Citrus Sinensis ID: 008370

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------57
Protein Sequence
MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSKNPKSACSSACDKVILNTGDQGNSLSTRDLHEFIPNMACDRMKKSVGSQYSSDQLKDLMESIEKEYVLINSHFASTDGFSFYLDASLQDNSMAKVSICPSKKNDHSAITMQTKDMPSDSASGAENSLFHVPAPLETSNRLFILKEVQGLTVLHPSTGLQLLHQYVHALTELAEAKYDAGLFLESFSVELVVLAIWKKALQICGSWLTSMSHGELPGPSSAYGHTPVQGGISSDPNSENNVDFSSPFSVSTWAEQGFILAFDRAEKLSYNIRDSDGAAEMPDAMEIIYQRALSVGKIGAVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQSHQSNFLIFQPSSNLSSDSAPK
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccEEEcccccccccccccccccccccccccHHHcccccccccccHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHccccccccHHHHHHccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHccEEEcccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEccccHHEEEcccccccEEEEEccccHHHcccccccccccccHHHHcHHHHHHccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHcccccccccccccccHHHHHHHHHHHcccHHHcccHHHHHccccEccccccHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHccccEEEEEcccccccHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccccccccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHEcccccccccccccc
Coil and Loop (DISEMBL)
MCYVFMIVSANACQNLLVstnevtpvlkigdfgfarsltpqdladtlcgsplymapeiiqnhkydakaDLWSVGAILFQLvtgkppfdgsnqLQLFQNILTstelrfppgaieelhpDCVDLCRCllrqnpveritfkeffnhrflGELRQTVhaeqhsvvpetkpMVELlnsstpedrhslhsehptnsssknpksacssACDKVILntgdqgnslstrdlhefipnmacdrmkksvgsqyssDQLKDLMESIEKEYVLINShfastdgfsfyldaslqdnsmakvsicpskkndhsaitmqtkdmpsdsasgaenslfhvpapletsnRLFILKEVqgltvlhpstglqLLHQYVHALTELAEAKYDAGLFLESFSVELVVLAIWKKALQICGSwltsmshgelpgpssayghtpvqggissdpnsennvdfsspfsvstWAEQGFILAFDRAEKLsynirdsdgaaempDAMEIIYQRALSVGKIGAVEEYMGNKASASALYSKAMLLLSFIVGeaaslslyppfslnpsdkkRIQGYINNLQSHqsnflifqpssnlssdsapk
Flexible Loop (DISEMBL)
MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLhsehptnsssknpksACSSACDKVILNTgdqgnslstrDLHEFIPNMACDRMKKSVGSQYSSDQLKDLMESIEKEYVLINSHFASTDGFSFYLDASLQDNSMAKVSICPSKKNDHSAITMQTKDMPSDSASGAENSLFHVPAPLETSNRLFILKEVQGLTVLHPSTGLQLLHQYVHALTELAEAKYDAGLFLESFSVELVVLAIWKKALQICGSWLTSMSHGELPGPSSAYGHTPVQGGISSDPNSENNVDFSSPFSVSTWAEQGFILAFDRAEKLSYNIRDSDGAAEMPDAMEIIYQRALSVGKIGAVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQSHQSNflifqpssnlssdsapk
Low Complexity Region (SEG)
MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTnsssknpksacssacDKVILNTGDQGNSLSTRDLHEFIPNMACDRMKKSVGSQYSSDQLKDLMESIEKEYVLINSHFASTDGFSFYLDASLQDNSMAKVSICPSKKNDHSAITMQTKDMPSDSASGAENSLFHVPAPLETSNRLFILKEVQGLTVLHPSTGLQLLHQYVHALTELAEAKYDAGLFLESFSVELVVLAIWKKALQICGSWLTSMSHGELPGPSSAYGHTPVQGGISSDPNSENNVDFSSPFSVSTWAEQGFILAFDRAEKLSYNIRDSDGAAEMPDAMEIIYQRALSVGKIGAVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQSHQSNFLIFQPSSNLSSDSAPK
Disordered region (IsUnstruct)
*CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVH***************************************************VIL****************FI*************************ESIEKEYVLINSHFASTDGFSFYLDASL****************************************FHVPAPLETSNRLFILKEVQGLTVLHPSTGLQLLHQYVHALTELAEAKYDAGLFLESFSVELVVLAIWKKALQICGSWLTS*************************************FSVSTWAEQGFILAFDRAEKLSYNIRDS**AAEMPDAMEIIYQRALSVGKIGAVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLN*****RIQGYINNLQSHQSNFLIF*************
Disordered Region (DISOPRED)
MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG*****************************************************************************************************************************************************************************************************************VHALTELAEAKYDAGLFLESFSVELVVLAIWKKALQICGS*******************************************VSTWAEQGFILAFDRAEKLSYN***SDGAAEMPDAMEIIYQRALSVGKIGAVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQSHQSN*****************
Disordered Region (DISEMBL)
MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNS***************************SACDKVILNTGDQGNSLSTRDLHEFIPNMACDRM***********QLKDLMESIEKEYVLINSHFASTDGFSFYLDASLQDNSMAKVSICPSKKNDHSAITMQ************ENSLFHVPAPLETSNRLFILKEVQGLTVLHPSTGLQLLHQYVHALTELAEAKYDAGLFLESFSVELVVLAIWKKALQICGSWLTSMSHGELPGPSSAYGHTPVQGGISSDPNSENNVDFSSPFSVSTWAEQGFILAFDRAEKLSYNIRDSDGAAEMPDAMEIIYQRALSVGKIGAVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQSHQSNFLIFQPS**********
Disordered Region (DISPRO)
***VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVE********DR*SL**************SACS****************************************QY*SDQLKDLMESIEKEYVLINSHFASTDGFSFYL***************************************************************QGLTVLHPSTGLQLLHQYVHALTELAEAKYDAGLFLESFSVELVVLAIWKKALQICGSWLTSMS*****************************VDFSSPFSVSTWAEQGFILAFDRAEKLSYNIRDSDGAAEMPDAMEIIYQRALSVGKIGAVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQSHQSNFLIF*************
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
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TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSKNPKSACSSACDKVILNTGDQGNSLSTRDLHEFIPNMACDRMKKSVGSQYSSDQLKDLMESIEKEYVLINSHFASTDGFSFYLDASLQDNSMAKVSICPSKKNDHSAITMQTKDMPSDSASGAENSLFHVPAPLETSNRLFILKEVQGLTVLHPSTGLQLLHQYVHALTELAEAKYDAGLFLESFSVELVVLAIWKKALQICGSWLTSMSHGELPGPSSAYGHTPVQGGISSDPNSENNVDFSSPFSVSTWAEQGFILAFDRAEKLSYNIRDSDGAAEMPDAMEIIYQRALSVGKIGAVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQSHQSNFLIFQPSSNLSSDSAPK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	568	2.2.26 [Sep-21-2011]
Q3ZDQ4	941	Serine/threonine-protein	yes	no	0.211	0.127	0.512	5e-34
Q6C7U0	710	Serine/threonine-protein	yes	no	0.198	0.159	0.536	1e-33
Q6H9I1	952	Serine/threonine-protein	N/A	no	0.214	0.128	0.528	2e-33
A6RYB8	952	Serine/threonine-protein	N/A	no	0.214	0.128	0.528	2e-33
Q7RX99	932	Serine/threonine-protein	N/A	no	0.264	0.160	0.440	4e-33
Q5A649	834	Serine/threonine-protein	N/A	no	0.290	0.197	0.431	5e-33
Q6BS08	875	Serine/threonine-protein	yes	no	0.204	0.132	0.546	6e-33
A7KAL2	960	Serine/threonine-protein	yes	no	0.214	0.127	0.519	7e-33
Q1DN93	969	Serine/threonine-protein	N/A	no	0.207	0.121	0.561	1e-32
Q0CLX3	964	Serine/threonine-protein	N/A	no	0.202	0.119	0.559	1e-32

>sp|Q3ZDQ4|ATG1_PODAS Serine/threonine-protein kinase atg1 OS=Podospora anserina GN=ATG1 PE=2 SV=1

 Score =  146 bits (368), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 63/123 (51%), Positives = 90/123 (73%), Gaps = 3/123 (2%)

Query: 25  PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
           P+LK+ DFGFAR L    LA+TLCGSPLYMAPEI++  +YDAKADLWSVG +L+++ TG+
Sbjct: 211 PMLKLADFGFARVLPSTSLAETLCGSPLYMAPEILRYERYDAKADLWSVGTVLYEMATGR 270

Query: 85  PPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           PPF   N ++L + I  +  +++FP  ++  + P+   L R LL++NPVERI+F +FFNH
Sbjct: 271 PPFRAGNHVELLRKIEAAEDQVKFPRESV--VSPELKSLVRALLKRNPVERISFADFFNH 328

Query: 144 RFL 146
             +
Sbjct: 329 TVI 331

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.
Podospora anserina (taxid: 5145)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q6C7U0|ATG1_YARLI Serine/threonine-protein kinase ATG1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=ATG1 PE=3 SV=1

 Score =  144 bits (364), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 66/123 (53%), Positives = 85/123 (69%), Gaps = 10/123 (8%)

Query: 25  PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
           P+LKI DFGFAR L    LA+TLCGSPLYMAPEI++  KY+AKADLWSVGA+ +++V GK
Sbjct: 180 PILKIADFGFARILPASALAETLCGSPLYMAPEILRYEKYNAKADLWSVGAVTYEMVVGK 239

Query: 85  PPFDGSNQLQLFQNILTSTEL----RFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF 140
           PPF  +N ++L + I  S ++    R PP        D  D  RCLL++NP +RI FKE+
Sbjct: 240 PPFKANNYVELLKTIEQSNDVIGFGREPPSE------DMQDFVRCLLKKNPADRIGFKEY 293

Query: 141 FNH 143
           F H
Sbjct: 294 FEH 296

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6H9I1|ATG1_BOTFU Serine/threonine-protein kinase ATG1 OS=Botryotinia fuckeliana GN=atg1 PE=3 SV=1

 Score =  144 bits (362), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 66/125 (52%), Positives = 88/125 (70%), Gaps = 3/125 (2%)

Query: 25  PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
           P+LK+ DFGFARSL    LA+TLCGSPLYMAPEI++  KYDA+ADLWS+G +L++++TG+
Sbjct: 209 PMLKLADFGFARSLPSTSLAETLCGSPLYMAPEILRYEKYDARADLWSIGTVLYEMMTGR 268

Query: 85  PPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           PPF   N +QL Q I  +  E+RFP   I     D  D+ R LL++ P +RITF E+F H
Sbjct: 269 PPFKAINHVQLLQKIEKNQDEIRFPSRGI--YSRDLKDIVRRLLKKKPEDRITFPEYFAH 326

Query: 144 RFLGE 148
             + E
Sbjct: 327 PVVTE 331

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.

Botryotinia fuckeliana (taxid: 40559)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A6RYB8|ATG1_BOTFB Serine/threonine-protein kinase atg1 OS=Botryotinia fuckeliana (strain B05.10) GN=atg1 PE=3 SV=1

 Score =  144 bits (362), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 66/125 (52%), Positives = 88/125 (70%), Gaps = 3/125 (2%)

Query: 25  PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
           P+LK+ DFGFARSL    LA+TLCGSPLYMAPEI++  KYDA+ADLWS+G +L++++TG+
Sbjct: 209 PMLKLADFGFARSLPSTSLAETLCGSPLYMAPEILRYEKYDARADLWSIGTVLYEMMTGR 268

Query: 85  PPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           PPF   N +QL Q I  +  E+RFP   I     D  D+ R LL++ P +RITF E+F H
Sbjct: 269 PPFKAINHVQLLQKIEKNQDEIRFPSRGI--YSRDLKDIVRRLLKKKPEDRITFPEYFAH 326

Query: 144 RFLGE 148
             + E
Sbjct: 327 PVVTE 331

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.

Botryotinia fuckeliana (strain B05.10) (taxid: 332648)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q7RX99|ATG1_NEUCR Serine/threonine-protein kinase atg-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=atg-1 PE=3 SV=1

 Score =  143 bits (360), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 74/168 (44%), Positives = 104/168 (61%), Gaps = 18/168 (10%)

Query: 25  PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
           P+LK+ DFGFAR L    LA+TLCGSPLYMAPEI++  KYDAKADLWSVG +L+++VTG+
Sbjct: 209 PMLKLADFGFARVLPSTSLAETLCGSPLYMAPEILRYEKYDAKADLWSVGTVLYEMVTGR 268

Query: 85  PPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           PPF  SN ++L + I +S + ++F   ++  +  +   L R LL++NPVERI+F++ FN 
Sbjct: 269 PPFKASNHVELLRKIESSGDVIKFTRESV--VSQEMKGLIRALLKKNPVERISFEDLFN- 325

Query: 144 RFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSS 191
                         H VV E  P +   +   P  R SL  E P + +
Sbjct: 326 --------------HPVVTEPIPGLVEDDIPKPPRRRSLKEERPVSRA 359

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.

Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) (taxid: 367110)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q5A649|ATG1_CANAL Serine/threonine-protein kinase ATG1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=ATG1 PE=3 SV=1

 Score =  143 bits (360), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 102/169 (60%), Gaps = 4/169 (2%)

Query: 25  PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
           P+LKI DFGFAR L    +A+TLCGSPLYMAPEI++  KY+AKADLWSVGA+L+++  GK
Sbjct: 234 PILKIADFGFARFLPSTSMAETLCGSPLYMAPEILRYEKYNAKADLWSVGAVLYEMTVGK 293

Query: 85  PPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           PPF   N ++L +NI  + + ++FP  A  ++      L R LL+ NP ERI+F EFFN 
Sbjct: 294 PPFKAGNHIELLKNIEKANDKIKFPSAA--QVPEPLKQLIRSLLKYNPTERISFNEFFND 351

Query: 144 RFLG-ELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSS 191
             +  +L       + S + E   + E ++   P +R     E   N S
Sbjct: 352 SLITCDLDDNDQPLETSQMDENLFISEYISPIAPAERSQFFKEQKKNDS 400

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.

Candida albicans (strain SC5314 / ATCC MYA-2876) (taxid: 237561)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q6BS08|ATG1_DEBHA Serine/threonine-protein kinase ATG1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=ATG1 PE=3 SV=2

 Score =  142 bits (359), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 65/119 (54%), Positives = 85/119 (71%), Gaps = 3/119 (2%)

Query: 25  PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
           P+LKI DFGFAR L    +A+TLCGSPLYMAPEI++  KY+AKADLWSVGA+L+++  GK
Sbjct: 198 PLLKIADFGFARFLPSTSMAETLCGSPLYMAPEILRYEKYNAKADLWSVGAVLYEMTVGK 257

Query: 85  PPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
           PPF   N +QL +NI  S + ++FP  A  ++      L R LL+ NP ER++F EFFN
Sbjct: 258 PPFRADNHVQLLKNIEKSNDRIKFPSAA--QVPESLKRLIRSLLKYNPTERVSFNEFFN 314

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.

Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (taxid: 284592)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|A7KAL2|ATG1_PENCW Serine/threonine-protein kinase ATG1 OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=atg1 PE=3 SV=1

 Score =  142 bits (358), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 68/131 (51%), Positives = 91/131 (69%), Gaps = 9/131 (6%)

Query: 22  EVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           E  P+LKI DFGFARSL    LA+TLCGSPLYMAPEI++  KYDAKADLWSVG +L+++V
Sbjct: 204 ESLPMLKIADFGFARSLPATSLAETLCGSPLYMAPEILRYEKYDAKADLWSVGTVLYEMV 263

Query: 82  TGKPPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHP---DCVDLCRCLLRQNPVERITF 137
            G+PPF  +N ++L + I    + +RFP     E +P   D   L R LL++NPVER+ F
Sbjct: 264 VGRPPFRATNHVELLRKIEKGEDRIRFP-----EDNPASDDIKKLIRGLLKRNPVERLNF 318

Query: 138 KEFFNHRFLGE 148
            EFF++  + +
Sbjct: 319 PEFFSNNVIND 329

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.

Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) (taxid: 500485)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q1DN93|ATG1_COCIM Serine/threonine-protein kinase ATG1 OS=Coccidioides immitis (strain RS) GN=ATG1 PE=3 SV=1

 Score =  142 bits (357), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 68/121 (56%), Positives = 84/121 (69%), Gaps = 3/121 (2%)

Query: 22  EVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           E  P+LKI DFGFARSL    LA+TLCGSPLYMAPEI++  KYDAKADLWSVG +LF++V
Sbjct: 212 ESLPMLKIADFGFARSLPATSLAETLCGSPLYMAPEILRYEKYDAKADLWSVGTVLFEMV 271

Query: 82  TGKPPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF 140
            GK PF   N + L + I    + +RFP     E  P    L R LL++NPVER++FK+F
Sbjct: 272 VGKSPFRAGNHVDLLRKIEQGEDNIRFP--IQTEASPPLKKLIRSLLKRNPVERLSFKDF 329

Query: 141 F 141
           F
Sbjct: 330 F 330

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.

Coccidioides immitis (strain RS) (taxid: 246410)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q0CLX3|ATG1_ASPTN Serine/threonine-protein kinase atg1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=atg1 PE=3 SV=1

 Score =  141 bits (356), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 66/118 (55%), Positives = 84/118 (71%), Gaps = 3/118 (2%)

Query: 25  PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
           P+LKI DFGFARSL    LA+TLCGSPLYMAPEI++  KYDAKADLWSVG +L+++V GK
Sbjct: 211 PMLKIADFGFARSLPATSLAETLCGSPLYMAPEILRYEKYDAKADLWSVGTVLYEMVVGK 270

Query: 85  PPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF 141
           PPF  SN ++L + I    + ++FPP        D   L R LL++NPVER+ F +FF
Sbjct: 271 PPFRASNHVELLRRIERGEDNIKFPPE--NPASDDIKALIRMLLKRNPVERMNFADFF 326

Serine/threonine protein kinase probably involved in the cytoplasm to vacuole transport (Cvt) and in autophagy, where it may be required for the formation of autophagosomes.

Aspergillus terreus (strain NIH 2624 / FGSC A1156) (taxid: 341663)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	568
255548075	676	serine/threonine-protein kinase, putativ	0.936	0.786	0.602	1e-177
224130696	673	predicted protein [Populus trichocarpa]	0.936	0.790	0.570	1e-170
224068187	710	predicted protein [Populus trichocarpa]	0.971	0.777	0.548	1e-166
147856746	715	hypothetical protein VITISV_012721 [Viti	0.929	0.738	0.537	1e-154
296089024	669	unnamed protein product [Vitis vinifera]	0.903	0.766	0.556	1e-153
356522466	690	PREDICTED: serine/threonine-protein kina	0.924	0.760	0.523	1e-147
356560221	682	PREDICTED: serine/threonine-protein kina	0.924	0.769	0.522	1e-145
297821080	626	kinase family protein [Arabidopsis lyrat	0.857	0.777	0.486	1e-133
18412205	626	protein kinase family protein [Arabidops	0.857	0.777	0.484	1e-129
449445752	715	PREDICTED: serine/threonine-protein kina	0.896	0.711	0.465	1e-128

>gi|255548075|ref|XP_002515094.1| serine/threonine-protein kinase, putative [Ricinus communis] gi|223545574|gb|EEF47078.1| serine/threonine-protein kinase, putative [Ricinus communis]

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 327/543 (60%), Positives = 394/543 (72%), Gaps = 11/543 (2%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QNLL+S+NE TP LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN KYDAKADLWSV
Sbjct: 141 QNLLLSSNEETPRLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNQKYDAKADLWSV 200

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           GAILFQLVTGKPPFDG++Q QLFQNILTSTELRFP GA+EELHPDC+DLCR LLRQNPVE
Sbjct: 201 GAILFQLVTGKPPFDGNSQYQLFQNILTSTELRFPQGALEELHPDCLDLCRSLLRQNPVE 260

Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSK 193
           R+TFKEFFNH+FLGE R  +  EQ S+V ETK +VE L+SS  ++R  LHSEHP +S+ +
Sbjct: 261 RLTFKEFFNHKFLGEPRLEMDPEQESLVQETKSVVEQLDSSGSDERSLLHSEHPMHSTGR 320

Query: 194 NPKSACSSACDKVILNTGDQGNSLSTRDLHEFIPNMACDRMKKSV-GSQYSSD--QLKDL 250
           N K + S   D V+ +    G+   T  +H  +P  A DR ++ + GSQ  SD  ++ D 
Sbjct: 321 NAKLSSSFVHDDVV-HAKVHGSISGTESVHSSLPIFAHDRTRRMIDGSQCPSDHHRVADS 379

Query: 251 MESIEKEYVLINSHFASTDGFSFYLDASLQDNSMAKVSICPSKKNDHS-AITMQTKDMPS 309
            ESIE++YVL+N HF S +  S+Y + SLQ NS  +V +CP KKN+   A+   TK   +
Sbjct: 380 AESIERDYVLVNCHFGSMENLSYYSETSLQGNSTTRVFVCPPKKNNQDVAVAPLTKQCAA 439

Query: 310 DSASGAENSLFHVPAPLETSNRLFILKEVQGLTVLHPSTGLQLLHQYVHALTELAEAKYD 369
            S   A+N + +   PL  S    IL EVQG + L PS  L LL++YV A+ ELA+ K++
Sbjct: 440 SSVDSAKNPVIYGSDPLAASRASTILMEVQGQSRLTPSASLHLLNRYVQAVAELAQEKHN 499

Query: 370 AGLFLESFSVELVVLAIWKKALQICGSWLTSMSHGELPGPSSAYGHTPVQGGISSDPNSE 429
           AGLFLESFSVELVVLAIWKKAL IC SWL S +  ELP  SSA    P  GG +      
Sbjct: 500 AGLFLESFSVELVVLAIWKKALHICNSWLASSAGSELPESSSANESNPDHGGRA------ 553

Query: 430 NNVDFSSPFSVSTWAEQGFILAFDRAEKLSYNIRDSDGAAEMPDAMEIIYQRALSVGKIG 489
           N +D   P S   WAEQ F+ A++RAEKLS +I + D AA+MPDAMEII+Q+AL+VG   
Sbjct: 554 NKMDLDRPSSACKWAEQEFVAAYNRAEKLSDHISNMDAAAQMPDAMEIIFQKALAVGTSA 613

Query: 490 AVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQSHQ 549
           AV+EYM N+ SA+  YSKAMLLLSF+V EAASL L PPF L P++KKRIQ YI NLQSHQ
Sbjct: 614 AVDEYMENRGSAAISYSKAMLLLSFVVEEAASLPLNPPFLLTPANKKRIQNYIMNLQSHQ 673

Query: 550 SNF 552
           S F
Sbjct: 674 SYF 676

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224130696|ref|XP_002320905.1| predicted protein [Populus trichocarpa] gi|222861678|gb|EEE99220.1| predicted protein [Populus trichocarpa]

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 319/559 (57%), Positives = 383/559 (68%), Gaps = 27/559 (4%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QNLL+S+N++TP LKIGDFGFARSL   DLADTLCGSPLYMAPEIIQN KYDAKADLWSV
Sbjct: 138 QNLLLSSNDLTPQLKIGDFGFARSLASSDLADTLCGSPLYMAPEIIQNKKYDAKADLWSV 197

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           GAILFQLVTGKPPFDG++Q QLFQNILTSTELRFP GA+EELHPDCVDLCR LLR+NPVE
Sbjct: 198 GAILFQLVTGKPPFDGNSQYQLFQNILTSTELRFPQGALEELHPDCVDLCRGLLRRNPVE 257

Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSK 193
           R+TFKEFFNH+FLGE R  V A+  S +P+ K +    ++S  + R  L  ++ T     
Sbjct: 258 RLTFKEFFNHKFLGEPRLLVSAKS-SPLPQVKSVAGQFDASASDTRSQLEHDNLT----- 311

Query: 194 NPKSACSSACDKVILNTGDQGNSLSTRDLHEFIPNMACDRMKKSV-GSQYSSDQLK--DL 250
                    CD+                +H  +PN+  DRM KS  GSQ  SDQL+  DL
Sbjct: 312 ----VLEKVCDR-------------NESVHGSLPNIVHDRMGKSADGSQSLSDQLRVADL 354

Query: 251 MESIEKEYVLINSHFASTDGFSFYLDASLQDNSMAKVSI-CPSKKNDHSAITMQTKDMPS 309
           MESIEK+YV++N HFAS + FS+YL+ SL D+S +K SI  P K N  + +  QTK+   
Sbjct: 355 MESIEKDYVIVNRHFASMENFSYYLETSLHDSSTSKASIYLPQKNNQDTVVATQTKEFTG 414

Query: 310 DSASGAENSLFHVPAPLETSNRLFILKEVQGLTVLHPSTGLQLLHQYVHALTELAEAKYD 369
            S   A N   H   PL  S    IL+E Q L +LHPS  LQ L+QY   ++ELA+ KYD
Sbjct: 415 SSVGSANNPEVHGSEPLSASCVPTILREAQRLPILHPSIKLQFLNQYAQEISELAQEKYD 474

Query: 370 AGLFLESFSVELVVLAIWKKALQICGSWLTSMSHGELPGPSSAYGHTPVQGGISSDPNSE 429
           AG+FLESFSVELVVLAIWK+AL+IC  W+ S    +L   SSA     V GG +  P + 
Sbjct: 475 AGMFLESFSVELVVLAIWKRALEICEHWVASTGGSKLHESSSANESALVYGGTNLTPPAI 534

Query: 430 NNVDFSSPFSVSTWAEQGFILAFDRAEKLSYNIRDSDGAAEMPDAMEIIYQRALSVGKIG 489
             +DF  P S   WAE+GFILAFD AEKLS ++RD D AAEMPDAME+I+Q+AL+VG  G
Sbjct: 535 GKLDFIEPSSACKWAEKGFILAFDHAEKLSNSLRDMDAAAEMPDAMELIFQKALAVGTSG 594

Query: 490 AVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQSHQ 549
           AV+EYM NK  A   YSKAMLLL FI+ EA SL L PPFSL P+ +KR++ YI NLQS +
Sbjct: 595 AVDEYMENKGGADNSYSKAMLLLHFIMEEATSLPLNPPFSLTPASRKRVKSYILNLQSRR 654

Query: 550 SNFLIFQPSSNLSSDSAPK 568
           S F + QP    SSDS  K
Sbjct: 655 SRFSMLQPFPEQSSDSLTK 673

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224068187|ref|XP_002302678.1| predicted protein [Populus trichocarpa] gi|222844404|gb|EEE81951.1| predicted protein [Populus trichocarpa]

 Score =  592 bits (1525), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 316/576 (54%), Positives = 389/576 (67%), Gaps = 24/576 (4%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QNLL+ +N++TP LKIGDFGFARSLT  DLADTLCGSPLYMAPEIIQN KYDAKADLWSV
Sbjct: 138 QNLLLLSNDLTPQLKIGDFGFARSLTSSDLADTLCGSPLYMAPEIIQNKKYDAKADLWSV 197

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP-- 131
           GA+LFQLVTGKPPFDG++Q QLFQNILTSTELRFP GA+EELHPDCVDLCR LL +NP  
Sbjct: 198 GAVLFQLVTGKPPFDGNSQYQLFQNILTSTELRFPQGALEELHPDCVDLCRSLLCRNPGT 257

Query: 132 ---------------VERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTP 176
                          VER+TFKEFFNH+F  E R  + A+   ++P+ K +VE  ++S  
Sbjct: 258 DYYGEIFVLVYVHMLVERLTFKEFFNHKFFEEPRLLLDAKS-PLLPQMKSVVEQFDASAS 316

Query: 177 EDRHSLHSEHPTNSSSKNPKSACSSACDKVILNTGDQGNSLSTRDLHEFIPNMACDRMKK 236
             R  +   H  +S+++N     +S  D + +      ++     +H  +P++  DRM +
Sbjct: 317 NTRSQMG--HCLHSANRNAILTSTSEHDNITMLAKVHDSTSRNDSVHGIVPSIVHDRMGR 374

Query: 237 SV-GSQYSSDQLK--DLMESIEKEYVLINSHFASTDGFSFYLDASLQDNSMAKVSI-CPS 292
           S  GSQ S DQL+  DLMES+EK+YV++N HF+S + FS+YL+ SLQD+S +K S+  P 
Sbjct: 375 SAYGSQSSLDQLRVADLMESLEKDYVIVNRHFSSMENFSYYLETSLQDSSTSKSSVQLPQ 434

Query: 293 KKNDHSAITMQTKDMPSDSASGAENSLFHVPAPLETSNRLFILKEVQGLTVLHPSTGLQL 352
           K N    + +QT+     S S A +   H   PL  S    IL+EVQGL + HPS  L  
Sbjct: 435 KNNQDMVVAIQTEAFTGSSVSSANDPQVHGSEPLTASCVPNILREVQGLPIPHPSIKLHF 494

Query: 353 LHQYVHALTELAEAKYDAGLFLESFSVELVVLAIWKKALQICGSWLTSMSHGELPGPSSA 412
           L+QY  A+ ELA+ KYD+GLFLESFSVELVVLAIWKK L+IC  W+ S    ELP  SSA
Sbjct: 495 LNQYAQAIVELAQEKYDSGLFLESFSVELVVLAIWKKVLEICNHWVASNEGSELPESSSA 554

Query: 413 YGHTPVQGGISSDPNSENNVDFSSPFSVSTWAEQGFILAFDRAEKLSYNIRDSDGAAEMP 472
              T V GGI   P +   +DF  P S   WAE+ FILAFDR EKLS+N+R  D AAEMP
Sbjct: 555 NESTFVHGGIDLIPPASGKMDFIEPSSAYKWAEKSFILAFDRTEKLSHNLRYMDAAAEMP 614

Query: 473 DAMEIIYQRALSVGKIGAVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNP 532
           DAME+I+Q AL+VG+ GAV+EYM NK  A   YSKAMLLL FI  EA SL L PPFSL  
Sbjct: 615 DAMELIFQEALAVGRSGAVDEYMENKGGADVSYSKAMLLLHFIAEEATSLPLKPPFSLTS 674

Query: 533 SDKKRIQGYINNLQSHQSNFLIFQPSSNLSSDSAPK 568
           + +KRIQ YI NLQSH+S+F + QP    S DS  K
Sbjct: 675 ACRKRIQSYILNLQSHRSHFSMLQPIPEQSPDSPTK 710

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147856746|emb|CAN81351.1| hypothetical protein VITISV_012721 [Vitis vinifera]

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 315/586 (53%), Positives = 385/586 (65%), Gaps = 58/586 (9%)

Query: 14  QNLLVSTNEVT--PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLW 71
           QNLL+STNE T  P+LKIGDFGFAR LT Q LADT CGSPLYMAPEIIQN KYDAKADLW
Sbjct: 141 QNLLLSTNEATTAPLLKIGDFGFARDLT-QGLADTQCGSPLYMAPEIIQNQKYDAKADLW 199

Query: 72  SVGAILFQLVTGKPPFDGSNQLQ-----------------------------LFQNILTS 102
           SVGAILFQLVTG+PPFDGS Q Q                             LF NIL++
Sbjct: 200 SVGAILFQLVTGRPPFDGSTQFQVLITVVVNSLREIISFNSYNHSQKLQVMLLFHNILSA 259

Query: 103 TELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVP 162
           +ELRFP GA++ELHPDCVDLCR LLRQNPVER+TF EFFNH+FL E R TV  EQ S++P
Sbjct: 260 SELRFPQGALQELHPDCVDLCRRLLRQNPVERLTFNEFFNHKFLVEPRLTVDVEQPSLLP 319

Query: 163 ETKPMVE----LLNSSTPEDRHS---LHSEHPTNSSSKNPKSACSSACD--KVILNTGDQ 213
           +TKP+V     L   + P D      L   H  NSS++NP S  SS  D    IL+  + 
Sbjct: 320 QTKPLVVQFECLRGKNLPTDSTQSPQLPFAHQLNSSTRNP-SLTSSIHDVNSKILHRQEH 378

Query: 214 GNSLSTRDLHEFIPNMACDRMKKSVGSQYSSDQLKDLMESIEKEYVLINSHFASTDGFSF 273
           G++ S +  + F+P++A D            D + D MESIEK YVL+N+HFAS +  S 
Sbjct: 379 GSTSSNKGGYRFMPSIAHD------------DPIADSMESIEKGYVLVNAHFASMETLSS 426

Query: 274 YLDASLQDNSMAKVSI-CPSKKNDHSAITMQTKDMPSDSASGAENSLFHVPAPLETSNRL 332
            L+ SLQDN  A+ +I  P+K ++  A+ M+T ++ + S    E+   + P P   S   
Sbjct: 427 SLETSLQDNPAARATIYSPNKNDEDVAVAMKTTELTATSVGAVESPGNYEPDPSTPSCAS 486

Query: 333 FILKEVQGLTVLHPSTGLQLLHQYVHALTELAEAKYDAGLFLESFSVELVVLAIWKKALQ 392
            ILKE Q L+VLH S  L LLH+Y HA+++LA+ K   G FLESFSVELVVLAIWKKA+Q
Sbjct: 487 TILKEDQELSVLHSSRRLHLLHKYAHAISKLAQEKLKDGQFLESFSVELVVLAIWKKAVQ 546

Query: 393 ICGSWLTSMSHGELPGPSSAYGHTPVQ--GGISSDPNSENNVDFSSPFSVSTWAEQGFIL 450
           +C SWL S +  +LP  SS     PVQ   G+S + + E  +DFS P SVS   E  FI 
Sbjct: 547 VCSSWLASTAGSDLPETSSTNESAPVQEVAGLSLN-SQEEEIDFSKPSSVSILVESEFIA 605

Query: 451 AFDRAEKLSYNIRDSDGAAEMPDAMEIIYQRALSVGKIGAVEEYMGNKASASALYSKAML 510
           A D AEKLS +++D DG ++MPDAMEII+Q AL+ GK GAV+EYM NK SA+ALYSKAML
Sbjct: 606 ACDHAEKLSSHLQDMDGNSKMPDAMEIIFQAALAFGKSGAVDEYMENKGSAAALYSKAML 665

Query: 511 LLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQSHQSNFLIFQ 556
           LLSFIVGEA  L L PPFSL P++K RIQ YI  L+SH + F I Q
Sbjct: 666 LLSFIVGEATLLPLNPPFSLTPANKHRIQRYIIYLESHLTRFQISQ 711

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296089024|emb|CBI38727.3| unnamed protein product [Vitis vinifera]

 Score =  550 bits (1416), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 309/555 (55%), Positives = 375/555 (67%), Gaps = 42/555 (7%)

Query: 14  QNLLVSTNEVT--PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLW 71
           QNLL+STNE T  P+LKIGDFGFAR LT Q LADT CGSPLYMAPEIIQN KYDAKADLW
Sbjct: 141 QNLLLSTNEATTAPLLKIGDFGFARDLT-QGLADTQCGSPLYMAPEIIQNQKYDAKADLW 199

Query: 72  SVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
           SVGAILFQLVTG+PPFDGS Q QLF NIL+++ELRFP GA++ELHPDCVDLCR LLRQNP
Sbjct: 200 SVGAILFQLVTGRPPFDGSTQFQLFHNILSASELRFPQGALQELHPDCVDLCRRLLRQNP 259

Query: 132 VERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVE----LLNSSTPEDRH---SLHS 184
           VER+TF EFFNH+FL E R TV  EQ S++P+TKP+V     L   + P D      L  
Sbjct: 260 VERLTFNEFFNHKFLVEPRLTVDVEQPSLLPQTKPLVVQFECLRGKNLPTDSTQSPQLPF 319

Query: 185 EHPTNSSSKNPKSACSSACD--KVILNTGDQGNSLSTRDLHEFIPNMACDRMKKSVGSQY 242
            H  NSS++NP S  SS  D    IL+  + G++ S +  + F+P++A D          
Sbjct: 320 AHQLNSSTRNP-SLTSSIHDVNSKILHRQEHGSTSSNKGGYRFMPSIAHD---------- 368

Query: 243 SSDQLKDLMESIEKEYVLINSHFASTDGFSFYLDASLQDNSMAKVSI-CPSKKNDHSAIT 301
             D + D MESIEK YVL+N+HFAS +  S  L+ SLQDN  A+ +I  P+K ++  A+ 
Sbjct: 369 --DPIADSMESIEKGYVLVNAHFASMETLSSSLETSLQDNPAARATIYSPNKNDEDVAVA 426

Query: 302 MQTKDMPSDSASGAENSLFHVPAPLETSNRLFILKEVQGLTVLHPSTGLQLLHQYVHALT 361
           M+T ++ + S    E+   + P P   S    ILKE Q L+VLH S  L LLH+Y HA++
Sbjct: 427 MKTTELTATSVGAVESPGNYEPDPSTPSCASTILKEDQELSVLHSSRRLHLLHKYAHAIS 486

Query: 362 ELAEAKYDAGLFLESFSVELVVLAIWKKALQICGSWLTSMSHGELPGPSSAYGHTPVQGG 421
           +LA+ K   G FLESFSVELVVLAIWKKA+Q+C SWL S +  +LP  SS     PVQ  
Sbjct: 487 KLAQEKLKDGQFLESFSVELVVLAIWKKAVQVCSSWLASTAGSDLPETSSTNESAPVQ-- 544

Query: 422 ISSDPNSENNVDFSSPFSVSTWAEQGFILAFDRAEKLSYNIRDSDGAAEMPDAMEIIYQR 481
                          P SVS   E  FI A D AEKLS +++D DG ++MPDAMEII+Q 
Sbjct: 545 --------------EPSSVSILVESEFIAACDHAEKLSSHLQDMDGNSKMPDAMEIIFQA 590

Query: 482 ALSVGKIGAVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGY 541
           AL+ GK GAV+EYM NK SA+ALYSKAMLLLSFIVGEA  L L PPFSL P++K RIQ Y
Sbjct: 591 ALAFGKSGAVDEYMENKGSAAALYSKAMLLLSFIVGEATLLPLNPPFSLTPANKHRIQRY 650

Query: 542 INNLQSHQSNFLIFQ 556
           I  L+SH + F I Q
Sbjct: 651 IIYLESHLTRFQISQ 665

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356522466|ref|XP_003529867.1| PREDICTED: serine/threonine-protein kinase ATG1-like [Glycine max]

 Score =  528 bits (1360), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 282/539 (52%), Positives = 367/539 (68%), Gaps = 14/539 (2%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QNLL++T   TPV+KIGDFGFARSLTPQ LADTLCGSP YMAPEII+N KYDAKADLWSV
Sbjct: 140 QNLLLATTAATPVMKIGDFGFARSLTPQGLADTLCGSPYYMAPEIIENQKYDAKADLWSV 199

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           GAIL+QLV G+PPFDG++QLQLFQNIL STEL FPP A++ LH DC+DLCR LLR+NP E
Sbjct: 200 GAILYQLVIGRPPFDGNSQLQLFQNILASTELHFPPDALKVLHSDCLDLCRNLLRRNPDE 259

Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSK 193
           R+TFK FFNH FL E R T++ EQ  +    +     L  ST E     HS++       
Sbjct: 260 RLTFKAFFNHNFLREPRPTMNVEQFQLHQSERLTNHQLGGSTSEKISESHSKY------- 312

Query: 194 NPKSACSSACDKVILNTGDQGNSLSTRDL--HEFIPNMACDRMKKSV--GSQYSSD-QLK 248
           NP    S+A + ++L   D   +  T +       P +A D++ K+V  G+  S+  ++ 
Sbjct: 313 NPMVVSSAADETMLLQRKDGKITAGTTNAKGKGSTPTIASDKLGKAVDAGAHLSNQPRVS 372

Query: 249 DLMESIEKEYVLINSHFASTDGFSFYLDASLQDNSMAKVSICPSKKNDHSAI-TMQTKDM 307
            LMESIEK+YV +NSHFAS + FS Y +AS+QD+S  ++S+ PSK+ +       QTKD+
Sbjct: 373 HLMESIEKDYVFVNSHFASLEAFSDYFEASVQDSSSHRISLFPSKRTNMEVRDAKQTKDL 432

Query: 308 PSDSASGAENSLFHVPAPLETSNRLFILKEVQGLTVLHPSTGLQLLHQYVHALTELAEAK 367
           PS S  G EN   +       S     L++   ++ LHPS  LQLLHQYV  + EL++ K
Sbjct: 433 PSSSTEGLENLKSNKLEACAASCEFAALRKEHQISPLHPSNRLQLLHQYVQIIAELSQEK 492

Query: 368 YDAGLFLESFSVELVVLAIWKKALQICGSWLTSMSHGELPGPSSAYGHTPVQGGISSDPN 427
           Y+ GL+LES +VELVVLAIWK+ L+IC SW+ S++  ELPG SSA      +  I+   +
Sbjct: 493 YNTGLYLESLAVELVVLAIWKQTLEICSSWMASITKSELPGSSSANESISAR-DINLPQS 551

Query: 428 SENNVDFSSPFSVSTWAEQGFILAFDRAEKLSYNIRDSDGAAEMPDAMEIIYQRALSVGK 487
           +E  ++FS P S+S WA+  FI A DRAEKLS ++++ D A EMPDAMEII+Q+AL +G 
Sbjct: 552 TEQKINFSDPSSISLWAKHEFIDAVDRAEKLSCHVQNMDKATEMPDAMEIIFQKALLIGT 611

Query: 488 IGAVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQ 546
            GAV+EYM  +  A+A YSKAMLLLSFIV EA +L L PPFSL  ++K+RI  YI++LQ
Sbjct: 612 SGAVDEYMEIRDRAAASYSKAMLLLSFIVAEAENLPLNPPFSLVATNKERISQYIHSLQ 670

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356560221|ref|XP_003548392.1| PREDICTED: serine/threonine-protein kinase ATG1-like [Glycine max]

 Score =  520 bits (1340), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 280/536 (52%), Positives = 358/536 (66%), Gaps = 11/536 (2%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QNLL++T   TPV+KIGDFGFARSLTPQ LADTLCGSP YMAPEII+N KYDAKADLWSV
Sbjct: 139 QNLLLATTAATPVMKIGDFGFARSLTPQGLADTLCGSPYYMAPEIIENQKYDAKADLWSV 198

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           GAIL+QLV G+PPFDG++QLQLFQNIL STEL FPP A++ LH DC+DLCR LLR+NP E
Sbjct: 199 GAILYQLVIGRPPFDGNSQLQLFQNILASTELHFPPDALKVLHSDCLDLCRNLLRRNPDE 258

Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSK 193
           R+TFK FFNH FL E R TV+ EQ  +    +     L  S  E     HS++       
Sbjct: 259 RLTFKAFFNHNFLREPRPTVNVEQFQLHQSERLTDHQLGVSASEKISQSHSKYHV---VD 315

Query: 194 NPKSACSSACDKVILNTGDQGNSLSTRDLHEFIPNMACDRMKKSVGSQYSSDQLKDLMES 253
           NP    S+A + ++L   D   +  T+      P +A D++ K+V      D +  LMES
Sbjct: 316 NPVVVSSAADETMLLQRKDGKITAGTKSAKGSTPTIASDKLGKAV------DAVSHLMES 369

Query: 254 IEKEYVLINSHFASTDGFSFYLDASLQDNSMAKVSICPSKK-NDHSAITMQTKDMPSDSA 312
           IEK+YV +NSHFAS + FS Y +AS+Q+ S  ++S+  SK+ N       QTKD+P  S 
Sbjct: 370 IEKDYVFVNSHFASFEAFSDYFEASVQNISSHRISLFSSKRTNMEVGHAKQTKDLPFSST 429

Query: 313 SGAENSLFHVPAPLETSNRLFILKEVQGLTVLHPSTGLQLLHQYVHALTELAEAKYDAGL 372
              EN   +       S     L++  G++ L PS  LQLLHQYV  L EL++ KY+ GL
Sbjct: 430 EVLENLKSNKQEACVASCEFAALRKENGISSLLPSNRLQLLHQYVRILAELSQEKYNTGL 489

Query: 373 FLESFSVELVVLAIWKKALQICGSWLTSMSHGELPGPSSAYGHTPVQGGISSDPNSENNV 432
           +LES +VELVVLAIWKK L+IC  W+ S++  ELPG SSA   +     +    ++E  +
Sbjct: 490 YLESLAVELVVLAIWKKTLEICSFWMASITKSELPGSSSA-NESISASDVDLPQSTEQKI 548

Query: 433 DFSSPFSVSTWAEQGFILAFDRAEKLSYNIRDSDGAAEMPDAMEIIYQRALSVGKIGAVE 492
           +FS P S+S WA+  FI A DRAEKLS ++++ D AAEMPDAMEII+Q+AL +G  GAV+
Sbjct: 549 NFSDPSSISLWAKHEFIDAVDRAEKLSCHVQNMDRAAEMPDAMEIIFQKALLIGTSGAVD 608

Query: 493 EYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQSH 548
           EYM  +  A+A YSKAMLLLSFIV EA +L L PPFSL  ++K+RI  YI++LQS 
Sbjct: 609 EYMEIRDRAAASYSKAMLLLSFIVTEAENLPLNPPFSLVSTNKERILQYIHSLQSR 664

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297821080|ref|XP_002878423.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297324261|gb|EFH54682.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 264/543 (48%), Positives = 343/543 (63%), Gaps = 56/543 (10%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QNLL+S+ EVTP+LKIGDFGFARSLTP+ +A+T CGSPLYMAPEII+N KYDAKADLWS 
Sbjct: 136 QNLLLSSKEVTPLLKIGDFGFARSLTPESMAETFCGSPLYMAPEIIRNQKYDAKADLWSA 195

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           GAILFQLVTGKPPFDG+N +QLF NI+  TEL+FP  A  E+HPDCVDLCR LLR+NP+E
Sbjct: 196 GAILFQLVTGKPPFDGNNHIQLFHNIVRDTELKFPEDARNEIHPDCVDLCRSLLRRNPIE 255

Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSK 193
           R+TF+EFFNH+FL E RQ              P V    S+T   + SL S  P+ S+++
Sbjct: 256 RLTFREFFNHKFLREPRQM-------------PDVVHSGSTTSTGKSSLPSAQPSTSTNR 302

Query: 194 NPKSACSSACDKVILNTGDQGNSLSTRDLHEFIPNMACDRMKKSVGSQYSSDQ--LKDLM 251
              SA          N    G+S S  +    +P+++ ++ +K    Q SS+Q  + D +
Sbjct: 303 FKSSAD---------NVHKHGSSSSAPNSQILMPHISFEKTRKDTEGQCSSNQSGVVDSL 353

Query: 252 ESIEKEYVLINSHFASTDGFSFYLDASLQDNSMAKVSICPSKKNDHSAITMQTKDMPSDS 311
           E IE+EYVL+N   AS +G S + D SLQD+    +              +   +  S S
Sbjct: 354 ELIEREYVLVNRPSASLEGSSDFFDTSLQDSGFPNI--------------LPRNEKVSSS 399

Query: 312 ASGAENSLFHVPAPLETSNRLFILKEVQGLTVLHPSTGLQLLHQYVHALTELAEAKYDAG 371
           +  A+  L  V  P  TS   ++L EVQ LT++HP T LQLLHQY  ALTELA    + G
Sbjct: 400 SLEAQRPLSDVSGPRPTSGS-YLLTEVQRLTIVHPPTKLQLLHQYAQALTELAREMGNTG 458

Query: 372 LFLESFSVELVVLAIWKKALQICGSWLTSMSHGEL-PGPSSAYGHTPVQGGISSDPNSEN 430
              ESF+V LVVLA+W+KAL+IC SW+ S+   ++ P P++A                E 
Sbjct: 459 QVKESFAVTLVVLAVWRKALEICDSWMISVGENKVNPDPTTA---------------PEF 503

Query: 431 NV-DFSSPFSVSTWAEQGFILAFDRAEKLSYNIRDSDGAAEMPDAMEIIYQRALSVGKIG 489
           ++ D +SP S  TW  Q F+ AF++AE  S  + ++  A  MPDAME IY+RAL+ GK G
Sbjct: 504 SIPDLNSPASAKTWVTQEFVTAFNQAENSSTQLNETSAATHMPDAMETIYERALAYGKSG 563

Query: 490 AVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQSHQ 549
             EEY+ NK SA+ LY KA+LLLSFI+ EA +LSL PPFSL P DKKRI  YI+NLQ  +
Sbjct: 564 GAEEYLSNKESAATLYKKAILLLSFIIEEAVTLSLNPPFSLTPDDKKRILYYISNLQHRR 623

Query: 550 SNF 552
           S+ 
Sbjct: 624 SHL 626

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18412205|ref|NP_567122.1| protein kinase family protein [Arabidopsis thaliana] gi|14334752|gb|AAK59554.1| putative serine/threonine-protein kinase [Arabidopsis thaliana] gi|332646764|gb|AEE80285.1| protein kinase family protein [Arabidopsis thaliana]

 Score =  467 bits (1201), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 263/543 (48%), Positives = 337/543 (62%), Gaps = 56/543 (10%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QNLL+S+ EVTP+LKIGDFGFARSLTP+ +A+T CGSPLYMAPEII+N KYDAKADLWS 
Sbjct: 136 QNLLLSSKEVTPLLKIGDFGFARSLTPESMAETFCGSPLYMAPEIIRNQKYDAKADLWSA 195

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           GAILFQLVTGKPPFDG+N +QLF NI+  TEL+FP     E+HPDCVDLCR LLR+NP+E
Sbjct: 196 GAILFQLVTGKPPFDGNNHIQLFHNIVRDTELKFPEDTRNEIHPDCVDLCRSLLRRNPIE 255

Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSK 193
           R+TF+EFFNH FL E RQ              P VE    ST   +  L S  P+ S+++
Sbjct: 256 RLTFREFFNHMFLREPRQI-------------PDVEHSGFSTCTGKSLLPSAQPSTSTNR 302

Query: 194 NPKSACSSACDKVILNTGDQGNSLSTRDLHEFIPNMACDRMKKSVGSQYSSDQ--LKDLM 251
              SA          N    G+S S  +    +P+ + ++ +K    Q SS+Q  + D +
Sbjct: 303 FKSSA---------ENVHKHGSSSSASNSQISMPHTSFEKTRKDTEGQCSSNQSGVVDSL 353

Query: 252 ESIEKEYVLINSHFASTDGFSFYLDASLQDNSMAKVSICPSKKNDHSAITMQTKDMPSDS 311
           E IE+EYVL+N   AS +G S   D SLQD+     +I P  +N+  + +      P   
Sbjct: 354 ELIEREYVLVNRPSASLEGSSDCFDTSLQDSGFP--NILP--RNEKVSSSSLEAQKPLSD 409

Query: 312 ASGAENSLFHVPAPLETSNRLFILKEVQGLTVLHPSTGLQLLHQYVHALTELAEAKYDAG 371
            SG        P P   S   ++L EVQ LT++HP T LQLLHQY  ALTELA    + G
Sbjct: 410 VSG--------PRPASVS---YLLTEVQRLTIVHPPTKLQLLHQYAQALTELASEMGNTG 458

Query: 372 LFLESFSVELVVLAIWKKALQICGSWLTSMSHGEL-PGPSSAYGHTPVQGGISSDPNSEN 430
              ESF+V LVVLA+W+KAL+IC SW+ S+   E+ P P++A                E 
Sbjct: 459 QVKESFAVTLVVLAVWRKALEICDSWMMSVGENEVNPDPTTA---------------PET 503

Query: 431 NV-DFSSPFSVSTWAEQGFILAFDRAEKLSYNIRDSDGAAEMPDAMEIIYQRALSVGKIG 489
           ++ D +SP    TW  Q F+ A ++AE LS  + ++  A  MPDAME IY+RAL+ GK G
Sbjct: 504 SIPDLNSPAPAKTWVTQEFVTALNQAENLSTQLNETSAATHMPDAMETIYERALAYGKSG 563

Query: 490 AVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQSHQ 549
             EEY+ NK SA+ LY KA+LLLSFI+ EA +LSL P FSL P DKKRI  YI+NLQ  +
Sbjct: 564 GAEEYLSNKESAATLYKKAILLLSFIIEEAVTLSLNPSFSLTPDDKKRILYYISNLQHRR 623

Query: 550 SNF 552
           S+ 
Sbjct: 624 SHL 626

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449445752|ref|XP_004140636.1| PREDICTED: serine/threonine-protein kinase atg1-like [Cucumis sativus] gi|449520195|ref|XP_004167119.1| PREDICTED: serine/threonine-protein kinase atg1-like [Cucumis sativus]

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 268/576 (46%), Positives = 364/576 (63%), Gaps = 67/576 (11%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QNLL+S+ E TP+LKIGDFGFARSL  Q LADTLCGSPLYMAPEI+ N KYDAKADLWSV
Sbjct: 143 QNLLLSSKEGTPLLKIGDFGFARSLANQTLADTLCGSPLYMAPEIMNNRKYDAKADLWSV 202

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           GAI +QL+TGK P+ G++  QLFQNI  STEL+FP GA+E LHPD V+LCR LLRQNPVE
Sbjct: 203 GAIFYQLLTGKLPYSGNHPAQLFQNISESTELKFPKGALEVLHPDAVNLCRSLLRQNPVE 262

Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSK 193
           R++F EFF+H++  E R        +   ET P+V+ L +   E     H E P  SS++
Sbjct: 263 RLSFTEFFDHKYFQEPRS-------NQAVETTPVVQSLEAEKVES----HLEQPIESSNR 311

Query: 194 NPKSACSSACDKV-------------------------------ILNTGDQGNSLSTRDL 222
           + ++  S+  ++                                 ++ G    SL     
Sbjct: 312 DSETTSSTVRNRTSRGKNIGSSVREQLIEPSNIAAEITSSSVHSSISKGKNICSLVREQP 371

Query: 223 HEFIPNMACDRMKKSVGS-QYSSDQLK--DLMESIEKEYVLINSHFASTDGFS-FYLDAS 278
            E I N+  D ++KS+   Q+S +Q++  D M+SIEK+YVL+N+H  S +  S +YL+ S
Sbjct: 372 IEPILNLGLDELRKSLDCIQHSLNQIEVSDSMDSIEKDYVLVNAHCPSMEETSSYYLEPS 431

Query: 279 LQDN-------SMAKVSICPSKKNDHSAITMQTKDMPSDSASGAENSLFHVPAPLETSNR 331
           LQ +       ++ +  I  ++K D  A    T+D+   S S  + S+    +       
Sbjct: 432 LQGSLRVSHAFNIDQDMIAKTQKKDFVA---STRDIGESSRSLDQFSMARAAS------- 481

Query: 332 LFILKEVQGLTVLHPSTGLQLLHQYVHALTELAEAKYDAGLFLESFSVELVVLAIWKKAL 391
             +L+EVQGL++LHPST LQL +QY+H L++L++ K +AG+FLESFSVELV LA+WK+A+
Sbjct: 482 --MLREVQGLSILHPSTRLQLFNQYLHVLSDLSQEKCNAGMFLESFSVELVALALWKEAV 539

Query: 392 QICGSWLTSMSHGELPGPSSAYGHTPVQGGISSDPNSENNVDFSSPFSVSTWAEQGFILA 451
           +I G+WL+S    E    S     T  Q       N E NVDF+ P SVS WA+ GFI A
Sbjct: 540 EISGTWLSSSDKRESSKTSLGIDSTTPQKDADYAANDEGNVDFNRPSSVSKWAQLGFIAA 599

Query: 452 FDRAEKLSYNIRDSDGAAEMPDAMEIIYQRALSVGKIGAVEEYMGNKASASALYSKAMLL 511
            DR EKLS NI++ DGA  +PDAMEII+Q+A+++GK GAV++YM NK +A+A YSKA+LL
Sbjct: 600 VDRTEKLSQNIQEIDGATVIPDAMEIIFQKAIALGKSGAVDQYMENKDNAAASYSKAILL 659

Query: 512 LSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQS 547
            SFI+GEA SL+   PFSL   +K+RIQ YI+ LQ+
Sbjct: 660 FSFILGEAESLN--SPFSLTSPNKQRIQHYIHYLQT 693

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	568
TAIR|locus:2079527	626	AT3G61960 [Arabidopsis thalian	0.304	0.276	0.637	1.5e-110
TAIR|locus:2065680	733	AT2G37840 [Arabidopsis thalian	0.241	0.186	0.705	1.3e-76
TAIR|locus:2084440	712	AT3G53930 [Arabidopsis thalian	0.235	0.188	0.681	1.2e-75
TAIR|locus:2028496	408	AT1G49180 [Arabidopsis thalian	0.239	0.333	0.453	6.9e-30
CGD|CAL0002062	834	orf19.3841 [Candida albicans (	0.279	0.190	0.435	1.1e-29
POMBASE|SPCC63.08c	830	atg1 "autophagy and CVT pathwa	0.204	0.139	0.521	4.8e-29
ASPGD|ASPL0000050146	935	AN1632 [Emericella nidulans (t	0.286	0.174	0.431	1.7e-28
SGD|S000003148	897	ATG1 "Protein kinase required	0.399	0.253	0.344	2.1e-27
DICTYBASE|DDB_G0292390	668	atg1 "ULK family protein kinas	0.225	0.191	0.443	3.9e-27
UNIPROTKB|Q52EB3	982	ATG1 "Serine/threonine-protein	0.274	0.158	0.426	1.1e-26

TAIR|locus:2079527 AT3G61960 [Arabidopsis thaliana (taxid:3702)]

 Score = 581 (209.6 bits), Expect = 1.5e-110, Sum P(2) = 1.5e-110
 Identities = 111/174 (63%), Positives = 132/174 (75%)

Query:    14 QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
             QNLL+S+ EVTP+LKIGDFGFARSLTP+ +A+T CGSPLYMAPEII+N KYDAKADLWS 
Sbjct:   136 QNLLLSSKEVTPLLKIGDFGFARSLTPESMAETFCGSPLYMAPEIIRNQKYDAKADLWSA 195

Query:    74 GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
             GAILFQLVTGKPPFDG+N +QLF NI+  TEL+FP     E+HPDCVDLCR LLR+NP+E
Sbjct:   196 GAILFQLVTGKPPFDGNNHIQLFHNIVRDTELKFPEDTRNEIHPDCVDLCRSLLRRNPIE 255

Query:   134 RITFKEFFNHRFLGELRQTVHAEQHSVVPET-KPMVELLNSSTPEDRHSLHSEH 186
             R+TF+EFFNH FL E RQ    E       T K ++     ST  +R    +E+
Sbjct:   256 RLTFREFFNHMFLREPRQIPDVEHSGFSTCTGKSLLPSAQPSTSTNRFKSSAEN 309

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2065680 AT2G37840 [Arabidopsis thaliana (taxid:3702)]

 Score = 497 (180.0 bits), Expect = 1.3e-76, Sum P(2) = 1.3e-76
 Identities = 98/139 (70%), Positives = 115/139 (82%)

Query:    14 QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
             QNLL+STNE    LKI DFGFARSL P+ LA+TLCGSPLYMAPEI+Q  KYDAKADLWSV
Sbjct:   138 QNLLLSTNENDADLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSV 197

Query:    74 GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
             GAILFQLVTG+ PF G++Q+QL QNI+ STEL FP G   +L  DC+DLC+ LLR+NPVE
Sbjct:   198 GAILFQLVTGRTPFTGNSQIQLLQNIIRSTELHFP-GDCRDLSLDCIDLCQKLLRRNPVE 256

Query:   134 RITFKEFFNHRFLGELRQT 152
             R+TF+EFFNH FL + RQ+
Sbjct:   257 RLTFEEFFNHPFLSD-RQS 274

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2084440 AT3G53930 [Arabidopsis thaliana (taxid:3702)]

 Score = 477 (173.0 bits), Expect = 1.2e-75, Sum P(3) = 1.2e-75
 Identities = 92/135 (68%), Positives = 110/135 (81%)

Query:    14 QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
             QNLL+ST++    LKI DFGFARSL P+ LA+TLCGSPLYMAPEI+Q  KYDAKADLWSV
Sbjct:   146 QNLLLSTDDNDAALKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSV 205

Query:    74 GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
             GAILFQLVTG+ PF G++Q+QL QNI+ STEL FP     +L  DC DLC+ LLR+NPVE
Sbjct:   206 GAILFQLVTGRTPFTGNSQIQLLQNIIRSTELHFPADC-RDLSTDCKDLCQKLLRRNPVE 264

Query:   134 RITFKEFFNHRFLGE 148
             R+TF+EFF+H FL +
Sbjct:   265 RLTFEEFFHHPFLSD 279

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2028496 AT1G49180 [Arabidopsis thaliana (taxid:3702)]

 Score = 335 (123.0 bits), Expect = 6.9e-30, P = 6.9e-30
 Identities = 63/139 (45%), Positives = 93/139 (66%)

Query:    14 QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
             +N+L+  +    VLKI DF  AR L P    +T+CGSP YMAPE++Q  +Y+ KAD+WSV
Sbjct:   133 ENILIDGSGDDLVLKIADFSLARKLHPGKYLETVCGSPFYMAPEVLQFQRYNEKADMWSV 192

Query:    74 GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
             GAILF+L+ G PPF G+N +Q+ +NI +ST L F    ++++HPDC+D+C  LL  NP  
Sbjct:   193 GAILFELLHGYPPFRGNNNVQVLRNIKSSTALPFSRLILQQMHPDCIDVCSRLLSINPAA 252

Query:   134 RITFKEFFNHRFLGELRQT 152
              +  ++F    FLG ++ +
Sbjct:   253 TLGIEDF---PFLGRIKNS 268

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

CGD|CAL0002062 orf19.3841 [Candida albicans (taxid:5476)]

 Score = 343 (125.8 bits), Expect = 1.1e-29, Sum P(3) = 1.1e-29
 Identities = 71/163 (43%), Positives = 100/163 (61%)

Query:    25 PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
             P+LKI DFGFAR L    +A+TLCGSPLYMAPEI++  KY+AKADLWSVGA+L+++  GK
Sbjct:   234 PILKIADFGFARFLPSTSMAETLCGSPLYMAPEILRYEKYNAKADLWSVGAVLYEMTVGK 293

Query:    85 PPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
             PPF   N ++L +NI  + + ++FP  A  ++      L R LL+ NP ERI+F EFFN 
Sbjct:   294 PPFKAGNHIELLKNIEKANDKIKFPSAA--QVPEPLKQLIRSLLKYNPTERISFNEFFND 351

Query:   144 RFLG-ELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSE 185
               +  +L       + S + E   + E ++   P +R     E
Sbjct:   352 SLITCDLDDNDQPLETSQMDENLFISEYISPIAPAERSQFFKE 394

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0000407 "pre-autophagosomal structure" evidence=IEA

GO:0034273 "Atg1p signaling complex" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0032258 "CVT pathway" evidence=IEA

GO:0000747 "conjugation with cellular fusion" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0000422 "mitochondrion degradation" evidence=IEA

GO:0034727 "piecemeal microautophagy of nucleus" evidence=IEA

GO:0006995 "cellular response to nitrogen starvation" evidence=IEA

GO:0000045 "autophagic vacuole assembly" evidence=IEA

POMBASE|SPCC63.08c atg1 "autophagy and CVT pathway serine/threonine protein kinase Atg1" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 330 (121.2 bits), Expect = 4.8e-29, Sum P(2) = 4.8e-29
 Identities = 62/119 (52%), Positives = 84/119 (70%)

Query:    25 PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
             P+LK+ DFGFAR L    +A+TLCGSPLYMAPEI++  KYDAKADLWSVGA+L+++  GK
Sbjct:   187 PMLKLADFGFARYLQTSSMAETLCGSPLYMAPEILRYEKYDAKADLWSVGAVLYEMAVGK 246

Query:    85 PPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
             PPF   N ++L + I  + + ++FP  A   +HPD   L   LL+QNP +RI +  FF+
Sbjct:   247 PPFKAPNHVELLRRIQKAKDVIKFPEEAF--IHPDIKTLICALLKQNPADRIDYDGFFS 303

GO:0000747 "conjugation with cellular fusion" evidence=IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=ISM

GO:0005634 "nucleus" evidence=IDA

GO:0005829 "cytosol" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=ISM

GO:0006914 "autophagy" evidence=IMP

GO:0006995 "cellular response to nitrogen starvation" evidence=IMP

GO:0007165 "signal transduction" evidence=IC

GO:0016236 "macroautophagy" evidence=IC

GO:0016239 "positive regulation of macroautophagy" evidence=ISO

GO:0032258 "CVT pathway" evidence=NAS

ASPGD|ASPL0000050146 AN1632 [Emericella nidulans (taxid:162425)]

 Score = 337 (123.7 bits), Expect = 1.7e-28, Sum P(3) = 1.7e-28
 Identities = 72/167 (43%), Positives = 104/167 (62%)

Query:    22 EVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV 81
             E  P+LK+ DFGFARSL    LA+TLCGSPLYMAPEI++  KYDAKADLWSVG +L+++V
Sbjct:   209 ETLPLLKLADFGFARSLPATSLAETLCGSPLYMAPEILRYEKYDAKADLWSVGTVLYEMV 268

Query:    82 TGKPPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF 140
              GKPPF  +N ++L + I T+ + ++FP         D   L R LL+ NPV R+TF +F
Sbjct:   269 VGKPPFRATNHVELLRKIETARDRIKFPEE--NPASDDIKALVRGLLKFNPVVRMTFADF 326

Query:   141 FNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHP 187
             F +  +      + AE   + P+  P  E++ + + E +    + +P
Sbjct:   327 FENDIITGPIPGLAAEDVPI-PDRPPSPEVIPTESAEPQSVSDTIYP 372

GO:0032258 "CVT pathway" evidence=IEA

GO:0000747 "conjugation with cellular fusion" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0000422 "mitochondrion degradation" evidence=IEA

GO:0034727 "piecemeal microautophagy of nucleus" evidence=IEA

GO:0006995 "cellular response to nitrogen starvation" evidence=IEA

GO:0000045 "autophagic vacuole assembly" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005829 "cytosol" evidence=IEA

GO:0034273 "Atg1p signaling complex" evidence=IEA

GO:0000407 "pre-autophagosomal structure" evidence=IEA

GO:0005776 "autophagic vacuole" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

SGD|S000003148 ATG1 "Protein kinase required for vesicle formation in autophagy and CVT" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 317 (116.6 bits), Expect = 2.1e-27, Sum P(3) = 2.1e-27
 Identities = 82/238 (34%), Positives = 125/238 (52%)

Query:    25 PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
             P+LKI DFGFAR L    LA+TLCGSPLYMAPEI+   KY+AKADLWSVG ++F++  G 
Sbjct:   205 PILKIADFGFARFLPNTSLAETLCGSPLYMAPEILNYQKYNAKADLWSVGTVVFEMCCGT 264

Query:    85 PPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
             PPF  SN L+LF+ I  + + + FP      + P+  +L   LL  +P +RI F+EFF +
Sbjct:   265 PPFRASNHLELFKKIKRANDVITFPSYC--NIEPELKELICSLLTFDPAQRIGFEEFFAN 322

Query:   144 RFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTXXXXXXXXXXXXXXX 203
             + + E   +   E    +PE +   + +  S       L S+ P                
Sbjct:   323 KVVNEDLSSYELEDD--LPELESKSKGIVESNMFVSEYL-SKQPKSPNSNLAGHQSMAD- 378

Query:   204 DKVILNTGDQGNSLSTRDLHEFIPNMACDRMKKSVGSQYSSDQLKDLMESIEKEYVLI 261
             +   L+   + +++ T    +     A D  KK+  ++Y +  + D   S E+EYV++
Sbjct:   379 NPAELSDALKNSNILTAPAVKTDHTQAVD--KKASNNKYHNSLVSD--RSFEREYVVV 432

GO:0016310 "phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IMP;IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;IMP;IDA

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0000407 "pre-autophagosomal structure" evidence=IDA

GO:0032258 "CVT pathway" evidence=IMP

GO:0000422 "mitochondrion degradation" evidence=IMP

GO:0006914 "autophagy" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0000045 "autophagic vacuole assembly" evidence=IMP

GO:0034273 "Atg1p signaling complex" evidence=IPI

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0034045 "pre-autophagosomal structure membrane" evidence=IEA

GO:0005829 "cytosol" evidence=IDA

DICTYBASE|DDB_G0292390 atg1 "ULK family protein kinase" [Dictyostelium discoideum (taxid:44689)]

 Score = 302 (111.4 bits), Expect = 3.9e-27, Sum P(3) = 3.9e-27
 Identities = 59/133 (44%), Positives = 89/133 (66%)

Query:    14 QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
             QNLL+S +   P+LKIGDFGFA+ + P  L+DT CGSPLYMAPEI+    Y  KADLWSV
Sbjct:   139 QNLLLSDDSEHPILKIGDFGFAKFIDPFSLSDTFCGSPLYMAPEILHRKNYTVKADLWSV 198

Query:    74 GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
             G IL++++ G+P ++  +   L  N L + +++ P      +  DC +L   LL+ +  +
Sbjct:   199 GIILYEMLVGEPAYNSGSVPDLL-NQLQNKKIKLP----SHISSDCQNLIYSLLQIDVEK 253

Query:   134 RITFKEFFNHRFL 146
             RI++++FFNH++L
Sbjct:   254 RISWEDFFNHKWL 266

GO:0070265 "necrotic cell death" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0016236 "macroautophagy" evidence=IMP

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0031288 "sorocarp morphogenesis" evidence=IMP

GO:0030587 "sorocarp development" evidence=IMP

GO:0030435 "sporulation resulting in formation of a cellular spore" evidence=IMP

GO:0006995 "cellular response to nitrogen starvation" evidence=IMP

GO:0005737 "cytoplasm" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0048102 "autophagic cell death" evidence=IMP

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0006914 "autophagy" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0034045 "pre-autophagosomal structure membrane" evidence=IEA

UNIPROTKB|Q52EB3 ATG1 "Serine/threonine-protein kinase ATG1" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 332 (121.9 bits), Expect = 1.1e-26, Sum P(2) = 1.1e-26
 Identities = 70/164 (42%), Positives = 102/164 (62%)

Query:    25 PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
             P+LK+ DFGFAR L    LA+TLCGSPLYMAPEI++  +YDAKADLWSVG +LF+++ G+
Sbjct:   204 PMLKLADFGFARVLPSTSLAETLCGSPLYMAPEILRYERYDAKADLWSVGTVLFEMIVGR 263

Query:    85 PPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
             PPF  SN ++L + I  + + ++FP      +  +   L R LL++NPVERI+F+ FF H
Sbjct:   264 PPFRASNHVELLRKIEAAEDVIKFPRETT--ISSEMKGLTRALLKRNPVERISFENFFAH 321

Query:   144 RFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHP 187
               +     ++       +P  KP      SS+ + R +  S+ P
Sbjct:   322 PVI---ISSIPGLVEDDIP--KPEASEQRSSSKDTRAASKSDDP 360

GO:0004674 "protein serine/threonine kinase activity" evidence=IMP

GO:0005575 "cellular_component" evidence=ND

GO:0009405 "pathogenesis" evidence=IMP

GO:0009847 "spore germination" evidence=IMP

GO:0044409 "entry into host" evidence=IMP

GO:0048102 "autophagic cell death" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	LOW CONFIDENCE prediction!
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: eugene3.00140523 hypothetical protein (673 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	568
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	9e-42
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	7e-37
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-34
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-31
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	2e-27
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-26
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	2e-25
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-25
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-23
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-23
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	4e-23
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	4e-23
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-21
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	5e-21
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	2e-20
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-20
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-20
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	7e-20
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	9e-20
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-19
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	2e-19
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	8e-19
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	8e-19
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-18
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	2e-18
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-18
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	7e-18
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-17
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-17
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	2e-17
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	4e-17
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	4e-17
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	5e-17
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	6e-17
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	6e-17
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	6e-17
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	8e-17
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	1e-16
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-16
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-16
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	3e-16
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	4e-16
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	4e-16
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	5e-16
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	5e-16
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	5e-16
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	6e-16
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	6e-16
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	7e-16
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	7e-16
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-15
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	1e-15
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	2e-15
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-15
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	2e-15
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	2e-15
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-15
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-15
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	3e-15
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-15
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	3e-15
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	3e-15
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	3e-15
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	4e-15
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	6e-15
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	7e-15
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	1e-14
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-14
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	1e-14
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-14
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	2e-14
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	3e-14
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-14
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	4e-14
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	6e-14
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	8e-14
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	8e-14
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	1e-13
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	1e-13
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-13
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-13
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	2e-13
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	3e-13
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	3e-13
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	3e-13
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	3e-13
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	3e-13
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	3e-13
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	3e-13
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-13
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-13
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	4e-13
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	4e-13
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	5e-13
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	6e-13
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	7e-13
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	8e-13
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	1e-12
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	1e-12
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	1e-12
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	2e-12
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	2e-12
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	2e-12
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-12
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	2e-12
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	3e-12
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	3e-12
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	4e-12
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	4e-12
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	5e-12
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	5e-12
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	6e-12
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	1e-11
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-11
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	2e-11
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-11
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-11
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	3e-11
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	3e-11
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	3e-11
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	3e-11
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	3e-11
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	3e-11
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	4e-11
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	4e-11
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	6e-11
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	6e-11
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	7e-11
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	9e-11
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	1e-10
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	2e-10
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	2e-10
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-10
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-10
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	3e-10
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-10
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	3e-10
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	3e-10
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	3e-10
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	3e-10
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	3e-10
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	4e-10
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	4e-10
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	4e-10
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	5e-10
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	5e-10
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	6e-10
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	6e-10
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	7e-10
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	9e-10
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-09
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	1e-09
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	1e-09
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	2e-09
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	2e-09
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-09
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	2e-09
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	3e-09
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	4e-09
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	4e-09
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	4e-09
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	4e-09
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	5e-09
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	6e-09
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	8e-09
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	8e-09
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	9e-09
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	9e-09
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	9e-09
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	1e-08
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-08
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-08
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	2e-08
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	2e-08
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	2e-08
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-08
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	2e-08
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	3e-08
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	3e-08
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	3e-08
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	3e-08
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	5e-08
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	5e-08
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	5e-08
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	7e-08
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	7e-08
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	9e-08
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	9e-08
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	9e-08
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	1e-07
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	1e-07
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-07
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	2e-07
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	2e-07
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	2e-07
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	4e-07
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	4e-07
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	4e-07
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	5e-07
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	5e-07
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	5e-07
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	5e-07
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	6e-07
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	7e-07
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	8e-07
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	8e-07
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	9e-07
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	9e-07
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	1e-06
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	2e-06
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	2e-06
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	2e-06
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	2e-06
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	2e-06
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	2e-06
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	2e-06
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-06
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-06
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-06
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	3e-06
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	3e-06
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	3e-06
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	3e-06
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	4e-06
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	4e-06
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	4e-06
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	4e-06
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	4e-06
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	5e-06
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	6e-06
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	8e-06
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	8e-06
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	1e-05
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	1e-05
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	1e-05
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	1e-05
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	2e-05
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-05
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-05
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	2e-05
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-05
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	2e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	2e-05
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	2e-05
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-05
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	2e-05
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	2e-05
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	3e-05
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	3e-05
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	3e-05
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	4e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	4e-05
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-05
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	5e-05
cd05115	257	cd05115, PTKc_Zap-70, Catalytic domain of the Prot	6e-05
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	6e-05
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	7e-05
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	7e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	8e-05
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	9e-05
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	9e-05
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	9e-05
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	1e-04
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	1e-04
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-04
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-04
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	2e-04
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	2e-04
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	3e-04
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	4e-04
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	5e-04
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	5e-04
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	5e-04
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	6e-04
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	6e-04
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	0.001
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	0.001
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	0.002
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	0.002
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	0.002
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	0.002

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  150 bits (382), Expect = 9e-42
 Identities = 50/133 (37%), Positives = 76/133 (57%), Gaps = 4/133 (3%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+L+  +     +K+ DFG AR L P +   T  G+P YMAPE++    Y    D+WS+
Sbjct: 126 ENILLDED---GHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSL 182

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL++L+TGKPPF G +QL      +   +  FPP    ++ P+  DL R LL ++P +
Sbjct: 183 GVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPP-PEWDISPEAKDLIRKLLVKDPEK 241

Query: 134 RITFKEFFNHRFL 146
           R+T +E   H F 
Sbjct: 242 RLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  137 bits (347), Expect = 7e-37
 Identities = 51/138 (36%), Positives = 73/138 (52%), Gaps = 9/138 (6%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHK-YDAKADLW 71
           +N+L+  N    V+KI DFG A+ L        T  G+P YMAPE++     Y  K D+W
Sbjct: 127 ENILLDEN---GVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVW 183

Query: 72  SVGAILFQLVTGKPPFDGS---NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           S+G IL++L+TGKPPF G    +QLQL + IL    L F          +  DL +  L 
Sbjct: 184 SLGVILYELLTGKPPFSGENILDQLQLIRRIL-GPPLEFDEPKWSSGSEEAKDLIKKCLN 242

Query: 129 QNPVERITFKEFFNHRFL 146
           ++P +R T +E   H + 
Sbjct: 243 KDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  131 bits (331), Expect = 1e-34
 Identities = 47/130 (36%), Positives = 77/130 (59%), Gaps = 8/130 (6%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           QN+ +++N    ++K+GDFG ++ L+   DLA T+ G+P Y++PE+ QN  Y+ K+D+WS
Sbjct: 132 QNIFLTSN---GLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWS 188

Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           +G +L++L T K PF+G N L+L   IL       P     EL     +L   LL+++P 
Sbjct: 189 LGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELR----NLVSSLLQKDPE 244

Query: 133 ERITFKEFFN 142
           ER +  +   
Sbjct: 245 ERPSIAQILQ 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  122 bits (309), Expect = 1e-31
 Identities = 43/123 (34%), Positives = 71/123 (57%), Gaps = 9/123 (7%)

Query: 27  LKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG A+ L +     +T CG+P Y+APE++    Y    D WS+G +L++++TGKP
Sbjct: 132 IKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKP 191

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT---FKEFFN 142
           PF   ++ ++++ IL    LRFP      L P+  DL   LL+++P +R+     +E   
Sbjct: 192 PFYAEDRKEIYEKILKD-PLRFPEF----LSPEARDLISGLLQKDPTKRLGSGGAEEIKA 246

Query: 143 HRF 145
           H F
Sbjct: 247 HPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  111 bits (280), Expect = 2e-27
 Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 33/158 (20%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---------------------ADTLCGSP 51
            +N+L+  +     +KI DFG A+ L P                          +  G+ 
Sbjct: 130 PENILLDKDMH---IKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTA 186

Query: 52  LYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGA 111
            Y++PE++        +DLW++G I++Q++TGKPPF GSN+   FQ IL   E  FPP  
Sbjct: 187 EYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL-KLEYSFPPN- 244

Query: 112 IEELHPDCVDLCRCLLRQNPVERITFKEFF----NHRF 145
                PD  DL   LL  +P +R+   E +     H F
Sbjct: 245 ---FPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score =  108 bits (272), Expect = 2e-26
 Identities = 51/141 (36%), Positives = 76/141 (53%), Gaps = 15/141 (10%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           NLL+ +N     +K+ DFGFA+ L       T CG+P Y+APEII N  YD   D WS+G
Sbjct: 123 NLLLDSNGY---VKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLG 179

Query: 75  AILFQLVTGKPPFDGSNQLQL--FQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNP 131
            +L++L+TG+PPF   ++  +  + +IL     L FP      +     DL + LLR+NP
Sbjct: 180 ILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPN----YIDKAAKDLIKQLLRRNP 235

Query: 132 VERI-----TFKEFFNHRFLG 147
            ER+       K+   H++  
Sbjct: 236 EERLGNLKGGIKDIKKHKWFN 256

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score =  105 bits (264), Expect = 2e-25
 Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 8/134 (5%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
            N+ +  N     +K+GDFG A+ L      A T  G+P YM+PE + +  YD K+D+WS
Sbjct: 139 ANIFLDAN---NNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWS 195

Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           +G ++++L    PPF   NQLQL   I      R P     EL+    ++ + +L  +P 
Sbjct: 196 LGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSELN----EVIKSMLNVDPD 251

Query: 133 ERITFKEFFNHRFL 146
           +R + +E      +
Sbjct: 252 KRPSTEELLQLPLI 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  104 bits (263), Expect = 2e-25
 Identities = 47/138 (34%), Positives = 75/138 (54%), Gaps = 10/138 (7%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD---TLCGSPLYMAPEIIQNHKYDAKAD 69
             N+LV ++ V   +K+ DFG A+ L   +  +   ++ G+P +MAPE+I+  +Y   AD
Sbjct: 129 GANILVDSDGV---VKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAAD 185

Query: 70  LWSVGAILFQLVTGKPPF-DGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS+G  + ++ TGKPP+ +  N +     I +S E   PP   E L  +  D  R  LR
Sbjct: 186 IWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGE---PPEIPEHLSEEAKDFLRKCLR 242

Query: 129 QNPVERITFKEFFNHRFL 146
           ++P +R T  E   H FL
Sbjct: 243 RDPKKRPTADELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  100 bits (250), Expect = 1e-23
 Identities = 46/135 (34%), Positives = 67/135 (49%), Gaps = 7/135 (5%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII-QNHKYDAKADLW 71
             N+LV TN V   +K+ DFG A+ +     A +  GSP +MAPE+I Q   Y   AD+W
Sbjct: 130 GANILVDTNGV---VKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIW 186

Query: 72  SVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
           S+G  + ++ TGKPP+     +     I  S EL   P   + L  +  D     L+++P
Sbjct: 187 SLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKEL---PPIPDHLSDEAKDFILKCLQRDP 243

Query: 132 VERITFKEFFNHRFL 146
             R T  E   H F+
Sbjct: 244 SLRPTAAELLEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  100 bits (251), Expect = 1e-23
 Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 18/144 (12%)

Query: 15  NLLVSTNEVTPVLKIGDFGFA------RSLTPQDLAD---TLCGSPLYMAPEIIQNHKYD 65
           N+L+ +N     LK+ DFG +      R +   D       + G+P Y+APE+I    + 
Sbjct: 123 NILIDSNGH---LKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHS 179

Query: 66  AKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRC 125
              D WS+G IL++ + G PPF G    ++FQNIL     +       E+  + +DL   
Sbjct: 180 KTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNG---KIEWPEDVEVSDEAIDLISK 236

Query: 126 LLRQNPVERI---TFKEFFNHRFL 146
           LL  +P +R+   + +E  NH F 
Sbjct: 237 LLVPDPEKRLGAKSIEEIKNHPFF 260

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 99.5 bits (249), Expect = 4e-23
 Identities = 41/108 (37%), Positives = 65/108 (60%), Gaps = 7/108 (6%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +KI DFGFA+ +  +    TLCG+P Y+APEII +  Y    D W++G ++++++ G PP
Sbjct: 140 IKITDFGFAKRV--KGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPP 197

Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
           F   N +Q+++ IL   ++RFP        PD  DL R LL+ +  +R
Sbjct: 198 FFDDNPIQIYEKIL-EGKVRFPS----FFSPDAKDLIRNLLQVDLTKR 240

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 99.8 bits (249), Expect = 4e-23
 Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 12/147 (8%)

Query: 28  KIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           KI DFG  +  +       T CG+P Y+APEI+    Y    D W++G +L++++ G+ P
Sbjct: 136 KIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSP 195

Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFF 141
           F+G ++ +LFQ+IL   E+R+P      L  +   + +  L +NP +R+       ++  
Sbjct: 196 FEGDDEDELFQSILED-EVRYPRW----LSKEAKSILKSFLTKNPEKRLGCLPTGEQDIK 250

Query: 142 NHRFLGELRQTVHAEQHSVVPETKPMV 168
            H F  E+      E+  + P  KP +
Sbjct: 251 GHPFFREI-DWDKLERKEIKPPFKPKI 276

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 93.3 bits (233), Expect = 4e-21
 Identities = 55/169 (32%), Positives = 79/169 (46%), Gaps = 49/169 (28%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEII-QN 61
           QN+L++ +    VLK+ DFG AR+           G PL           Y APEI+  +
Sbjct: 127 QNILINRD---GVLKLADFGLARA----------FGIPLRTYTHEVVTLWYRAPEILLGS 173

Query: 62  HKYDAKADLWSVGAILFQLVTGKPPFDGSNQL-QLFQ--NIL-TSTE------------- 104
             Y    D+WSVG I  +++TGKP F G +++ QLF+   IL T TE             
Sbjct: 174 KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK 233

Query: 105 LRFP--PG-----AIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
             FP  P       +  L P+ +DL   +L+ NP +RI+ KE   H + 
Sbjct: 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 92.5 bits (230), Expect = 5e-21
 Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 8/120 (6%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N+L+  N++   +KIGD G ++ L  +++A T  G+P YMAPE+ +   Y  K+D+WS+G
Sbjct: 133 NILLVANDL---VKIGDLGISKVLK-KNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLG 188

Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
            +L+++ T  PPF+  +   L   +        PP   ++L     +  R +L+  P  R
Sbjct: 189 CLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDL----QNFIRSMLQVKPKLR 244

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 90.6 bits (225), Expect = 2e-20
 Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 5/109 (4%)

Query: 27  LKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KIGD G A+ L+     A+T+ G+P Y++PE+ ++  Y+ K+D+W++G +L++  TGK 
Sbjct: 140 VKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKH 199

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
           PFD +NQ  L   I+      FPP + +        L    L ++  +R
Sbjct: 200 PFDANNQGALILKIIRG---VFPPVS-QMYSQQLAQLIDQCLTKDYRQR 244

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 89.2 bits (222), Expect = 3e-20
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 40/132 (30%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLW 71
           +N+L+ ++     +K+ DFG ++ LT    L  T+ G+P YMAPE++     Y  K+D+W
Sbjct: 121 ENILLDSDN--GKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIW 178

Query: 72  SVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
           S+G IL++L                                    P+  DL R +L+++P
Sbjct: 179 SLGVILYEL------------------------------------PELKDLIRKMLQKDP 202

Query: 132 VERITFKEFFNH 143
            +R + KE   H
Sbjct: 203 EKRPSAKEILEH 214

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 90.2 bits (224), Expect = 3e-20
 Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 15/148 (10%)

Query: 3   YVFMIVSANAC---QNLL---VSTNEV----TPVLKIGDFGFARSL-TPQDLADTLCGSP 51
           Y+F IVSA +      +L   + T  +      ++K+GDFG ++ L +   +A+T+ G+P
Sbjct: 106 YLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTP 165

Query: 52  LYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGA 111
            YM+PE+ Q  KY+ K+D+W++G +L++L+T K  FD +N L L   I+           
Sbjct: 166 YYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVY 225

Query: 112 IEELHPDCVDLCRCLLRQNPVERITFKE 139
             EL      L   LL+Q+P +R T  E
Sbjct: 226 SSELI----SLVHSLLQQDPEKRPTADE 249

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 89.2 bits (222), Expect = 7e-20
 Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 9/135 (6%)

Query: 14  QNLLVSTN-EVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLW 71
            N+L+S   +V    K+ DFG +  LT      +T  G+P +MAPE+I+   YD KAD+W
Sbjct: 127 ANILLSEEGDV----KLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIW 182

Query: 72  SVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
           S+G    +L  G+PP    + +++   I  +           +   D V LC   L ++P
Sbjct: 183 SLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLC---LNKDP 239

Query: 132 VERITFKEFFNHRFL 146
            ER + KE   H+F+
Sbjct: 240 KERPSAKELLKHKFI 254

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 88.8 bits (221), Expect = 9e-20
 Identities = 45/134 (33%), Positives = 72/134 (53%), Gaps = 11/134 (8%)

Query: 15  NLLVSTN-EVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           N+L++++ EV    K+ DFG +  L+     +T+ G+P +MAPE+I    YD KAD+WS+
Sbjct: 128 NILLTSDGEV----KLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSL 183

