-CCCCce
Q 008366 65 TLIVHVSNESPYN---ITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRII-NQEGTL 123 (568)
Q Consensus 65 ~v~i~l~N~l~~~---~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~-~~~Gt~ 123 (568)
.+.|+|+|.|+.+ ..++..|.-.. .+ -......|.||++..+++... ..+|..
T Consensus 23 ~v~vsf~NPL~~~L~~c~~~vEG~GL~-----~~-~~~~~~~v~pg~~~~~~~~~~P~~~G~~ 79 (102)
T 2xzz_A 23 EVQIVFKNPLPVTLTNVVFRLEGSGLQ-----RP-KILNVGDIGGNETVTLRQSFVPVRPGPR 79 (102)
T ss_dssp EEEEEEECCSSSCBCSEEEEEEETTTE-----EE-EEEEECCBCTTCEEEEEEEECCCSCSSC
T ss_pred EEEEEEECCCCCcccCEEEEEECCCCC-----cc-eEEEcCcCCCCCEEEEEEEEecCcccce
Confidence 5789999999865 34565554221 11 111123599999999988874 556653
No 161
>2h7w_A Chagasin; beta-strands, immunoglobulin-fold, hydrolase inhibitor; 1.70A {Trypanosoma cruzi} SCOP: b.1.26.1 PDB: 2nnr_A 2oul_B 3cbj_B 3cbk_B 3e1z_A 2fo8_A 2nqd_A*
Probab=32.71 E-value=1.5e+02 Score=24.73 Aligned_cols=65 Identities=12% Similarity=0.209 Sum_probs=37.1
Q ss_pred CCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCC--------CCcccccCCCCCeEEEEEEeCCCCCce
Q 008366 55 GPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGP--------NMITQCPIRPGNSYTYKFRIINQEGTL 123 (568)
Q Consensus 55 GP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~--------~~~~~~~i~PG~~~~y~f~~~~~~Gt~ 123 (568)
|-+|+++.||++.|.|.-+-....+-....... ....|++ |. ....+..|....+.|++ ..+|+.
T Consensus 32 ~~~I~v~~Ge~~~I~L~~NPTTGY~W~~~~~~~--~~L~~~~~~v~~~y~p~-~~~~vGagG~~~w~f~A-~~~G~~ 104 (131)
T 2h7w_A 32 GATLTVAVGELVEIQLPSNPTTGFAWYFEGGTK--ESPNESMFTVENKYFPP-DSKLLGAGGTEHFHVTV-KAAGTH 104 (131)
T ss_dssp TCEEEECTTCEEEEEEEECGGGSCEEEBTTTBS--SCSCTTTEEEEEEEECC-TTCCTTCCEEEEEEEEE-CSSEEE
T ss_pred CCEEEEeCCCEEEEEeCCCCCCCeEEEEecCCC--ccccccceeecceeeeC-CCCCcCCCcEEEEEEEE-ccCceE
Confidence 568999999999999986633333322222111 0011221 10 01135667888888888 777754
No 162
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=32.34 E-value=45 Score=28.26 Aligned_cols=71 Identities=20% Similarity=0.166 Sum_probs=39.5
Q ss_pred EEEEEEEEEEeecc--C-ceeeeEEEECCCCCCCeEEEecCCEEEEEEEeCCCCC---eeEEEccccc-----cCCCCCC
Q 008366 26 VEHSFQVKNLTIGR--L-CRQQTITAVNGSLPGPTIRVQEGDTLIVHVSNESPYN---ITIHWHGIFQ-----IRSIWAD 94 (568)
Q Consensus 26 ~~~~~~~~~~~~~~--~-G~~~~~~~~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~---~~iH~HG~~~-----~~~~~~D 94 (568)
..+++++....+.- + ...+.+|+| +|++.|....+ .+=||.=.+. ...+ +
T Consensus 11 ~gI~V~V~~~y~~e~S~p~~~~y~FaY-----------------~ItI~N~~~~~vQL~sRhW~ItD~~G~~~eV~G--~ 71 (139)
T 1xq4_A 11 YDLTVSVTPRYVPEQSDPSQQQYVFAY-----------------TVRITNTGSHPAQVISRHWIITDGEERVQEVRG--L 71 (139)
T ss_dssp SCEEEEEEEEECGGGCBGGGTBEEEEE-----------------EEEEEECSSSCEEEEEEEEEEECTTSCEEEEEE--E
T ss_pred CCEEEEEEEEEchhhCCCCCCEEEEEE-----------------EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEC--C
Confidence 34666666665422 1 345667777 56777876554 3456642221 1122 4
Q ss_pred CCCCcccccCCCCCeEEEEEEe
Q 008366 95 GPNMITQCPIRPGNSYTYKFRI 116 (568)
Q Consensus 95 G~~~~~~~~i~PG~~~~y~f~~ 116 (568)
||-| .|--|.||++|+|.=-.