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTS--TELRFPPGAIEELHPDCVDLCRCLLRQNP 131
           G    +L  GKPP+     ++    I T+    LR P    +E   D +  C   L++NP
Sbjct: 184 GITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFK-DFLKKC---LQKNP 239

Query: 132 VERITFKEFFNHRF 145
            +R T ++   H F
Sbjct: 240 EKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 89.5 bits (222), Expect = 2e-19
 Identities = 38/110 (34%), Positives = 66/110 (60%), Gaps = 6/110 (5%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  + ++       T CG+P Y+APEII    Y    D W+ G +L++++ G+P
Sbjct: 140 IKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQP 199

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           PFDG ++ +LFQ+I+    + +P    + L  + V +C+ LL ++P +R+
Sbjct: 200 PFDGEDEDELFQSIMEHN-VSYP----KSLSKEAVSICKGLLTKHPAKRL 244

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 87.8 bits (218), Expect = 2e-19
 Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 10/125 (8%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           + I DF  A  +TP  L  +  G+P YMAPE++    Y    D WS+G   ++ + GK P
Sbjct: 139 VHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRP 198

Query: 87  FDG-SNQL--QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI--TFKEFF 141
           + G S  +  Q+     T+  L +P         + +D    LL ++P +R+    K+  
Sbjct: 199 YRGHSRTIRDQIRAKQETADVL-YPATWS----TEAIDAINKLLERDPQKRLGDNLKDLK 253

Query: 142 NHRFL 146
           NH + 
Sbjct: 254 NHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 87.6 bits (218), Expect = 8e-19
 Identities = 52/171 (30%), Positives = 76/171 (44%), Gaps = 42/171 (24%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL--------YMAPEII-QNHKYD 65
           N+LV++N     LKI DFG AR + P +         L        Y APE++  + +Y 
Sbjct: 133 NILVNSNCD---LKICDFGLARGVDPDEDEK----GFLTEYVVTRWYRAPELLLSSSRYT 185

Query: 66  AKADLWSVGAILFQLVTGKPPFDGS---NQLQLFQNIL-----------TSTELR----- 106
              D+WSVG I  +L+T KP F G    +QL L   +L           TS + R     
Sbjct: 186 KAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKS 245

Query: 107 ---FPPGAIEELHP----DCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
               P   + +L P    + +DL   +L  +P +RIT  E   H +L +L 
Sbjct: 246 LPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH 296

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 88.9 bits (220), Expect = 8e-19
 Identities = 44/126 (34%), Positives = 71/126 (56%), Gaps = 7/126 (5%)

Query: 24  TPVLKIGDFGFARSLTPQ---DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL 80
           T ++K+GDFGF++  +     D+A + CG+P Y+APE+ +  +Y  KAD+WS+G IL++L
Sbjct: 205 TGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYEL 264

Query: 81  VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF 140
           +T   PF G +Q ++ Q +L      FP      +      L   LL +NP  R T ++ 
Sbjct: 265 LTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKA----LLDPLLSKNPALRPTTQQL 320

Query: 141 FNHRFL 146
            +  FL
Sbjct: 321 LHTEFL 326

Length = 478

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 85.4 bits (211), Expect = 1e-18
 Identities = 49/134 (36%), Positives = 70/134 (52%), Gaps = 7/134 (5%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           QN+ +S N +  V K+GDFG AR L    +LA T  G+P Y++PEI QN  Y+ K D+WS
Sbjct: 130 QNIFLSKNGM--VAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWS 187

Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           +G +L++L T K PF+G+N  QL   I         P    +L      L   L + +P 
Sbjct: 188 LGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLR----SLISQLFKVSPR 243

Query: 133 ERITFKEFFNHRFL 146
           +R +        FL
Sbjct: 244 DRPSITSILKRPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 85.7 bits (213), Expect = 2e-18
 Identities = 44/135 (32%), Positives = 73/135 (54%), Gaps = 10/135 (7%)

Query: 15  NLLVSTN-EVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           N+L+S +  V    K+ DFGFA  LT  +   +++ G+P +MAPE+I+   Y  K D+WS
Sbjct: 146 NILLSKDGSV----KLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWS 201

Query: 73  VGAILFQLVTGKPPFDGSNQLQ-LFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
           +G +  ++  G+PP+     L+ LF   L +T+   P    E+  P+  D     L ++P
Sbjct: 202 LGIMCIEMAEGEPPYLREPPLRALF---LITTKGIPPLKNPEKWSPEFKDFLNKCLVKDP 258

Query: 132 VERITFKEFFNHRFL 146
            +R + +E   H FL
Sbjct: 259 EKRPSAEELLQHPFL 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 83.8 bits (208), Expect = 4e-18
 Identities = 44/137 (32%), Positives = 63/137 (45%), Gaps = 12/137 (8%)

Query: 15  NLLVSTN-EVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           NLL+++  EV    KI DFG ++ L    D  +T  G+  YM+PE IQ   Y   AD+WS
Sbjct: 130 NLLINSKGEV----KIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWS 185

Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G  L +   GK PF    Q    +L Q I        P         D +  C   L++
Sbjct: 186 LGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISAC---LQK 242

Query: 130 NPVERITFKEFFNHRFL 146
           +P +R +  E   H F+
Sbjct: 243 DPKKRPSAAELLQHPFI 259

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 83.7 bits (208), Expect = 7e-18
 Identities = 48/168 (28%), Positives = 76/168 (45%), Gaps = 45/168 (26%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL--------YMAPEII-QNHK 63
            +NLLVS  EV   +KI DFG AR +  +         P         Y APEI+ ++  
Sbjct: 127 PENLLVSGPEV---VKIADFGLAREIRSRP--------PYTDYVSTRWYRAPEILLRSTS 175

Query: 64  YDAKADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNIL---------------TSTEL 105
           Y +  D+W++G I+ +L T +P F GS+   QL    ++L               +    
Sbjct: 176 YSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGF 235

Query: 106 RFPPGA---IEEL----HPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           RFP  A   + +L     P+ +DL + +LR +P +R T  +   H + 
Sbjct: 236 RFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 83.3 bits (206), Expect = 1e-17
 Identities = 38/109 (34%), Positives = 64/109 (58%), Gaps = 7/109 (6%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFGFA+ L  +D   TLCG+P Y+APE+IQ+  ++   D W++G ++++++ G PP
Sbjct: 140 IKLTDFGFAKKL--RDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPP 197

Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F   N   +++ IL + +L FP      L     DL + LL  +   R+
Sbjct: 198 FFDDNPFGIYEKIL-AGKLEFP----RHLDLYAKDLIKKLLVVDRTRRL 241

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 81.9 bits (203), Expect = 2e-17
 Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 8/135 (5%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLC-GSPLYMAPEIIQNHKYDAKADLW 71
             N+L + + V   +K+ DFG A  L      D    G+P +MAPE+I+       +D+W
Sbjct: 127 AANILTTKDGV---VKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIW 183

Query: 72  SVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
           S+G  + +L+TG PP+   N +     I+       P G      P+  D      +++P
Sbjct: 184 SLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGI----SPELKDFLMQCFQKDP 239

Query: 132 VERITFKEFFNHRFL 146
             R T K+   H ++
Sbjct: 240 NLRPTAKQLLKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 82.9 bits (205), Expect = 2e-17
 Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 20/189 (10%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  + ++  +  A T CG+P Y+APEI++  KY+   D WS G +L++++ G+ 
Sbjct: 135 IKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQS 194

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFK-EFFNHR 144
           PF G ++ +LF +IL      FP    +E      D    L  ++P +R+    +   H 
Sbjct: 195 PFHGEDEDELFDSILNDRPH-FPRWISKEAK----DCLSKLFERDPTKRLGVDGDIRQHP 249

Query: 145 FLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSKNPKSACSSACD 204
           F   +      E+  + P  KP V+     +P D  +   E        N K   S   D
Sbjct: 250 FFRGIDWER-LEKREIPPPFKPKVK-----SPSDASNFDREF------TNEKVRLSPV-D 296

Query: 205 KVILNTGDQ 213
           K +L + DQ
Sbjct: 297 KKLLASMDQ 305

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 81.6 bits (202), Expect = 4e-17
 Identities = 53/161 (32%), Positives = 74/161 (45%), Gaps = 31/161 (19%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEII-QNHKYDAKADL 70
            NLL+S      VLKI DFG AR  + ++  L      +  Y APE++    KYD   DL
Sbjct: 128 ANLLIS---ADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDL 184

Query: 71  WSVGAILFQLVTGKPPFDGSN---QLQLFQNIL-TSTE--------------LRFP---P 109
           W+VG I  +L+ G P F G N   QL +    L T  E              + FP   P
Sbjct: 185 WAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKP 244

Query: 110 GAIEELHPDC----VDLCRCLLRQNPVERITFKEFFNHRFL 146
             +EE+ PD     +DL + LL  +P +R++  E   H + 
Sbjct: 245 IPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 81.3 bits (201), Expect = 4e-17
 Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 18/161 (11%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           N+LV+    T  +K+ DFG A  L        T  G+P +MAPE+I   K YD KAD+WS
Sbjct: 131 NILVTN---TGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWS 187

Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           +G  ++++ TG PP+   +  +    I  S   R       +L  + V  C   L + P 
Sbjct: 188 LGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAAC---LDEEPK 244

Query: 133 ERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNS 173
           ER++ +E    +++         + HS  P    + EL++ 
Sbjct: 245 ERLSAEELLKSKWI---------KAHSKTP-VSILKELISR 275

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 80.6 bits (199), Expect = 5e-17
 Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 9/122 (7%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARS-LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           NLL+     T  LK+ DFG +R+ L  +       G+P Y+APE I     D  +D WS+
Sbjct: 127 NLLIDQ---TGHLKLTDFGLSRNGLENKKFV----GTPDYLAPETILGVGDDKMSDWWSL 179

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G ++F+ + G PPF       +F NIL S  + +P    E   P+ VDL   LL  +P +
Sbjct: 180 GCVIFEFLFGYPPFHAETPDAVFDNIL-SRRINWPEEVKEFCSPEAVDLINRLLCMDPAK 238

Query: 134 RI 135
           R+
Sbjct: 239 RL 240

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 81.5 bits (201), Expect = 6e-17
 Identities = 46/143 (32%), Positives = 74/143 (51%), Gaps = 10/143 (6%)

Query: 31  DFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDG 89
           DFG  + ++   D  +T CG+P Y+APE++  H Y    D W++G +L++++TG PPF  
Sbjct: 136 DFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYD 195

Query: 90  SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF---KEFFNHRFL 146
            N  ++++ IL    LRFP G   +      DL   LL ++P  R+ +   +E  NH F 
Sbjct: 196 ENVNEMYRKILQEP-LRFPDGFDRDAK----DLLIGLLSRDPTRRLGYNGAQEIKNHPFF 250

Query: 147 GELRQTVHAEQHSVVPETKPMVE 169
            +L       +  + P  KP V 
Sbjct: 251 SQLSWKKLLMK-GIQPPFKPAVS 272

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 81.8 bits (202), Expect = 6e-17
 Identities = 42/150 (28%), Positives = 75/150 (50%), Gaps = 14/150 (9%)

Query: 28  KIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           K+ DFG  +  +       T CG+P Y+APEI+Q  +Y    D W++G ++++++ G+PP
Sbjct: 136 KLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPP 195

Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-------TFKE 139
           F+  N+  LF++IL    L +P      L  + V + +  + +NP +R+           
Sbjct: 196 FEADNEDDLFESILHDDVL-YPVW----LSKEAVSILKAFMTKNPNKRLGCVASQGGEDA 250

Query: 140 FFNHRFLGELRQTVHAEQHSVVPETKPMVE 169
              H F  E+   +  EQ  + P  KP ++
Sbjct: 251 IKQHPFFKEIDWVL-LEQRKIKPPFKPKIK 279

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 81.6 bits (201), Expect = 6e-17
 Identities = 37/110 (33%), Positives = 65/110 (59%), Gaps = 6/110 (5%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  +       T CG+P Y+APEII    Y    D W+ G +L++++ G+P
Sbjct: 140 IKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQP 199

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           PFDG ++ +LFQ+I+    + +P    + L  + V +C+ L+ ++P +R+
Sbjct: 200 PFDGEDEDELFQSIMEHN-VSYP----KSLSKEAVSICKGLMTKHPSKRL 244

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 81.2 bits (200), Expect = 8e-17
 Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 12/148 (8%)

Query: 27  LKIGDFGFARS-LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  ++      T CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 134 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 193

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 194 PFYNQDHERLFELILME-EIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 248

Query: 141 FNHRFLGELRQTVHAEQHSVVPETKPMV 168
             HRF   +       Q  ++P  KP V
Sbjct: 249 MEHRFFLSI-NWQDVVQKKLLPPFKPQV 275

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 80.8 bits (199), Expect = 1e-16
 Identities = 46/149 (30%), Positives = 80/149 (53%), Gaps = 14/149 (9%)

Query: 27  LKIGDFGFARS-LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  +       T CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 135 IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 194

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 195 PFYNQDHEKLFELILME-EIRFP----RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEI 249

Query: 141 FNHRFLGELR-QTVHAEQHSVVPETKPMV 168
             H+F   +  Q V+ ++  +VP  KP V
Sbjct: 250 MQHKFFAGIVWQDVYEKK--LVPPFKPQV 276

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 79.8 bits (197), Expect = 2e-16
 Identities = 55/162 (33%), Positives = 80/162 (49%), Gaps = 30/162 (18%)

Query: 15  NLLVSTNEVTPVLKIGDFGFAR----SLTP------------QDLADTLCGSPLYMAPEI 58
           NLL+++      +K+ DFG ++    SLT             + L   +CG+P Y+APE+
Sbjct: 131 NLLITS---MGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEV 187

Query: 59  IQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPD 118
           I    Y    D W++G IL++ + G  PF G    +LF  ++ S ++ +P G  E L  D
Sbjct: 188 ILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI-SDDIEWPEGD-EALPAD 245

Query: 119 CVDLCRCLLRQNPVERI---TFKEFFNHRFL------GELRQ 151
             DL   LLRQNP+ER+      E   HRF       G LRQ
Sbjct: 246 AQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNGLLRQ 287

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 78.9 bits (194), Expect = 2e-16
 Identities = 41/134 (30%), Positives = 74/134 (55%), Gaps = 8/134 (5%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           QN+ ++    T ++K+GD G AR L  Q D+A TL G+P YM+PE+  N  Y+ K+D+W+
Sbjct: 131 QNVFLTR---TNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWA 187

Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           +G  ++++ T K  F+  +   L   I+   E + PP   ++  P+  +L   +L + P 
Sbjct: 188 LGCCVYEMATLKHAFNAKDMNSLVYRII---EGKLPPMP-KDYSPELGELIATMLSKRPE 243

Query: 133 ERITFKEFFNHRFL 146
           +R + K      ++
Sbjct: 244 KRPSVKSILRQPYI 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 78.5 bits (194), Expect = 3e-16
 Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 14/138 (10%)

Query: 15  NLLVSTN-EVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           N+LV++  ++    K+ DFG +  L    LA T  G+  YMAPE IQ + Y  K+D+WS+
Sbjct: 131 NILVNSRGQI----KLCDFGVSGQLV-NSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSL 185

Query: 74  GAILFQLVTGKPPFDGSNQ-----LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           G  L +L TG+ P+   N       +L Q I+     R P G       D V+LC   L 
Sbjct: 186 GLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLC---LI 242

Query: 129 QNPVERITFKEFFNHRFL 146
           ++P ER ++KE   H F+
Sbjct: 243 KDPRERPSYKELLEHPFI 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 79.2 bits (195), Expect = 4e-16
 Identities = 54/189 (28%), Positives = 91/189 (48%), Gaps = 20/189 (10%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  + ++   + A T CG+P Y+APEI+Q  KY    D WS G +L++++ G+ 
Sbjct: 135 IKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQS 194

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-TFKEFFNHR 144
           PF G ++ +LF++I   T     P     +  +  D+   L  ++P  R+        H 
Sbjct: 195 PFHGDDEDELFESIRVDT-----PHYPRWITKESKDILEKLFERDPTRRLGVVGNIRGHP 249

Query: 145 FLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSKNPKSACSSACD 204
           F   +  T   E+  + P  KP V+  +  +  DR  L         S+ P+    S  D
Sbjct: 250 FFKTINWTA-LEKRELDPPFKPKVKSPSDYSNFDREFL---------SEKPR---LSYSD 296

Query: 205 KVILNTGDQ 213
           K ++++ DQ
Sbjct: 297 KNLIDSMDQ 305

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 81.1 bits (200), Expect = 4e-16
 Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 18/141 (12%)

Query: 7   IVSANA--CQNLLVSTNEVTPVLKIGDFGFAR---SLTPQDLADTLCGSPLYMAPEIIQN 61
           I SAN   C N LV         K+GDFGF++   +    D+  T CG+P Y+APEI + 
Sbjct: 169 IKSANILLCSNGLV---------KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRR 219

Query: 62  HKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVD 121
             Y  KAD++S+G +L++L+T K PFDG N  ++    L     R+ P     + P+  +
Sbjct: 220 KPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAG---RYDP-LPPSISPEMQE 275

Query: 122 LCRCLLRQNPVERITFKEFFN 142
           +   LL  +P  R +  +  N
Sbjct: 276 IVTALLSSDPKRRPSSSKLLN 296

Length = 496

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 77.9 bits (192), Expect = 5e-16
 Identities = 38/110 (34%), Positives = 64/110 (58%), Gaps = 5/110 (4%)

Query: 26  VLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
            +K+GDFG AR L +  +LA T  G+P Y++PEI +N  Y+ K+D+W++G +L+++ T K
Sbjct: 139 TIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLK 198

Query: 85  PPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
             F+  N   L   I+  +   +PP +      D  +L   L ++NP +R
Sbjct: 199 HAFEAGNMKNLVLKIIRGS---YPPVSS-HYSYDLRNLVSQLFKRNPRDR 244

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 78.3 bits (193), Expect = 5e-16
 Identities = 45/128 (35%), Positives = 61/128 (47%), Gaps = 15/128 (11%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFG +  L    +ADT  G+  YM+PE IQ  KY  K+D+WS+G  + +L  GK P
Sbjct: 143 IKLCDFGVSGELI-NSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFP 201

Query: 87  FDGSNQ-----------LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F  SN            L L Q I+     R P     E   D VD C   L ++P ER 
Sbjct: 202 FAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRDFVDAC---LLKDPTERP 258

Query: 136 TFKEFFNH 143
           T ++    
Sbjct: 259 TPQQLCAM 266

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 79.0 bits (195), Expect = 5e-16
 Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 30/187 (16%)

Query: 6   MIVSANAC------------QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLY 53
           M  + +A             +N L+     +  +K+ DFG ++ +     A+++ GSP Y
Sbjct: 110 MFEAVDALHELGYIHRDLKPENFLIDA---SGHIKLTDFGLSKGIV--TYANSVVGSPDY 164

Query: 54  MAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTE-LRFPPG-- 110
           MAPE+++   YD   D WS+G +L++ + G PPF GS   + ++N+    E L+ P    
Sbjct: 165 MAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDD 224

Query: 111 AIEELHPDCVDL-CRCLLRQNPVERI-TFKEFFNHRFLGELRQTVHAEQHSVVPETKPMV 168
               L  +  DL  + +   +P  R  + ++  NH F  E+      E   + P   P V
Sbjct: 225 PRFNLSDEAWDLITKLI--NDPSRRFGSLEDIKNHPFFKEVDW---NELRELKP---PFV 276

Query: 169 ELLNSST 175
             L S  
Sbjct: 277 PELESEI 283

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 78.1 bits (193), Expect = 6e-16
 Identities = 47/160 (29%), Positives = 71/160 (44%), Gaps = 30/160 (18%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLW 71
           +NLL++T  V   LK+ DFG ARS  +P         +  Y APE++   K Y    D+W
Sbjct: 127 ENLLINTEGV---LKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIW 183

Query: 72  SVGAILFQLVTGKPPFDGSNQL-QLF-------------QNILTSTE----LRFP---PG 110
           SVG I  +L++ +P F G +++ QLF                 TS        FP     
Sbjct: 184 SVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGM 243

Query: 111 AIEELHPDCVDLCRCLLRQ----NPVERITFKEFFNHRFL 146
            + +L P+       LL Q    +P +RIT ++   H + 
Sbjct: 244 PLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 78.5 bits (193), Expect = 6e-16
 Identities = 54/194 (27%), Positives = 88/194 (45%), Gaps = 30/194 (15%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  + ++       T CG+P Y+APEI+   KY+   D WS G +L++++ G+ 
Sbjct: 135 IKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQS 194

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFK------E 139
           PF G ++ +LFQ+I         P     L  +  D+   L  + P  R+  K       
Sbjct: 195 PFHGHDEEELFQSIRMDN-----PCYPRWLTREAKDILVKLFVREPERRLGVKGDIRQHP 249

Query: 140 FFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSKNPKSAC 199
           FF       L      E+  + P  KP V+  N  +  D+  L +E P  S +       
Sbjct: 250 FFREIDWSAL------EEREIEPPFKPKVKSANDCSNFDKEFL-NEKPRLSVT------- 295

Query: 200 SSACDKVILNTGDQ 213
               D++++N+ DQ
Sbjct: 296 ----DRMLINSMDQ 305

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 78.9 bits (195), Expect = 7e-16
 Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 7/106 (6%)

Query: 43  LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTS 102
            A++  G+P Y+APE+++   Y  + D WS+G IL++++ G PPF      + +  I+  
Sbjct: 186 RANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINW 245

Query: 103 TE-LRFPPGAIEELHPDCVDL-CRCLLRQNPVERIT-FKEFFNHRF 145
            E LRFPP     + P+ +DL CR L   +P +R+  F+E  +H F
Sbjct: 246 KESLRFPP--DPPVSPEAIDLICRLL--CDPEDRLGSFEEIKSHPF 287

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 77.3 bits (191), Expect = 7e-16
 Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 18/139 (12%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           N+L++        K+ DFG +  LT      +T+ G+P +MAPE+IQ   Y+ KAD+WS+
Sbjct: 129 NILLNE---EGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSL 185

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHP------DCVDLCRCLL 127
           G    ++  GKPP+   + ++    I        PP  + +         D V  C   L
Sbjct: 186 GITAIEMAEGKPPYSDIHPMRAIFMIPNK-----PPPTLSDPEKWSPEFNDFVKKC---L 237

Query: 128 RQNPVERITFKEFFNHRFL 146
            ++P ER +  +   H F+
Sbjct: 238 VKDPEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 77.9 bits (192), Expect = 1e-15
 Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 6/110 (5%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG  + S+    +  T CG+  YMAPEI+    +    D WS+GA+++ ++TG P
Sbjct: 139 VKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAP 198

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           PF   N+ +    IL   +L  PP     L P+  DL + LL++NP  R+
Sbjct: 199 PFTAENRKKTIDKILKG-KLNLPP----YLTPEARDLLKKLLKRNPSSRL 243

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 77.2 bits (190), Expect = 1e-15
 Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 17/139 (12%)

Query: 15  NLLV-STNEVTPVLKIGDFGFARSLTPQ-----DLADTLCGSPLYMAPEIIQNHKYDAKA 68
           NLL+ ST +    L+I DFG A  L  +     +    L G+  +MAPE+++  +Y    
Sbjct: 133 NLLIDSTGQR---LRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSC 189

Query: 69  DLWSVGAILFQLVTGKPPFDG---SNQLQLFQNILTSTELRFPPGAIEELHPDCVD-LCR 124
           D+WSVG ++ ++ T KPP++    SN L L   I ++T     P   E L P   D   R
Sbjct: 190 DVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT---APSIPEHLSPGLRDVTLR 246

Query: 125 CLLRQNPVERITFKEFFNH 143
           C L   P +R   +E   H
Sbjct: 247 C-LELQPEDRPPSRELLKH 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 76.5 bits (188), Expect = 2e-15
 Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 5/122 (4%)

Query: 26  VLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
           +LKIGDFG +R L    DLA T  G+P YM+PE +++  YD+K+D+WS+G IL+++    
Sbjct: 143 LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLA 202

Query: 85  PPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHR 144
             F+G N L +   I+       P     +L+     + + +L ++P  R +  E   + 
Sbjct: 203 HAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNS----IMQSMLNKDPSLRPSAAEILRNP 258

Query: 145 FL 146
           F+
Sbjct: 259 FI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 76.4 bits (189), Expect = 2e-15
 Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 13/137 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  +    V+KI DFG +R +   D      G  L   +MAPE +++  + +K+
Sbjct: 132 AARNCLVGED---LVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKS 188

Query: 69  DLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ T G  P+ G SN+ ++ + +     L  P    +EL+    +L    
Sbjct: 189 DVWSFGVLLWEIFTLGATPYPGLSNE-EVLEYLRKGYRLPKPEYCPDELY----ELMLSC 243

Query: 127 LRQNPVERITFKEFFNH 143
            + +P +R TF E    
Sbjct: 244 WQLDPEDRPTFSELVER 260

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 76.6 bits (189), Expect = 2e-15
 Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 13/131 (9%)

Query: 26  VLKIGDFGFA-----RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK---ADLWSVGAIL 77
           V+K+GDFG A      + T  +   +L G+P YMAPE+I   K       AD+WS+G ++
Sbjct: 137 VIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVV 196

Query: 78  FQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVD-LCRCLLRQNPVERI 135
            ++ TGK P+    N+ Q+  ++    +   P     +L P+  D L RC L  +P +R 
Sbjct: 197 LEMATGKRPWSELDNEFQIMFHVGAGHKPPIP--DSLQLSPEGKDFLDRC-LESDPKKRP 253

Query: 136 TFKEFFNHRFL 146
           T  E   H F+
Sbjct: 254 TASELLQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 76.4 bits (188), Expect = 2e-15
 Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 9/124 (7%)

Query: 27  LKIGDFGFARSL----TPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT 82
           +K+GDFG ++ L    +      ++ G+P +M+PE+I    Y  KAD+WSVG  + +++T
Sbjct: 143 VKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT 202

Query: 83  GKPPFDGSNQLQLFQNILTS-TELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF 141
            KPP+     +     I T  T  + P      + PD  +  R    +N  +R + +E  
Sbjct: 203 EKPPWAEFEAMAAIFKIATQPTNPQLPS----HVSPDARNFLRRTFVENAKKRPSAEELL 258

Query: 142 NHRF 145
            H F
Sbjct: 259 RHFF 262

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 75.7 bits (186), Expect = 2e-15
 Identities = 39/130 (30%), Positives = 74/130 (56%), Gaps = 6/130 (4%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QN+L+  +++  V+KIGDFG ++ L+ +  A T+ G+P Y++PE+ +   Y+ K+D+W++
Sbjct: 130 QNILLDKHKM--VVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWAL 187

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +L++L + K  F+ +N   L   I++ T   F P + +   PD   L   +L  +P +
Sbjct: 188 GCVLYELASLKRAFEAANLPALVLKIMSGT---FAPIS-DRYSPDLRQLILSMLNLDPSK 243

Query: 134 RITFKEFFNH 143
           R    +    
Sbjct: 244 RPQLSQIMAQ 253

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 77.1 bits (190), Expect = 2e-15
 Identities = 37/120 (30%), Positives = 61/120 (50%), Gaps = 10/120 (8%)

Query: 31  DFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDG 89
           DFG  +  +       T CG+P Y+APE+++   YD   D W +GA+L++++ G PPF  
Sbjct: 139 DFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 198

Query: 90  SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI----TFKEFFNHRF 145
            +  +++ NIL +  LR  P     +      L   LL+++  +R+     F E  NH F
Sbjct: 199 RDTAEMYDNIL-NKPLRLKPN----ISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVF 253

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 76.8 bits (189), Expect = 3e-15
 Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 14/149 (9%)

Query: 27  LKIGDFGFARS-LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  ++      T CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 134 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 193

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 194 PFYNQDHEKLFELILME-EIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEI 248

Query: 141 FNHRFLGELR-QTVHAEQHSVVPETKPMV 168
             HRF   +  Q V   Q  + P  KP V
Sbjct: 249 MEHRFFASINWQDVV--QKKLEPPFKPQV 275

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 76.8 bits (189), Expect = 3e-15
 Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 7/109 (6%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFGFA+ +   D   TLCG+P Y+APE+IQ+  +    D W++G +L++ + G PP
Sbjct: 157 VKVTDFGFAKKVP--DRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPP 214

Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F      ++++ IL +  L+FP            DL + LL+ +  +R+
Sbjct: 215 FFDDTPFRIYEKIL-AGRLKFPNWFDGRAR----DLVKGLLQTDHTKRL 258

Length = 329

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 76.6 bits (188), Expect = 3e-15
 Identities = 56/184 (30%), Positives = 83/184 (45%), Gaps = 20/184 (10%)

Query: 31  DFGFARS-LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDG 89
           DFG  +  +   D   T CG+P Y+APE+I+   YD   D W +GA+L++++ G PPF  
Sbjct: 139 DFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYC 198

Query: 90  SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF----NHRF 145
            +  +++ NIL    L   PGA          +   LL ++   R+  KE F     H F
Sbjct: 199 RDVAEMYDNIL-HKPLVLRPGA----SLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPF 253

Query: 146 LGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSKNPKSACSSACDK 205
              L  T   EQ  + P   P VE      P+D   + +     +    P S C S+ D 
Sbjct: 254 FESLSWT-DLEQKKIPPPFNPNVE-----GPDD---ISNFDAVFTEETVPYSVCFSS-DY 303

Query: 206 VILN 209
            I+N
Sbjct: 304 SIVN 307

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 76.5 bits (188), Expect = 3e-15
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 10/121 (8%)

Query: 31  DFGFARS-LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDG 89
           DFG  +  + P++   T CG+P Y+APE+++   YD   D W +GA+L++++ G PPF  
Sbjct: 139 DFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYS 198

Query: 90  SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI----TFKEFFNHRF 145
            +  Q++ NIL    L+ P G          DL   LL ++   R+     F E  NH F
Sbjct: 199 RDVSQMYDNIL-HKPLQLPGGKTVA----ACDLLVGLLHKDQRRRLGAKADFLEIKNHVF 253

Query: 146 L 146
            
Sbjct: 254 F 254

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 75.9 bits (186), Expect = 3e-15
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 5/121 (4%)

Query: 27  LKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG A  LT   +  +T  G+P +MAPE+IQ   YD+KAD+WS+G    +L  G+P
Sbjct: 140 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEP 199

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           P    + +++   I  +     PP    E      +     L ++P  R T KE   H+F
Sbjct: 200 PNSDMHPMRVLFLIPKNN----PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKF 255

Query: 146 L 146
           +
Sbjct: 256 I 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 76.3 bits (188), Expect = 4e-15
 Identities = 38/122 (31%), Positives = 69/122 (56%), Gaps = 9/122 (7%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARS-LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           NLL+ T      +KI DFG  +  +   D   T CG+P ++APE++    Y    D W +
Sbjct: 131 NLLLDTEGF---VKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGL 187

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G ++++++ G+ PF G ++ ++F +I+ + E+R+P      L  + + + R LLR+NP  
Sbjct: 188 GVLIYEMLVGESPFPGDDEEEVFDSIV-NDEVRYP----RFLSREAISIMRRLLRRNPER 242

Query: 134 RI 135
           R+
Sbjct: 243 RL 244

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 76.0 bits (187), Expect = 6e-15
 Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 22/159 (13%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ D+G  +  + P D   T CG+P Y+APEI++   Y    D W++G ++F+++ G+ 
Sbjct: 135 IKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 194

Query: 86  PFD--GSNQLQ-------LFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI- 135
           PFD  G +          LFQ IL    +R P      L      + +  L ++P ER+ 
Sbjct: 195 PFDIVGMSDNPDQNTEDYLFQVILEKQ-IRIP----RSLSVKASSVLKGFLNKDPKERLG 249

Query: 136 -----TFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVE 169
                 F++  +H F   +   +  EQ  V+P  KP +E
Sbjct: 250 CHPQTGFRDIKSHPFFRNIDWDL-LEQKQVLPPYKPNIE 287

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 75.4 bits (185), Expect = 7e-15
 Identities = 34/110 (30%), Positives = 65/110 (59%), Gaps = 6/110 (5%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  + ++       T CG+P Y+APEII    Y    D W+ G +L++++ G+ 
Sbjct: 140 IKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 199

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           PF+G ++ +LFQ+I+    + +P    + +  + V +C+ L+ ++P +R+
Sbjct: 200 PFEGEDEDELFQSIMEH-NVAYP----KSMSKEAVAICKGLMTKHPGKRL 244

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 74.4 bits (182), Expect = 1e-14
 Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 7/123 (5%)

Query: 27  LKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   +TP Q    T+ G+P +MAPE++    Y  K D+WS+G +  ++V G+P
Sbjct: 154 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 213

Query: 86  PFDGSNQLQLFQNILT--STELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           P+   N L+    I T  + EL+ P    E+L P   D     L  +  +R + KE   H
Sbjct: 214 PYLNENPLRALYLIATNGTPELQNP----EKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269

Query: 144 RFL 146
            FL
Sbjct: 270 PFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 74.4 bits (183), Expect = 1e-14
 Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 13/127 (10%)

Query: 26  VLKIGDFGFARSLT---PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT 82
            +K+ DFGF   ++   P+    +L G+P +MAPE+I    Y  + D+WS+G ++ ++V 
Sbjct: 153 RVKLSDFGFCAQVSKEVPR--RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVD 210

Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELH---PDCVDLCRCLLRQNPVERITFKE 139
           G+PP+     LQ  + I  +      P  ++ LH   P        +L ++P +R T  E
Sbjct: 211 GEPPYFNEPPLQAMKRIRDN-----LPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAE 265

Query: 140 FFNHRFL 146
             NH FL
Sbjct: 266 LLNHPFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 74.1 bits (183), Expect = 1e-14
 Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 40/166 (24%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD------TLCGSPLYMAPEIIQNH-KYD 65
             N+L++ + V   LK+ DFG AR  T ++ AD      TL     Y  PE++    +Y 
Sbjct: 128 GSNILINNDGV---LKLADFGLARPYTKRNSADYTNRVITL----WYRPPELLLGATRYG 180

Query: 66  AKADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNILTS------TELRFPPGAI---- 112
            + D+WSVG IL +L  GKP F GS    QL+    +  S        +   P       
Sbjct: 181 PEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKP 240

Query: 113 -------------EELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
                          + P  +DL   LL  +P +RI+  +   H +
Sbjct: 241 KKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 74.0 bits (181), Expect = 2e-14
 Identities = 45/149 (30%), Positives = 78/149 (52%), Gaps = 14/149 (9%)

Query: 27  LKIGDFGFARS-LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  +T      T CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 134 IKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 193

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   +++FP      L  D   L   LL ++P +R+       KE 
Sbjct: 194 PFYNQDHEKLFELILME-DIKFP----RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEI 248

Query: 141 FNHRFLGELR-QTVHAEQHSVVPETKPMV 168
             H F   +  Q V+ ++  +VP  KP V
Sbjct: 249 MRHSFFTGVNWQDVYDKK--LVPPFKPQV 275

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 73.2 bits (179), Expect = 2e-14
 Identities = 41/124 (33%), Positives = 66/124 (53%), Gaps = 11/124 (8%)

Query: 27  LKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG A  LT   +  +T  G+P +MAPE+I+   YD KAD+WS+G    +L  G+P
Sbjct: 140 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEP 199

Query: 86  PFDGSNQLQLFQNILTSTELRFPP---GAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
           P    + +++   I  ++    PP   G   +   + V+ C   L ++P  R T KE   
Sbjct: 200 PNSDLHPMRVLFLIPKNS----PPTLEGQYSKPFKEFVEAC---LNKDPRFRPTAKELLK 252

Query: 143 HRFL 146
           H+F+
Sbjct: 253 HKFI 256

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 73.8 bits (182), Expect = 3e-14
 Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 51/168 (30%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPL---------YMAPEI-IQNHKYDAKADLWSVGAI 76
           +K+ DFG ARSL+  +       +P+         Y APEI + + +Y    D+WSVG I
Sbjct: 146 VKLADFGLARSLSELEENP---ENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCI 202

Query: 77  LFQLVTGKPPFDGS---NQLQLFQNILTSTELRFPPGA--IEELH--------------- 116
           L +++ GKP F G+   NQL+    I+       PP A  IE +                
Sbjct: 203 LGEMLLGKPLFPGTSTLNQLEK---IIEVIG---PPSAEDIESIKSPFAATMLDSLPSRP 256

Query: 117 ------------PDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT 152
                        D +DL + LL  NP +R+T +E   H ++ +    
Sbjct: 257 RKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHNP 304

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 73.0 bits (179), Expect = 4e-14
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 5/122 (4%)

Query: 27  LKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   +TP Q    T+ G+P +MAPE++    Y  K D+WS+G +  ++V G+P
Sbjct: 154 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 213

Query: 86  PFDGSNQLQLFQNILTSTELRFP-PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHR 144
           P+   N L+    I T+       P  +  +  D ++ C   L  +  +R + KE   H 
Sbjct: 214 PYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRC---LEMDVEKRGSAKELLQHP 270

Query: 145 FL 146
           FL
Sbjct: 271 FL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 73.4 bits (180), Expect = 4e-14
 Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 6/109 (5%)

Query: 28  KIGDFGFARS-LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           K+ DFG  +  +       T CG+P Y+APEI+Q   Y    D W++G +L++++ G  P
Sbjct: 136 KLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAP 195

Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F+  N+  LF+ IL   E+ +P      L  D VD+ +  + +NP  R+
Sbjct: 196 FEAENEDDLFEAILND-EVVYP----TWLSQDAVDILKAFMTKNPTMRL 239

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 72.7 bits (178), Expect = 6e-14
 Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 20/181 (11%)

Query: 31  DFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDG 89
           DFG  + ++       T CG+P Y+APE++    YD   D W +GA+L++++ G PPF  
Sbjct: 139 DFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 198

Query: 90  SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF----NHRF 145
            N  +++ NIL +  L+  P            L   LL+++  +R+  K+ F    NH F
Sbjct: 199 RNTAEMYDNIL-NKPLQLKPNITNSAR----HLLEGLLQKDRTKRLGAKDDFMEIKNHIF 253

Query: 146 LGELRQTVHAEQHSVVPETKPMVELLNSSTPED-RH---SLHSEHPTNSSSKNPKSACSS 201
              +          + P   P     N S P D RH       E   NS  ++P S   +
Sbjct: 254 FSPINWD-DLINKKITPPFNP-----NVSGPNDLRHFDPEFTEEPVPNSIGQSPDSILVT 307

Query: 202 A 202
           A
Sbjct: 308 A 308

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 71.3 bits (175), Expect = 8e-14
 Identities = 31/90 (34%), Positives = 51/90 (56%), Gaps = 6/90 (6%)

Query: 23  VTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV 81
            T V+K+GD G  R  + +   A +L G+P YM+PE I  + Y+ K+D+WS+G +L+++ 
Sbjct: 141 ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMA 200

Query: 82  TGKPPF--DGSNQLQLFQNILTSTELRFPP 109
             + PF  D  N   L + I    +  +PP
Sbjct: 201 ALQSPFYGDKMNLYSLCKKI---EKCDYPP 227

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 71.4 bits (176), Expect = 8e-14
 Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 15/134 (11%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV+ N    V+KI DFG +R +   D      G  L   +MAPE +++ K+ +K+
Sbjct: 129 AARNCLVTEN---LVVKISDFGLSRDIYEDDYYRKRGGGKLPIKWMAPESLKDGKFTSKS 185

Query: 69  DLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           D+WS G +L+++ T G+ P+ G SN+ ++ + +     L  P    +EL+    +L  +C
Sbjct: 186 DVWSFGVLLWEIFTLGEQPYPGMSNE-EVLELLEDGYRLPRPENCPDELY----ELMLQC 240

Query: 126 LLRQNPVERITFKE 139
               +P +R TF E
Sbjct: 241 -WAYDPEDRPTFSE 253

Length = 258

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 71.4 bits (175), Expect = 1e-13
 Identities = 40/121 (33%), Positives = 62/121 (51%), Gaps = 8/121 (6%)

Query: 15  NLLVSTNE-VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           N+++  ++ VT    I DFG A+   P+    ++ G+ LY  PEI++N  Y  KAD+W+ 
Sbjct: 144 NIMLGEDDKVT----ITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAF 199

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+Q+ T +PPF  +N L L   I+ +     P G   E   D +  C   L  +   
Sbjct: 200 GCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSC---LTPDAEA 256

Query: 134 R 134
           R
Sbjct: 257 R 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 71.2 bits (175), Expect = 1e-13
 Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 13/128 (10%)

Query: 28  KIGDFGFARSL-TPQDLAD----TLCGSPLYMAPEII-QNHKYDAKADLWSVGAILFQLV 81
           KI DFG + SL    D       T  G+P +MAPE++ Q H YD KAD+WS G    +L 
Sbjct: 142 KIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELA 201

Query: 82  TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEE----LHPDCVDLCRCLLRQNPVERITF 137
           TG  P+     +++    L +       GA  +         + LC   L+++P +R T 
Sbjct: 202 TGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLC---LQKDPSKRPTA 258

Query: 138 KEFFNHRF 145
           +E   H+F
Sbjct: 259 EELLKHKF 266

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 70.8 bits (173), Expect = 1e-13
 Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 5/109 (4%)

Query: 27  LKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+GDFG AR LT P   A T  G+P Y+ PEI +N  Y+ K+D+WS+G IL++L T K 
Sbjct: 139 VKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKH 198

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
           PF  ++   L   +   +    P     EL      L + + ++NP  R
Sbjct: 199 PFQANSWKNLILKVCQGSYKPLPSHYSYELR----SLIKQMFKRNPRSR 243

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 70.6 bits (174), Expect = 1e-13
 Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 10/131 (7%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCG-SPL-YMAPEIIQNHKYDAKAD 69
           A +N LV  N V   +KI DFG +R L   D      G  P+ +MAPE ++  K+ +K+D
Sbjct: 129 AARNCLVGENLV---VKISDFGLSRDLYDDDYYRKRGGKLPIRWMAPESLKEGKFTSKSD 185

Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L+++ T G+ P+ G +  ++ + +     L  PP       P+  DL      
Sbjct: 186 VWSFGVLLWEIFTLGEQPYPGMSNEEVLEYLKNGYRLPQPPNC----PPELYDLMLQCWA 241

Query: 129 QNPVERITFKE 139
           ++P +R TF E
Sbjct: 242 EDPEDRPTFSE 252

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 70.6 bits (173), Expect = 2e-13
 Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 16/131 (12%)

Query: 27  LKIGDFGFARSLTP--QDLADTLCGSPLYMAPEIIQNHK--YDAKADLWSVGAILFQLVT 82
           + + DFG ++      ++ A + CG+  YMAPE+I+     +D   D WS+G + F+L+T
Sbjct: 144 VVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLT 203

Query: 83  GKPPF--DG--SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF- 137
           G  PF  DG  ++Q ++ + IL S +  FP      +  +  D  + LL ++P +R+   
Sbjct: 204 GASPFTVDGEQNSQSEISRRILKS-KPPFPK----TMSAEARDFIQKLLEKDPKKRLGAN 258

Query: 138 --KEFFNHRFL 146
              E  NH F 
Sbjct: 259 GADEIKNHPFF 269

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 70.0 bits (171), Expect = 3e-13
 Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 32/159 (20%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD--TLCGSPLYMAPEIIQNHKYDAKADLW 71
           +NLL+S N+V   LK+ DFGFAR+L+    A+      +  Y +PE++    Y    D+W
Sbjct: 129 ENLLISHNDV---LKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMW 185

Query: 72  SVGAILFQLVTGKPPFDG------------------SNQLQLFQNILTSTELRFP----P 109
           SVG IL +L  G+P F G                  + Q++LF +      LRFP    P
Sbjct: 186 SVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHP 245

Query: 110 GAIEE-----LHPDCVDLCRCLLRQNPVERITFKEFFNH 143
            ++E      L    +DL + LL+ NP +R   ++  NH
Sbjct: 246 QSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 70.9 bits (173), Expect = 3e-13
 Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 22/158 (13%)

Query: 27  LKIGDFGFARS-LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ D+G  +  L P D   T CG+P Y+APEI++   Y    D W++G ++F+++ G+ 
Sbjct: 135 IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 194

Query: 86  PFD--GSN-------QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI- 135
           PFD  GS+       +  LFQ IL   ++R P      L      + +  L ++P ER+ 
Sbjct: 195 PFDIVGSSDNPDQNTEDYLFQVIL-EKQIRIP----RSLSVKAASVLKSFLNKDPKERLG 249

Query: 136 -----TFKEFFNHRFLGELRQTVHAEQHSVVPETKPMV 168
                 F +   H F   +   +  EQ  VVP  KP +
Sbjct: 250 CHPQTGFADIQGHPFFRNVDWDL-MEQKQVVPPFKPNI 286

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 70.0 bits (172), Expect = 3e-13
 Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 37/161 (22%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFAR------SLTPQDLADTLCGSPLYMAPEIIQNHKYDAK 67
           QN+LV++      +KI DFG AR      +LT   +  TL     Y APE++    Y   
Sbjct: 136 QNILVTS---DGQVKIADFGLARIYSFEMALTSVVV--TL----WYRAPEVLLQSSYATP 186

Query: 68  ADLWSVGAILFQLVTGKPPFDGS---NQLQ-LFQNILTSTELRFPPGA------------ 111
            D+WSVG I  +L   +P F G+   +QL  +F  I   +E  +P               
Sbjct: 187 VDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTP 246

Query: 112 ------IEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
                 + E+  + +DL + +L  NP +RI+  E   H + 
Sbjct: 247 RSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 70.1 bits (171), Expect = 3e-13
 Identities = 42/123 (34%), Positives = 62/123 (50%), Gaps = 7/123 (5%)

Query: 27  LKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   +TP Q    T+ G+P +MAPE++    Y  K D+WS+G +  ++V G+P
Sbjct: 154 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 213

Query: 86  PFDGSNQLQLFQNILT--STELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           P+   N L+    I T  + EL+ P    E L     D     L  +   R + KE   H
Sbjct: 214 PYLNENPLRALYLIATNGTPELQNP----ERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269

Query: 144 RFL 146
            FL
Sbjct: 270 PFL 272

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 70.0 bits (172), Expect = 3e-13
 Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 49/169 (28%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEIIQNH 62
           QNLL+        LK+ DFG AR+           G P+           Y APEI+   
Sbjct: 128 QNLLIDR---EGALKLADFGLARAF----------GVPVRTYTHEVVTLWYRAPEILLGS 174

Query: 63  K-YDAKADLWSVGAILFQLVTGKPPFDGSNQL-QLFQ--NIL-TSTELRFP--------- 108
           + Y    D+WS+G I  ++V  +P F G +++ QLF+    L T  E  +P         
Sbjct: 175 RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK 234

Query: 109 -----------PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
                         +  L  D +DL   +L  +P +RI+ K    H + 
Sbjct: 235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 70.0 bits (172), Expect = 3e-13
 Identities = 51/169 (30%), Positives = 76/169 (44%), Gaps = 45/169 (26%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL--------YMAPEI-IQNHKY 64
           +N+LVS + V   LK+ DFGFAR+L  +        SPL        Y APE+ + +  Y
Sbjct: 129 ENILVSESGV---LKLCDFGFARALRARP------ASPLTDYVATRWYRAPELLVGDTNY 179

Query: 65  DAKADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNIL-------TSTE--------LR 106
               D+W++G I+ +L+ G+P F G +   QL L Q  L                   + 
Sbjct: 180 GKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVA 239

Query: 107 FP----PGAIEELHPDCV-----DLCRCLLRQNPVERITFKEFFNHRFL 146
           FP    P ++E  +P  V     D  +  LR +P ER+T  E   H + 
Sbjct: 240 FPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 69.5 bits (171), Expect = 3e-13
 Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 18/135 (13%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCG-SPL-YMAPEIIQNHKYDAKAD 69
           A +N LV  N V   +KI DFG +R L   D      G  P+ +MAPE ++  K+ +K+D
Sbjct: 130 AARNCLVGENLV---VKISDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEGKFTSKSD 186

Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L+++ T G+ P+ G +  ++ + +     L  P        P+C      L+ 
Sbjct: 187 VWSFGVLLWEIFTLGEEPYPGMSNAEVLEYLKKGYRLPKP--------PNCPPELYKLML 238

Query: 129 Q----NPVERITFKE 139
           Q    +P +R TF E
Sbjct: 239 QCWAEDPEDRPTFSE 253

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 70.9 bits (172), Expect = 3e-13
 Identities = 52/203 (25%), Positives = 82/203 (40%), Gaps = 21/203 (10%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-------PQDLADTLCGSPLYMAPEIIQ---NHK 63
           +N+L+  +    V+K+ DFG A+ L           L  T  G+P YMAPE++       
Sbjct: 130 ENILLDRDGR--VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAY 187

Query: 64  YDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPD----- 118
             + +D+WS+G  L++L+TG PPF+G          L        P     L P      
Sbjct: 188 ASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELI 247

Query: 119 ---CVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ-TVHAEQHSVVPETKPMVELLNSS 174
                DL + LL ++P  R++     +H  L  L+             ++ P+   L  S
Sbjct: 248 SKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDDSAPLRLSLPPS 307

Query: 175 TPEDRHSLHSEHPTNSSSKNPKS 197
                 SL+S   + S  K   S
Sbjct: 308 LEALISSLNSLAISGSDLKLDDS 330

Length = 384

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 69.7 bits (170), Expect = 4e-13
 Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 11/125 (8%)

Query: 27  LKIGDFGFARSLTPQDLAD--TLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
           +K+ DFGF   ++ +D+    +L G+P +MAPE+I    Y  + D+WS+G ++ ++V G+
Sbjct: 156 VKLSDFGFCAQIS-KDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGE 214

Query: 85  PPFDGSNQLQLFQNILTSTELRFPPGAIEELH---PDCVDLCRCLLRQNPVERITFKEFF 141
           PP+   + +Q  + +  S     PP  ++  H   P   D    +L + P ER T +E  
Sbjct: 215 PPYFSDSPVQAMKRLRDS-----PPPKLKNAHKISPVLRDFLERMLTREPQERATAQELL 269

Query: 142 NHRFL 146
           +H FL
Sbjct: 270 DHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 70.2 bits (172), Expect = 4e-13
 Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 34/163 (20%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQ-----DLADTLCGSPLYMAPEII-QNHKYDAKA 68
           N+ ++T ++  VLKIGDFG AR + P       L++ L  +  Y +P ++   + Y    
Sbjct: 144 NVFINTEDL--VLKIGDFGLARIVDPHYSHKGYLSEGLV-TKWYRSPRLLLSPNNYTKAI 200

Query: 69  DLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTE----------LRFPPGAIE----- 113
           D+W+ G I  +++TGKP F G+++L+  Q IL S            L   P  +      
Sbjct: 201 DMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGE 260

Query: 114 ----------ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
                      ++P+ +D    +L  NP++R+T +E   H ++
Sbjct: 261 PRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYM 303

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 70.2 bits (172), Expect = 4e-13
 Identities = 51/159 (32%), Positives = 69/159 (43%), Gaps = 39/159 (24%)

Query: 26  VLKIGDFGFARSLTPQDLADTLCGSPL---------------YMAPEIIQN-HKYDAKAD 69
           + KI DFG AR       +DTL                    Y APE++    KY    D
Sbjct: 157 ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVD 216

Query: 70  LWSVGAILFQLVTGKPPFDGSN---QLQLFQNIL-TSTELRFP---------------PG 110
           +WSVG I  +L+TGKP F G N   QL     +L T  E  +P               P 
Sbjct: 217 MWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPK 276

Query: 111 AIEELHP----DCVDLCRCLLRQNPVERITFKEFFNHRF 145
            ++ + P    D +DL + LL+ NP+ERI+ KE   H +
Sbjct: 277 DLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEY 315

Length = 335

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 70.0 bits (171), Expect = 5e-13
 Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 37/180 (20%)

Query: 31  DFGFARS-LTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPFD 88
           DFG +++ LT     +T CG+  Y+APE++ + K Y    D WS+G ++F++  G  PF 
Sbjct: 139 DFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFY 198

Query: 89  GSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE 148
             +  Q+++NI    ++RFP   + +   +     + LL +NP           HR LG 
Sbjct: 199 AEDTQQMYRNIAFG-KVRFPKNVLSD---EGRQFVKGLLNRNP----------QHR-LGA 243

Query: 149 LRQTVHAEQHS--------------VVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSKN 194
            R  V  ++H               + P  KP+V+     + ED  +   E  TNSS  N
Sbjct: 244 HRDAVELKEHPFFADIDWDLLSKKQITPPFKPIVD-----SDEDVSNFDPEF-TNSSLLN 297

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 69.5 bits (170), Expect = 6e-13
 Identities = 40/139 (28%), Positives = 67/139 (48%), Gaps = 12/139 (8%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII---QNHKYDAKADLW 71
           N+L++       +K+ DFG A  ++P   A++  G+P +MAPE+I      +YD K D+W
Sbjct: 145 NILLTEPGT---VKLADFGSASLVSP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVW 198

Query: 72  SVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
           S+G    +L   KPP    N +    +I  +           +   + VD C   L++ P
Sbjct: 199 SLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSC---LQKIP 255

Query: 132 VERITFKEFFNHRFLGELR 150
            +R + +E   HRF+   R
Sbjct: 256 QDRPSSEELLKHRFVLRER 274

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 69.0 bits (168), Expect = 7e-13
 Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 7/123 (5%)

Query: 27  LKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   +TP Q    T+ G+P +MAPE++    Y  K D+WS+G +  +++ G+P
Sbjct: 155 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214

Query: 86  PFDGSNQLQLFQNILT--STELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           P+   N L+    I T  + EL+ P    E+L     D     L  +  +R + KE   H
Sbjct: 215 PYLNENPLRALYLIATNGTPELQNP----EKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270

Query: 144 RFL 146
           +FL
Sbjct: 271 QFL 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 69.0 bits (169), Expect = 8e-13
 Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 8/131 (6%)

Query: 27  LKIGDFGFARSLTPQDLADTL-CGSPLYMAPEII---QNHK-YDAKADLWSVGAILFQLV 81
           +K+ DFG +  L    +A T+  G   YMAPE I    N K YD K+D+WS+G  + +L 
Sbjct: 143 VKLCDFGISGYLV-DSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELA 201

Query: 82  TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF 141
           TG+ P+D  +    FQ +    E   P    E+  P+  D     L++N  ER  + E  
Sbjct: 202 TGRFPYD--SWKTPFQQLKQVVEEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELL 259

Query: 142 NHRFLGELRQT 152
            H F       
Sbjct: 260 QHPFFELHLSK 270

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 68.9 bits (168), Expect = 1e-12
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 20/156 (12%)

Query: 27  LKIGDFGFARS-LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ D+G  +  L P D   T CG+P Y+APEI++  +Y    D W++G ++F+++ G+ 
Sbjct: 135 IKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRS 194

Query: 86  PF-------DGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI--- 135
           PF       D + +  LFQ IL    +R P      L      + +  L ++P ER+   
Sbjct: 195 PFDIITDNPDMNTEDYLFQVIL-EKPIRIP----RFLSVKASHVLKGFLNKDPKERLGCQ 249

Query: 136 ---TFKEFFNHRFLGELRQTVHAEQHSVVPETKPMV 168
               F +  +H F   +   +  E+  V P  KP +
Sbjct: 250 PQTGFSDIKSHTFFRSIDWDL-LEKKQVTPPFKPQI 284

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 68.1 bits (167), Expect = 1e-12
 Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 18/139 (12%)

Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHK---YDAKADL 70
           LL    +V    K+ DFG +  LT   +A   +  G+P +MAPE+    +   YD K D+
Sbjct: 133 LLTEDGDV----KLADFGVSAQLT-ATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDI 187

Query: 71  WSVGAILFQLVTGKPP-FDGSNQLQLFQNILTSTELRFPPGAIEELH---PDCVDLCRCL 126
           W++G    +L   +PP FD    L   + +   ++  FPP  +++     P   D  +  
Sbjct: 188 WALGITAIELAELQPPMFD----LHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKC 243

Query: 127 LRQNPVERITFKEFFNHRF 145
           L ++P +R T  +   H F
Sbjct: 244 LTKDPKKRPTATKLLQHPF 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 68.9 bits (169), Expect = 1e-12
 Identities = 52/163 (31%), Positives = 73/163 (44%), Gaps = 31/163 (19%)

Query: 15  NLLVSTNEVTPVLKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWS 72
           NLL++ N     LKI DFG AR +    D       +  Y APE++ N  +Y    D+WS
Sbjct: 138 NLLLNAN---CDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWS 194

Query: 73  VGAILFQLVTGKPPFDGS---NQLQLFQNILTS---TELRF--PPGA---IEEL------ 115
           VG I  +L+  KP F G    +QL+L   +L S    +L F     A   I  L      
Sbjct: 195 VGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQ 254

Query: 116 ---------HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL 149
                    +P  +DL   +L  +P +RIT +E   H +L  L
Sbjct: 255 SFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL 297

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 68.5 bits (167), Expect = 2e-12
 Identities = 40/121 (33%), Positives = 68/121 (56%), Gaps = 10/121 (8%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+  +     +K+ DFGFA+ +  +    TLCG+P Y+APEI+ N  +   AD W++
Sbjct: 160 ENLLLDKDGF---IKMTDFGFAKVVDTRTY--TLCGTPEYIAPEILLNVGHGKAADWWTL 214

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G  +++++ G PPF  +  L ++Q IL    + FP    + L  +C  L + LL  +  +
Sbjct: 215 GIFIYEILVGCPPFYANEPLLIYQKILEGI-IYFP----KFLDNNCKHLMKKLLSHDLTK 269

Query: 134 R 134
           R
Sbjct: 270 R 270

Length = 340

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 67.2 bits (164), Expect = 2e-12
 Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 9/130 (6%)

Query: 24  TPVLKIGDFGFARSL-------TPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI 76
             ++K+ DFG AR L       T  ++  ++ G+P +MAPE+I    Y  K+D+WS+G  
Sbjct: 138 NGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCT 197

Query: 77  LFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT 136
           +F++ TGKPP    ++L     I     L   P   +      +D     L ++  ER +
Sbjct: 198 VFEMATGKPPLASMDRLAAMFYIGAHRGLM--PRLPDSFSAAAIDFVTSCLTRDQHERPS 255

Query: 137 FKEFFNHRFL 146
             +   H FL
Sbjct: 256 ALQLLRHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 68.7 bits (168), Expect = 2e-12
 Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 4/94 (4%)

Query: 43  LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILT- 101
           LA +L G+P Y+APE++    Y    D WSVG IL++++ G+PPF      +    ++  
Sbjct: 200 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINW 259

Query: 102 STELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
            T L  P  A  +L  +  DL   L      +R+
Sbjct: 260 ETTLHIPSQA--KLSREASDLILRLCC-GAEDRL 290

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 67.9 bits (166), Expect = 2e-12
 Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 21/176 (11%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG ++ S+  +  A + CG+  YMAPE++    +   AD WS G ++F+++TG  
Sbjct: 137 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSL 196

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF G ++ +    IL + +L  P    + L P+   L R L ++NP  R+       +E 
Sbjct: 197 PFQGKDRKETMTMILKA-KLGMP----QFLSPEAQSLLRALFKRNPANRLGAGPDGVEEI 251

Query: 141 FNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSKNPK 196
             H F   +       +  + P  KP V       P+D      E     +S+ PK
Sbjct: 252 KRHPFFSTI-DWNKLYRREIKPPFKPAV-----GRPDDTFYFDPEF----TSRTPK 297

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 67.4 bits (164), Expect = 2e-12
 Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 5/121 (4%)

Query: 27  LKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG A  LT   +  +T  G+P +MAPE+I+   YD+KAD+WS+G    +L  G+P
Sbjct: 140 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEP 199

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           P    + +++   I  +     PP           +     L + P  R T KE   H+F
Sbjct: 200 PHSELHPMKVLFLIPKNN----PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 255

Query: 146 L 146
           +
Sbjct: 256 I 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 67.4 bits (165), Expect = 3e-12
 Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 7/126 (5%)

Query: 26  VLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII----QNHKYDAKADLWSVGAILFQLV 81
            +K+ DFG +  L          G   YMAPE I     N KYD +AD+WS+G  L +L 
Sbjct: 153 NVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELA 212

Query: 82  TGKPPFDGSN-QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF 140
           TG+ P+     + ++   IL       PP   E   PD        L ++  +R  ++E 
Sbjct: 213 TGQFPYKNCKTEFEVLTKILQEEPPSLPPN--EGFSPDFCSFVDLCLTKDHRKRPKYREL 270

Query: 141 FNHRFL 146
             H F+
Sbjct: 271 LQHPFI 276

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 67.1 bits (164), Expect = 3e-12
 Identities = 32/117 (27%), Positives = 60/117 (51%), Gaps = 9/117 (7%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           ++I D G A  L          G+P YMAPE++Q   YD   D +++G  L++++ G+ P
Sbjct: 134 VRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSP 193

Query: 87  F----DGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
           F    +   + +L +  L    + +P    ++  P+  DLC  LL+++P +R+  + 
Sbjct: 194 FRQRKEKVEKEELKRRTLE-MAVEYP----DKFSPEAKDLCEALLQKDPEKRLGCRG 245

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 66.8 bits (164), Expect = 4e-12
 Identities = 49/162 (30%), Positives = 76/162 (46%), Gaps = 40/162 (24%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARS-------LTPQDLADTLCGSPLYMAPEIIQNHK-YDA 66
           NLL++++ V   LK+ DFG ARS       +T Q +         Y APE++   + Y  
Sbjct: 132 NLLIASDGV---LKLADFGLARSFGSPNRKMTHQVVT------RWYRAPELLFGARHYGV 182

Query: 67  KADLWSVGAILFQLVTGKPPFDGSNQL-QL---FQNILTSTE---------------LRF 107
             D+WSVG I  +L+   P   G + + QL   F+ + T TE                 F
Sbjct: 183 GVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPF 242

Query: 108 PPGAIEELHP----DCVDLCRCLLRQNPVERITFKEFFNHRF 145
           PP  ++++ P    D +DL + LL  NP +RIT ++   H +
Sbjct: 243 PPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPY 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 67.3 bits (165), Expect = 4e-12
 Identities = 54/163 (33%), Positives = 75/163 (46%), Gaps = 34/163 (20%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTL---CGSPLYMAPEIIQNHKYDAKA-D 69
           NLL++TN     LKI DFG AR   P+ D    L     +  Y APEI+ N K   KA D
Sbjct: 136 NLLLNTN---CDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAID 192

Query: 70  LWSVGAILFQLVTGKPPFDGS---NQLQLFQNIL---TSTELR----------------F 107
           +WSVG IL ++++ +P F G    +QL L   +L   +  +L                  
Sbjct: 193 IWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFK 252

Query: 108 PPGAIEELHP----DCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           P     +L P      +DL   +L  NP +RIT +E   H +L
Sbjct: 253 PKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYL 295

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 68.6 bits (167), Expect = 5e-12
 Identities = 29/84 (34%), Positives = 53/84 (63%), Gaps = 3/84 (3%)

Query: 25  PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII--QNHKYDAKADLWSVGAILFQLVT 82
           P+ KIGDFG ++++  + +A +  G+P Y +PE++  +   YD K+D+W++G I+++L +
Sbjct: 179 PIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCS 238

Query: 83  GKPPFDGSNQL-QLFQNILTSTEL 105
           GK PF  +N   QL   +    +L
Sbjct: 239 GKTPFHKANNFSQLISELKRGPDL 262

Length = 1021

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 66.3 bits (162), Expect = 5e-12
 Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 29/156 (18%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLW 71
           QNLL++       LK+ DFG AR+   P +       +  Y AP+++   + Y    D+W
Sbjct: 129 QNLLINKRGE---LKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIW 185

Query: 72  SVGAILFQLVTGKPPFDGSN---QLQLFQNIL-TSTEL-------------RFPPGA--- 111
           SVG I+ +++TG+P F G+N   QL     I+ T TE               FP      
Sbjct: 186 SVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQD 245

Query: 112 ----IEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
                    P  +DL   LL+ NP  RI+  +   H
Sbjct: 246 LQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 66.6 bits (162), Expect = 6e-12
 Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 13/151 (8%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEII---QNHKYDAKADLWSVGAILFQLVTG 83
           +K+GDFG A  + P   A+   G+P +MAPE+I      +YD K D+WS+G    +L   
Sbjct: 154 VKLGDFGSASIMAP---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 210

Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           KPP    N +    +I  +       G   E   + VD C   L++ P +R T +    H
Sbjct: 211 KPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC---LQKIPQDRPTSEVLLKH 267

Query: 144 RFLGELR-QTVHAEQHSVVPETKPMVELLNS 173
           RF+   R  TV  +   ++  TK  V  L++
Sbjct: 268 RFVLRERPPTVIMD---LIQRTKDAVRELDN 295

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 66.2 bits (161), Expect = 1e-11
 Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 40/182 (21%)

Query: 43  LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILT- 101
           LA +L G+P Y+APE++    Y    D WSVG IL++++ G+PPF     L+    ++  
Sbjct: 204 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINW 263

Query: 102 STELRFPPGAIEELHPDCVDLCRCLLR-------QNPVERITFKEFFNH-RFLGELRQTV 153
            T L  PP A  +L P+  DL   L R       +N  + I    FF    F  +LRQ  
Sbjct: 264 QTSLHIPPQA--KLSPEASDLIIKLCRGPEDRLGKNGADEIKAHPFFKTIDFSSDLRQ-- 319

Query: 154 HAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSKNPKSACSSACDKVILNTGDQ 213
             +    +P+                      HPT++S+ +P        DK+  +   +
Sbjct: 320 --QSAPYIPKIT--------------------HPTDTSNFDPVDP-----DKLWSDDDKE 352

Query: 214 GN 215
           GN
Sbjct: 353 GN 354

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 65.3 bits (160), Expect = 1e-11
 Identities = 50/168 (29%), Positives = 68/168 (40%), Gaps = 52/168 (30%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEIIQNHK 63
           NLL++      +LKI DFG AR            GSPL           Y APE++   K
Sbjct: 136 NLLLNN---RGILKICDFGLAR----------EYGSPLKPYTQLVVTLWYRAPELLLGAK 182

Query: 64  -YDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNIL----TSTELRFP-----PGA-- 111
            Y    D+WSVG I  +L+T KP F G +++     I     T TE  +P     PGA  
Sbjct: 183 EYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKK 242

Query: 112 -IEELHPDC---------------VDLCRCLLRQNPVERITFKEFFNH 143
                +P                  DL   LL  +P +RI+ ++   H
Sbjct: 243 KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 64.9 bits (158), Expect = 2e-11
 Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 14/139 (10%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N+LV+T      +K+ DFG +  L    +A T  G+  YMAPE I   +Y   +D+WS+G
Sbjct: 125 NMLVNTRGQ---VKLCDFGVSTQLV-NSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLG 180

Query: 75  AILFQLVTGKPPFDG--SNQ-----LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
               +L  G+ P+     NQ     LQL Q I+       P G   E     +  C   +
Sbjct: 181 ISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQC---M 237

Query: 128 RQNPVERITFKEFFNHRFL 146
           R+ P ER   +   +H F+
Sbjct: 238 RKQPKERPAPENLMDHPFI 256

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 64.5 bits (157), Expect = 2e-11
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 11/137 (8%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQN--HKYDAKADLW 71
           N+LV+T   + V+KI DFG ++ L   +   +T  G+  YMAPE+I      Y A AD+W
Sbjct: 138 NVLVNT--YSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIW 195

Query: 72  SVGAILFQLVTGKPPFD--GSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           S+G  + ++ TGKPPF   G  Q  +F+  +       P    E L  +  +        
Sbjct: 196 SLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIP----ESLSAEAKNFILRCFEP 251

Query: 130 NPVERITFKEFFNHRFL 146
           +P +R +  +     FL
Sbjct: 252 DPDKRASAHDLLQDPFL 268

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 65.1 bits (159), Expect = 2e-11
 Identities = 54/188 (28%), Positives = 73/188 (38%), Gaps = 41/188 (21%)

Query: 1   MCYVFMIVSANACQ------NLLVSTNEVTPVLKIGDFGFARSLTP-----QDLADTLCG 49
           +C +  I SAN         NLLV+ +     LKI DFG AR  +               
Sbjct: 115 LCGLKYIHSANVLHRDLKPGNLLVNAD---CELKICDFGLARGFSENPGENAGFMTEYVA 171

Query: 50  SPLYMAPEI-IQNHKYDAKADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNIL-TSTE 104
           +  Y APEI +    Y    D+WSVG IL +L+  KP F G +   QL     +L T  E
Sbjct: 172 TRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE 231

Query: 105 -----------------LRFPPG-AIEELHP----DCVDLCRCLLRQNPVERITFKEFFN 142
                            L   P    E + P      +DL   LL  +P +RI+ +E   
Sbjct: 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291

Query: 143 HRFLGELR 150
           H +L    
Sbjct: 292 HPYLAIWH 299

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 64.3 bits (156), Expect = 3e-11
 Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 7/125 (5%)

Query: 27  LKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   ++ +     +L G+P +MAPE+I    Y  + D+WS+G ++ ++V G+P
Sbjct: 155 VKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 214

Query: 86  PFDGSNQLQLFQNILTSTELRFPP--GAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           P+     L+  + I  +     PP    + ++ P        LL ++P +R T  E   H
Sbjct: 215 PYFNEPPLKAMKMIRDN----LPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270

Query: 144 RFLGE 148
            FL +
Sbjct: 271 PFLAK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 64.1 bits (156), Expect = 3e-11
 Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 27/157 (17%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEII-QNHKYDAKADLW 71
           QNLLV  ++   +LKI D G  R+ + P         +  Y APE++  +  Y    D+W
Sbjct: 139 QNLLV--DKQKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIW 196

Query: 72  SVGAILFQLVTGKPPFDGSNQLQ----LFQNILTSTELRFP------------------- 108
           SVG I  ++   +P F G ++LQ    +F+ + T TE  +P                   
Sbjct: 197 SVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDL 256

Query: 109 PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
             A+ +L P+ +DL + +LR +P +RI+ K    H +
Sbjct: 257 SRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPY 293

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 64.5 bits (157), Expect = 3e-11
 Identities = 48/160 (30%), Positives = 68/160 (42%), Gaps = 34/160 (21%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADT-LCGSPLYMAPEIIQN-HKYDAKADLWS 72
           N+L++ N     LKI DFG AR    QD   T    +  Y APEI+    KYD + D+WS
Sbjct: 138 NILINEN---CDLKICDFGLAR---IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWS 191

Query: 73  VGAILFQLVTGKPPFDGSNQLQLF---------------QNILTSTELRF---------- 107
            G I  +++ GKP F G + +  F                 I +   LRF          
Sbjct: 192 AGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPV 251

Query: 108 P-PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           P     +   P  +DL   +L  +P +RI+  E   H +L
Sbjct: 252 PFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYL 291

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 64.3 bits (157), Expect = 3e-11
 Identities = 41/169 (24%), Positives = 64/169 (37%), Gaps = 41/169 (24%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL------------YMAPEII-QN 61
           N+L+    +   LKI DFG AR            G               Y  PE++   
Sbjct: 145 NILIDNQGI---LKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE 201

Query: 62  HKYDAKADLWSVGAILFQLVTGKPPFDGS---NQLQL-FQNILTSTELRFP-----PGA- 111
            +Y    D+W +G +  ++ T +P   G    +QL L F+   T TE  +P     PG  
Sbjct: 202 RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCE 261

Query: 112 ---------------IEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
                            +L P+ +DL   LL  +P +R+T  +   H +
Sbjct: 262 GVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPY 310

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 64.5 bits (157), Expect = 3e-11
 Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 17/141 (12%)

Query: 27  LKIGDFGFARSLTPQDLADTL--CGSPLYMAPEIIQ------NHKYDAKADLWSVGAILF 78
           +K+ DFG A  LT   + ++    G+P Y+APE++          Y  + D WS+G I +
Sbjct: 141 IKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAY 200

Query: 79  QLVTGKPPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVERITF 137
           +++ G+ PF      + + NI+     L+FP     ++  D +DL + LL     ER+ +
Sbjct: 201 EMIYGRSPFHEGTSAKTYNNIMNFQRFLKFP--EDPKVSSDFLDLIQSLL-CGQKERLGY 257

Query: 138 KEFFNHRFL-----GELRQTV 153
           +    H F        +R ++
Sbjct: 258 EGLCCHPFFSKIDWNNIRNSL 278

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 63.9 bits (155), Expect = 3e-11
 Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 15/127 (11%)

Query: 27  LKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   ++ +     +L G+P +MAPE+I    Y  + D+WS+G ++ +++ G+P
Sbjct: 157 IKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP 216

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHP------DCVDLCRCLLRQNPVERITFKE 139
           P+     LQ  + I  +     PP  +++ H         +DL   +L + P +R T +E
Sbjct: 217 PYFNEPPLQAMRRIRDN----LPP-RVKDSHKVSSVLRGFLDL---MLVREPSQRATAQE 268

Query: 140 FFNHRFL 146
              H FL
Sbjct: 269 LLQHPFL 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 63.7 bits (155), Expect = 4e-11
 Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 10/132 (7%)

Query: 12  ACQNLLVSTNEVTP--VLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDA 66
           A +N LVS        V+KIGDFG AR +   D         L   +MAPE + + K+  
Sbjct: 133 AARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTT 192

Query: 67  KADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRC 125
           ++D+WS G ++++++T G+ P+   N  ++ Q++     L+ P    ++++   +  C  
Sbjct: 193 QSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCPDKIY-QLMTNC-- 249

Query: 126 LLRQNPVERITF 137
              Q+P ER TF
Sbjct: 250 -WAQDPSERPTF 260

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 63.6 bits (155), Expect = 4e-11
 Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 31/160 (19%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPE-IIQNHKYDAKADLW 71
           +N+LVS + V    K+ DFGFAR+L  P ++      +  Y APE ++ + KY    D+W
Sbjct: 129 ENILVSQSGVV---KLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIW 185

Query: 72  SVGAILFQLVTGKPPFDGSNQL-QLF-------------QNILTSTEL----RFP----P 109
           +VG ++ +++TG+P F G + + QL+             Q I     L    R P     
Sbjct: 186 AVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEI 245

Query: 110 GAIEELHPD----CVDLCRCLLRQNPVERITFKEFFNHRF 145
             +E+  P      +DL +  LR +P +R +  +  +H F
Sbjct: 246 EPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 63.9 bits (156), Expect = 6e-11
 Identities = 47/177 (26%), Positives = 72/177 (40%), Gaps = 53/177 (29%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL--------------YMAPEIIQ 60
           NLLV+ +     L+IGDFG AR L           SP               Y APE++ 
Sbjct: 137 NLLVNED---CELRIGDFGMARGL---------SSSPTEHKYFMTEYVATRWYRAPELLL 184

Query: 61  N-HKYDAKADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNILTSTELRF--------- 107
           +  +Y    D+WSVG I  +++  +  F G N   QL+L  ++L S              
Sbjct: 185 SLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRV 244

Query: 108 ----------PPGAIEEL----HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                      P    ++     P+ +DL   +L+ +P ERIT ++   H FL +  
Sbjct: 245 RKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYH 301

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 63.1 bits (154), Expect = 6e-11
 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 29/157 (18%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPE-IIQNHKYDAKADLWS 72
           +N+L+  +    +LK+ DFG  R +  +        +  Y APE ++ +  Y  K D+W+
Sbjct: 129 ENILIKDD----ILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWA 184

Query: 73  VGAILFQLVTGKPPFDGSNQL-----------------QLFQNILTSTELRFP---PGAI 112
           VG + F++++  P F G+N+L                              FP      +
Sbjct: 185 VGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGL 244

Query: 113 EELHPD----CVDLCRCLLRQNPVERITFKEFFNHRF 145
            +L P+     +DL + LL  +P ERIT K+   H +
Sbjct: 245 RKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 62.9 bits (153), Expect = 7e-11
 Identities = 48/173 (27%), Positives = 73/173 (42%), Gaps = 48/173 (27%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEII-QN 61
           QNLL+  +  T  LK+ DFG AR+           G P+           Y APEI+  +
Sbjct: 131 QNLLI--DRRTNALKLADFGLARAF----------GIPVRTFTHEVVTLWYRAPEILLGS 178

Query: 62  HKYDAKADLWSVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP--------- 108
             Y    D+WSVG I  ++V  KP F G +++    ++F+ + T  E  +P         
Sbjct: 179 RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYK 238

Query: 109 -----------PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                         +  L P  VDL   +LR +P +RIT +    H +  +L 
Sbjct: 239 SAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG 291

Length = 294

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 62.3 bits (151), Expect = 9e-11
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 6/114 (5%)

Query: 24  TPVLKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT 82
           T V+K+GD G  R  + +  A  +L G+P YM+PE I  + Y+ K+D+WS+G +L+++  
Sbjct: 142 TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 201

Query: 83  GKPPF--DGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
            + PF  D  N   L Q I    +  +PP   E       +L    +  +P +R
Sbjct: 202 LQSPFYGDKMNLFSLCQKI---EQCDYPPLPTEHYSEKLRELVSMCIYPDPDQR 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 62.8 bits (153), Expect = 1e-10
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 10/107 (9%)

Query: 43  LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTS 102
           LA +  G+P Y+APE+     Y+ + D WS+G I+++++ G PPF   N  + ++ I+  
Sbjct: 195 LAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINW 254

Query: 103 TE-LRFPPGAIEELHPDCVDL-CRCL------LRQNPVERITFKEFF 141
            E L+FP      L P+  DL  R        L  N V  I    FF
Sbjct: 255 KETLQFPDEV--PLSPEAKDLIKRLCCEAERRLGNNGVNEIKSHPFF 299

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 61.3 bits (149), Expect = 2e-10
 Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 18/133 (13%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV  N +    K+ DFG AR +  +D+ +   G+     + APE    +++  K+
Sbjct: 130 AARNVLVGENNI---CKVADFGLARVIK-EDIYEAREGAKFPIKWTAPEAALYNRFSIKS 185

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHP---DCVDLCR 124
           D+WS G +L ++VT G+ P+ G    ++ Q +     +  PPG  +EL+    DC     
Sbjct: 186 DVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLDC----- 240

Query: 125 CLLRQNPVERITF 137
              +++P +R TF
Sbjct: 241 --WKEDPDDRPTF 251

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 61.2 bits (148), Expect = 2e-10
 Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 2/87 (2%)

Query: 24  TPVLKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT 82
           T V+K+GD G  R  + +  A  +L G+P YM+PE I  + Y+ K+D+WS+G +L+++  
Sbjct: 142 TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 201

Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPP 109
            + PF G +++ L+       +  +PP
Sbjct: 202 LQSPFYG-DKMNLYSLCKKIEQCDYPP 227

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 61.6 bits (150), Expect = 2e-10
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 11/132 (8%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +V+ +     +KIGDFG  R +   D         L   +MAPE +++  +  K+
Sbjct: 146 AARNCMVAEDLT---VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKS 202

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T  + P+ G +  ++ + ++    L  P    ++L     +L R   
Sbjct: 203 DVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPENCPDKLL----ELMRMCW 258

Query: 128 RQNPVERITFKE 139
           + NP  R TF E
Sbjct: 259 QYNPKMRPTFLE 270

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 61.0 bits (148), Expect = 3e-10
 Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 7/75 (9%)

Query: 27  LKIGDFGFARSLTPQDLADT-------LCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ 79
           +KI DFG ++ L    L+         L GS  +MAPE+++   Y  KAD+WS+G ++ +
Sbjct: 145 IKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVE 204

Query: 80  LVTGKPPFDGSNQLQ 94
           ++TGK PF    QLQ
Sbjct: 205 MLTGKHPFPDCTQLQ 219

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 61.5 bits (150), Expect = 3e-10
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 53  YMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAI 112
           Y+APE+I    + +  D W++G +L++++ G  PF GSN+ + F NIL   E+ FP    
Sbjct: 198 YIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKK-EVTFPGSP- 255

Query: 113 EELHPDCVDLCRCLLRQNPVERITFK----EFFNHRF 145
             +     DL R LL ++P +R+  K    E   H F
Sbjct: 256 -PVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPF 291

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 61.5 bits (150), Expect = 3e-10
 Identities = 56/180 (31%), Positives = 77/180 (42%), Gaps = 49/180 (27%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN--HKYDAKADLWSVGAILFQLVTGK 84
           LKI DFG AR     D       +  Y APEI+ N  H Y+   D+WSVG I+ +L+TGK
Sbjct: 157 LKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMH-YNQTVDIWSVGCIMAELLTGK 213

Query: 85  PPFDGSN---QLQLFQNI-----------LTSTELR-----FP-----------PGAIEE 114
             F GS+   QL+   N+           ++S   R      P            GA   
Sbjct: 214 TLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGA--- 270

Query: 115 LHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSS 174
            +P  +DL   +L  +P +RIT  E   H +L        AE H   PE +P+    + S
Sbjct: 271 -NPLAIDLLEKMLVLDPDKRITAAEALAHPYL--------AEYHD--PEDEPVAPPYDQS 319

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 61.8 bits (150), Expect = 3e-10
 Identities = 48/146 (32%), Positives = 72/146 (49%), Gaps = 14/146 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S N V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 200 AARNILLSENNV---VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQS 256

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F   L   T +R P  A  E++     +  C 
Sbjct: 257 DVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYS---IMLDC- 312

Query: 127 LRQNPVERITFKEFFNHRFLGELRQT 152
              NP +R TF E      LG+L Q 
Sbjct: 313 WHNNPEDRPTFSELVEI--LGDLLQE 336

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 60.8 bits (147), Expect = 3e-10
 Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 16/127 (12%)

Query: 27  LKIGDFGFARSLTPQDLADT----LCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT 82
           +K+GDFG ++ +    ++ T    + G+P +M+PE+I    Y  KAD+WSV   + +++T
Sbjct: 145 VKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLT 204

Query: 83  GKPPFDGSNQLQLFQNILTS-TELRFPPGAIEELHPDCVDLCRCLLRQNPVE---RITFK 138
            KPP+     +     I T  T+   P G          D CR  L+Q  VE   R T +
Sbjct: 205 EKPPWAEYEAMAAIFKIATQPTKPMLPDGV--------SDACRDFLKQIFVEEKRRPTAE 256

Query: 139 EFFNHRF 145
               H F
Sbjct: 257 FLLRHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 60.8 bits (147), Expect = 3e-10
 Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 16/128 (12%)

Query: 27  LKIGDFGFARSLTPQDLADT----LCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT 82
           +K+GDFG ++ L    L+ T    + G+P +M+PE+I    Y  KAD+WSVG  + +++T
Sbjct: 145 VKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLT 204

Query: 83  GKPPFDGSNQLQLFQNILTS-TELRFPPGAIEELHPDCVDLCRCLLRQNPVE---RITFK 138
            KPP+     +     I T  T    P        P   D CR  L++  VE   R +  
Sbjct: 205 EKPPWAEFEAMAAIFKIATQPTNPVLP--------PHVSDHCRDFLKRIFVEAKLRPSAD 256

Query: 139 EFFNHRFL 146
           E   H F+
Sbjct: 257 ELLRHTFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 60.6 bits (147), Expect = 3e-10
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 9/137 (6%)

Query: 15  NLLVSTNEVTPVLKIGDFGFAR---SLTPQDLADTLCGSPLYMAPEIIQNHK--YDAKAD 69
           NLLV   +   + KI DFG ++    +   D   ++ GS  +MAPE+I ++   Y AK D
Sbjct: 138 NLLV---DADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVD 194

Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQ-LFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS+G ++ ++  G+ P+     +  +F+     +    PP     L P  +D       
Sbjct: 195 IWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFT 254

Query: 129 QNPVERITFKEFFNHRF 145
            NP  R T +E   H F
Sbjct: 255 INPDNRPTARELLQHPF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 60.4 bits (147), Expect = 3e-10
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 13/138 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV  N    V KI DFG AR L   D      G+     + APE     ++  K+
Sbjct: 130 AARNILVGEN---LVCKIADFGLAR-LIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKS 185

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L ++VT G+ P+ G    ++ + +     +  PP   EEL+     + +C  
Sbjct: 186 DVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELY---DLMLQC-W 241

Query: 128 RQNPVERITFKEFFNHRF 145
            ++P ER TF E+     
Sbjct: 242 DKDPEERPTF-EYLQSFL 258

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 61.3 bits (148), Expect = 4e-10
 Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 11/150 (7%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEII---QNHKYDAKADLWSVGAILFQLVTG 83
           +K+ DFG A   +P   A++  G+P +MAPE+I      +YD K D+WS+G    +L   
Sbjct: 164 VKLADFGSASIASP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 220

Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           KPP    N +    +I  +           +   + VD C   L++ P +R T +E   H
Sbjct: 221 KPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSC---LQKIPQDRPTSEELLKH 277

Query: 144 RFLGELRQTVHAEQHSVVPETKPMVELLNS 173
            F+  LR+        ++  TK  V  L++
Sbjct: 278 MFV--LRERPETVLIDLIQRTKDAVRELDN 305

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 60.6 bits (147), Expect = 4e-10
 Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 19/146 (13%)

Query: 15  NLLVSTN-EVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII------QNHKYDAK 67
           N+LV+ N +V    K+ DFG + +L    LA T  G   YMAPE I      QN  Y  +
Sbjct: 133 NVLVNGNGQV----KLCDFGVSGNLV-ASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQ 187

Query: 68  ADLWSVGAILFQLVTGK---PPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCR 124
           +D+WS+G  + ++  G+   PP   +N       I+       PP        D  D   
Sbjct: 188 SDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD----PPTLPSGYSDDAQDFVA 243

Query: 125 CLLRQNPVERITFKEFFNHRFLGELR 150
             L + P  R T+ +   H +L + +
Sbjct: 244 KCLNKIPNRRPTYAQLLEHPWLVKYK 269

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 60.6 bits (147), Expect = 4e-10
 Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 49/168 (29%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEIIQNH 62
           QNLL++T      +K+ DFG AR+           G P+           Y APEI+   
Sbjct: 129 QNLLINTEGA---IKLADFGLARAF----------GVPVRTYTHEVVTLWYRAPEILLGC 175

Query: 63  KYDAKA-DLWSVGAILFQLVTGKPPFDGSNQL-QLFQNILT-----------STEL---- 105
           KY + A D+WS+G I  ++VT +  F G +++ QLF+   T            T L    
Sbjct: 176 KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYK 235

Query: 106 ----RFPPGAIEE----LHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
               ++      +    L  D  DL   +L  +P +RI+ K    H F
Sbjct: 236 PSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 60.1 bits (146), Expect = 5e-10
 Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 32/173 (18%)

Query: 11  NACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEII-----QNHKY 64
            A   LL    +V    K+ DFG +          DT  G+P +MAPE++     +++ Y
Sbjct: 130 KAGNILLTLDGDV----KLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPY 185

Query: 65  DAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVD--- 121
           D KAD+WS+G  L +L   +PP    N +++   IL S      P  +++          
Sbjct: 186 DYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS-----EPPTLDQPSKWSSSFND 240

Query: 122 -LCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNS 173
            L  CL++ +P +R T  E   H F+            S   + K + +LL  
Sbjct: 241 FLKSCLVK-DPDDRPTAAELLKHPFV------------SDQSDNKAIKDLLAE 280

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 60.4 bits (146), Expect = 5e-10
 Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 24/159 (15%)

Query: 27  LKIGDFGF-ARSLTPQDLADTLCGSPLYMAPEII-----QNHKYDAKADLWSVGAILFQL 80
           +K+ DFG  A+++      D+  G+P +MAPE++     ++  YD KAD+WS+G  L ++
Sbjct: 149 IKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 208