T Consensus 72 GVVG-eqPvL~PGe~F~YtSg~ 92 (139)
T 1xq4_A 72 GVVG-QQPLLAPGETFEYTSGC 92 (139)
T ss_dssp SSSS-CCCEECTTCEEEEEEEE
T ss_pred Ceec-CCCcCCCCCceEEcCCc
Confidence 5543 24457999988886543
No 163
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=30.03 E-value=40 Score=28.35 Aligned_cols=47 Identities=19% Similarity=0.137 Sum_probs=25.9
Q ss_pred EEEEEeCCCCC---eeEEEcccc-----ccCCCCCCCCCCcccccCCCCCeEEEEEEe
Q 008366 67 IVHVSNESPYN---ITIHWHGIF-----QIRSIWADGPNMITQCPIRPGNSYTYKFRI 116 (568)
Q Consensus 67 ~i~l~N~l~~~---~~iH~HG~~-----~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~ 116 (568)
+|++.|....+ .+=||.=.+ ..... +||-| .|--|.||++|+|.=-.
T Consensus 33 ~ItI~N~~~~~vQL~sRhW~Itd~~g~~~eV~G--~GVVG-eqP~L~PGe~F~YtSg~ 87 (134)
T 1tza_A 33 TITIINLGEQAAKLETRHWIITDANGKTSEVQG--AGVVG-ETPTIPPNTAYQYTSGT 87 (134)
T ss_dssp EEEEEECSSSCEEEEEEEEEEEETTSCEEEEEE--ESBTT-BCCEECTTEEEEEEEEE
T ss_pred EEEEEeCCCCCEEEEecEEEEEeCCCCEEEEEc--CceEc-CCCcCCCCCceEEcCCc
Confidence 56777876554 344664222 11222 45543 24457999988886543
No 164
>1nep_A EPV20, BNPC2, epididymal secretory protein E1; niemann-PICK C2, LDL, cholesterol, lipid bindin; HET: NAG; 1.70A {Bos taurus} SCOP: b.1.18.7 PDB: 2hka_A*
Probab=29.60 E-value=1e+02 Score=25.52 Aligned_cols=62 Identities=21% Similarity=0.294 Sum_probs=34.7
Q ss_pred CeEEEecCCEEEEEEE---eCCCCCeeEEE----cccccc-CCCCCCCCCCcccccCCCCCeEEEEEEeC
Q 008366 56 PTIRVQEGDTLIVHVS---NESPYNITIHW----HGIFQI-RSIWADGPNMITQCPIRPGNSYTYKFRII 117 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~---N~l~~~~~iH~----HG~~~~-~~~~~DG~~~~~~~~i~PG~~~~y~f~~~ 117 (568)
+.=.+..|+.+.|.+. |.......... .|+... +..-.|+=.....|||.+|+.++|.+..+
T Consensus 26 ~PC~l~rG~~~~i~i~f~~~~~~~~~~~~v~~~~~gv~vp~~~~~~daC~~g~~CPl~~G~~~~y~~~lp 95 (130)
T 1nep_A 26 QPCKLHRGQSYSVNVTFTSNTQSQSSKAVVHGIVMGIPVPFPIPESDGCKSGIRCPIEKDKTYNYVNKLP 95 (130)
T ss_dssp SSEEEETTCEEEEEEEEEESSCBSCCEEEEEEEETTEEEECCCSCCBGGGTTCCSSBCTTCEEEEEEEEE