Query: 81  VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIE--ELHPDCVDLCRCLLRQNPVERITFK 138
              +PP    N +++   I  S     PP   +  +   +  D  +  L ++P  R +  
Sbjct: 209 AQIEPPHHELNPMRVLLKIAKSE----PPTLSQPSKWSMEFRDFLKTALDKHPETRPSAA 264

Query: 139 EFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPE 177
           +   H F+            S V   +P+ EL+  +  E
Sbjct: 265 QLLEHPFV------------SSVTSNRPLRELVAEAKAE 291

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 60.7 bits (147), Expect = 6e-10
 Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 12/112 (10%)

Query: 31  DFGFARSLTPQDLADT--LCGSPLYMAPEIIQNHKYDAKA-DLWSVGAILFQLVTGKPPF 87
           DFG ++    ++   T   CG+  YMAPEII+      KA D WS+G ++F+L+TG  PF
Sbjct: 148 DFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPF 207

Query: 88  ----DGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
               + + Q ++ + IL   +  FP      + P+  DL   LLR++P +R+
Sbjct: 208 TLEGERNTQSEVSRRIL-KCDPPFPS----FIGPEAQDLLHKLLRKDPKKRL 254

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 61.8 bits (150), Expect = 6e-10
 Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 11/129 (8%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTL--------CGSPLYMAPEIIQNHKYD 65
           QN++VS   V P  K+ DFG    L     AD           G+P Y APE ++     
Sbjct: 108 QNIMVSQTGVRPHAKVLDFGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVT 167

Query: 66  AKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRC 125
             +DL++ G I  + +TG+    G++  ++    L+  ++  PP  I   HP    + R 
Sbjct: 168 PNSDLYAWGLIFLECLTGQRVVQGASVAEILYQQLSPVDVSLPP-WIAG-HP-LGQVLRK 224

Query: 126 LLRQNPVER 134
            L ++P +R
Sbjct: 225 ALNKDPRQR 233

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 60.1 bits (146), Expect = 7e-10
 Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 11/132 (8%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ + V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 159 AARNVLVTEDHV---MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQS 215

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T G  P+ G    +LF+ +     +  P    +EL+     +  C  
Sbjct: 216 DVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCTQELY---HLMRDC-W 271

Query: 128 RQNPVERITFKE 139
            + P +R TFK+
Sbjct: 272 HEVPSQRPTFKQ 283

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 59.6 bits (144), Expect = 9e-10
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 9/113 (7%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           ++I D G A  +   +      G+  YMAPE+I N KY    D W +G ++++++ G+ P
Sbjct: 141 IRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSP 200

Query: 87  FDGSNQL----QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F    +     ++ + +    E        E+   D   +CR LL +NP ER+
Sbjct: 201 FRKRKERVKREEVDRRVKEDQE-----EYSEKFSEDAKSICRMLLTKNPKERL 248

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 59.7 bits (144), Expect = 1e-09
 Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 9/123 (7%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEII---QNHKYDAKADLWSVGAILFQLVTG 83
           +K+ DFG A   +P   A++  G+P +MAPE+I      +YD K D+WS+G    +L   
Sbjct: 160 VKLADFGSASKSSP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAER 216

Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           KPP    N +    +I  +           +     VD C   L++ P ER    E   H
Sbjct: 217 KPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYC---LQKIPQERPASAELLRH 273

Query: 144 RFL 146
            F+
Sbjct: 274 DFV 276

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 59.9 bits (145), Expect = 1e-09
 Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 7/88 (7%)

Query: 43  LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTS 102
           +A +  G+P Y+APEI     Y  + D WS+GAI+F+ + G PPF   N  + ++ I+  
Sbjct: 204 MAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINW 263

Query: 103 TE-LRFPPGAIEELH--PDCVDLCRCLL 127
            E L FP    +++H   +  DL R L+
Sbjct: 264 RETLYFP----DDIHLSVEAEDLIRRLI 287

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 59.1 bits (143), Expect = 1e-09
 Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           ++I D G A  +   +      G+  YMAPE+++N +Y    D W +G ++++++ GK P
Sbjct: 141 IRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSP 200

Query: 87  FDGSNQL----QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F    +     ++ + +    E        E+       +CR LL ++P  R+
Sbjct: 201 FRQRKEKVKREEVERRVKEDQEEY-----SEKFSEAARSICRQLLTKDPGFRL 248

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 58.7 bits (142), Expect = 2e-09
 Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 2/114 (1%)

Query: 27  LKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           ++I D G A  L   Q       G+P +MAPE++Q  +YD   D +++G  L++++  + 
Sbjct: 136 VRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARG 195

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
           PF    + ++    L    L       ++  P     C  LL ++P +R+ F++
Sbjct: 196 PFRARGE-KVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRD 248

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 58.5 bits (141), Expect = 2e-09
 Identities = 29/112 (25%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           ++I D G A  +          G+  YMAPE+++N +Y    D W++G +L++++ G+ P
Sbjct: 141 IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 200

Query: 87  FDGSN---QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F       + +  + ++   +  +     E+  PD   LC+ LL ++P ER+
Sbjct: 201 FQQRKKKIKREEVERLVKEVQEEYS----EKFSPDARSLCKMLLCKDPKERL 248

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 58.4 bits (142), Expect = 2e-09
 Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 31/149 (20%)

Query: 14  QNLLVSTN-EVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEII---QNHK--YDA 66
           QN+L++ N EV    K+ DFG +  L       +T  G+P +MAPE+I   +     YDA
Sbjct: 142 QNILLTKNAEV----KLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDA 197

Query: 67  KADLWSVGAILFQLVTGKPPF-DGSNQLQLFQNILTSTELRFPPGAIEELHP-------- 117
           ++D+WS+G    +L  GKPP  D      LF+ I      R PP  +    P        
Sbjct: 198 RSDVWSLGITAIELADGKPPLCDMHPMRALFK-I-----PRNPPPTL--KSPENWSKKFN 249

Query: 118 DCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           D +  C   L +N  +R   +E   H F+
Sbjct: 250 DFISEC---LIKNYEQRPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 59.9 bits (145), Expect = 2e-09
 Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 2/97 (2%)

Query: 49  GSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP 108
           G+P Y+APE++    +    D W++G  LF+ +TG PPF+     Q+FQNIL + ++ +P
Sbjct: 542 GTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNIL-NRDIPWP 600

Query: 109 PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
            G  E+L  +  +    LL  +P +R   KE   H  
Sbjct: 601 EGE-EKLSVNAQNAIEILLTMDPTKRAGLKELKQHPL 636

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 58.2 bits (141), Expect = 3e-09
 Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 39/166 (23%)

Query: 15  NLLVSTN-EVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           N+LV++  E+    K+ DFG +  L    +A++  G+  YM+PE +Q   Y  ++D+WS+
Sbjct: 130 NILVNSRGEI----KLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYTVQSDIWSL 184

Query: 74  GAILFQLVTGK---PPFDGSNQLQLFQNILTSTELRFP-------------PGAIEEL-- 115
           G  L ++  G+   PP D      +F   ++  E +               P AI EL  
Sbjct: 185 GLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLD 244

Query: 116 ---------------HPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
                            +  D     L++NP ER   KE   H F+
Sbjct: 245 YIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI 290

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 57.7 bits (139), Expect = 4e-09
 Identities = 28/116 (24%), Positives = 57/116 (49%), Gaps = 7/116 (6%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           ++I D G A  +   +      G+  YMAPE++ N +Y    D W +G ++++++ G+ P
Sbjct: 141 IRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSP 200

Query: 87  FDGSNQLQLFQNI---LTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
           F G  +    + +   +  TE  +     E    +   +C+ LL ++P +R+  +E
Sbjct: 201 FRGRKEKVKREEVDRRVLETEEVYSAKFSE----EAKSICKMLLTKDPKQRLGCQE 252

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 57.7 bits (139), Expect = 4e-09
 Identities = 39/132 (29%), Positives = 69/132 (52%), Gaps = 11/132 (8%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+LV+       +KI DFG +R +  +D  +  +    P+ +MA E + +H Y  ++
Sbjct: 154 AARNVLVAEGRK---MKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQS 210

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++VT G  P+ G    +LF  + T   +  P    EE++    +L     
Sbjct: 211 DVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMY----NLMLTCW 266

Query: 128 RQNPVERITFKE 139
           +Q P +R TF +
Sbjct: 267 KQEPDKRPTFAD 278

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 58.2 bits (141), Expect = 4e-09
 Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 22/169 (13%)

Query: 27  LKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDA----KADLWSVGAILFQL 80
           LK+ DFG    +    +   DT  G+P Y++PE++++   D     + D WSVG  L+++
Sbjct: 181 LKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 240

Query: 81  VTGKPPFDGSNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCLLRQNPVE--RITF 137
           + G  PF   + +  +  I+     L FP     E+     DL    L    V   R   
Sbjct: 241 LVGDTPFYADSLVGTYSKIMDHKNSLTFPDDI--EISKQAKDLICAFLTDREVRLGRNGV 298

Query: 138 KEFFNHRFL-------GELRQTVHAEQHSVVPETKPMVELLNSSTPEDR 179
            E  +H F          +R+TV      VVPE    ++  N    ED 
Sbjct: 299 DEIKSHPFFKNDQWTFDNIRETV----APVVPELSSDIDTSNFDDIEDD 343

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 57.4 bits (139), Expect = 4e-09
 Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 31/160 (19%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLC-GSPLYMAPE-IIQNHKYDAKADLW 71
           +N+L++       +K+ DFGFAR LT      T    +  Y APE ++ + +Y    D+W
Sbjct: 129 ENILITKQGQ---IKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVW 185

Query: 72  SVGAILFQLVTGKPPFDGS---NQL---------------QLFQN-------ILTSTELR 106
           ++G +  +L+TG+P + G    +QL               Q+F          +   E R
Sbjct: 186 AIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETR 245

Query: 107 FP-PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
            P       +    +   +  L+ +P ER++ +E   H +
Sbjct: 246 EPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 57.4 bits (139), Expect = 5e-09
 Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 49/169 (28%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEII-QN 61
           QNLL+    V   +K+ DFG AR+           G P+           Y APE++  +
Sbjct: 130 QNLLIDNKGV---IKLADFGLARAF----------GIPVRVYTHEVVTLWYRAPEVLLGS 176

Query: 62  HKYDAKADLWSVGAILFQLVTGKPPFDGSNQL-QLFQ--NIL-TSTELRFP--------- 108
            +Y    D+WS+G I  ++ T KP F G +++ QLF+   IL T TE  +P         
Sbjct: 177 PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYK 236

Query: 109 -----------PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
                        A++ L  D +DL   +L  +P +RI+ K+  NH + 
Sbjct: 237 NTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 56.7 bits (137), Expect = 6e-09
 Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 9/129 (6%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADL 70
           A +N+LV  + V    K+ DFG AR +     L+        + APE   +  +  K+D+
Sbjct: 131 AARNILVGEDLVC---KVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDV 187

Query: 71  WSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           WS G +L+++ T G+ P+ G N  +++  I     +  P    +E++     +       
Sbjct: 188 WSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIY----KIMLECWAA 243

Query: 130 NPVERITFK 138
            P +R +FK
Sbjct: 244 EPEDRPSFK 252

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 56.7 bits (137), Expect = 8e-09
 Identities = 39/153 (25%), Positives = 66/153 (43%), Gaps = 22/153 (14%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
            N+L++       +K+ DFG +  L    LA T  G+  YMAPE IQ   Y   +D+WS+
Sbjct: 134 SNILLTRKGQ---VKLCDFGVSGELV-NSLAGTFTGTSFYMAPERIQGKPYSITSDVWSL 189

Query: 74  GAILFQLVTGKPPF--DGSNQL---QLFQNILTSTELRFPPGAIEELHPDCV-------D 121
           G  L ++   + PF  +G   L   +L   I+        P   +E              
Sbjct: 190 GLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM----PNPELKDEPGNGIKWSEEFKDF 245

Query: 122 LCRCLLRQNPVERITFKEFFNHRF-LGELRQTV 153
           + +CL + +P  R T  +   H +   ++++ V
Sbjct: 246 IKQCLEK-DPTRRPTPWDMLEHPWIKAQMKKKV 277

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 56.9 bits (137), Expect = 8e-09
 Identities = 33/113 (29%), Positives = 65/113 (57%), Gaps = 13/113 (11%)

Query: 31  DFGFARSLTPQDL--ADTLCGSPLYMAPEIIQ--NHKYDAKADLWSVGAILFQLVTGKPP 86
           DFG ++     ++  A + CG+  YMAP+I++  +  +D   D WS+G ++++L+TG  P
Sbjct: 148 DFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASP 207

Query: 87  F----DGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F    + ++Q ++ + IL S E  +P    +E+     D+ + LL ++P +R+
Sbjct: 208 FTVDGEKNSQAEISRRILKS-EPPYP----QEMSALAKDIIQRLLMKDPKKRL 255

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 57.3 bits (138), Expect = 9e-09
 Identities = 41/153 (26%), Positives = 61/153 (39%), Gaps = 29/153 (18%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR  T  ++   +  +  Y APE+I N   Y    D+WSVG I+ +++TGKP
Sbjct: 157 LKILDFGLARQ-TDSEMTGYVV-TRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKP 214

Query: 86  PFDGSNQLQLFQNI--------------LTSTELRFPPGAIEEL------------HPDC 119
            F G + L     I              L S + +     +               +P  
Sbjct: 215 LFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLA 274

Query: 120 VDLCRCLLRQNPVERITFKEFFNHRFLGELRQT 152
           V++   +L  +   RIT  E   H +  E    
Sbjct: 275 VNVLEKMLVLDAESRITAAEALAHPYFEEFHDP 307

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 56.2 bits (135), Expect = 9e-09
 Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 8/123 (6%)

Query: 27  LKIGDFGFARSLTPQDLADT----LCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT 82
           +K+GDFG ++ L    ++ T    + G+P +M+PE+I    Y  KAD+WS+G  + +++T
Sbjct: 145 VKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLT 204

Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
            KPP+     +     I T       P  I E      D   C+  +    R + +E   
Sbjct: 205 EKPPWAEYEAMAAIFKIATQPTNPQLPSHISE---HARDFLGCIFVEAR-HRPSAEELLR 260

Query: 143 HRF 145
           H F
Sbjct: 261 HPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 56.3 bits (136), Expect = 9e-09
 Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 13/133 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL----YMAPEIIQNHKYDAK 67
           A +N LV  + V   +KIGDFG +R +   D    + G  +    +M PE I   K+  +
Sbjct: 149 ATRNCLVGYDLV---VKIGDFGMSRDVYTTDYY-RVGGHTMLPIRWMPPESIMYRKFTTE 204

Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           +D+WS G +L+++ T GK P+ G +  ++ + I     L+ P     E++    D+    
Sbjct: 205 SDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRPRTCPSEVY----DIMLGC 260

Query: 127 LRQNPVERITFKE 139
            +++P +RI  K+
Sbjct: 261 WKRDPQQRINIKD 273

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 25/154 (16%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QN+LV++   +  +K+ DFG AR  + Q    ++  +  Y APE++    Y    DLWSV
Sbjct: 139 QNILVTS---SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSV 195

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILT----------STELRFPPGA--------IEEL 115
           G I  ++   KP F GS+ +     IL             ++  P  A        IE+ 
Sbjct: 196 GCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKF 255

Query: 116 HPDCVDLCRCLLRQ----NPVERITFKEFFNHRF 145
             D  +L + LL +    NP +RI+     +H +
Sbjct: 256 VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 56.3 bits (136), Expect = 1e-08
 Identities = 48/169 (28%), Positives = 72/169 (42%), Gaps = 50/169 (29%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEIIQNH 62
           QNLL++ N     LK+ DFG AR+           G P+           Y  P+++   
Sbjct: 128 QNLLINKNGE---LKLADFGLARAF----------GIPVRCYSAEVVTLWYRPPDVLFGA 174

Query: 63  K-YDAKADLWSVGAILFQLVT-GKPPFDGS---NQLQLFQNIL-TSTELRFP-------- 108
           K Y    D+WS G I  +L   G+P F G+   +QL+    +L T TE  +P        
Sbjct: 175 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDY 234

Query: 109 ------PGA------IEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
                 P        + +L+    DL + LL  NPV+RI+ +E   H +
Sbjct: 235 KPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 56.7 bits (137), Expect = 1e-08
 Identities = 50/175 (28%), Positives = 71/175 (40%), Gaps = 43/175 (24%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCG------SPLYMAPEIIQNHK-YDAK 67
           NLLV++N    VLKI DFG AR   P    D          +  Y APEI+   + Y + 
Sbjct: 133 NLLVNSN---CVLKICDFGLARVEEP----DESKHMTQEVVTQYYRAPEILMGSRHYTSA 185

Query: 68  ADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNILTSTELRFPPGAIEE---------L 115
            D+WSVG I  +L+  +  F   +   QL L  ++L +  L     A E           
Sbjct: 186 VDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPH 245

Query: 116 HPDCVD----------------LCRCLLRQNPVERITFKEFFNHRFLGELRQTVH 154
            P  +                 LCR +L  +P +RI+  +   H +L E R   H
Sbjct: 246 KPPSLPVLYTLSSQATHEAVHLLCR-MLVFDPDKRISAADALAHPYLDEGRLRYH 299

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 10/131 (7%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFAR-SLTPQDLADTLCGSPL-YMAPEIIQNHKYDAKAD 69
           A +N LV  + V   +K+ DFG AR  L  Q  +      P+ +  PE+    ++ +K+D
Sbjct: 127 AARNCLVGEDNV---VKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSD 183

Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +++++ + GK P++  +  ++ +++     L  P  A  E++     +  C   
Sbjct: 184 VWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVY---TIMYSCWH- 239

Query: 129 QNPVERITFKE 139
           + P +R  FK+
Sbjct: 240 EKPEDRPAFKK 250

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 55.4 bits (133), Expect = 2e-08
 Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 25/153 (16%)

Query: 27  LKIGDFGF-ARSLTPQDLADTLCGSPLYMAPEII-----QNHKYDAKADLWSVGAILFQL 80
           +K+ DFG  A++       D+  G+P +MAPE++     ++  YD KAD+WS+G  L ++
Sbjct: 142 IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 201

Query: 81  VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIE--ELHPDCVDLCRCLLRQNPVERITFK 138
              +PP    N +++   I  S     PP   +      +  D  +  L +N   R T  
Sbjct: 202 AQIEPPHHELNPMRVLLKIAKSE----PPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTT 257

Query: 139 EFFNHRFLGELRQTVHAEQHSVVPETKPMVELL 171
           +   H F+              V   KP+ EL+
Sbjct: 258 QLLQHPFV-------------TVNSNKPIRELI 277

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 55.2 bits (133), Expect = 2e-08
 Identities = 40/141 (28%), Positives = 70/141 (49%), Gaps = 15/141 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS--PL-YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+  P+ + APE +  +K+  K+
Sbjct: 131 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 186

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G      P   +L R   
Sbjct: 187 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGC----PPKVYELMRACW 242

Query: 128 RQNPVERITFKEF---FNHRF 145
           + NP +R +F E    F   F
Sbjct: 243 QWNPSDRPSFAEIHQAFETMF 263

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 56.2 bits (135), Expect = 2e-08
 Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 37/157 (23%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG I+ +LV G   
Sbjct: 162 LKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVI 221

Query: 87  FDGSNQL--------QL------FQNILTST-------ELRFPPGAIEELHPDCV----- 120
           F G++ +        QL      F N L  T         ++P  + EEL PD +     
Sbjct: 222 FQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSES 281

Query: 121 -----------DLCRCLLRQNPVERITFKEFFNHRFL 146
                      DL   +L  +P +RI+  E   H ++
Sbjct: 282 ERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 318

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 56.2 bits (135), Expect = 2e-08
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 3/81 (3%)

Query: 43  LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILT- 101
           LA +L G+P Y+APE++    Y    D WSVG ILF+++ G+PPF      +    ++  
Sbjct: 204 LAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINW 263

Query: 102 STELRFPPGAIEELHPDCVDL 122
              L  PP    +L P+ VDL
Sbjct: 264 ENTLHIPPQV--KLSPEAVDL 282

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 55.4 bits (133), Expect = 3e-08
 Identities = 47/145 (32%), Positives = 72/145 (49%), Gaps = 14/145 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S N V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 206 AARNILLSENNV---VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 262

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D C   
Sbjct: 263 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD-C--- 318

Query: 127 LRQNPVERITFKEFFNHRFLGELRQ 151
               P +R TF E   H  LG L Q
Sbjct: 319 WHGEPSQRPTFSELVEH--LGNLLQ 341

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 54.7 bits (131), Expect = 3e-08
 Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 10/127 (7%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    KI DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 132 NILVGDNLVC---KIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 188

Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L +LVT G+ P+ G    ++ + +     +  P G  E LH    +L +   +++P
Sbjct: 189 FGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLH----ELMKLCWKKDP 244

Query: 132 VERITFK 138
            ER TF+
Sbjct: 245 DERPTFE 251

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 55.0 bits (133), Expect = 3e-08
 Identities = 47/195 (24%), Positives = 67/195 (34%), Gaps = 79/195 (40%)

Query: 14  QNLLV-STNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL--------------YMAPEI 58
            N+LV        V+KIGD G AR          L  +PL              Y APE+
Sbjct: 137 ANILVMGEGPERGVVKIGDLGLAR----------LFNAPLKPLADLDPVVVTIWYRAPEL 186

Query: 59  IQNHKYDAKA-DLWSVGAILFQLVTGKPPFDG------------SNQL------------ 93
           +   ++  KA D+W++G I  +L+T +P F G             +QL            
Sbjct: 187 LLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTE 246

Query: 94  -------------QLFQNILTST----------ELRFPPGAIEELHPDCVDLCRCLLRQN 130
                         L ++  T T          E    P           DL R LL  +
Sbjct: 247 KDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPD------SQGFDLLRKLLEYD 300

Query: 131 PVERITFKEFFNHRF 145
           P +RIT +E   H +
Sbjct: 301 PTKRITAEEALEHPY 315

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 55.0 bits (132), Expect = 3e-08
 Identities = 48/168 (28%), Positives = 72/168 (42%), Gaps = 30/168 (17%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEII-QNHKYDAKADLW 71
           QNLL+  NE    LK+ DFG AR+ + P         +  Y  P+I+  +  Y  + D+W
Sbjct: 133 QNLLI--NERGE-LKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMW 189

Query: 72  SVGAILFQLVTGKPPFDGSN---QLQLFQNIL-TSTELRFP-----------------PG 110
            VG I +++ TG+P F GS    QL     IL T TE  +P                   
Sbjct: 190 GVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRAD 249

Query: 111 AIEELHP----DCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVH 154
            +    P    D  +L   LL+    +RI+ +E   H +   L + +H
Sbjct: 250 CLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGERIH 297

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 54.6 bits (131), Expect = 5e-08
 Identities = 54/199 (27%), Positives = 84/199 (42%), Gaps = 33/199 (16%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ + V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 161 AARNVLVTEDNV---MKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 217

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 218 DVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTHELYM----IMRECW 273

Query: 128 RQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHP 187
              P +R TFK+                E    V       E L+ S P +++S     P
Sbjct: 274 HAVPSQRPTFKQL--------------VEDLDRVLTVTSTDEYLDLSVPFEQYS-----P 314

Query: 188 TNSSSKNPKSACSSACDKV 206
               S    S+CSS  D V
Sbjct: 315 GCPDS---PSSCSSGDDSV 330

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 55.0 bits (132), Expect = 5e-08
 Identities = 45/162 (27%), Positives = 76/162 (46%), Gaps = 27/162 (16%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEI-IQNHKYDAKADLWS 72
           QNLL+  N  T  LK+ DFG A++L     + +   S  Y APE+ +    Y    DLWS
Sbjct: 199 QNLLIDPN--THTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWS 256

Query: 73  VGAILFQLVTGKPPFDGSNQ----LQLFQNILTSTE------------LRFP---PGAIE 113
           +G I+ +++ G P F G +     +++ Q + T TE            ++FP   P  ++
Sbjct: 257 LGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLK 316

Query: 114 ELHP-----DCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
           ++ P     D ++     L+  P++R+   E     F  +LR
Sbjct: 317 KVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLR 358

Length = 440

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 53.9 bits (130), Expect = 5e-08
 Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 22/147 (14%)

Query: 1   MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCG-SPL-YMAPE 57
           M YV   ++A   +N+LV++N V    K+ DFG +R L   +    T  G  P+ + APE
Sbjct: 125 MNYVHRDLAA---RNILVNSNLVC---KVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPE 178

Query: 58  IIQNHKYDAKADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTELRFP---PGAI 112
            I   K+ + +D+WS G +++++++   +P +D SNQ  + + +     L  P   P A+
Sbjct: 179 AIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ-DVIKAVEDGYRLPPPMDCPSAL 237

Query: 113 EELHPDCVDLCRCLLRQNPVERITFKE 139
            +L  DC        +++  ER TF +
Sbjct: 238 YQLMLDC-------WQKDRNERPTFSQ 257

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 54.2 bits (130), Expect = 7e-08
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ + V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 161 AARNVLVTEDNV---MKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQS 217

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+     L R   
Sbjct: 218 DVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCTHELYM----LMRECW 273

Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 274 HAVPTQRPTFKQL 286

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 53.3 bits (128), Expect = 7e-08
 Identities = 42/127 (33%), Positives = 64/127 (50%), Gaps = 10/127 (7%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    T   KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 132 NILVSE---TLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 188

Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+    +L R   ++ P
Sbjct: 189 FGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELY----ELMRLCWKEKP 244

Query: 132 VERITFK 138
            ER TF+
Sbjct: 245 EERPTFE 251

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 53.9 bits (129), Expect = 9e-08
 Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 11/133 (8%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ N V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 164 AARNVLVTENNV---MKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 220

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+    D    + 
Sbjct: 221 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAI- 279

Query: 128 RQNPVERITFKEF 140
              P  R TFK+ 
Sbjct: 280 ---PSHRPTFKQL 289

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 53.9 bits (129), Expect = 9e-08
 Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)

Query: 41  QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           + LA +  G+P Y+APE+     Y+   D WS+G I+++++ G PPF      + ++ ++
Sbjct: 190 RQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVM 249

Query: 101 TSTE-LRFPP 109
              E L FPP
Sbjct: 250 NWKETLIFPP 259

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 53.9 bits (129), Expect = 9e-08
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 3/108 (2%)

Query: 41  QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           + LA +  G+P Y+APE+     Y+   D WS+G I+++++ G PPF      + ++ ++
Sbjct: 190 RQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVM 249

Query: 101 TSTE-LRFPPGA-IEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
              E L FPP   I E   D + L  C   +N +     +E  +H F 
Sbjct: 250 NWKETLVFPPEVPISEKAKDLI-LRFCTDSENRIGSNGVEEIKSHPFF 296

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 53.1 bits (127), Expect = 1e-07
 Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 10/127 (7%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV    V    KI DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 132 NILVGDGLVC---KIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 188

Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L +LVT G+ P+ G N  ++ + +     +  P      LH    +L     +++P
Sbjct: 189 FGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLH----ELMLQCWKKDP 244

Query: 132 VERITFK 138
            ER TF+
Sbjct: 245 EERPTFE 251

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 53.9 bits (129), Expect = 1e-07
 Identities = 48/148 (32%), Positives = 74/148 (50%), Gaps = 20/148 (13%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S N V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 201 AARNILLSENNV---VKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQS 257

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F Q +   T +R P  A  E++       R +
Sbjct: 258 DVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIY-------RIM 310

Query: 127 L---RQNPVERITFKEFFNHRFLGELRQ 151
           L   + +P ER TF        LG+L Q
Sbjct: 311 LACWQGDPKERPTFSALV--EILGDLLQ 336

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 53.9 bits (129), Expect = 1e-07
 Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 20/167 (11%)

Query: 27  LKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHK----YDAKADLWSVGAILFQL 80
           LK+ DFG    +    +   DT  G+P Y++PE++++      Y  + D WSVG  LF++
Sbjct: 181 LKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 240

Query: 81  VTGKPPFDGSNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCL------LRQNPVE 133
           + G  PF   + +  +  I+     L FP       H   + +C  L      L +N VE
Sbjct: 241 LVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNL-ICAFLTDREVRLGRNGVE 299

Query: 134 RITFKEFFNHRFLG--ELRQTVHAEQHSVVPETKPMVELLNSSTPED 178
            I    FF +       +R+T       VVPE    ++  N    ED
Sbjct: 300 EIKQHPFFKNDQWNWDNIRETA----APVVPELSSDIDSSNFDDIED 342

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 52.7 bits (126), Expect = 2e-07
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 6/67 (8%)

Query: 27  LKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVGAILFQL 80
           +K+ DFG +  LT   L  +T  G+P +MAPE+I      ++ YDA+ D+WS+G    +L
Sbjct: 167 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIEL 226

Query: 81  VTGKPPF 87
             G PP 
Sbjct: 227 GDGDPPL 233

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 52.7 bits (126), Expect = 2e-07
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ + V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 167 AARNVLVTEDNV---MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 223

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T G  P+ G    +LF+ +     +  P     EL+    D    + 
Sbjct: 224 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAV- 282

Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 283 ---PSQRPTFKQL 292

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 52.4 bits (126), Expect = 2e-07
 Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 9/83 (10%)

Query: 12  ACQNLLVST-NEVTPVLKIGDFGFARSLTPQDLADTLCGS--PL-YMAPEIIQNHKYDAK 67
           A +N+LV T   V    KI DFG A+ L   +      G   P+ +MA E I +  Y  K
Sbjct: 136 AARNVLVKTPQHV----KITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHK 191

Query: 68  ADLWSVGAILFQLVT-GKPPFDG 89
           +D+WS G  +++L+T G  P++G
Sbjct: 192 SDVWSYGVTVWELMTFGAKPYEG 214

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 51.1 bits (122), Expect = 4e-07
 Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 9/114 (7%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFAR-SLTPQDLADTLCGSPL-YMAPEIIQNHKYDAKAD 69
           A +N LV  N+V   +K+ DFG  R  L  Q  + T    P+ + +PE+    KY +K+D
Sbjct: 127 AARNCLVGENQV---VKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSD 183

Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTEL---RFPPGAIEELHPDC 119
           +WS G +++++ + GK P++  +  ++ + I     L   R    ++ EL   C
Sbjct: 184 VWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHC 237

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 51.8 bits (124), Expect = 4e-07
 Identities = 45/155 (29%), Positives = 63/155 (40%), Gaps = 37/155 (23%)

Query: 27  LKIGDFGFARSLTPQDLADT-LCG---SPLYMAPEIIQN-HKYDAKADLWSVGAILFQLV 81
           LKI DFG AR       AD  + G   +  Y APE+I N   Y+   D+WSVG I+ +++
Sbjct: 156 LKILDFGLARH------ADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEML 209

Query: 82  TGKPPFDGSNQLQLFQNILTSTEL----------------------RFPPGAIEELHPDC 119
           TGK  F G + L     IL  T +                      ++P      L P  
Sbjct: 210 TGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKA 269

Query: 120 ----VDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
               VDL   +L  +  +R+T  E   H +    R
Sbjct: 270 SPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR 304

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 51.4 bits (123), Expect = 4e-07
 Identities = 38/121 (31%), Positives = 67/121 (55%), Gaps = 21/121 (17%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+LV++N V    K+ DFG +R L   P+    T  G  P+ + APE I   K+ + 
Sbjct: 133 AARNILVNSNLVC---KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA 189

Query: 68  ADLWSVGAILFQLVT-GKPPF-DGSNQLQLFQNILTSTE--LRFP-----PGAIEELHPD 118
           +D+WS G +++++++ G+ P+ + SN     Q+++ + E   R P     P A+ +L  D
Sbjct: 190 SDVWSYGIVMWEVMSYGERPYWEMSN-----QDVIKAIEEGYRLPAPMDCPAALHQLMLD 244

Query: 119 C 119
           C
Sbjct: 245 C 245

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 51.9 bits (124), Expect = 5e-07
 Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 23/170 (13%)

Query: 27  LKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHK----YDAKADLWSVGAILFQL 80
           LK+ DFG    +  + +   DT  G+P Y++PE++++      Y  + D WSVG  L+++
Sbjct: 181 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 240

Query: 81  VTGKPPFDGSNQLQLFQNILT-STELRFPPGAIEELHPDCVDL-CRCL------LRQNPV 132
           + G  PF   + +  +  I+     L FP     ++  +  +L C  L      L +N V
Sbjct: 241 LVGDTPFYADSLVGTYSKIMNHKNSLTFPDDN--DISKEAKNLICAFLTDREVRLGRNGV 298

Query: 133 ERITFKEFF-NHRFLGE-LRQTVHAEQHSVVPETKPMVELLN-SSTPEDR 179
           E I    FF N ++  E LR TV      VVP+    ++  N     ED+
Sbjct: 299 EEIKRHLFFKNDQWAWETLRDTV----APVVPDLSSDIDTSNFDDIEEDK 344

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 51.2 bits (122), Expect = 5e-07
 Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 10/127 (7%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 132 NILVGENLVC---KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 188

Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L +L T G+ P+ G    ++   +     +  PP   E LH     +C+C  R+ P
Sbjct: 189 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHD---LMCQC-WRKEP 244

Query: 132 VERITFK 138
            ER TF+
Sbjct: 245 EERPTFE 251

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 51.2 bits (122), Expect = 5e-07
 Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 14/134 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+LV  N V    KI DFG +R    Q++    T+   P+ +MA E +    Y   +
Sbjct: 151 AARNILVGENYVA---KIADFGLSRG---QEVYVKKTMGRLPVRWMAIESLNYSVYTTNS 204

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++V+ G  P+ G    +L++ +     L  P    +E++    DL R   
Sbjct: 205 DVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVY----DLMRQCW 260

Query: 128 RQNPVERITFKEFF 141
           R+ P ER +F +  
Sbjct: 261 REKPYERPSFAQIL 274

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 51.2 bits (123), Expect = 5e-07
 Identities = 34/101 (33%), Positives = 45/101 (44%), Gaps = 8/101 (7%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-YMAPEII-QNHKYDAKADLWS 72
           NLL++       LKI DFG AR+        T     L Y APE++     Y    D+W+
Sbjct: 138 NLLLTD---KGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWA 194

Query: 73  VGAILFQLVTGKPPFDGS---NQLQLFQNILTSTELRFPPG 110
           VG IL +L+  KP   G     QL L   +L +      PG
Sbjct: 195 VGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPG 235

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 50.8 bits (121), Expect = 6e-07
 Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 14/129 (10%)

Query: 27  LKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVGAILFQL 80
           +K+ DFG +  LT   L  +T  G+P +MAPE+I      +  YDA+ D+WS+G    +L
Sbjct: 163 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIEL 222

Query: 81  VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEE---LHPDCVDLCRCLLRQNPVERITF 137
             G PP    + ++    I      R PP  + +      +  D  R  L ++  +R T 
Sbjct: 223 GDGDPPLADLHPMRALFKI-----PRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTV 277

Query: 138 KEFFNHRFL 146
            +   H F+
Sbjct: 278 SDLLQHVFI 286

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 51.0 bits (122), Expect = 7e-07
 Identities = 46/161 (28%), Positives = 67/161 (41%), Gaps = 21/161 (13%)

Query: 15  NLLV-STNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQ---NH-KYDAKA 68
           NLL+ S   V    KI DFG +R L    D  ++  G+  YM+PE I    NH  YD  A
Sbjct: 198 NLLINSAKNV----KIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYA 253

Query: 69  -DLWSVGAILFQLVTGKPPFDGSNQ---LQLFQNILTSTELRFPPGAIEELHPDCVDLCR 124
            D+WS+G  + +   G+ PF    Q     L   I  S     PP A      +      
Sbjct: 254 GDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQ----PPEAPATASREFRHFIS 309

Query: 125 CLLRQNPVERITFKEFFNHRFL---GELRQTVHAEQHSVVP 162
           C L++ P +R +  +   H F+      +       H ++P
Sbjct: 310 CCLQREPAKRWSAMQLLQHPFILRAQPGQGQGGPNLHQLLP 350

Length = 353

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 50.2 bits (120), Expect = 8e-07
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 8/101 (7%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LVS+   T V+K+ DFG  R +   D   +  G+     +  PE+    KY +K+
Sbjct: 127 AARNCLVSS---TGVVKVSDFGMTRYVL-DDEYTSSSGAKFPVKWSPPEVFNFSKYSSKS 182

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP 108
           D+WS G +++++ T GK PF+  +  ++ + I     L  P
Sbjct: 183 DVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRP 223

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 50.8 bits (121), Expect = 8e-07
 Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 45/178 (25%)

Query: 27  LKIGDFGFARSLTPQDLADTLCG---SPLYMAPEIIQN-HKYDAKADLWSVGAILFQLVT 82
           LKI DFG AR        D + G   +  Y APEI+ N   Y+   D+WSVG I+ +L+T
Sbjct: 159 LKILDFGLARHT-----DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 213

Query: 83  GKPPFDGS---NQLQLFQNI-----------LTSTELR--------FPPGAIEEL----H 116
           G+  F G+   +QL+L   +           ++S   R         P      +    +
Sbjct: 214 GRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN 273

Query: 117 PDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSS 174
           P  VDL   +L  +  +RIT  +   H +         A+ H   P+ +P+ +  + S
Sbjct: 274 PLAVDLLEKMLVLDSDKRITAAQALAHAYF--------AQYHD--PDDEPVADPYDQS 321

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 50.9 bits (122), Expect = 9e-07
 Identities = 33/83 (39%), Positives = 44/83 (53%), Gaps = 9/83 (10%)

Query: 27  LKIGDFGFARSL---TPQDLADT-LCGSPLYMAPEIIQNH--KYDAKADLWSVGAILFQL 80
           LKI DFG AR     TP  +  T    +  Y APE+  +   KY    D+WS+G I  ++
Sbjct: 142 LKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEV 201

Query: 81  VTGKPPFDGSN---QLQLFQNIL 100
           +TGKP F G N   QL L  ++L
Sbjct: 202 LTGKPLFPGKNVVHQLDLITDLL 224

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 50.9 bits (122), Expect = 9e-07
 Identities = 42/162 (25%), Positives = 64/162 (39%), Gaps = 50/162 (30%)

Query: 26  VLKIGDFGFAR------SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ 79
            LKI DFG AR       +TP  +      +  Y APE+I    Y    D+WSVG I+ +
Sbjct: 156 TLKILDFGLARTAGTSFMMTPYVV------TRYYRAPEVILGMGYKENVDIWSVGCIMGE 209

Query: 80  LVTGKPPFDGSNQL--------QL------FQNILTST-------ELRFPPGAIEELHPD 118
           ++ G   F G++ +        QL      F + L  T         ++   + EEL PD
Sbjct: 210 MIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPD 269

Query: 119 CV-----------------DLCRCLLRQNPVERITFKEFFNH 143
            +                 DL   +L  +P +RI+  +   H
Sbjct: 270 VLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 50.0 bits (119), Expect = 1e-06
 Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 13/136 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL----YMAPEIIQNHKYDAK 67
           A +N +V+ +     +KIGDFG  R +   D      G  L    +MAPE +++  +   
Sbjct: 146 AARNCMVAHDFT---VKIGDFGMTRDIYETDYYRK-GGKGLLPVRWMAPESLKDGVFTTS 201

Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           +D+WS G +L+++ +  + P+ G +  Q+ + ++    L  P    E +     DL R  
Sbjct: 202 SDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERVT----DLMRMC 257

Query: 127 LRQNPVERITFKEFFN 142
            + NP  R TF E  N
Sbjct: 258 WQFNPKMRPTFLEIVN 273

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 50.1 bits (119), Expect = 2e-06
 Identities = 32/129 (24%), Positives = 63/129 (48%), Gaps = 9/129 (6%)

Query: 27  LKIGDFGFARSLTPQDLADT--LCGSPLYMAPEIIQ-----NHKYDAKADLWSVGAILFQ 79
           +++ DFG    L       +    G+P Y++PEI+Q       KY  + D WS+G  +++
Sbjct: 141 IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYE 200

Query: 80  LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL--RQNPVERITF 137
           ++ G+ PF   + ++ +  I+   E    P  + ++  D  DL R L+  R++ + +   
Sbjct: 201 MLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGI 260

Query: 138 KEFFNHRFL 146
           ++F  H F 
Sbjct: 261 EDFKQHPFF 269

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 49.8 bits (119), Expect = 2e-06
 Identities = 43/166 (25%), Positives = 64/166 (38%), Gaps = 39/166 (23%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD------TLCGSPLYMAPEII-QNHKYD 65
           C N+L++       +K+ DFG AR    ++         TL     Y  PE++    +Y 
Sbjct: 144 CSNILLNNKGQ---IKLADFGLARLYNSEESRPYTNKVITL----WYRPPELLLGEERYG 196

Query: 66  AKADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNILTSTELRFPPGAI---------- 112
              D+WS G IL +L T KP F  +    QL+L   +  S      P  I          
Sbjct: 197 PAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKP 256

Query: 113 ---------EELH---PDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
                    EE        +DL   +L  +P +R T +E  N  +L
Sbjct: 257 KKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL 302

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+L+ T       KI DFG +++L   +    A T    P+ + APE +  +K+ +K
Sbjct: 122 AARNVLLVTQHYA---KISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSK 178

Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLC 123
           +D+WS G ++++  + G+ P+ G    ++ Q I +   +  P     E++ D + LC
Sbjct: 179 SDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMY-DLMKLC 234

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 49.3 bits (118), Expect = 2e-06
 Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 8/125 (6%)

Query: 27  LKIGDFGFARSLTPQDLADTL-CGSPLYMAPEII---QNHKYDAKADLWSVGAILFQLVT 82
           +K+ DFG +  L    +A T   G   YMAPE I       YD ++D+WS+G  L+++ T
Sbjct: 147 IKLCDFGISGQLV-DSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVAT 205

Query: 83  GKPPFDGSNQL--QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF 140
           GK P+   N +  QL Q ++             E  P  V+     L ++  +R  +KE 
Sbjct: 206 GKFPYPKWNSVFDQLTQ-VVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKEL 264

Query: 141 FNHRF 145
             H F
Sbjct: 265 LEHPF 269

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 49.3 bits (117), Expect = 2e-06
 Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 9/80 (11%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQ-----NHKYDAK 67
           QN+L++ N     +K+ DFG +  L       +T  G+P +MAPE+I      +  YD K
Sbjct: 140 QNVLLTEN---AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFK 196

Query: 68  ADLWSVGAILFQLVTGKPPF 87
           +DLWS+G    ++  G PP 
Sbjct: 197 SDLWSLGITAIEMAEGAPPL 216

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 8/118 (6%)

Query: 26  VLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLVT 82
           V+KIGDFG +R +   D       + L   +M PE I   K+  ++D+WS G +L+++ T
Sbjct: 160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFT 219

Query: 83  -GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            GK P+   +  +  + I    EL  P     E++     + +   ++ P +R+  K+
Sbjct: 220 YGKQPWYQLSNTEAIECITQGRELERPRTCPPEVY----AIMQGCWQREPQQRMVIKD 273

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 10/130 (7%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-YMAPEIIQNHKYDAKADL 70
           A +N+LV  N  +   KI DFG +R      +  T+   P+ +MA E +    Y  K+D+
Sbjct: 146 AARNVLVGENLAS---KIADFGLSRG-EEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDV 201

Query: 71  WSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           WS G +L+++V+ G  P+ G    +L++ +     +  P    +E++    +L R   R 
Sbjct: 202 WSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEKPRNCDDEVY----ELMRQCWRD 257

Query: 130 NPVERITFKE 139
            P ER  F +
Sbjct: 258 RPYERPPFAQ 267

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 49.1 bits (117), Expect = 2e-06
 Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 25/124 (20%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-------YMAPEIIQNHKY 64
           A +N+LV++N V    K+ DFG +R L   D +D    S L       + APE I   K+
Sbjct: 133 AARNILVNSNLVC---KVSDFGLSRFLE-DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKF 188

Query: 65  DAKADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEEL 115
            + +D+WS G +++++++   +P +D SN     Q+++ + E   R P     P A+ +L
Sbjct: 189 TSASDVWSYGIVMWEVMSYGERPYWDMSN-----QDVINAIEQDYRLPPPMDCPTALHQL 243

Query: 116 HPDC 119
             DC
Sbjct: 244 MLDC 247

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 46/174 (26%), Positives = 79/174 (45%), Gaps = 30/174 (17%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEII-QNHKYDAKADLW 71
           QNLL+  NE    LK+ DFG AR+ + P         +  Y  P+++  + +Y  + D+W
Sbjct: 133 QNLLI--NERGE-LKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMW 189

Query: 72  SVGAILFQLVTGKPPFDGS---NQLQLFQNIL-TSTELRFPP-GAIEE------------ 114
            VG I F++ +G+P F GS   ++L L   +L T TE  +P   + +E            
Sbjct: 190 GVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQ 249

Query: 115 --------LHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSV 160
                   L  + ++L    L+    +RI+ +E   H +   L   +H+   S+
Sbjct: 250 PLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLGTRIHSLPESI 303

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 48.9 bits (116), Expect = 2e-06
 Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 10/130 (7%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-YMAPEIIQNHKYDAKADL 70
           A +N+LV  N V    KI DFG +R      +  T+   P+ +MA E +    Y   +D+
Sbjct: 139 AARNILVGENYVA---KIADFGLSRG-QEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDV 194

Query: 71  WSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           WS G +L+++V+ G  P+ G    +L++ +     L  P    +E++    DL R   R+
Sbjct: 195 WSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVY----DLMRQCWRE 250

Query: 130 NPVERITFKE 139
            P ER +F +
Sbjct: 251 KPYERPSFAQ 260

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 48.8 bits (116), Expect = 3e-06
 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 6/111 (5%)

Query: 28  KIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPF 87
           ++ D G A  L          G+  YMAPEI++   Y    D +++G  ++++V G+ PF
Sbjct: 135 RLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPF 194

Query: 88  DGSNQLQLFQNILTST---ELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
               +    + +   T   E++F      E   +  D+CR  L + P +R+
Sbjct: 195 KDHKEKVAKEELKRRTLEDEVKFEHQNFTE---ESKDICRLFLAKKPEDRL 242

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 48.9 bits (116), Expect = 3e-06
 Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 9/101 (8%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEII-QNHKYDAKADLW 71
           QNLL+  NE    LK+ DFG AR+ + P         +  Y  P+++  + +Y    D+W
Sbjct: 132 QNLLI--NEKGE-LKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMW 188

Query: 72  SVGAILFQLVTGKPPFDGSN---QLQL-FQNILTSTELRFP 108
            VG IL+++ TG+P F GS    +L L F+ + T TE  +P
Sbjct: 189 GVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWP 229

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 49.3 bits (117), Expect = 3e-06
 Identities = 23/74 (31%), Positives = 38/74 (51%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG I+ +++ G   
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVL 224

Query: 87  FDGSNQLQLFQNIL 100
           F G++ +  +  ++
Sbjct: 225 FPGTDHIDQWNKVI 238

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 36/128 (28%), Positives = 54/128 (42%), Gaps = 26/128 (20%)

Query: 26  VLKIGDFGFARSLTPQDLADTLCGSP----------LYMAPEIIQNHKYDAKADLWSVGA 75
            +K+ DFG AR     D+ D    S            +MA E +Q  K+  K+D+WS G 
Sbjct: 136 TVKVADFGLAR-----DIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGV 190

Query: 76  ILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDCVDLCRCLLRQNP 131
           +L++L+T G PP+   +   +   +L    L  P   P  + E+   C           P
Sbjct: 191 LLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCWH-------PKP 243

Query: 132 VERITFKE 139
             R TF E
Sbjct: 244 EMRPTFSE 251

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 48.1 bits (115), Expect = 4e-06
 Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 17/136 (12%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP------LYMAPEIIQNHKYD 65
           A +N+L+++++    +KIGDFG  R+L   +  D             + APE ++   + 
Sbjct: 124 AARNILLASDDK---VKIGDFGLMRALPQNE--DHYVMEEHLKVPFAWCAPESLRTRTFS 178

Query: 66  AKADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLC 123
             +D+W  G  L+++ T G+ P+ G +  Q+ + I    E L  P    ++++    ++ 
Sbjct: 179 HASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIY----NVM 234

Query: 124 RCLLRQNPVERITFKE 139
                 NP +R TF  
Sbjct: 235 LQCWAHNPADRPTFAA 250

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 48.4 bits (115), Expect = 4e-06
 Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 25/155 (16%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+LV++      +K+ DFG AR  + Q     +  +  Y APE++    Y    D+WSV
Sbjct: 137 ENILVTSGGQ---VKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSV 193

Query: 74  GAILFQLVTGKPPFDG---SNQL-QLFQNILTSTELRFP--------------PGAIEEL 115
           G I  ++   KP F G   ++QL ++F  I    E  +P              P  ++ +
Sbjct: 194 GCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSV 253

Query: 116 HPDC----VDLCRCLLRQNPVERITFKEFFNHRFL 146
            P+       L   +L  NP +RI+      H F 
Sbjct: 254 VPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 48.5 bits (115), Expect = 4e-06
 Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 11/134 (8%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +KIGDFG +R +   D       + L   +M PE I   K+  ++
Sbjct: 150 ATRNCLVGANLL---VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 206

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G IL+++ T GK P+   +  ++ + I     L  P    +E++    D+     
Sbjct: 207 DVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVY----DIMLGCW 262

Query: 128 RQNPVERITFKEFF 141
           ++ P +R+  KE +
Sbjct: 263 QREPQQRLNIKEIY 276

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 48.1 bits (114), Expect = 4e-06
 Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 10/126 (7%)

Query: 27  LKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEII---QNHKYDAKADLWSVGAILFQLVT 82
           +K+ DFG A  +T       +  G+P +MAPE+    +N  Y+   D+W+VG    +L  
Sbjct: 145 VKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAE 204

Query: 83  GKPP-FDGSNQLQLFQNILTSTELRFPPGAIEELH--PDCVDLCRCLLRQNPVERITFKE 139
            +PP FD      LF   L S     PP   ++        +  +  L +NP +R T + 
Sbjct: 205 LQPPMFDLHPMRALF---LMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAER 261

Query: 140 FFNHRF 145
              H F
Sbjct: 262 LLTHLF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 48.1 bits (114), Expect = 4e-06
 Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 11/81 (13%)

Query: 14  QNLLVSTN-EVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQ-----NHKYDA 66
           QN+L++ N EV    K+ DFG +  L       +T  G+P +MAPE+I      +  YD 
Sbjct: 150 QNVLLTENAEV----KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDY 205

Query: 67  KADLWSVGAILFQLVTGKPPF 87
           ++D+WS+G    ++  G PP 
Sbjct: 206 RSDIWSLGITAIEMAEGAPPL 226

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 48.1 bits (115), Expect = 5e-06
 Identities = 38/107 (35%), Positives = 54/107 (50%), Gaps = 20/107 (18%)

Query: 14  QNLLVS-TNEVTPVLKIGDFGFAR-----SLTPQDLADTLCGSPLYMAPEII-QNHKYDA 66
           QNLL+S   E    LK+ DFG AR     S T  +   TL     Y  P+++  + +Y  
Sbjct: 132 QNLLISERGE----LKLADFGLARAKSVPSKTYSNEVVTL----WYRPPDVLLGSTEYST 183

Query: 67  KADLWSVGAILFQLVTGKPPFDGS----NQLQLFQNIL-TSTELRFP 108
             D+W VG I +++ TG+P F GS    +QL     +L T TE  +P
Sbjct: 184 SLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWP 230

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 47.5 bits (114), Expect = 6e-06
 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 10/99 (10%)

Query: 53  YMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTEL----RFP 108
           Y +PE I+ H YD   D W+VG + ++L+TGK PF            L    L    +  
Sbjct: 172 YFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDE-----DEELDLESLLKRQQKK 226

Query: 109 PGAIEELHPDCVDLCRCLLRQNPVER-ITFKEFFNHRFL 146
              I+ +  +  D  + +L+ N   R   + E   H FL
Sbjct: 227 LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFL 265

Length = 267

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 47.3 bits (112), Expect = 8e-06
 Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 10/126 (7%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    + + KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 133 NVLVSE---SLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 189

Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L+++VT GK P+ G +   +   +     +       +EL+    D+ +   ++  
Sbjct: 190 FGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELY----DIMKTCWKEKA 245

Query: 132 VERITF 137
            ER TF
Sbjct: 246 EERPTF 251

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 47.7 bits (113), Expect = 8e-06
 Identities = 32/130 (24%), Positives = 64/130 (49%), Gaps = 11/130 (8%)

Query: 27  LKIGDFGFARSLTPQDLADT--LCGSPLYMAPEIIQNH-----KYDAKADLWSVGAILFQ 79
           +++ DFG    +       +    G+P Y++PEI+Q       KY  + D WS+G  +++
Sbjct: 141 IRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 200

Query: 80  LVTGKPPFDGSNQLQLFQNILTSTELRFP-PGAIEELHPDCVDLCRCLL--RQNPVERIT 136
           ++ G+ PF   + ++ +  I+   E RF  P  I ++  +  DL + L+  R+  + +  
Sbjct: 201 MLYGETPFYAESLVETYGKIMNHEE-RFQFPSHITDVSEEAKDLIQRLICSRERRLGQNG 259

Query: 137 FKEFFNHRFL 146
            ++F  H F 
Sbjct: 260 IEDFKKHAFF 269

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 47.3 bits (112), Expect = 1e-05
 Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 13/117 (11%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+LV++N      K+ DFG +R L   P+    T  G  P+ + APE I   K+ + 
Sbjct: 134 AARNILVNSNLEC---KVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSA 190

Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           +D+WS G +++++++   +P +D SN  ++ + I     L  P   P A+ +L   C
Sbjct: 191 SDVWSFGIVMWEVMSFGERPYWDMSNH-EVMKAINDGFRLPAPMDCPSAVYQLMLQC 246

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 47.0 bits (111), Expect = 1e-05
 Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 10/115 (8%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +KIGDFG +R +   D       + L   +M PE I   K+  ++
Sbjct: 147 ATRNCLVGENLL---VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 203

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           D+WS+G +L+++ T GK P+   +  ++ + I     L+ P   P  + +L   C
Sbjct: 204 DVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPKEVYDLMLGC 258

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 25/78 (32%), Positives = 49/78 (62%), Gaps = 8/78 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-YMAPEIIQNHKYDAKADL 70
           A +N+LVS + V    K+ DFG AR +    + ++    P+ + APE +++ K+ +K+D+
Sbjct: 127 AARNILVSEDGVA---KVSDFGLAR-VGSMGVDNSKL--PVKWTAPEALKHKKFSSKSDV 180

Query: 71  WSVGAILFQLVT-GKPPF 87
           WS G +L+++ + G+ P+
Sbjct: 181 WSYGVLLWEVFSYGRAPY 198

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 46.7 bits (111), Expect = 1e-05
 Identities = 26/115 (22%), Positives = 58/115 (50%), Gaps = 8/115 (6%)

Query: 29  IGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLVT-GK 84
           + DFG ++ +   D       + +   ++A E + +  Y +K+D+W+ G  ++++ T G+
Sbjct: 154 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQ 213

Query: 85  PPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            P+ G    +++  +     L+ P   ++EL+ D +  C    R +P +R TF +
Sbjct: 214 TPYPGVENHEIYDYLRHGNRLKQPEDCLDELY-DLMYSC---WRADPKDRPTFTK 264

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 46.6 bits (110), Expect = 2e-05
 Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 10/121 (8%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLVT- 82
           +KIGDFG  R +   D         L   +M+PE +++  +   +D+WS G +L+++ T 
Sbjct: 158 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 217

Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCV-DLCRCLLRQNPVERITFKEFF 141
            + P+ G +  Q+ + ++    L  P        PD + +L R   + NP  R +F E  
Sbjct: 218 AEQPYQGMSNEQVLRFVMEGGLLDKPDNC-----PDMLFELMRMCWQYNPKMRPSFLEII 272

Query: 142 N 142
           +
Sbjct: 273 S 273

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 47.0 bits (111), Expect = 2e-05
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQLVTGKP 85
           L+I DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+ GK 
Sbjct: 157 LRILDFGLARQ--ADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKA 214

Query: 86  PFDGSNQLQLFQNIL 100
            F G++ +   + I+
Sbjct: 215 LFPGNDYIDQLKRIM 229

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 46.6 bits (111), Expect = 2e-05
 Identities = 38/147 (25%), Positives = 64/147 (43%), Gaps = 26/147 (17%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+LV + ++   +KI DFG A+ L              SP+ + APE ++  K+ + 
Sbjct: 136 AARNILVESEDL---VKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSA 192

Query: 68  ADLWSVGAILFQLVT-GKP-------------PFDGSNQLQLFQNILTSTE-LRFPPGAI 112
           +D+WS G  L++L T G P                G   +     +L   E L  PP   
Sbjct: 193 SDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCP 252

Query: 113 EELHPDCVDLCRCLLRQNPVERITFKE 139
           +E++    DL +      P +R +F +
Sbjct: 253 DEVY----DLMKLCWEAEPQDRPSFAD 275

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 47.0 bits (111), Expect = 2e-05
 Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 4/73 (5%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK-- 84
           +K+ DFG +  L    +A++  G+  YM+PE +Q   Y  ++D+WS+G  L +L  G+  
Sbjct: 143 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYP 201

Query: 85  -PPFDGSNQLQLF 96
            PP D      +F
Sbjct: 202 IPPPDAKELEAIF 214

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 46.5 bits (110), Expect = 2e-05
 Identities = 33/114 (28%), Positives = 59/114 (51%), Gaps = 12/114 (10%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           ++I D G A   + +    ++ G+  YMAPE++Q    YD+ AD +S+G +LF+L+ G  
Sbjct: 136 VRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 194

Query: 86  PFDG---SNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           PF      ++ ++ +  LT + EL   P       P+   L   LL+++   R+
Sbjct: 195 PFRQHKTKDKHEIDRMTLTMAVEL---PD---SFSPELRSLLEGLLQRDVNRRL 242

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 46.6 bits (111), Expect = 2e-05
 Identities = 41/148 (27%), Positives = 70/148 (47%), Gaps = 23/148 (15%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N     +KI DFG +R+L   D       +PL   +MA E +   K+  K+
Sbjct: 157 ATRNCLVGKNYT---IKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKS 213

Query: 69  DLWSVGAILFQLVT--GKPPFDGSNQLQLFQNIL-------TSTELRFPPGAIEELHPDC 119
           D+W+ G  L++++T   + P++     Q+ +N             L  PP   ++++   
Sbjct: 214 DVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIY--- 270

Query: 120 VDL-CRCLLRQNPVERITFKEFFNHRFL 146
            +L   C  R++  +R TF+E   H FL
Sbjct: 271 -ELMLEC-WRRDEEDRPTFREI--HLFL 294

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 46.7 bits (111), Expect = 2e-05
 Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 11/129 (8%)

Query: 27  LKIGDFGFARSLTPQDLADTLC--GSPLYMAPEIIQ-----NHKYDAKADLWSVGAILFQ 79
           +++ DFG    L       +    G+P Y++PEI+Q       +Y  + D WS+G  +++
Sbjct: 141 IRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYE 200

Query: 80  LVTGKPPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLL--RQNPVERIT 136
           ++ G+ PF   + ++ +  I+   E  +FPP  + ++  +  DL R L+   +  + R  
Sbjct: 201 MLYGETPFYAESLVETYGKIMNHKEHFQFPP-DVTDVSEEAKDLIRRLICSPETRLGRNG 259

Query: 137 FKEFFNHRF 145
            ++F +H F
Sbjct: 260 LQDFKDHPF 268

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 46.3 bits (110), Expect = 2e-05
 Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 20/136 (14%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L++  ++    KI DFG AR +   D    + G+   P+ +MAPE I N  Y  +
Sbjct: 168 AARNVLLTHGKIV---KICDFGLARDIM-NDSNYVVKGNARLPVKWMAPESIFNCVYTFE 223

Query: 68  ADLWSVGAILFQLVT-GKPPFDG----SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL 122
           +D+WS G +L+++ + G  P+ G    S   +L +      +    P  I ++   C D 
Sbjct: 224 SDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDA 283

Query: 123 CRCLLRQNPVERITFK 138
                  +P++R TFK
Sbjct: 284 -------DPLKRPTFK 292

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 46.4 bits (110), Expect = 2e-05
 Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 13/139 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N LV  N V   +KI DFG +R++   D   A      P+ +M PE I  ++Y  ++
Sbjct: 157 ATRNCLVGENMV---VKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTES 213

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ + G  P+ G    ++   +     L  P     EL+    +L R   
Sbjct: 214 DVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCPLELY----NLMRLCW 269

Query: 128 RQNPVERITFKEFFNHRFL 146
            + P +R +F     +R L
Sbjct: 270 SKLPSDRPSFASI--NRIL 286

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 46.1 bits (109), Expect = 2e-05
 Identities = 23/101 (22%), Positives = 54/101 (53%), Gaps = 7/101 (6%)

Query: 29  IGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLVT-GK 84
           + DFG ++ +   D     C S L   ++A E + ++ Y   +D+W+ G  +++++T G+
Sbjct: 154 VADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQ 213

Query: 85  PPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRC 125
            P+ G    +++  ++    L+ PP  +E+++     +C+C
Sbjct: 214 TPYAGVENSEIYNYLIKGNRLKQPPDCLEDVYE---LMCQC 251

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 20/137 (14%)

Query: 12  ACQN-LLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDA 66
           A +N LLV+ ++     KI DFG +R+L        A T    PL + APE I   K+ +
Sbjct: 122 AARNVLLVNRHQA----KISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSS 177

Query: 67  KADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHP---DCVDL 122
           K+D+WS G  L++  + G  P+      ++   + +   L  P    +E++     C   
Sbjct: 178 KSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSC--- 234

Query: 123 CRCLLRQNPVERITFKE 139
                +  P +R TF E
Sbjct: 235 ----WKYRPEDRPTFSE 247

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 46.2 bits (109), Expect = 3e-05
 Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 4/73 (5%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK-- 84
           +K+ DFG +  L    +A++  G+  YM+PE +Q   Y  ++D+WS+G  L ++  G+  
Sbjct: 143 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYP 201

Query: 85  -PPFDGSNQLQLF 96
            PP D      +F
Sbjct: 202 IPPPDAKELELMF 214

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 45.9 bits (109), Expect = 3e-05
 Identities = 36/139 (25%), Positives = 61/139 (43%), Gaps = 17/139 (12%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV        +KI DFG +R +   D       S L   +M PE I   K+  ++
Sbjct: 151 AARNCLVGEGLT---VKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTES 207

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDCVDLCR 124
           D+WS G +L+++ + G  P+ G +  ++ + I +   L  P   P  +  L  +C +   
Sbjct: 208 DIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWN--- 264

Query: 125 CLLRQNPVERITFKEFFNH 143
               + P  R  FK+    
Sbjct: 265 ----EIPARRPRFKDIHTR 279

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 45.8 bits (108), Expect = 3e-05
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG I+ ++V  K  
Sbjct: 158 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 217

Query: 87  FDGSNQLQLFQNILTSTELRFP-PGAIEELHP 117
           F G + +  +  ++   +L  P P  +++L P
Sbjct: 218 FPGRDYIDQWNKVI--EQLGTPCPEFMKKLQP 247

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 44.3 bits (105), Expect = 4e-05
 Identities = 23/102 (22%), Positives = 41/102 (40%), Gaps = 7/102 (6%)

Query: 51  PLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQL-QLFQNIL-----TSTE 104
           P +MAPE+IQ   Y  KAD++S+G  L++ +  + P++   +L  + + +L         
Sbjct: 68  PYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPR 127

Query: 105 LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
            R     +         +  C  R  P  R     +  H   
Sbjct: 128 DRSNLEGVSAARSFEDFMRLCASRL-PQRREAANHYLAHCRA 168

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 45.3 bits (107), Expect = 4e-05
 Identities = 30/133 (22%), Positives = 64/133 (48%), Gaps = 12/133 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV        +K+ DFG +R +   +   ++ GS     +  PE++   K+ +K+
Sbjct: 127 AARNCLVDDQGC---VKVSDFGLSRYVLDDEYTSSV-GSKFPVRWSPPEVLLYSKFSSKS 182

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +++++ + GK P++  N  +  + +     L  P  A E+++     +     
Sbjct: 183 DVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYA----IMYSCW 238

Query: 128 RQNPVERITFKEF 140
            +   ER TF++ 
Sbjct: 239 HEKAEERPTFQQL 251

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 45.1 bits (107), Expect = 4e-05
 Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 22/135 (16%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LVS + V    K+ DFG A+  +            L   + APE ++  K+  K+
Sbjct: 129 AARNVLVSEDLVA---KVSDFGLAKEAS-----QGQDSGKLPVKWTAPEALREKKFSTKS 180

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDCVDLCR 124
           D+WS G +L+++ + G+ P+       +  ++     +  P   P  + ++  DC +L  
Sbjct: 181 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDCWEL-- 238

Query: 125 CLLRQNPVERITFKE 139
                +P +R TFK+
Sbjct: 239 -----DPAKRPTFKQ 248

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 45.3 bits (107), Expect = 5e-05
 Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 4/55 (7%)

Query: 29  IGDFGFAR--SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           IGD G A+   + P  L   L G+    APE++   KY++KAD+WS G +LF+++
Sbjct: 198 IGDLGAAQFPVVAPAFLG--LAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML 250

Length = 357

>gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

 Score = 44.6 bits (105), Expect = 6e-05
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 8/100 (8%)

Query: 28  KIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAKADLWSVGAILFQLVT- 82
           KI DFG +++L   D    A +    PL + APE I   K+ +++D+WS G  +++  + 
Sbjct: 135 KISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSY 194

Query: 83  GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           G+ P+      ++   I     L  P   P  +  L  DC
Sbjct: 195 GQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDC 234

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 45.0 bits (106), Expect = 6e-05
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 7/82 (8%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L   +      G  +   +MA E I +  Y  ++
Sbjct: 136 AARNVLVKTPQH---VKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQS 192

Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 193 DVWSYGVTVWELMTFGSKPYDG 214

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 44.7 bits (106), Expect = 7e-05
 Identities = 39/164 (23%), Positives = 63/164 (38%), Gaps = 36/164 (21%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHK-YDAKA 68
           N+L++ + +   LK+ DFG AR+ +    +     +       Y  PE++   + Y    
Sbjct: 149 NILITKDGI---LKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPI 205

Query: 69  DLWSVGAILFQLVTGKPPFDGSN---QLQLFQNILTS---------------TELRFPPG 110
           D+W  G I+ ++ T  P   G+    QL L   +  S                ++  P G
Sbjct: 206 DMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQG 265

Query: 111 ----AIEELHP-----DCVDLCRCLLRQNPVERITFKEFFNHRF 145
                 E L P       +DL   LL  +P +RI      NH F
Sbjct: 266 QKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDF 309

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 44.9 bits (106), Expect = 7e-05
 Identities = 38/133 (28%), Positives = 66/133 (49%), Gaps = 12/133 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L++   +T   KI DFG AR +   D    + G+   P+ +MAPE I N  Y  +
Sbjct: 241 AARNILLTHGRIT---KICDFGLARDIR-NDSNYVVKGNARLPVKWMAPESIFNCVYTFE 296

Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           +D+WS G +L+++ + G  P+ G      F  ++        P   E    +  D+ +  
Sbjct: 297 SDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSP---ECAPSEMYDIMKSC 353

Query: 127 LRQNPVERITFKE 139
              +P++R TFK+
Sbjct: 354 WDADPLKRPTFKQ 366

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 44.4 bits (105), Expect = 8e-05
 Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 11/77 (14%)

Query: 12  ACQNLLV-STNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYD 65
           A +N+LV S N V    KIGDFG  + L PQD        P      + APE +   K+ 
Sbjct: 135 ATRNILVESENRV----KIGDFGLTKVL-PQDKEYYKVREPGESPIFWYAPESLTESKFS 189

Query: 66  AKADLWSVGAILFQLVT 82
             +D+WS G +L++L T
Sbjct: 190 VASDVWSFGVVLYELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 44.0 bits (104), Expect = 9e-05
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 7/109 (6%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQ--DLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N LV  N V   LKI DFG +R        ++D L   P+ + APE +   +Y +++
Sbjct: 120 AARNCLVGENNV---LKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSES 176

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELH 116
           D+WS G +L++  + G  P+ G +  Q  + I +   +  P    EE++
Sbjct: 177 DVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIY 225

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 44.2 bits (104), Expect = 9e-05
 Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)

Query: 28  KIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQLVTGKPP 86
           +I D G A   + +    ++ G+  YMAPE++Q    YD+ AD +S+G +LF+L+ G  P
Sbjct: 137 RISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSP 195

Query: 87  F 87
           F
Sbjct: 196 F 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 43.9 bits (103), Expect = 9e-05
 Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 10/127 (7%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    + V KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 132 NILVSA---SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 188

Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G +  ++ + +     +  P    EEL+     + RC  +  P
Sbjct: 189 FGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYN---IMMRC-WKNRP 244

Query: 132 VERITFK 138
            ER TF+
Sbjct: 245 EERPTFE 251

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 44.1 bits (104), Expect = 1e-04
 Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 26/148 (17%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAK 67
           A +N+LV   E    +KIGDFG  +++        + D L     + APE +   K+   
Sbjct: 136 AARNVLV---ESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIA 192

Query: 68  ADLWSVGAILFQLVT-----GKP---------PFDGSNQLQLFQNILTSTE-LRFPPGAI 112
           +D+WS G  L++L+T       P         P  G   +     +L   + L  PP   
Sbjct: 193 SDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCP 252

Query: 113 EELHPDCVDLCRCLLRQNPVERITFKEF 140
           EE++     L R      P +R TF+  
Sbjct: 253 EEVY----QLMRKCWEFQPSKRTTFQNL 276

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 43.9 bits (103), Expect = 1e-04
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)

Query: 12  ACQNLLV-STNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAK 67
           A +N+LV S N V    KI DFG AR L   +      G  +   +MA E I   K+  +
Sbjct: 136 AARNVLVKSPNHV----KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 191

Query: 68  ADLWSVGAILFQLVT-GKPPFDG 89
           +D+WS G  +++L+T G  P+DG
Sbjct: 192 SDVWSYGVTIWELMTFGGKPYDG 214

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 43.8 bits (103), Expect = 1e-04
 Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 33/163 (20%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNH-KYDAKADLW 71
           QNLL+S       LK+ DFG AR+ + P     +   +  Y  P+++     Y +  D+W
Sbjct: 132 QNLLISY---LGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIW 188

Query: 72  SVGAILFQLVTGKPPFDG-SNQLQLFQNILT----STELR--------------FPPGAI 112
             G I  +++ G+P F G S+  +  + I T     TE                F P   
Sbjct: 189 GAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKP 248

Query: 113 EELH---------PDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           ++L          P   DL   +L   P +RI+ ++   H + 
Sbjct: 249 QQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 15/139 (10%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLAD--TLCGSPLYMAPEIIQNHK---YDAKAD 69
           N+L++ N     +K+ DFG +  +T   +A   +  G+P +MAPE+    +   Y+   D
Sbjct: 136 NILLTDNGH---VKLADFGVSAQITAT-IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCD 191

Query: 70  LWSVGAILFQLVTGKPP-FDGSNQLQLFQNILTSTELRFPPGAIEELH--PDCVDLCRCL 126
           +W+VG    +L   +PP FD      LF  ++T +  + PP   +++          +  
Sbjct: 192 IWAVGITAIELAELQPPMFDLHPMRALF--LMTKSNFQ-PPKLKDKMKWSNSFHHFVKMA 248

Query: 127 LRQNPVERITFKEFFNHRF 145
           L +NP +R T ++   H F
Sbjct: 249 LTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 42.5 bits (100), Expect = 2e-04
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 20/101 (19%)

Query: 42  DLADTLCG---SPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQ- 97
           ++ D+  G     +Y APE+    +     D WS+GAILF+L+TGK          L + 
Sbjct: 134 EVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGK---------TLVEC 184

Query: 98  ---NILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
               I T T L  P    E +  +   L + LL+ NP ER+
Sbjct: 185 HPSGINTHTTLNIP----EWVSEEARSLLQQLLQFNPTERL 221

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 42.8 bits (101), Expect = 2e-04
 Identities = 33/118 (27%), Positives = 57/118 (48%), Gaps = 10/118 (8%)

Query: 27  LKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAKADLWSVGAILFQLVT 82
           +KI D   +R L P D   L D     P+ +MA E + N +Y + +D+WS G +L++L+T
Sbjct: 156 VKITDNALSRDLFPMDYHCLGDNE-NRPVKWMALESLVNKEYSSASDVWSFGVLLWELMT 214

Query: 83  -GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            G+ P+   +  ++   +     L  P    +EL      +  C    +P ER +F +
Sbjct: 215 LGQTPYVEIDPFEMAAYLKDGYRLAQPINCPDELF----AVMACCWALDPEERPSFSQ 268

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 42.9 bits (101), Expect = 3e-04
 Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 9/83 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L++   V    KI DFG AR +   D    + G+   P+ +MAPE I +  Y  +
Sbjct: 239 AARNVLLTDGRVA---KICDFGLARDIM-NDSNYVVKGNARLPVKWMAPESIFDCVYTVQ 294

Query: 68  ADLWSVGAILFQLVT-GKPPFDG 89
           +D+WS G +L+++ + GK P+ G
Sbjct: 295 SDVWSYGILLWEIFSLGKSPYPG 317

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 42.4 bits (100), Expect = 4e-04
 Identities = 27/81 (33%), Positives = 46/81 (56%), Gaps = 6/81 (7%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-PL-YMAPEIIQNHKYDAKAD 69
           A +N+LVS+ +    +K+GDFG +R L  +       G  P+ +MAPE I   ++ + +D
Sbjct: 134 AARNVLVSSPDC---VKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASD 190

Query: 70  LWSVGAILFQ-LVTGKPPFDG 89
           +W  G  +++ L+ G  PF G
Sbjct: 191 VWMFGVCMWEILMLGVKPFQG 211

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 41.9 bits (98), Expect = 5e-04
 Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 10/79 (12%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPL-YMAPEIIQNHKYDAKAD 69
           A +N+LVS + V    K+ DFG  +  +  QD        P+ + APE ++  K+  K+D
Sbjct: 129 AARNVLVSEDNVA---KVSDFGLTKEASSTQDTGKL----PVKWTAPEALREKKFSTKSD 181

Query: 70  LWSVGAILFQLVT-GKPPF 87
           +WS G +L+++ + G+ P+
Sbjct: 182 VWSFGILLWEIYSFGRVPY 200

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 41.9 bits (98), Expect = 5e-04
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 9/83 (10%)

Query: 12  ACQNLLV-STNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAK 67
           A +N+LV S N V    KI DFG AR L   +      G  +   +MA E I + ++  +
Sbjct: 136 AARNVLVKSPNHV----KITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQ 191

Query: 68  ADLWSVGAILFQLVT-GKPPFDG 89
           +D+WS G  +++L+T G  P+DG
Sbjct: 192 SDVWSYGVTVWELMTFGAKPYDG 214

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 42.0 bits (98), Expect = 5e-04
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 5/66 (7%)

Query: 27  LKIGDFGFAR----SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLWSVGAILFQLV 81
           +KI D GFAR     L P    D +  +  Y APE++   ++  KA D+W++G I  +L+
Sbjct: 151 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 210

Query: 82  TGKPPF 87
           T +P F
Sbjct: 211 TSEPIF 216

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 41.7 bits (98), Expect = 6e-04
 Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 7/92 (7%)

Query: 51  PL-YMAPEIIQNHKYDAKADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILT-STELRF 107
           PL ++APE +Q   +  K+D+WS G +++++ T G+ PF G +  ++   +     EL  
Sbjct: 181 PLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPV 240

Query: 108 PPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
           P G    L+     + RC    NP +R +F E
Sbjct: 241 PEGCPSRLYK---LMTRCWA-VNPKDRPSFSE 268

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 42.0 bits (98), Expect = 6e-04
 Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 5/66 (7%)

Query: 27  LKIGDFGFAR----SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLWSVGAILFQLV 81
           +KI D GFAR     L P    D +  +  Y APE++   ++  KA D+W++G I  +L+
Sbjct: 151 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 210

Query: 82  TGKPPF 87
           T +P F
Sbjct: 211 TSEPIF 216

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 40.7 bits (95), Expect = 0.001
 Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 26/139 (18%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCG-SP-LYMAPEIIQNHKYDAKAD 69
           A   +LV+++ V    KI  F   +    + +  T+ G SP L+ APE IQ H + + +D
Sbjct: 134 AAHKVLVNSDLVC---KISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASD 190

Query: 70  LWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFPPGA-----IEELHPDCV 120
           +WS G +++++++   +P +D S      Q+++ + E   R P        + +L  DC 
Sbjct: 191 VWSFGIVMWEVMSYGERPYWDMSG-----QDVIKAVEDGFRLPAPRNCPNLLHQLMLDC- 244

Query: 121 DLCRCLLRQNPVERITFKE 139
                  ++   ER  F +
Sbjct: 245 ------WQKERGERPRFSQ 257

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEII-QNHKYDAKADLW 71
           QNLL+S    T  LK+ DFG AR+ + P         +  Y  P+++  + +Y    D+W
Sbjct: 132 QNLLISD---TGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMW 188

Query: 72  SVGAILFQLVTGKPPFDGSNQLQ 94
            VG I  +++ G   F G   +Q
Sbjct: 189 GVGCIFVEMIQGVAAFPGMKDIQ 211

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 18/122 (14%)

Query: 29  IGDFGFARSLTPQDL--ADTLCGSPL-YMAPEIIQNHKYDAKADLWSVGAILFQLVT-GK 84
           + DFG ++ +   D      +   P+ ++A E + +  Y  K+D+WS G  ++++ T G+
Sbjct: 153 VADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQ 212

Query: 85  PPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVD-----LCRCLLRQNPVERITFKE 139
            P+ G    +++  +     L+ P        PDC+D     +  C L  NP +R +F+ 
Sbjct: 213 TPYPGVENSEIYDYLRQGNRLKQP--------PDCLDGLYSLMSSCWL-LNPKDRPSFET 263

Query: 140 FF 141
             
Sbjct: 264 LR 265

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 40.0 bits (93), Expect = 0.002
 Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 18/135 (13%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL------YMAPEIIQNHKYD 65
           A +N LV  N V   LKI DFG +R    Q+       S L      + APE +   +Y 
Sbjct: 120 AARNCLVGENNV---LKISDFGMSR----QEDDGIYSSSGLKQIPIKWTAPEALNYGRYS 172

Query: 66  AKADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCR 124
           +++D+WS G +L++  + G  P+ G    Q  + +     +  P    ++++     + R
Sbjct: 173 SESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYK---VMQR 229

Query: 125 CLLRQNPVERITFKE 139
           C     P  R  F E
Sbjct: 230 C-WDYKPENRPKFSE 243

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 40.1 bits (94), Expect = 0.002
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 7/115 (6%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N L++      V KI DFG AR +           + L   +M PE   +  + +K 
Sbjct: 143 AARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKT 202

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           D+WS G +L+++ + G  P+ G    ++ + +     L  P   PG +  +  DC
Sbjct: 203 DVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPPKGCPGPVYRIMTDC 257

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 40.4 bits (94), Expect = 0.002
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 9/94 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L+   ++   +KI DFG AR +  +D      GS   PL +MAPE I N+ Y   
Sbjct: 266 AARNVLICEGKL---VKICDFGLARDIM-RDSNYISKGSTFLPLKWMAPESIFNNLYTTL 321

Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNIL 100
           +D+WS G +L+++ T G  P+      + F N +
Sbjct: 322 SDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAI 355

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	568
PF12063	238	DUF3543: Domain of unknown function (DUF3543); Int	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	99.96
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.96
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	99.96
KOG0598	357	consensus Ribosomal protein S6 kinase and related	99.96
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	99.95
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	99.95
KOG0605	550	consensus NDR and related serine/threonine kinases	99.95
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.95
KOG0578	550	consensus p21-activated serine/threonine protein k	99.95
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	99.95
KOG0595	429	consensus Serine/threonine-protein kinase involved	99.95
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.95
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.94
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	99.94
KOG0583	370	consensus Serine/threonine protein kinase [Signal	99.94
KOG0661	538	consensus MAPK related serine/threonine protein ki	99.94
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	99.93
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.93
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.93
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.93
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	99.93
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	99.93
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.93
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	99.92
KOG0198	313	consensus MEKK and related serine/threonine protei	99.92
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	99.92
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.92
PTZ00036	440	glycogen synthase kinase; Provisional	99.92
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	99.92
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.92
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.92
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.91
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.91
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.91
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.91
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.91
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.91
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	99.91
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.91
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	99.91
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.91
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.91
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.91
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.91
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.91
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.91
PTZ00284	467	protein kinase; Provisional	99.91
KOG0690	516	consensus Serine/threonine protein kinase [Signal	99.91
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.91
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.91
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.91
KOG0610	459	consensus Putative serine/threonine protein kinase	99.91
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.91
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.91
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.91
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.91
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.91
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.91
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.91
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.91
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	99.91
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	99.91
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.91
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.91
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.91
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.91
KOG0589	426	consensus Serine/threonine protein kinase [General	99.91
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	99.91
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.91
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.91
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.9
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.9
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.9
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.9
PTZ00283	496	serine/threonine protein kinase; Provisional	99.9
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.9
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.9
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.9
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.9
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.9
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.9
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.9
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.9
PTZ00267	478	NIMA-related protein kinase; Provisional	99.9
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.9
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.9
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.9
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.9
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.9
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.9
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	99.9
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	99.9
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	99.9
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.9
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	99.9
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.9
KOG4717	864	consensus Serine/threonine protein kinase [Signal	99.89
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.89
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.89
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.89
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.89
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.89
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.89
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.89
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.89
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.89
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.89
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.89
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.89
PHA03212	391	serine/threonine kinase US3; Provisional	99.89
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.89
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.89
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.89
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.89
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.89
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.89
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.89
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.88
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.88
PHA03207	392	serine/threonine kinase US3; Provisional	99.88
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.88
PHA03209	357	serine/threonine kinase US3; Provisional	99.88
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	99.88
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.88
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.88
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.88
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.88
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.88
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.88
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.87
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.87
KOG0577	948	consensus Serine/threonine protein kinase [Signal	99.87
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.87
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.87
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.87
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	99.87
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.87
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.87
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.87
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.87
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.87
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.87
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.87
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.87
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.87
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.87
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.87
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.87
PHA03211	461	serine/threonine kinase US3; Provisional	99.87
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.87
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.87
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.87
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.87
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.87
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.87
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.87
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.87
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.87
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.87
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.87
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.87
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.87
PHA02988	283	hypothetical protein; Provisional	99.86
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.86
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.86
PHA03210	501	serine/threonine kinase US3; Provisional	99.86
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.86
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.86
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.86
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.86
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.86
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.86
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.86
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.86
KOG0607	463	consensus MAP kinase-interacting kinase and relate	99.86
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.86
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.86
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.86
PHA02882	294	putative serine/threonine kinase; Provisional	99.86
KOG0584	632	consensus Serine/threonine protein kinase [General	99.86
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.86
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.86
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.86
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.86
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.86
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.86
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.86
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.86
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.86
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.86
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.86
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.85
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.85
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.85
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.85
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.85
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.85
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.85
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.85
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.85
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.85
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.85
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.85
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.85
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.85
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.85
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.85
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.85
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.85
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.85
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.85
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	99.85
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.85
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.85
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.85
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.85
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.85
PLN00009	294	cyclin-dependent kinase A; Provisional	99.85
KOG0611	668	consensus Predicted serine/threonine protein kinas	99.85
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.85
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.85
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.85
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.85
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.85
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.85
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.85
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.85
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.85
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.85
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.85
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.85
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.85
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.84
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.84
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.84
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.84
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.84
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.84
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.84
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.84
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.84
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.84
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.84
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.84
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.84
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.84
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.84
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.84
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.84
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.84
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.84
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.84
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.84
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.84
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.84
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.84
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.84
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.84
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.84
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.84
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.84
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.84
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.84
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.84
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.84
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.84
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.84
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.84
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.84
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.84
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.84
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.84
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.84
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.84
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.84
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.83
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.83
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.83
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.83
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.83
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.83
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.83
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.83
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.83
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.83
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.83
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.83
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.83
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.83
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.83
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.83
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.83
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.83
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	99.83
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.83
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.83
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.83
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.83
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.83
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.83
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.83
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.83
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.83
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.83
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.83
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.82
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.82
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.82
PLN00181	793	protein SPA1-RELATED; Provisional	99.82
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.82
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.82
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.82
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.82
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.82
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.82
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.82
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.82
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.82
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.82
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.82
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.82
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.82
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.82
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.82
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.82
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.82
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.82
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.82
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.82
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.81
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.81
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.81
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.81
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.81
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.81
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.81
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.81
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.81
KOG0586	596	consensus Serine/threonine protein kinase [General	99.81
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.81
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.81
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.81
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.81
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.81
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.81
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.81
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.81
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.81
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.81
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.81
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.8
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.8
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.8
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.8
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.8
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.8
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.8
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.8
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.8
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.8
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.8
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.8
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.8
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.79
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.79
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.79
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.79
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.79
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.79
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.79
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.78
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.78
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.78
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.78
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.78
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.78
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.78
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.77
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.77
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.77
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.77
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.76
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.76
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.75
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.75
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.75
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.75
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.74
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.74
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.74
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.72
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.68
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.68
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.67
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.64
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.63
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.61
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.61
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.6
KOG3653	534	consensus Transforming growth factor beta/activin	99.56
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.56
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.55
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.53
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.51
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.5
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.47
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.44
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.43
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.4
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.29
KOG1152	772	consensus Signal transduction serine/threonine kin	99.28
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.19
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.17
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.12
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.01
KOG0606	1205	consensus Microtubule-associated serine/threonine	98.98
KOG0590	601	consensus Checkpoint kinase and related serine/thr	98.94
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	98.73
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	98.71
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	98.61
PRK12274	218	serine/threonine protein kinase; Provisional	98.58
PRK09188	365	serine/threonine protein kinase; Provisional	98.48
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	98.48
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.37
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.32
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.31
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.09
KOG1266	458	consensus Protein kinase [Signal transduction mech	97.71
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.46
COG4248	637	Uncharacterized protein with protein kinase and he	97.45
PRK10345	210	hypothetical protein; Provisional	97.26
smart00090	237	RIO RIO-like kinase.	97.19
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	97.14
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	97.02
PRK14879	211	serine/threonine protein kinase; Provisional	96.83
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	96.82
PRK09605	535	bifunctional UGMP family protein/serine/threonine	96.75
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	96.35
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	95.84
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	95.6
KOG3087	229	consensus Serine/threonine protein kinase [General	95.48
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	95.37
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	95.31
KOG0576	829	consensus Mitogen-activated protein kinase kinase	94.9
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	94.88
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	92.96
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	91.44
PRK05231	319	homoserine kinase; Provisional	90.02
KOG1243	690	consensus Protein kinase [General function predict	89.94
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	89.94
PF01636	239	APH: Phosphotransferase enzyme family This family	88.71
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	87.27
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	87.16
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	86.75
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	86.39
COG0478	304	RIO-like serine/threonine protein kinase fused to	86.14
KOG1093	725	consensus Predicted protein kinase (contains TBC a	84.83
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	84.76
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	84.4
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	84.3
PRK10271	188	thiK thiamine kinase; Provisional	83.69
cd02656	75	MIT MIT: domain contained within Microtubule Inter	83.15
PRK09902	216	hypothetical protein; Provisional	82.77
COG2334	331	Putative homoserine kinase type II (protein kinase	82.35
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	82.01
PF04212	69	MIT: MIT (microtubule interacting and transport) d	81.37
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	81.33
smart00587	196	CHK ZnF_C4 abd HLH domain containing kinases domai	80.46

>PF12063 DUF3543: Domain of unknown function (DUF3543); InterPro: IPR022708 This domain belonging to serine/threonine-protein kinases is functionally uncharacterised