T ss_pred CCCEEEcCCeEEEEEEEEcccccceEEEEEEEEECCEEeeccCCCCCcccCCCcCcccCCcEEEEEEEeE
Confidence 4556788888777776 22222222222 233332 11112432122479999999999998873
No 165
>2wtp_A ORF131 protein, CZCE; metal binding protein, heavy metal, copper binding; HET: TRS; 1.50A {Ralstonia metallidurans CH34} PDB: 2wto_A*
Probab=28.59 E-value=21 Score=29.81 Aligned_cols=23 Identities=17% Similarity=0.229 Sum_probs=18.4
Q ss_pred EEEEEcCcEEEEEEEeccCCCeE
Q 008366 210 KLKVEKGKTYLLRIINAALNNQL 232 (568)
Q Consensus 210 ~l~v~~G~~~rlRliN~~~~~~~ 232 (568)
.|+|+.||++||.+.|-+..+.+
T Consensus 72 ~InV~~GETVrF~v~nkt~~W~F 94 (131)
T 2wtp_A 72 YVNVDSGETVAFRAGEKIVAWTF 94 (131)
T ss_dssp EEEEETTCEEEEEETTEEEEEEE
T ss_pred EEEecCCCEEEEEeCCcEEEEEE
Confidence 49999999999999887744433
No 166
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=26.77 E-value=70 Score=26.08 Aligned_cols=33 Identities=21% Similarity=0.378 Sum_probs=28.3
Q ss_pred EEEecCceeEEEEeecccccccccEEEE-EEecC
Q 008366 519 RFRANNPGVWFMHCHFDVHLPWGLATTF-IVENG 551 (568)
Q Consensus 519 rf~adnpG~w~~HCHil~H~d~GM~~~~-~V~~~ 551 (568)
.+..+.+|..-|=|=...|=..||-+.| .|...
T Consensus 73 ~v~l~~~G~~yFic~~~~HC~~Gmkl~In~V~~~ 106 (116)
T 1x9u_A 73 KIMLNTTGPQYYICTVGDHCRVGQKLSINVVGAG 106 (116)
T ss_dssp EEECCSCEEEEEECCSTTTTTTTCEEEEEEECC-
T ss_pred EEEECCCCCEEEECCCCCccccCCEEEEEEECCC
Confidence 4567889999999999999999999999 88753
No 167
>2f1e_A Protein APAG; APAG protein, xanthomonas axonopodis PV.citri, structural genomics, unknown function; NMR {Xanthomonas axonopodis PV}
Probab=26.15 E-value=50 Score=27.49 Aligned_cols=50 Identities=16% Similarity=0.261 Sum_probs=29.8
Q ss_pred EEEEEEEeccCCCeEEEEEcCceeEEEEecCCCC----CcEEEeEEEECCCceEEEE
Q 008366 218 TYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT----DPYVTDVVVIAPGQTTDVL 270 (568)
Q Consensus 218 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~----~p~~~d~~~l~pg~r~dv~ 270 (568)
.|++||.|.+... ..|-...|.+.+.||... ..+...+=.|.|||.+...
T Consensus 32 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Yt 85 (127)
T 2f1e_A 32 AYSIRIQNAGAVP---ARLVARHWQITDGNGRTEQVDGEGVVGEQPWLRPGEAFHYT 85 (127)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEESSBTTBCCEECTTCEEEEE
T ss_pred EEEEEEEeCCCCC---EEEEeceEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEe
Confidence 4789999998542 345556676666665432 1122234468888866543
No 168
>1xwv_A DER F II; beta sheets, allergen; HET: PE3 XPE; 1.83A {Dermatophagoides farinae} SCOP: b.1.18.7 PDB: 1ahk_A 1ahm_A 1wrf_A 2f08_A* 1a9v_A 1ktj_A
Probab=26.05 E-value=1.3e+02 Score=24.85 Aligned_cols=61 Identities=18% Similarity=0.343 Sum_probs=34.4
Q ss_pred CCeEEEecCCEEEEEEE---eCCCCC--eeEE--EccccccC-CCCCCCCCCcccccCCCCCeEEEEEEe
Q 008366 55 GPTIRVQEGDTLIVHVS---NESPYN--ITIH--WHGIFQIR-SIWADGPNMITQCPIRPGNSYTYKFRI 116 (568)
Q Consensus 55 GP~i~v~~Gd~v~i~l~---N~l~~~--~~iH--~HG~~~~~-~~~~DG~~~~~~~~i~PG~~~~y~f~~ 116 (568)
.+.=.+..|+.+.|.+. |..... +.+| ..|+.... ..-.|+=.+ ..|||.+|+.++|.+..
T Consensus 24 ~~pC~l~rG~~~~i~~~f~~~~~~~~l~~~v~~~~~g~~ip~p~~~~daC~~-~~CPl~~G~~~~y~~~~ 92 (129)
T 1xwv_A 24 SDPCIIHRGKPFTLEALFDANQNTKTAKIEIKASLDGLEIDVPGIDTNACHF-MKCPLVKGQQYDAKYTW 92 (129)
T ss_dssp TSCEEEETTSEEEEEEEEECCSCBSCCEEEEEEEETTEEECCCSCCCBGGGT-SCSSBCTTCEEEEEEEE
T ss_pred CCCCEEeCCCeEEEEEEEECCCccceEEEEEEEEEcCEEeecCCCCCCccCC-ccCcccCCEEEEEEEEe
Confidence 34556788988777776 221222 2233 23443321 111233212 57999999999999776
No 169
>1xvs_A Protein APAG; MCSG APC26324, midwest center for structural genomics, structure initiative, PSI, structural genomics, unknown FUN; 2.01A {Vibrio cholerae} SCOP: b.1.23.1
Probab=26.03 E-value=43 Score=27.82 Aligned_cols=50 Identities=16% Similarity=0.214 Sum_probs=30.5
Q ss_pred EEEEEEEeccCCCeEEEEEcCceeEEEEecCCCCC----cEEEeEEEECCCceEEEE
Q 008366 218 TYLLRIINAALNNQLFFKIANHKFTVVAVDAGYTD----PYVTDVVVIAPGQTTDVL 270 (568)
Q Consensus 218 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~~----p~~~d~~~l~pg~r~dv~ 270 (568)
.|++||.|.+... ..|-...|.+...||...+ .+...+=.|.|||.+...
T Consensus 31 aY~I~I~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVG~qP~L~PGe~f~Yt 84 (126)
T 1xvs_A 31 AYLITIKNLSSQT---VQLMSRRWLITDADGKQTVVEGDGVVGEQPRIKANDEYTYS 84 (126)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTCCEEEEEEESBTTBCCEECTTCEEEEE
T ss_pred EEEEEEEECCCCC---EEEEecEEEEEeCCCCEEEEECCceEcCCCcCCCCCceEEe
Confidence 4789999998542 4555566777766664320 111234478888876543
No 170
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=25.88 E-value=1.2e+02 Score=30.13 Aligned_cols=50 Identities=22% Similarity=0.252 Sum_probs=0.0
Q ss_pred EEEEEEEeCCCCCee---EEEccccccCCCC-------------CCCCCCcccccCCCCCeEEEEEEe
Q 008366 65 TLIVHVSNESPYNIT---IHWHGIFQIRSIW-------------ADGPNMITQCPIRPGNSYTYKFRI 116 (568)
Q Consensus 65 ~v~i~l~N~l~~~~~---iH~HG~~~~~~~~-------------~DG~~~~~~~~i~PG~~~~y~f~~ 116 (568)
++.++++|+.+++.. +-.-|+.+..... .+|.. ... ||+|||+.+.+..+
T Consensus 301 ~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a 366 (419)
T 3rfr_A 301 TINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKI 366 (419)
T ss_dssp EEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEE
T ss_pred EEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEe
No 171
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=23.43 E-value=1.7e+02 Score=23.06 Aligned_cols=59 Identities=24% Similarity=0.210 Sum_probs=37.8
Q ss_pred eEEEecC-CEEEEEEEeCCCCCee--EEEccccccCCCCCC-----C----CCCcccccCCCCCeEEEEEE
Q 008366 57 TIRVQEG-DTLIVHVSNESPYNIT--IHWHGIFQIRSIWAD-----G----PNMITQCPIRPGNSYTYKFR 115 (568)
Q Consensus 57 ~i~v~~G-d~v~i~l~N~l~~~~~--iH~HG~~~~~~~~~D-----G----~~~~~~~~i~PG~~~~y~f~ 115 (568)
.|.+++| +++.|++.|..++|+- -|+|=.+..+.---| | .|.-|.....||++.+.+..