Probab=100.00  E-value=4.8e-33  Score=277.64  Aligned_cols=181  Identities=28%  Similarity=0.457  Sum_probs=154.4

Q ss_pred             CchhHHHHHHHHHHHHHHHHHHhhc-----c---------------------cchhHHHHHHHHH-----HHHHHHHHHh
Q 008370          346 PSTGLQLLHQYVHALTELAEAKYDA-----G---------------------LFLESFSVELVVL-----AIWKKALQIC  394 (568)
Q Consensus       346 ~~~rl~~l~~~a~~i~~~a~~k~~~-----~---------------------~~le~~s~~lv~L-----a~~~~a~~i~  394 (568)
                      .+.+|+.+.+.+++|.+||++|+++     +                     ...+.++.|.++|     ++|++||++|
T Consensus        11 ~l~~Le~~a~~a~~v~~~Ae~k~~ql~p~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~E~LVLYvKaL~lLa~am~~a   90 (238)
T PF12063_consen   11 ILAKLEFLAAKADVVYEFAEVKYSQLIPLAPSSSSGLQRSSVSSAEDDDLTPDASEELSAEALVLYVKALSLLAKAMDIA   90 (238)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhccccCCCCccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            5689999999999999999999998     1                     1234567777766     9999999999


Q ss_pred             hhhhhccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhhhccC-----CCCCC
Q 008370          395 GSWLTSMSHGELPGPSSAYGHTPVQGGISSDPNSENNVDFSSPFSVSTWAEQGFILAFDRAEKLSYNIRD-----SDGAA  469 (568)
Q Consensus       395 ~~~~~s~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~aE~~~~~~~~-----~~~~~  469 (568)
                      +.||..+++.       ...-.|+           .     +.+.+++|++++||+|++|||+++.++.+     .++..
T Consensus        91 ~~~w~~~~~~-------~~~~~~S-----------~-----~vn~vVqwlr~rfneclekae~lr~~l~~~~~~l~~~~~  147 (238)
T PF12063_consen   91 SAWWYSKNRG-------SGSLNPS-----------S-----RVNQVVQWLRERFNECLEKAEFLRLRLQEAQKQLPDDHP  147 (238)
T ss_pred             HHHHHHhccc-------ccccCcc-----------H-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccccc
Confidence            9999996533       0011122           2     89999999999999999999999999922     36667


Q ss_pred             CCCc-----HHHHHHHHHHhhhhhhHHHHhhc-ccchhHHHHHHHHHHHHHHHhhcccCCCCCCCCCChhhHHHHHHHHH
Q 008370          470 EMPD-----AMEIIYQRALSVGKIGAVEEYMG-NKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYIN  543 (568)
Q Consensus       470 ~mpd-----a~e~ifq~aL~~gr~~av~El~~-~~~~~~~~Y~~a~~lL~fll~e~~~l~~np~~~l~~~d~~r~~~~i~  543 (568)
                      .||+     |+||||++||+|+|+||++||+| +-++|+..|.||+|||++||+++   ..++.-.++.+||++|.+||+
T Consensus       148 ~~~~~~~itAekLiYdrALemsr~AA~~El~g~~~~~ce~~Y~tA~~lLe~Ll~~~---~~~~~~~~~~~Dr~~i~k~i~  224 (238)
T PF12063_consen  148 SMPSSSGITAEKLIYDRALEMSRTAAVDELFGENLEGCEQRYETAIWLLEALLDDD---DLEEENPLDEEDREIIKKYID  224 (238)
T ss_pred             cccCccccCHHHHHHHHHHHHHHHHHHHHHhCcCHhHHHHHHHHHHHHHHHHHhHh---hccccCCCCHHHHHHHHHHHH
Confidence            7888     99999999999999999999999 77999999999999999999999   344444589999999999999


Q ss_pred             HHhhhhhhe
Q 008370          544 NLQSHQSNF  552 (568)
Q Consensus       544 ~l~~rl~~~  552 (568)
                      +|.+||+.|
T Consensus       225 sI~~RL~~L  233 (238)
T PF12063_consen  225 SIENRLSAL  233 (238)
T ss_pred             HHHHHHHHH
Confidence            999999976

This domain is found in eukaryotes. It is typically between 217 to 291 amino acids in length and is found associated with PF00069 from PFAM. This domain has a single completely conserved residue A that may be functionally important. ; GO: 0004674 protein serine/threonine kinase activity

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=99.96  E-value=3.3e-31  Score=274.42  Aligned_cols=148  Identities=30%  Similarity=0.527  Sum_probs=130.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCC---CcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKY---DAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~y---s~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||+..+...-.+||+|||+|+..+.....+++||||.|.|||++....+   ..++|+||+||+||
T Consensus       293 H~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLf  372 (475)
T KOG0615|consen  293 HSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLF  372 (475)
T ss_pred             HHcCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEE
Confidence            556999999999999999886666899999999999988889999999999999999976543   34789999999999


Q ss_pred             HHHhCCCCCCCCcHHH-HHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           79 QLVTGKPPFDGSNQLQ-LFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        79 ELltG~~PF~g~~~~~-~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      -+++|.+||.+..... ..++|.++ .+.+-+..|.+++.+..+||.+||..||++||+++|+|+||||+...
T Consensus       373 vcLsG~pPFS~~~~~~sl~eQI~~G-~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  373 VCLSGYPPFSEEYTDPSLKEQILKG-RYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             EEeccCCCcccccCCccHHHHHhcC-cccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            9999999999876655 55566554 66777778899999999999999999999999999999999998654

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.96  E-value=4.2e-30  Score=264.10  Aligned_cols=140  Identities=32%  Similarity=0.615  Sum_probs=126.1

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhC
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG   83 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG   83 (568)
                      .+||||||||+|||++..+   .|||||||.++.+... .+.+++||..|||||.+.+..|+.++||||||++++|+.+|
T Consensus       198 ~~IIHRDIKPsNlLvNskG---eVKicDFGVS~~lvnS-~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~G  273 (364)
T KOG0581|consen  198 RKIIHRDIKPSNLLVNSKG---EVKICDFGVSGILVNS-IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIG  273 (364)
T ss_pred             cCeeeccCCHHHeeeccCC---CEEeccccccHHhhhh-hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhC
Confidence            6899999999999999887   7999999999988765 78899999999999999999999999999999999999999


Q ss_pred             CCCCCCC-----cHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           84 KPPFDGS-----NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        84 ~~PF~g~-----~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +.||...     +..+++..|+....+.+|..   .+++++.+|+.+||++||.+|+++.|+++|||+.+..
T Consensus       274 rfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~---~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  274 RFPYPPPNPPYLDIFELLCAIVDEPPPRLPEG---EFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE  342 (364)
T ss_pred             CCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcc---cCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence            9999874     56778888887655555543   4899999999999999999999999999999997654

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=99.96  E-value=5.2e-30  Score=272.90  Aligned_cols=145  Identities=29%  Similarity=0.571  Sum_probs=131.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--------------CCccccCCCcccChhhhccCCCCc
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--------------LADTLCGSPLYMAPEIIQNHKYDA   66 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--------------~~~t~~GT~~YmAPEvl~~~~ys~   66 (568)
                      ||..|||||||||+||||+.++   ++||+|||-|+.+.+..              ...+++||..|.+||++.....++
T Consensus       190 lH~~GIIHRDlKPENILLd~dm---hikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~  266 (604)
T KOG0592|consen  190 LHSNGIIHRDLKPENILLDKDG---HIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGP  266 (604)
T ss_pred             HHhcCceeccCChhheeEcCCC---cEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCc
Confidence            7889999999999999999998   79999999999875321              124589999999999999999999


Q ss_pred             ccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           67 KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        67 ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      .+|+|+|||++|+|+.|++||.+.+...++++|+.. .+.||+    .+++.+.+|++++|..||.+|+|+++|.+||||
T Consensus       267 ~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l-~y~fp~----~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF  341 (604)
T KOG0592|consen  267 SSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQAL-DYEFPE----GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFF  341 (604)
T ss_pred             ccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHh-cccCCC----CCCHHHHHHHHHHHccCccccccHHHHhhCccc
Confidence            999999999999999999999999999999999875 667776    567899999999999999999999999999999


Q ss_pred             HHhHHhh
Q 008370          147 GELRQTV  153 (568)
Q Consensus       147 ~~~~~~~  153 (568)
                      ..+.|..
T Consensus       342 ~~Vdw~n  348 (604)
T KOG0592|consen  342 EGVDWEN  348 (604)
T ss_pred             ccCChhh
Confidence            9998865

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=99.96  E-value=4e-30  Score=264.14  Aligned_cols=149  Identities=31%  Similarity=0.589  Sum_probs=131.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeeccccee-cCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS-LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~-l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      +|..|||||||||+||||+..|   +|+|+|||+++. ........++|||+.|||||++.+.+|+..+|+||+|+++|+
T Consensus       141 LH~~gIiyRDlKPENILLd~~G---Hi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYe  217 (357)
T KOG0598|consen  141 LHSKGIIYRDLKPENILLDEQG---HIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYE  217 (357)
T ss_pred             HHhCCeeeccCCHHHeeecCCC---cEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHH
Confidence            3667999999999999999988   899999999995 445567788999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC----CHHHHHhchhHHHhHHhhhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI----TFKEFFNHRFLGELRQTVHA  155 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp----TaeElL~Hpff~~~~~~~~~  155 (568)
                      |++|.+||.+.+...++.+|....... ++   ..++.+++++++++|.+||++|.    .++++.+||||..+.|....
T Consensus       218 ML~G~pPF~~~~~~~~~~~I~~~k~~~-~p---~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~inW~~l~  293 (357)
T KOG0598|consen  218 MLTGKPPFYAEDVKKMYDKILKGKLPL-PP---GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGINWEKLL  293 (357)
T ss_pred             HhhCCCCCcCccHHHHHHHHhcCcCCC-CC---ccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCCHHHHH
Confidence            999999999999999999998764232 22   24789999999999999999996    68899999999999987554


Q ss_pred             h
Q 008370          156 E  156 (568)
Q Consensus       156 ~  156 (568)
                      .
T Consensus       294 ~  294 (357)
T KOG0598|consen  294 A  294 (357)
T ss_pred             h
Confidence            3

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.95  E-value=1.7e-28  Score=239.97  Aligned_cols=145  Identities=27%  Similarity=0.547  Sum_probs=134.6

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhC
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG   83 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG   83 (568)
                      -+|||||+||+|+|+.......-+||+|||+|..+........++|||.|||||++...+|+..+|||+.||+||-|+.|
T Consensus       129 n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G  208 (355)
T KOG0033|consen  129 NGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG  208 (355)
T ss_pred             cCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhC
Confidence            38999999999999987766678999999999999877778889999999999999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           84 KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        84 ~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      .+||.+++...+++.|+.+ .+.+++..|..+++++++|+++||..||.+|+|+.|.|+|||+.+-
T Consensus       209 ~~PF~~~~~~rlye~I~~g-~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r  273 (355)
T KOG0033|consen  209 YPPFWDEDQHRLYEQIKAG-AYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNR  273 (355)
T ss_pred             CCCCCCccHHHHHHHHhcc-ccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcch
Confidence            9999999999999998875 6778888899999999999999999999999999999999999643

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=99.95  E-value=9.5e-29  Score=247.37  Aligned_cols=147  Identities=31%  Similarity=0.636  Sum_probs=133.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||+.+|++|||||+||||+.+|   ++||+|||+|+.+...  +.+.||||.|+|||++...+|+..+|+|+|||++|||
T Consensus       160 lH~~~iiYRDLKPENiLlD~~G---~iKitDFGFAK~v~~r--T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEM  234 (355)
T KOG0616|consen  160 LHSLDIIYRDLKPENLLLDQNG---HIKITDFGFAKRVSGR--TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEM  234 (355)
T ss_pred             HHhcCeeeccCChHHeeeccCC---cEEEEeccceEEecCc--EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHH
Confidence            5778999999999999999988   7999999999987654  6789999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHhhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQTVHA  155 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~~~~  155 (568)
                      +.|.+||...+..+++.+|+.+ ...+|.    .+++++++|++++|+.|-.+|.     ...++.+||||+.+.|....
T Consensus       235 laG~pPF~~~~~~~iY~KI~~~-~v~fP~----~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~W~~i~  309 (355)
T KOG0616|consen  235 LAGYPPFYDDNPIQIYEKILEG-KVKFPS----YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVDWEAIL  309 (355)
T ss_pred             HcCCCCCcCCChHHHHHHHHhC-cccCCc----ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccccHHHHh
Confidence            9999999999999999999976 566775    6799999999999999999994     56799999999999887654


Q ss_pred             hc
Q 008370          156 EQ  157 (568)
Q Consensus       156 ~~  157 (568)
                      ..
T Consensus       310 ~r  311 (355)
T KOG0616|consen  310 QR  311 (355)
T ss_pred             hc
Confidence            44

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=99.95  E-value=9.7e-29  Score=263.29  Aligned_cols=152  Identities=28%  Similarity=0.530  Sum_probs=129.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC----------------------CC----------------
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP----------------------QD----------------   42 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~----------------------~~----------------   42 (568)
                      ||..|||||||||+|+||+..|   +|||+||||+.-+..                      ..                
T Consensus       257 iH~~gyIHRDIKPdNlLiD~~G---HiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (550)
T KOG0605|consen  257 IHQLGYIHRDIKPDNLLIDAKG---HIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQ  333 (550)
T ss_pred             HHHcCcccccCChhheeecCCC---CEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHH
Confidence            4678999999999999999988   899999999853211                      00                


Q ss_pred             ----------CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCc
Q 008370           43 ----------LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGA  111 (568)
Q Consensus        43 ----------~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~  111 (568)
                                .....+|||-|||||++.+.+|+..+|+||||||+|||+.|.+||.+.++.+++.+|+... .+.+|...
T Consensus       334 ~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~  413 (550)
T KOG0605|consen  334 LQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEV  413 (550)
T ss_pred             HHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcC
Confidence                      1123579999999999999999999999999999999999999999999999999998765 45666654


Q ss_pred             ccccCHHHHHHHHHhhccCCCCCCC---HHHHHhchhHHHhHHhhhhhcc
Q 008370          112 IEELHPDCVDLCRCLLRQNPVERIT---FKEFFNHRFLGELRQTVHAEQH  158 (568)
Q Consensus       112 ~~~ls~~~~dLI~~cL~~dP~~RpT---aeElL~Hpff~~~~~~~~~~~~  158 (568)
                        .++++++|||.+||. ||.+|+.   ++||.+||||..+.|....+..
T Consensus       414 --~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~~~  460 (550)
T KOG0605|consen  414 --DLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLREMP  460 (550)
T ss_pred             --cccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhhcCC
Confidence              667999999999999 9999985   8999999999999987554443

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=1.4e-28  Score=265.40  Aligned_cols=139  Identities=34%  Similarity=0.660  Sum_probs=127.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|||||||..|+||+.+.   .|||+|||+|..+... +...+.||||.|.|||++...+++..+||||+||++|.
T Consensus       134 LH~~~IiHRDLKLGNlfL~~~~---~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYt  210 (592)
T KOG0575|consen  134 LHSLGIIHRDLKLGNLFLNENM---NVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYT  210 (592)
T ss_pred             HHhcCceecccchhheeecCcC---cEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHh
Confidence            5778999999999999999987   6999999999988744 77889999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                      |+.|++||...+..+++.+|... .+.+|.    .++.++++||.+||+.||.+|||+++|+.|+||.
T Consensus       211 LL~G~PPFetk~vkety~~Ik~~-~Y~~P~----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~  273 (592)
T KOG0575|consen  211 LLVGRPPFETKTVKETYNKIKLN-EYSMPS----HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFK  273 (592)
T ss_pred             hhhCCCCcccchHHHHHHHHHhc-Cccccc----ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhh
Confidence            99999999999999999988765 555554    7899999999999999999999999999999993

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=3.5e-28  Score=260.63  Aligned_cols=144  Identities=28%  Similarity=0.519  Sum_probs=130.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      +|..||||||||.+|||++.++   .+||+|||||..+.... ...+.+|||+|||||++....|++++||||||++++|
T Consensus       385 LH~~gIiHrDIKSDnILL~~~g---~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIE  461 (550)
T KOG0578|consen  385 LHARGIIHRDIKSDNILLTMDG---SVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIE  461 (550)
T ss_pred             HHhcceeeeccccceeEeccCC---cEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHH
Confidence            3567999999999999999988   59999999999887655 6678999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |+-|.+||..+++...++.|...+.+.+..  +..+++.+++|+.+||+.|+.+|+++.|+|+||||...
T Consensus       462 MveGEPPYlnE~PlrAlyLIa~ng~P~lk~--~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a  529 (550)
T KOG0578|consen  462 MVEGEPPYLNENPLRALYLIATNGTPKLKN--PEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMA  529 (550)
T ss_pred             HhcCCCCccCCChHHHHHHHhhcCCCCcCC--ccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence            999999999999999998888777665543  45899999999999999999999999999999999543

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=99.95  E-value=3.7e-28  Score=240.58  Aligned_cols=148  Identities=32%  Similarity=0.573  Sum_probs=132.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc------CCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN------HKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~------~~ys~ksDIWSlG   74 (568)
                      ||...||||||||+|||++++.   .|||+|||+++.+...+.....||||.|+|||.+..      .+|+..+|+|++|
T Consensus       139 lHa~~IVHRDLKpENILlddn~---~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~G  215 (411)
T KOG0599|consen  139 LHARNIVHRDLKPENILLDDNM---NIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACG  215 (411)
T ss_pred             HHHhhhhhcccChhheeecccc---ceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHH
Confidence            3445899999999999999987   599999999999999999999999999999999853      4688889999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      |++|.++.|.+||.-....-++..|+.+ .+.|....|.+++.+.++||.+||+.||.+|+|++|+|.||||..+...
T Consensus       216 VImyTLLaGcpPFwHRkQmlMLR~ImeG-kyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~  292 (411)
T KOG0599|consen  216 VIMYTLLAGCPPFWHRKQMLMLRMIMEG-KYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQ  292 (411)
T ss_pred             HHHHHHHcCCCchhHHHHHHHHHHHHhc-ccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHh
Confidence            9999999999999877777777777654 7788888899999999999999999999999999999999999887654

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.95  E-value=4.5e-27  Score=243.97  Aligned_cols=146  Identities=49%  Similarity=0.808  Sum_probs=127.7

Q ss_pred             CCCCeEecCCCCCCeEEecC-CCC--CcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTN-EVT--PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~-~~~--~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      +..+||||||||+||||+.. ...  +++||+|||+||.+.......+.||+|.|||||++..+.|+.|+|+||+|+++|
T Consensus       126 ~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ily  205 (429)
T KOG0595|consen  126 HENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILY  205 (429)
T ss_pred             HHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHH
Confidence            44689999999999999987 333  789999999999999988999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +|++|++||...+..+++..+..+...  .+.....++..+.+|+...|+.+|.+|.++.+.+.|+++..-
T Consensus       206 q~l~g~~Pf~a~t~~eL~~~~~k~~~~--~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~  274 (429)
T KOG0595|consen  206 QCLTGKPPFDAETPKELLLYIKKGNEI--VPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAAN  274 (429)
T ss_pred             HHHhCCCCccccCHHHHHHHHhccccc--cCchhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccC
Confidence            999999999999999998877655432  222334667778899999999999999999999999988543

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=8.9e-28  Score=261.98  Aligned_cols=147  Identities=29%  Similarity=0.605  Sum_probs=132.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||||||||.+||||+..|   ++||+|||+++... ....+.|+||||.|||||++.+..|+..+|+|+|||+||||
T Consensus       485 H~~~IIYRDlKLdNiLLD~eG---h~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeM  561 (694)
T KOG0694|consen  485 HENGIIYRDLKLDNLLLDTEG---HVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEM  561 (694)
T ss_pred             HhcCceeeecchhheEEcccC---cEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHH
Confidence            557999999999999999988   89999999999754 56678999999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH-----HHHHhchhHHHhHHhhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF-----KEFFNHRFLGELRQTVHA  155 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa-----eElL~Hpff~~~~~~~~~  155 (568)
                      +.|+.||.|++..+.+..|+.. .+.+|    ..++.++.++|+++|.++|++|+.+     ++|..||||+.+.|....
T Consensus       562 L~Gq~PF~gddEee~FdsI~~d-~~~yP----~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~w~~L~  636 (694)
T KOG0694|consen  562 LVGESPFPGDDEEEVFDSIVND-EVRYP----RFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSIDWDDLL  636 (694)
T ss_pred             HcCCCCCCCCCHHHHHHHHhcC-CCCCC----CcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCCHHHHh
Confidence            9999999999999999999865 44444    4789999999999999999999965     789999999999987554


Q ss_pred             h
Q 008370          156 E  156 (568)
Q Consensus       156 ~  156 (568)
                      .
T Consensus       637 ~  637 (694)
T KOG0694|consen  637 N  637 (694)
T ss_pred             h
Confidence            3

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.94  E-value=9e-28  Score=260.41  Aligned_cols=141  Identities=37%  Similarity=0.629  Sum_probs=128.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCC-cccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYD-AKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys-~ksDIWSlGviL~EL   80 (568)
                      |..+|+||||||+|+||+..+   .|||+|||+|..-..+.+..+.||+|+|.|||++.+.+|+ .++||||+|||||.|
T Consensus       129 H~~~icHRDLKpENlLLd~~~---nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfAL  205 (786)
T KOG0588|consen  129 HAFNICHRDLKPENLLLDVKN---NIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFAL  205 (786)
T ss_pred             hhhcceeccCCchhhhhhccc---CEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHH
Confidence            557999999999999999887   3999999999988888999999999999999999999996 569999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|+.||.+.+-..++.++..+ .+.+|    ..+++++.+||++||..||.+|+|.+||++|||+....
T Consensus       206 LtG~LPFdDdNir~LLlKV~~G-~f~MP----s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~  270 (786)
T KOG0588|consen  206 LTGKLPFDDDNIRVLLLKVQRG-VFEMP----SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT  270 (786)
T ss_pred             HhCCCCCCCccHHHHHHHHHcC-cccCC----CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence            9999999998888888877654 66666    47899999999999999999999999999999997654

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=99.94  E-value=8.8e-28  Score=240.95  Aligned_cols=147  Identities=25%  Similarity=0.518  Sum_probs=123.9

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHHH
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~EL   80 (568)
                      ..+||||||||+||||+.++   ++||||||+|+.+. +...+..++.|.+|+|||.+.+ ..|+..+|||++||++.||
T Consensus       119 k~n~IHRDIKPENILit~~g---vvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl  195 (396)
T KOG0593|consen  119 KNNCIHRDIKPENILITQNG---VVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAEL  195 (396)
T ss_pred             hcCeecccCChhheEEecCC---cEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHH
Confidence            35899999999999999988   89999999999987 6777888899999999999987 7899999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccC------------------CCCCC--------CcccccCHHHHHHHHHhhccCCCCC
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTE------------------LRFPP--------GAIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~------------------~~~p~--------~~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      ++|.+.|+|..+.++++.|...-.                  ..+|.        .....++.-+.+|+++||+.||++|
T Consensus       196 ~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R  275 (396)
T KOG0593|consen  196 LTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDR  275 (396)
T ss_pred             hcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCcccc
Confidence            999999999999888877754210                  01111        1123455678999999999999999


Q ss_pred             CCHHHHHhchhHHHhHHh
Q 008370          135 ITFKEFFNHRFLGELRQT  152 (568)
Q Consensus       135 pTaeElL~Hpff~~~~~~  152 (568)
                      ++.++++.|+||..+...
T Consensus       276 ~sc~qll~H~yFd~~~er  293 (396)
T KOG0593|consen  276 LSCEQLLHHPYFDGFIER  293 (396)
T ss_pred             ccHHHHhcChHHHHHHHH
Confidence            999999999999766543

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=9.1e-27  Score=247.90  Aligned_cols=140  Identities=34%  Similarity=0.619  Sum_probs=125.2

Q ss_pred             CCCCCeEecCCCCCCeEEecC-CCCCcEEEeecccceec-CCCCCCccccCCCcccChhhhccCC-CC-cccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTN-EVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHK-YD-AKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~-~~~~vvKL~DFGlAr~l-~~~~~~~t~~GT~~YmAPEvl~~~~-ys-~ksDIWSlGvi   76 (568)
                      +|..||+||||||+|||++.+ +   .+||+|||++... .......+.|||+.|+|||++.+.. |+ .++||||+||+
T Consensus       136 ~H~~gi~HRDLK~ENilld~~~~---~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GVi  212 (370)
T KOG0583|consen  136 CHSRGIVHRDLKPENILLDGNEG---NLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVI  212 (370)
T ss_pred             HHhCCEeeCCCCHHHEEecCCCC---CEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHH
Confidence            366799999999999999998 5   6999999999988 5667889999999999999999987 86 66999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCccccc-CHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEEL-HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~l-s~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ||.|++|+.||...+...++.+|..+ .+.+|.    .+ ++++.+|+.+||..||.+|+++.+++.||||+.
T Consensus       213 Ly~ml~G~~PF~d~~~~~l~~ki~~~-~~~~p~----~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  213 LYVLLCGRLPFDDSNVPNLYRKIRKG-EFKIPS----YLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHHHHhCCCCCCCccHHHHHHHHhcC-CccCCC----CcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            99999999999998888888886554 566665    44 999999999999999999999999999999975

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=8.4e-27  Score=245.33  Aligned_cols=148  Identities=26%  Similarity=0.448  Sum_probs=126.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc-cCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ-NHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~-~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..|+.||||||+|||+..+.   +|||+|||+||.+.....+..++.|.+|+|||++. ..-|+.++|+|++|||++|
T Consensus       126 iHk~GfFHRDlKPENiLi~~~~---~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aE  202 (538)
T KOG0661|consen  126 IHKHGFFHRDLKPENILISGND---VIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAE  202 (538)
T ss_pred             HHhcCcccccCChhheEecccc---eeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHH
Confidence            6778999999999999999655   79999999999998888888899999999999875 5678999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhcc------------------CCCCCCC-------cccccCHHHHHHHHHhhccCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTST------------------ELRFPPG-------AIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~------------------~~~~p~~-------~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      +.+-++.|.|.+..+.+.+|..-.                  .+.+|..       .....++++.+||.+||.+||.+|
T Consensus       203 l~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kR  282 (538)
T KOG0661|consen  203 LYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKR  282 (538)
T ss_pred             HHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccC
Confidence            999999999999999988886421                  1223321       123457899999999999999999


Q ss_pred             CCHHHHHhchhHHHhHH
Q 008370          135 ITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       135 pTaeElL~Hpff~~~~~  151 (568)
                      ||+.++++||||+....
T Consensus       283 pTA~~al~~pffq~~~~  299 (538)
T KOG0661|consen  283 PTASQALQHPFFQVGRA  299 (538)
T ss_pred             ccHHHHhcCcccccccc
Confidence            99999999999976543

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=99.93  E-value=4.7e-27  Score=235.39  Aligned_cols=147  Identities=31%  Similarity=0.562  Sum_probs=130.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |.+.|.||||||+|+|......+..+||+|||+|+.........+.|-||+|.|||++...+|+..+|+||+||++|-|+
T Consensus       178 H~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlL  257 (400)
T KOG0604|consen  178 HSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL  257 (400)
T ss_pred             HhcchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhh
Confidence            56789999999999999988877899999999999877666778899999999999999999999999999999999999


Q ss_pred             hCCCCCCCCcHH----HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           82 TGKPPFDGSNQL----QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        82 tG~~PF~g~~~~----~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +|.+||......    .+..+| ..+.+.||...|..++.+.+++|+++|+.+|.+|+|+++++.|||+...
T Consensus       258 CGyPPFYS~hg~aispgMk~rI-~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~  328 (400)
T KOG0604|consen  258 CGYPPFYSNHGLAISPGMKRRI-RTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY  328 (400)
T ss_pred             cCCCcccccCCccCChhHHhHh-hccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence            999999865432    233444 4458899999999999999999999999999999999999999999543

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.93  E-value=9.8e-27  Score=231.51  Aligned_cols=141  Identities=28%  Similarity=0.534  Sum_probs=120.8

Q ss_pred             CCC--CC--eEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHH
Q 008370            1 MCY--VF--MIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA   75 (568)
Q Consensus         1 m~~--~~--IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGv   75 (568)
                      |||  ++  |+||||||-||+|+.++   ++||+|||+++.+.... ...+.+|||+||+||++...+|+.++||||+||
T Consensus       140 cH~~~~r~~VmHRDIKPaNIFl~~~g---vvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGC  216 (375)
T KOG0591|consen  140 CHSKIPRGTVMHRDIKPANIFLTANG---VVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGC  216 (375)
T ss_pred             HhccccccceeeccCcchheEEcCCC---ceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHH
Confidence            455  56  99999999999999888   89999999999887543 456789999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      ++|||+.-++||.|.+-.++..+|..+...+.|.   ...+.++..++..|+..||+.||+.     +|++..+...
T Consensus       217 llyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~---~~YS~~l~~li~~ci~vd~~~RP~t-----~~~v~di~~~  285 (375)
T KOG0591|consen  217 LLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPD---EHYSTDLRELINMCIAVDPEQRPDT-----VPYVQDIQSE  285 (375)
T ss_pred             HHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcH---HHhhhHHHHHHHHHccCCcccCCCc-----chHHHHHHHH
Confidence            9999999999999999888888888764333332   4678899999999999999999986     5666655543

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.93  E-value=5.2e-26  Score=230.77  Aligned_cols=143  Identities=27%  Similarity=0.409  Sum_probs=118.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++............||+.|+|||++.+..++.++|||||||++|+|
T Consensus       126 lH~~~iiH~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el  202 (290)
T cd07862         126 LHSHRVVHRDLKPQNILVTSSG---QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEM  202 (290)
T ss_pred             HHHCCeeeCCCCHHHEEEcCCC---CEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHH
Confidence            4567999999999999998876   6999999999876655555567899999999999888899999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCC----------------------cccccCHHHHHHHHHhhccCCCCCCCHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPG----------------------AIEELHPDCVDLCRCLLRQNPVERITFK  138 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~----------------------~~~~ls~~~~dLI~~cL~~dP~~RpTae  138 (568)
                      ++|++||.+.+..+.+..+........+..                      ....+++.+.+|+.+||+.||++|||+.
T Consensus       203 ~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~  282 (290)
T cd07862         203 FRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAY  282 (290)
T ss_pred             HcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHH
Confidence            999999999887777766654322111100                      1124567889999999999999999999


Q ss_pred             HHHhchhH
Q 008370          139 EFFNHRFL  146 (568)
Q Consensus       139 ElL~Hpff  146 (568)
                      ++++||||
T Consensus       283 ~~l~hp~f  290 (290)
T cd07862         283 SALSHPYF  290 (290)
T ss_pred             HHhcCCCC
Confidence            99999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.93  E-value=7.3e-26  Score=235.18  Aligned_cols=146  Identities=29%  Similarity=0.636  Sum_probs=122.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++... ........+||+.|+|||++.+..++.++||||+||++|+
T Consensus       111 lH~~~ivHrDlkp~NIll~~~~---~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~e  187 (323)
T cd05571         111 LHSCDVVYRDLKLENLMLDKDG---HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE  187 (323)
T ss_pred             HHhCCeEeCCCCHHHEEECCCC---CEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhh
Confidence            4667999999999999998876   69999999997643 2233456789999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHhhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~~~  154 (568)
                      |++|+.||.+.+.......+... ...+|    ..+++++.+|+.+||..||++||     ++.++++||||..+.+...
T Consensus       188 lltg~~Pf~~~~~~~~~~~~~~~-~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~~  262 (323)
T cd05571         188 MMCGRLPFYNQDHEKLFELILME-EIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQDV  262 (323)
T ss_pred             hhcCCCCCCCCCHHHHHHHHHcC-CCCCC----CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHHH
Confidence            99999999988777766665543 33333    36789999999999999999999     8999999999988765533

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=99.93  E-value=6.7e-26  Score=241.86  Aligned_cols=143  Identities=31%  Similarity=0.623  Sum_probs=125.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..+|+|||+||+|||+..++   ++|+||||+||.+..+. ....+.|||.|||||++.+.+|+..+|+||+||++||+
T Consensus       117 hs~rilhrd~kPqniLl~~~~---~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~  193 (808)
T KOG0597|consen  117 HSNRILHRDMKPQNILLEKGG---TLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYEL  193 (808)
T ss_pred             HhcCcccccCCcceeeecCCC---ceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHH
Confidence            567999999999999999887   79999999999887544 45667899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      .+|++||....-.++...|.... ..+|    ..++..+.+|++.+|.+||.+|+++.+++.|||++.....
T Consensus       194 ~~G~PPF~a~si~~Lv~~I~~d~-v~~p----~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~~  260 (808)
T KOG0597|consen  194 YVGQPPFYARSITQLVKSILKDP-VKPP----STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKINI  260 (808)
T ss_pred             hcCCCCchHHHHHHHHHHHhcCC-CCCc----ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhhh
Confidence            99999999988888888887542 2222    3789999999999999999999999999999999775443

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=99.93  E-value=7.7e-26  Score=224.32  Aligned_cols=142  Identities=26%  Similarity=0.499  Sum_probs=123.3

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc---cCCCCcccchhhHHHHHHHH
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~---~~~ys~ksDIWSlGviL~EL   80 (568)
                      ++|||||+||+|||++..+   .||+||||++..+.+........|.+.|||||.+.   ...|+-++||||||+.++||
T Consensus       211 H~viHRDvKPSNILlDe~G---niKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveL  287 (391)
T KOG0983|consen  211 HGVIHRDVKPSNILLDERG---NIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVEL  287 (391)
T ss_pred             cceeecccCccceEEccCC---CEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhh
Confidence            5899999999999999988   69999999998888777666778999999999884   45789999999999999999


Q ss_pred             HhCCCCCCCCc-HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           81 VTGKPPFDGSN-QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        81 ltG~~PF~g~~-~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      .||+.||.+.+ ..+.+.+++....+.+|...  .+++++.+|+..||.+|+.+||...++|+|||+....
T Consensus       288 aTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~--gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye  356 (391)
T KOG0983|consen  288 ATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHM--GFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYE  356 (391)
T ss_pred             hcccCCCCCCCccHHHHHHHHhcCCCCCCccc--CcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecc
Confidence            99999999854 66788888876554455432  4899999999999999999999999999999986553

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.93  E-value=8.6e-26  Score=229.96  Aligned_cols=150  Identities=22%  Similarity=0.408  Sum_probs=119.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++............||+.|+|||++.+..|+.++||||+||++|+|
T Consensus       118 lH~~~iiH~dikp~Nill~~~~---~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el  194 (285)
T cd05631         118 LQRERIVYRDLKPENILLDDRG---HIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEM  194 (285)
T ss_pred             HHhCCEEeCCCCHHHEEECCCC---CEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHH
Confidence            4567999999999999998776   6999999999876554445567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~~~  154 (568)
                      ++|+.||.+.+.......+.... ...+......+++++.+|+++||..||.+||+     ++++++||||..+.+...
T Consensus       195 ~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~~~~~  272 (285)
T cd05631         195 IQGQSPFRKRKERVKREEVDRRV-KEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNINFKRL  272 (285)
T ss_pred             HhCCCCCCCCCcchhHHHHHHHh-hcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCCHHHH
Confidence            99999998765432222221111 11112233467889999999999999999997     899999999988766543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=8.6e-26  Score=231.61  Aligned_cols=148  Identities=31%  Similarity=0.500  Sum_probs=121.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC---CCCCccccCCCcccChhhhc-cCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQ-NHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~---~~~~~t~~GT~~YmAPEvl~-~~~ys~ksDIWSlGvi   76 (568)
                      +|..+|+||||||.|+|++.+.   .+||||||+||....   .......+.|.+|.|||++. ...|+...||||+|||
T Consensus       141 iHSAnViHRDLKPsNll~n~~c---~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI  217 (359)
T KOG0660|consen  141 IHSANVIHRDLKPSNLLLNADC---DLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCI  217 (359)
T ss_pred             hhcccccccccchhheeeccCC---CEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHH
Confidence            4667999999999999999988   589999999998753   33445678899999999875 5689999999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccC----------------------CCCCC----CcccccCHHHHHHHHHhhccC
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTE----------------------LRFPP----GAIEELHPDCVDLCRCLLRQN  130 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~----------------------~~~p~----~~~~~ls~~~~dLI~~cL~~d  130 (568)
                      +.||++|++.|.|.+..+.+..|+....                      +..|+    ......++.+.+|+.+||..|
T Consensus       218 ~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fd  297 (359)
T KOG0660|consen  218 LAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFD  297 (359)
T ss_pred             HHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccC
Confidence            9999999999999987777766653211                      11111    123466789999999999999


Q ss_pred             CCCCCCHHHHHhchhHHHhHH
Q 008370          131 PVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       131 P~~RpTaeElL~Hpff~~~~~  151 (568)
                      |.+|+|++|+|+||||..+..
T Consensus       298 P~kRita~eAL~hPYl~~~hd  318 (359)
T KOG0660|consen  298 PKKRITAEEALAHPYLAPYHD  318 (359)
T ss_pred             ccccCCHHHHhcChhhhhhcC
Confidence            999999999999999987753

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.92  E-value=4.6e-26  Score=235.85  Aligned_cols=143  Identities=28%  Similarity=0.500  Sum_probs=115.2

Q ss_pred             CCCCCeEecCCCCCCeEEec-CCCCCcEEEeecccceecCC----CCCCccccCCCcccChhhhccC-CCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVST-NEVTPVLKIGDFGFARSLTP----QDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~-~~~~~vvKL~DFGlAr~l~~----~~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlG   74 (568)
                      +|..|||||||||.|||++. ++   .+||+|||+++....    ......+.||+.|||||++... ....++||||+|
T Consensus       133 lHs~g~vH~DiK~~NiLl~~~~~---~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlG  209 (313)
T KOG0198|consen  133 LHSKGIVHCDIKPANILLDPSNG---DVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLG  209 (313)
T ss_pred             HHhCCEeccCcccceEEEeCCCC---eEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcC
Confidence            35679999999999999998 45   699999999987663    1223457899999999999853 233489999999


Q ss_pred             HHHHHHHhCCCCCCC-CcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           75 AILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        75 viL~ELltG~~PF~g-~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++.||+||++||.. ......+..+....  .. |..+..+++++++|+.+|+..+|.+|||++++|+|||....
T Consensus       210 CtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~--~~-P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~  282 (313)
T KOG0198|consen  210 CTVVEMLTGKPPWSEFFEEAEALLLIGRED--SL-PEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQN  282 (313)
T ss_pred             CEEEeccCCCCcchhhcchHHHHHHHhccC--CC-CCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence            999999999999987 44444444554443  12 24556789999999999999999999999999999998553

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.92  E-value=1.3e-25  Score=239.55  Aligned_cols=148  Identities=28%  Similarity=0.596  Sum_probs=135.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCC-CCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEV-TPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~-~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|+|+..... .+.+|++|||++..........+.|||+.|+|||++....|+..+||||+||++|.
T Consensus       151 lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yi  230 (382)
T KOG0032|consen  151 LHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYI  230 (382)
T ss_pred             HHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHH
Confidence            57789999999999999987653 34799999999999887667888999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++|.+||.+......+.+|..+ .+.++...|..++..+++|+++||..||.+|+|+.++++|||+...
T Consensus       231 LL~G~~PF~~~~~~~~~~~i~~~-~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  231 LLSGVPPFWGETEFEIFLAILRG-DFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             HhhCCCCCcCCChhHHHHHHHcC-CCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence            99999999999988888888765 6678888899999999999999999999999999999999998654

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=1.2e-25  Score=237.52  Aligned_cols=149  Identities=32%  Similarity=0.607  Sum_probs=136.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      +|+.|||+|||||+|++++.++   .+||.|||+|+.+.....+.++||||.|.|||++...+++..+|.|+||+++|||
T Consensus       536 LH~k~iIYRDLKPENllLd~~G---y~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~EL  612 (732)
T KOG0614|consen  536 LHRKGIIYRDLKPENLLLDNRG---YLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYEL  612 (732)
T ss_pred             HHhcCceeccCChhheeeccCC---ceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHH
Confidence            4778999999999999999988   6999999999999999999999999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccC-CCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~-~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~~~  154 (568)
                      ++|.+||.+.++..+++.|+++.. ..+|    ..+.....+||+++++.+|.+|+.     ..++.+|.||..+.|.-.
T Consensus       613 L~G~pPFs~~dpmktYn~ILkGid~i~~P----r~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdwegl  688 (732)
T KOG0614|consen  613 LTGSPPFSGVDPMKTYNLILKGIDKIEFP----RRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDWEGL  688 (732)
T ss_pred             HcCCCCCCCCchHHHHHHHHhhhhhhhcc----cccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCChhhh
Confidence            999999999999999999998763 3444    477889999999999999999986     789999999999988754


Q ss_pred             hh
Q 008370          155 AE  156 (568)
Q Consensus       155 ~~  156 (568)
                      ..
T Consensus       689 r~  690 (732)
T KOG0614|consen  689 RS  690 (732)
T ss_pred             hh
Confidence            43

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.92  E-value=1.1e-25  Score=244.90  Aligned_cols=149  Identities=27%  Similarity=0.493  Sum_probs=118.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+|||++.++.  .+||+|||+|+.+.........+||+.|+|||++.+ ..|+.++||||+||++|+
T Consensus       186 LH~~~IiHrDLKp~NILl~~~~~--~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~e  263 (440)
T PTZ00036        186 IHSKFICHRDLKPQNLLIDPNTH--TLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAE  263 (440)
T ss_pred             HHHCCEecCCcCHHHEEEcCCCC--ceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHH
Confidence            45679999999999999986542  699999999987765554556788999999999865 468999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhcc----------------CCCCCC--------CcccccCHHHHHHHHHhhccCCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTST----------------ELRFPP--------GAIEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~----------------~~~~p~--------~~~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      |++|.+||.+.+..+.+..+....                ...+|.        ..+...++++.+||.+||..||.+||
T Consensus       264 lltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~  343 (440)
T PTZ00036        264 MILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRL  343 (440)
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCc
Confidence            999999999987766655554311                011111        01223567899999999999999999


Q ss_pred             CHHHHHhchhHHHhHH
Q 008370          136 TFKEFFNHRFLGELRQ  151 (568)
Q Consensus       136 TaeElL~Hpff~~~~~  151 (568)
                      |+.|+++||||..++.
T Consensus       344 ta~e~l~hp~f~~~~~  359 (440)
T PTZ00036        344 NPIEALADPFFDDLRD  359 (440)
T ss_pred             CHHHHhCChhHHhhhc
Confidence            9999999999987754

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=99.92  E-value=2.1e-25  Score=229.10  Aligned_cols=149  Identities=33%  Similarity=0.532  Sum_probs=126.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~EL   80 (568)
                      |.++|+||||||+|||++.+.  +++||||||.|+.+..++...+...|.+|+|||.+.+ ..|+.+.||||.||++.||
T Consensus       142 h~~~IcHRDIKPqNlLvD~~t--g~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aEL  219 (364)
T KOG0658|consen  142 HSHGICHRDIKPQNLLVDPDT--GVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAEL  219 (364)
T ss_pred             HhcCcccCCCChheEEEcCCC--CeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHH
Confidence            557999999999999999874  4899999999999988887788888999999998866 5799999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhcc----------------CCCCC---CC-----cccccCHHHHHHHHHhhccCCCCCCC
Q 008370           81 VTGKPPFDGSNQLQLFQNILTST----------------ELRFP---PG-----AIEELHPDCVDLCRCLLRQNPVERIT  136 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~----------------~~~~p---~~-----~~~~ls~~~~dLI~~cL~~dP~~RpT  136 (568)
                      +.|++.|.|.+..+++..|++.-                ...+|   ..     .....+++..+|+.++|..+|.+|.+
T Consensus       220 l~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~  299 (364)
T KOG0658|consen  220 LKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLS  299 (364)
T ss_pred             hcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCC
Confidence            99999999998887776665321                01111   11     22456789999999999999999999


Q ss_pred             HHHHHhchhHHHhHHh
Q 008370          137 FKEFFNHRFLGELRQT  152 (568)
Q Consensus       137 aeElL~Hpff~~~~~~  152 (568)
                      +.|++.||||.+++..
T Consensus       300 ~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  300 ALEALAHPFFDELRDP  315 (364)
T ss_pred             HHHHhcchhhHHhhCc
Confidence            9999999999998765

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=7.8e-25  Score=226.21  Aligned_cols=143  Identities=31%  Similarity=0.637  Sum_probs=120.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.... .......+||+.|+|||++.+..++.++||||+||++|+
T Consensus       109 lH~~~i~HrDlkp~Nili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~e  185 (312)
T cd05585         109 LHKFNVIYRDLKPENILLDYQG---HIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYE  185 (312)
T ss_pred             HHhCCeEeCCCCHHHeEECCCC---cEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHH
Confidence            4567999999999999998876   699999999986432 233456789999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC---CHHHHHhchhHHHhHH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI---TFKEFFNHRFLGELRQ  151 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp---TaeElL~Hpff~~~~~  151 (568)
                      |++|+.||.+.+..+.+..+... ...+|    ..+++.+.+|+.+||..||.+||   ++.+++.||||....+
T Consensus       186 l~tg~~pf~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~  255 (312)
T cd05585         186 MLTGLPPFYDENVNEMYRKILQE-PLRFP----DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSW  255 (312)
T ss_pred             HHhCCCCcCCCCHHHHHHHHHcC-CCCCC----CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCH
Confidence            99999999988877777766643 33333    46788999999999999999997   5899999999987643

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=3.2e-25  Score=231.75  Aligned_cols=141  Identities=30%  Similarity=0.523  Sum_probs=121.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..+.+|||||+.|||+..++   .+||+|||++..+.... ...+++|||+|||||++.+..|+.++||||||++.+||
T Consensus       128 H~~~kiHrDIKaanil~s~~g---~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEl  204 (467)
T KOG0201|consen  128 HSEKKIHRDIKAANILLSESG---DVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIEL  204 (467)
T ss_pred             hhcceecccccccceeEeccC---cEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHH
Confidence            445899999999999999986   59999999998876543 34789999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      .+|.+||....+...+..|    ....||......++.+++|+..||.+||+.||++.++++|+|++..
T Consensus       205 a~GePP~s~~hPmrvlflI----pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a  269 (467)
T KOG0201|consen  205 AKGEPPHSKLHPMRVLFLI----PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRA  269 (467)
T ss_pred             hcCCCCCcccCcceEEEec----cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence            9999999988875444333    3344555555788999999999999999999999999999999763

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=6.1e-25  Score=224.57  Aligned_cols=142  Identities=30%  Similarity=0.594  Sum_probs=121.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.....  ....+|++.|+|||++.+..++.++|||||||++|+|
T Consensus       117 lH~~~i~H~dlkp~NIli~~~~---~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l  191 (291)
T cd05612         117 LHSKEIVYRDLKPENILLDKEG---HIKLTDFGFAKKLRDR--TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEM  191 (291)
T ss_pred             HHHCCeeecCCCHHHeEECCCC---CEEEEecCcchhccCC--cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHH
Confidence            4667999999999999998776   6999999999876432  2356799999999999998999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQT  152 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~  152 (568)
                      ++|+.||.+.+..+.+..+... ...+|    ..+++.+.+|+++||..||.+|++     ++++++||||..+.+.
T Consensus       192 ~~g~~pf~~~~~~~~~~~i~~~-~~~~~----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~~  263 (291)
T cd05612         192 LVGYPPFFDDNPFGIYEKILAG-KLEFP----RHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSVDWD  263 (291)
T ss_pred             HhCCCCCCCCCHHHHHHHHHhC-CcCCC----ccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCCCHH
Confidence            9999999998887777777654 33333    356889999999999999999995     9999999999876654

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.91  E-value=7.8e-25  Score=228.28  Aligned_cols=142  Identities=29%  Similarity=0.593  Sum_probs=121.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.....  ..+.+||+.|+|||++.+..++.++|||||||++|+|
T Consensus       134 LH~~~ivH~dlkp~NIll~~~~---~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  208 (329)
T PTZ00263        134 LHSKDIIYRDLKPENLLLDNKG---HVKVTDFGFAKKVPDR--TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEF  208 (329)
T ss_pred             HHHCCeeecCCCHHHEEECCCC---CEEEeeccCceEcCCC--cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHH
Confidence            3567999999999999999877   6999999999876433  2356899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQT  152 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~  152 (568)
                      ++|..||.+.+..+.+..+... ...+|    ..++..+.+|+.+||..||.+|++     +++++.||||....+.
T Consensus       209 ltg~~pf~~~~~~~~~~~i~~~-~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~~~~  280 (329)
T PTZ00263        209 IAGYPPFFDDTPFRIYEKILAG-RLKFP----NWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWD  280 (329)
T ss_pred             HcCCCCCCCCCHHHHHHHHhcC-CcCCC----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCCCHH
Confidence            9999999998887777777654 33333    346788999999999999999997     7999999999876554

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.91  E-value=7.2e-25  Score=221.89  Aligned_cols=143  Identities=26%  Similarity=0.444  Sum_probs=115.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++............|++.|+|||++.+..++.++||||+||++|+|
T Consensus       124 lH~~~ivH~dikp~Nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l  200 (288)
T cd07863         124 LHANCIVHRDLKPENILVTSGG---QVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM  200 (288)
T ss_pred             HHhCCeecCCCCHHHEEECCCC---CEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHH
Confidence            4567999999999999998876   6999999999876654444556789999999999888899999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCC----CCC------------------CCcccccCHHHHHHHHHhhccCCCCCCCHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTEL----RFP------------------PGAIEELHPDCVDLCRCLLRQNPVERITFK  138 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~----~~p------------------~~~~~~ls~~~~dLI~~cL~~dP~~RpTae  138 (568)
                      ++|++||.+....+.+.++......    .++                  ......++..+.+|+.+||+.||.+|||+.
T Consensus       201 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  280 (288)
T cd07863         201 FRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAF  280 (288)
T ss_pred             HhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHH
Confidence            9999999888766665555432100    000                  011124567889999999999999999999


Q ss_pred             HHHhchhH
Q 008370          139 EFFNHRFL  146 (568)
Q Consensus       139 ElL~Hpff  146 (568)
                      +++.||||
T Consensus       281 ~~l~hp~f  288 (288)
T cd07863         281 RALQHPFF  288 (288)
T ss_pred             HHhcCCCC
Confidence            99999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.91  E-value=6.3e-25  Score=228.10  Aligned_cols=144  Identities=30%  Similarity=0.602  Sum_probs=122.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++... ........+||+.|+|||++.+..++.++||||+||++|+
T Consensus       112 lH~~~ivH~dlkp~NIli~~~~---~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  188 (320)
T cd05590         112 LHDKGIIYRDLKLDNVLLDHEG---HCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYE  188 (320)
T ss_pred             HHHCCeEeCCCCHHHeEECCCC---cEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHH
Confidence            4567999999999999998877   69999999987643 2233445789999999999998899999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH------HHHHhchhHHHhHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF------KEFFNHRFLGELRQT  152 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa------eElL~Hpff~~~~~~  152 (568)
                      |++|+.||.+.+..+.+..+... ...+|    ..++.++.+|+.+||..||.+|+++      +++++||||..+.+.
T Consensus       189 l~~g~~Pf~~~~~~~~~~~i~~~-~~~~~----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~~  262 (320)
T cd05590         189 MLCGHAPFEAENEDDLFEAILND-EVVYP----TWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDWE  262 (320)
T ss_pred             HhhCCCCCCCCCHHHHHHHHhcC-CCCCC----CCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCHH
Confidence            99999999998888877777643 22333    3578899999999999999999998      999999999877654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.91  E-value=1.3e-24  Score=225.25  Aligned_cols=144  Identities=28%  Similarity=0.579  Sum_probs=119.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++... ........+||+.|+|||++.+..++.++||||+||++|+
T Consensus       112 lH~~~ivHrDlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e  188 (316)
T cd05620         112 LHSKGIIYRDLKLDNVMLDRDG---HIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYE  188 (316)
T ss_pred             HHHCCeEecCCCHHHeEECCCC---CEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHH
Confidence            3567999999999999999876   69999999987532 2233456789999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH-HHHHhchhHHHhHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF-KEFFNHRFLGELRQT  152 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa-eElL~Hpff~~~~~~  152 (568)
                      |++|+.||.+.+..+.+..+... ...+|    ..++.++.+|+.+||..||.+|+++ +++++||||....+.
T Consensus       189 l~~g~~Pf~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~~  257 (316)
T cd05620         189 MLIGQSPFHGDDEDELFESIRVD-TPHYP----RWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINWT  257 (316)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhC-CCCCC----CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCCHH
Confidence            99999999988877776665433 22233    3578899999999999999999997 589999999877654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.91  E-value=1.6e-24  Score=225.21  Aligned_cols=144  Identities=30%  Similarity=0.572  Sum_probs=121.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.... .......+||+.|+|||++.+..++.++|||||||++|+
T Consensus       116 lH~~~ivH~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  192 (323)
T cd05584         116 LHQQGIIYRDLKPENILLDAQG---HVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYD  192 (323)
T ss_pred             HHHCCeecCCCCHHHeEECCCC---CEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHH
Confidence            3567999999999999998876   799999999975432 233445689999999999998889999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQT  152 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~  152 (568)
                      |++|+.||.+.+....+..+... ...+|    ..+++.+.+|+.+||..+|.+||     ++++++.||||....+.
T Consensus       193 ll~G~~pf~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~~  265 (323)
T cd05584         193 MLTGAPPFTAENRKKTIDKILKG-KLNLP----PYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHVNWD  265 (323)
T ss_pred             HhcCCCCCCCCCHHHHHHHHHcC-CCCCC----CCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence            99999999998887777777654 33333    35688999999999999999999     89999999999776443

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=9.8e-25  Score=247.58  Aligned_cols=150  Identities=22%  Similarity=0.476  Sum_probs=129.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhc----c-CCCCcccchhhH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQ----N-HKYDAKADLWSV   73 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~----~-~~ys~ksDIWSl   73 (568)
                      +|.+|+|||||||+||||+..|   +|||+|||-|-.+..++  ...+.+|||-|++||++.    + +.|+..+|+||+
T Consensus       191 lH~mgyVHRDiKPDNvLld~~G---HikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSl  267 (1317)
T KOG0612|consen  191 LHSMGYVHRDIKPDNVLLDKSG---HIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSL  267 (1317)
T ss_pred             HHhccceeccCCcceeEecccC---cEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhh
Confidence            3678999999999999999988   89999999998776544  345678999999999995    3 568999999999


Q ss_pred             HHHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCCCCC---HHHHHhchhHHHh
Q 008370           74 GAILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT---FKEFFNHRFLGEL  149 (568)
Q Consensus        74 GviL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT---aeElL~Hpff~~~  149 (568)
                      ||++|||+.|..||......+++-+|+... .+.||...  .+++++++||.+++. +|+.|..   ++++..||||..+
T Consensus       268 GV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~--~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~  344 (1317)
T KOG0612|consen  268 GVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDET--DVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGI  344 (1317)
T ss_pred             HHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCccc--ccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCC
Confidence            999999999999999999999999998754 56777433  589999999999765 6788988   9999999999999


Q ss_pred             HHhhhhh
Q 008370          150 RQTVHAE  156 (568)
Q Consensus       150 ~~~~~~~  156 (568)
                      .|....+
T Consensus       345 ~W~~iR~  351 (1317)
T KOG0612|consen  345 DWDNIRE  351 (1317)
T ss_pred             Chhhhhh
Confidence            9864443

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.91  E-value=1.7e-24  Score=224.65  Aligned_cols=145  Identities=27%  Similarity=0.583  Sum_probs=123.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.... .......+||+.|+|||++.+..++.++||||+||++|+
T Consensus       112 LH~~~ivHrDikp~Nill~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e  188 (321)
T cd05591         112 LHRHGVIYRDLKLDNILLDAEG---HCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYE  188 (321)
T ss_pred             HHHCCeeccCCCHHHeEECCCC---CEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHH
Confidence            4567999999999999999877   799999999976432 233455789999999999999899999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-------CHHHHHhchhHHHhHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-------TFKEFFNHRFLGELRQT  152 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-------TaeElL~Hpff~~~~~~  152 (568)
                      |++|+.||.+.+..+.+..+... ...+|    ..++.++.+++.+||..||.+|+       +++++++||||....+.
T Consensus       189 l~tg~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~~  263 (321)
T cd05591         189 MMAGQPPFEADNEDDLFESILHD-DVLYP----VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEIDWV  263 (321)
T ss_pred             HhcCCCCCCCCCHHHHHHHHHcC-CCCCC----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCCHH
Confidence            99999999999888888777654 22333    25688999999999999999999       89999999999877655


Q ss_pred             h
Q 008370          153 V  153 (568)
Q Consensus       153 ~  153 (568)
                      .
T Consensus       264 ~  264 (321)
T cd05591         264 L  264 (321)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=99.91  E-value=4.7e-25  Score=230.76  Aligned_cols=153  Identities=23%  Similarity=0.414  Sum_probs=126.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||+-+||+|||||+|||+++.|   +|+|.|.|+|..+...+.....+||..|||||++....|+..+|+|++||++|||
T Consensus       303 lH~~~iVYRDLKPeNILLDd~G---hvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYem  379 (591)
T KOG0986|consen  303 LHRRRIVYRDLKPENILLDDHG---HVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEM  379 (591)
T ss_pred             HHhcceeeccCChhheeeccCC---CeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHH
Confidence            5677999999999999999888   7999999999999888888888999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHhhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQTVHA  155 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~~~~  155 (568)
                      +.|+.||...........+-+ .....+...++.+++++++|++.+|.+||.+|+.     ++++.+||||+.+.|....
T Consensus       380 i~G~sPFr~~KeKvk~eEvdr-r~~~~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rle  458 (591)
T KOG0986|consen  380 IAGHSPFRQRKEKVKREEVDR-RTLEDPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLE  458 (591)
T ss_pred             HcccCchhhhhhhhhHHHHHH-HHhcchhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCCHhHHh
Confidence            999999976543322221211 1122233445688999999999999999999985     5689999999999886544


Q ss_pred             hc
Q 008370          156 EQ  157 (568)
Q Consensus       156 ~~  157 (568)
                      ..
T Consensus       459 ag  460 (591)
T KOG0986|consen  459 AG  460 (591)
T ss_pred             cc
Confidence            43

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.91  E-value=1e-24  Score=226.45  Aligned_cols=145  Identities=26%  Similarity=0.556  Sum_probs=121.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.... .......+||+.|+|||++.+..++.++|||||||++|+
T Consensus       112 lH~~givH~dikp~NIll~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e  188 (323)
T cd05575         112 LHSLNIIYRDLKPENILLDSQG---HVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYE  188 (323)
T ss_pred             HHHCCeEeCCCCHHHeEECCCC---cEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhh
Confidence            3567999999999999998876   699999999976432 233445689999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH----HHHHhchhHHHhHHhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF----KEFFNHRFLGELRQTV  153 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa----eElL~Hpff~~~~~~~  153 (568)
                      |++|..||.+.+..+.+..+... ...++    ..+++.+.+++.+||+.||.+||++    .++++||||....+..
T Consensus       189 ll~g~~pf~~~~~~~~~~~i~~~-~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~~  261 (323)
T cd05575         189 MLYGLPPFYSRDTAEMYDNILNK-PLRLK----PNISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWDD  261 (323)
T ss_pred             hhcCCCCCCCCCHHHHHHHHHcC-CCCCC----CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHHH
Confidence            99999999998877777777654 22222    3568899999999999999999987    6999999998766543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.91  E-value=1.2e-24  Score=229.63  Aligned_cols=145  Identities=23%  Similarity=0.380  Sum_probs=116.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++............||+.|+|||++.+..++.++|||||||++|+|
T Consensus       142 LH~~~ivH~Dlkp~NIll~~~~---~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el  218 (364)
T cd07875         142 LHSAGIIHRDLKPSNIVVKSDC---TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM  218 (364)
T ss_pred             HhhCCeecCCCCHHHEEECCCC---cEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHH
Confidence            4667999999999999998876   6999999999876554445567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCC---------------------C----------------CCcccccCHHHHHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRF---------------------P----------------PGAIEELHPDCVDLC  123 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~---------------------p----------------~~~~~~ls~~~~dLI  123 (568)
                      ++|+.||.+.+..+.+.+++.....+.                     .                ..........+++|+
T Consensus       219 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll  298 (364)
T cd07875         219 IKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL  298 (364)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHH
Confidence            999999998877666655543211100                     0                000111245789999


Q ss_pred             HHhhccCCCCCCCHHHHHhchhHHH
Q 008370          124 RCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus       124 ~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      .+||+.||.+|||++++++||||..
T Consensus       299 ~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         299 SKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             HHhcCcCcccCCCHHHHhcCccccc
Confidence            9999999999999999999999964

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.91  E-value=1.2e-24  Score=228.52  Aligned_cols=146  Identities=25%  Similarity=0.410  Sum_probs=115.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++............||+.|+|||++.+..++.++|||||||++|+|
T Consensus       135 LH~~givHrDikp~Nill~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el  211 (355)
T cd07874         135 LHSAGIIHRDLKPSNIVVKSDC---TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM  211 (355)
T ss_pred             HHhCCcccCCCChHHEEECCCC---CEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHH
Confidence            4667999999999999998876   6999999999876555455567899999999999998999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCC--------------------------CCC-----------CCcccccCHHHHHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTEL--------------------------RFP-----------PGAIEELHPDCVDLC  123 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~--------------------------~~p-----------~~~~~~ls~~~~dLI  123 (568)
                      ++|+.||.+.+..+.+..++.....                          .++           ..........+.+|+
T Consensus       212 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  291 (355)
T cd07874         212 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL  291 (355)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHH
Confidence            9999999887655444333221000                          000           001112346789999


Q ss_pred             HHhhccCCCCCCCHHHHHhchhHHHh
Q 008370          124 RCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       124 ~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      .+||..||.+|||+.|+++||||...
T Consensus       292 ~~mL~~dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         292 SKMLVIDPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             HHHhcCCchhcCCHHHHhcCcchhcc
Confidence            99999999999999999999999644

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.91  E-value=8.5e-25  Score=228.05  Aligned_cols=144  Identities=27%  Similarity=0.604  Sum_probs=120.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.... .......+||+.|+|||++.+..++.++|||||||++|+
T Consensus       111 LH~~~ivHrDikp~NIll~~~~---~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e  187 (328)
T cd05593         111 LHSGKIVYRDLKLENLMLDKDG---HIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE  187 (328)
T ss_pred             HHhCCeEecccCHHHeEECCCC---cEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHH
Confidence            4667999999999999999876   699999999976432 233445789999999999998899999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQT  152 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~  152 (568)
                      |++|+.||.+.+..+....+... ...+|    ..+++++.+|+.+||..||.+|+     ++.++++||||....+.
T Consensus       188 lltG~~Pf~~~~~~~~~~~~~~~-~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~  260 (328)
T cd05593         188 MMCGRLPFYNQDHEKLFELILME-DIKFP----RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQ  260 (328)
T ss_pred             HhhCCCCCCCCCHHHHHHHhccC-CccCC----CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence            99999999988776666655432 33333    36788999999999999999997     89999999999876554

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.91  E-value=2.1e-24  Score=224.22  Aligned_cols=145  Identities=29%  Similarity=0.664  Sum_probs=121.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++... ........+||+.|+|||++.+..++.++||||+||++|+
T Consensus       117 lH~~~ivH~dlkp~Nill~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e  193 (324)
T cd05587         117 LHSKGIIYRDLKLDNVMLDAEG---HIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE  193 (324)
T ss_pred             HHHCCeEecCCCHHHeEEcCCC---CEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHH
Confidence            3567999999999999999876   69999999987532 2233445689999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH-----HHHHhchhHHHhHHhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF-----KEFFNHRFLGELRQTV  153 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa-----eElL~Hpff~~~~~~~  153 (568)
                      |++|+.||.+.+..+.+..+... ...+|    ..+++.+.+++.+||..||.+|++.     +++++||||....+..
T Consensus       194 lltG~~pf~~~~~~~~~~~i~~~-~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~~~  267 (324)
T cd05587         194 MLAGQPPFDGEDEDELFQSIMEH-NVSYP----KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRIDWEK  267 (324)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHcC-CCCCC----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCCCHHH
Confidence            99999999998887777777643 33333    3678899999999999999999976     8999999998876543

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.91  E-value=2.7e-24  Score=227.14  Aligned_cols=148  Identities=24%  Similarity=0.421  Sum_probs=119.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC------------------------------------CC
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD------------------------------------LA   44 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~------------------------------------~~   44 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.+....                                    ..
T Consensus       117 lH~~givHrDlKp~NILi~~~~---~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (363)
T cd05628         117 IHQLGFIHRDIKPDNLLLDSKG---HVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLA  193 (363)
T ss_pred             HHhCCeEecCCCHHHeEECCCC---CEEEeeccCcccccccccccccccccccccccccccccccccccchhhhcccccc
Confidence            4667999999999999998876   79999999987543210                                    11


Q ss_pred             ccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHH
Q 008370           45 DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLC  123 (568)
Q Consensus        45 ~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI  123 (568)
                      ...+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.+.++.... ...+|+.  ..+++++++|+
T Consensus       194 ~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~--~~~s~~~~~li  271 (363)
T cd05628         194 FSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPE--VPISEKAKDLI  271 (363)
T ss_pred             ccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCc--CCCCHHHHHHH
Confidence            24689999999999999999999999999999999999999999988888887776532 3344443  24688999999


Q ss_pred             HHhhccCCC---CCCCHHHHHhchhHHHhHHhhh
Q 008370          124 RCLLRQNPV---ERITFKEFFNHRFLGELRQTVH  154 (568)
Q Consensus       124 ~~cL~~dP~---~RpTaeElL~Hpff~~~~~~~~  154 (568)
                      .+|+. +|.   .||+++|+++||||....+...
T Consensus       272 ~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~~~~~  304 (363)
T cd05628         272 LRFCC-EWEHRIGAPGVEEIKTNPFFEGVDWEHI  304 (363)
T ss_pred             HHHcC-ChhhcCCCCCHHHHhCCCCCCCCCHHHH
Confidence            98765 444   4689999999999988876644

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>PTZ00284 protein kinase; Provisional

Probab=99.91  E-value=5.7e-25  Score=240.50  Aligned_cols=147  Identities=19%  Similarity=0.324  Sum_probs=111.7

Q ss_pred             CC-CCeEecCCCCCCeEEecCCC-------------CCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcc
Q 008370            2 CY-VFMIVSANACQNLLVSTNEV-------------TPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK   67 (568)
Q Consensus         2 ~~-~~IIHrDLKP~NILL~~~~~-------------~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~k   67 (568)
                      |. .|||||||||+|||++.++.             ...+||+|||++....  ......+||+.|+|||++.+..|+.+
T Consensus       248 H~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~~~  325 (467)
T PTZ00284        248 HTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWMYS  325 (467)
T ss_pred             HhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCc--cccccccCCccccCcHHhhcCCCCcH
Confidence            44 59999999999999987642             1249999999886432  22345789999999999999999999


Q ss_pred             cchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCC-----------------------Cc-------------
Q 008370           68 ADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPP-----------------------GA-------------  111 (568)
Q Consensus        68 sDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~-----------------------~~-------------  111 (568)
                      +|||||||++|||++|++||.+.+..+.+..+.... ..+|.                       ..             
T Consensus       326 ~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  404 (467)
T PTZ00284        326 TDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTL-GRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARP  404 (467)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc-CCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccc
Confidence            999999999999999999999877665544332210 00000                       00             


Q ss_pred             c--cccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370          112 I--EELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       112 ~--~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      .  ....+.+.+||.+||++||.+|||++|+++||||.....
T Consensus       405 ~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~  446 (467)
T PTZ00284        405 VREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYP  446 (467)
T ss_pred             hhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCC
Confidence            0  001355779999999999999999999999999976543

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.1e-24  Score=220.19  Aligned_cols=157  Identities=30%  Similarity=0.637  Sum_probs=134.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceec-CCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l-~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |.-+||+||||.+|+|+++++   +|||+|||+++.- .......++||||.|+|||++....|+..+|+|.+||++|||
T Consensus       285 Hs~~ivYRDlKLENLlLDkDG---HIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEM  361 (516)
T KOG0690|consen  285 HSRNIVYRDLKLENLLLDKDG---HIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEM  361 (516)
T ss_pred             hhCCeeeeechhhhheeccCC---ceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHH
Confidence            556899999999999999998   8999999999863 445577899999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHhhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQTVHA  155 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~~~~  155 (568)
                      ++|+.||...++..++..|+.. ...||.    .++++++.|+..+|.+||.+|+     .+.|+++|+||..+.|....
T Consensus       362 mCGRLPFyn~dh~kLFeLIl~e-d~kFPr----~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~W~~~~  436 (516)
T KOG0690|consen  362 MCGRLPFYNKDHEKLFELILME-DLKFPR----TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVDWEATY  436 (516)
T ss_pred             HhccCcccccchhHHHHHHHhh-hccCCc----cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCCHHHHH
Confidence            9999999999988888877654 566664    7899999999999999999998     47899999999999987654


Q ss_pred             hccCCCCCCchh
Q 008370          156 EQHSVVPETKPM  167 (568)
Q Consensus       156 ~~~~~~p~~~~~  167 (568)
                      ... ..|...|.
T Consensus       437 ~Kk-i~PPfKPq  447 (516)
T KOG0690|consen  437 RKK-IEPPFKPQ  447 (516)
T ss_pred             Hhc-cCCCCCCC
Confidence            433 33344433

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.91  E-value=9.8e-25  Score=221.10  Aligned_cols=143  Identities=32%  Similarity=0.509  Sum_probs=112.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++......  ......|++.|+|||++.+..++.++|+||+||++|
T Consensus       116 lH~~~i~H~dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~  192 (287)
T cd07848         116 CHKNDIVHRDIKPENLLISHND---VLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILG  192 (287)
T ss_pred             HHHCCeecCCCCHHHEEEcCCC---cEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHH
Confidence            4567999999999999998776   79999999998764322  233467899999999999888999999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccC------------------CCCCCC---------cccccCHHHHHHHHHhhccCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTE------------------LRFPPG---------AIEELHPDCVDLCRCLLRQNP  131 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~------------------~~~p~~---------~~~~ls~~~~dLI~~cL~~dP  131 (568)
                      +|++|++||.+.+..+....+.....                  ..++..         ....++..+.+||++||+.||
T Consensus       193 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P  272 (287)
T cd07848         193 ELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNP  272 (287)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCc
Confidence            99999999998765544333322100                  001100         012357789999999999999


Q ss_pred             CCCCCHHHHHhchhH
Q 008370          132 VERITFKEFFNHRFL  146 (568)
Q Consensus       132 ~~RpTaeElL~Hpff  146 (568)
                      ++|||++++++||||
T Consensus       273 ~~R~s~~~~l~hp~f  287 (287)
T cd07848         273 TDRYLTEQCLNHPAF  287 (287)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.91  E-value=1.1e-24  Score=226.27  Aligned_cols=146  Identities=26%  Similarity=0.592  Sum_probs=123.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.... .......+||+.|+|||++.+..++.++|||||||++|+
T Consensus       117 LH~~~ivHrDlkp~Nill~~~~---~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e  193 (323)
T cd05616         117 LHSKGIIYRDLKLDNVMLDSEG---HIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE  193 (323)
T ss_pred             HHHCCEEecCCCHHHeEECCCC---cEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHH
Confidence            3567999999999999999877   799999999986432 233456789999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHhhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~~~  154 (568)
                      |++|+.||.+.+..+.+..+... ...+|    ..++.++.+++.+||+.+|.+|++     ..++++||||..+.+...
T Consensus       194 lltg~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~~~~  268 (323)
T cd05616         194 MLAGQAPFEGEDEDELFQSIMEH-NVAYP----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKL  268 (323)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhC-CCCCC----CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCCCHHHH
Confidence            99999999998888777777654 33333    357889999999999999999997     489999999987766543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.91  E-value=2.7e-24  Score=222.98  Aligned_cols=145  Identities=28%  Similarity=0.592  Sum_probs=120.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.... .......+||+.|+|||++.+..++.++|||||||++|+
T Consensus       112 LH~~~ivH~dlkp~Nill~~~~---~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e  188 (316)
T cd05592         112 LHKKGIIYRDLKLDNVLLDKDG---HIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYE  188 (316)
T ss_pred             HHHCCEEeCCCCHHHeEECCCC---CEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHH
Confidence            4567999999999999998876   699999999986532 234456789999999999998899999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH-HHHHhchhHHHhHHhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF-KEFFNHRFLGELRQTV  153 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa-eElL~Hpff~~~~~~~  153 (568)
                      |++|+.||.+.+..+.+..+... ...+|    ..++.++.+|+.+||..+|.+||++ .++++||||....+..
T Consensus       189 ll~G~~Pf~~~~~~~~~~~i~~~-~~~~~----~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~  258 (316)
T cd05592         189 MLIGQSPFHGEDEDELFDSILND-RPHFP----RWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDWER  258 (316)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHcC-CCCCC----CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCCHHH
Confidence            99999999998887777666532 22222    3578899999999999999999986 5888999998776543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=99.91  E-value=1.1e-24  Score=226.52  Aligned_cols=149  Identities=25%  Similarity=0.476  Sum_probs=128.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC---------------------------------C-C-----
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP---------------------------------Q-D-----   42 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~---------------------------------~-~-----   42 (568)
                      |-+|||+|||||+||||-++|   +|.|.||-++.....                                 . .     
T Consensus       196 HmlGivYRDLKPENILvredG---HIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~  272 (459)
T KOG0610|consen  196 HMLGIVYRDLKPENILVREDG---HIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKK  272 (459)
T ss_pred             HhhceeeccCCcceeEEecCC---cEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccc
Confidence            557999999999999999988   899999998643210                                 0 0     


Q ss_pred             ------------------CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccC
Q 008370           43 ------------------LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTE  104 (568)
Q Consensus        43 ------------------~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~  104 (568)
                                        ....++||-.|+|||++.+.+++..+|+|.|||++|||+.|..||.|.+..+++.+|+.. .
T Consensus       273 ~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~-~  351 (459)
T KOG0610|consen  273 DESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQ-P  351 (459)
T ss_pred             cccccccchhhhcCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcC-C
Confidence                              112367999999999999999999999999999999999999999999999999999865 5


Q ss_pred             CCCCCCcccccCHHHHHHHHHhhccCCCCCCC----HHHHHhchhHHHhHHhhhhh
Q 008370          105 LRFPPGAIEELHPDCVDLCRCLLRQNPVERIT----FKEFFNHRFLGELRQTVHAE  156 (568)
Q Consensus       105 ~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT----aeElL~Hpff~~~~~~~~~~  156 (568)
                      +.||...  .++..++|||+++|.+||.+|+.    +.||.+||||+.++|.+...
T Consensus       352 l~Fp~~~--~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~  405 (459)
T KOG0610|consen  352 LKFPEEP--EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRC  405 (459)
T ss_pred             CcCCCCC--cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheec
Confidence            6666543  67899999999999999999998    99999999999999985443

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.91  E-value=9.5e-25  Score=229.41  Aligned_cols=142  Identities=30%  Similarity=0.597  Sum_probs=121.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.....  ..+.+||+.|+|||++.+..++.++|+||+||++|+|+
T Consensus       148 H~~~ivHrDLkp~NILl~~~~---~ikL~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell  222 (340)
T PTZ00426        148 QSLNIVYRDLKPENLLLDKDG---FIKMTDFGFAKVVDTR--TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEIL  222 (340)
T ss_pred             HHCCeEccCCCHHHEEECCCC---CEEEecCCCCeecCCC--cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHh
Confidence            557999999999999998776   7999999999876432  34578999999999999888999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHhh
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQTV  153 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~~  153 (568)
                      +|..||.+.+....+..+... ...+|    ..+++.+.+++++||..+|.+|+     +++++++||||..+.+..
T Consensus       223 ~G~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~~  294 (340)
T PTZ00426        223 VGCPPFYANEPLLIYQKILEG-IIYFP----KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNIDWVS  294 (340)
T ss_pred             cCCCCCCCCCHHHHHHHHhcC-CCCCC----CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCCCHHH
Confidence            999999998887777777654 33333    35678999999999999999995     899999999998776543

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.91  E-value=1.5e-24  Score=225.44  Aligned_cols=141  Identities=29%  Similarity=0.658  Sum_probs=118.9

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHh
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT   82 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELlt   82 (568)
                      .||+||||||+|||++.++   .+||+|||+++.... .......+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus       115 ~~ivHrDikp~NIll~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~t  191 (325)
T cd05594         115 KNVVYRDLKLENLMLDKDG---HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC  191 (325)
T ss_pred             CCEEecCCCCCeEEECCCC---CEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeecc
Confidence            6999999999999999877   699999999976432 233445689999999999998899999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHh
Q 008370           83 GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQT  152 (568)
Q Consensus        83 G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~  152 (568)
                      |+.||.+.+.......+... ...+|    ..+++++.+|+.+||+.||++|+     ++.++++||||....+.
T Consensus       192 G~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~  261 (325)
T cd05594         192 GRLPFYNQDHEKLFELILME-EIRFP----RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQ  261 (325)
T ss_pred             CCCCCCCCCHHHHHHHHhcC-CCCCC----CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHH
Confidence            99999988877666655432 33333    35788999999999999999997     89999999999876554

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=1.4e-24  Score=227.22  Aligned_cols=148  Identities=24%  Similarity=0.427  Sum_probs=121.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----C-CccccCCCcccChhhhc--cCCCCcccchhhHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----L-ADTLCGSPLYMAPEIIQ--NHKYDAKADLWSVG   74 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~-~~t~~GT~~YmAPEvl~--~~~ys~ksDIWSlG   74 (568)
                      |..|.||||||+.||||+.+|   .|||+|||....+-...    . ..+++||++|||||++.  ..+|+.|+||||||
T Consensus       143 H~~G~IHRdvKAgnILi~~dG---~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfG  219 (516)
T KOG0582|consen  143 HQNGHIHRDVKAGNILIDSDG---TVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFG  219 (516)
T ss_pred             HhcCceecccccccEEEcCCC---cEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhh
Confidence            566999999999999999988   79999999987654322    1 16779999999999964  45899999999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCC-----CCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTEL-----RFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~-----~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++..||.+|..||....+.+.+-.-+++..+     .++.+....++..++.++..||++||.+|||++++++|+||+..
T Consensus       220 ITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~  299 (516)
T KOG0582|consen  220 ITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA  299 (516)
T ss_pred             HHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence            9999999999999998888877655555433     12222334556789999999999999999999999999999877


Q ss_pred             HHh
Q 008370          150 RQT  152 (568)
Q Consensus       150 ~~~  152 (568)
                      +..
T Consensus       300 k~~  302 (516)
T KOG0582|consen  300 KSK  302 (516)
T ss_pred             cch
Confidence            543

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.91  E-value=1.7e-24  Score=227.95  Aligned_cols=146  Identities=25%  Similarity=0.426  Sum_probs=115.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++............||+.|+|||++.+..++.++||||+||++|+|
T Consensus       139 LH~~~ivHrDlkp~NIl~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el  215 (359)
T cd07876         139 LHSAGIIHRDLKPSNIVVKSDC---TLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL  215 (359)
T ss_pred             HHhCCcccCCCCHHHEEECCCC---CEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHH
Confidence            4667999999999999999877   7999999999876554445567889999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhcc---------------------CCCCCC----------------CcccccCHHHHHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTST---------------------ELRFPP----------------GAIEELHPDCVDLC  123 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~---------------------~~~~p~----------------~~~~~ls~~~~dLI  123 (568)
                      ++|+.||.+.+....+..+....                     ....+.                ......++.+.+|+
T Consensus       216 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  295 (359)
T cd07876         216 VKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLL  295 (359)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHH
Confidence            99999998876544433222110                     001100                01112356789999


Q ss_pred             HHhhccCCCCCCCHHHHHhchhHHHh
Q 008370          124 RCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       124 ~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      .+||..||.+|||+.|+++||||...
T Consensus       296 ~~mL~~dP~~R~t~~e~l~hp~~~~~  321 (359)
T cd07876         296 SKMLVIDPDKRISVDEALRHPYITVW  321 (359)
T ss_pred             HHHhccCcccCCCHHHHhcCchhhhh
Confidence            99999999999999999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.91  E-value=1.6e-24  Score=224.53  Aligned_cols=145  Identities=28%  Similarity=0.572  Sum_probs=120.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++... ........+||+.|+|||++.+..++.++|||||||++|+
T Consensus       112 lH~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  188 (321)
T cd05603         112 LHSLNIIYRDLKPENILLDSQG---HVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYE  188 (321)
T ss_pred             HHHCCeEeccCCHHHeEECCCC---CEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhh
Confidence            4567999999999999999877   69999999987632 2333455789999999999998899999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH----HHHHhchhHHHhHHhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF----KEFFNHRFLGELRQTV  153 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa----eElL~Hpff~~~~~~~  153 (568)
                      |++|..||.+.+..+.+..+... ...+|    ...+..+.+++.+||+.+|.+|+++    .++++|+||..+.+..
T Consensus       189 l~~g~~pf~~~~~~~~~~~i~~~-~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~~  261 (321)
T cd05603         189 MLYGLPPFYSRDVSQMYDNILHK-PLQLP----GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWDD  261 (321)
T ss_pred             hhcCCCCCCCCCHHHHHHHHhcC-CCCCC----CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHHH
Confidence            99999999998877777666543 33333    3567889999999999999999865    5999999998766543

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.91  E-value=1e-24  Score=222.45  Aligned_cols=143  Identities=27%  Similarity=0.449  Sum_probs=112.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~   78 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++..... .......|++.|+|||++.+ ..++.++||||+||++|
T Consensus       119 LH~~~ivH~dlkp~Nil~~~~~---~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~  195 (288)
T cd07871         119 CHKRKILHRDLKPQNLLINEKG---ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILY  195 (288)
T ss_pred             HHhCCcccCCCCHHHEEECCCC---CEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHH
Confidence            4667999999999999998876   6999999999865432 22344678999999999865 56889999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCC------------------CCCC-------CcccccCHHHHHHHHHhhccCCCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTEL------------------RFPP-------GAIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~------------------~~p~-------~~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      +|++|++||.+.+..+.+..+......                  .++.       .....++.++++|+.+||..||.+
T Consensus       196 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~  275 (288)
T cd07871         196 EMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKS  275 (288)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCccc
Confidence            999999999988766655544322110                  0110       011245778999999999999999


Q ss_pred             CCCHHHHHhchhH
Q 008370          134 RITFKEFFNHRFL  146 (568)
Q Consensus       134 RpTaeElL~Hpff  146 (568)
                      |||++|+++||||
T Consensus       276 R~t~~~~l~hp~f  288 (288)
T cd07871         276 RISAEAALRHSYF  288 (288)
T ss_pred             CCCHHHHhcCCCC
Confidence            9999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.91  E-value=1.7e-24  Score=225.12  Aligned_cols=145  Identities=29%  Similarity=0.630  Sum_probs=121.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.... .......+||+.|+|||++.+..++.++|||||||++|+
T Consensus       111 LH~~~ivH~Dlkp~NIll~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~e  187 (323)
T cd05595         111 LHSRDVVYRDIKLENLMLDKDG---HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE  187 (323)
T ss_pred             HHHCCeEecCCCHHHEEEcCCC---CEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHH
Confidence            4667999999999999998876   699999999876432 223345789999999999998899999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQTV  153 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~~  153 (568)
                      |++|+.||.+.+.......+... ...+|    ..+++++.+|+.+||..||.+|+     ++.++++|+||....+..
T Consensus       188 ll~g~~Pf~~~~~~~~~~~~~~~-~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~  261 (323)
T cd05595         188 MMCGRLPFYNQDHERLFELILME-EIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQD  261 (323)
T ss_pred             HHhCCCCCCCCCHHHHHHHHhcC-CCCCC----CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHH
Confidence            99999999988777766665533 33333    36789999999999999999998     899999999998766543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.91  E-value=3.4e-24  Score=222.55  Aligned_cols=144  Identities=27%  Similarity=0.631  Sum_probs=121.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.... .......+|++.|+|||++.+..++.++|||||||++|+
T Consensus       117 lH~~~ivHrdlkp~Nill~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~e  193 (324)
T cd05589         117 LHENKIVYRDLKLDNLLLDTEG---FVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYE  193 (324)
T ss_pred             HHhCCeEecCCCHHHeEECCCC---cEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHH
Confidence            4567999999999999999877   699999999875432 233456789999999999999899999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQT  152 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~  152 (568)
                      |++|+.||.+.+..+.+..+... ...+|    ..+++.+.+++.+||..||.+||     ++.++++||||..+.+.
T Consensus       194 l~~G~~pf~~~~~~~~~~~i~~~-~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~~  266 (324)
T cd05589         194 MLVGESPFPGDDEEEVFDSIVND-EVRYP----RFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDINWD  266 (324)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhC-CCCCC----CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCCCHH
Confidence            99999999998887777766654 23333    35788999999999999999999     79999999999876544

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=99.91  E-value=1.2e-24  Score=237.07  Aligned_cols=146  Identities=32%  Similarity=0.455  Sum_probs=118.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      +-.+|||+||||+||||...+. ..|||+|||.+......-.  +.+.+..|+|||++.+.+|+.+.||||||||+.||+
T Consensus       306 ~~l~IIHcDLKPENILL~~~~r-~~vKVIDFGSSc~~~q~vy--tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~  382 (586)
T KOG0667|consen  306 HELGIIHCDLKPENILLKDPKR-SRIKVIDFGSSCFESQRVY--TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELF  382 (586)
T ss_pred             HhCCeeeccCChhheeeccCCc-CceeEEecccccccCCcce--eeeeccccccchhhccCCCCCccceeehhhhHHhHh
Confidence            4469999999999999987664 4899999999987654333  788999999999999999999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCC---------------------------------------------------CCCCC
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTEL---------------------------------------------------RFPPG  110 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~---------------------------------------------------~~p~~  110 (568)
                      +|.+.|.|.+..+++..|+.-...                                                   ..|+.
T Consensus       383 tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~  462 (586)
T KOG0667|consen  383 TGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPG  462 (586)
T ss_pred             cCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCC
Confidence            999999999999988887642100                                                   00000


Q ss_pred             cc------c-ccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370          111 AI------E-ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus       111 ~~------~-~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ..      . .-...+.+|+++||.+||.+|+|..++++||||....
T Consensus       463 ~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~  509 (586)
T KOG0667|consen  463 SRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTS  509 (586)
T ss_pred             CcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccccc
Confidence            00      0 1123578999999999999999999999999997543

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.91  E-value=7.4e-25  Score=230.54  Aligned_cols=143  Identities=31%  Similarity=0.563  Sum_probs=121.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC------CCCccccCCCcccChhhhccC---CC-Ccccch
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ------DLADTLCGSPLYMAPEIIQNH---KY-DAKADL   70 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~------~~~~t~~GT~~YmAPEvl~~~---~y-s~ksDI   70 (568)
                      +||-|||||||||.|+||+.++   +|||+|||.+......      ......+|||.|+|||.+.+.   .| +.+.||
T Consensus       226 LH~QgiiHRDIKPsNLLl~~~g---~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~Di  302 (576)
T KOG0585|consen  226 LHYQGIIHRDIKPSNLLLSSDG---TVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDI  302 (576)
T ss_pred             HHhcCeeccccchhheEEcCCC---cEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhh
Confidence            5788999999999999999987   8999999998765221      223346899999999998762   33 456899