T Consensus 12 ~I~lN~gr~~~~l~V~NtGDRPIQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV 82 (101)
T 4ep8_B 12 QIALNTGRATCRVVVENHGDRPIQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELV 82 (101)
T ss_dssp EEECSTTCCEEEEEEEECSSSCEEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEE
T ss_pred cEEEcCCCCEEEEEEEeCCCcceEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEE
Confidence 4777777 5799999999998865 466655543311112 1 22224456788888888875
No 172
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=23.33 E-value=1.2e+02 Score=28.57 Aligned_cols=44 Identities=16% Similarity=0.186 Sum_probs=27.9
Q ss_pred EEEEEEEEEeeccCceeeeEEEECCC---------C-----CCCeEEEecCCEEEEEEEeC
Q 008366 27 EHSFQVKNLTIGRLCRQQTITAVNGS---------L-----PGPTIRVQEGDTLIVHVSNE 73 (568)
Q Consensus 27 ~~~~~~~~~~~~~~G~~~~~~~~NG~---------~-----pGP~i~v~~Gd~v~i~l~N~ 73 (568)
+.+++++..... -...++|.-+|. . | |..|+++|+.=.||+...
T Consensus 45 ~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtP-Pl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 45 EVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTP-AVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp EEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEES-SEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcC-CEEEECCCCceEEEEEEC
Confidence 345555543322 355677877763 1 3 899999998877777654
No 173
>1tza_A APAG protein, SOR45; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG, unknown function; 2.40A {Shewanella oneidensis} SCOP: b.1.23.1
Probab=23.25 E-value=49 Score=27.83 Aligned_cols=50 Identities=16% Similarity=0.278 Sum_probs=30.3
Q ss_pred EEEEEEEeccCCCeEEEEEcCceeEEEEecCCCC----CcEEEeEEEECCCceEEEE
Q 008366 218 TYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT----DPYVTDVVVIAPGQTTDVL 270 (568)
Q Consensus 218 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~----~p~~~d~~~l~pg~r~dv~ 270 (568)
.|++||.|.+... ..|-...|.+.+.||... ..+...+=.|.|||.+...
T Consensus 31 aY~ItI~N~~~~~---vQL~sRhW~Itd~~g~~~eV~G~GVVGeqP~L~PGe~F~Yt 84 (134)
T 1tza_A 31 SYTITIINLGEQA---AKLETRHWIITDANGKTSEVQGAGVVGETPTIPPNTAYQYT 84 (134)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEEETTSCEEEEEEESBTTBCCEECTTEEEEEE
T ss_pred EEEEEEEeCCCCC---EEEEecEEEEEeCCCCEEEEEcCceEcCCCcCCCCCceEEc
Confidence 4799999998542 445556677766666432 0111234478888876543
No 174
>2qjv_A Uncharacterized IOLB-like protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.90A {Salmonella typhimurium LT2}
Probab=23.11 E-value=2.8e+02 Score=26.11 Aligned_cols=62 Identities=8% Similarity=-0.064 Sum_probs=38.4
Q ss_pred EEEEeccCCCeEEEEEcCceeEEEEecCCCCCcEEEeEEEECCCceEEEEEEeCCCCceeEEEEeec
Q 008366 221 LRIINAALNNQLFFKIANHKFTVVAVDAGYTDPYVTDVVVIAPGQTTDVLLKADQPVGSYYMAARAY 287 (568)
Q Consensus 221 lRliN~~~~~~~~~~i~gh~~~via~DG~~~~p~~~d~~~l~pg~r~dv~~~~~~~~g~y~~~~~~~ 287 (568)
+=+||.+... .+..+|..+.+++.--.......-+.+.|..|. +|.|++. .+..+++-+...
T Consensus 51 ~~iv~l~G~~--~V~~~g~~~~~~g~R~svF~~~~p~~lYvp~g~--~v~i~a~-~~~~~~v~sAp~ 112 (270)
T 2qjv_A 51 RCLVLVAGLA--SVXAADSFFYRIGQRMSPFERIPAYSVYLPHHT--EAXVTAE-TDLELAVCSAPG 112 (270)
T ss_dssp EEEEEEESCE--EEEETTEEEEEECCCSSGGGCSCCCEEEECSSC--CEEEEES-SSEEEEEEEEEC
T ss_pred EEEEEecceE--EEEECCEEEeccccccccccCCCCcEEEECCCC--EEEEEec-CCceEEEEeeec
Confidence 4477776554 457788888876432222222223789999999 5566776 457777665543
No 175
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=23.07 E-value=71 Score=26.02 Aligned_cols=79 Identities=9% Similarity=0.030 Sum_probs=43.8
Q ss_pred eEEEecCCEEEEEEEeCCCCCeeEEEc-cccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecChhhhhh-
Q 008366 57 TIRVQEGDTLIVHVSNESPYNITIHWH-GIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHISMLRA- 134 (568)
Q Consensus 57 ~i~v~~Gd~v~i~l~N~l~~~~~iH~H-G~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~~~~~~- 134 (568)
.++++.||+|+.+.... .+++.-= ...+.. .-..+ + + .....| ...+++ ..+|++||.|-..+.=.
T Consensus 27 ~~~f~vGD~L~F~y~~~---~HsV~~V~~~~y~~-C~~~~-~-~--~~~~~G---~~~v~l-~~~G~~yFic~~~~HC~~ 94 (116)
T 1x9u_A 27 GKTFRVGDELEFDFAAG---MHDVAVVTKDAFDN-CKKEN-P-I--SHMTTP---PVKIML-NTTGPQYYICTVGDHCRV 94 (116)
T ss_dssp TCCEETTCEEEECCCTT---TCCEEEECHHHHHT-TCCSS-C-S--EEECSS---SEEEEC-CSCEEEEEECCSTTTTTT
T ss_pred cccCcCCCEEEEEecCC---CCeEEEEChhhcCc-cCCCC-C-c--cccCCC---CeEEEE-CCCCCEEEECCCCCcccc
Confidence 36899999998877543 3333220 001111 10010 0 0 012223 246777 88999999998765544
Q ss_pred cceEEE-EEecCCC
Q 008366 135 TVHGAF-IIRPKSG 147 (568)
Q Consensus 135 Gl~G~l-iV~~~~~ 147 (568)
||..+| .|.+...