Q ss_pred             hhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           71 WSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        71 WSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ||+||+||.|+.|+.||.+....+++.+|+.. .+.+|..  ..+.+++++||++||.+||.+|++..+|..|||...-
T Consensus       303 WalGVTLYCllfG~~PF~~~~~~~l~~KIvn~-pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  303 WALGVTLYCLLFGQLPFFDDFELELFDKIVND-PLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             hhhhhhHHHhhhccCCcccchHHHHHHHHhcC-cccCCCc--ccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence            99999999999999999999999999999865 5556643  2678999999999999999999999999999998654

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.91  E-value=1.5e-24  Score=224.91  Aligned_cols=148  Identities=26%  Similarity=0.411  Sum_probs=112.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhcc--CCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQN--HKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~--~~ys~ksDIWSlG   74 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++......    .....+||+.|+|||++.+  ..++.++||||||
T Consensus       119 LH~~~ivH~dlkp~NIll~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlG  195 (338)
T cd07859         119 IHTANVFHRDLKPKNILANADC---KLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIG  195 (338)
T ss_pred             HHHCCeecCCCCHHHeEECCCC---cEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHH
Confidence            4567999999999999998877   79999999998643221    2234679999999999865  6789999999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhc-----------------------cCCCCCC---CcccccCHHHHHHHHHhhc
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTS-----------------------TELRFPP---GAIEELHPDCVDLCRCLLR  128 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~-----------------------~~~~~p~---~~~~~ls~~~~dLI~~cL~  128 (568)
                      |++|+|++|++||.+.+....+..+...                       .....+.   ......++.+.+++.+||.
T Consensus       196 vvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  275 (338)
T cd07859         196 CIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLA  275 (338)
T ss_pred             HHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcC
Confidence            9999999999999876644332221110                       0000000   1112456788999999999


Q ss_pred             cCCCCCCCHHHHHhchhHHHhHH
Q 008370          129 QNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       129 ~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      .||.+||+++|+++||||..+..
T Consensus       276 ~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         276 FDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             cCcccCCCHHHHhcCchhhhcCc
Confidence            99999999999999999976543

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.91  E-value=3.1e-24  Score=222.55  Aligned_cols=145  Identities=29%  Similarity=0.611  Sum_probs=121.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++... ........+|++.|+|||++.+..++.++|+|||||++|+
T Consensus       112 LH~~~ivH~dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~  188 (318)
T cd05570         112 LHERGIIYRDLKLDNVLLDSEG---HIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYE  188 (318)
T ss_pred             HHhCCeEccCCCHHHeEECCCC---cEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHH
Confidence            3567999999999999999877   69999999997632 2233445689999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH-----HHHHhchhHHHhHHhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF-----KEFFNHRFLGELRQTV  153 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa-----eElL~Hpff~~~~~~~  153 (568)
                      |++|+.||.+.+..+....+... ...+|    ..++..+.+|+++||..||.+||++     .+++.||||....+..
T Consensus       189 l~~G~~pf~~~~~~~~~~~i~~~-~~~~~----~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~~  262 (318)
T cd05570         189 MLAGQSPFEGDDEDELFQSILED-EVRYP----RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWDK  262 (318)
T ss_pred             HhhCCCCCCCCCHHHHHHHHHcC-CCCCC----CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHHH
Confidence            99999999988877777666543 33333    3578899999999999999999999     9999999998876543

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.6e-24  Score=225.72  Aligned_cols=147  Identities=27%  Similarity=0.498  Sum_probs=120.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++....  .....+||+.|+|||++.+..++.++|||||||++|+|
T Consensus       117 lH~~~ivH~dlkp~Nil~~~~~---~~kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el  191 (333)
T cd05600         117 LHELGYIHRDLKPENFLIDASG---HIKLTDFGLSKGIVT--YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEF  191 (333)
T ss_pred             HHHCCccccCCCHHHEEECCCC---CEEEEeCcCCccccc--ccCCcccCccccChhHhcCCCCCCccceecchHHHhhh
Confidence            3567999999999999998876   799999999986543  34567899999999999988999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCC-CCCC--CcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTEL-RFPP--GAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~-~~p~--~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      ++|..||.+.+..+.+..+...... ..|.  .....++.++.+|+.+||..+|.+||+++++++||||....+.
T Consensus       192 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~~~~  266 (333)
T cd05600         192 LCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEVDWN  266 (333)
T ss_pred             hhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCCCHH
Confidence            9999999998877776666543211 1111  1112568899999999999999999999999999999876543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.3e-24  Score=225.04  Aligned_cols=147  Identities=29%  Similarity=0.604  Sum_probs=121.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC------------------------------CCccccCC
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD------------------------------LADTLCGS   50 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~------------------------------~~~t~~GT   50 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++......                              ......||
T Consensus       117 LH~~giiH~Dlkp~NIll~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt  193 (350)
T cd05573         117 VHKLGFIHRDIKPDNILIDADG---HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGT  193 (350)
T ss_pred             HHHCCeeccCCCHHHeEECCCC---CEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccC
Confidence            4567999999999999999877   69999999998654332                              23346799


Q ss_pred             CcccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhcc
Q 008370           51 PLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQ  129 (568)
Q Consensus        51 ~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~  129 (568)
                      +.|+|||++.+..++.++|||||||++|+|++|+.||.+.+......++.... ...+|..  ..+++++.+||.+||. 
T Consensus       194 ~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~--~~~~~~~~~li~~ll~-  270 (350)
T cd05573         194 PDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPD--PPVSPEAIDLICRLLC-  270 (350)
T ss_pred             ccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCC--CCCCHHHHHHHHHHcc-
Confidence            99999999999999999999999999999999999999988777777666522 2233332  2368999999999997 


Q ss_pred             CCCCCCC-HHHHHhchhHHHhHHhh
Q 008370          130 NPVERIT-FKEFFNHRFLGELRQTV  153 (568)
Q Consensus       130 dP~~RpT-aeElL~Hpff~~~~~~~  153 (568)
                      +|.+|++ ++++++||||..+.+..
T Consensus       271 dp~~R~~s~~~ll~hp~~~~~~~~~  295 (350)
T cd05573         271 DPEDRLGSFEEIKSHPFFKGIDWEN  295 (350)
T ss_pred             ChhhcCCCHHHHhcCCCcCCCCHHH
Confidence            9999999 99999999998776543

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.91  E-value=3.2e-24  Score=228.27  Aligned_cols=145  Identities=31%  Similarity=0.577  Sum_probs=131.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+|||||+.||++++++   .|||+|||+|+.+.... ...+++|||.||+||++.+.+|+.|+|||||||++||
T Consensus       122 lH~~~iLHRDlK~~Nifltk~~---~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yE  198 (426)
T KOG0589|consen  122 LHENRVLHRDLKCANIFLTKDK---KVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYE  198 (426)
T ss_pred             HHhhhhhcccchhhhhhccccC---ceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHH
Confidence            4566899999999999999988   57999999999988776 8889999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      |++-+++|.+.+...+..+|......+.|    ...+.+++.+++.||..+|..||++.+++.+|.+......
T Consensus       199 m~~lk~aF~a~~m~~Li~ki~~~~~~Plp----~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~~~~  267 (426)
T KOG0589|consen  199 MCTLKPAFKASNMSELILKINRGLYSPLP----SMYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRYLVE  267 (426)
T ss_pred             HHhcccccCccchHHHHHHHhhccCCCCC----ccccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhHHHh
Confidence            99999999999999999999877644444    3668899999999999999999999999999998776643

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=99.91  E-value=3e-24  Score=220.33  Aligned_cols=147  Identities=30%  Similarity=0.527  Sum_probs=121.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccC-CCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+||||+.++   .+||+|||+|+... +...+...++|.+|.|||++.+. .|+..+||||+||++.|
T Consensus       137 H~~~IlHRDLKPQNlLi~~~G---~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaE  213 (323)
T KOG0594|consen  137 HSHGILHRDLKPQNLLISSSG---VLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAE  213 (323)
T ss_pred             HhCCeecccCCcceEEECCCC---cEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHH
Confidence            567999999999999999977   79999999999776 44456778899999999999776 79999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccC----C-------------CCCCC--------cccccCHHHHHHHHHhhccCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTE----L-------------RFPPG--------AIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~----~-------------~~p~~--------~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      |+++++.|.|....+++.+|..-..    .             .++..        ......++..+++.+||+.+|.+|
T Consensus       214 m~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R  293 (323)
T KOG0594|consen  214 MFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKR  293 (323)
T ss_pred             HHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccC
Confidence            9999999999998888777754211    1             11111        012233588999999999999999


Q ss_pred             CCHHHHHhchhHHHhHH
Q 008370          135 ITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       135 pTaeElL~Hpff~~~~~  151 (568)
                      .++..++.||||.....
T Consensus       294 ~Sa~~al~h~yf~~~~~  310 (323)
T KOG0594|consen  294 ISAKGALTHPYFSELPE  310 (323)
T ss_pred             cCHHHHhcChhhccccc
Confidence            99999999999987643

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.91  E-value=1.7e-24  Score=225.26  Aligned_cols=144  Identities=27%  Similarity=0.499  Sum_probs=113.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccC-CCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL   77 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++......  .....+||+.|+|||++.+. .++.++|||||||++
T Consensus       121 lH~~~ivHrDlkp~Nili~~~~---~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il  197 (332)
T cd05614         121 LHKLGIVYRDIKLENILLDSEG---HVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILI  197 (332)
T ss_pred             HHHCCcEecCCCHHHeEECCCC---CEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhh
Confidence            4667999999999999999876   69999999998654322  23356899999999999765 478899999999999


Q ss_pred             HHHHhCCCCCCCCc----HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHH
Q 008370           78 FQLVTGKPPFDGSN----QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGE  148 (568)
Q Consensus        78 ~ELltG~~PF~g~~----~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~  148 (568)
                      |+|++|+.||....    .......+.. ....    .+..+++.+.+|+.+||..||++||     +++++++||||..
T Consensus       198 ~elltg~~pf~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~  272 (332)
T cd05614         198 FELLTGASPFTLEGERNTQSEVSRRILK-CDPP----FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG  272 (332)
T ss_pred             hhhhcCCCCCCCCCCCCCHHHHHHHHhc-CCCC----CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            99999999997532    2222233332 2222    2346788999999999999999999     8899999999987


Q ss_pred             hHHh
Q 008370          149 LRQT  152 (568)
Q Consensus       149 ~~~~  152 (568)
                      ..+.
T Consensus       273 ~~~~  276 (332)
T cd05614         273 LDWE  276 (332)
T ss_pred             CCHH
Confidence            6544

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.91  E-value=4e-24  Score=221.28  Aligned_cols=147  Identities=29%  Similarity=0.631  Sum_probs=130.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceec-CCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l-~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      +|..|||+||||.+||+++.++   +|||+|||+++.- .....+.++||||.|+|||++.+++|+..+|+|++||+|||
T Consensus       466 Lh~kgIiYRDLKLDNvmLd~eG---HiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyE  542 (683)
T KOG0696|consen  466 LHSKGIIYRDLKLDNVMLDSEG---HIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYE  542 (683)
T ss_pred             hhcCCeeeeeccccceEeccCC---ceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHH
Confidence            3567999999999999999988   8999999999863 34556789999999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH-----HHHHhchhHHHhHHhhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF-----KEFFNHRFLGELRQTVH  154 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa-----eElL~Hpff~~~~~~~~  154 (568)
                      |+.|++||.|++..++++.|.... ..+|    ..++.++.++++.+|.+.|.+|+.+     +++..||||+.+.|...
T Consensus       543 mlaGQpPFdGeDE~elF~aI~ehn-vsyP----KslSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iDWek~  617 (683)
T KOG0696|consen  543 MLAGQPPFDGEDEDELFQAIMEHN-VSYP----KSLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRIDWEKL  617 (683)
T ss_pred             HHcCCCCCCCCCHHHHHHHHHHcc-CcCc----ccccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhccHHHH
Confidence            999999999999999999998753 3334    4789999999999999999999865     57999999999998754


Q ss_pred             h
Q 008370          155 A  155 (568)
Q Consensus       155 ~  155 (568)
                      .
T Consensus       618 E  618 (683)
T KOG0696|consen  618 E  618 (683)
T ss_pred             h
Confidence            3

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.90  E-value=2.3e-24  Score=223.98  Aligned_cols=146  Identities=26%  Similarity=0.544  Sum_probs=119.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhc------cCCCCcccchhh
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQ------NHKYDAKADLWS   72 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~------~~~ys~ksDIWS   72 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.+.....  ....+||+.|+|||++.      ...++.++||||
T Consensus       118 lH~~~i~H~Dlkp~NIll~~~~---~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diws  194 (330)
T cd05601         118 VHQMGYVHRDIKPENVLIDRTG---HIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWS  194 (330)
T ss_pred             HHHCCeEcccCchHheEECCCC---CEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeec
Confidence            3567999999999999999876   699999999987654332  23457999999999986      456788999999


Q ss_pred             HHHHHHHHHhCCCCCCCCcHHHHHHHHHhccC-CCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           73 VGAILFQLVTGKPPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        73 lGviL~ELltG~~PF~g~~~~~~~~~Il~~~~-~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      |||++|+|++|+.||.+.+....+.++..... ..+|.  ...+++.+.+|+.+||. +|.+||++++++.||||..+.+
T Consensus       195 lG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~~~  271 (330)
T cd05601         195 LGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPE--DPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKIDW  271 (330)
T ss_pred             ccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCC--CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCCCH
Confidence            99999999999999998887777777765432 22332  12578899999999998 9999999999999999987665


Q ss_pred             h
Q 008370          152 T  152 (568)
Q Consensus       152 ~  152 (568)
                      .
T Consensus       272 ~  272 (330)
T cd05601         272 N  272 (330)
T ss_pred             H
Confidence            4

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.90  E-value=7.4e-24  Score=224.54  Aligned_cols=133  Identities=27%  Similarity=0.460  Sum_probs=111.9

Q ss_pred             CCC-eEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhc--cCCCCcccchhhHHHHHH
Q 008370            3 YVF-MIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQ--NHKYDAKADLWSVGAILF   78 (568)
Q Consensus         3 ~~~-IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~--~~~ys~ksDIWSlGviL~   78 (568)
                      ..+ ||||||||+|||++.++  .++||+|||+++..... .......||+.|||||++.  ...|+.|+||||||+++|
T Consensus       160 ~~~~iIHrDLK~~NiLv~~~~--~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlW  237 (362)
T KOG0192|consen  160 SEGPIIHRDLKSDNILVDLKG--KTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLW  237 (362)
T ss_pred             cCCCeeecccChhhEEEcCCC--CEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHH
Confidence            346 99999999999999875  37999999999887654 2333478999999999999  569999999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      ||+||+.||.+....+....+.... .+.+|    ...++.+..||.+||..||..||++.+++
T Consensus       238 El~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p----~~~~~~l~~l~~~CW~~dp~~RP~f~ei~  297 (362)
T KOG0192|consen  238 ELLTGEIPFEDLAPVQVASAVVVGGLRPPIP----KECPPHLSSLMERCWLVDPSRRPSFLEIV  297 (362)
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHhcCCCCCCC----ccCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence            9999999999998877666665443 33333    34789999999999999999999999985

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.90  E-value=5.6e-24  Score=221.81  Aligned_cols=146  Identities=25%  Similarity=0.591  Sum_probs=115.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceec-CCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l-~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.. .........+||+.|+|||++.+..++.++|+||+||++|+
T Consensus       112 lH~~~ivH~dlkp~Nili~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~e  188 (329)
T cd05588         112 LHERGIIYRDLKLDNVLLDAEG---HIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFE  188 (329)
T ss_pred             HHHCCeEecCCCHHHeEECCCC---CEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHH
Confidence            3567999999999999998876   6999999999753 23334456789999999999999999999999999999999


Q ss_pred             HHhCCCCCCCC--------cHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC------HHHHHhchh
Q 008370           80 LVTGKPPFDGS--------NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT------FKEFFNHRF  145 (568)
Q Consensus        80 LltG~~PF~g~--------~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT------aeElL~Hpf  145 (568)
                      |++|+.||...        ...+............+|    ..++..+.+++++||..||.+|++      ++++++|||
T Consensus       189 l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~  264 (329)
T cd05588         189 MMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPF  264 (329)
T ss_pred             HHHCCCCcccccccccccccchHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCC
Confidence            99999999632        111222222222333333    357889999999999999999987      789999999


Q ss_pred             HHHhHHhh
Q 008370          146 LGELRQTV  153 (568)
Q Consensus       146 f~~~~~~~  153 (568)
                      |..+.+..
T Consensus       265 ~~~~~~~~  272 (329)
T cd05588         265 FRNIDWDL  272 (329)
T ss_pred             CCCCCHHH
Confidence            98766554

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=5.5e-24  Score=224.10  Aligned_cols=147  Identities=28%  Similarity=0.527  Sum_probs=119.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--------------------------------------
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--------------------------------------   42 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--------------------------------------   42 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.+....                                      
T Consensus       117 lH~~~ivH~Dlkp~NIl~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (364)
T cd05599         117 IHKLGYIHRDIKPDNLLLDAKG---HIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRR  193 (364)
T ss_pred             HHHCCeEeccCCHHHeEECCCC---CEEEeecccceeccccccccccccccccccccccccccccccccccccchhhccc
Confidence            4567999999999999999877   79999999987643211                                      


Q ss_pred             -CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHH
Q 008370           43 -LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCV  120 (568)
Q Consensus        43 -~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~  120 (568)
                       .....+||+.|+|||++....++.++|||||||++|+|++|..||.+.+..+.+..+.... ...+|..  ..+++.+.
T Consensus       194 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~--~~~s~~~~  271 (364)
T cd05599         194 ALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDE--VPLSPEAK  271 (364)
T ss_pred             ccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCC--CCCCHHHH
Confidence             1123579999999999999999999999999999999999999999988877777776532 2233332  25688999


Q ss_pred             HHHHHhhccCCCCCCC---HHHHHhchhHHHhHHhh
Q 008370          121 DLCRCLLRQNPVERIT---FKEFFNHRFLGELRQTV  153 (568)
Q Consensus       121 dLI~~cL~~dP~~RpT---aeElL~Hpff~~~~~~~  153 (568)
                      +||.+||. +|.+|++   +++++.||||....+..
T Consensus       272 ~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~~~~  306 (364)
T cd05599         272 DLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVDWEH  306 (364)
T ss_pred             HHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCCHHH
Confidence            99999996 9999998   99999999998876543

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.90  E-value=6.7e-24  Score=234.36  Aligned_cols=144  Identities=31%  Similarity=0.594  Sum_probs=122.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---CCCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.+...   ....+.+||+.|+|||++.+..|+.++|||||||++
T Consensus       159 lH~~~IiHrDLKP~NILl~~~~---~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvil  235 (496)
T PTZ00283        159 VHSKHMIHRDIKSANILLCSNG---LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLL  235 (496)
T ss_pred             HHhCCEecCCCCHHHEEEeCCC---CEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHH
Confidence            3567999999999999999876   7999999999875432   234567899999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      |+|++|+.||.+.+..+.+..+.......+|    ..+++++.+++.+||..+|.+||++.++++|||+.....
T Consensus       236 yeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~~~  305 (496)
T PTZ00283        236 YELLTLKRPFDGENMEEVMHKTLAGRYDPLP----PSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLFIS  305 (496)
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHhhh
Confidence            9999999999998887777777654333333    367889999999999999999999999999999876543

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.90  E-value=3.1e-24  Score=220.19  Aligned_cols=148  Identities=23%  Similarity=0.433  Sum_probs=110.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++..... ......+|++.|+|||++.+ ..++.++||||+||++|
T Consensus       119 lH~~~ivH~dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~  195 (303)
T cd07869         119 IHQRYILHRDLKPQNLLISDTG---ELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFV  195 (303)
T ss_pred             HHHCCeecCCCCHHHEEECCCC---CEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHH
Confidence            4567999999999999998876   6999999999765422 23345678999999999865 45788899999999999


Q ss_pred             HHHhCCCCCCCCcHH-HHHHHHHhccCC-------------CCCCCc--------------ccccCHHHHHHHHHhhccC
Q 008370           79 QLVTGKPPFDGSNQL-QLFQNILTSTEL-------------RFPPGA--------------IEELHPDCVDLCRCLLRQN  130 (568)
Q Consensus        79 ELltG~~PF~g~~~~-~~~~~Il~~~~~-------------~~p~~~--------------~~~ls~~~~dLI~~cL~~d  130 (568)
                      +|++|..||.+.... +.+..+......             .+.+..              ....+..+.+|+.+||+.|
T Consensus       196 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d  275 (303)
T cd07869         196 EMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCF  275 (303)
T ss_pred             HHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccC
Confidence            999999999875432 222222211000             000000              0013467889999999999


Q ss_pred             CCCCCCHHHHHhchhHHHhHH
Q 008370          131 PVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       131 P~~RpTaeElL~Hpff~~~~~  151 (568)
                      |.+|||++|+++||||..+..
T Consensus       276 p~~R~s~~~~l~h~~f~~~~~  296 (303)
T cd07869         276 PKNRLSAQAALSHEYFSDLPP  296 (303)
T ss_pred             chhccCHHHHhcCcccccCCh
Confidence            999999999999999987654

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.90  E-value=4.9e-24  Score=216.51  Aligned_cols=148  Identities=21%  Similarity=0.421  Sum_probs=115.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.+.... ......||+.|+|||++.+..++.++|+|||||++|+
T Consensus       113 lH~~~i~H~dlkp~Nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~e  189 (280)
T cd05608         113 LHQRRIIYRDLKPENVLLDNDG---NVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYE  189 (280)
T ss_pred             HHHCCcccCCCCHHHEEECCCC---CEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHH
Confidence            4567999999999999998766   69999999998764332 2345679999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQT  152 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~  152 (568)
                      |++|+.||...........+... ....+...+..+++.+.+++.+||+.||.+||     +++++++||||+...+.
T Consensus       190 l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~  266 (280)
T cd05608         190 MIAARGPFRARGEKVENKELKQR-ILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLNWR  266 (280)
T ss_pred             HHhCCCCCCCCCcchhHHHHHHh-hcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcCCHh
Confidence            99999999865432111111111 11111223346788999999999999999999     88999999999886554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.90  E-value=6.9e-24  Score=221.30  Aligned_cols=146  Identities=25%  Similarity=0.580  Sum_probs=114.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++... ........+||+.|+|||++.+..++.++|+|||||++|+|
T Consensus       113 H~~~ivH~Dikp~Nili~~~~---~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  189 (329)
T cd05618         113 HERGIIYRDLKLDNVLLDSEG---HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM  189 (329)
T ss_pred             HHCCeeeCCCCHHHEEECCCC---CEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHH
Confidence            557999999999999999877   69999999997642 22334567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCC--------cHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC------HHHHHhchhH
Q 008370           81 VTGKPPFDGS--------NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT------FKEFFNHRFL  146 (568)
Q Consensus        81 ltG~~PF~g~--------~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT------aeElL~Hpff  146 (568)
                      ++|+.||...        ................+|    ..++..+.+|+.+||..||.+|++      ++++++||||
T Consensus       190 ~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p----~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f  265 (329)
T cd05618         190 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF  265 (329)
T ss_pred             hhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC----CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCC
Confidence            9999999521        111222222222233333    367889999999999999999998      5899999999


Q ss_pred             HHhHHhhh
Q 008370          147 GELRQTVH  154 (568)
Q Consensus       147 ~~~~~~~~  154 (568)
                      ....+...
T Consensus       266 ~~~~~~~~  273 (329)
T cd05618         266 RNVDWDLM  273 (329)
T ss_pred             CCCCHHHH
Confidence            87765533

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.90  E-value=5.4e-24  Score=215.87  Aligned_cols=144  Identities=22%  Similarity=0.475  Sum_probs=114.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+||+++.++   .+||+|||++.............|++.|+|||++.+..++.++|+||+||++|+|
T Consensus       111 lH~~~ivH~dikp~Nili~~~~---~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el  187 (277)
T cd05607         111 LHSMDIVYRDMKPENVLLDDQG---NCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEM  187 (277)
T ss_pred             HHHCCEEEccCChHhEEEcCCC---CEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHH
Confidence            3567999999999999998876   6999999999876554444456789999999999888899999999999999999


Q ss_pred             HhCCCCCCCCcHH----HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH----HHHHhchhHHHhHH
Q 008370           81 VTGKPPFDGSNQL----QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF----KEFFNHRFLGELRQ  151 (568)
Q Consensus        81 ltG~~PF~g~~~~----~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa----eElL~Hpff~~~~~  151 (568)
                      ++|+.||.+....    +........ ...+   ....++.++.+|+.+||+.||.+||++    ++++.|+||..+.+
T Consensus       188 ~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~~  262 (277)
T cd05607         188 VAGRTPFKDHKEKVAKEELKRRTLED-EVKF---EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINF  262 (277)
T ss_pred             HhCCCCCCCCcchhhHHHHHHHhhcc-cccc---ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCCH
Confidence            9999999764322    222222221 1111   123578899999999999999999999    67889999987644

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.90  E-value=3e-24  Score=229.45  Aligned_cols=133  Identities=29%  Similarity=0.538  Sum_probs=114.6

Q ss_pred             CCCC---CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccC--CCcccChhhhccCCCCcccchhhHHH
Q 008370            1 MCYV---FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCG--SPLYMAPEIIQNHKYDAKADLWSVGA   75 (568)
Q Consensus         1 m~~~---~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~G--T~~YmAPEvl~~~~ys~ksDIWSlGv   75 (568)
                      |+|+   ++|||||.++||||+.+.   ++||+|||+||...++.......|  ...|.|||.+...+|+.++|||||||
T Consensus       316 M~YLes~~~IHRDLAARNiLV~~~~---~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGV  392 (468)
T KOG0197|consen  316 MAYLESKNYIHRDLAARNILVDEDL---VVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGV  392 (468)
T ss_pred             HHHHHhCCccchhhhhhheeeccCc---eEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhh
Confidence            6665   899999999999999887   899999999996554443322222  23599999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHH
Q 008370           76 ILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF  140 (568)
Q Consensus        76 iL~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeEl  140 (568)
                      +||||+| |+.||.+....+.+..+.++.+++-|+    .+++.+.++|+.||+.+|++||||+.+
T Consensus       393 lL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~----~CP~~vY~lM~~CW~~~P~~RPtF~~L  454 (468)
T KOG0197|consen  393 LLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPE----GCPDEVYELMKSCWHEDPEDRPTFETL  454 (468)
T ss_pred             hHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCC----CCCHHHHHHHHHHhhCCcccCCCHHHH
Confidence            9999999 999999999999999998877766554    578889999999999999999999965

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.90  E-value=7.6e-25  Score=233.65  Aligned_cols=134  Identities=25%  Similarity=0.493  Sum_probs=114.1

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhC
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG   83 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG   83 (568)
                      .+|||||||.-||||+.++   +|||+|||-++..........++||..|||||++...+.+.|+|||||||+||||+||
T Consensus       231 hKIIHRDLKSPNiLIs~~d---~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~  307 (904)
T KOG4721|consen  231 HKIIHRDLKSPNILISYDD---VVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTG  307 (904)
T ss_pred             hhHhhhccCCCceEeeccc---eEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhc
Confidence            4899999999999999988   8999999999887766666789999999999999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           84 KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        84 ~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ..||...+...++..+-.+ .+.+|  .+..++..++-||++||...|..||+|.+++.|
T Consensus       308 EiPYkdVdssAIIwGVGsN-sL~Lp--vPstcP~GfklL~Kqcw~sKpRNRPSFrqil~H  364 (904)
T KOG4721|consen  308 EIPYKDVDSSAIIWGVGSN-SLHLP--VPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLH  364 (904)
T ss_pred             CCCccccchheeEEeccCC-ccccc--CcccCchHHHHHHHHHHhcCCCCCccHHHHHHH
Confidence            9999877665544333221 22222  334678889999999999999999999999888

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.90  E-value=4.7e-24  Score=219.73  Aligned_cols=146  Identities=23%  Similarity=0.395  Sum_probs=105.8

Q ss_pred             CCCCCeEecCCCCCCeEEecC-CCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhcc-CCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTN-EVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~-~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlG   74 (568)
                      ||..||+||||||+|||+..+ ...+.+||+|||+++......    .....+||+.|+|||++.+ ..++.++||||+|
T Consensus       124 LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG  203 (317)
T cd07868         124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIG  203 (317)
T ss_pred             HHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHH
Confidence            356799999999999999643 223479999999998764321    2345678999999999876 4588999999999


Q ss_pred             HHHHHHHhCCCCCCCCcH---------HHHHHHHHhccCCC----------CC-----------------------CCcc
Q 008370           75 AILFQLVTGKPPFDGSNQ---------LQLFQNILTSTELR----------FP-----------------------PGAI  112 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~---------~~~~~~Il~~~~~~----------~p-----------------------~~~~  112 (568)
                      |++|+|++|++||.+...         ...+..+......+          .+                       ....
T Consensus       204 ~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (317)
T cd07868         204 CIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHK  283 (317)
T ss_pred             HHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcC
Confidence            999999999999975331         11222221110000          00                       0000


Q ss_pred             cccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370          113 EELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus       113 ~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      ...+..+.+||.+||+.||.+|||++|+++||||
T Consensus       284 ~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         284 VKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             CCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            1224568899999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.90  E-value=5.8e-24  Score=220.66  Aligned_cols=145  Identities=29%  Similarity=0.575  Sum_probs=120.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.... .......+||+.|+|||++.+..++.++||||+||++|+
T Consensus       112 LH~~~ivHrdikp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e  188 (316)
T cd05619         112 LHSKGIVYRDLKLDNILLDTDG---HIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYE  188 (316)
T ss_pred             HHhCCeEeCCCCHHHEEECCCC---CEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHH
Confidence            3567999999999999999876   699999999976432 223445689999999999999899999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHH-HHHhchhHHHhHHhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFK-EFFNHRFLGELRQTV  153 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTae-ElL~Hpff~~~~~~~  153 (568)
                      |++|+.||.+.+..+.+..+... ...+|    ..++.++.+++.+||..+|.+|+++. ++++||||..+.+..
T Consensus       189 l~~G~~pf~~~~~~~~~~~i~~~-~~~~~----~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~  258 (316)
T cd05619         189 MLIGQSPFHGHDEEELFQSIRMD-NPCYP----RWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDWSA  258 (316)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhC-CCCCC----ccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCHHH
Confidence            99999999988877776665433 22233    35678999999999999999999996 899999998876543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.90  E-value=1.3e-23  Score=230.95  Aligned_cols=145  Identities=30%  Similarity=0.589  Sum_probs=123.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.+....   .....+||+.|+|||++.+..++.++|||||||++
T Consensus       185 lH~~~ivHrDlkp~NIll~~~~---~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l  261 (478)
T PTZ00267        185 VHSRKMMHRDLKSANIFLMPTG---IIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVIL  261 (478)
T ss_pred             HHhCCEEECCcCHHhEEECCCC---cEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHH
Confidence            4567999999999999999876   79999999998765332   24457899999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      |+|++|+.||.+.+..+.+..+.......++    ..++.++.++|.+||..+|++||++++++.|+|+......
T Consensus       262 ~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~----~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~~~~~  332 (478)
T PTZ00267        262 YELLTLHRPFKGPSQREIMQQVLYGKYDPFP----CPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKYVANL  332 (478)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC----ccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHHHHHH
Confidence            9999999999998887777777655333332    3567899999999999999999999999999999776543

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.90  E-value=1.1e-23  Score=223.68  Aligned_cols=147  Identities=27%  Similarity=0.499  Sum_probs=121.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccC----CCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNH----KYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~----~ys~ksDIWSlG   74 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++......  .....+||+.|+|||++...    .++.++||||||
T Consensus       158 LH~~~ivHrDLkp~NILl~~~~---~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlG  234 (370)
T cd05596         158 IHSMGFIHRDVKPDNMLLDKSG---HLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG  234 (370)
T ss_pred             HHHCCeeccCCCHHHEEEcCCC---CEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehh
Confidence            4567999999999999999877   79999999998765332  23457899999999998653    478899999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCC--CCCHHHHHhchhHHHhHH
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVE--RITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~--RpTaeElL~Hpff~~~~~  151 (568)
                      |++|+|++|+.||.+.+....+.++.... ...+|..  ..++.++.+||.+||..+|.+  |++++++++||||....+
T Consensus       235 vilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~--~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~~~  312 (370)
T cd05596         235 VFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDD--IEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKNDQW  312 (370)
T ss_pred             HHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCc--CCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCCCh
Confidence            99999999999999988887777776542 2333332  257899999999999999987  999999999999987554


Q ss_pred             h
Q 008370          152 T  152 (568)
Q Consensus       152 ~  152 (568)
                      .
T Consensus       313 ~  313 (370)
T cd05596         313 T  313 (370)
T ss_pred             h
Confidence            4

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.90  E-value=1.1e-23  Score=219.41  Aligned_cols=147  Identities=25%  Similarity=0.563  Sum_probs=117.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++... ........+||+.|+|||++.+..++.++|||||||++|+
T Consensus       112 lH~~~ivHrDlkp~Nili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e  188 (327)
T cd05617         112 LHERGIIYRDLKLDNVLLDADG---HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFE  188 (327)
T ss_pred             HHHCCeeccCCCHHHEEEeCCC---CEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHH
Confidence            3567999999999999999877   69999999997632 2334456789999999999999999999999999999999


Q ss_pred             HHhCCCCCCCC------cHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC------HHHHHhchhHH
Q 008370           80 LVTGKPPFDGS------NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT------FKEFFNHRFLG  147 (568)
Q Consensus        80 LltG~~PF~g~------~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT------aeElL~Hpff~  147 (568)
                      |++|..||...      +..+............+|    ..++..+.+++.+||..||.+|++      ++++++||||.
T Consensus       189 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~  264 (327)
T cd05617         189 MMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP----RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFR  264 (327)
T ss_pred             HHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCC
Confidence            99999999632      122222233322233333    357889999999999999999997      57999999999


Q ss_pred             HhHHhhh
Q 008370          148 ELRQTVH  154 (568)
Q Consensus       148 ~~~~~~~  154 (568)
                      .+.+...
T Consensus       265 ~~~~~~~  271 (327)
T cd05617         265 SIDWDLL  271 (327)
T ss_pred             CCCHHHH
Confidence            8876644

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=4e-24  Score=222.44  Aligned_cols=145  Identities=25%  Similarity=0.554  Sum_probs=119.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccC-CCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++... ........+||+.|+|||++.+. .++.++||||+||++|
T Consensus       112 LH~~~ivHrDlkp~Nili~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~  188 (330)
T cd05586         112 LHKYDIVYRDLKPENILLDATG---HIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVF  188 (330)
T ss_pred             HHHCCeEeccCCHHHeEECCCC---CEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEE
Confidence            4567999999999999999876   69999999997543 23344567899999999998754 5889999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC----CHHHHHhchhHHHhHHh
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI----TFKEFFNHRFLGELRQT  152 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp----TaeElL~Hpff~~~~~~  152 (568)
                      +|++|+.||.+.+..+.+..+... ...++.   ..+++++.+|+++||..||.+||    +++++++||||....+.
T Consensus       189 elltG~~Pf~~~~~~~~~~~i~~~-~~~~~~---~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~  262 (330)
T cd05586         189 EMCCGWSPFYAEDTQQMYRNIAFG-KVRFPK---NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWD  262 (330)
T ss_pred             EeccCCCCCCCCCHHHHHHHHHcC-CCCCCC---ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHH
Confidence            999999999998877777666543 333433   24688999999999999999998    79999999999876544

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.90  E-value=4.9e-24  Score=221.52  Aligned_cols=144  Identities=27%  Similarity=0.547  Sum_probs=120.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.... .......+||+.|+|||++.+..++.++||||+||++|+
T Consensus       112 lH~~givH~Dlkp~NIll~~~~---~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~e  188 (325)
T cd05604         112 LHSINIVYRDLKPENILLDSQG---HVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYE  188 (325)
T ss_pred             HHHCCeeecCCCHHHeEECCCC---CEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehh
Confidence            4567999999999999999877   699999999975432 233445789999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH----HHHHhchhHHHhHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF----KEFFNHRFLGELRQT  152 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa----eElL~Hpff~~~~~~  152 (568)
                      |++|..||.+.+..+.+..+.... ..+++    ..+..+.+++++||..+|.+||++    .+++.||||....+.
T Consensus       189 l~~G~~pf~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~  260 (325)
T cd05604         189 MLYGLPPFYCRDVAEMYDNILHKP-LVLRP----GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWT  260 (325)
T ss_pred             hhcCCCCCCCCCHHHHHHHHHcCC-ccCCC----CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHH
Confidence            999999999988877777776542 22222    467889999999999999999976    589999999876554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.90  E-value=3.1e-24  Score=226.24  Aligned_cols=148  Identities=26%  Similarity=0.483  Sum_probs=120.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC------------------------------------CC
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD------------------------------------LA   44 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~------------------------------------~~   44 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.+....                                    ..
T Consensus       117 lH~~givHrDLkp~NIli~~~~---~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (360)
T cd05627         117 IHQLGFIHRDIKPDNLLLDAKG---HVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLA  193 (360)
T ss_pred             HHHCCeEccCCCHHHEEECCCC---CEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccc
Confidence            4667999999999999998876   79999999987542110                                    11


Q ss_pred             ccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHH
Q 008370           45 DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLC  123 (568)
Q Consensus        45 ~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI  123 (568)
                      ...+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+....+.++.... ...+|+.  ..+++++++||
T Consensus       194 ~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~--~~~s~~~~~li  271 (360)
T cd05627         194 YSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPE--VPISEKAKDLI  271 (360)
T ss_pred             cccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCC--CCCCHHHHHHH
Confidence            24579999999999999999999999999999999999999999988888777776532 2334432  24688999999


Q ss_pred             HHhhccCCCCCC---CHHHHHhchhHHHhHHhhh
Q 008370          124 RCLLRQNPVERI---TFKEFFNHRFLGELRQTVH  154 (568)
Q Consensus       124 ~~cL~~dP~~Rp---TaeElL~Hpff~~~~~~~~  154 (568)
                      .+|+ .+|.+|+   +++++++||||..+.+...
T Consensus       272 ~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~~~  304 (360)
T cd05627         272 LRFC-TDSENRIGSNGVEEIKSHPFFEGVDWGHI  304 (360)
T ss_pred             HHhc-cChhhcCCCCCHHHHhcCCCCCCCCHHHH
Confidence            9977 4999998   5899999999998876543

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.90  E-value=7.1e-24  Score=220.31  Aligned_cols=144  Identities=26%  Similarity=0.576  Sum_probs=120.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++... ........+||+.|+|||++.+..++.++||||+||++|+
T Consensus       112 lH~~giiHrDlkp~Nili~~~~---~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  188 (325)
T cd05602         112 LHSLNIVYRDLKPENILLDSQG---HIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYE  188 (325)
T ss_pred             HHHCCeEecCCCHHHeEECCCC---CEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHH
Confidence            4667999999999999998876   69999999997643 2333456789999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHH----HHHhchhHHHhHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFK----EFFNHRFLGELRQT  152 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTae----ElL~Hpff~~~~~~  152 (568)
                      |++|..||.+.+..+.+..+... ...++    ..++..+.+++.+||+.+|.+|+++.    ++++|+||....+.
T Consensus       189 l~~g~~pf~~~~~~~~~~~i~~~-~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~  260 (325)
T cd05602         189 MLYGLPPFYSRNTAEMYDNILNK-PLQLK----PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWD  260 (325)
T ss_pred             HhcCCCCCCCCCHHHHHHHHHhC-CcCCC----CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHH
Confidence            99999999998887777766543 22222    36788999999999999999999865    89999999776554

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=99.90  E-value=7.4e-24  Score=215.20  Aligned_cols=148  Identities=29%  Similarity=0.488  Sum_probs=120.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~   78 (568)
                      ||...|+|||||++|+|++..|   .+||+|||+||.+... ..+...+-|.+|.|||++.+ ..|++.+|+||+|||+.
T Consensus       193 lH~~wilHRDLK~SNLLm~~~G---~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~a  269 (419)
T KOG0663|consen  193 LHDNWILHRDLKTSNLLLSHKG---ILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFA  269 (419)
T ss_pred             HhhceeEecccchhheeeccCC---cEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHH
Confidence            5677899999999999999887   7999999999988654 34556678999999999876 47999999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccC------------------CCCCCCc-------cc--ccCHHHHHHHHHhhccCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTE------------------LRFPPGA-------IE--ELHPDCVDLCRCLLRQNP  131 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~------------------~~~p~~~-------~~--~ls~~~~dLI~~cL~~dP  131 (568)
                      ||+++++.|.|....+++.+|...-.                  ..++...       +.  .++....+|+..+|..||
T Consensus       270 E~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP  349 (419)
T KOG0663|consen  270 ELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDP  349 (419)
T ss_pred             HHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCc
Confidence            99999999999998888887764211                  1111100       00  144778899999999999


Q ss_pred             CCCCCHHHHHhchhHHHhHH
Q 008370          132 VERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       132 ~~RpTaeElL~Hpff~~~~~  151 (568)
                      .+|.|++|.|+|.||.+...
T Consensus       350 ~kR~tA~~~L~h~~F~e~P~  369 (419)
T KOG0663|consen  350 GKRITAEDGLKHEYFRETPL  369 (419)
T ss_pred             cccccHHHhhcccccccCCC
Confidence            99999999999999977543

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=99.90  E-value=1.2e-23  Score=208.38  Aligned_cols=144  Identities=27%  Similarity=0.483  Sum_probs=118.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC-CccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~-~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      |...|+||||||.|+|++.++   ++||+|||+|+.+..... ....+-|.+|.|||++.+ ..|+..+|+||+||++.|
T Consensus       118 H~~~IlHRDlKPnNLLis~~g---~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AE  194 (318)
T KOG0659|consen  118 HSKWILHRDLKPNNLLISSDG---QLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAE  194 (318)
T ss_pred             HhhhhhcccCCccceEEcCCC---cEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHH
Confidence            445799999999999999988   799999999998875432 333477999999998865 579999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCC-------------------CCC----CcccccCHHHHHHHHHhhccCCCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELR-------------------FPP----GAIEELHPDCVDLCRCLLRQNPVERIT  136 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~-------------------~p~----~~~~~ls~~~~dLI~~cL~~dP~~RpT  136 (568)
                      |+.|.+-|.|.++.+++..|...-..+                   +|.    ......+.++.||+.+||..||.+|++
T Consensus       195 Lllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rit  274 (318)
T KOG0659|consen  195 LLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRIT  274 (318)
T ss_pred             HHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhccc
Confidence            999999999999999888776531111                   111    122344678899999999999999999


Q ss_pred             HHHHHhchhHHH
Q 008370          137 FKEFFNHRFLGE  148 (568)
Q Consensus       137 aeElL~Hpff~~  148 (568)
                      +.|+++|+||..
T Consensus       275 a~qaL~~~yf~~  286 (318)
T KOG0659|consen  275 ASQALKHPYFKS  286 (318)
T ss_pred             HHHHhcchhhhc
Confidence            999999999965

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=8.3e-24  Score=206.76  Aligned_cols=140  Identities=29%  Similarity=0.588  Sum_probs=125.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..++|||||||+|+|++..+   .+||+|||.+..-. .....+.|||..|.+||.+.+..++..+|+|++|++.||+
T Consensus       140 ~h~k~VIhRdiKpenlLlg~~~---~lkiAdfGwsV~~p-~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yef  215 (281)
T KOG0580|consen  140 CHLKRVIHRDIKPENLLLGSAG---ELKIADFGWSVHAP-SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEF  215 (281)
T ss_pred             hccCCcccCCCCHHHhccCCCC---CeeccCCCceeecC-CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHH
Confidence            4567999999999999999887   69999999987654 5567789999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +.|.+||......+++.+|.+. ...+|    ..++.++.|||.+||..+|.+|.+..|++.|||+...
T Consensus       216 lvg~ppFes~~~~etYkrI~k~-~~~~p----~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  216 LVGLPPFESQSHSETYKRIRKV-DLKFP----STISGGAADLISRLLVKNPIERLALTEVMDHPWIVAN  279 (281)
T ss_pred             HhcCCchhhhhhHHHHHHHHHc-cccCC----cccChhHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence            9999999999988999888765 45555    4789999999999999999999999999999999653

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=7.5e-24  Score=215.69  Aligned_cols=148  Identities=21%  Similarity=0.399  Sum_probs=118.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++...........+|++.|+|||++.+..++.++|+||+||++|+|
T Consensus       118 lH~~~ivH~dlkp~Nil~~~~~---~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el  194 (285)
T cd05605         118 LHRERIVYRDLKPENILLDDYG---HIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEM  194 (285)
T ss_pred             HHHCCcEecCCCHHHEEECCCC---CEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHH
Confidence            4567999999999999998776   7999999999876554444556899999999999888899999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQT  152 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~  152 (568)
                      ++|..||.+.+.......+.... ...+...+..++..+.+|+.+||..||.+||     +++++++||||....+.
T Consensus       195 ~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~  270 (285)
T cd05605         195 IEGKSPFRQRKEKVKREEVERRV-KEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTANFK  270 (285)
T ss_pred             HHCCCCCCCCchhhHHHHHHHHh-hhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCCCHH
Confidence            99999998866543332222211 1112223346788999999999999999999     89999999999876544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=8.8e-24  Score=224.00  Aligned_cols=143  Identities=28%  Similarity=0.464  Sum_probs=119.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccC-CCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~   78 (568)
                      |.-||+|||||+.||||+.++   ++||+|||||+.+....  .+...+-|.+|.|||++.+. .|+..+|+||+||||.
T Consensus       235 H~~gvlHRDIK~SNiLidn~G---~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~  311 (560)
T KOG0600|consen  235 HSRGVLHRDIKGSNILIDNNG---VLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILA  311 (560)
T ss_pred             hhcCeeeccccccceEEcCCC---CEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHH
Confidence            446999999999999999888   79999999999776543  45667789999999999774 7999999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccC---------CCCCC---------------CcccccCHHHHHHHHHhhccCCCCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTE---------LRFPP---------------GAIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~---------~~~p~---------------~~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      ||+.|++.|.|.+..+++.+|.+...         ..+|.               +....+++.+.+|+..||..||.+|
T Consensus       312 El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR  391 (560)
T KOG0600|consen  312 ELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKR  391 (560)
T ss_pred             HHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCcccc
Confidence            99999999999999988887764211         01110               0123456789999999999999999


Q ss_pred             CCHHHHHhchhHH
Q 008370          135 ITFKEFFNHRFLG  147 (568)
Q Consensus       135 pTaeElL~Hpff~  147 (568)
                      .|+.++|+|+||.
T Consensus       392 ~tA~~aL~seyF~  404 (560)
T KOG0600|consen  392 GTASSALQSEYFT  404 (560)
T ss_pred             ccHHHHhcCcccc
Confidence            9999999999993

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.90  E-value=2e-23  Score=221.95  Aligned_cols=145  Identities=26%  Similarity=0.510  Sum_probs=117.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCC----CCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHK----YDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~----ys~ksDIWSlG   74 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++......  ...+.+||+.|+|||++....    ++.++|+||+|
T Consensus       158 LH~~~IvHrDLKp~NILl~~~~---~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG  234 (370)
T cd05621         158 IHSMGLIHRDVKPDNMLLDKHG---HLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG  234 (370)
T ss_pred             HHHCCeEecCCCHHHEEECCCC---CEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeeh
Confidence            4677999999999999998876   79999999998764332  234678999999999996543    78899999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCC--CCCHHHHHhchhHHHhH
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVE--RITFKEFFNHRFLGELR  150 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~--RpTaeElL~Hpff~~~~  150 (568)
                      |++|+|++|+.||.+.+....+..+.... ...+|..  ..++..+++++.+||..++.+  |++++++++||||....
T Consensus       235 ~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~--~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~~  311 (370)
T cd05621         235 VFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPED--VEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKNDQ  311 (370)
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCc--ccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCCC
Confidence            99999999999999988877777776543 2333332  356889999999999865543  89999999999997643

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.89  E-value=5.5e-24  Score=224.92  Aligned_cols=141  Identities=30%  Similarity=0.606  Sum_probs=127.2

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCc-ccchhhHHHHHHHHHh
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDA-KADLWSVGAILFQLVT   82 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~-ksDIWSlGviL~ELlt   82 (568)
                      +++|||||||+|+++-+.-  +.|||+|||++-.+.+.+...+.||+..|-|||++.+..|+. .+||||||||||-|++
T Consensus       137 LHVVHRDLKPENVVFFEKl--GlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVC  214 (864)
T KOG4717|consen  137 LHVVHRDLKPENVVFFEKL--GLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVC  214 (864)
T ss_pred             hhhhcccCCcceeEEeeec--CceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHh
Confidence            5899999999999988754  489999999999999999999999999999999999999985 5899999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           83 GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        83 G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      |++||...+..+++..|+.. .+..|    ..++.+|++||..||..||++|.+.+++..|+|++.+..
T Consensus       215 Gq~PFqeANDSETLTmImDC-KYtvP----shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  215 GQPPFQEANDSETLTMIMDC-KYTVP----SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             CCCccccccchhhhhhhhcc-cccCc----hhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence            99999999999999988865 34444    478999999999999999999999999999999976543

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.89  E-value=8.5e-24  Score=224.68  Aligned_cols=146  Identities=29%  Similarity=0.542  Sum_probs=116.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---------------------------------------
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---------------------------------------   41 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---------------------------------------   41 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.+...                                       
T Consensus       117 lH~~~ivHrDlKp~NILl~~~g---~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (382)
T cd05625         117 VHKMGFIHRDIKPDNILIDRDG---HIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLE  193 (382)
T ss_pred             HHhCCeecCCCCHHHEEECCCC---CEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchh
Confidence            3567999999999999999877   7999999997532100                                       


Q ss_pred             ---------CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCc
Q 008370           42 ---------DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGA  111 (568)
Q Consensus        42 ---------~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~  111 (568)
                               ....+.+||+.|+|||++.+..|+.++||||+||++|||++|++||.+.+..+...++.... ...+|.  
T Consensus       194 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--  271 (382)
T cd05625         194 RRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPP--  271 (382)
T ss_pred             hhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCC--
Confidence                     01123579999999999999999999999999999999999999999888777666665432 223332  


Q ss_pred             ccccCHHHHHHHHHhhccCCCCCCC---HHHHHhchhHHHhHHh
Q 008370          112 IEELHPDCVDLCRCLLRQNPVERIT---FKEFFNHRFLGELRQT  152 (568)
Q Consensus       112 ~~~ls~~~~dLI~~cL~~dP~~RpT---aeElL~Hpff~~~~~~  152 (568)
                      ...+++++.+++.+|+ .+|.+|++   ++++++||||..+.+.
T Consensus       272 ~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~  314 (382)
T cd05625         272 QAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTIDFS  314 (382)
T ss_pred             cccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcChH
Confidence            2467899999999976 59999997   9999999999876543

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.89  E-value=2e-23  Score=222.13  Aligned_cols=147  Identities=29%  Similarity=0.515  Sum_probs=115.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---------------------------------------
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---------------------------------------   41 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---------------------------------------   41 (568)
                      ||..||+||||||+|||++.++   ++||+|||+++.+...                                       
T Consensus       117 LH~~givHrDlKp~Nili~~~~---~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (381)
T cd05626         117 VHKMGFIHRDIKPDNILIDLDG---HIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLE  193 (381)
T ss_pred             HHhCCeeecCCcHHHEEECCCC---CEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhh
Confidence            3567999999999999998776   7999999997643100                                       


Q ss_pred             ---------CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCc
Q 008370           42 ---------DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGA  111 (568)
Q Consensus        42 ---------~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~  111 (568)
                               ....+.+||+.|+|||++.+..|+.++|||||||++|||++|..||.+.+..+...++.... ...+|.  
T Consensus       194 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~--  271 (381)
T cd05626         194 QRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPP--  271 (381)
T ss_pred             ccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCC--
Confidence                     01124579999999999998899999999999999999999999999887766655555322 233332  


Q ss_pred             ccccCHHHHHHHHHhh--ccCCCCCCCHHHHHhchhHHHhHHh
Q 008370          112 IEELHPDCVDLCRCLL--RQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus       112 ~~~ls~~~~dLI~~cL--~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      ...+++++.+|+.+|+  ..+|..|++++++++||||..+.+.
T Consensus       272 ~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~~  314 (381)
T cd05626         272 QVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVDFS  314 (381)
T ss_pred             CCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCChh
Confidence            2357899999999965  4455569999999999999877654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.89  E-value=6.4e-24  Score=226.68  Aligned_cols=140  Identities=32%  Similarity=0.582  Sum_probs=107.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccC-----------CCCcc
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNH-----------KYDAK   67 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~-----------~ys~k   67 (568)
                      |-.||||.||||-|+|+-..    .+||+|||+|..+..+.   ...+.+||+.||+||.+...           +.+.+
T Consensus       477 H~~gIVHSDLKPANFLlVkG----~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~  552 (677)
T KOG0596|consen  477 HQHGIVHSDLKPANFLLVKG----RLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRK  552 (677)
T ss_pred             HHhceeecCCCcccEEEEee----eEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCc
Confidence            45699999999999999865    59999999998876543   34567999999999998533           25678


Q ss_pred             cchhhHHHHHHHHHhCCCCCCCCc-HHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchh
Q 008370           68 ADLWSVGAILFQLVTGKPPFDGSN-QLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF  145 (568)
Q Consensus        68 sDIWSlGviL~ELltG~~PF~g~~-~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpf  145 (568)
                      +||||+|||||+|+.|++||..-. ....+..|.... ...||.-.  . ..++.++|+.||.+||++||++.++|+|||
T Consensus       553 SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~--~-~~~li~~mK~CL~rdPkkR~si~eLLqhpF  629 (677)
T KOG0596|consen  553 SDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIP--E-NDELIDVMKCCLARDPKKRWSIPELLQHPF  629 (677)
T ss_pred             cchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCC--C-chHHHHHHHHHHhcCcccCCCcHHHhcCcc
Confidence            999999999999999999996533 333333343321 23444211  1 123899999999999999999999999999


Q ss_pred             HHH
Q 008370          146 LGE  148 (568)
Q Consensus       146 f~~  148 (568)
                      +.-
T Consensus       630 l~~  632 (677)
T KOG0596|consen  630 LQI  632 (677)
T ss_pred             ccc
Confidence            854

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.89  E-value=2.8e-23  Score=216.63  Aligned_cols=148  Identities=24%  Similarity=0.515  Sum_probs=118.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhc-----cCCCCcccchhhH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQ-----NHKYDAKADLWSV   73 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~-----~~~ys~ksDIWSl   73 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++......  .....+||+.|+|||++.     ...++.++|||||
T Consensus       118 lH~~~iiHrDlkp~Nili~~~~---~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSl  194 (332)
T cd05623         118 VHQLHYVHRDIKPDNILMDMNG---HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSL  194 (332)
T ss_pred             HHHCCeEecCCCHHHEEECCCC---CEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEee
Confidence            3567999999999999998776   69999999997654322  223467999999999986     3467889999999


Q ss_pred             HHHHHHHHhCCCCCCCCcHHHHHHHHHhccC-CCCCCCcccccCHHHHHHHHHhhccCCCC--CCCHHHHHhchhHHHhH
Q 008370           74 GAILFQLVTGKPPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVE--RITFKEFFNHRFLGELR  150 (568)
Q Consensus        74 GviL~ELltG~~PF~g~~~~~~~~~Il~~~~-~~~p~~~~~~ls~~~~dLI~~cL~~dP~~--RpTaeElL~Hpff~~~~  150 (568)
                      ||++|+|++|+.||.+.+..+.+.++..... ..+|. ....+++++++|+++||..++.+  |++++++++||||..+.
T Consensus       195 Gvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~~  273 (332)
T cd05623         195 GVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPA-QVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGID  273 (332)
T ss_pred             HHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCC-ccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCCC
Confidence            9999999999999999888888877765432 22332 23467899999999999765444  68999999999998776


Q ss_pred             Hh
Q 008370          151 QT  152 (568)
Q Consensus       151 ~~  152 (568)
                      +.
T Consensus       274 ~~  275 (332)
T cd05623         274 WD  275 (332)
T ss_pred             HH
Confidence            54

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.89  E-value=2.6e-23  Score=216.75  Aligned_cols=141  Identities=26%  Similarity=0.445  Sum_probs=110.0

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCC
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK   84 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~   84 (568)
                      +|+||||||+|||++.++   .+||+|||+++.... .......|++.|+|||++.+..++.++|||||||++|+|++|+
T Consensus       124 ~ivH~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~  199 (331)
T cd06649         124 QIMHRDVKPSNILVNSRG---EIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGR  199 (331)
T ss_pred             CEEcCCCChhhEEEcCCC---cEEEccCcccccccc-cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCC
Confidence            699999999999999876   699999999976543 2334567999999999999889999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHhcc-------------------------------------------CCCCCCCcccccCHHHHH
Q 008370           85 PPFDGSNQLQLFQNILTST-------------------------------------------ELRFPPGAIEELHPDCVD  121 (568)
Q Consensus        85 ~PF~g~~~~~~~~~Il~~~-------------------------------------------~~~~p~~~~~~ls~~~~d  121 (568)
                      .||...+..+....+....                                           ....+......+++++.+
T Consensus       200 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  279 (331)
T cd06649         200 YPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQE  279 (331)
T ss_pred             CCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHH
Confidence            9997665443322111000                                           000011111245788999


Q ss_pred             HHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370          122 LCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       122 LI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |+.+||+.||++|||++++++||||...
T Consensus       280 li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         280 FVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             HHHHHccCCcccCCCHHHHhcChHHhhc
Confidence            9999999999999999999999999754

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=2.2e-23  Score=221.19  Aligned_cols=146  Identities=29%  Similarity=0.506  Sum_probs=116.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--------------------------------------
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--------------------------------------   42 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--------------------------------------   42 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.+....                                      
T Consensus       117 LH~~givHrDlkp~NIll~~~~---~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (377)
T cd05629         117 VHKLGFIHRDIKPDNILIDRGG---HIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQ  193 (377)
T ss_pred             HHhCCeeccCCCHHHEEECCCC---CEEEeecccccccccccccccccccccccccccccccccccccccccccccchhh
Confidence            4667999999999999998776   79999999996321100                                      


Q ss_pred             ----------CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCc
Q 008370           43 ----------LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGA  111 (568)
Q Consensus        43 ----------~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~  111 (568)
                                .....+||+.|+|||++.+..|+.++|||||||++|||++|.+||.+.+..+.+..+.... ...+|.. 
T Consensus       194 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~-  272 (377)
T cd05629         194 IATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDD-  272 (377)
T ss_pred             hhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCC-
Confidence                      0012579999999999998899999999999999999999999999888777777666432 2233321 


Q ss_pred             ccccCHHHHHHHHHhhccCCCCC---CCHHHHHhchhHHHhHHh
Q 008370          112 IEELHPDCVDLCRCLLRQNPVER---ITFKEFFNHRFLGELRQT  152 (568)
Q Consensus       112 ~~~ls~~~~dLI~~cL~~dP~~R---pTaeElL~Hpff~~~~~~  152 (568)
                       ..++.++.+|+.+||. +|.+|   +++.+++.||||....+.
T Consensus       273 -~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~~  314 (377)
T cd05629         273 -IHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVDWD  314 (377)
T ss_pred             -CCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCCHH
Confidence             2568899999999997 67765   599999999999876554

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.89  E-value=1.1e-23  Score=223.08  Aligned_cols=147  Identities=26%  Similarity=0.461  Sum_probs=116.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---------------------------------------
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---------------------------------------   41 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---------------------------------------   41 (568)
                      ||..||+||||||+|||++.++   .+||+|||+|..+...                                       
T Consensus       117 lH~~~ivHrDlkp~Nill~~~~---~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (376)
T cd05598         117 VHKMGFIHRDIKPDNILIDRDG---HIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRK  193 (376)
T ss_pred             HHHCCeEeCCCCHHHEEECCCC---CEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhh
Confidence            3557999999999999998876   7999999997532100                                       


Q ss_pred             -----CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCccccc
Q 008370           42 -----DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEEL  115 (568)
Q Consensus        42 -----~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~l  115 (568)
                           ......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+.... ...++  ....+
T Consensus       194 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~  271 (376)
T cd05598         194 RQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIP--SQAKL  271 (376)
T ss_pred             hhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCC--CCCCC
Confidence                 00123579999999999999999999999999999999999999999888776666554332 22222  22367


Q ss_pred             CHHHHHHHHHhhccCCCCCC---CHHHHHhchhHHHhHHhh
Q 008370          116 HPDCVDLCRCLLRQNPVERI---TFKEFFNHRFLGELRQTV  153 (568)
Q Consensus       116 s~~~~dLI~~cL~~dP~~Rp---TaeElL~Hpff~~~~~~~  153 (568)
                      ++.+.+|+.+|+ .+|.+|+   ++.++++||||..+....
T Consensus       272 s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~~~~~  311 (376)
T cd05598         272 SREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGIDFAS  311 (376)
T ss_pred             CHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCCCHHH
Confidence            889999999976 5999999   999999999998765443

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.89  E-value=1.6e-23  Score=217.86  Aligned_cols=145  Identities=28%  Similarity=0.649  Sum_probs=121.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++..... ......+||+.|+|||++.+..++.++|+||+||++|+
T Consensus       117 lH~~~ivHrDikp~Nill~~~~---~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~e  193 (323)
T cd05615         117 LHRRGIIYRDLKLDNVMLDSEG---HIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYE  193 (323)
T ss_pred             HHHCCeeccCCCHHHeEECCCC---CEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHH
Confidence            3567999999999999999876   6999999999764322 23445679999999999998899999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQTV  153 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~~  153 (568)
                      |++|+.||.+.+....+..+... ...+|    ..++.++.+++.+||..+|.+|++     .+++++||||..+.+..
T Consensus       194 lltG~~pf~~~~~~~~~~~i~~~-~~~~p----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~~~  267 (323)
T cd05615         194 MLAGQPPFDGEDEDELFQSIMEH-NVSYP----KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRIDWDK  267 (323)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhC-CCCCC----ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCCCHHH
Confidence            99999999998887777777654 33333    356889999999999999999997     57999999998876543

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.89  E-value=6.8e-24  Score=219.55  Aligned_cols=144  Identities=28%  Similarity=0.581  Sum_probs=121.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++..... ......+|++.|+|||++.+..++.++|||||||++|+
T Consensus       114 lH~~~i~H~dlkp~Nil~~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~e  190 (318)
T cd05582         114 LHSLGIIYRDLKPENILLDEEG---HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFE  190 (318)
T ss_pred             HHHCCEecCCCCHHHeEECCCC---cEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeee
Confidence            4567999999999999998876   6999999999865433 33445789999999999998889999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQT  152 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~  152 (568)
                      |++|+.||.+.+..+....+... ...+|    ..+++.+.+|+++||+.||.+||+     +++++.||||..+.+.
T Consensus       191 l~tg~~p~~~~~~~~~~~~i~~~-~~~~p----~~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~~  263 (318)
T cd05582         191 MLTGSLPFQGKDRKETMTMILKA-KLGMP----QFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDWN  263 (318)
T ss_pred             eccCCCCCCCCCHHHHHHHHHcC-CCCCC----CCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCHH
Confidence            99999999988877777666543 23333    357889999999999999999999     7889999999876544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.89  E-value=1.3e-23  Score=219.60  Aligned_cols=145  Identities=26%  Similarity=0.452  Sum_probs=113.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.....  ....+||+.|+|||++.+ ..++.++||||+||++|+
T Consensus       134 LH~~~ivHrdikp~Nil~~~~~---~~kl~Dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  208 (343)
T cd07878         134 IHSAGIIHRDLKPSNVAVNEDC---ELRILDFGLARQADDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  208 (343)
T ss_pred             HHHCCeecccCChhhEEECCCC---CEEEcCCccceecCCC--cCCccccccccCchHhcCCccCCchhhhHhHHHHHHH
Confidence            3557999999999999999876   6999999999875432  345678999999999876 568899999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCC----------------------CCCC----CcccccCHHHHHHHHHhhccCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTEL----------------------RFPP----GAIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~----------------------~~p~----~~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      |++|+.||.+.+..+.+..+......                      ..+.    .......+.+.+|+.+||..||.+
T Consensus       209 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~  288 (343)
T cd07878         209 LLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDK  288 (343)
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhh
Confidence            99999999887765555444321100                      0010    011234567899999999999999


Q ss_pred             CCCHHHHHhchhHHHhH
Q 008370          134 RITFKEFFNHRFLGELR  150 (568)
Q Consensus       134 RpTaeElL~Hpff~~~~  150 (568)
                      |||+.|+++||||....
T Consensus       289 R~s~~ell~hp~~~~~~  305 (343)
T cd07878         289 RISASEALAHPYFSQYH  305 (343)
T ss_pred             CCCHHHHhcCcchhccC
Confidence            99999999999997643

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.89  E-value=8.8e-24  Score=222.25  Aligned_cols=145  Identities=23%  Similarity=0.426  Sum_probs=109.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-----CCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-----HKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-----~~ys~ksDIWSlG   74 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.+... .......||..|+|||++..     ..++.++||||||
T Consensus       184 LH~~~ivHrDlkp~NIll~~~~---~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslG  260 (353)
T PLN00034        184 LHRRHIVHRDIKPSNLLINSAK---NVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLG  260 (353)
T ss_pred             HHHCCEeecCCCHHHEEEcCCC---CEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHH
Confidence            3567999999999999999876   6999999999876432 22345689999999998743     2335689999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++|+|++|+.||......+... +........++.....++.++.+||.+||..||++||++.|+++||||...
T Consensus       261 vil~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        261 VSILEFYLGRFPFGVGRQGDWAS-LMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA  334 (353)
T ss_pred             HHHHHHHhCCCCCCCCCCccHHH-HHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence            99999999999997433222111 111111112223334678899999999999999999999999999999664

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.89  E-value=1.7e-23  Score=213.26  Aligned_cols=145  Identities=23%  Similarity=0.510  Sum_probs=116.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..+|+||||||+||+++.++   .+||+|||++.............|++.|+|||++.+..++.++|+||+||++|+|
T Consensus       118 lH~~~iiH~dikp~Nil~~~~~---~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l  194 (285)
T cd05630         118 LHQERIVYRDLKPENILLDDHG---HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM  194 (285)
T ss_pred             HHhCCEEeCCCCHHHEEECCCC---CEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHH
Confidence            4567999999999999998876   6999999999876544444456899999999999988999999999999999999


Q ss_pred             HhCCCCCCCCcHH---HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHh
Q 008370           81 VTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQT  152 (568)
Q Consensus        81 ltG~~PF~g~~~~---~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~  152 (568)
                      ++|+.||.+....   +....+.....    ......+++++.+|+.+||+.||.+|||     ++|+++||||.++.+.
T Consensus       195 ~~g~~Pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~~  270 (285)
T cd05630         195 IAGQSPFQQRKKKIKREEVERLVKEVQ----EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQINFK  270 (285)
T ss_pred             HhCCCCCCCCCccchHHHHHhhhhhhh----hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhccCHH
Confidence            9999999865422   22222222111    1223457889999999999999999999     8999999999876554

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.89  E-value=1.7e-23  Score=224.34  Aligned_cols=146  Identities=19%  Similarity=0.268  Sum_probs=108.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC--CCCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ--DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~--~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..|||||||||+|||++.++   .+||+|||+++.....  ......+||+.|+|||++.+..|+.++||||+||++|
T Consensus       198 lH~~~IvHrDiKP~NIll~~~~---~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~  274 (391)
T PHA03212        198 LHENRIIHRDIKAENIFINHPG---DVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLF  274 (391)
T ss_pred             HHhCCcccCCCChHhEEEcCCC---CEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHH
Confidence            4567999999999999998876   6999999999754321  2334568999999999999889999999999999999


Q ss_pred             HHHhCCCCCCCCc-------HHHHHHHHHhcc-------------------------CCCCCCC-----cccccCHHHHH
Q 008370           79 QLVTGKPPFDGSN-------QLQLFQNILTST-------------------------ELRFPPG-----AIEELHPDCVD  121 (568)
Q Consensus        79 ELltG~~PF~g~~-------~~~~~~~Il~~~-------------------------~~~~p~~-----~~~~ls~~~~d  121 (568)
                      +|++|+.||.+..       ....+..++...                         ....+..     ....++.++.+
T Consensus       275 elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  354 (391)
T PHA03212        275 EMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEY  354 (391)
T ss_pred             HHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHH
Confidence            9999998875421       111121121110                         0000000     01124567899


Q ss_pred             HHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370          122 LCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       122 LI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ||.+||..||.+|||++|+++||||..+
T Consensus       355 Li~~mL~~dP~~Rpta~elL~hp~f~~~  382 (391)
T PHA03212        355 LICKMLAFDAHHRPSAEALLDFAAFQDI  382 (391)
T ss_pred             HHHHHhcCChhhCCCHHHHhcChhhccC
Confidence            9999999999999999999999999654

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.89  E-value=1.4e-23  Score=228.15  Aligned_cols=135  Identities=24%  Similarity=0.421  Sum_probs=114.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..|+|||||||.|||+.  +..++++|+|||.++.....  +.+.|-|..|.|||++....|+..+||||||++||+|
T Consensus       431 LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~~~~~~--~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~M  506 (612)
T KOG0603|consen  431 LHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWSELERS--CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEM  506 (612)
T ss_pred             HHhcCeeecCCChhheeec--CCCCcEEEEEechhhhCchh--hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHH
Confidence            4678999999999999996  22337999999999887655  5566778899999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHH-HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           81 VTGKPPFDGSNQL-QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        81 ltG~~PF~g~~~~-~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      ++|+.||...... ++..++...   .+.    ..++..+++|+.+||+.||.+|+++.++..||||
T Consensus       507 L~G~tp~~~~P~~~ei~~~i~~~---~~s----~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  507 LTGRTLFAAHPAGIEIHTRIQMP---KFS----ECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             HhCCCccccCCchHHHHHhhcCC---ccc----cccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            9999999876655 444444221   121    5789999999999999999999999999999999

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.89  E-value=2.1e-23  Score=220.91  Aligned_cols=147  Identities=29%  Similarity=0.409  Sum_probs=114.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccC-CCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL   77 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++......  ......+++.|+|||++.+. .++.++||||+||++
T Consensus       119 LH~~~ivH~dlkp~Nili~~~~---~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il  195 (372)
T cd07853         119 LHSAGILHRDIKPGNLLVNSNC---VLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIF  195 (372)
T ss_pred             HHhCCeeCCCCChHHEEECCCC---CEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHH
Confidence            4567999999999999999876   79999999998654322  22345688999999998764 578899999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhcc----------------------CCCCCC-----CcccccCHHHHHHHHHhhccC
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTST----------------------ELRFPP-----GAIEELHPDCVDLCRCLLRQN  130 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~----------------------~~~~p~-----~~~~~ls~~~~dLI~~cL~~d  130 (568)
                      |+|++|+.||.+.+..+.+..+....                      ....+.     ......++++.+|+.+||..|
T Consensus       196 ~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d  275 (372)
T cd07853         196 AELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFD  275 (372)
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCC
Confidence            99999999999887665554443210                      000010     112345788999999999999


Q ss_pred             CCCCCCHHHHHhchhHHHhH
Q 008370          131 PVERITFKEFFNHRFLGELR  150 (568)
Q Consensus       131 P~~RpTaeElL~Hpff~~~~  150 (568)
                      |.+|||+.|+++||||...+
T Consensus       276 P~~R~t~~e~l~hp~~~~~~  295 (372)
T cd07853         276 PDKRISAADALAHPYLDEGR  295 (372)
T ss_pred             hhhCcCHHHHhcCHhhCCCc
Confidence            99999999999999997654

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.89  E-value=4.9e-23  Score=218.97  Aligned_cols=146  Identities=25%  Similarity=0.494  Sum_probs=117.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCC----CCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHK----YDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~----ys~ksDIWSlG   74 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.+....  ...+.+||+.|+|||++....    ++.++||||||
T Consensus       158 LH~~~ivHrDLkp~NIll~~~~---~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlG  234 (371)
T cd05622         158 IHSMGFIHRDVKPDNMLLDKSG---HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG  234 (371)
T ss_pred             HHHCCEEeCCCCHHHEEECCCC---CEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehh
Confidence            4667999999999999998876   79999999998765432  234678999999999986543    78899999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCC--CCCHHHHHhchhHHHhHH
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVE--RITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~--RpTaeElL~Hpff~~~~~  151 (568)
                      |++|+|++|..||.+.+....+..+.... ...+|.  ...++..+++||.+||..++.+  |++++++++|+||....+
T Consensus       235 vilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~--~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~~~  312 (371)
T cd05622         235 VFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD--DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW  312 (371)
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCC--cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCCCh
Confidence            99999999999999988887887776543 223332  2367899999999999844433  789999999999976443

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.89  E-value=1.9e-23  Score=214.85  Aligned_cols=147  Identities=24%  Similarity=0.444  Sum_probs=113.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhcc-CCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~   78 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++...... ......+++.|+|||++.+ ..++.++||||+||++|
T Consensus       120 lH~~~ivH~dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~  196 (309)
T cd07872         120 CHRRKVLHRDLKPQNLLINERG---ELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFF  196 (309)
T ss_pred             HHHCCeecCCCCHHHEEECCCC---CEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHH
Confidence            4567999999999999998876   69999999997654322 2334578899999998865 46888999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccC------------------CCCCC-------CcccccCHHHHHHHHHhhccCCCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTE------------------LRFPP-------GAIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~------------------~~~p~-------~~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      +|++|++||.+.+..+.+..+.....                  ..++.       .....+++++.+|+.+||..||.+
T Consensus       197 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~  276 (309)
T cd07872         197 EMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKK  276 (309)
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhh
Confidence            99999999988776554443332110                  00111       011246788999999999999999


Q ss_pred             CCCHHHHHhchhHHHhH
Q 008370          134 RITFKEFFNHRFLGELR  150 (568)
Q Consensus       134 RpTaeElL~Hpff~~~~  150 (568)
                      |||++|+++||||....
T Consensus       277 R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         277 RISAEEAMKHAYFRSLG  293 (309)
T ss_pred             CCCHHHHhcChhhhhcc
Confidence            99999999999997764

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=8.7e-23  Score=213.05  Aligned_cols=149  Identities=23%  Similarity=0.514  Sum_probs=117.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhcc-----CCCCcccchhhH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQN-----HKYDAKADLWSV   73 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~~-----~~ys~ksDIWSl   73 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.+.....  ....+||+.|+|||++..     ..++.++||||+
T Consensus       118 lH~~~ivH~dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diwsl  194 (331)
T cd05597         118 VHQLGYVHRDIKPDNVLLDKNG---HIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSL  194 (331)
T ss_pred             HHhCCeEECCCCHHHEEECCCC---CEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehh
Confidence            4567999999999999998776   699999999977654332  223579999999999863     457889999999


Q ss_pred             HHHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCC--CCCCHHHHHhchhHHHhH
Q 008370           74 GAILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPV--ERITFKEFFNHRFLGELR  150 (568)
Q Consensus        74 GviL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~--~RpTaeElL~Hpff~~~~  150 (568)
                      ||++|+|++|+.||.+.+..+.+..+.... ...+++. ...++..+++|+++||..++.  .|++++++++||||....
T Consensus       195 G~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~~  273 (331)
T cd05597         195 GVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPD-VTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGID  273 (331)
T ss_pred             hhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCc-cCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCCC
Confidence            999999999999999888777777776533 2333332 235788999999998865444  378999999999998776


Q ss_pred             Hhh
Q 008370          151 QTV  153 (568)
Q Consensus       151 ~~~  153 (568)
                      +..
T Consensus       274 ~~~  276 (331)
T cd05597         274 WDN  276 (331)
T ss_pred             HHH
Confidence            543

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.89  E-value=3.1e-23  Score=210.26  Aligned_cols=145  Identities=26%  Similarity=0.467  Sum_probs=114.2

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccC---CCCcccchhhHHHHHHHH
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH---KYDAKADLWSVGAILFQL   80 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~---~ys~ksDIWSlGviL~EL   80 (568)
                      .+|+||||||+||+++.++   .+||+|||+++............|++.|+|||++...   .++.++||||+||++|+|
T Consensus       127 ~~i~H~dlkp~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el  203 (288)
T cd06616         127 LKIIHRDVKPSNILLDRNG---NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEV  203 (288)
T ss_pred             CCeeccCCCHHHEEEccCC---cEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHH
Confidence            4899999999999998876   6999999999876544444455789999999998765   688999999999999999


Q ss_pred             HhCCCCCCCCcH-HHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           81 VTGKPPFDGSNQ-LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        81 ltG~~PF~g~~~-~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      ++|+.||..... .+....+........+......++..+.+|+.+||..+|.+||++++++.||||....+
T Consensus       204 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~~  275 (288)
T cd06616         204 ATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDYEE  275 (288)
T ss_pred             HhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhchhh
Confidence            999999976542 22223333222223333333457889999999999999999999999999999976543

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.89  E-value=6.6e-23  Score=203.56  Aligned_cols=139  Identities=27%  Similarity=0.551  Sum_probs=115.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++..... .......|++.|+|||++.+..++.++|+||+||++|+
T Consensus       118 lH~~~i~H~di~p~nil~~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~  194 (257)
T cd08223         118 LHEKHILHRDLKTQNVFLTRTN---IIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYE  194 (257)
T ss_pred             HHhCCeeccCCCchhEEEecCC---cEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHH
Confidence            3567999999999999998776   7999999999876432 23345678999999999998889999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|+.||.+.+.......+.......    .....++.+.+++.+||..+|.+||++.++++||||
T Consensus       195 l~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         195 MATLKHAFNAKDMNSLVYRIIEGKLPP----MPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             HHcCCCCCCCCCHHHHHHHHHhcCCCC----CccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            999999998877666555554432222    224678899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.88  E-value=6.9e-23  Score=208.62  Aligned_cols=148  Identities=20%  Similarity=0.438  Sum_probs=119.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++............|++.|+|||++.+..++.++|+||+||++|+|
T Consensus       118 lH~~~iiH~dikp~Nili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l  194 (285)
T cd05632         118 LHRENTVYRDLKPENILLDDYG---HIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEM  194 (285)
T ss_pred             HHhCCeeecCCCHHHEEECCCC---CEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHH
Confidence            3567999999999999998776   6999999999876544444556899999999999888899999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQT  152 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~  152 (568)
                      ++|..||.+.........+.... ..........+++.+.+|+.+||..+|++||+     +.++++|+||......
T Consensus       195 ~~g~~P~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~  270 (285)
T cd05632         195 IEGQSPFRGRKEKVKREEVDRRV-LETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMNFK  270 (285)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhh-hccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCCHH
Confidence            99999998876554433332221 11112233467888999999999999999999     8899999999887544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.88  E-value=7.7e-23  Score=213.43  Aligned_cols=149  Identities=21%  Similarity=0.489  Sum_probs=119.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhcc-----CCCCcccchhhH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQN-----HKYDAKADLWSV   73 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~~-----~~ys~ksDIWSl   73 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.......  ....+||+.|+|||++.+     ..++.++|+||+
T Consensus       118 lH~~~iiHrDlkp~Nill~~~~---~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSl  194 (331)
T cd05624         118 IHQLHYVHRDIKPDNVLLDMNG---HIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSL  194 (331)
T ss_pred             HHHCCeeeccCchHHEEEcCCC---CEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEee
Confidence            4667999999999999998776   699999999987654332  234679999999999865     467889999999


Q ss_pred             HHHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCC--CCCHHHHHhchhHHHhH
Q 008370           74 GAILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVE--RITFKEFFNHRFLGELR  150 (568)
Q Consensus        74 GviL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~--RpTaeElL~Hpff~~~~  150 (568)
                      ||++|+|++|+.||.+.+..+.+.++.... ...+|. ....++..+.+++.+||..++.+  |++++++++|+||....
T Consensus       195 Gvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~~  273 (331)
T cd05624         195 GVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPS-HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGID  273 (331)
T ss_pred             ehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCC-ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCCC
Confidence            999999999999999888877777776543 233333 23457899999999999876554  56899999999998766


Q ss_pred             Hhh
Q 008370          151 QTV  153 (568)
Q Consensus       151 ~~~  153 (568)
                      +..
T Consensus       274 ~~~  276 (331)
T cd05624         274 WEN  276 (331)
T ss_pred             HHH
Confidence            543

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.88  E-value=3.6e-23  Score=221.32  Aligned_cols=148  Identities=21%  Similarity=0.291  Sum_probs=112.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..|||||||||+|||++.++   .+||+|||+++.+....   ......||+.|+|||++.+..|+.++|||||||++
T Consensus       201 LH~~givHrDlkp~Nill~~~~---~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil  277 (392)
T PHA03207        201 LHGRGIIHRDVKTENIFLDEPE---NAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVL  277 (392)
T ss_pred             HHHCCccccCCCHHHEEEcCCC---CEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHH
Confidence            4567999999999999999876   69999999997654322   22346799999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCcH---HHHHHHHHhc---cCCCCCC------------------------Cc--ccccCHHHHHHHHH
Q 008370           78 FQLVTGKPPFDGSNQ---LQLFQNILTS---TELRFPP------------------------GA--IEELHPDCVDLCRC  125 (568)
Q Consensus        78 ~ELltG~~PF~g~~~---~~~~~~Il~~---~~~~~p~------------------------~~--~~~ls~~~~dLI~~  125 (568)
                      |+|++|+.||.+...   ...+..+...   ....++.                        ..  ...++.++.+||.+
T Consensus       278 ~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  357 (392)
T PHA03207        278 FEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAK  357 (392)
T ss_pred             HHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHH
Confidence            999999999976532   1222222211   0111110                        00  01345678899999


Q ss_pred             hhccCCCCCCCHHHHHhchhHHHhHH
Q 008370          126 LLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       126 cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      ||..||.+||++.|++.||||.+..+
T Consensus       358 ml~~dp~~Rpsa~e~l~~p~f~~~~~  383 (392)
T PHA03207        358 MLTFDQEFRPSAQDILSLPLFTKEPI  383 (392)
T ss_pred             HhccChhhCCCHHHHhhCchhhccch
Confidence            99999999999999999999976544

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.88  E-value=5.1e-23  Score=211.48  Aligned_cols=146  Identities=23%  Similarity=0.376  Sum_probs=104.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCC-CCCcEEEeecccceecCCCC----CCccccCCCcccChhhhcc-CCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNE-VTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~-~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlG   74 (568)
                      ||..+|+||||||+|||+..++ ..+.+||+|||+++......    ......||+.|+|||++.+ ..++.++||||+|
T Consensus       124 lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG  203 (317)
T cd07867         124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIG  203 (317)
T ss_pred             HHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHH
Confidence            3567999999999999995432 23479999999998764322    2234578999999999876 4578899999999


Q ss_pred             HHHHHHHhCCCCCCCCcHH---------HHHHHHHhccC-------------CCCC--------------------CCcc
Q 008370           75 AILFQLVTGKPPFDGSNQL---------QLFQNILTSTE-------------LRFP--------------------PGAI  112 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~---------~~~~~Il~~~~-------------~~~p--------------------~~~~  112 (568)
                      |++|+|++|++||.+....         ..+..+.....             ..++                    ....
T Consensus       204 ~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (317)
T cd07867         204 CIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHK  283 (317)
T ss_pred             HHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhccc
Confidence            9999999999999753211         11111111000             0000                    0001


Q ss_pred             cccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370          113 EELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus       113 ~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      ......+.+|+.+||..||.+|||++|+++||||
T Consensus       284 ~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         284 VKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             CCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            1234568899999999999999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.88  E-value=2.6e-23  Score=219.53  Aligned_cols=145  Identities=22%  Similarity=0.330  Sum_probs=106.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..+||||||||+|||++.++   .+||+|||+++............||+.|+|||++.+..|+.++|||||||++|||
T Consensus       173 LH~~~ivHrDlkp~Nill~~~~---~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~el  249 (357)
T PHA03209        173 LHAQRIIHRDVKTENIFINDVD---QVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEM  249 (357)
T ss_pred             HHHCCeecCCCCHHHEEECCCC---CEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHH
Confidence            4667999999999999998876   6999999999765443344456799999999999998999999999999999999


Q ss_pred             HhCCCCC-CCCcH---------HHHHHHHHhcc---CCCCCCC--------------------------cccccCHHHHH
Q 008370           81 VTGKPPF-DGSNQ---------LQLFQNILTST---ELRFPPG--------------------------AIEELHPDCVD  121 (568)
Q Consensus        81 ltG~~PF-~g~~~---------~~~~~~Il~~~---~~~~p~~--------------------------~~~~ls~~~~d  121 (568)
                      +++..|+ .....         ...+..++...   ...++..                          ....++.++.+
T Consensus       250 l~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (357)
T PHA03209        250 LAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEF  329 (357)
T ss_pred             HHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHH
Confidence            9855444 33211         11111111110   0111100                          00134567788


Q ss_pred             HHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370          122 LCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus       122 LI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ||.+||..||.+|||+.|+++||||+.
T Consensus       330 li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        330 LVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             HHHHHHcCCcccCcCHHHHhcCchhcc
Confidence            999999999999999999999999964

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.88  E-value=3.7e-23  Score=222.52  Aligned_cols=142  Identities=24%  Similarity=0.451  Sum_probs=120.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhc-----cCCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~-----~~~ys~ksDIWSlGv   75 (568)
                      |.-.|||||||+-|||++-+|   .|+|+|||.+.... ......+++|||+|||||++.     ..+|++++||||||+
T Consensus       147 Hs~~iIHRDLKAGNiL~TldG---dirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGI  223 (1187)
T KOG0579|consen  147 HSQNIIHRDLKAGNILLTLDG---DIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGI  223 (1187)
T ss_pred             hhcchhhhhccccceEEEecC---cEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhh
Confidence            445899999999999999998   59999999976543 234567899999999999874     578999999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      +|.||.-+.+|....++...+-+|....++.+-  .+...+..+.||+++||.+||..||++.++++||||..
T Consensus       224 TLIEMAqiEPPHhelnpMRVllKiaKSePPTLl--qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~  294 (1187)
T KOG0579|consen  224 TLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLL--QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQN  294 (1187)
T ss_pred             HHHHHhccCCCccccchHHHHHHHhhcCCCccc--CcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCccccc
Confidence            999999999999999999888888766433221  23456788999999999999999999999999999973

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.88  E-value=1.1e-22  Score=202.78  Aligned_cols=140  Identities=26%  Similarity=0.490  Sum_probs=113.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC----CccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL----ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~----~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++.......    .....|+..|+|||++.+..++.++|+||+||+
T Consensus       120 lH~~~i~H~dl~p~nilv~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  196 (263)
T cd06625         120 LHSNMIVHRDIKGANILRDSAG---NVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCT  196 (263)
T ss_pred             HHhCCeecCCCCHHHEEEcCCC---CEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHH
Confidence            3567999999999999998776   699999999976543211    134568889999999998889999999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      +|+|++|+.||...........+....   .....+..++..+.+++.+||..+|.+|||+.++++|+||
T Consensus       197 l~el~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         197 VVEMLTEKPPWAEFEAMAAIFKIATQP---TNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHHHHhCCCCccccchHHHHHHHhccC---CCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            999999999998776655554443321   1122334678899999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.88  E-value=6e-23  Score=222.87  Aligned_cols=143  Identities=29%  Similarity=0.489  Sum_probs=117.7