T Consensus 95 Gmkl~In~V~~~~~ 108 (116)
T 1x9u_A 95 GQKLSINVVGAGGA 108 (116)
T ss_dssp TCEEEEEEECC---
T ss_pred CCEEEEEEECCCCC
Confidence 999999 8876543
No 176
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=22.19 E-value=54 Score=20.42 Aligned_cols=15 Identities=47% Similarity=0.366 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHhhcc
Q 008366 5 MLLLACALVVLASST 19 (568)
Q Consensus 5 ~~~~~~~~~~~~~~~ 19 (568)
-+++++++++++|+-
T Consensus 20 GLLlifvlavlFssy 34 (37)
T 3arc_L 20 GLLLILVLALLFSSY 34 (37)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhh
Confidence 467888888888764
No 177
>2wgn_B Inhibitor of cysteine peptidase compnd 3; hydrolase inhibitor, dynamics, peptidase inhibitor, cathepsi hydrolase inhibitor; NMR {Pseudomonas aeruginosa}
Probab=22.00 E-value=3.2e+02 Score=22.59 Aligned_cols=74 Identities=11% Similarity=0.180 Sum_probs=40.7
Q ss_pred ECCCCCCCeEEEecCCEEEEEEEeCCCCCeeEEEccccccCC-CCCCCC--CC-cccccCCCCCeEEEEEEeCCCCCce
Q 008366 49 VNGSLPGPTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRS-IWADGP--NM-ITQCPIRPGNSYTYKFRIINQEGTL 123 (568)
Q Consensus 49 ~NG~~pGP~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~-~~~DG~--~~-~~~~~i~PG~~~~y~f~~~~~~Gt~ 123 (568)
+.-.--|-+|+++.||++.|+|.=+-.....-.......... ...|-. +. .....+..|....+.|++ ..+|+.
T Consensus 28 ~~~~~~g~tI~v~~Ge~~~I~L~~NPTTGY~W~~~~~~~~vl~~l~~~~y~~~~~~~~~vGagG~~~w~f~A-~~~G~~ 105 (132)
T 2wgn_B 28 LDDADDCSPLKLTQGQELVLTLPSNPTTGFRWELRNPAASVLKRLGPEVYSNSEEDSGLVGSGGESTWRFRV-AASGDD 105 (132)
T ss_dssp CCCSSCCSCEEECTTCEEEEEECCCTTTSCEEEEEECCTTTEEECCSCCSCSSCSSCCCSSSSCCEEEEEEE-CSCEEE
T ss_pred EecccCCcEEEEcCCCEEEEEeCCCCCCCeEEEEecCCCceEEecccceecCCCCccCCcCCCceEEEEEEE-cCCceE
Confidence 344444667999999999999986543333332222111000 000110 00 011236668889999998 888864
No 178
>1xq4_A Protein APAG; all beta protein, structural genomics, protein structure initiative, PSI, northeast structural genomics consortium, NESG; 2.70A {Bordetella pertussis} SCOP: b.1.23.1
Probab=21.40 E-value=52 Score=27.87 Aligned_cols=50 Identities=18% Similarity=0.292 Sum_probs=29.0
Q ss_pred EEEEEEEeccCCCeEEEEEcCceeEEEEecCCCC----CcEEEeEEEECCCceEEEE
Q 008366 218 TYLLRIINAALNNQLFFKIANHKFTVVAVDAGYT----DPYVTDVVVIAPGQTTDVL 270 (568)
Q Consensus 218 ~~rlRliN~~~~~~~~~~i~gh~~~via~DG~~~----~p~~~d~~~l~pg~r~dv~ 270 (568)
.|++||.|.+... ..|-...|.+.+.||... ..+...+=.|.|||.+...
T Consensus 36 aY~ItI~N~~~~~---vQL~sRhW~ItD~~G~~~eV~G~GVVGeqPvL~PGe~F~Yt 89 (139)
T 1xq4_A 36 AYTVRITNTGSHP---AQVISRHWIITDGEERVQEVRGLGVVGQQPLLAPGETFEYT 89 (139)
T ss_dssp EEEEEEEECSSSC---EEEEEEEEEEECTTSCEEEEEEESSSSCCCEECTTCEEEEE
T ss_pred EEEEEEEeCCCCC---EEEEecEEEEEeCCCCEEEEECCCeecCCCcCCCCCceEEc
Confidence 4789999998543 344555666665555421 0111234478888866543
No 179
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=21.33 E-value=2.6e+02 Score=27.40 Aligned_cols=69 Identities=19% Similarity=0.199 Sum_probs=43.2
Q ss_pred cEEEEEEEeccCCCeEEEEE---c---CceeEEEEecCCCCC----------cEEEeEEEECCCceEEEEEEeCC-----
Q 008366 217 KTYLLRIINAALNNQLFFKI---A---NHKFTVVAVDAGYTD----------PYVTDVVVIAPGQTTDVLLKADQ----- 275 (568)
Q Consensus 217 ~~~rlRliN~~~~~~~~~~i---~---gh~~~via~DG~~~~----------p~~~d~~~l~pg~r~dv~~~~~~----- 275 (568)
-.+..-|-|.|....--+.. + -..|.| ..||..+. |...+-+.|.|||.+++.|+...
T Consensus 38 ~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V-~~~G~~v~f~Gi~~~~~~~~~d~f~~L~pG~Sve~~~dla~~ydLs 116 (343)
T 2x3c_A 38 VRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLV-ERDGQPVSYEGALIKRAAPTDKDFQLLKAGQSLTVQAEVSGLYDMS 116 (343)
T ss_dssp CEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEE-EETTEECCBCSCCCCCCCCCGGGEEEECTTCEEEEEEECTTTBTCC
T ss_pred eEEEEEEEeCCCCceEeeccCCCCcCccceEEE-EeCCcccceeeEEEeccCCChhhcEEeCCCCeEEEEEehhhccccC
Confidence 45566667766544221211 2 234555 46775541 22257899999999999999874
Q ss_pred CCceeEEEEee
Q 008366 276 PVGSYYMAARA 286 (568)
Q Consensus 276 ~~g~y~~~~~~ 286 (568)
.+|.|.++...
T Consensus 117 ~gG~y~v~~~g 127 (343)
T 2x3c_A 117 AQGQYSIRYQL 127 (343)
T ss_dssp SCEEEEEEEC-
T ss_pred CCceEEEEEee
Confidence 46889988764
No 180
>1fft_B Ubiquinol oxidase; electron transport, cytochrome oxidase, membrane protein, oxidoreductase; HET: HEM HEO; 3.50A {Escherichia coli} SCOP: b.6.1.2 f.17.2.1
Probab=20.56 E-value=82 Score=30.64 Aligned_cols=73 Identities=11% Similarity=-0.061 Sum_probs=50.1
Q ss_pred CeEEEecCCEEEEEEEeCCCCCeeEEEccccccCCCCCCCCCCcccccCCCCCeEEEEEEeCCCCCceeEecCh-hhhhh
Q 008366 56 PTIRVQEGDTLIVHVSNESPYNITIHWHGIFQIRSIWADGPNMITQCPIRPGNSYTYKFRIINQEGTLWWHAHI-SMLRA 134 (568)
Q Consensus 56 P~i~v~~Gd~v~i~l~N~l~~~~~iH~HG~~~~~~~~~DG~~~~~~~~i~PG~~~~y~f~~~~~~Gt~~YH~h~-~~~~~ 134 (568)
..|.+..|..|++.++.. +--|++..-.+... .-+-||..-+..|.+ +++|+|+..|.. -+...
T Consensus 151 n~l~lP~g~~V~~~lTS~-DViHsf~IP~lg~k-------------~DaiPGr~n~~~~~~-~~~G~y~g~CsE~CG~~H 215 (315)
T 1fft_B 151 NEIAFPANTPVYFKVTSN-SVMNSFFIPRLGSQ-------------IYAMAGMQTRLHLIA-NEPGTYDGISASYSGPGF 215 (315)
T ss_dssp SBCCCCSSSEEEEEECBS-SSCEEEEEGGGTEE-------------EEECBTSCEEEEEEC-CSCBCCEEBCCSCCSTTT
T ss_pred ceEEEeCCCEEEEEEEeC-CccceeeecccCcE-------------EeecCCcceeeEEec-CCCeEEEEeccccchhhH
Confidence 468899999999999876 33344333332211 125578888889987 999999999864 23333
Q ss_pred -cceEEEEEe
Q 008366 135 -TVHGAFIIR 143 (568)
Q Consensus 135 -Gl~G~liV~ 143 (568)
.|.+.++|.
T Consensus 216 s~M~~~v~vv 225 (315)
T 1fft_B 216 SGMKFKAIAT 225 (315)
T ss_dssp TTCCEECCBC
T ss_pred HhccceEEEe
Confidence 677777776
Done!