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhcc--CCCCcccchhhHHHHHHH
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQN--HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~--~~ys~ksDIWSlGviL~E   79 (568)
                      --.|||||||-+|+|++.-  .+++||.|||-++.+. .+.++.++.||..|||||++-.  .+|+..+|||||||++.|
T Consensus       693 en~IVHRDIKGDNVLvNTy--SGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vE  770 (1226)
T KOG4279|consen  693 ENKIVHRDIKGDNVLVNTY--SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVE  770 (1226)
T ss_pred             hcceeeccccCCcEEEeec--cceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEe
Confidence            3489999999999999763  4599999999998764 4567889999999999999954  478999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |.||++||......+.  ...+-+.+...|..+..++.+++.||.+|+..+|.+||++.++|.+||++.-
T Consensus       771 MATGrPPF~ElgspqA--AMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  771 MATGRPPFVELGSPQA--AMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             eccCCCCeeecCChhH--hhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence            9999999975432221  1112234444556677899999999999999999999999999999999654

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.88  E-value=1.7e-22  Score=200.27  Aligned_cols=139  Identities=26%  Similarity=0.475  Sum_probs=116.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++...... ......|++.|+|||++.+..++.++|+|||||++|+
T Consensus       117 lH~~~i~h~dl~~~nili~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  193 (256)
T cd08529         117 LHSKKILHRDIKSLNLFLDAYD---NVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYE  193 (256)
T ss_pred             HHHCCcccCCCCcceEEEeCCC---CEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHH
Confidence            4567999999999999999876   69999999998765433 2344578899999999998889999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|+.||...+.......+.......    ....++..+.+++.+||+.+|++||++.++++|||+
T Consensus       194 l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         194 CCTGKHPFDANNQGALILKIIRGVFPP----VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHcCCCCC----CccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence            999999999888766666665443222    223567899999999999999999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.88  E-value=7.7e-23  Score=209.40  Aligned_cols=149  Identities=26%  Similarity=0.422  Sum_probs=114.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++..... .......+++.|+|||++.+ ..++.++|||||||++|
T Consensus       120 lH~~~i~H~dlkp~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~  196 (301)
T cd07873         120 CHRRKVLHRDLKPQNLLINERG---ELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFY  196 (301)
T ss_pred             HHhCCeeCCCCCHHHEEECCCC---cEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHH
Confidence            4667999999999999998876   6999999999765422 22334567889999999865 45788999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCC------------------CCCC-------CcccccCHHHHHHHHHhhccCCCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTEL------------------RFPP-------GAIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~------------------~~p~-------~~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      +|++|++||.+.+..+....+......                  .++.       .....+++.+.+||.+||..||.+
T Consensus       197 el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~  276 (301)
T cd07873         197 EMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRK  276 (301)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCccc
Confidence            999999999987765554433321100                  0110       011246778999999999999999


Q ss_pred             CCCHHHHHhchhHHHhHHh
Q 008370          134 RITFKEFFNHRFLGELRQT  152 (568)
Q Consensus       134 RpTaeElL~Hpff~~~~~~  152 (568)
                      |||++|+++||||..+...
T Consensus       277 R~t~~eil~h~~f~~~~~~  295 (301)
T cd07873         277 RISAEEAMKHPYFHCLGER  295 (301)
T ss_pred             CcCHHHHhcCcccccccch
Confidence            9999999999999776543

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.88  E-value=1e-22  Score=204.22  Aligned_cols=139  Identities=27%  Similarity=0.448  Sum_probs=110.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhc-----cCCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~-----~~~ys~ksDIWSlGv   75 (568)
                      |..+|+||||||+||+++.++   .+||+|||+++..... .......|++.|+|||++.     ...++.++|+||+||
T Consensus       128 H~~~ivh~dl~~~nili~~~~---~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv  204 (272)
T cd06637         128 HQHKVIHRDIKGQNVLLTENA---EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGI  204 (272)
T ss_pred             HHCCCccCCCCHHHEEECCCC---CEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHH
Confidence            456899999999999999876   6999999999865432 2334567899999999985     346788999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      ++|+|++|+.||...........+.....   +......++..+.+|+.+||..+|.+|||+.+++.||||
T Consensus       205 ~l~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         205 TAIEMAEGAPPLCDMHPMRALFLIPRNPA---PRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHHHHhCCCCccccCHHHHHHHHhcCCC---CCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            99999999999987665544443332211   111223567899999999999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.88  E-value=2.1e-22  Score=210.54  Aligned_cols=139  Identities=24%  Similarity=0.446  Sum_probs=108.2

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhC
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG   83 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG   83 (568)
                      .+|+||||||+|||++.++   .+||+|||+++.... .......|++.|+|||++.+..++.++|+|||||++|+|++|
T Consensus       123 ~~ivH~dlkp~Nili~~~~---~~kL~Dfg~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g  198 (333)
T cd06650         123 HKIMHRDVKPSNILVNSRG---EIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIG  198 (333)
T ss_pred             CCEEecCCChhhEEEcCCC---CEEEeeCCcchhhhh-hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHC
Confidence            4799999999999998776   699999999976532 233456799999999999988899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHH--------------------------------------------HhccCCCCCCCcccccCHHH
Q 008370           84 KPPFDGSNQLQLFQNI--------------------------------------------LTSTELRFPPGAIEELHPDC  119 (568)
Q Consensus        84 ~~PF~g~~~~~~~~~I--------------------------------------------l~~~~~~~p~~~~~~ls~~~  119 (568)
                      +.||......+....+                                            .......+   .....+.++
T Consensus       199 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  275 (333)
T cd06650         199 RYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKL---PSGVFGAEF  275 (333)
T ss_pred             CCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccC---CCCCcCHHH
Confidence            9999865443322111                                            00000000   011346789


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370          120 VDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       120 ~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      .+|+.+||+.||.+|||++|++.|+||+..
T Consensus       276 ~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  305 (333)
T cd06650         276 QDFVNKCLIKNPAERADLKQLMVHAFIKRS  305 (333)
T ss_pred             HHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence            999999999999999999999999999754

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.87  E-value=2e-22  Score=209.94  Aligned_cols=135  Identities=28%  Similarity=0.463  Sum_probs=106.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++......   ......+++.|+|||++.+..++.++|||||||++
T Consensus       190 LH~~~ivHrDiKp~Nil~~~~~---~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il  266 (338)
T cd05102         190 LASRKCIHRDLAARNILLSENN---VVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLL  266 (338)
T ss_pred             HHHCCEECCCCccceEEEcCCC---cEEEeecccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHH
Confidence            3567999999999999998876   69999999998654322   12234566789999999988999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |||++ |..||.+....+.+...+... ....    +...++.+.+++.+||..||.+||++.++++
T Consensus       267 ~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         267 WEIFSLGASPYPGVQINEEFCQRLKDGTRMRA----PENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             HHHHhCCCCCCCCCCccHHHHHHHhcCCCCCC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            99997 999998765443333333322 2222    2356789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.87  E-value=1.3e-22  Score=201.89  Aligned_cols=143  Identities=27%  Similarity=0.481  Sum_probs=115.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC-----CccccCCCcccChhhhccC-CCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-----ADTLCGSPLYMAPEIIQNH-KYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~-----~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlG   74 (568)
                      ||..||+||||||+||+++.++   .+||+|||++..+.....     .....|+..|++||++... .++.++|+||||
T Consensus       118 lh~~~i~h~~l~p~ni~~~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG  194 (267)
T cd06610         118 LHSNGQIHRDIKAGNILLGEDG---SVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFG  194 (267)
T ss_pred             HHhCCeecCCCCHHhEEEcCCC---CEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHh
Confidence            3567999999999999999876   699999999876654321     2345689999999998766 788999999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCc-ccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGA-IEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~-~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|+|++|+.||...+....+..+.......++... ...+++.+.+++.+||..||.+||++++++.||||
T Consensus       195 ~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         195 ITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            9999999999999887776666666554332222211 13567899999999999999999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=5e-23  Score=220.57  Aligned_cols=140  Identities=30%  Similarity=0.495  Sum_probs=123.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc---cCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~---~~~ys~ksDIWSlGviL~   78 (568)
                      |.++.||||||+-|||+++.+   .|||+|||.|....+   ..+++|||+|||||++.   .+.|+.++||||||+++.
T Consensus       143 HS~~~IHRDiKAGNILLse~g---~VKLaDFGSAsi~~P---AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCI  216 (948)
T KOG0577|consen  143 HSHNRIHRDIKAGNILLSEPG---LVKLADFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI  216 (948)
T ss_pred             HHhhHHhhhccccceEecCCC---eeeeccccchhhcCc---hhcccCCccccchhHheeccccccCCccceeeccchhh
Confidence            567899999999999999887   899999999976543   57899999999999985   467999999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ||.-.++|+..++-...++.|..+..+.++..   ..+..+..|+..||++-|.+|||.++++.|+|+.+-+
T Consensus       217 ELAERkPPlFnMNAMSALYHIAQNesPtLqs~---eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~R  285 (948)
T KOG0577|consen  217 ELAERKPPLFNMNAMSALYHIAQNESPTLQSN---EWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRER  285 (948)
T ss_pred             hhhhcCCCccCchHHHHHHHHHhcCCCCCCCc---hhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCC
Confidence            99999999999999888999987766555543   5567899999999999999999999999999986533

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.87  E-value=2.2e-22  Score=206.44  Aligned_cols=144  Identities=29%  Similarity=0.506  Sum_probs=117.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+||+++.++   .+||+|||+++...... ......|++.|+|||.+.+..++.++|+|||||++|+|
T Consensus       132 H~~~i~H~dL~p~Nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~l  208 (296)
T cd06655         132 HANQVIHRDIKSDNVLLGMDG---SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM  208 (296)
T ss_pred             HHCCcccCCCCHHHEEECCCC---CEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHH
Confidence            556999999999999998776   69999999988655432 22345788999999999888899999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|+.||.+.+.......+.......  ...+..+++.+.++|.+||..+|.+||++.+++.||||....
T Consensus       209 ltg~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~  276 (296)
T cd06655         209 VEGEPPYLNENPLRALYLIATNGTPE--LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK  276 (296)
T ss_pred             HhCCCCCCCCCHHHHHHHHHhcCCcc--cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence            99999999887665554444332211  122346788999999999999999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.87  E-value=1.8e-22  Score=200.00  Aligned_cols=141  Identities=28%  Similarity=0.496  Sum_probs=112.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||+|+||+++.++   .+||+|||++....... ......|+..|++||++.+..++.++|||||||++|+
T Consensus       115 lh~~~i~H~dl~~~ni~~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~  191 (256)
T cd06612         115 LHSNKKIHRDIKAGNILLNEEG---QAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIE  191 (256)
T ss_pred             HHHCCcccCCCCcceEEECCCC---cEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHH
Confidence            3556999999999999999876   69999999998765433 2334568889999999988899999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|+.||...........+.......+  .....++..+.+++.+||..+|.+||++.+++.||||
T Consensus       192 l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         192 MAEGKPPYSDIHPMRAIFMIPNKPPPTL--SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HHhCCCCCCCcchhhhhhhhccCCCCCC--CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            9999999987665544433322211111  1223467789999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.87  E-value=2.6e-22  Score=203.13  Aligned_cols=144  Identities=25%  Similarity=0.427  Sum_probs=114.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhc-----cCCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~-----~~~ys~ksDIWSlG   74 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++..... .......|++.|+|||++.     ...++.++|+||+|
T Consensus       119 LH~~~i~H~dlkp~nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG  195 (282)
T cd06643         119 LHENKIIHRDLKAGNILFTLDG---DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG  195 (282)
T ss_pred             HHHCCeeecCCCcccEEEccCC---CEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHH
Confidence            3556999999999999998876   6999999998765432 2234567899999999984     44577899999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++|+|++|++||...+..+....+........  ..+..++..+.+||.+||..+|.+||+++++++||||...
T Consensus       196 vil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         196 ITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL--AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             HHHHHHccCCCCccccCHHHHHHHHhhcCCCCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence            999999999999998777666655544322211  1223567899999999999999999999999999998643

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=99.87  E-value=1.4e-23  Score=222.27  Aligned_cols=147  Identities=27%  Similarity=0.605  Sum_probs=131.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      +|..+|+|+||||+|||+.....-+.+||||||+||.++.....++++|||.|+|||+++.++|+..-|+||+|||+|--
T Consensus       680 LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVs  759 (888)
T KOG4236|consen  680 LHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVS  759 (888)
T ss_pred             hhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEE
Confidence            35679999999999999998877789999999999999988888899999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +.|..||....  ++..+| ++..+-+|+..|.++++.+.|||..+|+..-.+|.+.+..+.|||++...
T Consensus       760 LSGTFPFNEdE--dIndQI-QNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq  826 (888)
T KOG4236|consen  760 LSGTFPFNEDE--DINDQI-QNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ  826 (888)
T ss_pred             ecccccCCCcc--chhHHh-hccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence            99999997543  222333 34467789999999999999999999999999999999999999998753

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=2e-22  Score=202.83  Aligned_cols=144  Identities=28%  Similarity=0.516  Sum_probs=117.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||+|+||+++.++   .++|+|||+++.+... .......|++.|++||.+.+..++.++|+|||||++|+
T Consensus       114 lh~~~i~h~dl~p~ni~i~~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~  190 (274)
T cd06609         114 LHEEGKIHRDIKAANILLSEEG---DVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIE  190 (274)
T ss_pred             HHhCCcccCCCCHHHEEECCCC---CEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHH
Confidence            3557899999999999999876   6999999999877543 23345678889999999988889999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      |++|+.||...+.......+........+.   ..++.++.+++.+||..+|.+||+++++++||||....
T Consensus       191 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~  258 (274)
T cd06609         191 LAKGEPPLSDLHPMRVLFLIPKNNPPSLEG---NKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAK  258 (274)
T ss_pred             HHhCCCCcccCchHHHHHHhhhcCCCCCcc---cccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCC
Confidence            999999998777665555444432222221   12678999999999999999999999999999997654

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.87  E-value=2.9e-22  Score=210.50  Aligned_cols=146  Identities=25%  Similarity=0.445  Sum_probs=114.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      +|..||+||||||+||+++.++   .+||+|||+++............|++.|+|||.+.+..++.++||||+||++|+|
T Consensus       134 LH~~gi~H~dlkp~Nil~~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l  210 (353)
T cd07850         134 LHSAGIIHRDLKPSNIVVKSDC---TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM  210 (353)
T ss_pred             HHhCCeeeCCCCHHHEEECCCC---CEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHH
Confidence            3567999999999999999877   6999999999876554444556789999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCC-----------------------------------CCCC---cccccCHHHHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELR-----------------------------------FPPG---AIEELHPDCVDL  122 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~-----------------------------------~p~~---~~~~ls~~~~dL  122 (568)
                      ++|+.||.+.+....+..+......+                                   ++..   .....+..+.+|
T Consensus       211 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  290 (353)
T cd07850         211 IRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDL  290 (353)
T ss_pred             HHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHH
Confidence            99999998877555444443211000                                   0000   011235568999


Q ss_pred             HHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370          123 CRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       123 I~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +.+||+.||.+|||+.|++.||||...
T Consensus       291 i~~~L~~dP~~R~t~~eiL~~~~~~~~  317 (353)
T cd07850         291 LSKMLVIDPEKRISVDDALQHPYINVW  317 (353)
T ss_pred             HHHHcCCChhhCcCHHHHhcChhHhhc
Confidence            999999999999999999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.87  E-value=1.7e-22  Score=204.26  Aligned_cols=140  Identities=24%  Similarity=0.444  Sum_probs=110.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhc-----cCCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~-----~~~ys~ksDIWSlG   74 (568)
                      ||..+|+|+||||+||+++.++   .+||+|||+++..... .......|++.|+|||.+.     ...++.++|+||||
T Consensus       137 LH~~~ivH~dl~~~nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG  213 (282)
T cd06636         137 LHAHKVIHRDIKGQNVLLTENA---EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLG  213 (282)
T ss_pred             HHHCCcccCCCCHHHEEECCCC---CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHH
Confidence            3557999999999999999876   6999999998765422 2234567899999999885     34678899999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|+|++|..||...........+.......   .....++..+.+||.+||..||.+||++.|+++||||
T Consensus       214 ~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         214 ITAIEMAEGAPPLCDMHPMRALFLIPRNPPPK---LKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             HHHHHHHhCCCCccccCHHhhhhhHhhCCCCC---CcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            99999999999998766554444333222211   1223567899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.87  E-value=2.8e-22  Score=198.66  Aligned_cols=139  Identities=27%  Similarity=0.537  Sum_probs=116.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..+|+||||||+||+++.++  ..+||+|||+++............|+..|+|||.+.+..++.++|+||+|+++|+|+
T Consensus       118 h~~~i~h~dl~~~nil~~~~~--~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~  195 (256)
T cd08220         118 HTKLILHRDLKTQNILLDKHK--MVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELA  195 (256)
T ss_pred             HhCCeecCCCCHHHEEEcCCC--CEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHH
Confidence            456999999999999998654  268999999998876554445567899999999998888899999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      +|..||.+.+.......+.......++    ..+++++.+++.+||..+|.+|||+.|+++||||
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         196 SLKRAFEAANLPALVLKIMSGTFAPIS----DRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             hCCCCcccCchHHHHHHHHhcCCCCCC----CCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence            999999988776666666544332222    3578899999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=2.3e-22  Score=200.60  Aligned_cols=143  Identities=31%  Similarity=0.552  Sum_probs=118.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..+|+||||+|.||+++.++   .+||+|||+++....   .....|++.|++||.+.+..++.++|+||+|+++|+|+
T Consensus       114 H~~~i~H~dl~p~nil~~~~~---~~~l~dfg~~~~~~~---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~  187 (260)
T cd05611         114 HQRGIIHRDIKPENLLIDQTG---HLKLTDFGLSRNGLE---NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFL  187 (260)
T ss_pred             HHCCeecCCCCHHHeEECCCC---cEEEeecccceeccc---cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHH
Confidence            556999999999999998876   699999999876443   23456888999999998888899999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC---CHHHHHhchhHHHhHH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI---TFKEFFNHRFLGELRQ  151 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp---TaeElL~Hpff~~~~~  151 (568)
                      +|..||.+.+....+..+... ...++......+++.+.+++.+||..+|++||   +++|++.||||....|
T Consensus       188 ~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~  259 (260)
T cd05611         188 FGYPPFHAETPDAVFDNILSR-RINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINW  259 (260)
T ss_pred             HCCCCCCCCCHHHHHHHHHhc-ccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence            999999988877766655443 33344444446789999999999999999999   4579999999977654

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.87  E-value=1.3e-22  Score=206.22  Aligned_cols=145  Identities=24%  Similarity=0.435  Sum_probs=113.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc-cCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ-NHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~-~~~ys~ksDIWSlGviL~E   79 (568)
                      +|..+|+||||||+|||++.++   .+||+|||++....... .....|++.|+|||.+. +..++.++|+||+||++|+
T Consensus       113 lH~~~ivH~dikp~Nil~~~~~---~~~l~dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~  188 (279)
T cd05633         113 MHNRFVVYRDLKPANILLDEHG---HVRISDLGLACDFSKKK-PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFK  188 (279)
T ss_pred             HHHCCcCCCCCCHHHEEECCCC---CEEEccCCcceeccccC-ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHH
Confidence            3567899999999999998776   79999999997654322 23457899999999986 4568899999999999999


Q ss_pred             HHhCCCCCCCCcH--HHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHh
Q 008370           80 LVTGKPPFDGSNQ--LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQT  152 (568)
Q Consensus        80 LltG~~PF~g~~~--~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~  152 (568)
                      |++|..||.+...  .........    ..+...+..++.++.+++.+||..||.+|+     ++.++++||||+.+.+.
T Consensus       189 l~~g~~pf~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~~  264 (279)
T cd05633         189 LLRGHSPFRQHKTKDKHEIDRMTL----TVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDWQ  264 (279)
T ss_pred             HHhCCCCcCCCCCcCHHHHHHHhh----cCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCCHh
Confidence            9999999975432  122222211    122233346788999999999999999999     69999999999887654


Q ss_pred             h
Q 008370          153 V  153 (568)
Q Consensus       153 ~  153 (568)
                      .
T Consensus       265 ~  265 (279)
T cd05633         265 Q  265 (279)
T ss_pred             H
Confidence            4

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.87  E-value=3.6e-22  Score=197.90  Aligned_cols=137  Identities=28%  Similarity=0.524  Sum_probs=114.9

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC-CccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~-~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      ..+|+|+||||+||+++.++   .+||+|||+++....... .....|++.|++||++....++.++|+||||+++|+|+
T Consensus       128 ~~~i~h~dl~p~nili~~~~---~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~  204 (265)
T cd08217         128 GNTVLHRDLKPANIFLDANN---NVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELC  204 (265)
T ss_pred             cCcceecCCCHHHEEEecCC---CEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHH
Confidence            56899999999999999876   799999999987764432 44567899999999998888899999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      +|+.||.+.+.......+.......    .....+..+.+++.+||..+|.+||++.++++|||+
T Consensus       205 ~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         205 ALSPPFTARNQLQLASKIKEGKFRR----IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HCCCcccCcCHHHHHHHHhcCCCCC----CccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            9999999877655555554432222    234677899999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.87  E-value=2.8e-22  Score=205.41  Aligned_cols=144  Identities=28%  Similarity=0.496  Sum_probs=115.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++...... ......|++.|+|||.+.+..++.++|+|||||++|+
T Consensus       132 LH~~gi~H~dLkp~Nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~  208 (296)
T cd06654         132 LHSNQVIHRDIKSDNILLGMDG---SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE  208 (296)
T ss_pred             HHHCCcccCCCCHHHEEEcCCC---CEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHH
Confidence            4567999999999999998776   79999999987654332 2234578899999999988888999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++|+.||...........+.......  ...+..++..+.+++.+||..+|++||++.++++|+||...
T Consensus       209 l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         209 MIEGEPPYLNENPLRALYLIATNGTPE--LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             HHhCCCCCCCCCHHHhHHHHhcCCCCC--CCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence            999999998877655444333222111  11234677889999999999999999999999999999654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.87  E-value=4.4e-23  Score=212.71  Aligned_cols=147  Identities=29%  Similarity=0.475  Sum_probs=113.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCC-----------------CCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCC
Q 008370            1 MCYVFMIVSANACQNLLVSTNE-----------------VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK   63 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~-----------------~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~   63 (568)
                      ||..+|+|.||||+|||+..+.                 ....|||+|||.|+....  ...+.+.|..|.|||++.+.+
T Consensus       208 Lh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e--~hs~iVsTRHYRAPEViLgLG  285 (415)
T KOG0671|consen  208 LHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE--HHSTIVSTRHYRAPEVILGLG  285 (415)
T ss_pred             HHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceecc--CcceeeeccccCCchheeccC
Confidence            4667999999999999997643                 124689999999976443  336788999999999999999


Q ss_pred             CCcccchhhHHHHHHHHHhCCCCCCCCcHHH---HHHHHHhc-----------------cCCCCCCCcc-----------
Q 008370           64 YDAKADLWSVGAILFQLVTGKPPFDGSNQLQ---LFQNILTS-----------------TELRFPPGAI-----------  112 (568)
Q Consensus        64 ys~ksDIWSlGviL~ELltG~~PF~g~~~~~---~~~~Il~~-----------------~~~~~p~~~~-----------  112 (568)
                      ++.++||||+||||+|+.+|...|++.++.+   +.++|+..                 +.+.++....           
T Consensus       286 wS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~c  365 (415)
T KOG0671|consen  286 WSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPC  365 (415)
T ss_pred             cCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCC
Confidence            9999999999999999999999999876554   34444321                 0111111100           


Q ss_pred             ----------cccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370          113 ----------EELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       113 ----------~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                                +.....+.||+++||..||.+|+|+.|++.||||..+
T Consensus       366 kpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  366 KPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL  412 (415)
T ss_pred             ccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence                      1112367899999999999999999999999999765

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.87  E-value=2.8e-22  Score=202.16  Aligned_cols=143  Identities=24%  Similarity=0.476  Sum_probs=111.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhcc-CCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+||+++.++   .+||+|||++....... ......++..|+|||++.+ ..++.++|+||+||++|
T Consensus       116 LH~~~i~H~dl~p~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~  192 (286)
T cd07847         116 CHKHNCIHRDVKPENILITKQG---QIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFA  192 (286)
T ss_pred             HHHCCceecCCChhhEEEcCCC---cEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHH
Confidence            3567999999999999998876   79999999998765433 3334567889999999865 56788999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccC------------------CCCCCC--------cccccCHHHHHHHHHhhccCCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTE------------------LRFPPG--------AIEELHPDCVDLCRCLLRQNPV  132 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~------------------~~~p~~--------~~~~ls~~~~dLI~~cL~~dP~  132 (568)
                      +|++|.+||.+.+..+....+.....                  ...+..        ....++..+.+|+.+||..+|+
T Consensus       193 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  272 (286)
T cd07847         193 ELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPT  272 (286)
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCcc
Confidence            99999999998776554443322100                  001110        1134578899999999999999


Q ss_pred             CCCCHHHHHhchhH
Q 008370          133 ERITFKEFFNHRFL  146 (568)
Q Consensus       133 ~RpTaeElL~Hpff  146 (568)
                      +||++.|++.||||
T Consensus       273 ~Rp~~~eil~~~~f  286 (286)
T cd07847         273 ERLSCEELLEHPYF  286 (286)
T ss_pred             ccCCHHHHhcCCCC
Confidence            99999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.87  E-value=4.1e-22  Score=202.94  Aligned_cols=147  Identities=23%  Similarity=0.456  Sum_probs=115.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhc-----cCCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~-----~~~ys~ksDIWSlG   74 (568)
                      ||..+|+||||||+||+++.++   .+||+|||++...... .......|++.|+|||++.     ...++.++|+||||
T Consensus       126 lH~~~i~H~dlkp~Nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG  202 (292)
T cd06644         126 LHSMKIIHRDLKAGNVLLTLDG---DIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG  202 (292)
T ss_pred             HhcCCeeecCCCcceEEEcCCC---CEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHH
Confidence            4667999999999999998766   6999999998764332 2234456889999999884     34567889999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      |++|+|++|.+||...+......++........  .....++.++.+++.+||..+|++||+++++++||||..+.+.
T Consensus       203 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  278 (292)
T cd06644         203 ITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSN  278 (292)
T ss_pred             HHHHHHhcCCCCCccccHHHHHHHHhcCCCccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccccc
Confidence            999999999999987776555555543322111  1233567899999999999999999999999999999776543

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.87  E-value=4e-22  Score=201.28  Aligned_cols=136  Identities=24%  Similarity=0.406  Sum_probs=112.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++......   ......+++.|+|||.+.+..++.++|||||||++
T Consensus       140 lH~~~i~H~dlkp~Nil~~~~~---~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il  216 (283)
T cd05048         140 LSSHHFVHRDLAARNCLVGEGL---TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVL  216 (283)
T ss_pred             HHhCCeeccccccceEEEcCCC---cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHH
Confidence            4567999999999999998876   69999999998654322   22344567889999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |||++ |..||.+....+....+.......    .+..++..+.+|+.+||..||.+||++.+++++
T Consensus       217 ~el~~~g~~p~~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         217 WEIFSYGLQPYYGFSNQEVIEMIRSRQLLP----CPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCCcCC----CcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99998 999999888777776665443222    234678999999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.87  E-value=2.1e-22  Score=220.43  Aligned_cols=144  Identities=21%  Similarity=0.269  Sum_probs=106.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..|||||||||+|||++.++   .+||+|||+++......   .....+||+.|+|||++.+..++.++|||||||++
T Consensus       276 LH~~gIvHrDLKP~NILl~~~~---~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL  352 (461)
T PHA03211        276 IHGEGIIHRDIKTENVLVNGPE---DICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVI  352 (461)
T ss_pred             HHHCCEEECcCCHHHEEECCCC---CEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHH
Confidence            4667999999999999998776   69999999998754322   12346799999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCc-------HHHHHHHHHhccCC---CCCC------------------------Ccc---cccCHHHH
Q 008370           78 FQLVTGKPPFDGSN-------QLQLFQNILTSTEL---RFPP------------------------GAI---EELHPDCV  120 (568)
Q Consensus        78 ~ELltG~~PF~g~~-------~~~~~~~Il~~~~~---~~p~------------------------~~~---~~ls~~~~  120 (568)
                      |||++|..|+.+..       ....+.+++.....   .++.                        ..+   ..++.++.
T Consensus       353 ~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  432 (461)
T PHA03211        353 FEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVE  432 (461)
T ss_pred             HHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHH
Confidence            99999876553221       11122222221111   1110                        001   13456889


Q ss_pred             HHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370          121 DLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus       121 dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                      +||.+||..||.+|||+.|+|+||||+
T Consensus       433 dli~~mL~~DP~~RPsa~elL~hp~f~  459 (461)
T PHA03211        433 YLVCRALTFDGARRPSAAELLRLPLFQ  459 (461)
T ss_pred             HHHHHHcccChhhCcCHHHHhhCcccC
Confidence            999999999999999999999999995

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.87  E-value=3.1e-22  Score=200.12  Aligned_cols=139  Identities=29%  Similarity=0.493  Sum_probs=113.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-------CCccccCCCcccChhhhccCCCCcccchhhH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-------LADTLCGSPLYMAPEIIQNHKYDAKADLWSV   73 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-------~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSl   73 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++......       ......|+..|+|||.+.+..++.++|+||+
T Consensus       122 lH~~~ivH~di~p~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~sl  198 (267)
T cd06628         122 LHNRGIIHRDIKGANILVDNKG---GIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSL  198 (267)
T ss_pred             HHhcCcccccCCHHHEEEcCCC---CEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHH
Confidence            3567999999999999998776   69999999998765221       1123468889999999988889999999999


Q ss_pred             HHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           74 GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        74 GviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      ||++|+|++|+.||.+.+....+..+......    ..+..++..+.++|++||+.+|.+||++.++++||||
T Consensus       199 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         199 GCLVVEMLTGKHPFPDCTQLQAIFKIGENASP----EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             HHHHHHHhhCCCCCCCccHHHHHHHHhccCCC----cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            99999999999999887665555544432222    2334678899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.87  E-value=3.4e-22  Score=204.67  Aligned_cols=144  Identities=24%  Similarity=0.491  Sum_probs=115.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+||+++.++   .+||+|||++....... ......|++.|+|||.+.+..++.++|+||||+++|+
T Consensus       134 LH~~~ivH~dlkp~Nill~~~~---~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~e  210 (292)
T cd06658         134 LHNQGVIHRDIKSDSILLTSDG---RIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIE  210 (292)
T ss_pred             HHHCCEeecCCCHHHEEEcCCC---CEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHH
Confidence            3567999999999999998876   79999999987653222 2334578999999999988889999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++|+.||.+......+..+........+  .....+..+.+++.+||..+|.+|||++++++||||...
T Consensus       211 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~  278 (292)
T cd06658         211 MIDGEPPYFNEPPLQAMRRIRDNLPPRVK--DSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLA  278 (292)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhcCCCccc--cccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhcc
Confidence            99999999987766655544432222211  122467889999999999999999999999999999654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.87  E-value=3.8e-22  Score=201.05  Aligned_cols=143  Identities=28%  Similarity=0.496  Sum_probs=115.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..+|+|+||||+||+++.++   .+||+|||++.............++..|+|||++.+..++.++|+|||||++|+|
T Consensus       123 LH~~~i~h~~l~~~nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l  199 (287)
T cd07838         123 LHSHRIVHRDLKPQNILVTSDG---QVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAEL  199 (287)
T ss_pred             HHHCCeeeccCChhhEEEccCC---CEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHH
Confidence            3557999999999999999886   7999999999887655444455688899999999988899999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCC----C-----------CC-------CCcccccCHHHHHHHHHhhccCCCCCCCHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTEL----R-----------FP-------PGAIEELHPDCVDLCRCLLRQNPVERITFK  138 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~----~-----------~p-------~~~~~~ls~~~~dLI~~cL~~dP~~RpTae  138 (568)
                      ++|.+||.+....+.+.++......    .           ++       ......+++.+.+++.+||..||.+||+++
T Consensus       200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~  279 (287)
T cd07838         200 FRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAF  279 (287)
T ss_pred             HhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHH
Confidence            9999999988877766666542110    0           00       011123457788999999999999999999


Q ss_pred             HHHhchhH
Q 008370          139 EFFNHRFL  146 (568)
Q Consensus       139 ElL~Hpff  146 (568)
                      +++.||||
T Consensus       280 ~il~~~~~  287 (287)
T cd07838         280 EALQHPYF  287 (287)
T ss_pred             HHhcCcCC
Confidence            99999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.87  E-value=2.5e-22  Score=202.69  Aligned_cols=143  Identities=29%  Similarity=0.503  Sum_probs=109.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhcc-CCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++...... ......+++.|+|||++.+ ..++.++|+|||||++|
T Consensus       117 lH~~~i~H~dl~p~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~  193 (285)
T cd07861         117 CHSRRVLHRDLKPQNLLIDNKG---VIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFA  193 (285)
T ss_pred             HHhCCeeecCCCHHHEEEcCCC---cEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHH
Confidence            3567999999999999998876   69999999997654322 2234467889999998865 45788999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCC-----------------CCC-------CCcccccCHHHHHHHHHhhccCCCCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTEL-----------------RFP-------PGAIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~-----------------~~p-------~~~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      +|++|++||.+.........+......                 .++       ......+++++.++|++||..||.+|
T Consensus       194 ~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R  273 (285)
T cd07861         194 EMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKR  273 (285)
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhC
Confidence            999999999887654433332211000                 000       01123467889999999999999999


Q ss_pred             CCHHHHHhchhH
Q 008370          135 ITFKEFFNHRFL  146 (568)
Q Consensus       135 pTaeElL~Hpff  146 (568)
                      ||+.+++.||||
T Consensus       274 pt~~~ll~~~~~  285 (285)
T cd07861         274 ISAKKALNHPYF  285 (285)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.87  E-value=3.7e-22  Score=202.88  Aligned_cols=142  Identities=25%  Similarity=0.400  Sum_probs=112.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccC-----CCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNH-----KYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~-----~ys~ksDIWSlG   74 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++...... ......|+..|+|||++...     .++.++|+||+|
T Consensus       144 lH~~~ivH~dlkp~nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG  220 (291)
T cd06639         144 LHNNRIIHRDVKGNNILLTTEG---GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLG  220 (291)
T ss_pred             HHhCCeeccCCCHHHEEEcCCC---CEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHH
Confidence            3567999999999999998876   69999999988654332 22345788999999998543     367899999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                      |++|+|++|+.||........+..+.........  ........+.+|+.+||..+|++||++.++++||||+
T Consensus       221 vi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         221 ITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLL--HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCC--cccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            9999999999999887766555555433222111  1234567899999999999999999999999999983

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.87  E-value=2.9e-22  Score=199.90  Aligned_cols=142  Identities=32%  Similarity=0.570  Sum_probs=112.9

Q ss_pred             CCC-CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCY-VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~-~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||. .+|+|+||||+||+++.++   .+||+|||.+....... .....|+..|++||.+.+..++.++|+||+||++|+
T Consensus       116 lH~~~~i~H~dl~~~ni~~~~~~---~~~l~d~g~~~~~~~~~-~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~  191 (265)
T cd06605         116 LHEKHKIIHRDVKPSNILVNSRG---QIKLCDFGVSGQLVNSL-AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIE  191 (265)
T ss_pred             HcCCCCeecCCCCHHHEEECCCC---CEEEeecccchhhHHHH-hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHH
Confidence            356 7999999999999999876   69999999987654322 122678889999999988899999999999999999


Q ss_pred             HHhCCCCCCCC-----cHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           80 LVTGKPPFDGS-----NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        80 LltG~~PF~g~-----~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++|..||...     ...+....+........+.   ..++..+.++|.+||..+|.+|||+.+++.||||+..
T Consensus       192 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         192 LATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPS---GKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             HHhCCCCCCccccccccHHHHHHHHhcCCCCCCCh---hhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence            99999999754     2333344444332222222   1278899999999999999999999999999999654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=4.9e-22  Score=204.62  Aligned_cols=146  Identities=25%  Similarity=0.512  Sum_probs=118.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC------------------------------CCccccCCC
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD------------------------------LADTLCGSP   51 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~------------------------------~~~t~~GT~   51 (568)
                      |..||+||||||+||+++.++   .+||+|||++.......                              ......|+.
T Consensus       120 H~~~i~H~dlkp~Nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  196 (316)
T cd05574         120 HLLGIVYRDLKPENILLHESG---HIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTE  196 (316)
T ss_pred             HHCCeeccCCChHHeEEcCCC---CEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCcc
Confidence            556999999999999999876   69999999987543211                              112346888


Q ss_pred             cccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCC
Q 008370           52 LYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP  131 (568)
Q Consensus        52 ~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP  131 (568)
                      .|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..+... ...++..  ..++..+.+++.+||..+|
T Consensus       197 ~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~li~~~l~~~p  273 (316)
T cd05574         197 EYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKK-EVTFPGS--PPVSSSARDLIRKLLVKDP  273 (316)
T ss_pred             CCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcC-CccCCCc--cccCHHHHHHHHHHccCCH
Confidence            999999999888999999999999999999999999988877777666543 2223321  2368899999999999999


Q ss_pred             CCCCC----HHHHHhchhHHHhHHhh
Q 008370          132 VERIT----FKEFFNHRFLGELRQTV  153 (568)
Q Consensus       132 ~~RpT----aeElL~Hpff~~~~~~~  153 (568)
                      ++||+    ++++++||||....+..
T Consensus       274 ~~R~s~~~~~~~ll~~~~~~~~~~~~  299 (316)
T cd05574         274 SKRLGSKRGAAEIKQHPFFRGVNWAL  299 (316)
T ss_pred             hHCCCchhhHHHHHcCchhhcCChhh
Confidence            99999    99999999998776553

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.87  E-value=2.9e-22  Score=202.97  Aligned_cols=142  Identities=27%  Similarity=0.507  Sum_probs=112.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+|+||||+|||++.++   .+||+|||++...... .....+|+..|+|||++.+..++.++|+|||||++|+|
T Consensus       111 lH~~~i~H~dlkp~Nill~~~~---~~~l~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l  186 (279)
T cd06619         111 LWSLKILHRDVKPSNMLVNTRG---QVKLCDFGVSTQLVNS-IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMEL  186 (279)
T ss_pred             HHHCCEeeCCCCHHHEEECCCC---CEEEeeCCcceecccc-cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHH
Confidence            3567999999999999999876   7999999999865432 33456899999999999888899999999999999999


Q ss_pred             HhCCCCCCCCcH-------HHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VTGKPPFDGSNQ-------LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 ltG~~PF~g~~~-------~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++|+.||.....       ......+........+   ....++++.+++.+||+.+|.+||+++++++||||...
T Consensus       187 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         187 ALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLP---VGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             HhCCCCchhhcccccccchHHHHHHHhccCCCCCC---CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccccc
Confidence            999999965321       1222222222111111   23467899999999999999999999999999999654

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.87  E-value=3e-22  Score=202.33  Aligned_cols=142  Identities=26%  Similarity=0.440  Sum_probs=106.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccC-CCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+||+++.++   .+||+|||+++..... .......+++.|+|||++.+. .++.++||||+||++|+
T Consensus       116 H~~~i~H~dl~~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~  192 (284)
T cd07839         116 HSHNVLHRDLKPQNLLINKNG---ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE  192 (284)
T ss_pred             HHCCEecCCCCHHHEEEcCCC---cEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHH
Confidence            557999999999999999876   6999999999865432 223345678899999998664 47889999999999999


Q ss_pred             HHhCCCCC-CCCcHHHHHHHHHhccC---------------C-CC---CC-----CcccccCHHHHHHHHHhhccCCCCC
Q 008370           80 LVTGKPPF-DGSNQLQLFQNILTSTE---------------L-RF---PP-----GAIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        80 LltG~~PF-~g~~~~~~~~~Il~~~~---------------~-~~---p~-----~~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      |++|..|| .+.+..+.+..+.....               . .+   +.     .....+++++.+|+++||..||.+|
T Consensus       193 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  272 (284)
T cd07839         193 LANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQR  272 (284)
T ss_pred             HHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhc
Confidence            99988875 44444444333321100               0 00   00     0112467889999999999999999


Q ss_pred             CCHHHHHhchhH
Q 008370          135 ITFKEFFNHRFL  146 (568)
Q Consensus       135 pTaeElL~Hpff  146 (568)
                      ||+++++.||||
T Consensus       273 ~t~~~il~h~~f  284 (284)
T cd07839         273 ISAEEALQHPYF  284 (284)
T ss_pred             CCHHHHhcCCCC
Confidence            999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.87  E-value=3.3e-22  Score=202.05  Aligned_cols=149  Identities=23%  Similarity=0.464  Sum_probs=116.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+||+++.++   .+||+|||++.............|+..|++||++.+..++.++|+||+||++|+|
T Consensus       111 lH~~~i~H~di~p~Nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l  187 (277)
T cd05577         111 LHQRRIVYRDLKPENVLLDDHG---NVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEM  187 (277)
T ss_pred             HHhCCcccCCCCHHHEEECCCC---CEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHH
Confidence            3567999999999999998876   6999999999776544344455678899999999888899999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQTV  153 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~~  153 (568)
                      ++|+.||.+.........+... ....+...+..+++.+.++|.+||+.+|.+||     ++.+++.||||..+.+..
T Consensus       188 ~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~~~~  264 (277)
T cd05577         188 IAGRSPFRQRKEKVEKEELKRR-TLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLNWRR  264 (277)
T ss_pred             hhCCCCCCCCcccccHHHHHhc-cccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCChhh
Confidence            9999999875432112222211 11122233346789999999999999999999     889999999998876653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.87  E-value=5.1e-22  Score=200.30  Aligned_cols=143  Identities=28%  Similarity=0.477  Sum_probs=112.3

Q ss_pred             CCC-CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc----CCCCcccchhhHHHH
Q 008370            2 CYV-FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN----HKYDAKADLWSVGAI   76 (568)
Q Consensus         2 ~~~-~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~----~~ys~ksDIWSlGvi   76 (568)
                      |.. +|+||||||+||+++.++   .+||+|||+++............|+..|+|||.+.+    ..++.++|+||+||+
T Consensus       120 H~~~~i~h~dlkp~nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~  196 (283)
T cd06617         120 HSKLSVIHRDVKPSNVLINRNG---QVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGIT  196 (283)
T ss_pred             hhcCCeecCCCCHHHEEECCCC---CEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHH
Confidence            443 899999999999998876   699999999987654333334578899999998854    457889999999999


Q ss_pred             HHHHHhCCCCCCCC-cHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           77 LFQLVTGKPPFDGS-NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        77 L~ELltG~~PF~g~-~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +|+|++|+.||... ...+.+..+.......++.   ..++.++.+++.+||..+|.+||++.+++.||||....
T Consensus       197 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  268 (283)
T cd06617         197 MIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPA---EKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL  268 (283)
T ss_pred             HHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCc---cccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence            99999999999743 3334444444332333322   24678999999999999999999999999999997754

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=3.7e-22  Score=198.42  Aligned_cols=142  Identities=25%  Similarity=0.377  Sum_probs=111.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccC---CCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNH---KYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~---~ys~ksDIWSlGvi   76 (568)
                      ||..+|+|+||||+||+++.++   .+||+|||++....... ......|+..|++||.+...   .++.++|+||+||+
T Consensus       117 lh~~~i~h~dl~p~ni~i~~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~  193 (262)
T cd06613         117 LHETGKIHRDIKGANILLTEDG---DVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGIT  193 (262)
T ss_pred             HHhCCceecCCChhhEEECCCC---CEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHH
Confidence            4567999999999999999876   69999999987654322 23446788899999998776   78899999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchh
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF  145 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpf  145 (568)
                      +|+|++|+.||.+.........+................+.++.+++.+||..+|.+||++.+++.|+|
T Consensus       194 l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         194 AIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            999999999998877655544443321111111122345678999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.87  E-value=3.4e-22  Score=201.21  Aligned_cols=141  Identities=27%  Similarity=0.486  Sum_probs=110.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~EL   80 (568)
                      |..+|+||||||+||+++. +   .+||+|||+++.+..........+++.|+|||.+.. ..++.++|+||+||++|+|
T Consensus       117 H~~~i~H~dl~p~ni~l~~-~---~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el  192 (282)
T cd07831         117 HRNGIFHRDIKPENILIKD-D---ILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEI  192 (282)
T ss_pred             HHCCceecccCHHHEEEcC-C---CeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHH
Confidence            4569999999999999998 4   799999999987655444445678899999998754 4568899999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhcc-----------------CCCCCCCc-------ccccCHHHHHHHHHhhccCCCCCCC
Q 008370           81 VTGKPPFDGSNQLQLFQNILTST-----------------ELRFPPGA-------IEELHPDCVDLCRCLLRQNPVERIT  136 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~-----------------~~~~p~~~-------~~~ls~~~~dLI~~cL~~dP~~RpT  136 (568)
                      ++|.+||.+.+..+.+..+....                 ...++...       ...++..+.+++.+||..+|.+||+
T Consensus       193 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~  272 (282)
T cd07831         193 LSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERIT  272 (282)
T ss_pred             HcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccC
Confidence            99999999887665544443211                 11111111       1245788999999999999999999


Q ss_pred             HHHHHhchhH
Q 008370          137 FKEFFNHRFL  146 (568)
Q Consensus       137 aeElL~Hpff  146 (568)
                      ++++++||||
T Consensus       273 ~~~~l~~~~~  282 (282)
T cd07831         273 AKQALRHPYF  282 (282)
T ss_pred             HHHHhhCCCC
Confidence            9999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>PHA02988 hypothetical protein; Provisional

Probab=99.86  E-value=4.9e-22  Score=202.92  Aligned_cols=130  Identities=20%  Similarity=0.360  Sum_probs=108.4

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc--CCCCcccchhhHHHHHHHHH
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN--HKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~--~~ys~ksDIWSlGviL~ELl   81 (568)
                      .+++||||||+|||++.++   .+||+|||+++.+....  ....|++.|+|||++.+  ..|+.++|||||||++|||+
T Consensus       142 ~~~~Hrdlkp~nill~~~~---~~kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~  216 (283)
T PHA02988        142 TNKPYKNLTSVSFLVTENY---KLKIICHGLEKILSSPP--FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIF  216 (283)
T ss_pred             CCCCCCcCChhhEEECCCC---cEEEcccchHhhhcccc--ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHH
Confidence            5889999999999999877   79999999998654322  24568899999999976  68899999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           82 TGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|+.||.+.+..+.+..+.... ...+|    ...++.+.+|+.+||+.||.+|||+.++++
T Consensus       217 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        217 TGKIPFENLTTKEIYDLIINKNNSLKLP----LDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             HCCCCCCCCCHHHHHHHHHhcCCCCCCC----CcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            9999999888777777665432 22222    256789999999999999999999999964

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.86  E-value=4.9e-22  Score=198.44  Aligned_cols=143  Identities=36%  Similarity=0.696  Sum_probs=118.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..+++|+||||+||+++.++   .+||+|||+++............|++.|++||.+....++.++|+|++|+++|+|+
T Consensus       110 H~~~~~h~dl~~~nilv~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~  186 (262)
T cd05572         110 HNRGIIYRDLKPENLLLDSNG---YVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELL  186 (262)
T ss_pred             hhCCcccCCCCHHHEEEcCCC---CEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHH
Confidence            556999999999999998876   69999999998776544444567899999999998888999999999999999999


Q ss_pred             hCCCCCCCCc--HHHHHHHHHhc-cCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHH
Q 008370           82 TGKPPFDGSN--QLQLFQNILTS-TELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQ  151 (568)
Q Consensus        82 tG~~PF~g~~--~~~~~~~Il~~-~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~  151 (568)
                      +|..||....  ..+.+..+... ....+|    ...+..+.+++.+||..+|.+||+     ++|+++||||....+
T Consensus       187 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  260 (262)
T cd05572         187 TGRPPFGEDDEDPMEIYNDILKGNGKLEFP----NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDW  260 (262)
T ss_pred             hCCCCcCCCCCCHHHHHHHHhccCCCCCCC----cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCC
Confidence            9999998776  55566655532 222233    244789999999999999999999     999999999986644

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.86  E-value=4e-22  Score=206.48  Aligned_cols=148  Identities=30%  Similarity=0.487  Sum_probs=118.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccC-CCCcccchhhHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGA   75 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGv   75 (568)
                      ||..||+||||||+|||++.++   .+||+|||++.......    ......+++.|+|||++.+. .++.++|+||+||
T Consensus       119 LH~~gi~H~dlkp~nili~~~~---~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~  195 (330)
T cd07834         119 LHSANVIHRDLKPSNILVNSNC---DLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGC  195 (330)
T ss_pred             HHhCCeecCCCCHHHEEEcCCC---CEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHH
Confidence            3567999999999999999876   79999999998765442    23445688999999999877 7899999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCC--------------------------CcccccCHHHHHHHHHhhcc
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPP--------------------------GAIEELHPDCVDLCRCLLRQ  129 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~--------------------------~~~~~ls~~~~dLI~~cL~~  129 (568)
                      ++|+|++|++||.+.+..+.+..+........+.                          .....+++.+.+|+.+||..
T Consensus       196 il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  275 (330)
T cd07834         196 IFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVF  275 (330)
T ss_pred             HHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccC
Confidence            9999999999999888766666554421110000                          01123578899999999999


Q ss_pred             CCCCCCCHHHHHhchhHHHhHH
Q 008370          130 NPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       130 dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      +|.+||+++++++||||.....
T Consensus       276 ~P~~Rpt~~~ll~~~~~~~~~~  297 (330)
T cd07834         276 DPKKRITADEALAHPYLAQLHD  297 (330)
T ss_pred             ChhhCCCHHHHHhCccHHhhcc
Confidence            9999999999999999987654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.86  E-value=4.2e-22  Score=220.30  Aligned_cols=146  Identities=18%  Similarity=0.225  Sum_probs=108.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..|||||||||+|||++.++   .+||+|||+++.+....  .....+||+.|+|||++.+..|+.++|||||||++|
T Consensus       283 LH~~gIiHrDLKP~NILl~~~~---~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~  359 (501)
T PHA03210        283 IHDKKLIHRDIKLENIFLNCDG---KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILL  359 (501)
T ss_pred             HHhCCeecCCCCHHHEEECCCC---CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHH
Confidence            3567999999999999998876   69999999998765432  223468999999999999999999999999999999


Q ss_pred             HHHhCCCC-CCCC--cHHHHHHHHHhccC---CCCCCC----------------------c--ccccCHHHHHHHHHhhc
Q 008370           79 QLVTGKPP-FDGS--NQLQLFQNILTSTE---LRFPPG----------------------A--IEELHPDCVDLCRCLLR  128 (568)
Q Consensus        79 ELltG~~P-F~g~--~~~~~~~~Il~~~~---~~~p~~----------------------~--~~~ls~~~~dLI~~cL~  128 (568)
                      ||++|..+ |.+.  .....+.+++....   ..+|..                      .  ...++.++.+++.+||.
T Consensus       360 ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~  439 (501)
T PHA03210        360 DMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLT  439 (501)
T ss_pred             HHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhc
Confidence            99998754 4322  22222322222110   011100                      0  01245677888999999


Q ss_pred             cCCCCCCCHHHHHhchhHHHh
Q 008370          129 QNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       129 ~dP~~RpTaeElL~Hpff~~~  149 (568)
                      .||.+|||+.|++.||||...
T Consensus       440 ~DP~~Rpsa~elL~hp~f~~~  460 (501)
T PHA03210        440 FDWHLRPGAAELLALPLFSAE  460 (501)
T ss_pred             cCcccCcCHHHHhhChhhhcC
Confidence            999999999999999999764

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.86  E-value=1.4e-22  Score=200.85  Aligned_cols=142  Identities=32%  Similarity=0.573  Sum_probs=110.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceec-CCCCCCccccCCCcccChhhhc-cCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQ-NHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l-~~~~~~~t~~GT~~YmAPEvl~-~~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+|+||||+||+++.++   .+||+|||.+... ..........+++.|+|||++. +..++.++|+||+|+++|
T Consensus       114 Lh~~~i~H~dikp~NIl~~~~~---~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~  190 (260)
T PF00069_consen  114 LHSKGIVHRDIKPENILLDENG---EVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILY  190 (260)
T ss_dssp             HHHTTEEESSBSGGGEEESTTS---EEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            3456999999999999999766   6899999999864 2233445677899999999998 788899999999999999


Q ss_pred             HHHhCCCCCCCCc---HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           79 QLVTGKPPFDGSN---QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        79 ELltG~~PF~g~~---~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      +|++|..||...+   ....+....... ..............+.+++.+||..||.+||++.++++||||
T Consensus       191 ~l~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  191 ELLTGKLPFEESNSDDQLEIIEKILKRP-LPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HHHHSSSSSTTSSHHHHHHHHHHHHHTH-HHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             cccccccccccccchhhhhhhhhccccc-ccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence            9999999999873   333333332211 110111111224799999999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.86  E-value=5.3e-22  Score=199.15  Aligned_cols=140  Identities=24%  Similarity=0.434  Sum_probs=110.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC----CCCccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ----DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~----~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.+...    .......|+..|+|||.+.+..++.++|+||+||+
T Consensus       122 LH~~~i~H~~l~p~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  198 (266)
T cd06651         122 LHSNMIVHRDIKGANILRDSAG---NVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCT  198 (266)
T ss_pred             HHhCCeeeCCCCHHHEEECCCC---CEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHH
Confidence            4667999999999999998776   6999999999765321    11233568889999999988889999999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                      +|+|++|+.||...........+....   ..+..+..+.+.+.+++ +||..+|++||+++|+++||||+
T Consensus       199 ~~el~~g~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         199 VVEMLTEKPPWAEYEAMAAIFKIATQP---TNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             HHHHHHCCCCccccchHHHHHHHhcCC---CCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence            999999999998776555444433221   12233345678888998 67778999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.86  E-value=5.2e-22  Score=198.79  Aligned_cols=142  Identities=21%  Similarity=0.341  Sum_probs=107.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhc---cCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~---~~~ys~ksDIWSlGvi   76 (568)
                      ||..||+|+||||+||+++.++   .+||+|||++....... ......|++.|+|||++.   ...++.++|+||+||+
T Consensus       122 lH~~~i~H~dlkp~nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~i  198 (267)
T cd06645         122 LHSKGKMHRDIKGANILLTDNG---HVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGIT  198 (267)
T ss_pred             HHHCCeecCCCCHHHEEECCCC---CEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHH
Confidence            3556999999999999998776   69999999987654322 223457899999999974   4568889999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchh
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF  145 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpf  145 (568)
                      +|+|++|..||...........................++..+.+++.+||..+|.+||+++++++|||
T Consensus       199 l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         199 AIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             HHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence            999999999997665444333332221111111111245678999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.86  E-value=1.8e-22  Score=217.50  Aligned_cols=146  Identities=25%  Similarity=0.459  Sum_probs=117.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC---CC------------------------C------------
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT---PQ------------------------D------------   42 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~---~~------------------------~------------   42 (568)
                      |.+|+|||||||+||||+.+|   +|||+|||||.-+.   +.                        .            
T Consensus       746 HkmGFIHRDiKPDNILIDrdG---HIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~  822 (1034)
T KOG0608|consen  746 HKMGFIHRDIKPDNILIDRDG---HIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQ  822 (1034)
T ss_pred             HhccceecccCccceEEccCC---ceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhh
Confidence            567999999999999999998   89999999985321   00                        0            


Q ss_pred             ----CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCH
Q 008370           43 ----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHP  117 (568)
Q Consensus        43 ----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~  117 (568)
                          .....+||+.|+|||++...+|+..||+||.|||||||+.|++||....+.++-.+++... -+.++..  .++++
T Consensus       823 h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~--~~ls~  900 (1034)
T KOG0608|consen  823 HQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQ--GNLSK  900 (1034)
T ss_pred             hhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccc--cccCH
Confidence                1123579999999999999999999999999999999999999999887776666665443 2334433  47899


Q ss_pred             HHHHHHHHhhccCCCCCCC---HHHHHhchhHHHhHHhh
Q 008370          118 DCVDLCRCLLRQNPVERIT---FKEFFNHRFLGELRQTV  153 (568)
Q Consensus       118 ~~~dLI~~cL~~dP~~RpT---aeElL~Hpff~~~~~~~  153 (568)
                      +|.+||.+++ .+++.|+.   +++|..||||+.+....
T Consensus       901 e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDfss  938 (1034)
T KOG0608|consen  901 EALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDFSS  938 (1034)
T ss_pred             HHHHHHHHHh-cChhhhhcccchhhhhcCccccccchHh
Confidence            9999998854 46788874   77899999999887654

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.86  E-value=4.9e-22  Score=204.21  Aligned_cols=146  Identities=27%  Similarity=0.423  Sum_probs=113.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhcc-CCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~   78 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++...... ......+++.|+|||++.+ ..++.++|+||+||++|
T Consensus       124 lH~~~i~H~dl~p~nil~~~~~---~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~  200 (309)
T cd07845         124 LHENFIIHRDLKVSNLLLTDKG---CLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILA  200 (309)
T ss_pred             HHhCCeecCCCCHHHEEECCCC---CEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHH
Confidence            3567999999999999998876   69999999998765432 2223345788999999865 56788999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCC------------------CCCCC-------cccccCHHHHHHHHHhhccCCCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTEL------------------RFPPG-------AIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~------------------~~p~~-------~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      +|++|++||.+.+..+.+..+......                  ..+..       .....++.+.+||.+||..||.+
T Consensus       201 el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~  280 (309)
T cd07845         201 ELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKK  280 (309)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhh
Confidence            999999999988877776655542110                  00000       01224788899999999999999


Q ss_pred             CCCHHHHHhchhHHHh
Q 008370          134 RITFKEFFNHRFLGEL  149 (568)
Q Consensus       134 RpTaeElL~Hpff~~~  149 (568)
                      |||+++++.||||.+.
T Consensus       281 R~t~~~il~h~~f~~~  296 (309)
T cd07845         281 RATAEEALESSYFKEK  296 (309)
T ss_pred             CcCHHHHhcChhhccC
Confidence            9999999999999643

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.86  E-value=8.5e-22  Score=200.65  Aligned_cols=144  Identities=32%  Similarity=0.661  Sum_probs=120.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||+|.|||++.++   .+||+|||+++.....  ....+|++.|+|||.+.+..++.++|+||||+++|+|
T Consensus       117 lH~~~i~H~dl~p~nili~~~~---~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  191 (290)
T cd05580         117 LHSLDIVYRDLKPENLLLDSDG---YIKITDFGFAKRVKGR--TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEM  191 (290)
T ss_pred             HHHCCEecCCCCHHHEEECCCC---CEEEeeCCCccccCCC--CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHH
Confidence            3567999999999999998876   6999999999876543  3456789999999999888888999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~~~  154 (568)
                      ++|+.||...........+... ...+|    ..++..+.+++.+||..+|.+|+     +++++++||||..+.+...
T Consensus       192 ~~g~~p~~~~~~~~~~~~~~~~-~~~~~----~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~~~  265 (290)
T cd05580         192 LAGYPPFFDDNPIQIYEKILEG-KVRFP----SFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGIDWIAL  265 (290)
T ss_pred             HhCCCCCCCCCHHHHHHHHhcC-CccCC----ccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCCHHHH
Confidence            9999999887766666665533 33333    34588999999999999999999     9999999999988776543

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.86  E-value=1.1e-21  Score=197.91  Aligned_cols=145  Identities=29%  Similarity=0.511  Sum_probs=116.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+|+||+|+||+++.++   .+||+|||+++.+.... ......|+..|+|||++.+..++.++|+|||||++|+
T Consensus       117 lH~~~ivH~dl~p~ni~i~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e  193 (277)
T cd06642         117 LHSERKIHRDIKAANVLLSEQG---DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIE  193 (277)
T ss_pred             HhcCCeeccCCChheEEEeCCC---CEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHH
Confidence            4567999999999999998876   69999999998765432 2234568889999999998889999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      |++|+.||...........+....    ++......+..+.+++.+||..+|.+||++.++++||||......
T Consensus       194 l~tg~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~  262 (277)
T cd06642         194 LAKGEPPNSDLHPMRVLFLIPKNS----PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKK  262 (277)
T ss_pred             HHhCCCCCcccchhhHHhhhhcCC----CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHhhh
Confidence            999999998766555444332221    222223567889999999999999999999999999999876543

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.86  E-value=6.5e-22  Score=197.48  Aligned_cols=141  Identities=28%  Similarity=0.460  Sum_probs=111.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-----CCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-----HKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-----~~ys~ksDIWSlG   74 (568)
                      ||..+|+||||+|+||+++.++   .+||+|||++...... .......|++.|+|||++..     ..++.++||||||
T Consensus       129 lH~~~i~H~~l~p~ni~~~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG  205 (275)
T cd06608         129 LHENKVIHRDIKGQNILLTKNA---EVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLG  205 (275)
T ss_pred             HhcCCcccCCCCHHHEEEccCC---eEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhH
Confidence            4677999999999999999876   6999999998765432 22345678999999998853     3467889999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|+|++|..||...........+.........  .....+..+.+|+.+||..||.+|||++++++|||+
T Consensus       206 ~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         206 ITAIELADGKPPLCDMHPMRALFKIPRNPPPTLK--SPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHHHHHHhCCCCccccchHHHHHHhhccCCCCCC--chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            9999999999999876665555555443222211  112367789999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.86  E-value=3.6e-22  Score=201.74  Aligned_cols=151  Identities=26%  Similarity=0.470  Sum_probs=123.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--------CCccccCCCcccChhhhc-----cCCCCcc
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--------LADTLCGSPLYMAPEIIQ-----NHKYDAK   67 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--------~~~t~~GT~~YmAPEvl~-----~~~ys~k   67 (568)
                      ||..||.||||||+|||-...+.-.-||||||.+..-+.-+.        ...+.+|+..|||||++.     ...|+.+
T Consensus       192 lH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKr  271 (463)
T KOG0607|consen  192 LHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKR  271 (463)
T ss_pred             HhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhcccccccccc
Confidence            677899999999999998766543458999999875432111        234578999999999872     3468999


Q ss_pred             cchhhHHHHHHHHHhCCCCCCCCc---------------HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCC
Q 008370           68 ADLWSVGAILFQLVTGKPPFDGSN---------------QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV  132 (568)
Q Consensus        68 sDIWSlGviL~ELltG~~PF~g~~---------------~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~  132 (568)
                      +|.||||||+|-|+.|.+||.|.-               ...++..| +.+.+.||...|..++.+.++++..+|.+++.
T Consensus       272 CDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesI-QEGkYeFPdkdWahIS~eakdlisnLlvrda~  350 (463)
T KOG0607|consen  272 CDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESI-QEGKYEFPDKDWAHISSEAKDLISNLLVRDAK  350 (463)
T ss_pred             ccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHH-hccCCcCChhhhHHhhHHHHHHHHHHHhccHH
Confidence            999999999999999999997641               22344444 45688999999999999999999999999999


Q ss_pred             CCCCHHHHHhchhHHHhHHh
Q 008370          133 ERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus       133 ~RpTaeElL~Hpff~~~~~~  152 (568)
                      +|.++.++++|||++....+
T Consensus       351 ~rlsa~~vlnhPw~~~~~~e  370 (463)
T KOG0607|consen  351 QRLSAAQVLNHPWVQRCAPE  370 (463)
T ss_pred             hhhhhhhccCCccccccchh
Confidence            99999999999999877654

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.86  E-value=1.2e-21  Score=198.46  Aligned_cols=143  Identities=27%  Similarity=0.462  Sum_probs=111.1

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccC------CCCcccchhhHHHHH
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH------KYDAKADLWSVGAIL   77 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~------~ys~ksDIWSlGviL   77 (568)
                      .+|+||||||+||+++.++   .+||+|||++..+.. .......|++.|+|||.+.+.      .++.++|+||+||++
T Consensus       122 ~~i~H~dl~p~nil~~~~~---~~~l~dfg~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il  197 (286)
T cd06622         122 HNIIHRDVKPTNVLVNGNG---QVKLCDFGVSGNLVA-SLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSI  197 (286)
T ss_pred             CCEeeCCCCHHHEEECCCC---CEEEeecCCcccccC-CccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHH
Confidence            5899999999999998866   699999999976542 233456788899999998543      357889999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      |+|++|+.||...........+..... ..++..+..++.++.+|+.+||..+|.+||+++++++||||...+.
T Consensus       198 ~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~  270 (286)
T cd06622         198 LEMALGRYPYPPETYANIFAQLSAIVD-GDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKN  270 (286)
T ss_pred             HHHHhCCCCCCCcchhhHHHHHHHHhh-cCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccC
Confidence            999999999976554443332221111 1122333457899999999999999999999999999999976643

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.86  E-value=3.2e-22  Score=202.49  Aligned_cols=144  Identities=26%  Similarity=0.418  Sum_probs=117.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||+.||+||||||+||++..+.   .+||.|||+|+.-...-....++.|.+|.|||++.+..|...+||||+||++.||
T Consensus       134 lhs~~IihRdLkPsnivv~~~~---~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEl  210 (369)
T KOG0665|consen  134 LHSAGIIHRDLKPSNIVVNSDC---TLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEL  210 (369)
T ss_pred             HHhcceeecccCcccceecchh---heeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHH
Confidence            4678999999999999999887   7999999999886655456667889999999999998899999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccC------------------------------CCCCCCcc-------cccCHHHHHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTE------------------------------LRFPPGAI-------EELHPDCVDLC  123 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~------------------------------~~~p~~~~-------~~ls~~~~dLI  123 (568)
                      ++|+..|.|.+..+.+.++...-.                              ..+|...+       ..-...+++++
T Consensus       211 i~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll  290 (369)
T KOG0665|consen  211 ILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLL  290 (369)
T ss_pred             hhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHH
Confidence            999999999887777766653210                              01111111       01124578999


Q ss_pred             HHhhccCCCCCCCHHHHHhchhHH
Q 008370          124 RCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus       124 ~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                      .+||..+|++|.+++++|+|||++
T Consensus       291 ~~MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  291 SKMLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             HHhhccChhhcccHHHHhcCCeee
Confidence            999999999999999999999997

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.86  E-value=3e-22  Score=205.35  Aligned_cols=146  Identities=28%  Similarity=0.486  Sum_probs=115.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC-CccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~-~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+||+++.++   .+||+|||++........ .....|++.|++||.+.+..++.++|+|||||++|+
T Consensus       131 LH~~~i~H~dL~p~Nili~~~~---~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~  207 (297)
T cd06656         131 LHSNQVIHRDIKSDNILLGMDG---SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE  207 (297)
T ss_pred             HHHCCcccCCCCHHHEEECCCC---CEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHH
Confidence            4567999999999999998776   699999999987654332 234578899999999998889999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      +++|..||.+.+.......+......  +...+..++..+.+|+.+||..+|.+||+++++++||||...+.
T Consensus       208 l~tg~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  277 (297)
T cd06656         208 MVEGEPPYLNENPLRALYLIATNGTP--ELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKP  277 (297)
T ss_pred             HHhCCCCCCCCCcchheeeeccCCCC--CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhccccc
Confidence            99999999876654433322222111  11223456788999999999999999999999999999976543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.86  E-value=7.3e-22  Score=202.38  Aligned_cols=133  Identities=17%  Similarity=0.214  Sum_probs=103.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--------CCccccCCCcccChhhhccCCCCcccchhh
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--------LADTLCGSPLYMAPEIIQNHKYDAKADLWS   72 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--------~~~t~~GT~~YmAPEvl~~~~ys~ksDIWS   72 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.+....        ......||+.|+|||++.+..++.++||||
T Consensus       142 lH~~~iiHrDiKp~Nill~~~~---~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwS  218 (294)
T PHA02882        142 IHEHGISHGDIKPENIMVDGNN---RGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLES  218 (294)
T ss_pred             HHhCCeecCCCCHHHEEEcCCC---cEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHH
Confidence            4567999999999999998765   68999999998764221        122357999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCcH-HHHH--------HHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           73 VGAILFQLVTGKPPFDGSNQ-LQLF--------QNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        73 lGviL~ELltG~~PF~g~~~-~~~~--------~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +||++|+|++|+.||.+... ....        ..+... ..     .....++.+.+++..||..+|++||+++++++
T Consensus       219 lG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        219 LGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEG-KI-----KIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhh-hh-----ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            99999999999999987632 1111        111111 11     12245788999999999999999999999854

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.86  E-value=3.4e-22  Score=216.70  Aligned_cols=139  Identities=26%  Similarity=0.502  Sum_probs=114.7

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHh
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT   82 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELlt   82 (568)
                      .++||||||||+||+|+.+  .+.|||+|+|||..+.... ...++|||.|||||++. ..|+..+||||||+++.||+|
T Consensus       163 ~PPIIHRDLKCDNIFinG~--~G~VKIGDLGLAtl~r~s~-aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT  238 (632)
T KOG0584|consen  163 DPPIIHRDLKCDNIFVNGN--LGEVKIGDLGLATLLRKSH-AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVT  238 (632)
T ss_pred             CCCccccccccceEEEcCC--cCceeecchhHHHHhhccc-cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHh
Confidence            4699999999999999765  4589999999998765443 45589999999999987 679999999999999999999


Q ss_pred             CCCCCCCC-cHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           83 GKPPFDGS-NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        83 G~~PF~g~-~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +..||.-. +..+++.++..+..   |.....--.+++++||.+||.. ..+|+|+.|+|+||||..-
T Consensus       239 ~eYPYsEC~n~AQIYKKV~SGiK---P~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  239 SEYPYSECTNPAQIYKKVTSGIK---PAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             ccCChhhhCCHHHHHHHHHcCCC---HHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence            99999854 55566666665532   2222223368999999999999 8999999999999999764

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.86  E-value=8.1e-22  Score=200.74  Aligned_cols=145  Identities=26%  Similarity=0.535  Sum_probs=117.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+||+++.++   .+||+|||++....... ......|++.|+|||.+.+..++.++|+|||||++|+
T Consensus       131 lH~~~i~H~dl~p~Nil~~~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~e  207 (285)
T cd06648         131 LHAQGVIHRDIKSDSILLTSDG---RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIE  207 (285)
T ss_pred             HHhCCeecCCCChhhEEEcCCC---cEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHH
Confidence            3567999999999999999876   79999999987654322 2234568999999999988889999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      |++|+.||.+.+.......+.........  ....++..+.+++.+||..+|.+||++.++++|+||...+
T Consensus       208 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~  276 (285)
T cd06648         208 MVDGEPPYFNEPPLQAMKRIRDNLPPKLK--NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG  276 (285)
T ss_pred             HHhCCCCCcCCCHHHHHHHHHhcCCCCCc--ccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence            99999999888776666655543211111  1224678999999999999999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.86  E-value=9.8e-22  Score=199.65  Aligned_cols=144  Identities=29%  Similarity=0.493  Sum_probs=110.8

Q ss_pred             CCCCCeEecCCCCCCeEEec-CCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-CCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVST-NEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~-~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL   77 (568)
                      +|..+|+||||||+||+++. ++   .+||+|||+++..... .......+++.|+|||++.+ ..++.++|+|||||++
T Consensus       126 LH~~~i~H~dl~~~nil~~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l  202 (295)
T cd07837         126 CHKHGVMHRDLKPQNLLVDKQKG---LLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIF  202 (295)
T ss_pred             HHHCCeeecCCChHHEEEecCCC---eEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHH
Confidence            35679999999999999987 44   7999999999865432 22233457889999998865 4578899999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCC----C------------CC-------CCcccccCHHHHHHHHHhhccCCCCC
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTEL----R------------FP-------PGAIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~----~------------~p-------~~~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      |+|++|..||.+.+....+.++......    .            ++       ......++..+.+||.+||..+|.+|
T Consensus       203 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R  282 (295)
T cd07837         203 AEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKR  282 (295)
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhc
Confidence            9999999999987766655544331100    0            00       01113467889999999999999999


Q ss_pred             CCHHHHHhchhHH
Q 008370          135 ITFKEFFNHRFLG  147 (568)
Q Consensus       135 pTaeElL~Hpff~  147 (568)
                      |+++|++.||||+
T Consensus       283 ~~~~eil~~~~~~  295 (295)
T cd07837         283 ISAKAALTHPYFD  295 (295)
T ss_pred             CCHHHHhcCCCcC
Confidence            9999999999984

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.86  E-value=1e-21  Score=195.15  Aligned_cols=139  Identities=28%  Similarity=0.544  Sum_probs=116.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+|+||+|+||+++.++   .+||+|||++....... ......|++.|+|||++.+..++.++|+|||||++|+
T Consensus       117 lh~~~i~h~~l~~~nil~~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~  193 (256)
T cd08218         117 VHDRKILHRDIKSQNIFLTKDG---TIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYE  193 (256)
T ss_pred             HHhCCEecCCCCHHHEEEcCCC---CEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHH
Confidence            3566999999999999998776   69999999998764432 2234568889999999988888999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|+.||...+..+....+........    +..++.++.++|.+||+.+|.+||++.++++||||
T Consensus       194 l~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         194 MCTLKHAFEAGNMKNLVLKIIRGSYPPV----SSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             HHcCCCCccCCCHHHHHHHHhcCCCCCC----cccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence            9999999988777777666655433222    24678899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.86  E-value=9.7e-22  Score=198.51  Aligned_cols=140  Identities=25%  Similarity=0.476  Sum_probs=110.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+||+++.++.  .+||+|||+++.....   ....|+..|+|||++.+..++.++|+||+||++|+|
T Consensus       125 lH~~~i~H~dl~p~nil~~~~~~--~~~l~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l  199 (267)
T PHA03390        125 LHKHNIIHNDIKLENVLYDRAKD--RIYLCDYGLCKIIGTP---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYEL  199 (267)
T ss_pred             HHhCCeeeCCCCHHHEEEeCCCC--eEEEecCccceecCCC---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHH
Confidence            46679999999999999988752  6999999999876433   235688999999999988899999999999999999


Q ss_pred             HhCCCCCCCCcHHHH-HHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-HHHHHhchhHH
Q 008370           81 VTGKPPFDGSNQLQL-FQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-FKEFFNHRFLG  147 (568)
Q Consensus        81 ltG~~PF~g~~~~~~-~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-aeElL~Hpff~  147 (568)
                      ++|+.||........ ...+....  ..+...+...++.+.+||.+||+.+|.+|++ ++++++||||.
T Consensus       200 ~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        200 LTGKHPFKEDEDEELDLESLLKRQ--QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             HHCCCCCCCCCcchhhHHHHHHhh--cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCccc
Confidence            999999986543321 11121111  1122233467899999999999999999996 69999999985

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.86  E-value=1.4e-21  Score=200.57  Aligned_cols=143  Identities=26%  Similarity=0.512  Sum_probs=115.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..+|+||||||.||+++.++   .+||+|||+++...... .....+|++.|+|||++.+..++.++|+|||||++|+|
T Consensus       134 H~~~ivH~dl~p~Nill~~~~---~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el  210 (297)
T cd06659         134 HSQGVIHRDIKSDSILLTLDG---RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEM  210 (297)
T ss_pred             HhCCeecCCCCHHHeEEccCC---cEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHH
Confidence            557999999999999998876   79999999987654322 23346789999999999888899999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++|+.||......+....+......  .......++..+.+++.+||..+|.+||+++++++||||...
T Consensus       211 ~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~  277 (297)
T cd06659         211 VDGEPPYFSDSPVQAMKRLRDSPPP--KLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQT  277 (297)
T ss_pred             HhCCCCCCCCCHHHHHHHHhccCCC--CccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence            9999999887766665544332111  112234567889999999999999999999999999999654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.86  E-value=1.3e-21  Score=197.95  Aligned_cols=136  Identities=24%  Similarity=0.378  Sum_probs=110.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      +|..||+||||||.||+++.++   .+||+|||+++......   ......+++.|+|||.+.+..++.++|||||||++
T Consensus       140 lH~~gi~H~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l  216 (283)
T cd05091         140 LSSHHVVHKDLATRNVLVFDKL---NVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVL  216 (283)
T ss_pred             HHHcCccccccchhheEecCCC---ceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHH
Confidence            3567999999999999998766   69999999988654322   12334567789999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |||++ |..||.+....+....+........+    ...+..+.+|+.+||+.+|.+||++.+++..
T Consensus       217 ~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         217 WEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCP----DDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            99998 88999988877777776654333222    3578889999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.86  E-value=1.1e-21  Score=199.11  Aligned_cols=143  Identities=24%  Similarity=0.458  Sum_probs=112.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~EL   80 (568)
                      |..+|+||||||+||+++.++   .+||+|||+++.+... .....+|+..|+|||++.. ..++.++|+||+||++|+|
T Consensus       114 H~~~i~H~di~p~nili~~~~---~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l  189 (278)
T cd05606         114 HNRFVVYRDLKPANILLDEHG---HVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL  189 (278)
T ss_pred             HHCCEEcCCCCHHHEEECCCC---CEEEccCcCccccCcc-CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHH
Confidence            556899999999999998876   6999999998765432 2335679999999999874 4688999999999999999


Q ss_pred             HhCCCCCCCCc---HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHh
Q 008370           81 VTGKPPFDGSN---QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQT  152 (568)
Q Consensus        81 ltG~~PF~g~~---~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~  152 (568)
                      ++|+.||.+..   ..... .........+    +...+..+.+++.+||..+|.+||     ++.++++||||....+.
T Consensus       190 ~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~----~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~  264 (278)
T cd05606         190 LRGHSPFRQHKTKDKHEID-RMTLTMAVEL----PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQ  264 (278)
T ss_pred             HhCCCCCCCCCccchHHHH-HHhhccCCCC----CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCCch
Confidence            99999998763   22222 2222222222    235688999999999999999999     99999999999887654


Q ss_pred             h
Q 008370          153 V  153 (568)
Q Consensus       153 ~  153 (568)
                      .
T Consensus       265 ~  265 (278)
T cd05606         265 M  265 (278)
T ss_pred             H
Confidence            3

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.86  E-value=1.7e-21  Score=193.61  Aligned_cols=139  Identities=29%  Similarity=0.581  Sum_probs=116.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++...... ......|++.|+|||.+.+..++.++|+||+||++|+
T Consensus       117 lh~~~i~h~dl~p~ni~~~~~~---~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~  193 (256)
T cd08221         117 IHKAGILHRDIKTLNIFLTKAG---LIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYE  193 (256)
T ss_pred             HHhCCccccCCChHhEEEeCCC---CEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHH
Confidence            3567999999999999999876   69999999998765433 3345678999999999988888999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|..||.+.+..+....+........    ...++.++.+++.+||..+|.+||+++++++|+|+
T Consensus       194 l~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         194 LLTLKRTFDATNPLNLVVKIVQGNYTPV----VSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             HHHCCCCCCCCCHHHHHHHHHcCCCCCC----ccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence            9999999998887777776655432221    24568899999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.86  E-value=1.5e-21  Score=199.48  Aligned_cols=143  Identities=27%  Similarity=0.521  Sum_probs=112.6

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCC----CCcccchhhHHHHHHH
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK----YDAKADLWSVGAILFQ   79 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~----ys~ksDIWSlGviL~E   79 (568)
                      .+|+||||+|+||+++.++   .+||+|||++..+..........+++.|+|||.+....    ++.++|+||||+++|+
T Consensus       134 ~~i~H~dl~p~nill~~~~---~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~e  210 (296)
T cd06618         134 HGVIHRDVKPSNILLDASG---NVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVE  210 (296)
T ss_pred             CCEecCCCcHHHEEEcCCC---CEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHH
Confidence            5899999999999998766   79999999997765433334456788999999986543    7889999999999999


Q ss_pred             HHhCCCCCCCCc-HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           80 LVTGKPPFDGSN-QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        80 LltG~~PF~g~~-~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      |++|+.||.... ..+.+..+........+..  ..++.++.+|+.+||..+|.+||++++++.|+||.....
T Consensus       211 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  281 (296)
T cd06618         211 LATGQFPYKNCKTEFEVLTKILQEEPPSLPPN--EGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYET  281 (296)
T ss_pred             HHhCCCCCCcchhHHHHHHHHhcCCCCCCCCC--CCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccch
Confidence            999999997643 2344545544432222221  246788999999999999999999999999999976543

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.86  E-value=7.5e-22  Score=199.06  Aligned_cols=143  Identities=31%  Similarity=0.575  Sum_probs=111.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccC-CCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL   77 (568)
                      ||..+|+|+||||+||+++.++   .+||+|||++.......  ......|+..|+|||.+.+. .++.++||||+||++
T Consensus       115 lH~~~i~H~dl~p~ni~~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l  191 (286)
T cd07832         115 MHANGIMHRDLKPANLLISADG---VLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIF  191 (286)
T ss_pred             HHHCCeecCCcCHHHEEEcCCC---cEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHH
Confidence            3567999999999999999866   69999999998765432  23446789999999988654 468899999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCC------------------CCC-------CcccccCHHHHHHHHHhhccCCC
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELR------------------FPP-------GAIEELHPDCVDLCRCLLRQNPV  132 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~------------------~p~-------~~~~~ls~~~~dLI~~cL~~dP~  132 (568)
                      |+|++|.+||.+......+..+.......                  ++.       ......+..+.+|+.+||..+|.
T Consensus       192 ~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  271 (286)
T cd07832         192 AELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPS  271 (286)
T ss_pred             HHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChh
Confidence            99999999998877666555544321110                  110       01124568899999999999999


Q ss_pred             CCCCHHHHHhchhH
Q 008370          133 ERITFKEFFNHRFL  146 (568)
Q Consensus       133 ~RpTaeElL~Hpff  146 (568)
                      +||+++++++||||
T Consensus       272 ~R~~~~~~l~h~~~  285 (286)
T cd07832         272 KRLSAAEALRHPYF  285 (286)
T ss_pred             hCCCHHHHhhCcCc
Confidence            99999999999998

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.86  E-value=1.8e-22  Score=199.90  Aligned_cols=145  Identities=20%  Similarity=0.328  Sum_probs=117.3

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc--cCCCCcccchhhHHHHHHHHH
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ--NHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~--~~~ys~ksDIWSlGviL~ELl   81 (568)
                      +.||||||||+|||++..|   .|||||||++..+...-......|...|||||.+.  ..+|+-++|+||||++|||+.
T Consensus       187 lkiIHRDvKPSNILldr~G---~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvA  263 (361)
T KOG1006|consen  187 LKIIHRDVKPSNILLDRHG---DVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVA  263 (361)
T ss_pred             hhhhhccCChhheEEecCC---CEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeee
Confidence            4799999999999999988   59999999998766544445567899999999884  346999999999999999999


Q ss_pred             hCCCCCCCCc-HHHHHHHHHhccCCCCCC-CcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           82 TGKPPFDGSN-QLQLFQNILTSTELRFPP-GAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        82 tG~~PF~g~~-~~~~~~~Il~~~~~~~p~-~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      ||+.||.+-+ ..+.+..++.+..+.+-. ......+..+..++.-||.+|-.+||...+++.+||+.....
T Consensus       264 tG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~  335 (361)
T KOG1006|consen  264 TGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAV  335 (361)
T ss_pred             cCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhh
Confidence            9999998754 445566666554333222 112346789999999999999999999999999999976643

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.85  E-value=2.2e-21  Score=189.93  Aligned_cols=140  Identities=29%  Similarity=0.520  Sum_probs=112.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..+++||||+|+||+++.++   .+||+|||++.............|+..|++||.+....++.++|+||||+++|+|
T Consensus       114 lh~~~i~h~dl~p~ni~i~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l  190 (253)
T cd05122         114 LHSNGIIHRDIKAANILLTSDG---EVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIEL  190 (253)
T ss_pred             hhcCCEecCCCCHHHEEEccCC---eEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHH
Confidence            4567999999999999999876   6999999999876554324456788999999999888889999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF  145 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpf  145 (568)
                      ++|+.||...+.......+........+..  ..++..+.+++.+||..||.+|||+.++++|||
T Consensus       191 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         191 AEGKPPYSELPPMKALFKIATNGPPGLRNP--EKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HhCCCCCCCCchHHHHHHHHhcCCCCcCcc--cccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            999999988755554443333222222211  223788999999999999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.85  E-value=7.5e-22  Score=206.73  Aligned_cols=146  Identities=31%  Similarity=0.491  Sum_probs=113.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++....  ......|++.|+|||++.+ ..++.++|+|||||++|+
T Consensus       133 LH~~~i~H~dlkp~NIll~~~~---~~kL~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~e  207 (342)
T cd07879         133 IHSAGIIHRDLKPGNLAVNEDC---ELKILDFGLARHADA--EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAE  207 (342)
T ss_pred             HHHCCcccCCCCHHHEEECCCC---CEEEeeCCCCcCCCC--CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHH
Confidence            4567999999999999999876   699999999876432  2234567889999999866 468889999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCC----------------------CCCCC----cccccCHHHHHHHHHhhccCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTEL----------------------RFPPG----AIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~----------------------~~p~~----~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      |++|+.||.+.+....+..+......                      ..+..    .....++.+.+|+.+||+.||.+
T Consensus       208 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~  287 (342)
T cd07879         208 MLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDK  287 (342)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhh
Confidence            99999999987755554444331110                      00100    01235678999999999999999


Q ss_pred             CCCHHHHHhchhHHHhHH
Q 008370          134 RITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       134 RpTaeElL~Hpff~~~~~  151 (568)
                      ||++++++.||||...++
T Consensus       288 R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         288 RLTATEALEHPYFDSFRD  305 (342)
T ss_pred             CcCHHHHhcCcchhhccc
Confidence            999999999999987754

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.85  E-value=2.1e-21  Score=196.19  Aligned_cols=139  Identities=21%  Similarity=0.368  Sum_probs=110.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+||+++.++....+||+|||+++.+.....   .....++..|+|||++.+..++.++|||||||++
T Consensus       132 LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il  211 (277)
T cd05036         132 LEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLL  211 (277)
T ss_pred             HHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHH
Confidence            3567899999999999999766555799999999987643221   1122334679999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+|++ |..||.+....+....+........+    ..++..+.+++.+||+.+|++||++.++++|
T Consensus       212 ~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         212 WEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPP----KGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            99997 99999988776666555443333322    3567899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.85  E-value=1.1e-21  Score=204.78  Aligned_cols=147  Identities=29%  Similarity=0.452  Sum_probs=112.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++..... .......|+..|+|||.+.. ..++.++|+|||||++|
T Consensus       124 LH~~~i~H~dlkp~Nil~~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~  200 (337)
T cd07858         124 IHSANVLHRDLKPSNLLLNANC---DLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFA  200 (337)
T ss_pred             HHhCCEecCCCCHHHEEEcCCC---CEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHH
Confidence            3567999999999999998876   6999999999876433 23345578889999998864 46889999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCC------------------------CCC--CCcccccCHHHHHHHHHhhccCCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTEL------------------------RFP--PGAIEELHPDCVDLCRCLLRQNPV  132 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~------------------------~~p--~~~~~~ls~~~~dLI~~cL~~dP~  132 (568)
                      +|++|++||.+.+....+..+......                        ..+  ......+++.+.+|+++||+.+|.
T Consensus       201 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  280 (337)
T cd07858         201 ELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPS  280 (337)
T ss_pred             HHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChh
Confidence            999999999876644333222211000                        000  011235678899999999999999


Q ss_pred             CCCCHHHHHhchhHHHhH
Q 008370          133 ERITFKEFFNHRFLGELR  150 (568)
Q Consensus       133 ~RpTaeElL~Hpff~~~~  150 (568)
                      +|||++++++||||..+.
T Consensus       281 ~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         281 KRITVEEALAHPYLASLH  298 (337)
T ss_pred             hccCHHHHHcCcchhhhc
Confidence            999999999999997654

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.85  E-value=1.4e-21  Score=197.76  Aligned_cols=141  Identities=27%  Similarity=0.455  Sum_probs=110.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhc-----cCCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~-----~~~ys~ksDIWSlG   74 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.+.... ......|++.|+|||++.     ...++.++|+||+|
T Consensus       140 lH~~~i~H~dlkp~nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG  216 (286)
T cd06638         140 LHVNKTIHRDVKGNNILLTTEG---GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLG  216 (286)
T ss_pred             HHhCCccccCCCHHhEEECCCC---CEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHH
Confidence            3567999999999999999876   69999999998765432 233457899999999875     34578899999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|+|++|+.||........+..+........  ..+...+..+.+++.+||..+|.+||++.|+++|+||
T Consensus       217 vi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         217 ITAIELGDGDPPLADLHPMRALFKIPRNPPPTL--HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             HHHHHHhcCCCCCCCCchhHHHhhccccCCCcc--cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            999999999999987765544433322211111  1122356789999999999999999999999999996

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.85  E-value=1.7e-21  Score=195.32  Aligned_cols=136  Identities=20%  Similarity=0.387  Sum_probs=110.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.+.....   .....+++.|++||.+....++.++|+|||||++
T Consensus       128 lH~~~i~H~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il  204 (272)
T cd05075         128 LSSKSFIHRDLAARNCMLNENM---NVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTM  204 (272)
T ss_pred             HHHCCeeccccchhheEEcCCC---CEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHH
Confidence            3567999999999999998766   699999999987654322   1223456789999999988899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+|++ |+.||.+....+....+........+    ..++..+.+++.+||..+|++|||+.+++++
T Consensus       205 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         205 WEIATRGQTPYPGVENSEIYDYLRQGNRLKQP----PDCLDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            99999 89999988777766666554333332    3567889999999999999999999999654

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.85  E-value=1.1e-21  Score=196.15  Aligned_cols=140  Identities=27%  Similarity=0.524  Sum_probs=112.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-------CCCCccccCCCcccChhhhccCCCCcccchhhHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-------QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG   74 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-------~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlG   74 (568)
                      |..+|+|+||||+||+++.++   .+||+|||+++....       ........|+..|+|||++.+..++.++|+||+|
T Consensus       119 H~~~i~H~dl~p~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG  195 (265)
T cd06631         119 HNNCVVHRDIKGNNVMLMPNG---IIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIG  195 (265)
T ss_pred             HhCCcccCCcCHHhEEECCCC---eEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHH
Confidence            456899999999999998776   799999999876431       1122345689999999999988899999999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|+|++|..||...+.......+..... . .+.....++..+.+++++||..+|.+||++.+++.||||
T Consensus       196 ~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         196 CTVFEMATGKPPLASMDRLAAMFYIGAHRG-L-MPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             HHHHHHHhCCCccccCChHHHHHHhhhccC-C-CCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            999999999999987665544433332211 1 122334678899999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.85  E-value=7.1e-22  Score=206.06  Aligned_cols=147  Identities=33%  Similarity=0.540  Sum_probs=110.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhcc-CCCCcccchhhHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGA   75 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGv   75 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++......    .....+|++.|+|||++.+ ..++.++||||+||
T Consensus       122 LH~~~ivH~dlkp~Nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv  198 (336)
T cd07849         122 IHSANVLHRDLKPSNLLLNTNC---DLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGC  198 (336)
T ss_pred             HHhCCeeccCCCHHHEEECCCC---CEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHH
Confidence            3567999999999999998876   69999999998754322    2234578999999998754 56888999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccC---------------------CCCCCC-----cccccCHHHHHHHHHhhcc
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTE---------------------LRFPPG-----AIEELHPDCVDLCRCLLRQ  129 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~---------------------~~~p~~-----~~~~ls~~~~dLI~~cL~~  129 (568)
                      ++|+|++|+.||.+.+.......+.....                     ....+.     .....++.+.+++.+||..
T Consensus       199 il~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  278 (336)
T cd07849         199 ILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTF  278 (336)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCC
Confidence            99999999999987654433322211000                     000000     1123567899999999999


Q ss_pred             CCCCCCCHHHHHhchhHHHhH
Q 008370          130 NPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus       130 dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +|.+|||+.++++||||....
T Consensus       279 dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         279 NPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             ChhhCcCHHHHhcCccccccC
Confidence            999999999999999997654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.85  E-value=1.6e-21  Score=197.18  Aligned_cols=143  Identities=31%  Similarity=0.522  Sum_probs=116.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..+|+|+||+|+||+++.++   .+||+|||++....... ......++..|+|||++.+..++.++|+|||||++|+|
T Consensus       118 h~~~ivH~dl~p~Nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el  194 (277)
T cd06640         118 HSEKKIHRDIKAANVLLSEQG---DVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIEL  194 (277)
T ss_pred             HhCCccCcCCChhhEEEcCCC---CEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHH
Confidence            556999999999999999876   69999999998765433 22335678899999999888899999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      ++|..||...........+....    ++......+..+.+++.+||..+|++||++.+++.|+||.....
T Consensus       195 ~tg~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  261 (277)
T cd06640         195 AKGEPPNSDMHPMRVLFLIPKNN----PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK  261 (277)
T ss_pred             HHCCCCCCCcChHhHhhhhhcCC----CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence            99999998877665554432221    23333456788999999999999999999999999999976543

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.85  E-value=1.8e-21  Score=202.22  Aligned_cols=148  Identities=20%  Similarity=0.353  Sum_probs=108.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--------CCccccCCCcccChhhhcc--CCCCcccch
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--------LADTLCGSPLYMAPEIIQN--HKYDAKADL   70 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--------~~~t~~GT~~YmAPEvl~~--~~ys~ksDI   70 (568)
                      ||..+|+||||||+|||++.++   .+|++|||.+.......        ......++..|+|||++.+  ..|+.++||
T Consensus       117 LH~~~iiH~dlkp~Nil~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di  193 (327)
T cd08227         117 IHHMGYVHRSVKASHILISVDG---KVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI  193 (327)
T ss_pred             HHHCCEecCCCChhhEEEecCC---cEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhH
Confidence            4667999999999999999876   68999998764432111        1122356778999999875  468899999


Q ss_pred             hhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCC------C-----------------------------------C
Q 008370           71 WSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRF------P-----------------------------------P  109 (568)
Q Consensus        71 WSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~------p-----------------------------------~  109 (568)
                      |||||++|+|++|+.||....................      +                                   .
T Consensus       194 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (327)
T cd08227         194 YSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSH  273 (327)
T ss_pred             HHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCccc
Confidence            9999999999999999987654443322221110000      0                                   0


Q ss_pred             CcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370          110 GAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       110 ~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      .....+++.+.+|+.+||+.||.+|||++++++||||..+..
T Consensus       274 ~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~~  315 (327)
T cd08227         274 PYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR  315 (327)
T ss_pred             ccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcch
Confidence            011234678999999999999999999999999999987653

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.85  E-value=1.4e-21  Score=226.81  Aligned_cols=143  Identities=27%  Similarity=0.518  Sum_probs=113.5

Q ss_pred             CeEecCCCCCCeEEecCC--------------CCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc--CCCCccc
Q 008370            5 FMIVSANACQNLLVSTNE--------------VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN--HKYDAKA   68 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~--------------~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~--~~ys~ks   68 (568)
                      +||||||||+||||+.+.              ..+.+||+|||+++.+.........+||+.|+|||++.+  ..++.++
T Consensus       145 ~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KS  224 (1021)
T PTZ00266        145 RVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKS  224 (1021)
T ss_pred             CceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchh
Confidence            599999999999997532              234699999999987765555556789999999999854  4588999


Q ss_pred             chhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           69 DLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        69 DIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      |||||||++|+|++|..||...+....+...+... +.++   ....+.++.+||.+||..+|.+||++.+++.|+|+..
T Consensus       225 DVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~-p~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~  300 (1021)
T PTZ00266        225 DMWALGCIIYELCSGKTPFHKANNFSQLISELKRG-PDLP---IKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKN  300 (1021)
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcC-CCCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence            99999999999999999998766554443333322 1122   2346789999999999999999999999999999976


Q ss_pred             hHH
Q 008370          149 LRQ  151 (568)
Q Consensus       149 ~~~  151 (568)
                      +..
T Consensus       301 i~~  303 (1021)
T PTZ00266        301 VGP  303 (1021)
T ss_pred             cCC
Confidence            643

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.85  E-value=8.4e-22  Score=197.30  Aligned_cols=141  Identities=23%  Similarity=0.395  Sum_probs=107.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhc---cCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~---~~~ys~ksDIWSlGvi   76 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.+.... ......|++.|+|||.+.   ...++.++|+||+||+
T Consensus       122 lH~~~i~H~dl~p~nill~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~i  198 (267)
T cd06646         122 LHSKGKMHRDIKGANILLTDNG---DVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGIT  198 (267)
T ss_pred             HHHCCccccCCCHHHEEECCCC---CEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHH
Confidence            4667999999999999998776   69999999998764322 233457889999999884   3457788999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCCCC-CCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchh
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELRFP-PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF  145 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p-~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpf  145 (568)
                      +|+|++|+.||......+....+... ....+ ......++..+.+|+++||..+|++||+++++++|+|
T Consensus       199 l~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         199 AIELAELQPPMFDLHPMRALFLMSKS-NFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHHHHhCCCCccccchhhhheeeecC-CCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence            99999999999766544333222221 11111 1112346789999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=1.5e-21  Score=197.18  Aligned_cols=144  Identities=27%  Similarity=0.481  Sum_probs=114.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhc-----cCCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~-----~~~ys~ksDIWSlGv   75 (568)
                      |..+|+|+||||+||+++.++   .+||+|||++...... .......|++.|++||++.     ...++.++|+|||||
T Consensus       120 h~~~i~h~dl~p~nili~~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~  196 (280)
T cd06611         120 HSHKVIHRDLKAGNILLTLDG---DVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGI  196 (280)
T ss_pred             HHCCcccCCCChhhEEECCCC---CEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHH
Confidence            456899999999999998876   6999999998765432 2233457899999999975     345678899999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|+|++|+.||.+....+...++.......+.  .+..++.++.+++.+||..+|.+||+++++++||||....
T Consensus       197 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~  269 (280)
T cd06611         197 TLIELAQMEPPHHELNPMRVLLKILKSEPPTLD--QPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQS  269 (280)
T ss_pred             HHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcC--CcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcccc
Confidence            999999999999988776666655543222211  2235678999999999999999999999999999997653

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.85  E-value=2.6e-21  Score=193.19  Aligned_cols=135  Identities=23%  Similarity=0.373  Sum_probs=109.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC----CccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL----ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~----~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      +|..||+||||||+||+++.++   .+||+|||+++.+.....    .....++..|+|||.+....++.++|+|||||+
T Consensus       111 lH~~~i~H~dlkp~nill~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  187 (257)
T cd05116         111 LEETNFVHRDLAARNVLLVTQH---YAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVL  187 (257)
T ss_pred             HHHCCEeecccchhhEEEcCCC---eEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHH
Confidence            3557999999999999999876   799999999987643321    112234578999999988888999999999999


Q ss_pred             HHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           77 LFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        77 L~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|||++ |..||.+.+..+....+........|    ..+++++.++|.+||+.||.+||++++|..
T Consensus       188 l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         188 MWEAFSYGQKPYKGMKGNEVTQMIESGERMECP----QRCPPEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCC----CCCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence            999998 99999988777777666554333333    357889999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.85  E-value=1.4e-21  Score=203.45  Aligned_cols=148  Identities=30%  Similarity=0.496  Sum_probs=113.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhcc-CCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlG   74 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++.+....     ......|++.|+|||++.+ ..++.++|+||+|
T Consensus       121 LH~~givH~dlkp~Nili~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slG  197 (332)
T cd07857         121 IHSANVLHRDLKPGNLLVNADC---ELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVG  197 (332)
T ss_pred             HHhCCcccCCCCHHHeEEcCCC---CEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHH
Confidence            4667999999999999998876   69999999998654322     1234578999999998765 5688999999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCC----------------------CCC----CCcccccCHHHHHHHHHhhc
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTEL----------------------RFP----PGAIEELHPDCVDLCRCLLR  128 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~----------------------~~p----~~~~~~ls~~~~dLI~~cL~  128 (568)
                      |++|+|++|.+||.+.+....+..++.....                      ..+    .......+..+.+|+.+||+
T Consensus       198 v~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  277 (332)
T cd07857         198 CILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLA  277 (332)
T ss_pred             HHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHcc
Confidence            9999999999999877654444333221100                      000    01122356789999999999


Q ss_pred             cCCCCCCCHHHHHhchhHHHhHH
Q 008370          129 QNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       129 ~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      .+|.+|||+.+++.||||.+.++
T Consensus       278 ~~P~~R~t~~~ll~~~~~~~~~~  300 (332)
T cd07857         278 FDPTKRISVEEALEHPYLAIWHD  300 (332)
T ss_pred             CCcccCCCHHHHhcChhhhhhcC
Confidence            99999999999999999977653

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.85  E-value=1.2e-21  Score=198.00  Aligned_cols=142  Identities=29%  Similarity=0.472  Sum_probs=109.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCC-CCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHK-YDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~-ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||+|+||+++.++   .+||+|||+++..... .......+++.|+|||++.+.. ++.++|+|||||++|+
T Consensus       117 h~~~i~H~~l~p~nill~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~  193 (284)
T cd07860         117 HSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE  193 (284)
T ss_pred             HHCCeecCCCCHHHEEECCCC---CEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHH
Confidence            557999999999999999877   6999999998765432 2233446788999999886644 5788999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCC-----------------CCCC-------CcccccCHHHHHHHHHhhccCCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTEL-----------------RFPP-------GAIEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~-----------------~~p~-------~~~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      |++|+.||.+.+......++......                 .++.       .....+++.++++|.+||+.||.+||
T Consensus       194 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp  273 (284)
T cd07860         194 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRI  273 (284)
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCC
Confidence            99999999887765544443321110                 0000       01124578889999999999999999


Q ss_pred             CHHHHHhchhH
Q 008370          136 TFKEFFNHRFL  146 (568)
Q Consensus       136 TaeElL~Hpff  146 (568)
                      |++++++||||
T Consensus       274 t~~~~l~~~~f  284 (284)
T cd07860         274 SAKAALAHPFF  284 (284)
T ss_pred             CHHHHhcCCCC
Confidence            99999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.85  E-value=1.6e-21  Score=193.26  Aligned_cols=140  Identities=34%  Similarity=0.560  Sum_probs=113.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+|+||||.||+++.++.  .+||+|||.+....... ......|++.|+|||++....++.++|+||||+++|+
T Consensus       117 lh~~~i~H~dl~~~nil~~~~~~--~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~  194 (257)
T cd08225         117 IHDRKILHRDIKSQNIFLSKNGM--VAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYE  194 (257)
T ss_pred             HHHCCcccccCCHHHEEEcCCCC--eEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHH
Confidence            35679999999999999987652  57999999997765332 2234568899999999988889999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|..||...+..+....+.......    .....+.++.+++.+||..+|++|||+.++++||||
T Consensus       195 l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         195 LCTLKHPFEGNNLHQLVLKICQGYFAP----ISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             HHhCCCCCCCccHHHHHHHHhcccCCC----CCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence            999999998877666655554432221    223567889999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.85  E-value=1.8e-21  Score=195.72  Aligned_cols=142  Identities=28%  Similarity=0.497  Sum_probs=112.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccC-CCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+|+||||+||+++.++   .+||+|||.+....... ......++..|++||.+.+. .++.++|+||+|+++|+
T Consensus       115 H~~~i~H~dl~p~nili~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~  191 (283)
T cd05118         115 HSHGILHRDLKPENLLINTEG---VLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAE  191 (283)
T ss_pred             HHCCeeecCcCHHHEEECCCC---cEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHH
Confidence            557999999999999999776   69999999998765443 23335678889999998776 78899999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCC------------------CCC-------CcccccCHHHHHHHHHhhccCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELR------------------FPP-------GAIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~------------------~p~-------~~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      |++|+.||.+.+..+.+..+.......                  ++.       .....++..+.++|.+||..||.+|
T Consensus       192 l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R  271 (283)
T cd05118         192 LLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKR  271 (283)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccC
Confidence            999999998877666554443221110                  000       1122457789999999999999999


Q ss_pred             CCHHHHHhchhH
Q 008370          135 ITFKEFFNHRFL  146 (568)
Q Consensus       135 pTaeElL~Hpff  146 (568)
                      |++++++.||||
T Consensus       272 p~~~~ll~~~~~  283 (283)
T cd05118         272 ITAEQALAHPYF  283 (283)
T ss_pred             cCHHHHhhCCCC
Confidence            999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.85  E-value=3e-21  Score=191.88  Aligned_cols=142  Identities=30%  Similarity=0.502  Sum_probs=115.7

Q ss_pred             CCC-CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC-ccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCY-VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~-~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~-~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      +|. .+|+||||+|+||+++.++   .+||+|||++......... ....++..|+|||.+....++.++|+|+||+++|
T Consensus       115 lh~~~~~~H~~l~~~ni~~~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~  191 (264)
T cd06623         115 LHTKRHIIHRDIKPSNLLINSKG---EVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLL  191 (264)
T ss_pred             HhccCCCccCCCCHHHEEECCCC---CEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHH
Confidence            356 7999999999999998876   6999999999876543322 3557888999999998888999999999999999


Q ss_pred             HHHhCCCCCCCC---cHHHHHHHHHhccCCCCCCCcccc-cCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           79 QLVTGKPPFDGS---NQLQLFQNILTSTELRFPPGAIEE-LHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        79 ELltG~~PF~g~---~~~~~~~~Il~~~~~~~p~~~~~~-ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +|++|..||...   ...+....+........+    .. ++..+.+++.+||..+|.+||++.++++||||+..
T Consensus       192 ~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         192 ECALGKFPFLPPGQPSFFELMQAICDGPPPSLP----AEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             HHHhCCCCCccccccCHHHHHHHHhcCCCCCCC----cccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence            999999999876   344445445433222222    23 78899999999999999999999999999999765

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.85  E-value=2.2e-21  Score=191.26  Aligned_cols=139  Identities=32%  Similarity=0.610  Sum_probs=116.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+|+||+|+||+++.++   .+||+|||++....... ......|++.|+|||.+....++.++|+|++|+++|+
T Consensus       119 lh~~~~~H~dl~~~nil~~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~  195 (258)
T cd08215         119 LHSRKILHRDIKPQNIFLTSNG---LVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYE  195 (258)
T ss_pred             HHhCCEecccCChHHeEEcCCC---cEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHH
Confidence            3556999999999999999866   69999999998765433 3445678999999999988889999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|..||...+..+....+........    +...+..+.+++.+||..+|.+||++.++++||||
T Consensus       196 l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         196 LCTLKHPFEGENLLELALKILKGQYPPI----PSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             HHcCCCCCCCCcHHHHHHHHhcCCCCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            9999999988877666666654432222    23667899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.85  E-value=2.6e-22  Score=230.54  Aligned_cols=140  Identities=26%  Similarity=0.483  Sum_probs=118.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhcc---CCCCcccchhhH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQN---HKYDAKADLWSV   73 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~---~~ys~ksDIWSl   73 (568)
                      |..|||||||||.||+++.++   .+|++|||.|+.+....     -.....||+.|||||++.+   .+...++||||+
T Consensus      1351 H~~gIVHRDIK~aNI~Ld~~g---~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWsl 1427 (1509)
T KOG4645|consen 1351 HEHGIVHRDIKPANILLDFNG---LIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSL 1427 (1509)
T ss_pred             HhcCceecCCCccceeeecCC---cEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcc
Confidence            567999999999999999988   79999999999876442     1235689999999999964   456678999999


Q ss_pred             HHHHHHHHhCCCCCCCC-cHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           74 GAILFQLVTGKPPFDGS-NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        74 GviL~ELltG~~PF~g~-~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ||++.||+||+.||... +..++.+++-.+..+++|.    .++++.++||.+||..||++|.++.|+++|.|-+.
T Consensus      1428 GCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~----~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1428 GCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPE----RLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred             cceEEEeecCCCchhhccchhHHHhHHhccCCCCCch----hhhHhHHHHHHHHHhcCchhhhHHHHHHHhhcccc
Confidence            99999999999999764 4667777776666666554    58999999999999999999999999999987643

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.85  E-value=3.1e-21  Score=198.27  Aligned_cols=140  Identities=26%  Similarity=0.467  Sum_probs=113.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc---cCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~---~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||+|+||+++.++   .+||+|||+++.....   ....|++.|+|||++.   ...++.++||||||+++
T Consensus       131 LH~~~i~H~dl~p~nIl~~~~~---~~kL~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il  204 (307)
T cd06607         131 LHSHERIHRDIKAGNILLTEPG---TVKLADFGSASLVSPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC  204 (307)
T ss_pred             HHHCCceecCCCcccEEECCCC---CEEEeecCcceecCCC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHH
Confidence            3567999999999999998876   6999999998765432   3457888999999874   35688899999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |+|++|+.||.+.+.......+........+   ....+..+.+++.+||..+|.+||++.+++.||||...
T Consensus       205 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~  273 (307)
T cd06607         205 IELAERKPPLFNMNAMSALYHIAQNDSPTLS---SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRE  273 (307)
T ss_pred             HHHHcCCCCCCCccHHHHHHHHhcCCCCCCC---chhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccc
Confidence            9999999999888766655555433222222   22457789999999999999999999999999999654

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.85  E-value=2.1e-21  Score=197.51  Aligned_cols=143  Identities=27%  Similarity=0.464  Sum_probs=110.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccC-CCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++..... .......+++.|+|||.+.+. .++.++|+||+|+++|
T Consensus       122 LH~~~i~H~dl~p~nili~~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~  198 (293)
T cd07843         122 LHDNWILHRDLKTSNLLLNNRG---ILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFA  198 (293)
T ss_pred             HHHCCeeeccCCHHHEEECCCC---cEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHH
Confidence            3557999999999999999876   7999999999876543 233445678899999998654 4688999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCCC--------------------------CCCCcccc-cCHHHHHHHHHhhccCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTELR--------------------------FPPGAIEE-LHPDCVDLCRCLLRQNP  131 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~~--------------------------~p~~~~~~-ls~~~~dLI~~cL~~dP  131 (568)
                      +|++|.+||.+....+.+.++......+                          ........ +++.+.+++++||+.+|
T Consensus       199 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  278 (293)
T cd07843         199 ELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDP  278 (293)
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCc
Confidence            9999999999877666555443211100                          00001111 47789999999999999


Q ss_pred             CCCCCHHHHHhchhH
Q 008370          132 VERITFKEFFNHRFL  146 (568)
Q Consensus       132 ~~RpTaeElL~Hpff  146 (568)
                      ++|||+.|++.||||
T Consensus       279 ~~R~t~~ell~~~~f  293 (293)
T cd07843         279 AKRISAEDALKHPYF  293 (293)
T ss_pred             cccCCHHHHhcCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.85  E-value=3.9e-21  Score=192.99  Aligned_cols=143  Identities=27%  Similarity=0.522  Sum_probs=112.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---CCCccccCCCcccChhhhccCC--CCcccchhhHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---DLADTLCGSPLYMAPEIIQNHK--YDAKADLWSVGA   75 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---~~~~t~~GT~~YmAPEvl~~~~--ys~ksDIWSlGv   75 (568)
                      +|..+++||||||+||+++.++   .+||+|||+++.....   .......|+..|++||.+....  ++.++|+||+|+
T Consensus       124 lH~~~i~H~dl~~~nil~~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~  200 (272)
T cd06629         124 LHSKGILHRDLKADNLLVDADG---ICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGC  200 (272)
T ss_pred             HhhCCeeecCCChhhEEEcCCC---eEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHH
Confidence            4667999999999999998776   7999999999765422   1223456888999999987654  788999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhc-cCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTS-TELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~-~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      ++|++++|..||...........+... ....++......++..+.+++.+||..+|.+||+++++++||||
T Consensus       201 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         201 VVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            999999999999766655444333222 12333443434568899999999999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.85  E-value=3.8e-21  Score=193.64  Aligned_cols=135  Identities=26%  Similarity=0.464  Sum_probs=109.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++......   ......+++.|+|||++.+..++.++|||||||++
T Consensus       138 lH~~~i~h~dlkp~nili~~~~---~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  214 (280)
T cd05049         138 LASQHFVHRDLATRNCLVGYDL---VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVL  214 (280)
T ss_pred             HhhCCeeccccccceEEEcCCC---eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHH
Confidence            3567999999999999999876   79999999998653322   12233457789999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++ |..||.+.+..+....+........    +...+..+.+++.+||..||.+||++.|+++
T Consensus       215 ~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         215 WEIFTYGKQPWYGLSNEEVIECITQGRLLQR----PRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHcCCcCCC----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            99998 9999988877776666654322222    2357889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.85  E-value=1.6e-21  Score=194.76  Aligned_cols=144  Identities=26%  Similarity=0.477  Sum_probs=111.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      |..||+|+||||.||+++.++.  .+||+|||++.......     ......|+..|+|||.+.+..++.++|+|++||+
T Consensus       120 H~~~i~H~~i~~~nil~~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~  197 (268)
T cd06630         120 HENQIIHRDVKGANLLIDSTGQ--RLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCV  197 (268)
T ss_pred             HhCCeecCCCCHHHEEEcCCCC--EEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHH
Confidence            5569999999999999976542  69999999997765321     1234568889999999988889999999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                      +|+|++|..||...........+.........+..+..+++++.+++.+||..+|.+||++.++++||||.
T Consensus       198 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         198 IIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            99999999999755432222222221111222333446788999999999999999999999999999983

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.85  E-value=3.6e-21  Score=195.93  Aligned_cols=147  Identities=30%  Similarity=0.512  Sum_probs=112.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+||+++.++.  .+||+|||+++..... .......|++.|++||++.+ ..++.++|+||+||++|+
T Consensus       119 H~~~i~H~dl~p~nill~~~~~--~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~  196 (294)
T PLN00009        119 HSHRVLHRDLKPQNLLIDRRTN--ALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAE  196 (294)
T ss_pred             HhCCeeCCCCCcceEEEECCCC--EEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence            4569999999999999986442  6899999999765432 22334567889999998865 457889999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCC--------------------CCCCC----cccccCHHHHHHHHHhhccCCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTEL--------------------RFPPG----AIEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~--------------------~~p~~----~~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      |++|.+||.+....+.+.++......                    .++..    ....+++.+.+++.+||..+|++||
T Consensus       197 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp  276 (294)
T PLN00009        197 MVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRI  276 (294)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCc
Confidence            99999999887766555544321100                    00000    1134578899999999999999999


Q ss_pred             CHHHHHhchhHHHhH
Q 008370          136 TFKEFFNHRFLGELR  150 (568)
Q Consensus       136 TaeElL~Hpff~~~~  150 (568)
                      ++.+++.||||..++
T Consensus       277 s~~~~l~~~~~~~~~  291 (294)
T PLN00009        277 TARAALEHEYFKDLG  291 (294)
T ss_pred             CHHHHhcCchHhHHh
Confidence            999999999998765

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=99.85  E-value=1.2e-21  Score=202.74  Aligned_cols=135  Identities=33%  Similarity=0.636  Sum_probs=120.0

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCC-cccchhhHHHHHHHHHh
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYD-AKADLWSVGAILFQLVT   82 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys-~ksDIWSlGviL~ELlt   82 (568)
                      .+++|||||.+|||++.+++   +||+|||++-.+.......++||+|.|.+||++.+.+|. +.+|.|||||+||.|+.
T Consensus       172 nrVvHRDLKLENILLD~N~N---iKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVy  248 (668)
T KOG0611|consen  172 NRVVHRDLKLENILLDQNNN---IKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVY  248 (668)
T ss_pred             ccceecccchhheeecCCCC---eeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhh
Confidence            48999999999999999984   999999999888888888999999999999999999985 66999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370           83 GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus        83 G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                      |..||.|.+...++.+|..+ .+..|     ..+.++.-||+.||..||++|.|++++..|=|+.
T Consensus       249 GtMPFDG~Dhk~lvrQIs~G-aYrEP-----~~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  249 GTMPFDGRDHKRLVRQISRG-AYREP-----ETPSDASGLIRWMLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             cccccCCchHHHHHHHhhcc-cccCC-----CCCchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence            99999999998888877655 33333     3456788999999999999999999999997763

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.85  E-value=2.9e-21  Score=198.47  Aligned_cols=147  Identities=17%  Similarity=0.339  Sum_probs=108.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--------CCccccCCCcccChhhhcc--CCCCcccch
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--------LADTLCGSPLYMAPEIIQN--HKYDAKADL   70 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--------~~~t~~GT~~YmAPEvl~~--~~ys~ksDI   70 (568)
                      ||..+|+||||||+||+++.++   .+||+|||.+.......        ......++..|+|||++..  ..++.++|+
T Consensus       117 LH~~~ivH~dlk~~Nili~~~~---~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di  193 (314)
T cd08216         117 IHSKGFIHRSVKASHILLSGDG---KVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDI  193 (314)
T ss_pred             HHHCCeecCCCCcceEEEecCC---ceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhH
Confidence            3557999999999999999876   69999999987553221        1233457778999999865  458889999


Q ss_pred             hhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCC------CC-----------------------CCCcccccCHHHHH
Q 008370           71 WSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTEL------RF-----------------------PPGAIEELHPDCVD  121 (568)
Q Consensus        71 WSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~------~~-----------------------p~~~~~~ls~~~~d  121 (568)
                      ||+||++|+|++|+.||..............+...      ..                       +......++.++.+
T Consensus       194 ws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (314)
T cd08216         194 YSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQ  273 (314)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHH
Confidence            99999999999999999876544332211111000      00                       00001123467889


Q ss_pred             HHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370          122 LCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus       122 LI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      |+.+||..||++|||++++++||||..++
T Consensus       274 li~~~l~~~P~~Rpt~~~ll~~p~~~~~~  302 (314)
T cd08216         274 FVELCLQRDPESRPSASQLLNHSFFKQCK  302 (314)
T ss_pred             HHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence            99999999999999999999999998775

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.85  E-value=3.8e-21  Score=192.36  Aligned_cols=136  Identities=21%  Similarity=0.423  Sum_probs=110.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC---ccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA---DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~---~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++........   ....++..|++||.+....++.++|||||||++
T Consensus       129 lH~~~i~H~dlkp~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il  205 (273)
T cd05035         129 LSNRNFIHRDLAARNCMLREDM---TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM  205 (273)
T ss_pred             HHhCCeeccccchheEEECCCC---eEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHH
Confidence            3556999999999999998876   6999999999876433221   122346679999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |||++ |..||.+....+.+..+........+    ...+..+.+++.+||..||.+||++.+++++
T Consensus       206 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         206 WEIATRGQTPYPGVENHEIYDYLRHGNRLKQP----EDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----cCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999 99999988877777666554333333    3668899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.85  E-value=2.4e-21  Score=191.82  Aligned_cols=139  Identities=32%  Similarity=0.527  Sum_probs=113.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCC-CCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~-ys~ksDIWSlGviL~EL   80 (568)
                      |..||+|+||||+||+++.++   .+||+|||++.............|++.|++||.+.... ++.++|+|||||++|+|
T Consensus       119 H~~~i~H~dl~~~ni~~~~~~---~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l  195 (258)
T cd06632         119 HDRNTVHRDIKGANILVDTNG---VVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEM  195 (258)
T ss_pred             HHCCcccCCCCHHHEEECCCC---CEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHH
Confidence            456999999999999998776   79999999998765544445667899999999987665 88999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      ++|+.||...........+.....   .+..+..+++.+.+++.+||..+|.+||++.+++.|||+
T Consensus       196 ~~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         196 ATGKPPWSQLEGVAAVFKIGRSKE---LPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             HhCCCCcccCcHHHHHHHHHhccc---CCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence            999999987665555444433111   122334678899999999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.85  E-value=2e-21  Score=198.31  Aligned_cols=143  Identities=23%  Similarity=0.496  Sum_probs=109.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC------------CCccccCCCcccChhhhcc-CCCCcc
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD------------LADTLCGSPLYMAPEIIQN-HKYDAK   67 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~------------~~~t~~GT~~YmAPEvl~~-~~ys~k   67 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++......            ......|++.|+|||.+.+ ..++.+
T Consensus       131 lH~~~i~H~dl~p~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  207 (311)
T cd07866         131 LHENHILHRDIKAANILIDNQG---ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTA  207 (311)
T ss_pred             HHhCCeecCCCCHHHEEECCCC---CEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCch
Confidence            3557999999999999999877   79999999997654221            1123457888999998765 457889


Q ss_pred             cchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCC----------------------CCC---CcccccCHHHHHH
Q 008370           68 ADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELR----------------------FPP---GAIEELHPDCVDL  122 (568)
Q Consensus        68 sDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~----------------------~p~---~~~~~ls~~~~dL  122 (568)
                      +|||||||++|+|++|++||.+.+.......+.......                      .++   .......+.+.+|
T Consensus       208 ~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (311)
T cd07866         208 VDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDL  287 (311)
T ss_pred             hHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHH
Confidence            999999999999999999999887766555443311100                      000   0012344688999


Q ss_pred             HHHhhccCCCCCCCHHHHHhchhH
Q 008370          123 CRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus       123 I~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      +.+||..+|.+|||+.+++.||||
T Consensus       288 i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         288 LSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HHHHcccCcccCcCHHHHhcCCCC
Confidence            999999999999999999999997

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.85  E-value=2.1e-21  Score=196.05  Aligned_cols=142  Identities=29%  Similarity=0.537  Sum_probs=110.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccC-CCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~   78 (568)
                      |..+|+||||+|+||+++.++   .+||+|||++.......  ......++..|+|||++... .++.++|+||+|+++|
T Consensus       117 H~~~i~H~dl~~~ni~~~~~~---~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~  193 (288)
T cd07833         117 HSHNIIHRDIKPENILVSESG---VLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMA  193 (288)
T ss_pred             HHCCeecCCCCHHHeEECCCC---CEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHH
Confidence            456999999999999999876   69999999998765433  34456788999999999877 8889999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccC------------------CCCCC---------CcccccCHHHHHHHHHhhccCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTE------------------LRFPP---------GAIEELHPDCVDLCRCLLRQNP  131 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~------------------~~~p~---------~~~~~ls~~~~dLI~~cL~~dP  131 (568)
                      +|++|++||.+....+.+..+.....                  ..++.         .....++..+.+|+++||..+|
T Consensus       194 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  273 (288)
T cd07833         194 ELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDP  273 (288)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCc
Confidence            99999999987765544333221100                  00000         0112347889999999999999


Q ss_pred             CCCCCHHHHHhchhH
Q 008370          132 VERITFKEFFNHRFL  146 (568)
Q Consensus       132 ~~RpTaeElL~Hpff  146 (568)
                      ++||+++++++||||
T Consensus       274 ~~Rps~~~il~~~~f  288 (288)
T cd07833         274 KERLTCDELLQHPYF  288 (288)
T ss_pred             hhcccHHHHhcCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.85  E-value=1e-22  Score=204.09  Aligned_cols=141  Identities=31%  Similarity=0.534  Sum_probs=117.1

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHh
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT   82 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELlt   82 (568)
                      ++=||||||.-|||++.++   +.||+|||.|..+++.- ..+++.|||.|||||++...+|+.++||||||+...||..
T Consensus       148 ~~KIHRDIKAGNILLNT~G---~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAE  224 (502)
T KOG0574|consen  148 LKKIHRDIKAGNILLNTDG---IAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAE  224 (502)
T ss_pred             HHHHHhhcccccEEEcccc---hhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhc
Confidence            3458999999999999988   79999999998876532 4578999999999999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           83 GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        83 G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++||....+...+..|-....+.|.  .++..+.++.||+++||.++|++|-|+-++++|+|++..
T Consensus       225 G~PPYsDIHPMRAIFMIPT~PPPTF~--KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA  289 (502)
T KOG0574|consen  225 GRPPYSDIHPMRAIFMIPTKPPPTFK--KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA  289 (502)
T ss_pred             CCCCcccccccceeEeccCCCCCCCC--ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence            99999887765544433222222222  234567889999999999999999999999999998654

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.85  E-value=2.7e-21  Score=194.62  Aligned_cols=143  Identities=28%  Similarity=0.524  Sum_probs=113.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhcc-CCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~   78 (568)
                      ||..||+||||+|+||+++.++   .+||+|||++....... ......|+..|+|||.+.. ..++.++|+|||||++|
T Consensus       117 lh~~~i~H~dl~p~ni~i~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~  193 (277)
T cd06917         117 IHKVGVIHRDIKAANILVTNTG---NVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIY  193 (277)
T ss_pred             HHhCCcccCCcCHHHEEEcCCC---CEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHH
Confidence            3567999999999999999866   79999999998765433 2334578999999998864 45788999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcc-cccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAI-EELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~-~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +|++|..||.+.........+...    .++... ...+.++.+++.+||..||.+||++.+++.|+||+...
T Consensus       194 ~ll~g~~p~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         194 EMATGNPPYSDVDAFRAMMLIPKS----KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             HHHhCCCCCCCCChhhhhhccccC----CCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence            999999999887655544333222    112221 23678999999999999999999999999999996643

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.85  E-value=4.2e-21  Score=194.80  Aligned_cols=160  Identities=27%  Similarity=0.595  Sum_probs=129.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeeccccee-cCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS-LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~-l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |.-|||+||||.+|+|++..+   ++||+|+|+++. +.+...+.++||||.|.|||++.+..|+..+|+|++||+++||
T Consensus       368 h~rgiiyrdlkldnvlldaeg---hikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfem  444 (593)
T KOG0695|consen  368 HERGIIYRDLKLDNVLLDAEG---HIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEM  444 (593)
T ss_pred             hhcCeeeeeccccceEEccCC---ceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHH
Confidence            345999999999999999988   899999999986 3466788899999999999999999999999999999999999


Q ss_pred             HhCCCCCCC-------CcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC------HHHHHhchhHH
Q 008370           81 VTGKPPFDG-------SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT------FKEFFNHRFLG  147 (568)
Q Consensus        81 ltG~~PF~g-------~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT------aeElL~Hpff~  147 (568)
                      +.|+.||.-       .+..+.+.+++-....++|.    .++-.+..+++..|.+||++|+.      +.++..|+||+
T Consensus       445 magrspfdivgm~n~d~ntedylfqvilekqiripr----slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr  520 (593)
T KOG0695|consen  445 MAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR----SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFR  520 (593)
T ss_pred             HcCCCCcceecCCCcccchhHHHHHHHhhhcccccc----eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhh
Confidence            999999962       23334333444334555554    56667778999999999999974      67999999999


Q ss_pred             HhHHhhhhhccCCCCCCchhhh
Q 008370          148 ELRQTVHAEQHSVVPETKPMVE  169 (568)
Q Consensus       148 ~~~~~~~~~~~~~~p~~~~~~~  169 (568)
                      .+.|... +++.+.|...|..+
T Consensus       521 ~idwd~l-eqk~v~ppf~p~i~  541 (593)
T KOG0695|consen  521 SIDWDLL-EQKQVLPPFQPQIT  541 (593)
T ss_pred             hCCHHHH-hhcccCCCCCCccc
Confidence            9988754 55666666655443

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.85  E-value=2e-21  Score=192.66  Aligned_cols=144  Identities=31%  Similarity=0.574  Sum_probs=117.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---------CCccccCCCcccChhhhccCCCCcccchh
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---------LADTLCGSPLYMAPEIIQNHKYDAKADLW   71 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---------~~~t~~GT~~YmAPEvl~~~~ys~ksDIW   71 (568)
                      ||..+|+||||+|+||+++.++   .+||+|||++.......         ......++..|++||.+....++.++|+|
T Consensus       109 lH~~~i~H~di~~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~  185 (265)
T cd05579         109 LHSNGIIHRDLKPDNILIDSNG---HLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWW  185 (265)
T ss_pred             HHHcCeecCCCCHHHeEEcCCC---CEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhH
Confidence            3556999999999999999877   69999999987643321         22345678899999999888888999999


Q ss_pred             hHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH---HHHHhchhHHH
Q 008370           72 SVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF---KEFFNHRFLGE  148 (568)
Q Consensus        72 SlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa---eElL~Hpff~~  148 (568)
                      |||+++|++++|..||......+....+... ...++..  ..++..+.+++.+||+.+|.+|||+   .++++||||..
T Consensus       186 slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~  262 (265)
T cd05579         186 SLGCILYEFLVGIPPFHGETPEEIFQNILNG-KIEWPED--VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKG  262 (265)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC-CcCCCcc--ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccC
Confidence            9999999999999999988877777666543 3333322  2358899999999999999999999   99999999976


Q ss_pred             hH
Q 008370          149 LR  150 (568)
Q Consensus       149 ~~  150 (568)
                      +.
T Consensus       263 ~~  264 (265)
T cd05579         263 ID  264 (265)
T ss_pred             CC
Confidence            53

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.85  E-value=4.2e-21  Score=195.32  Aligned_cols=134  Identities=27%  Similarity=0.466  Sum_probs=109.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++......   ......+++.|+|||++.+..++.++|+|||||++
T Consensus       136 lH~~~i~H~dlkp~Nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il  212 (288)
T cd05093         136 LASQHFVHRDLATRNCLVGENL---LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL  212 (288)
T ss_pred             HHhCCeeecccCcceEEEccCC---cEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHH
Confidence            3567999999999999998876   79999999998654322   12234457789999999988899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      |+|++ |..||.+....+....+........+    ...+..+.+|+.+||..+|.+|||+++++
T Consensus       213 ~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~~v~  273 (288)
T cd05093         213 WEIFTYGKQPWYQLSNNEVIECITQGRVLQRP----RTCPKEVYDLMLGCWQREPHMRLNIKEIH  273 (288)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            99998 99999988877777766654332222    35678999999999999999999999984

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.85  E-value=3e-21  Score=197.49  Aligned_cols=136  Identities=25%  Similarity=0.369  Sum_probs=107.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++   .+||+|||++..............+..|+|||++....++.++|||||||++|+|
T Consensus       135 lH~~~ivH~dlkp~Nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el  211 (297)
T cd05089         135 LSEKQFIHRDLAARNVLVGENL---ASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEI  211 (297)
T ss_pred             HHHCCcccCcCCcceEEECCCC---eEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHH
Confidence            3567999999999999998876   6999999998643221111122334569999999888899999999999999999


Q ss_pred             Hh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           81 VT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        81 lt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ++ |..||.+....+....+........    +..++..+.+|+.+||..+|.+||+++++++.
T Consensus       212 ~t~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         212 VSLGGTPYCGMTCAELYEKLPQGYRMEK----PRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             HcCCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            97 9999998887777766654322222    23578899999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.85  E-value=4e-21  Score=198.01  Aligned_cols=141  Identities=26%  Similarity=0.470  Sum_probs=109.0

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhC
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG   83 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG   83 (568)
                      .+|+||||||+|||++.++   .+||+|||+++.... ......+|++.|+|||.+.+..++.++|+|||||++|+|++|
T Consensus       119 ~~i~H~dl~p~nil~~~~~---~~~l~dfg~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g  194 (308)
T cd06615         119 HKIMHRDVKPSNILVNSRG---EIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIG  194 (308)
T ss_pred             CCEEECCCChHHEEEecCC---cEEEccCCCcccccc-cccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhC
Confidence            4899999999999998876   699999999876533 233456889999999999888899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHhccCCC---------------------------------CCCCc-ccccCHHHHHHHHHhhcc
Q 008370           84 KPPFDGSNQLQLFQNILTSTELR---------------------------------FPPGA-IEELHPDCVDLCRCLLRQ  129 (568)
Q Consensus        84 ~~PF~g~~~~~~~~~Il~~~~~~---------------------------------~p~~~-~~~ls~~~~dLI~~cL~~  129 (568)
                      +.||.+.+...... +.......                                 .++.. ...++.++.+|+.+||..
T Consensus       195 ~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  273 (308)
T cd06615         195 RYPIPPPDAKELEA-MFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKK  273 (308)
T ss_pred             CCCCCCcchhhHHH-hhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccC
Confidence            99997655333222 21110000                                 00000 113567899999999999


Q ss_pred             CCCCCCCHHHHHhchhHHHh
Q 008370          130 NPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       130 dP~~RpTaeElL~Hpff~~~  149 (568)
                      +|++||++.++++||||...
T Consensus       274 ~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         274 NPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             ChhhCcCHHHHhcChhhhhc
Confidence            99999999999999999653

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.85  E-value=3.3e-21  Score=193.34  Aligned_cols=141  Identities=28%  Similarity=0.493  Sum_probs=107.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccC--CCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNH--KYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~--~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||.||+++.+.  ..+||+|||++....... ......|++.|+|||++...  .++.++|+||+|+++
T Consensus       124 lH~~~i~h~dl~p~nil~~~~~--~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl  201 (268)
T cd06624         124 LHDNQIVHRDIKGDNVLVNTYS--GVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTI  201 (268)
T ss_pred             HHHCCEeecCCCHHHEEEcCCC--CeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHH
Confidence            3567999999999999997633  269999999997654322 23334688999999998654  378899999999999


Q ss_pred             HHHHhCCCCCCCCcHHHH-HHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           78 FQLVTGKPPFDGSNQLQL-FQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~-~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |+|++|+.||........ .....   .....+..+..+++++.+|+.+||..+|.+||++.+++.||||
T Consensus       202 ~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         202 VEMATGKPPFIELGEPQAAMFKVG---MFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             HHHHhCCCCCccccChhhhHhhhh---hhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence            999999999975432221 11111   1111122334678899999999999999999999999999996

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.84  E-value=3.9e-21  Score=201.51  Aligned_cols=136  Identities=29%  Similarity=0.416  Sum_probs=107.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++.+....   ......++..|+|||++.+..++.++|||||||++|
T Consensus       190 H~~~ivHrDikp~Nill~~~~---~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~  266 (337)
T cd05054         190 ASRKCIHRDLAARNILLSENN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLW  266 (337)
T ss_pred             HhCCeecCCCCcceEEEeCCC---cEEEeccccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHH
Confidence            556999999999999999766   79999999998764322   122345567899999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+....+.+...+......   ..+....+++.+++.+||+.+|++||+++++++|
T Consensus       267 el~t~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         267 EIFSLGASPYPGVQIDEEFCRRLKEGTRM---RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             HHHHcCCCCCCCCCccHHHHHHHhccCCC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            9998 999998755444443333332211   1223567899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.84  E-value=2.7e-21  Score=197.31  Aligned_cols=143  Identities=24%  Similarity=0.444  Sum_probs=106.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhccC-CCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQNH-KYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlG   74 (568)
                      ||..+|+|+||||+||+++.++   .+||+|||++.......     ......++..|+|||.+.+. .++.++|+||+|
T Consensus       135 lH~~~i~H~dl~p~nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  211 (310)
T cd07865         135 IHRNKILHRDMKAANILITKDG---ILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAG  211 (310)
T ss_pred             HHHCCeeccCCCHHHEEECCCC---cEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHH
Confidence            3556999999999999998876   79999999997654322     12344678889999988654 478899999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhcc---C---------------CCCCCCc---------ccccCHHHHHHHHHhh
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTST---E---------------LRFPPGA---------IEELHPDCVDLCRCLL  127 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~---~---------------~~~p~~~---------~~~ls~~~~dLI~~cL  127 (568)
                      +++|+|++|.+||.+.+.......+....   .               ..++...         .......+.+||.+||
T Consensus       212 ~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l  291 (310)
T cd07865         212 CIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLL  291 (310)
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHh
Confidence            99999999999998876554433222210   0               0011100         0012457789999999


Q ss_pred             ccCCCCCCCHHHHHhchhH
Q 008370          128 RQNPVERITFKEFFNHRFL  146 (568)
Q Consensus       128 ~~dP~~RpTaeElL~Hpff  146 (568)
                      ..||.+|||++++++||||
T Consensus       292 ~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         292 VLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             cCChhhccCHHHHhcCCCC
Confidence            9999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.84  E-value=6e-21  Score=188.53  Aligned_cols=136  Identities=26%  Similarity=0.437  Sum_probs=113.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+||+++.++   .+||+|||.++......   ......+++.|+|||.+....++.++|+||+||++
T Consensus       121 lH~~~i~H~di~p~nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  197 (262)
T cd00192         121 LASKKFVHRDLAARNCLVGEDL---VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLL  197 (262)
T ss_pred             HHcCCcccCccCcceEEECCCC---cEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHH
Confidence            3567999999999999999876   69999999998765432   23345678899999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+|++ |..||......+....+........+    ..+++++.+++.+||..+|.+||++.+++++
T Consensus       198 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         198 WEIFTLGATPYPGLSNEEVLEYLRKGYRLPKP----EYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC----ccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            99999 69999988877777766654333333    3568899999999999999999999999765

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.84  E-value=4.4e-21  Score=204.21  Aligned_cols=136  Identities=25%  Similarity=0.395  Sum_probs=106.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..||+||||||+|||++.++   ++||+|||+++.......   .....+++.|||||++....++.++|||||||++
T Consensus       228 LH~~giiHrDLkp~Nil~~~~~---~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil  304 (374)
T cd05106         228 LASKNCIHRDVAARNVLLTDGR---VAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILL  304 (374)
T ss_pred             HHHCCEEeccCchheEEEeCCC---eEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHH
Confidence            4567999999999999998766   799999999987543221   1223455679999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++ |+.||........+..+.....   ....+...++++.+++.+||+.||.+||++.++++
T Consensus       305 ~ellt~G~~Pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         305 WEIFSLGKSPYPGILVNSKFYKMVKRGY---QMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQ  367 (374)
T ss_pred             HHHHhCCCCCCccccccHHHHHHHHccc---CccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99997 9999987655444444443321   11222356789999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.84  E-value=3.6e-21  Score=194.23  Aligned_cols=136  Identities=24%  Similarity=0.423  Sum_probs=109.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.......   .....+++.|+|||++.+..++.++|+|||||++
T Consensus       135 lH~~~~vH~dlkp~Nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l  211 (277)
T cd05062         135 LNANKFVHRDLAARNCMVAEDF---TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL  211 (277)
T ss_pred             HHHCCcccCCcchheEEEcCCC---CEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHH
Confidence            3556999999999999999876   799999999976543221   1223457789999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+|++ |..||.+.+..+....+........+    ...+..+.+++.+||+.+|.+||++.|++++
T Consensus       212 ~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         212 WEIATLAEQPYQGMSNEQVLRFVMEGGLLDKP----DNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999 78999988877766655544322222    3567889999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.84  E-value=2.5e-21  Score=201.76  Aligned_cols=147  Identities=30%  Similarity=0.536  Sum_probs=112.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhcc-CCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGv   75 (568)
                      |..+|+||||||+||+++.++   .+||+|||+++......     ......|+..|+|||++.. ..++.++|+||+||
T Consensus       124 H~~~ivH~dlkp~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~  200 (334)
T cd07855         124 HSANVIHRDLKPSNLLVNEDC---ELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGC  200 (334)
T ss_pred             HHCCeecCCCCHHHEEEcCCC---cEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHH
Confidence            557999999999999999877   69999999998654322     1234578899999999865 46889999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCC-------------------CCC---C----CcccccCHHHHHHHHHhhcc
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTEL-------------------RFP---P----GAIEELHPDCVDLCRCLLRQ  129 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~-------------------~~p---~----~~~~~ls~~~~dLI~~cL~~  129 (568)
                      ++|+|++|+.||.+.+....+..+......                   .++   .    ......+.++.+++++||+.
T Consensus       201 ~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  280 (334)
T cd07855         201 IFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQF  280 (334)
T ss_pred             HHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccC
Confidence            999999999999877654433322211000                   000   0    01134578899999999999


Q ss_pred             CCCCCCCHHHHHhchhHHHhHH
Q 008370          130 NPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       130 dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      +|.+||++.+++.||||.....
T Consensus       281 ~P~~Rpt~~~~l~~~~~~~~~~  302 (334)
T cd07855         281 DPEERITVEQALQHPFLAQYHD  302 (334)
T ss_pred             ChhhCcCHHHHHhChhhhhccC
Confidence            9999999999999999976543

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.84  E-value=3.7e-21  Score=197.58  Aligned_cols=147  Identities=33%  Similarity=0.577  Sum_probs=116.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----------------CCccccCCCcccChhhhccCCC
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----------------LADTLCGSPLYMAPEIIQNHKY   64 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----------------~~~t~~GT~~YmAPEvl~~~~y   64 (568)
                      ||..+|+||||||.||+++.++   .+||+|||+++......                ......|+..|+|||.+.+..+
T Consensus       117 lH~~~i~H~dl~p~NIll~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~  193 (305)
T cd05609         117 LHNYGIVHRDLKPDNLLITSMG---HIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGY  193 (305)
T ss_pred             HHHCCccccCCchHHEEECCCC---CEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCC
Confidence            3567999999999999998776   79999999987421100                1112467888999999988889


Q ss_pred             CcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC---HHHHH
Q 008370           65 DAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT---FKEFF  141 (568)
Q Consensus        65 s~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT---aeElL  141 (568)
                      +.++|+|||||++|+|++|..||.+....+.+..+.... ...+.. ...++.++.+++.+||..+|.+||+   +.+++
T Consensus       194 ~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll  271 (305)
T cd05609         194 GKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDD-IEWPEG-DEALPADAQDLISRLLRQNPLERLGTGGAFEVK  271 (305)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc-cCCCCc-cccCCHHHHHHHHHHhccChhhccCccCHHHHH
Confidence            999999999999999999999999888777666665432 222222 1256888999999999999999998   78999


Q ss_pred             hchhHHHhHHh
Q 008370          142 NHRFLGELRQT  152 (568)
Q Consensus       142 ~Hpff~~~~~~  152 (568)
                      +||||....+.
T Consensus       272 ~~~~~~~~~~~  282 (305)
T cd05609         272 QHRFFLGLDWN  282 (305)
T ss_pred             hCccccCCCHH
Confidence            99999765544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.84  E-value=3e-21  Score=196.38  Aligned_cols=142  Identities=26%  Similarity=0.454  Sum_probs=113.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.......   .....++..|+|||.+.+..++.++|+|||||++
T Consensus       135 lH~~~i~H~dikp~nili~~~~---~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l  211 (288)
T cd05061         135 LNAKKFVHRDLAARNCMVAHDF---TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVL  211 (288)
T ss_pred             HHhCCCcCCCCChheEEEcCCC---cEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHH
Confidence            4567999999999999999876   699999999986543221   1223456779999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh------chhHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN------HRFLGEL  149 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~------Hpff~~~  149 (568)
                      |+|++ |..||.+....+....+........+    ...++.+.+++.+||+.+|.+||++.++++      ||||..+
T Consensus       212 ~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~  286 (288)
T cd05061         212 WEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP----DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV  286 (288)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence            99998 78999888777766666554333333    345789999999999999999999999875      6666543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.84  E-value=4.5e-21  Score=190.89  Aligned_cols=141  Identities=29%  Similarity=0.541  Sum_probs=110.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC-----CccccCCCcccChhhhccCC---CCcccchhh
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-----ADTLCGSPLYMAPEIIQNHK---YDAKADLWS   72 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~-----~~t~~GT~~YmAPEvl~~~~---ys~ksDIWS   72 (568)
                      ||..+|+|+||||+||+++.++   .+||+|||++........     .....+++.|++||++....   ++.++|+|+
T Consensus       115 lh~~~i~H~dl~~~nil~~~~~---~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s  191 (264)
T cd06626         115 LHSHGIVHRDIKPANIFLDHNG---VIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWS  191 (264)
T ss_pred             HHHCCcccCCCCHHHEEECCCC---CEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHH
Confidence            3557999999999999999866   699999999987653322     22356788999999997765   788999999


Q ss_pred             HHHHHHHHHhCCCCCCCCc-HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           73 VGAILFQLVTGKPPFDGSN-QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        73 lGviL~ELltG~~PF~g~~-~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      ||+++|++++|+.||.+.. .......+.......+|..  ..+++.+.+++.+||+.+|.+||++++++.|||+
T Consensus       192 ~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         192 LGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDS--LQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcc--cccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            9999999999999997653 3333333333223333321  2457889999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.84  E-value=2.6e-21  Score=195.40  Aligned_cols=142  Identities=26%  Similarity=0.439  Sum_probs=109.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccC-CCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||+|+||+++.++   .+||+|||+++...... ......+++.|+|||++.+. .++.++|+|||||++|+
T Consensus       116 H~~~~~H~dl~p~nil~~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~  192 (283)
T cd07835         116 HSHRVLHRDLKPQNLLIDREG---ALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAE  192 (283)
T ss_pred             HHCCeeCCCCCHHHEEEcCCC---cEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHH
Confidence            456999999999999999866   79999999997654322 22334568899999987654 57889999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCC------------------------CCCCCcccccCHHHHHHHHHhhccCCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTEL------------------------RFPPGAIEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~------------------------~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      |++|++||.+.+....+.++......                        .........++..+.+++.+||+.+|.+||
T Consensus       193 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp  272 (283)
T cd07835         193 MVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRI  272 (283)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCc
Confidence            99999999887765544443321100                        000112235668899999999999999999


Q ss_pred             CHHHHHhchhH
Q 008370          136 TFKEFFNHRFL  146 (568)
Q Consensus       136 TaeElL~Hpff  146 (568)
                      |+++++.||||
T Consensus       273 t~~~il~~~~~  283 (283)
T cd07835         273 SAKAALQHPYF  283 (283)
T ss_pred             CHHHHhcCCCC
Confidence            99999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.84  E-value=3e-21  Score=196.59  Aligned_cols=147  Identities=27%  Similarity=0.456  Sum_probs=113.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~   78 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++..... .......+++.|+|||.+.+ ..++.++|+|||||++|
T Consensus       118 lH~~~i~H~dl~p~nill~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~  194 (298)
T cd07841         118 LHSNWILHRDLKPNNLLIASDG---VLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFA  194 (298)
T ss_pred             HHhCCeeecCCChhhEEEcCCC---CEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHH
Confidence            4667999999999999999876   6999999999876543 22333456788999998854 46788999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCCCC-------------------C----CCcccccCHHHHHHHHHhhccCCCCCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTELRF-------------------P----PGAIEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~~~-------------------p----~~~~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      +|++|.+||.+....+.+.++........                   +    .......+..+.+|+.+||..+|++||
T Consensus       195 e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~  274 (298)
T cd07841         195 ELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRI  274 (298)
T ss_pred             HHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCc
Confidence            99999999988776665555432210000                   0    001133467899999999999999999


Q ss_pred             CHHHHHhchhHHHhH
Q 008370          136 TFKEFFNHRFLGELR  150 (568)
Q Consensus       136 TaeElL~Hpff~~~~  150 (568)
                      ++.|++.|+||....
T Consensus       275 s~~e~l~~~~~~~~~  289 (298)
T cd07841         275 TARQALEHPYFSNDP  289 (298)
T ss_pred             CHHHHhhCccccCCC
Confidence            999999999997643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.84  E-value=4.2e-21  Score=192.30  Aligned_cols=139  Identities=25%  Similarity=0.483  Sum_probs=110.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC----CCCccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ----DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~----~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      ||..+|+|+||||+||+++.++   .+||+|||+++.....    .......|+..|+|||.+.+..++.++|+|||||+
T Consensus       122 lH~~~i~H~dl~p~nil~~~~~---~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i  198 (265)
T cd06652         122 LHSNMIVHRDIKGANILRDSVG---NVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCT  198 (265)
T ss_pred             HHhCCEecCCCCHHHEEecCCC---CEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHH
Confidence            3567999999999999998776   7999999999765421    12234568899999999988889999999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      +|+|++|+.||........+..+.....   .+..+..++..+.+++.+||. +|++||+++++++|||+
T Consensus       199 l~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~  264 (265)
T cd06652         199 VVEMLTEKPPWAEFEAMAAIFKIATQPT---NPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFV  264 (265)
T ss_pred             HHHHhhCCCCCCccchHHHHHHHhcCCC---CCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCccc
Confidence            9999999999987665554444432211   122334567889999999995 89999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.84  E-value=7.8e-21  Score=192.07  Aligned_cols=143  Identities=29%  Similarity=0.504  Sum_probs=116.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+|+||||.||+++.++   .++|+|||+++.+.... ......|+..|++||.+.+..++.++|+||+||++|+
T Consensus       117 lh~~~i~h~dl~p~Ni~i~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~  193 (277)
T cd06641         117 LHSEKKIHRDIKAANVLLSEHG---EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIE  193 (277)
T ss_pred             HccCCeecCCCCHHhEEECCCC---CEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHH
Confidence            4677999999999999998776   69999999998765432 2234568889999999988888999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      |++|..||...........+.....    +.....++.++.+++.+||..+|.+||++.++++||||....
T Consensus       194 l~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~  260 (277)
T cd06641         194 LAKGEPPHSELHPMKVLFLIPKNNP----PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFA  260 (277)
T ss_pred             HHcCCCCCCccchHHHHHHHhcCCC----CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence            9999999987776555554433222    222345678999999999999999999999999999997653

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.84  E-value=2.4e-21  Score=201.89  Aligned_cols=147  Identities=29%  Similarity=0.487  Sum_probs=113.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC------CCccccCCCcccChhhhcc-CCCCcccchhhHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD------LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVG   74 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~------~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlG   74 (568)
                      |..||+||||||+||+++.++   .+||+|||+++......      ......|++.|+|||++.+ ..++.++|+||||
T Consensus       124 H~~~i~H~dl~p~nill~~~~---~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG  200 (337)
T cd07852         124 HSGNVIHRDLKPSNILLNSDC---RVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVG  200 (337)
T ss_pred             HHCCeecCCCCHHHEEEcCCC---cEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHH
Confidence            557999999999999999877   79999999998654322      2234568999999998754 4578889999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCC--------------------------CCCCCcccccCHHHHHHHHHhhc
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTEL--------------------------RFPPGAIEELHPDCVDLCRCLLR  128 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~--------------------------~~p~~~~~~ls~~~~dLI~~cL~  128 (568)
                      |++|+|++|+.||.+....+...++......                          .........++..+.+++.+||+
T Consensus       201 ~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~  280 (337)
T cd07852         201 CILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLV  280 (337)
T ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhcc
Confidence            9999999999999877655544433222100                          00111123367889999999999


Q ss_pred             cCCCCCCCHHHHHhchhHHHhHH
Q 008370          129 QNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       129 ~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      .+|.+||++.++++||||.....
T Consensus       281 ~~P~~Rps~~~il~~~~~~~~~~  303 (337)
T cd07852         281 FNPNKRLTAEEALEHPYVAQFHN  303 (337)
T ss_pred             CCcccccCHHHHhhChhhhhhcc
Confidence            99999999999999999988643

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.84  E-value=2.6e-21  Score=197.95  Aligned_cols=145  Identities=28%  Similarity=0.507  Sum_probs=115.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+||+++.++   .+||+|||++....... ......|++.|++||.+....++.++|+|||||++|+
T Consensus       131 LH~~gi~H~dL~p~Nili~~~~---~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~  207 (293)
T cd06647         131 LHSNQVIHRDIKSDNILLGMDG---SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE  207 (293)
T ss_pred             HHhCCEeeccCCHHHEEEcCCC---CEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHH
Confidence            3567999999999999998876   69999999987655433 2234568889999999988888999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +++|+.||...+.......+.......++  .+..++..+.+++.+||..+|.+||++++++.|+||...+
T Consensus       208 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         208 MVEGEPPYLNENPLRALYLIATNGTPELQ--NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             HHhCCCCCCCCChhhheeehhcCCCCCCC--CccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence            99999999877655443333322222222  2335678899999999999999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.84  E-value=6e-21  Score=194.47  Aligned_cols=135  Identities=26%  Similarity=0.452  Sum_probs=109.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++......   ......|+..|+|||++.+..++.++|||||||++
T Consensus       139 lH~~~i~H~dlkp~Nil~~~~~---~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  215 (291)
T cd05094         139 LASQHFVHRDLATRNCLVGANL---LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVIL  215 (291)
T ss_pred             HHhCCeeecccCcceEEEccCC---cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHH
Confidence            4667999999999999999876   79999999997654322   22334567889999999988899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++ |..||...+..+....+........    ....+..+.+++.+||..+|.+||++.++++
T Consensus       216 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         216 WEIFTYGKQPWFQLSNTEVIECITQGRVLER----PRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHhCCCCCCC----CccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            99998 9999988777766665544322222    2346788999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.84  E-value=4.8e-21  Score=197.88  Aligned_cols=136  Identities=24%  Similarity=0.325  Sum_probs=107.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC---ccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA---DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~---~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.+......   ....++..|+|||.+....++.++|||||||++
T Consensus       125 LH~~~iiH~dlkp~Nill~~~~---~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l  201 (316)
T cd05108         125 LEERRLVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV  201 (316)
T ss_pred             HHhcCeeccccchhheEecCCC---cEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHH
Confidence            4667999999999999998876   6999999999876543322   122345679999999988999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |||++ |..||.+....+....+........+    ...+.++.+++.+||..+|.+||++.+++.+
T Consensus       202 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         202 WELMTFGSKPYDGIPASEISSILEKGERLPQP----PICTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99997 99999887765554433322222222    3457789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.84  E-value=8.3e-21  Score=190.18  Aligned_cols=135  Identities=26%  Similarity=0.455  Sum_probs=108.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCc--cccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD--TLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~--t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++.........  ...++..|+|||.+.+..++.++|||||||++|
T Consensus       120 lH~~~i~H~dlkp~nil~~~~~---~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~  196 (263)
T cd05052         120 LEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW  196 (263)
T ss_pred             HHhCCEeecccCcceEEEcCCC---cEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHH
Confidence            3567999999999999998776   69999999998765432211  223456799999999889999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|++ |..||.+.+..+....+.......    .+...+..+.+++.+||..+|++||++.++++
T Consensus       197 el~t~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         197 EIATYGMSPYPGIDLSQVYELLEKGYRME----RPEGCPPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHHCCCCCC----CCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            9998 999999887776666655432222    23467889999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.84  E-value=2.2e-21  Score=198.71  Aligned_cols=146  Identities=27%  Similarity=0.450  Sum_probs=106.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCC-CCCcEEEeecccceecCCCC----CCccccCCCcccChhhhcc-CCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNE-VTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~-~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlG   74 (568)
                      ||..+|+||||||+||+++.++ ..+.+||+|||+++......    .....++++.|+|||++.+ ..++.++|+||||
T Consensus       124 lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG  203 (316)
T cd07842         124 LHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIG  203 (316)
T ss_pred             HHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHH
Confidence            4567999999999999998822 13479999999998754322    1234578899999998866 4578899999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHH---------HHHHHHhcc-------------------------CCCCCC-C------ccc
Q 008370           75 AILFQLVTGKPPFDGSNQLQ---------LFQNILTST-------------------------ELRFPP-G------AIE  113 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~---------~~~~Il~~~-------------------------~~~~p~-~------~~~  113 (568)
                      |++|+|++|++||.+.....         .+..++...                         ...++. .      ...
T Consensus       204 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (316)
T cd07842         204 CIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHK  283 (316)
T ss_pred             HHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhcc
Confidence            99999999999998654321         111111100                         000110 0      001


Q ss_pred             ccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370          114 ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus       114 ~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      ..+..+.+++.+||..||++|||+.|++.||||
T Consensus       284 ~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         284 KPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             CCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            345689999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.84  E-value=5.9e-21  Score=195.67  Aligned_cols=144  Identities=25%  Similarity=0.515  Sum_probs=115.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||.||+++.++   .+||+|||++....... ......|++.|++||.+....++.++|+||+|+++|+|
T Consensus       133 H~~givH~dl~p~Nilv~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el  209 (292)
T cd06657         133 HAQGVIHRDIKSDSILLTHDG---RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM  209 (292)
T ss_pred             HHCCeecCCCCHHHEEECCCC---CEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHH
Confidence            456999999999999999876   69999999987654322 22345788999999999888889999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|..||.+.........+.......+.  ....+++.+.+++.+||..+|.+||++.+++.||||....
T Consensus       210 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~  277 (292)
T cd06657         210 VDGEPPYFNEPPLKAMKMIRDNLPPKLK--NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG  277 (292)
T ss_pred             HhCCCCCCCCCHHHHHHHHHhhCCcccC--CcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence            9999999887766555444332221111  2235678899999999999999999999999999997654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.84  E-value=2.8e-21  Score=202.38  Aligned_cols=147  Identities=28%  Similarity=0.528  Sum_probs=111.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhcc-CCCCcccchhhHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGA   75 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGv   75 (568)
                      ||..||+||||||+||+++..+  ..+||+|||+++.+....    ......|+..|+|||.+.. ..++.++|||||||
T Consensus       130 LH~~givH~dikp~Nili~~~~--~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGv  207 (342)
T cd07854         130 IHSANVLHRDLKPANVFINTED--LVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGC  207 (342)
T ss_pred             HHhCCcccCCCCHHHEEEcCCC--ceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHH
Confidence            3567999999999999997544  268999999998654221    1123467889999998754 56788999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCCCC------------------------C-CCcccccCHHHHHHHHHhhccC
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTELRF------------------------P-PGAIEELHPDCVDLCRCLLRQN  130 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~------------------------p-~~~~~~ls~~~~dLI~~cL~~d  130 (568)
                      ++|+|++|+.||.+.+..+....+........                        + ......++.++.+|+.+||..|
T Consensus       208 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  287 (342)
T cd07854         208 IFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFN  287 (342)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCC
Confidence            99999999999988776555544433211100                        0 0011246778999999999999


Q ss_pred             CCCCCCHHHHHhchhHHHh
Q 008370          131 PVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       131 P~~RpTaeElL~Hpff~~~  149 (568)
                      |.+|||+++++.||||+.+
T Consensus       288 P~~R~t~~ell~h~~~~~~  306 (342)
T cd07854         288 PMDRLTAEEALMHPYMSCY  306 (342)
T ss_pred             chhccCHHHHhCCCccccc
Confidence            9999999999999999754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.84  E-value=6.7e-21  Score=192.87  Aligned_cols=136  Identities=23%  Similarity=0.441  Sum_probs=109.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++......   ......++..|+|||++.+..++.++|+|||||++
T Consensus       140 lH~~~i~H~dlkp~nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il  216 (283)
T cd05090         140 LSSHFFVHKDLAARNILIGEQL---HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVL  216 (283)
T ss_pred             HHhcCeehhccccceEEEcCCC---cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHH
Confidence            3567999999999999999776   69999999998754332   22334566779999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+|++ |..||.+.........+.......    .+..+++.+.+++.+||+.+|.+||++.+++++
T Consensus       217 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         217 WEIFSFGLQPYYGFSNQEVIEMVRKRQLLP----CSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHcCCcCC----CCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            99998 999998877666665554433222    224568899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.84  E-value=2.5e-21  Score=202.92  Aligned_cols=144  Identities=31%  Similarity=0.480  Sum_probs=113.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+||+++.++   .+||+|||++......  .....++..|+|||.+.+ ..++.++||||+||++|+
T Consensus       134 LH~~gi~H~dlkp~Nill~~~~---~~kL~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~e  208 (343)
T cd07851         134 IHSAGIIHRDLKPSNIAVNEDC---ELKILDFGLARHTDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  208 (343)
T ss_pred             HHHCCeecCCCCHHHeEECCCC---CEEEcccccccccccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHH
Confidence            4567999999999999999876   6999999999865432  344578889999999865 367889999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCC-------------------C----C---CcccccCHHHHHHHHHhhccCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRF-------------------P----P---GAIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~-------------------p----~---~~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      |++|+.||.+.+..+.+..+........                   +    .   ......++.+.+|+.+||..+|.+
T Consensus       209 lltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~  288 (343)
T cd07851         209 LLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDK  288 (343)
T ss_pred             HHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhh
Confidence            9999999988777666555543211000                   0    0   011234788999999999999999


Q ss_pred             CCCHHHHHhchhHHHh
Q 008370          134 RITFKEFFNHRFLGEL  149 (568)
Q Consensus       134 RpTaeElL~Hpff~~~  149 (568)
                      |||+.+++.||||...
T Consensus       289 Rpt~~ell~h~~~~~~  304 (343)
T cd07851         289 RITAAEALAHPYLAEY  304 (343)
T ss_pred             CCCHHHHhcCCCcccc
Confidence            9999999999999754

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.84  E-value=5.5e-21  Score=192.10  Aligned_cols=142  Identities=31%  Similarity=0.539  Sum_probs=110.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccC-CCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||+|+||+++.++   .+||+|||+++...... ......++..|+|||.+... .++.++|+|+|||++|+
T Consensus       115 H~~~i~H~~l~~~ni~~~~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~  191 (282)
T cd07829         115 HSHRILHRDLKPQNILINRDG---VLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAE  191 (282)
T ss_pred             HHCCcccCCCChheEEEcCCC---CEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHH
Confidence            456899999999999999876   69999999998764332 23344567789999998766 78899999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccC-----------------CCCCC-------CcccccCHHHHHHHHHhhccCCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTE-----------------LRFPP-------GAIEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~-----------------~~~p~-------~~~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      +++|.+||.+.+....+.++.....                 ..++.       ......+..+.+++++||..+|.+||
T Consensus       192 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp  271 (282)
T cd07829         192 MITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRI  271 (282)
T ss_pred             HHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCC
Confidence            9999999988776655544432110                 00010       11123467899999999999999999


Q ss_pred             CHHHHHhchhH
Q 008370          136 TFKEFFNHRFL  146 (568)
Q Consensus       136 TaeElL~Hpff  146 (568)
                      ++++++.||||
T Consensus       272 ~~~~~l~~p~~  282 (282)
T cd07829         272 SAKEALKHPYF  282 (282)
T ss_pred             CHHHHhhCcCC
Confidence            99999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.84  E-value=7e-21  Score=187.80  Aligned_cols=139  Identities=26%  Similarity=0.485  Sum_probs=114.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC-CccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~-~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+||+++.++   .+||+|||++........ .....|+..|++||.+.+..++.++|+|++|+++|+
T Consensus       115 lH~~~i~H~dl~p~ni~i~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~  191 (254)
T cd06627         115 LHEQGVIHRDIKAANILTTKDG---VVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIE  191 (254)
T ss_pred             HhhCCcccCCCCHHHEEECCCC---CEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHH
Confidence            4677999999999999998865   799999999987654332 234578889999999988778899999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|..||...........+.......    .+..++..+.+++.+||..+|++||++.+++.||||
T Consensus       192 l~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         192 LLTGNPPYYDLNPMAALFRIVQDDHPP----LPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             HHhCCCCCCCccHHHHHHHHhccCCCC----CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence            999999998776655554444332222    234668899999999999999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.84  E-value=6.7e-21  Score=190.03  Aligned_cols=138  Identities=30%  Similarity=0.572  Sum_probs=113.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+|+||||+||+++.+    .+||+|||+++..... .......|++.|++||.+.+..++.++|+||+|+++|+
T Consensus       122 lH~~~i~h~~l~~~nili~~~----~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~  197 (260)
T cd08222         122 MHQRRILHRDLKAKNIFLKNN----LLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYE  197 (260)
T ss_pred             HHHcCccccCCChhheEeecC----CEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHH
Confidence            356799999999999999753    4899999999876432 23345678899999999988888999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|..||.+.........+.......    .....+.++.+++.+||..+|.+||++.++++||||
T Consensus       198 l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         198 MCCLAHAFEGQNFLSVVLRIVEGPTPS----LPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HHhCCCCCCCccHHHHHHHHHcCCCCC----CcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence            999999998777666665554432222    234567899999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.84  E-value=8.7e-21  Score=187.66  Aligned_cols=138  Identities=25%  Similarity=0.468  Sum_probs=114.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      +|..||+|+||+|.||+++.++   .+||+|||+++..... ......|++.|++||.+.+..++.++|+||+|+++|+|
T Consensus       119 lh~~~i~h~~l~~~ni~~~~~~---~~kl~d~g~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l  194 (256)
T cd08530         119 LHEQKILHRDLKSANILLVAND---LVKIGDLGISKVLKKN-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEM  194 (256)
T ss_pred             HhhCCcccCCCCcceEEEecCC---cEEEeeccchhhhccC-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHH
Confidence            3567999999999999999866   6999999999876544 33446688999999999988899999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      ++|+.||...+.......+.......    .....+.++.+++.+||..+|.+||++.++++||++
T Consensus       195 ~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         195 ATFAPPFEARSMQDLRYKVQRGKYPP----IPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             HhCCCCCCCCCHHHHHHHHhcCCCCC----CchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence            99999999887766555554432222    223567899999999999999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.84  E-value=3.8e-21  Score=191.56  Aligned_cols=138  Identities=25%  Similarity=0.485  Sum_probs=112.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..+|+|+||||+||+++.++   .+||+|||++.............|+..|++||++....++.++|+||+|+++|+|+
T Consensus       117 h~~~i~h~dl~~~nil~~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~  193 (258)
T cd05578         117 HSKGIIHRDIKPDNILLDEQG---HVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECL  193 (258)
T ss_pred             HhCCeeccCCCHHHeEEcCCC---CEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHH
Confidence            456999999999999999876   69999999998765544445567888999999998888999999999999999999


Q ss_pred             hCCCCCCCCcH--HHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH--HHHHhchhH
Q 008370           82 TGKPPFDGSNQ--LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF--KEFFNHRFL  146 (568)
Q Consensus        82 tG~~PF~g~~~--~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa--eElL~Hpff  146 (568)
                      +|..||.....  ...+...........    +...+..+.+++.+||..+|.+||++  +|+++||||
T Consensus       194 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         194 RGKRPYRGHSRTIRDQIRAKQETADVLY----PATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             hCCCCCCCCCccHHHHHHHHhccccccC----cccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence            99999987763  222222222122222    23567899999999999999999999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.84  E-value=6.1e-21  Score=189.77  Aligned_cols=135  Identities=29%  Similarity=0.514  Sum_probs=111.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+|+||||+||+++.++   .++|+|||+++...... ......|++.|+|||++.+..++.++|+||+|+++|+
T Consensus       116 lH~~~i~H~dl~p~nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~  192 (255)
T cd08219         116 IHEKRVLHRDIKSKNIFLTQNG---KVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYE  192 (255)
T ss_pred             HhhCCcccCCCCcceEEECCCC---cEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhhee
Confidence            3567999999999999998776   69999999998765432 2334678999999999988889999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |++|..||...+.......+........+    ..++..+.+|+.+||..||.+||++.+++.
T Consensus       193 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  251 (255)
T cd08219         193 LCTLKHPFQANSWKNLILKVCQGSYKPLP----SHYSYELRSLIKQMFKRNPRSRPSATTILS  251 (255)
T ss_pred             hhhccCCCCCCCHHHHHHHHhcCCCCCCC----cccCHHHHHHHHHHHhCCcccCCCHHHHhh
Confidence            99999999988776666666544322222    356788999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.84  E-value=7.6e-21  Score=218.98  Aligned_cols=133  Identities=23%  Similarity=0.466  Sum_probs=113.9

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccc-cC--CCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTL-CG--SPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~-~G--T~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ..++|||||.++|+||+...   +|||+|||+||.+...+.+... .+  ...|||||.+....|+.|+|||||||++||
T Consensus       820 ~~~fvHRDLAaRNCLL~~~r---~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWE  896 (1025)
T KOG1095|consen  820 SKHFVHRDLAARNCLLDERR---VVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWE  896 (1025)
T ss_pred             hCCCcCcchhhhheeecccC---cEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHH
Confidence            35899999999999999875   8999999999966554433221 22  246999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +++ |..||.+.++.+++..++.+++++.|.    .++..+.++|.+||+.+|++||++..+++
T Consensus       897 ifslG~~PY~~~~n~~v~~~~~~ggRL~~P~----~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  897 IFSLGATPYPSRSNFEVLLDVLEGGRLDPPS----YCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             HHhCCCCCCCCcchHHHHHHHHhCCccCCCC----CCChHHHHHHHHHccCChhhCccHHHHHh
Confidence            999 999999999999998888887666555    56777889999999999999999999876

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.84  E-value=9.6e-21  Score=188.72  Aligned_cols=133  Identities=22%  Similarity=0.380  Sum_probs=108.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++......  ....++..|+|||++....++.++|||||||++|+|
T Consensus       118 lH~~~i~H~dlkp~nil~~~~~---~~kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l  192 (256)
T cd05082         118 LEANNFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI  192 (256)
T ss_pred             HHhCCEeccccchheEEEcCCC---cEEecCCccceeccccC--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHH
Confidence            4667999999999999998877   79999999998654322  234456679999999888899999999999999999


Q ss_pred             Hh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           81 VT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        81 lt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ++ |+.||......+....+.....    +.....+++.+.+++.+||..+|++|||+.++++
T Consensus       193 ~~~g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         193 YSFGRVPYPRIPLKDVVPRVEKGYK----MDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             HhCCCCCCCCCCHHHHHHHHhcCCC----CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            97 9999988776666655543322    2233467889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.84  E-value=7.6e-21  Score=192.67  Aligned_cols=135  Identities=25%  Similarity=0.466  Sum_probs=109.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.......   .....+++.|+|||.+.+..++.++|||||||++
T Consensus       138 LH~~~i~H~dlkp~nil~~~~~---~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  214 (280)
T cd05092         138 LASLHFVHRDLATRNCLVGQGL---VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVL  214 (280)
T ss_pred             HHHCCeecccccHhhEEEcCCC---CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHH
Confidence            3567999999999999998766   799999999986543221   2233456789999999988999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++ |.+||......+....+........    +..+++.+.+++.+||+.||.+||++++++.
T Consensus       215 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         215 WEIFTYGKQPWYQLSNTEAIECITQGRELER----PRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             HHHHcCCCCCCccCCHHHHHHHHHcCccCCC----CCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            99998 9999988777766666654433322    2356789999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.84  E-value=9.3e-21  Score=191.45  Aligned_cols=135  Identities=24%  Similarity=0.325  Sum_probs=106.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC---ccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA---DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~---~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++........   ....+++.|++||.+.+..++.++|||||||++
T Consensus       125 lH~~~iiH~dlkp~Nil~~~~~---~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l  201 (279)
T cd05109         125 LEEVRLVHRDLAARNVLVKSPN---HVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTV  201 (279)
T ss_pred             HHHCCeeccccccceEEEcCCC---cEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHH
Confidence            4667999999999999998766   6999999999876533221   122345679999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |||++ |..||...........+........    +...+.++.+++.+||..||.+||++.+++.
T Consensus       202 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         202 WELMTFGAKPYDGIPAREIPDLLEKGERLPQ----PPICTIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHCCCcCCC----CccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99998 9999987766555544433222222    2356789999999999999999999999973

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.84  E-value=4.9e-21  Score=194.64  Aligned_cols=143  Identities=24%  Similarity=0.463  Sum_probs=105.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+|+||||+|||++.++   .+||+|||+++..... .......+++.|+|||.+.+ ..++.++|+|||||++|
T Consensus       119 lH~~~i~H~dlkp~Nil~~~~~---~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~  195 (291)
T cd07870         119 IHGQHILHRDLKPQNLLISYLG---ELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFI  195 (291)
T ss_pred             HHhCCcccCCCChHHEEEcCCC---cEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHH
Confidence            4667999999999999998776   6999999999764322 22334567889999999865 35788899999999999


Q ss_pred             HHHhCCCCCCCCcHH-HHHHHHHhccCC-------------C-----C----CCC---ccc--ccCHHHHHHHHHhhccC
Q 008370           79 QLVTGKPPFDGSNQL-QLFQNILTSTEL-------------R-----F----PPG---AIE--ELHPDCVDLCRCLLRQN  130 (568)
Q Consensus        79 ELltG~~PF~g~~~~-~~~~~Il~~~~~-------------~-----~----p~~---~~~--~ls~~~~dLI~~cL~~d  130 (568)
                      +|++|..||.+.... +.+..+......             .     +    +..   .+.  ...+.+.+++.+||..|
T Consensus       196 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~d  275 (291)
T cd07870         196 EMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMF  275 (291)
T ss_pred             HHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcC
Confidence            999999999865432 222222110000             0     0    000   000  12568899999999999


Q ss_pred             CCCCCCHHHHHhchhH
Q 008370          131 PVERITFKEFFNHRFL  146 (568)
Q Consensus       131 P~~RpTaeElL~Hpff  146 (568)
                      |.+|||+++++.||||
T Consensus       276 p~~R~t~~~~l~h~~~  291 (291)
T cd07870         276 PKDRISAQDALLHPYF  291 (291)
T ss_pred             cccCcCHHHHhcCCCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.84  E-value=6.3e-21  Score=198.22  Aligned_cols=149  Identities=19%  Similarity=0.351  Sum_probs=108.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--------CccccCCCcccChhhhcc--CCCCcccch
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--------ADTLCGSPLYMAPEIIQN--HKYDAKADL   70 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--------~~t~~GT~~YmAPEvl~~--~~ys~ksDI   70 (568)
                      ||..+|+||||||+|||++.++   .+|++|||.+........        .....++..|++||++.+  ..++.++||
T Consensus       117 lH~~~ivHrDlkp~Nill~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di  193 (328)
T cd08226         117 LHQNGYIHRNIKASHILISGDG---LVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDI  193 (328)
T ss_pred             HHhCCeecCCCCHHHEEEeCCC---cEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhH
Confidence            3556999999999999999876   699999986543321110        111234567999999976  357889999


Q ss_pred             hhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCC------------------------------------------CC
Q 008370           71 WSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELR------------------------------------------FP  108 (568)
Q Consensus        71 WSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~------------------------------------------~p  108 (568)
                      ||+||++|+|++|+.||.+..........+......                                          ..
T Consensus       194 wslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (328)
T cd08226         194 YSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR  273 (328)
T ss_pred             HHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhcccccccccccccc
Confidence            999999999999999998766544443332211100                                          00


Q ss_pred             CCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370          109 PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus       109 ~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      .......+..+.+|+++||..||.+|||+.++++||||..+...
T Consensus       274 ~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~  317 (328)
T cd08226         274 TPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ  317 (328)
T ss_pred             chhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence            00112345678999999999999999999999999999888764

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.84  E-value=8e-21  Score=194.75  Aligned_cols=138  Identities=21%  Similarity=0.280  Sum_probs=105.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.+....   ......++..|+|||++....++.++|||||||++
T Consensus       154 lH~~~ivH~dlkp~Nill~~~~---~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l  230 (304)
T cd05096         154 LSSLNFVHRDLATRNCLVGENL---TIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTL  230 (304)
T ss_pred             HHHCCccccCcchhheEEcCCc---cEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHH
Confidence            3567999999999999999876   79999999998654332   12334567889999999888899999999999999


Q ss_pred             HHHHh--CCCCCCCCcHHHHHHHHHh---ccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           78 FQLVT--GKPPFDGSNQLQLFQNILT---STELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        78 ~ELlt--G~~PF~g~~~~~~~~~Il~---~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      |+|++  +..||.+....+.+..+..   ..........+..++..+.+|+.+||..+|.+|||++++.
T Consensus       231 ~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         231 WEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             HHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence            99986  6678887766555443321   1111111112235678899999999999999999999983

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.84  E-value=6.3e-21  Score=193.42  Aligned_cols=139  Identities=32%  Similarity=0.486  Sum_probs=109.4

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhC
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG   83 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG   83 (568)
                      .+|+||||||+||+++.++   .++|+|||++...... .....+|+..|+|||++.+..++.++|+|||||++|++++|
T Consensus       123 ~~i~H~dl~p~nil~~~~~---~~~l~d~gl~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg  198 (284)
T cd06620         123 HRIMHRDIKPSNILVNSRG---QIKLCDFGVSGELINS-IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALG  198 (284)
T ss_pred             cCeeccCCCHHHEEECCCC---cEEEccCCcccchhhh-ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhC
Confidence            4899999999999998776   7999999998754322 23456789999999999888899999999999999999999


Q ss_pred             CCCCCCCcHH-----------HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           84 KPPFDGSNQL-----------QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        84 ~~PF~g~~~~-----------~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +.||......           +.+..+.......++.   ..++..+.+|+.+||..||.+||+++|+++|+||...
T Consensus       199 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         199 KFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPS---SDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             CCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCc---hhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            9999865431           2223333222222221   2367889999999999999999999999999998543

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.84  E-value=7.1e-21  Score=193.59  Aligned_cols=146  Identities=24%  Similarity=0.416  Sum_probs=112.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..+|+|+||+|+||+++.++   .+||+|||++...... ......++..|++||.+.+..++.++|+|++||++|+|
T Consensus       121 lH~~~i~H~dl~~~nil~~~~~---~~~l~dfg~~~~~~~~-~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l  196 (287)
T cd06621         121 LHSRKIIHRDIKPSNILLTRKG---QVKLCDFGVSGELVNS-LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEV  196 (287)
T ss_pred             HHHCCcccCCCCHHHEEEecCC---eEEEeecccccccccc-ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHH
Confidence            3556999999999999998776   6999999998765432 22345678899999999988999999999999999999


Q ss_pred             HhCCCCCCCC-----cHHHHHHHHHhccCCCCCCCcc--cccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           81 VTGKPPFDGS-----NQLQLFQNILTSTELRFPPGAI--EELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        81 ltG~~PF~g~-----~~~~~~~~Il~~~~~~~p~~~~--~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|..||...     ...+....+.......++....  ...++.+.+|+.+||..+|.+|||+.|++.||||....
T Consensus       197 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~  273 (287)
T cd06621         197 AQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQM  273 (287)
T ss_pred             HhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccccccc
Confidence            9999999865     2234444343322222221111  23457899999999999999999999999999995543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.84  E-value=8.1e-21  Score=193.01  Aligned_cols=136  Identities=27%  Similarity=0.453  Sum_probs=109.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||.|||++.++   .+||+|||+++.+.....   .....++..|+|||++.+..++.++|||||||++
T Consensus       148 LH~~~ivH~dlkp~Nil~~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  224 (293)
T cd05053         148 LASKKCIHRDLAARNVLVTEDH---VMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLL  224 (293)
T ss_pred             HHHCCccccccceeeEEEcCCC---eEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHH
Confidence            3567999999999999998776   799999999987643321   1223345679999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++++ |..||.+....+.+..+........    +...+..+.+|+.+||..+|.+|||+.+++++
T Consensus       225 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         225 WEIFTLGGSPYPGIPVEELFKLLKEGYRMEK----PQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             HHHhcCCCCCCCCCCHHHHHHHHHcCCcCCC----CCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            99997 9999998877776665554432222    23567899999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.84  E-value=1.1e-20  Score=191.61  Aligned_cols=144  Identities=28%  Similarity=0.523  Sum_probs=115.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+|+||||+||+++.++   .+||+|||++....... ......+++.|++||++.+..++.++|+|||||++|+
T Consensus       132 lH~~gi~H~dl~p~ni~i~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~  208 (286)
T cd06614         132 LHSQNVIHRDIKSDNILLSKDG---SVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIE  208 (286)
T ss_pred             HHhCCeeeCCCChhhEEEcCCC---CEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHH
Confidence            4567999999999999999776   69999999986554321 2234467889999999988889999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++|+.||...+.......+........+  ....++..+.+++.+||..+|.+||++.+++.|+||...
T Consensus       209 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~  276 (286)
T cd06614         209 MAEGEPPYLREPPLRALFLITTKGIPPLK--NPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKA  276 (286)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHhcCCCCCc--chhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhcc
Confidence            99999999887766555554433222222  122367899999999999999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.84  E-value=1.4e-20  Score=190.78  Aligned_cols=135  Identities=24%  Similarity=0.332  Sum_probs=106.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      +|..+|+||||||+|||++.++   .+||+|||+++......   ......|+..|++||.+.+..++.++|||||||++
T Consensus       125 lH~~~iiH~dlkp~nili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il  201 (279)
T cd05111         125 LEEHRMVHRNLAARNILLKSDS---IVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTV  201 (279)
T ss_pred             HHHCCEeccccCcceEEEcCCC---cEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHH
Confidence            3567999999999999998766   79999999998764332   22344567789999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ||+++ |..||.+.........+........    +.....++.+++.+||..+|.+||++.|+++
T Consensus       202 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         202 WEMMSYGAEPYAGMRPHEVPDLLEKGERLAQ----PQICTIDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             HHHHcCCCCCCCCCCHHHHHHHHHCCCcCCC----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            99998 9999988776554443332222221    1235678899999999999999999999865

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.84  E-value=8.6e-21  Score=191.06  Aligned_cols=135  Identities=27%  Similarity=0.404  Sum_probs=105.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.............+..|+|||++....++.++|+|||||++|+|
T Consensus       128 lH~~~i~H~dikp~nili~~~~---~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el  204 (270)
T cd05047         128 LSQKQFIHRDLAARNILVGENY---VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI  204 (270)
T ss_pred             HHHCCEeecccccceEEEcCCC---eEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHH
Confidence            3567999999999999998876   7999999998643221111122345679999999888899999999999999999


Q ss_pred             Hh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           81 VT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        81 lt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ++ |..||.+.+..+.+..+.......    .+..++.++.+++.+||..+|.+||++.+++.
T Consensus       205 ~~~g~~pf~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         205 VSLGGTPYCGMTCAELYEKLPQGYRLE----KPLNCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             HcCCCCCccccCHHHHHHHHhCCCCCC----CCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            97 999998877766666554332222    22356788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.84  E-value=9.9e-21  Score=190.28  Aligned_cols=135  Identities=26%  Similarity=0.480  Sum_probs=110.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.+....   ......++..|+|||.+....++.++|+|||||++
T Consensus       135 lH~~~i~H~di~p~nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  211 (277)
T cd05032         135 LAAKKFVHRDLAARNCMVAEDL---TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVL  211 (277)
T ss_pred             HHhCCccccccChheEEEcCCC---CEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHH
Confidence            3567999999999999999877   69999999998654332   22344567889999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |++++ |..||.+.+..+....+........|    ...+..+.+++.+||+.+|.+|||+.+++.
T Consensus       212 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         212 WEMATLAEQPYQGLSNEEVLKFVIDGGHLDLP----ENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             HHhhccCCCCCccCCHHHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            99998 99999888877776666543333333    345789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.83  E-value=1.3e-20  Score=188.79  Aligned_cols=135  Identities=21%  Similarity=0.339  Sum_probs=108.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC----CccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL----ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~----~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.......    .....+++.|+|||.+....++.++|+|||||+
T Consensus       111 lH~~~i~H~dlkp~nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  187 (257)
T cd05115         111 LEGKNFVHRDLAARNVLLVNQH---YAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGIT  187 (257)
T ss_pred             HHhcCeeecccchheEEEcCCC---cEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHH
Confidence            4667999999999999998776   799999999976543221    111223567999999988889999999999999


Q ss_pred             HHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           77 LFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        77 L~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|++++ |..||.+....+....+........+    ...++++.+++.+||..+|++||++.++.+
T Consensus       188 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         188 MWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCP----AECPPEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             HHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            999996 99999988777766656554333333    356789999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.83  E-value=9.7e-21  Score=188.83  Aligned_cols=136  Identities=24%  Similarity=0.414  Sum_probs=107.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhccCCCCcccchhhHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA   75 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGv   75 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.+....     ......+++.|+|||.+....++.++|||||||
T Consensus       114 lH~~~i~H~dlk~~nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  190 (262)
T cd05058         114 LASKKFVHRDLAARNCMLDESF---TVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGV  190 (262)
T ss_pred             HHhCCccccccCcceEEEcCCC---cEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHH
Confidence            3567999999999999998876   69999999998654321     112334567899999998888999999999999


Q ss_pred             HHHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           76 ILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        76 iL~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ++|||++ |.+||...+..+....+........+    ...+..+.+++.+||..+|++||++.++++.
T Consensus       191 ~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~  255 (262)
T cd05058         191 LLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQP----EYCPDPLYEVMLSCWHPKPEMRPTFSELVSR  255 (262)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCC----CcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            9999999 56778777766666555443322222    3457889999999999999999999999654

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.83  E-value=7.2e-21  Score=187.10  Aligned_cols=140  Identities=31%  Similarity=0.571  Sum_probs=113.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+++|+||+|+||+++.++   .+||+|||.+........   .....++..|++||.+....++.++|+|+||+++
T Consensus       117 lh~~~~~h~dl~p~ni~i~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il  193 (260)
T cd06606         117 LHSNGIVHRDIKGANILVDSDG---VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTV  193 (260)
T ss_pred             HHHCCccccCCCHHHEEEcCCC---CEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHH
Confidence            3557999999999999999866   699999999987765442   4456788999999999888899999999999999


Q ss_pred             HHHHhCCCCCCCCc-HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           78 FQLVTGKPPFDGSN-QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        78 ~ELltG~~PF~g~~-~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |+|++|..||.... .......+..   ....+..+...+..+.+++.+||..+|.+||++.++++||||
T Consensus       194 ~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         194 IEMATGKPPWSELGNPMAALYKIGS---SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             HHHHhCCCCCCCCCchHHHHHhccc---cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            99999999998765 2222222321   111222334568899999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.83  E-value=6e-21  Score=192.75  Aligned_cols=142  Identities=29%  Similarity=0.558  Sum_probs=109.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||+|+||+++.++   .+||+|||+++..... .......|+..|+|||++.+ ..++.++|||||||++|+
T Consensus       117 H~~~i~h~~l~p~ni~~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~e  193 (286)
T cd07846         117 HSHNIIHRDIKPENILVSQSG---VVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTE  193 (286)
T ss_pred             HHCCccccCCCHHHEEECCCC---cEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHH
Confidence            456999999999999998876   7999999999875433 23344568889999999865 457788999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccC------------------CCCCC--------CcccccCHHHHHHHHHhhccCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTE------------------LRFPP--------GAIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~------------------~~~p~--------~~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      |++|++||.+....+....+.....                  ...+.        .....++..+.+|+.+||..+|.+
T Consensus       194 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  273 (286)
T cd07846         194 MLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDD  273 (286)
T ss_pred             HHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCccc
Confidence            9999999987765554444332100                  00010        012345788999999999999999


Q ss_pred             CCCHHHHHhchhH
Q 008370          134 RITFKEFFNHRFL  146 (568)
Q Consensus       134 RpTaeElL~Hpff  146 (568)
                      ||++.++++||||
T Consensus       274 Rp~~~~il~~~~~  286 (286)
T cd07846         274 RPSSSQLLHHEFF  286 (286)
T ss_pred             chhHHHHhcCCCC
Confidence            9999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.83  E-value=6.1e-21  Score=213.86  Aligned_cols=146  Identities=21%  Similarity=0.272  Sum_probs=101.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC--CCCccccCCCcccChhhhccC----------------
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ--DLADTLCGSPLYMAPEIIQNH----------------   62 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~--~~~~t~~GT~~YmAPEvl~~~----------------   62 (568)
                      ||..+||||||||+|||++.+.  ..+||+|||+|+.+...  ......+|++.|||||.+...                
T Consensus       271 LH~~gIiHRDLKP~NILl~~~~--~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~s  348 (566)
T PLN03225        271 LHSTGIVHRDVKPQNIIFSEGS--GSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALS  348 (566)
T ss_pred             HHHCCEEeCcCCHHHEEEeCCC--CcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCcccccccccc
Confidence            4567999999999999998643  26999999999865432  234567899999999976422                


Q ss_pred             ------CCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCC-----------CCCCC------cccccCHHH
Q 008370           63 ------KYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTEL-----------RFPPG------AIEELHPDC  119 (568)
Q Consensus        63 ------~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~-----------~~p~~------~~~~ls~~~  119 (568)
                            .++.++||||+||++|||+++..++..  ....+..++.....           ...+.      .........
T Consensus       349 p~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~  426 (566)
T PLN03225        349 PVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAG  426 (566)
T ss_pred             chhccccCCCCcccHHHHHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHH
Confidence                  234567999999999999987666532  22222222211110           00000      011123456


Q ss_pred             HHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370          120 VDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus       120 ~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++||.+||..||.+|||+.++++||||....
T Consensus       427 ~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~  457 (566)
T PLN03225        427 WELLKSMMRFKGRQRISAKAALAHPYFDREG  457 (566)
T ss_pred             HHHHHHHccCCcccCCCHHHHhCCcCcCCCC
Confidence            7999999999999999999999999996643

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.83  E-value=7.8e-22  Score=209.21  Aligned_cols=141  Identities=30%  Similarity=0.452  Sum_probs=111.7

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHh
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT   82 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELlt   82 (568)
                      ..||+|.||||+|||++.+.+  ++||||||.|.....+..+. +.-+..|.|||++.+.+|+...|+||+||+||||.|
T Consensus       554 ~c~vlHaDIKPDNiLVNE~k~--iLKLCDfGSA~~~~eneitP-YLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYt  630 (752)
T KOG0670|consen  554 KCGVLHADIKPDNILVNESKN--ILKLCDFGSASFASENEITP-YLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYT  630 (752)
T ss_pred             hcCeeecccCccceEeccCcc--eeeeccCccccccccccccH-HHHHHhccCcceeecCcccCCccceeeceeeEEeec
Confidence            458999999999999998765  89999999998776655432 334567999999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHhccCCCCCCC----------------------------------------------------
Q 008370           83 GKPPFDGSNQLQLFQNILTSTELRFPPG----------------------------------------------------  110 (568)
Q Consensus        83 G~~PF~g~~~~~~~~~Il~~~~~~~p~~----------------------------------------------------  110 (568)
                      |+..|+|....+++...+.. .-.||..                                                    
T Consensus       631 GkIlFpG~TNN~MLrl~me~-KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q  709 (752)
T KOG0670|consen  631 GKILFPGRTNNQMLRLFMEL-KGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQ  709 (752)
T ss_pred             cceecCCCCcHHHHHHHHHh-cCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccC
Confidence            99999998877766544321 1111100                                                    


Q ss_pred             ----cccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370          111 ----AIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus       111 ----~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                          ....+-..+.+|+.+||..||++|+|..++|.||||.
T Consensus       710 ~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~  750 (752)
T KOG0670|consen  710 RLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFIT  750 (752)
T ss_pred             CCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCccc
Confidence                0001124688999999999999999999999999995

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.83  E-value=1e-20  Score=190.81  Aligned_cols=142  Identities=31%  Similarity=0.520  Sum_probs=110.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc-cCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ-NHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~-~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..+|+|+||||+||+++.++   .+||+|||+++............|+..|+|||++. ...++.++|+||||+++|+|
T Consensus       116 h~~~i~H~dl~~~ni~i~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el  192 (283)
T cd07830         116 HKHGFFHRDLKPENLLVSGPE---VVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAEL  192 (283)
T ss_pred             HHCCcccCCCChhhEEEcCCC---CEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHH
Confidence            456899999999999999876   69999999998766544445567889999999875 44578899999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCC------------------CCCC-------CcccccCHHHHHHHHHhhccCCCCCC
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTEL------------------RFPP-------GAIEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~------------------~~p~-------~~~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      ++|++||.+....+.+.++......                  .++.       ......+.++.+++++||..+|.+||
T Consensus       193 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp  272 (283)
T cd07830         193 YTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRP  272 (283)
T ss_pred             HhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCC
Confidence            9999999887665554443321100                  0000       00112357899999999999999999


Q ss_pred             CHHHHHhchhH
Q 008370          136 TFKEFFNHRFL  146 (568)
Q Consensus       136 TaeElL~Hpff  146 (568)
                      +++|++.||||
T Consensus       273 t~~ei~~~~~~  283 (283)
T cd07830         273 TASQALQHPYF  283 (283)
T ss_pred             CHHHHhhCCCC
Confidence            99999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.83  E-value=7.3e-21  Score=193.16  Aligned_cols=143  Identities=27%  Similarity=0.472  Sum_probs=105.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhcc-CCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++...... ......++..|+|||++.+ ..++.++||||+||++|
T Consensus       119 lH~~~i~H~dl~p~nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~  195 (291)
T cd07844         119 CHQRRVLHRDLKPQNLLISERG---ELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFY  195 (291)
T ss_pred             HHhCCeecccCCHHHEEEcCCC---CEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHH
Confidence            3567999999999999998877   69999999987643221 2223456888999999865 45788999999999999


Q ss_pred             HHHhCCCCCCCCc-HHHHHHHHHhccCC------------------CCC----C---CcccccC--HHHHHHHHHhhccC
Q 008370           79 QLVTGKPPFDGSN-QLQLFQNILTSTEL------------------RFP----P---GAIEELH--PDCVDLCRCLLRQN  130 (568)
Q Consensus        79 ELltG~~PF~g~~-~~~~~~~Il~~~~~------------------~~p----~---~~~~~ls--~~~~dLI~~cL~~d  130 (568)
                      +|++|+.||.+.. ..+.+..+......                  .++    .   .....+.  .++.+++.+||..+
T Consensus       196 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~  275 (291)
T cd07844         196 EMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYE  275 (291)
T ss_pred             HHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccC
Confidence            9999999997665 22322222211000                  000    0   0001233  78899999999999


Q ss_pred             CCCCCCHHHHHhchhH
Q 008370          131 PVERITFKEFFNHRFL  146 (568)
Q Consensus       131 P~~RpTaeElL~Hpff  146 (568)
                      |.+||++.+++.||||
T Consensus       276 p~~Rps~~e~l~~~~f  291 (291)
T cd07844         276 PKKRISAAEAMKHPYF  291 (291)
T ss_pred             cccccCHHHHhcCCCC
Confidence            9999999999999997

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.83  E-value=1.5e-20  Score=187.34  Aligned_cols=135  Identities=25%  Similarity=0.420  Sum_probs=109.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC--ccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~--~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++........  ....++..|+|||++.+..++.++|+||||+++|
T Consensus       116 lH~~~i~H~dl~p~ni~i~~~~---~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~  192 (256)
T cd05114         116 LERNSFIHRDLAARNCLVSSTG---VVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMW  192 (256)
T ss_pred             HHHCCccccccCcceEEEcCCC---eEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHH
Confidence            3567999999999999998776   7999999999865433221  1223456799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|++ |+.||...+..+....+........|    ...+..+.+++.+||..+|.+||+++++++
T Consensus       193 el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         193 EVFTEGKMPFEKKSNYEVVEMISRGFRLYRP----KLASMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC----CCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            9999 99999988887777777654332222    245678999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.83  E-value=1.4e-20  Score=185.79  Aligned_cols=137  Identities=34%  Similarity=0.722  Sum_probs=114.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..+|+|+||||.||+++.++   .+||+|||++...... .......|+..|++||.+.+..++.++|+|+||+++|++
T Consensus       110 h~~~~~H~~l~p~ni~~~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l  186 (250)
T cd05123         110 HSLGIIYRDLKPENILLDADG---HIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEM  186 (250)
T ss_pred             HHCCceecCCCcceEEEcCCC---cEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHH
Confidence            456899999999999999876   6999999999876543 234456788899999999888888999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH---HHHHhchhH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF---KEFFNHRFL  146 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa---eElL~Hpff  146 (568)
                      ++|..||...+.......+.. ....++    ..++..+.+++++||..||.+||++   +++++||||
T Consensus       187 ~~g~~p~~~~~~~~~~~~~~~-~~~~~~----~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         187 LTGKPPFYAEDRKEIYEKILK-DPLRFP----EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             HHCCCCCCCCCHHHHHHHHhc-CCCCCC----CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            999999988776666665554 233333    3557899999999999999999999   999999997

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.83  E-value=1.3e-20  Score=194.09  Aligned_cols=140  Identities=28%  Similarity=0.471  Sum_probs=112.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc---cCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~---~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+||+++.++   .+||+|||++......   ....|++.|+|||.+.   ...++.++|||||||++
T Consensus       131 LH~~~i~H~dl~p~nil~~~~~---~~kl~dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il  204 (308)
T cd06634         131 LHSHNMIHRDVKAGNILLSEPG---LVKLGDFGSASIMAPA---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC  204 (308)
T ss_pred             HHhCCcccCCCCHHhEEECCCC---cEEECCcccceeecCc---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHH
Confidence            3556999999999999998776   7999999998765432   3456888999999974   34578899999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |+|++|..||...+.......+........   .....+..+.+||.+||..+|.+||++++++.|+|+...
T Consensus       205 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         205 IELAERKPPLFNMNAMSALYHIAQNESPAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             HHHHcCCCCCccccHHHHHHHHhhcCCCCc---CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcccccc
Confidence            999999999987766555554544322222   223567889999999999999999999999999998654

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.83  E-value=1.7e-20  Score=187.20  Aligned_cols=135  Identities=26%  Similarity=0.427  Sum_probs=108.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.......  .....++..|+|||.+....++.++|+|||||++|
T Consensus       119 LH~~~i~H~dl~p~nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  195 (261)
T cd05072         119 IERKNYIHRDLRAANVLVSESL---MCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLY  195 (261)
T ss_pred             HHHCCeeccccchhhEEecCCC---cEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHH
Confidence            3567999999999999999876   799999999987653321  12234566799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|++ |..||.+....+....+......  +  ....++.++.+++.+||..+|++||+++++.+
T Consensus       196 ~l~t~g~~p~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         196 EIVTYGKIPYPGMSNSDVMSALQRGYRM--P--RMENCPDELYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             HHHccCCCCCCCCCHHHHHHHHHcCCCC--C--CCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            9998 99999988777666665543222  2  22356789999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.83  E-value=9e-21  Score=194.95  Aligned_cols=136  Identities=26%  Similarity=0.398  Sum_probs=106.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++............++..|+|||++.+..++.++|||||||++|+|
T Consensus       140 LH~~gi~H~dlkp~Nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  216 (303)
T cd05088         140 LSQKQFIHRDLAARNILVGENY---VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEI  216 (303)
T ss_pred             HHhCCccccccchheEEecCCC---cEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHH
Confidence            4667999999999999998776   6999999998643221111122345679999999888899999999999999999


Q ss_pred             Hh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           81 VT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        81 lt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ++ |..||.+.+..+....+......    ..+...++.+.+|+.+||+.+|.+||++++++.+
T Consensus       217 lt~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         217 VSLGGTPYCGMTCAELYEKLPQGYRL----EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             HhcCCCCcccCChHHHHHHHhcCCcC----CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            98 99999887776666555332111    1223567899999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.83  E-value=3.4e-21  Score=215.25  Aligned_cols=130  Identities=28%  Similarity=0.467  Sum_probs=114.3

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccC---CCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCG---SPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~G---T~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      .++|||||..+|+||..+-   +|||+|||++|.....+.++....   ...||+||.+.+.+|++++|||||||+|||+
T Consensus       622 ~~FVHRDLATRNCLVge~l---~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEI  698 (774)
T KOG1026|consen  622 HHFVHRDLATRNCLVGENL---VVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEI  698 (774)
T ss_pred             Ccccccchhhhhceeccce---EEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhh
Confidence            4899999999999999876   899999999998876665554322   3469999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHH
Q 008370           81 VT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF  140 (568)
Q Consensus        81 lt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeEl  140 (568)
                      ++ |+.||.|..+.+.++.|..+..+.-    ++..+..+.+||..||+.+|++||++.||
T Consensus       699 FsyG~QPy~glSn~EVIe~i~~g~lL~~----Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI  755 (774)
T KOG1026|consen  699 FSYGKQPYYGLSNQEVIECIRAGQLLSC----PENCPTEVYSLMLECWNENPKRRPSFKEI  755 (774)
T ss_pred             hccccCcccccchHHHHHHHHcCCcccC----CCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence            99 9999999999999998887755443    35778999999999999999999999997

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.83  E-value=1.7e-20  Score=199.65  Aligned_cols=137  Identities=25%  Similarity=0.392  Sum_probs=106.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.......   .....++..|+|||++.+..++.++|||||||++
T Consensus       230 lH~~~ivH~Dlkp~Nill~~~~---~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l  306 (375)
T cd05104         230 LASKNCIHRDLAARNILLTHGR---ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL  306 (375)
T ss_pred             HHHCCeeccCCchhhEEEECCC---cEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHH
Confidence            3567999999999999998766   799999999987643321   1223445679999999998999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+|++ |..||.+......+.+.+......   ..+...+.++.+|+.+||..||.+||++.++++.
T Consensus       307 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         307 WEIFSLGSSPYPGMPVDSKFYKMIKEGYRM---LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             HHHHhcCCCCCCCCCchHHHHHHHHhCccC---CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            99998 899998765444444444332211   1123457889999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.83  E-value=1.3e-20  Score=197.77  Aligned_cols=144  Identities=29%  Similarity=0.452  Sum_probs=111.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++....  ......|++.|+|||++.+ ..++.++|+||+||++|+
T Consensus       136 LH~~~ivH~dlkp~NIll~~~~---~~kl~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~e  210 (345)
T cd07877         136 IHSADIIHRDLKPSNLAVNEDC---ELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  210 (345)
T ss_pred             HHHCCeeecCCChHHEEEcCCC---CEEEecccccccccc--cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHH
Confidence            3567999999999999999876   699999999876432  2234578899999999866 568889999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCC----------------------CCCC----CcccccCHHHHHHHHHhhccCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTEL----------------------RFPP----GAIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~----------------------~~p~----~~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      |++|+.||.+.+....+..+......                      ..+.    ......++.+.+||.+||+.||.+
T Consensus       211 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~  290 (345)
T cd07877         211 LLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK  290 (345)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhh
Confidence            99999999877655544433221100                      0010    011234678999999999999999


Q ss_pred             CCCHHHHHhchhHHHh
Q 008370          134 RITFKEFFNHRFLGEL  149 (568)
Q Consensus       134 RpTaeElL~Hpff~~~  149 (568)
                      ||++.+++.||||...
T Consensus       291 R~t~~e~l~h~~f~~~  306 (345)
T cd07877         291 RITAAQALAHAYFAQY  306 (345)
T ss_pred             cCCHHHHhcChhhhhc
Confidence            9999999999999764

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.83  E-value=7.7e-21  Score=191.78  Aligned_cols=142  Identities=28%  Similarity=0.467  Sum_probs=109.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+||+++.++   .+||+|||+++...... ......+++.|++||.+.+ ..++.++|+|++||++|+
T Consensus       117 H~~~i~h~dl~p~ni~~~~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~  193 (284)
T cd07836         117 HENRVLHRDLKPQNLLINKRG---ELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAE  193 (284)
T ss_pred             HHCCeeeCCCCHHHEEECCCC---cEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHH
Confidence            557999999999999998776   69999999997654321 2234567889999998865 456889999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCC-----------------CCCC-------CcccccCHHHHHHHHHhhccCCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTEL-----------------RFPP-------GAIEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~-----------------~~p~-------~~~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      |++|+.||.+.+..+.+..+......                 .++.       ......+..+.+++.+||+.||.+||
T Consensus       194 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~  273 (284)
T cd07836         194 MITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRI  273 (284)
T ss_pred             HHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCC
Confidence            99999999987766555544322100                 0000       00123467889999999999999999


Q ss_pred             CHHHHHhchhH
Q 008370          136 TFKEFFNHRFL  146 (568)
Q Consensus       136 TaeElL~Hpff  146 (568)
                      ++.++++||||
T Consensus       274 ~~~~~l~~~~f  284 (284)
T cd07836         274 SAHDALQHPWF  284 (284)
T ss_pred             CHHHHhcCCCC
Confidence            99999999997

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.83  E-value=2.2e-20  Score=193.22  Aligned_cols=140  Identities=28%  Similarity=0.467  Sum_probs=113.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc---cCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~---~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||+|+||+++.++   .+||+|||++.....   .....|++.|+|||++.   ...++.++|+|||||++
T Consensus       141 lH~~~i~H~dL~p~Nil~~~~~---~~kl~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil  214 (317)
T cd06635         141 LHSHNMIHRDIKAGNILLTEPG---QVKLADFGSASIASP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC  214 (317)
T ss_pred             HHHCCcccCCCCcccEEECCCC---CEEEecCCCccccCC---cccccCCccccChhhhhcCCCCCCCccccHHHHHHHH
Confidence            3567999999999999998766   799999999875432   23457889999999974   45688899999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |+|++|+.||...........+........+   ....++.+.+++.+||+.+|.+||++.++++|+|+...
T Consensus       215 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~  283 (317)
T cd06635         215 IELAERKPPLFNMNAMSALYHIAQNESPTLQ---SNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE  283 (317)
T ss_pred             HHHHhCCCCCCCccHHHHHHHHHhccCCCCC---CccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence            9999999999887766666666554332222   23567789999999999999999999999999998543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.83  E-value=1.1e-20  Score=185.92  Aligned_cols=144  Identities=24%  Similarity=0.435  Sum_probs=112.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhcc-CCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGv   75 (568)
                      |+..|+|||+|+.|+||+.++   ++||+|||+++.+...+     .+...+-|.+|.+||.+.+ ..|+++.|+|..||
T Consensus       141 Hr~kilHRDmKaaNvLIt~dg---ilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgC  217 (376)
T KOG0669|consen  141 HRNKILHRDMKAANVLITKDG---ILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGC  217 (376)
T ss_pred             HHhhHHhhcccHhhEEEcCCc---eEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHH
Confidence            566899999999999999988   89999999998765322     2334556899999998865 57999999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhc---cCC------------------CCCCCccc---------ccCHHHHHHHHH
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTS---TEL------------------RFPPGAIE---------ELHPDCVDLCRC  125 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~---~~~------------------~~p~~~~~---------~ls~~~~dLI~~  125 (568)
                      ++.||++|.+-|.+....+.+..|..-   ...                  +.|.....         ...+++.+|+.+
T Consensus       218 imaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~  297 (376)
T KOG0669|consen  218 IMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEK  297 (376)
T ss_pred             HHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHH
Confidence            999999999999998887776655321   000                  01111111         113478899999


Q ss_pred             hhccCCCCCCCHHHHHhchhHHH
Q 008370          126 LLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus       126 cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      +|..||.+|++++++++|.||-.
T Consensus       298 ll~~DP~kR~~ad~alnh~~F~k  320 (376)
T KOG0669|consen  298 LLKLDPTKRIDADQALNHDFFWK  320 (376)
T ss_pred             HhccCcccCcchHhhhchhhhhc
Confidence            99999999999999999999943

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.83  E-value=9.4e-21  Score=216.94  Aligned_cols=140  Identities=29%  Similarity=0.536  Sum_probs=111.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-------------------CCCCCccccCCCcccChhhhcc
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-------------------PQDLADTLCGSPLYMAPEIIQN   61 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-------------------~~~~~~t~~GT~~YmAPEvl~~   61 (568)
                      ||..|||||||||.||+++.++   .|||+|||+|+...                   ........+||..|+|||++.+
T Consensus       713 IH~~giIHRDLKP~NIFLd~~~---~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~  789 (1351)
T KOG1035|consen  713 IHDQGIIHRDLKPRNIFLDSRN---SVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD  789 (1351)
T ss_pred             HHhCceeeccCCcceeEEcCCC---CeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence            4667999999999999999877   69999999998621                   0112345789999999999976


Q ss_pred             C---CCCcccchhhHHHHHHHHHhCCCCCCCCc-HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH
Q 008370           62 H---KYDAKADLWSVGAILFQLVTGKPPFDGSN-QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF  137 (568)
Q Consensus        62 ~---~ys~ksDIWSlGviL~ELltG~~PF~g~~-~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa  137 (568)
                      .   .|+.|+|+||+||++|||+.   ||...- ...++.++. .+..++++..+....+.-..+|++||+.||.+|||+
T Consensus       790 ~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR-~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA  865 (1351)
T KOG1035|consen  790 TSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLR-KGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTA  865 (1351)
T ss_pred             cccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcc-cCCCCCCcccccccchHHHHHHHHHhcCCCccCCCH
Confidence            5   49999999999999999985   575433 334444444 445555655566667788899999999999999999


Q ss_pred             HHHHhchhHH
Q 008370          138 KEFFNHRFLG  147 (568)
Q Consensus       138 eElL~Hpff~  147 (568)
                      .|+|++.||-
T Consensus       866 ~eLL~s~llp  875 (1351)
T KOG1035|consen  866 TELLNSELLP  875 (1351)
T ss_pred             HHHhhccCCC
Confidence            9999998886

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.83  E-value=1.7e-20  Score=190.79  Aligned_cols=135  Identities=27%  Similarity=0.444  Sum_probs=108.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.......   .....++..|+|||.+.+..++.++||||||+++
T Consensus       143 LH~~~ivH~dikp~nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l  219 (290)
T cd05045         143 LAEMKLVHRDLAARNVLVAEGR---KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL  219 (290)
T ss_pred             HHHCCeehhhhhhheEEEcCCC---cEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHH
Confidence            3567999999999999998776   799999999986533221   1223456789999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++ |..||.+....+....+.......    .+...+.++.+++.+||+.+|.+||++.++++
T Consensus       220 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         220 WEIVTLGGNPYPGIAPERLFNLLKTGYRME----RPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHhCCCCCC----CCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            99998 999999887776665544332222    23467789999999999999999999999854

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.83  E-value=1.7e-20  Score=193.94  Aligned_cols=140  Identities=29%  Similarity=0.481  Sum_probs=112.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc---cCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~---~~~ys~ksDIWSlGviL   77 (568)
                      ||..||+||||||+||+++.++   .+||+|||++.....   .....|+..|+|||++.   ...++.++|+|||||++
T Consensus       137 LH~~gi~H~dl~p~nili~~~~---~~kL~dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil  210 (313)
T cd06633         137 LHSHNMIHRDIKAGNILLTEPG---QVKLADFGSASKSSP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC  210 (313)
T ss_pred             HHHCCeecCCCChhhEEECCCC---CEEEeecCCCcccCC---CCCccccccccChhhccccCCCCCCchhhHHHHHHHH
Confidence            3557999999999999998776   699999999865322   33567899999999984   35678899999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |+|++|..||...+.......+.....   +.......+..+.+|+.+||+.+|.+||++.+++.||||...
T Consensus       211 ~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~  279 (313)
T cd06633         211 IELAERKPPLFNMNAMSALYHIAQNDS---PTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD  279 (313)
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHhcCC---CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence            999999999988776666555543322   222223456789999999999999999999999999999654

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.83  E-value=2.2e-20  Score=191.49  Aligned_cols=135  Identities=27%  Similarity=0.428  Sum_probs=110.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.+.....   .....+++.|+|||++.+..++.++|||||||++|
T Consensus       154 H~~givH~dlkp~Nili~~~~---~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  230 (304)
T cd05101         154 ASQKCIHRDLAARNVLVTENN---VMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW  230 (304)
T ss_pred             HHCCeeecccccceEEEcCCC---cEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHH
Confidence            566999999999999998776   799999999987643221   22334567899999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+....+....+........    +...+..+.+|+.+||..+|.+||++.++++.
T Consensus       231 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         231 EIFTLGGSPYPGIPVEELFKLLKEGHRMDK----PANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             HHHcCCCCCcccCCHHHHHHHHHcCCcCCC----CCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            9998 8899998887777766654432222    23668899999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.83  E-value=9.5e-21  Score=197.08  Aligned_cols=146  Identities=29%  Similarity=0.527  Sum_probs=111.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---------------CCCccccCCCcccChhhhccC-CC
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---------------DLADTLCGSPLYMAPEIIQNH-KY   64 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---------------~~~~t~~GT~~YmAPEvl~~~-~y   64 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++.....               .......+++.|+|||.+.+. .+
T Consensus       135 LH~~~i~H~dl~~~nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  211 (335)
T PTZ00024        135 LHKWYFMHRDLSPANIFINSKG---ICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKY  211 (335)
T ss_pred             HHhCCeecccccHHHeEECCCC---CEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCC
Confidence            3567999999999999998876   7999999999865411               111233567889999998654 46


Q ss_pred             CcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCC----CC----------------C---CcccccCHHHHH
Q 008370           65 DAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELR----FP----------------P---GAIEELHPDCVD  121 (568)
Q Consensus        65 s~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~----~p----------------~---~~~~~ls~~~~d  121 (568)
                      +.++|+||+||++|+|++|.+||.+.+..+.+..+.......    ++                .   ......+..+.+
T Consensus       212 ~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (335)
T PTZ00024        212 HFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAID  291 (335)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHH
Confidence            889999999999999999999999888776665554321100    00                0   011234678899


Q ss_pred             HHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370          122 LCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       122 LI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++++||..+|++||++++++.||||+..
T Consensus       292 li~~~l~~~P~~R~s~~~~l~~~~~~~~  319 (335)
T PTZ00024        292 LLQSLLKLNPLERISAKEALKHEYFKSD  319 (335)
T ss_pred             HHHHHcCCCchhccCHHHHhcCcccCCC
Confidence            9999999999999999999999999644

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.83  E-value=2.9e-20  Score=185.77  Aligned_cols=135  Identities=24%  Similarity=0.372  Sum_probs=107.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCc--cccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD--TLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~--t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      +|..||+||||||+||+++.++   .+||+|||+++.........  ...++..|+|||++.+..++.++|+||||+++|
T Consensus       119 lH~~~i~H~dl~p~Nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  195 (261)
T cd05068         119 LEAQNYIHRDLAARNVLVGENN---ICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLT  195 (261)
T ss_pred             HHhCCeeeccCCcceEEEcCCC---CEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHH
Confidence            3567999999999999999876   69999999998765322111  112234799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|++ |+.||.+.........+.......    .....+..+.+++.+||..+|.+||++.++..
T Consensus       196 el~t~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         196 EIVTYGRMPYPGMTNAEVLQQVDQGYRMP----CPPGCPKELYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHcCCCCC----CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            9999 999999888777776665432222    22356789999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.83  E-value=1.4e-20  Score=191.86  Aligned_cols=143  Identities=25%  Similarity=0.423  Sum_probs=109.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhcc-CCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL   77 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++......  ......++..|++||.+.+ ..++.++||||+||++
T Consensus       132 LH~~~i~H~dl~p~nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~  208 (302)
T cd07864         132 CHKKNFLHRDIKCSNILLNNKG---QIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCIL  208 (302)
T ss_pred             HHhCCeecCCCCHHHEEECCCC---cEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHH
Confidence            3567999999999999998876   79999999998764332  2223456778999998864 4578899999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCC----CCC---------------------CcccccCHHHHHHHHHhhccCCC
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELR----FPP---------------------GAIEELHPDCVDLCRCLLRQNPV  132 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~----~p~---------------------~~~~~ls~~~~dLI~~cL~~dP~  132 (568)
                      |+|++|++||...+..+.+..+.......    +|.                     .....++..+.+++.+||..+|.
T Consensus       209 ~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~  288 (302)
T cd07864         209 GELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPS  288 (302)
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChh
Confidence            99999999998777665554443321100    000                     01124578899999999999999


Q ss_pred             CCCCHHHHHhchhH
Q 008370          133 ERITFKEFFNHRFL  146 (568)
Q Consensus       133 ~RpTaeElL~Hpff  146 (568)
                      +||++++++.||||
T Consensus       289 ~Rp~~~~il~~~~~  302 (302)
T cd07864         289 KRCTAEEALNSPWL  302 (302)
T ss_pred             hCCCHHHHhcCCCC
Confidence            99999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.83  E-value=1.4e-20  Score=177.56  Aligned_cols=135  Identities=23%  Similarity=0.371  Sum_probs=102.8

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCC
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK   84 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~   84 (568)
                      .++|..-||+|||++.++   .+|+  ||+++.....    ...||+.|||||++.+..|+.++|||||||++|||++|+
T Consensus        31 ~~lH~~~kp~Nil~~~~~---~~~~--fG~~~~~~~~----~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~  101 (176)
T smart00750       31 RELHRQAKSGNILLTWDG---LLKL--DGSVAFKTPE----QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYE  101 (176)
T ss_pred             HHHHhcCCcccEeEcCcc---ceee--ccceEeeccc----cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCC
Confidence            456777799999998876   6888  9999876442    236899999999999999999999999999999999999


Q ss_pred             CCCCCCcHH-HHHHHHHhccCCCCCC--CcccccCH--HHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           85 PPFDGSNQL-QLFQNILTSTELRFPP--GAIEELHP--DCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        85 ~PF~g~~~~-~~~~~Il~~~~~~~p~--~~~~~ls~--~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      .||...... ..+..+........+.  .....+..  .+.+++.+||..+|.+||++.++++|+|+..
T Consensus       102 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      102 LPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             CCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence            999765433 2333333222111111  11122333  6899999999999999999999999999864

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.83  E-value=3.1e-20  Score=185.14  Aligned_cols=135  Identities=23%  Similarity=0.350  Sum_probs=107.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC-c---cccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA-D---TLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~-~---t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++........ .   ...++..|+|||.+.+..++.++|+|||||+
T Consensus       111 lh~~~i~H~di~p~nili~~~~---~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  187 (257)
T cd05060         111 LESKHFVHRDLAARNVLLVNRH---QAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVT  187 (257)
T ss_pred             HhhcCeeccCcccceEEEcCCC---cEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHH
Confidence            3556999999999999998876   6999999999876433211 1   1123457999999988889999999999999


Q ss_pred             HHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           77 LFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        77 L~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|+|++ |..||...+..+....+.......    .+...+..+++++.+||..+|.+||++.++++
T Consensus       188 l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         188 LWEAFSYGAKPYGEMKGAEVIAMLESGERLP----RPEECPQEIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             HHHHHcCCCCCcccCCHHHHHHHHHcCCcCC----CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            999998 999998877766666554433222    23456789999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.83  E-value=1.1e-20  Score=190.06  Aligned_cols=142  Identities=29%  Similarity=0.526  Sum_probs=109.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhcc-CCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~   78 (568)
                      |..+|+|+||||+||+++.++   .+||+|||++.......  ......++..|+|||.+.+ ..++.++||||||+++|
T Consensus       117 H~~~~~h~dl~p~nil~~~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~  193 (287)
T cd07840         117 HSNGILHRDIKGSNILINNDG---VLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILA  193 (287)
T ss_pred             HHCCceeccCcHHHeEEcCCC---CEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHH
Confidence            557999999999999999877   69999999998765433  2233467888999998764 45788999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCCC----CCC---------------------Ccccc-cCHHHHHHHHHhhccCCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTELR----FPP---------------------GAIEE-LHPDCVDLCRCLLRQNPV  132 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~~----~p~---------------------~~~~~-ls~~~~dLI~~cL~~dP~  132 (568)
                      +|++|+.||...+....+..+.......    ++.                     ..... .++.+.+++++||..+|.
T Consensus       194 el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~  273 (287)
T cd07840         194 ELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPK  273 (287)
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChh
Confidence            9999999998877665555444321100    000                     00112 277899999999999999


Q ss_pred             CCCCHHHHHhchhH
Q 008370          133 ERITFKEFFNHRFL  146 (568)
Q Consensus       133 ~RpTaeElL~Hpff  146 (568)
                      +||++++++.||||
T Consensus       274 ~Rp~~~~~l~~~~~  287 (287)
T cd07840         274 KRISADQALQHEYF  287 (287)
T ss_pred             hCcCHHHHhhCcCC
Confidence            99999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.83  E-value=2.7e-20  Score=185.95  Aligned_cols=134  Identities=25%  Similarity=0.386  Sum_probs=108.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC--ccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~--~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.+......  ....++..|+|||.+.+..++.++|+||||+++|
T Consensus       118 lH~~~i~H~di~p~Nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  194 (260)
T cd05070         118 IERMNYIHRDLRSANILVGDGL---VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT  194 (260)
T ss_pred             HHHCCcccCCCccceEEEeCCc---eEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHH
Confidence            4567999999999999999876   7999999999876543221  1223456799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      +|++ |..||.+.+..+....+.......    .+...+..+.+|+.+||..+|.+|||+.++.
T Consensus       195 ~l~~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~  254 (260)
T cd05070         195 ELVTKGRVPYPGMNNREVLEQVERGYRMP----CPQDCPISLHELMLQCWKKDPEERPTFEYLQ  254 (260)
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHHcCCCCC----CCCcCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence            9999 999999888777776665432222    2345678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.82  E-value=3e-20  Score=191.84  Aligned_cols=135  Identities=27%  Similarity=0.428  Sum_probs=108.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.......   .....++..|+|||++.+..++.++|||||||++
T Consensus       150 lH~~gi~H~dlkp~Nill~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l  226 (314)
T cd05099         150 LESRRCIHRDLAARNVLVTEDN---VMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILM  226 (314)
T ss_pred             HHHCCeeeccccceeEEEcCCC---cEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHH
Confidence            3567999999999999998776   699999999987643221   1122344679999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++ |..||.+....+.+..+........    +..++.++.+++.+||..+|.+||++.++++
T Consensus       227 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         227 WEIFTLGGSPYPGIPVEELFKLLREGHRMDK----PSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            99999 8999988877777766654332222    2356788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.82  E-value=3e-20  Score=185.78  Aligned_cols=134  Identities=25%  Similarity=0.386  Sum_probs=108.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC--ccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~--~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..||+|+||||+||+++.++   .+||+|||+++........  ....++..|+|||.+.+..++.++|+|||||++|
T Consensus       118 lH~~~i~H~dl~~~Nill~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~  194 (260)
T cd05069         118 IERMNYIHRDLRAANILVGDNL---VCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLT  194 (260)
T ss_pred             HHhCCEeecccCcceEEEcCCC---eEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHH
Confidence            4567999999999999998876   6999999999876433221  1234567799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      +|++ |..||.+....+....+.......    .+...+..+.+++.+||..+|.+||++++++
T Consensus       195 el~t~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~  254 (260)
T cd05069         195 ELVTKGRVPYPGMVNREVLEQVERGYRMP----CPQGCPESLHELMKLCWKKDPDERPTFEYIQ  254 (260)
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcCCCCC----CCcccCHHHHHHHHHHccCCcccCcCHHHHH
Confidence            9999 999999887777666655432222    2335778999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.82  E-value=1.7e-20  Score=190.70  Aligned_cols=145  Identities=26%  Similarity=0.510  Sum_probs=112.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhcc--CCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQN--HKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~--~~ys~ksDIWSlGvi   76 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++......  ......|+..|++||.+..  ..++.++|+||||++
T Consensus       121 lH~~~i~H~dl~p~nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~  197 (290)
T cd05613         121 LHKLGIIYRDIKLENILLDSNG---HVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVL  197 (290)
T ss_pred             HHhCCeeccCCCHHHeEECCCC---CEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHH
Confidence            4667999999999999998876   79999999998764322  2234678999999999865  346788999999999


Q ss_pred             HHHHHhCCCCCCCCcHH----HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHH
Q 008370           77 LFQLVTGKPPFDGSNQL----QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLG  147 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~----~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~  147 (568)
                      +|+|++|..||......    .....+.. ....+    +..+++.+.+++.+||..+|.+|+     ++++++.||||.
T Consensus       198 l~~ll~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~  272 (290)
T cd05613         198 MYELLTGASPFTVDGEKNSQAEISRRILK-SEPPY----PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQ  272 (290)
T ss_pred             HHHHhcCCCCCCcCCccccHHHHHHHhhc-cCCCC----CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccc
Confidence            99999999999753322    22222222 12222    235788999999999999999997     899999999998


Q ss_pred             HhHHhh
Q 008370          148 ELRQTV  153 (568)
Q Consensus       148 ~~~~~~  153 (568)
                      ...+..
T Consensus       273 ~~~~~~  278 (290)
T cd05613         273 KINWDD  278 (290)
T ss_pred             cCCHHH
Confidence            887643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.82  E-value=1.1e-20  Score=219.79  Aligned_cols=144  Identities=17%  Similarity=0.247  Sum_probs=103.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCC----------------CCCcEEEeecccceecCCCC-----------------CCccc
Q 008370            1 MCYVFMIVSANACQNLLVSTNE----------------VTPVLKIGDFGFARSLTPQD-----------------LADTL   47 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~----------------~~~vvKL~DFGlAr~l~~~~-----------------~~~t~   47 (568)
                      ||..|||||||||+||||+..+                ....+||+|||+++......                 .....
T Consensus        96 lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (793)
T PLN00181         96 AHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILA  175 (793)
T ss_pred             HHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCccccccc
Confidence            4667999999999999996421                12357888888876432100                 01124


Q ss_pred             cCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhh
Q 008370           48 CGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL  127 (568)
Q Consensus        48 ~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL  127 (568)
                      +||++|||||++.+..|+.++|||||||+||||++|.+|+....  ..+..+...   ..|+.. ....+...+++.+||
T Consensus       176 ~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~L  249 (793)
T PLN00181        176 MEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHR---VLPPQI-LLNWPKEASFCLWLL  249 (793)
T ss_pred             CCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHh---hcChhh-hhcCHHHHHHHHHhC
Confidence            68999999999999999999999999999999999988876432  122222111   112211 122456778999999


Q ss_pred             ccCCCCCCCHHHHHhchhHHHhH
Q 008370          128 RQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus       128 ~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ..+|.+||++.|+++||||....
T Consensus       250 ~~~P~~Rps~~eil~h~~~~~~~  272 (793)
T PLN00181        250 HPEPSCRPSMSELLQSEFINEPR  272 (793)
T ss_pred             CCChhhCcChHHHhhchhhhhhh
Confidence            99999999999999999997643

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.82  E-value=3.7e-20  Score=183.36  Aligned_cols=135  Identities=24%  Similarity=0.343  Sum_probs=107.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC--ccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~--~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..|++||||||+||+++.++   .+||+|||+++........  ....+++.|+|||++....++.++|+||||+++|
T Consensus       109 lH~~~~~H~dl~p~nili~~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~  185 (250)
T cd05085         109 LESKNCIHRDLAARNCLVGENN---VLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLW  185 (250)
T ss_pred             HHhCCeeecccChheEEEcCCC---eEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHH
Confidence            3567999999999999998776   6999999999764432211  1223456799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ++++ |..||.+.........+........    +..++..+.+++.+||..+|++||++.++++
T Consensus       186 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         186 ETFSLGVCPYPGMTNQQAREQVEKGYRMSC----PQKCPDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             HHhcCCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            9998 9999988877666655544322222    2357889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.82  E-value=6.4e-21  Score=205.94  Aligned_cols=138  Identities=22%  Similarity=0.309  Sum_probs=107.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC---CCCCCccccCCCcccChhhhcc---CCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT---PQDLADTLCGSPLYMAPEIIQN---HKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~---~~~~~~t~~GT~~YmAPEvl~~---~~ys~ksDIWSlGv   75 (568)
                      |..+|||||||..||++.++.   .|||+|||++..-.   ...-.....|...|||||++..   .+|+..+|||+|||
T Consensus       505 HAK~IIHrDLKSnNIFl~~~~---kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGi  581 (678)
T KOG0193|consen  505 HAKNIIHRDLKSNNIFLHEDL---KVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGI  581 (678)
T ss_pred             hhhhhhhhhccccceEEccCC---cEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhH
Confidence            445899999999999999876   79999999986533   2233455678889999999964   47999999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ++|||++|..||...+..+++..+-++...+.........+.++++|+..||..++++||.+.+|+.
T Consensus       582 V~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  582 VWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            9999999999999666665554443332222222223355669999999999999999999999864

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.82  E-value=2.9e-20  Score=185.50  Aligned_cols=135  Identities=21%  Similarity=0.413  Sum_probs=107.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCc--cccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD--TLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~--t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+||+++.++   .+||+|||+++.........  ...++..|+|||.+.+..++.++|+|||||++|+
T Consensus       117 H~~~i~H~dl~p~ni~i~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~  193 (256)
T cd05059         117 ESNGFIHRDLAARNCLVGEDN---VVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWE  193 (256)
T ss_pred             HHCCcccccccHhhEEECCCC---cEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence            456899999999999999876   69999999998764322111  1123457999999998889999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++ |..||.+....+....+........+    ...+..+.+++.+||..+|++||++.++++.
T Consensus       194 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         194 VFSEGKMPYERFSNSEVVESVSAGYRLYRP----KLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             HhccCCCCCCCCCHHHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            999 89999887777666666543332222    3568899999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.82  E-value=3.7e-20  Score=185.80  Aligned_cols=134  Identities=25%  Similarity=0.363  Sum_probs=108.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC--ccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~--~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+||+++.++   .+||+|||+++.+......  ....++..|++||++.+..++.++|+|||||++|+
T Consensus       119 H~~~i~H~dl~p~Nill~~~~---~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e  195 (262)
T cd05071         119 ERMNYVHRDLRAANILVGENL---VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE  195 (262)
T ss_pred             HHCCccccccCcccEEEcCCC---cEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHH
Confidence            567999999999999999876   6999999999876543321  22345667999999988889999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |++ |..||.+....+....+........    ...++..+.+++.+||+.+|.+||++.++++
T Consensus       196 llt~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         196 LTTKGRVPYPGMVNREVLDQVERGYRMPC----PPECPESLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             HHcCCCCCCCCCChHHHHHHHhcCCCCCC----ccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            999 8999988877776666654322222    2357889999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.82  E-value=3.5e-20  Score=185.36  Aligned_cols=136  Identities=19%  Similarity=0.350  Sum_probs=108.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCc--cccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD--TLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~--t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..||+|+||||.||+++.++   .+||+|||+++.........  ...++..|++||.+.+..++.++|+|||||++|
T Consensus       116 lH~~~i~H~dl~p~nili~~~~---~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~  192 (256)
T cd05113         116 LESKQFIHRDLAARNCLVDDQG---CVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMW  192 (256)
T ss_pred             HHhCCeeccccCcceEEEcCCC---CEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHH
Confidence            3567999999999999998776   79999999998664432211  123456799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||...+..+....+........    ....+..+.+++.+||..+|.+||++.+++.+
T Consensus       193 ~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         193 EVYSLGKMPYERFNNSETVEKVSQGLRLYR----PHLASEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             HHhcCCCCCcCcCCHHHHHHHHhcCCCCCC----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence            9998 9999988777666666654432222    22457899999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.82  E-value=3e-20  Score=186.87  Aligned_cols=135  Identities=19%  Similarity=0.288  Sum_probs=107.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCc--cccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD--TLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~--t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+|||++.++   .+|++|||.+..........  ...++..|+|||++.+..++.++|||||||++|
T Consensus       123 lH~~~iiH~dikp~nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  199 (266)
T cd05064         123 LSEMGYVHKGLAAHKVLVNSDL---VCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMW  199 (266)
T ss_pred             HHHCCEeeccccHhhEEEcCCC---cEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHH
Confidence            3556999999999999998776   79999999876543322222  233567899999999899999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ++++ |..||.+....+....+......+.    +..++..+.+++.+||..+|.+||+++++++
T Consensus       200 ell~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         200 EVMSYGERPYWDMSGQDVIKAVEDGFRLPA----PRNCPNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHhcCCCCCcCcCCHHHHHHHHHCCCCCCC----CCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence            9775 9999998887776666654322222    3457789999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.82  E-value=4.7e-20  Score=183.34  Aligned_cols=136  Identities=26%  Similarity=0.456  Sum_probs=109.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.+....    ......++..|++||.+....++.++|+|||||+
T Consensus       113 lH~~~i~H~di~p~nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~  189 (257)
T cd05040         113 LESKRFIHRDLAARNILLASDD---KVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVT  189 (257)
T ss_pred             HHhCCccccccCcccEEEecCC---EEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHH
Confidence            3567999999999999999886   79999999998765422    1223457788999999988889999999999999


Q ss_pred             HHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           77 LFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        77 L~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|+|++ |..||...+..+....+..... .  ...+...+..+.+++.+||..+|++||++.++++
T Consensus       190 l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         190 LWEMFTYGEEPWAGLSGSQILKKIDKEGE-R--LERPEACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHhcCC-c--CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence            999998 9999988877776666553221 1  1122356789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.82  E-value=2.1e-20  Score=187.42  Aligned_cols=137  Identities=35%  Similarity=0.639  Sum_probs=113.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---------------------CCccccCCCcccChhhhc
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---------------------LADTLCGSPLYMAPEIIQ   60 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---------------------~~~t~~GT~~YmAPEvl~   60 (568)
                      |..||+|+||||+||+++.++   .++|+|||++.......                     ......|+..|++||++.
T Consensus       119 h~~~~~H~dl~~~ni~i~~~~---~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~  195 (280)
T cd05581         119 HSKGIIHRDLKPENILLDKDM---HIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLN  195 (280)
T ss_pred             HHCCeeecCCCHHHeEECCCC---CEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhC
Confidence            557999999999999998776   69999999988654322                     122346788999999998


Q ss_pred             cCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH---
Q 008370           61 NHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF---  137 (568)
Q Consensus        61 ~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa---  137 (568)
                      ...++.++|+||||+++|++++|+.||........+..+... ...++    ..+++.+.+|+.+||..+|.+||++   
T Consensus       196 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~  270 (280)
T cd05581         196 EKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKL-EYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEG  270 (280)
T ss_pred             CCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhc-CCCCC----CccCHHHHHHHHHHhcCCHhhCCCcccC
Confidence            888899999999999999999999999988766666655432 23333    3568899999999999999999999   


Q ss_pred             -HHHHhchhH
Q 008370          138 -KEFFNHRFL  146 (568)
Q Consensus       138 -eElL~Hpff  146 (568)
                       +++++||||
T Consensus       271 ~~~ll~~~~~  280 (280)
T cd05581         271 YDELKAHPFF  280 (280)
T ss_pred             HHHHhcCCCC
Confidence             999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.82  E-value=5e-20  Score=184.41  Aligned_cols=138  Identities=29%  Similarity=0.491  Sum_probs=109.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCC--CCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNE--VTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA   75 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~--~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGv   75 (568)
                      ||..+|+|+||||+||+++.++  ....+||+|||+++.......   .....++..|+|||++.+..++.++|||||||
T Consensus       122 lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~  201 (269)
T cd05044         122 LEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGV  201 (269)
T ss_pred             HHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHH
Confidence            3567899999999999998765  233699999999976543221   12334567899999999888999999999999


Q ss_pred             HHHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           76 ILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        76 iL~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ++|+|++ |..||...+..+....+........+    ..++..+.+++.+||..+|.+||+++++++
T Consensus       202 il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         202 LMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKP----ENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             HHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCc----ccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            9999998 99999887776666655443333222    356788999999999999999999999854

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.82  E-value=4e-20  Score=192.67  Aligned_cols=136  Identities=26%  Similarity=0.434  Sum_probs=109.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.......   .....++..|+|||++.+..++.++|||||||++
T Consensus       150 LH~~givH~dlkp~Nill~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  226 (334)
T cd05100         150 LASQKCIHRDLAARNVLVTEDN---VMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLL  226 (334)
T ss_pred             HHHCCeeccccccceEEEcCCC---cEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHH
Confidence            4567999999999999998876   799999999987643221   1223345679999999988899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+|++ |..||.+.+..+....+........    +...+..+.+++.+||+.+|.+||++.+++++
T Consensus       227 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         227 WEIFTLGGSPYPGIPVEELFKLLKEGHRMDK----PANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            99998 8999998887777666654332222    23567889999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.82  E-value=2.4e-20  Score=195.60  Aligned_cols=146  Identities=31%  Similarity=0.481  Sum_probs=113.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      +|..||+||||||+||+++.++   .+||+|||+++.....  .....+++.|++||.+.+ ..++.++|+||+||++|+
T Consensus       134 LH~~gi~H~dlkp~Nill~~~~---~~kl~dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~  208 (343)
T cd07880         134 IHAAGIIHRDLKPGNLAVNEDC---ELKILDFGLARQTDSE--MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAE  208 (343)
T ss_pred             HHhCCeecCCCCHHHEEEcCCC---CEEEeecccccccccC--ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence            3567999999999999998776   6999999999865432  234567889999999865 457889999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCC----------------------CCC----CCcccccCHHHHHHHHHhhccCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTEL----------------------RFP----PGAIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~----------------------~~p----~~~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      +++|..||.+.+....+..+......                      .+.    ......+++.+.+++.+||..||.+
T Consensus       209 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~  288 (343)
T cd07880         209 MLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAES  288 (343)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhh
Confidence            99999999887765554444321100                      000    0112356778999999999999999


Q ss_pred             CCCHHHHHhchhHHHhHH
Q 008370          134 RITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       134 RpTaeElL~Hpff~~~~~  151 (568)
                      |||+.+++.||||+....
T Consensus       289 R~t~~~~l~~~~~~~~~~  306 (343)
T cd07880         289 RITAAEALAHPYFEEFHD  306 (343)
T ss_pred             CCCHHHHhcCccHhhhcC
Confidence            999999999999987754

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.82  E-value=4.2e-20  Score=185.17  Aligned_cols=136  Identities=21%  Similarity=0.338  Sum_probs=108.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCc--cccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLAD--TLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~--t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.... .....  ...+++.|+|||.+.+..++.++|+||||+++
T Consensus       122 Lh~~~i~H~di~p~nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l  198 (266)
T cd05033         122 LSEMNYVHRDLAARNILVNSNL---VCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVM  198 (266)
T ss_pred             HHhCCcccCCCCcceEEEcCCC---CEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHH
Confidence            3567999999999999998876   699999999987642 11111  22345679999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+|++ |..||......+....+........    +...+..+.+++.+||+.+|.+||++++++++
T Consensus       199 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         199 WEVMSYGERPYWDMSNQDVIKAVEDGYRLPP----PMDCPSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HHHHccCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            99998 9999987776666666654322222    23568899999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.82  E-value=3.3e-20  Score=185.92  Aligned_cols=139  Identities=24%  Similarity=0.458  Sum_probs=111.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC----CCCccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ----DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~----~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      ||..||+|+||||+||+++.++   .+||+|||+++.....    .......|+..|+|||.+.+..++.++|+|||||+
T Consensus       122 LH~~~i~H~dl~p~ni~i~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  198 (264)
T cd06653         122 LHSNMIVHRDIKGANILRDSAG---NVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACT  198 (264)
T ss_pred             HHhCCEecCCCCHHHEEEcCCC---CEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHH
Confidence            3566999999999999998776   6999999999865321    11234568899999999988888999999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      +|+|++|+.||..........++....   .++..+..++..+.+++.+||. +|..||++.+++.|||+
T Consensus       199 l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         199 VVEMLTEKPPWAEYEAMAAIFKIATQP---TKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHHHHhCCCCCCccCHHHHHHHHHcCC---CCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence            999999999998776555554443222   2223345678899999999999 57999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.82  E-value=4.1e-20  Score=185.40  Aligned_cols=136  Identities=18%  Similarity=0.407  Sum_probs=109.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.......   .....+++.|++||.+....++.++|||||||++
T Consensus       129 lH~~~i~H~dikp~nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il  205 (273)
T cd05074         129 LSSKNFIHRDLAARNCMLNENM---TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTM  205 (273)
T ss_pred             HHhCCEeecccchhhEEEcCCC---CEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHH
Confidence            4667999999999999998765   699999999987543221   1233456789999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+|++ |++||.+.+..+....+........+    ...+..+.+++.+||..+|.+||++.+++.+
T Consensus       206 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         206 WEIMTRGQTPYAGVENSEIYNYLIKGNRLKQP----PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             HHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999 89999888777666666544333322    2467899999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.82  E-value=3.9e-20  Score=186.76  Aligned_cols=135  Identities=23%  Similarity=0.388  Sum_probs=108.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.+.....   .....++..|+|||++.+..++.++|||||||++
T Consensus       133 LH~~~i~H~di~p~nil~~~~~---~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l  209 (280)
T cd05043         133 LHKRGVIHKDIAARNCVIDEEL---QVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLL  209 (280)
T ss_pred             HHHCCEeecccCHhhEEEcCCC---cEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHH
Confidence            3557999999999999998776   799999999986543221   1223456679999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |++++ |+.||...+..+....+.......    ....+++.+.+++.+||..+|++||++.++++
T Consensus       210 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         210 WELMTLGQTPYVEIDPFEMAAYLKDGYRLA----QPINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             HHHhcCCCCCcCcCCHHHHHHHHHcCCCCC----CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            99998 999999887776665554432222    22356789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.82  E-value=4.8e-20  Score=183.68  Aligned_cols=135  Identities=23%  Similarity=0.387  Sum_probs=109.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC-CccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~-~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++....... .....++..|++||.+....++.++|+||||+++|+
T Consensus       120 lH~~~i~h~dl~~~nilv~~~~---~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~  196 (261)
T cd05148         120 LEEQNSIHRDLAARNILVGEDL---VCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYE  196 (261)
T ss_pred             HHHCCeeccccCcceEEEcCCc---eEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHH
Confidence            3556999999999999999876   799999999977643221 123345667999999988889999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |++ |+.||.+.+..+.+..+........    +...++.+.+++.+||+.+|.+|||+.++++
T Consensus       197 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         197 MFTYGQVPYPGMNNHEVYDQITAGYRMPC----PAKCPQEIYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             HHcCCCCCCCcCCHHHHHHHHHhCCcCCC----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            998 8999998887777776664322222    2366789999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.82  E-value=8.7e-20  Score=180.43  Aligned_cols=135  Identities=30%  Similarity=0.489  Sum_probs=110.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCcc--ccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADT--LCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t--~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++..........  ..+++.|++||.+....++.++|+|++||++|
T Consensus       119 lh~~~~~h~dl~~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~  195 (258)
T smart00219      119 LESKNFIHRDLAARNCLVGENL---VVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLW  195 (258)
T ss_pred             HhcCCeeecccccceEEEccCC---eEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHH
Confidence            4667999999999999999877   799999999987654422221  23678899999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|++ |.+||...+.......+........+    ...+.++.+++.+||..+|.+|||+.++++
T Consensus       196 ~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      196 EIFTLGESPYPGMSNEEVLEYLKKGYRLPKP----ENCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHhcCCCCCCC----CcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence            9998 89999887777777666554333322    347889999999999999999999999864

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.82  E-value=6.9e-20  Score=182.97  Aligned_cols=135  Identities=27%  Similarity=0.401  Sum_probs=108.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+||+++.++   .++|+|||+++.......  .....++..|++||++....++.++|+||||+++|
T Consensus       118 LH~~~i~H~dl~p~ni~i~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~  194 (260)
T cd05067         118 IERKNYIHRDLRAANILVSETL---CCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT  194 (260)
T ss_pred             HhcCCeecccccHHhEEEcCCC---CEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHH
Confidence            5677999999999999999876   699999999987653222  12234567899999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ++++ |+.||.+.+..+....+......    ..+...+..+.+++.+||..+|++||++++++.
T Consensus       195 el~~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         195 EIVTYGRIPYPGMTNPEVIQNLERGYRM----PRPDNCPEELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             HHHhCCCCCCCCCChHHHHHHHHcCCCC----CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            9999 99999988776666655433222    223456789999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.82  E-value=2.5e-20  Score=189.20  Aligned_cols=144  Identities=26%  Similarity=0.499  Sum_probs=110.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhccCC--CCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHK--YDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~~~~--ys~ksDIWSlGvi   76 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.......  .....|+..|++||.+.+..  ++.++|+||||++
T Consensus       121 lH~~~~~H~dl~p~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~i  197 (288)
T cd05583         121 LHQLGIIYRDIKLENILLDSEG---HVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVL  197 (288)
T ss_pred             HHHCCeeccCCCHHHeEECCCC---CEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHH
Confidence            4667999999999999998876   699999999887543321  22356889999999987654  6788999999999


Q ss_pred             HHHHHhCCCCCCCCcH----HHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC---HHHHHhchhHHHh
Q 008370           77 LFQLVTGKPPFDGSNQ----LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT---FKEFFNHRFLGEL  149 (568)
Q Consensus        77 L~ELltG~~PF~g~~~----~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT---aeElL~Hpff~~~  149 (568)
                      +|+|++|..||.....    .+....+... ...    .+..++..+.+++.+||..+|++|||   +.++++||||+.+
T Consensus       198 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~  272 (288)
T cd05583         198 TFELLTGASPFTVDGEQNSQSEISRRILKS-KPP----FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI  272 (288)
T ss_pred             HHHHHhCCCCcccCcccchHHHHHHHHHcc-CCC----CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence            9999999999964332    2222222221 222    22356789999999999999999998   5677999999887


Q ss_pred             HHh
Q 008370          150 RQT  152 (568)
Q Consensus       150 ~~~  152 (568)
                      .+.
T Consensus       273 ~~~  275 (288)
T cd05583         273 DWD  275 (288)
T ss_pred             CHH
Confidence            664

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.82  E-value=4e-20  Score=184.88  Aligned_cols=137  Identities=26%  Similarity=0.512  Sum_probs=108.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+|+|+||||+||+++.++   .+||+|||++....... ......|++.|+|||.+.+..++.++|+||+|+++|+
T Consensus       122 LH~~~i~H~dl~~~nil~~~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~e  198 (267)
T cd08228         122 MHSRRVMHRDIKPANVFITATG---VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE  198 (267)
T ss_pred             HhhCCeeCCCCCHHHEEEcCCC---CEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHH
Confidence            4667999999999999998876   69999999998765332 2234578889999999988889999999999999999


Q ss_pred             HHhCCCCCCCCc--HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           80 LVTGKPPFDGSN--QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        80 LltG~~PF~g~~--~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++|+.||....  .......+...   ..++......+..+.+++.+||..+|.+||++.++++.
T Consensus       199 l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         199 MAALQSPFYGDKMNLFSLCQKIEQC---DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             HhcCCCCCccccccHHHHHHHHhcC---CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence            999999997543  23333333322   22333334567889999999999999999999999754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.81  E-value=3.6e-20  Score=190.38  Aligned_cols=135  Identities=27%  Similarity=0.426  Sum_probs=107.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC---ccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA---DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~---~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+||+++.++   .+||+|||+++........   ....+++.|+|||++.+..++.++|+|||||++|
T Consensus       157 H~~gi~H~dlkp~Nill~~~~---~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~  233 (307)
T cd05098         157 ASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW  233 (307)
T ss_pred             HHCCcccccccHHheEEcCCC---cEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHH
Confidence            456999999999999998876   7999999999765432211   1123456799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+....+....+........    +...+.++.+|+.+||..+|.+||++.+++++
T Consensus       234 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         234 EIFTLGGSPYPGVPVEELFKLLKEGHRMDK----PSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             HHHcCCCCCCCcCCHHHHHHHHHcCCCCCC----CCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            9998 8999988776666655543322222    23567899999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.81  E-value=6e-20  Score=184.33  Aligned_cols=138  Identities=21%  Similarity=0.392  Sum_probs=105.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhcc-------CCCCcccch
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQN-------HKYDAKADL   70 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~-------~~ys~ksDI   70 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.......   .....+++.|+|||++..       ..++.++||
T Consensus       116 lH~~~ivH~dlkp~Nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Di  192 (269)
T cd05042         116 LHQADFIHSDLALRNCQLTADL---SVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNI  192 (269)
T ss_pred             HHhcCEecccccHhheEecCCC---cEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHH
Confidence            4667999999999999999876   699999999876433221   122345677999999743       356788999


Q ss_pred             hhHHHHHHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCC-CcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           71 WSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPP-GAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        71 WSlGviL~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~-~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ||+||++|+|++ |..||......+.+..+.......++. .....++..+.+++..|| .||++||++++|++
T Consensus       193 wslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         193 WSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            999999999999 889998877766666655544433332 233456788899999998 59999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.81  E-value=5.5e-20  Score=186.69  Aligned_cols=135  Identities=24%  Similarity=0.434  Sum_probs=108.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.......   .....++..|+|||.+.+..++.++|||||||++
T Consensus       146 lH~~~i~H~dl~p~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il  222 (288)
T cd05050         146 LSERKFVHRDLATRNCLVGENM---VVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVL  222 (288)
T ss_pred             HHhCCeecccccHhheEecCCC---ceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHH
Confidence            3556999999999999998776   799999999986543321   1223345679999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++ |..||.+....+....+........+    ...+..+.+|+.+||+.+|.+||++.|+++
T Consensus       223 ~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         223 WEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCP----DNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            99997 88999888877777666544332222    356789999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.81  E-value=6.8e-21  Score=211.56  Aligned_cols=142  Identities=24%  Similarity=0.343  Sum_probs=110.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCC--CCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNE--VTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~--~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlG   74 (568)
                      +|..+||||||||+||||+...  ....++|+|||+++.+..+.    ...+..||-+|+|||++....-...+||+|+|
T Consensus       622 LHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslG  701 (903)
T KOG1027|consen  622 LHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLG  701 (903)
T ss_pred             HHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcC
Confidence            4678999999999999999842  23478999999999886543    34567799999999999888778899999999


Q ss_pred             HHHHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           75 AILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        75 viL~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|..++ |..||....  +.-.+|+.+..--..-..  ....++.+||.+|+..+|..||++.+|+.||||
T Consensus       702 CvfyYvltgG~HpFGd~~--~R~~NIl~~~~~L~~L~~--~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlF  770 (903)
T KOG1027|consen  702 CVFYYVLTGGSHPFGDSL--ERQANILTGNYTLVHLEP--LPDCEAKDLISRMLNPDPQLRPSATDVLNHPLF  770 (903)
T ss_pred             ceEEEEecCCccCCCchH--HhhhhhhcCccceeeecc--CchHHHHHHHHHhcCCCcccCCCHHHHhCCCcc
Confidence            99999988 589996543  333356554321111100  111288999999999999999999999999998

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.81  E-value=7.2e-20  Score=181.40  Aligned_cols=135  Identities=26%  Similarity=0.370  Sum_probs=106.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC---ccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA---DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~---~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++........   ....++..|+|||.+.+..++.++|+|||||++
T Consensus       109 lH~~~i~h~di~p~nili~~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~  185 (251)
T cd05041         109 LESKNCIHRDLAARNCLVGENN---VLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILL  185 (251)
T ss_pred             HHhCCEehhhcCcceEEEcCCC---cEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHH
Confidence            4567999999999999998876   7999999999765422111   122335569999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++ |..||.+.........+.......    .+...+..+.+++.+||..+|.+||+++|+++
T Consensus       186 ~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         186 WETFSLGDTPYPGMSNQQTRERIESGYRMP----APQLCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             HHHHhccCCCCccCCHHHHHHHHhcCCCCC----CCccCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            99999 899998877666555554332222    22456789999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.81  E-value=6e-20  Score=186.66  Aligned_cols=139  Identities=24%  Similarity=0.313  Sum_probs=106.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++......   ......+++.|+|||.+.+..++.++|||||||++
T Consensus       146 LH~~~i~H~dlkp~Nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l  222 (296)
T cd05051         146 LESLNFVHRDLATRNCLVGKNY---TIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTL  222 (296)
T ss_pred             HHHcCccccccchhceeecCCC---ceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHH
Confidence            3567999999999999999876   79999999998654332   22344567789999999888899999999999999


Q ss_pred             HHHHh--CCCCCCCCcHHHHHHHHHhcc---CCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT--GKPPFDGSNQLQLFQNILTST---ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt--G~~PF~g~~~~~~~~~Il~~~---~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++  |..||......+.+..+....   ........+...+.++.+++.+||..+|.+||++.++++
T Consensus       223 ~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         223 WEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             HHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            99998  778998776666655544320   011111122345689999999999999999999999953

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.81  E-value=5.1e-20  Score=182.80  Aligned_cols=134  Identities=25%  Similarity=0.336  Sum_probs=104.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC---ccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA---DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~---~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+|+||||||.||+++.++   .+||+|||+++........   ....++..|+|||.+.+..++.++|+|||||++|
T Consensus       111 H~~~i~H~dl~p~nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~  187 (252)
T cd05084         111 ESKHCIHRDLAARNCLVTEKN---VLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLW  187 (252)
T ss_pred             HhCCccccccchheEEEcCCC---cEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHH
Confidence            556999999999999998776   6999999998765432111   1112245699999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|++ |..||...........+.......    .+...+..+.+|+.+||..+|.+||++.++++
T Consensus       188 e~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         188 EAFSLGAVPYANLSNQQTREAIEQGVRLP----CPELCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             HHHhCCCCCccccCHHHHHHHHHcCCCCC----CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9998 999998776655555444332222    23356789999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.81  E-value=1.7e-20  Score=185.92  Aligned_cols=131  Identities=27%  Similarity=0.365  Sum_probs=104.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..+|+||||||+||+++.++   .+|++|||++......  .....++..|+|||.+....++.++|+||+||++|+|+
T Consensus       102 H~~~i~H~dlkp~Nil~~~~~---~~~l~df~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~  176 (237)
T cd05576         102 HREGIVCRDLNPNNILLDDRG---HIQLTYFSRWSEVEDS--CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELL  176 (237)
T ss_pred             HhCCeeccCCCHHHEEEcCCC---CEEEecccchhccccc--cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHH
Confidence            557999999999999999877   6999999988765432  23345677899999998888899999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH-----HHHHhchhH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF-----KEFFNHRFL  146 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa-----eElL~Hpff  146 (568)
                      +|..||......     +.......+|    ..+++.+.+++.+||+.||.+|+++     +++++||||
T Consensus       177 ~g~~~~~~~~~~-----~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         177 TGKTLVECHPSG-----INTHTTLNIP----EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             HCcchhhcCchh-----cccccccCCc----ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            999887643211     1111111222    3567899999999999999999985     999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.81  E-value=5.9e-20  Score=183.65  Aligned_cols=134  Identities=25%  Similarity=0.529  Sum_probs=106.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+|+||||+||+++.++   .+||+|||+++...... ......|+..|+|||.+.+..++.++|+||||+++|+|
T Consensus       123 H~~~i~H~dl~p~nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l  199 (267)
T cd08229         123 HSRRVMHRDIKPANVFITATG---VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM  199 (267)
T ss_pred             HHCCeecCCCCHHHEEEcCCC---CEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHH
Confidence            556999999999999998776   69999999987664332 23345789999999999888899999999999999999


Q ss_pred             HhCCCCCCCCcH--HHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           81 VTGKPPFDGSNQ--LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        81 ltG~~PF~g~~~--~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      ++|..||.+...  ......+...   ..++......++.+.+++.+||..+|.+|||+.+|+
T Consensus       200 ~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~  259 (267)
T cd08229         200 AALQSPFYGDKMNLYSLCKKIEQC---DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVY  259 (267)
T ss_pred             HhCCCCcccccchHHHHhhhhhcC---CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHH
Confidence            999999976543  2333333322   223223345778999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.81  E-value=1e-20  Score=204.94  Aligned_cols=143  Identities=34%  Similarity=0.620  Sum_probs=124.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCC-cccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYD-AKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys-~ksDIWSlGviL~EL   80 (568)
                      |...|||||||.+||||+.+.   .+||+|||++..+.......+.||++.|.|||++.+..|+ +.+|+|++|+++|.|
T Consensus       172 H~k~ivHrdLk~eNilL~~~m---nikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~L  248 (596)
T KOG0586|consen  172 HSKNIVHRDLKAENILLDENM---NIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYAL  248 (596)
T ss_pred             hhcceeccccchhhccccccc---ceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheee
Confidence            446899999999999999987   4999999999999888888999999999999999998886 669999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      +.|..||.|.+-.+...+.+.+ .+++|    ..++.+|.++|+++|..+|.+|+++++++.|+|.......
T Consensus       249 V~GsLPFDG~~lk~Lr~rvl~g-k~rIp----~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~  315 (596)
T KOG0586|consen  249 VEGSLPFDGQNLKELRPRVLRG-KYRIP----FYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA  315 (596)
T ss_pred             eecccccCCcccccccchheee-eeccc----ceeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh
Confidence            9999999998876666555543 33444    3678899999999999999999999999999999766544

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.81  E-value=9.1e-20  Score=183.11  Aligned_cols=136  Identities=24%  Similarity=0.427  Sum_probs=109.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC--ccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~--~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      +|..+|+||||||+||+++.++   .+||+|||+++........  ....+++.|+|||.+....++.++|+|||||++|
T Consensus       123 lH~~~~~H~dl~p~nili~~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  199 (270)
T cd05056         123 LESKRFVHRDIAARNVLVSSPD---CVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMW  199 (270)
T ss_pred             HHhCCeeccccChheEEEecCC---CeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHH
Confidence            3567999999999999999876   7999999999876543321  1223456799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ++++ |..||.+....+....+........+    ..++..+.+++.+||..+|.+|||+.+++..
T Consensus       200 el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         200 EILMLGVKPFQGVKNNDVIGRIENGERLPMP----PNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             HHHHcCCCCCCCCCHHHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9986 99999988777666666544333333    3567899999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.81  E-value=8.3e-20  Score=187.59  Aligned_cols=136  Identities=26%  Similarity=0.313  Sum_probs=106.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.......   .....++..|++||.+.+..++.++|||||||++
T Consensus       125 LH~~~ivH~dikp~Nill~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l  201 (303)
T cd05110         125 LEERRLVHRDLAARNVLVKSPN---HVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTI  201 (303)
T ss_pred             HhhcCeeccccccceeeecCCC---ceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHH
Confidence            4667999999999999998766   699999999987643221   2223456789999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+|++ |..||.+....+....+........    +...+.++.+++.+||..+|++||++.++++.
T Consensus       202 ~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         202 WELMTFGGKPYDGIPTREIPDLLEKGERLPQ----PPICTIDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHCCCCCCC----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99997 9999988765554443332222222    23456789999999999999999999998764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.81  E-value=7.2e-20  Score=188.34  Aligned_cols=136  Identities=25%  Similarity=0.419  Sum_probs=107.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+|+||||+|||++.++   .+||+|||+++.......   .....+++.|+|||.+.+..++.++||||+||++
T Consensus       157 lH~~~ivH~dlkp~Nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil  233 (302)
T cd05055         157 LASKNCIHRDLAARNVLLTHGK---IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILL  233 (302)
T ss_pred             HHHCCeehhhhccceEEEcCCC---eEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHH
Confidence            3567999999999999998766   799999999986543221   2233456789999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++ |..||.+....+.+........   +...+...++.+.+++.+||..+|++||++.++++
T Consensus       234 ~el~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         234 WEIFSLGSNPYPGMPVDSKFYKLIKEGY---RMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             HHHHhCCCCCcCCCCchHHHHHHHHcCC---cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            99998 9999988776555544443321   11222356789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.81  E-value=2e-20  Score=209.70  Aligned_cols=134  Identities=30%  Similarity=0.478  Sum_probs=107.6

Q ss_pred             CCCC--CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CC---------ccccCCCcccChhhh---ccCCCC
Q 008370            1 MCYV--FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LA---------DTLCGSPLYMAPEII---QNHKYD   65 (568)
Q Consensus         1 m~~~--~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~---------~t~~GT~~YmAPEvl---~~~~ys   65 (568)
                      |||.  +|||||||-+||||+.++   .+||||||.|....... ..         -....|+.|+|||++   .+.+.+
T Consensus       160 mH~~~pPiIHRDLKiENvLls~~g---~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~  236 (738)
T KOG1989|consen  160 MHYLKPPIIHRDLKIENVLLSADG---NYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIG  236 (738)
T ss_pred             HhcCCCccchhhhhhhheEEcCCC---CEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCc
Confidence            6775  599999999999999988   69999999986432211 00         013468999999987   567889


Q ss_pred             cccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhch
Q 008370           66 AKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHR  144 (568)
Q Consensus        66 ~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hp  144 (568)
                      .|+|||+|||+||.|+....||.......    |+. ..+.+|+.  ...+..+++||+.||+.||.+||++-+++.+-
T Consensus       237 eKsDIWALGclLYkLCy~t~PFe~sg~la----Iln-g~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~  308 (738)
T KOG1989|consen  237 EKSDIWALGCLLYKLCYFTTPFEESGKLA----ILN-GNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEEI  308 (738)
T ss_pred             chhHHHHHHHHHHHHHHhCCCcCcCccee----EEe-ccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHHH
Confidence            99999999999999999999998764432    333 46667764  47788999999999999999999999997663

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.81  E-value=9.2e-20  Score=181.43  Aligned_cols=133  Identities=23%  Similarity=0.393  Sum_probs=106.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..|++||||||+||+++.++   .+||+|||+++.....  ......+..|+|||.+.+..++.++|+|||||++|+|
T Consensus       116 lH~~~~~H~dl~p~nili~~~~---~~kl~Dfg~~~~~~~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el  190 (254)
T cd05083         116 LESKKLVHRDLAARNILVSEDG---VAKVSDFGLARVGSMG--VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEV  190 (254)
T ss_pred             HHhCCeeccccCcceEEEcCCC---cEEECCCccceecccc--CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHH
Confidence            3567999999999999998876   6999999999764322  1223345679999999888899999999999999999


Q ss_pred             Hh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           81 VT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        81 lt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ++ |+.||.+....+....+.......    ....++..+.+++.+||..+|.+||++.+++.
T Consensus       191 ~~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         191 FSYGRAPYPKMSLKEVKECVEKGYRME----PPEGCPADVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             HhCCCCCCccCCHHHHHHHHhCCCCCC----CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            97 999998887766665554432222    22456889999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.81  E-value=8.4e-20  Score=181.69  Aligned_cols=133  Identities=23%  Similarity=0.398  Sum_probs=107.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..+|+||||||.||+++.++   .+||+|||+++.......  ...++..|+|||.+....++.++|+||||+++|++
T Consensus       118 lh~~~i~H~di~p~Nili~~~~---~~~l~d~g~~~~~~~~~~--~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l  192 (256)
T cd05039         118 LEEKNFVHRDLAARNVLVSEDL---VAKVSDFGLAKEASQGQD--SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI  192 (256)
T ss_pred             HHhCCccchhcccceEEEeCCC---CEEEcccccccccccccc--cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHH
Confidence            3567999999999999998876   699999999987643221  23345679999999888889999999999999999


Q ss_pred             Hh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           81 VT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        81 lt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ++ |..||......+....+......    ..+...++.+.+++.+||..+|.+||+++++++
T Consensus       193 ~~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         193 YSFGRVPYPRIPLKDVVPHVEKGYRM----EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             HhcCCCCCCCCCHHHHHHHHhcCCCC----CCccCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            97 99999888776666555443222    223456889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.81  E-value=1e-19  Score=182.93  Aligned_cols=137  Identities=21%  Similarity=0.392  Sum_probs=102.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccC-------CCCcccch
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNH-------KYDAKADL   70 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~-------~ys~ksDI   70 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.......   .....|+..|+|||++...       .++.++|+
T Consensus       116 lH~~~i~H~dlkp~nil~~~~~---~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Di  192 (269)
T cd05087         116 LHKNNFIHSDLALRNCLLTADL---TVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNV  192 (269)
T ss_pred             HHHCCEeccccCcceEEEcCCC---cEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchh
Confidence            3556899999999999998876   799999999976443221   1234577889999998532       35788999


Q ss_pred             hhHHHHHHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCC-CcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           71 WSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPP-GAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        71 WSlGviL~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~-~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      |||||++|+|++ |..||......+............++. ......+..+.+++.+|| .+|.+|||+++|+
T Consensus       193 wslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~  264 (269)
T cd05087         193 WSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVH  264 (269)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHH
Confidence            999999999996 999998776666554444333333332 222245678899999999 6899999999985

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.81  E-value=8.2e-20  Score=181.51  Aligned_cols=135  Identities=23%  Similarity=0.432  Sum_probs=107.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC--ccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~--~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+||+++.++   .+||+|||+++........  ....++..|+|||.+.+..++.++|+||+||++|+
T Consensus       117 H~~~i~h~dl~p~ni~i~~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~e  193 (256)
T cd05112         117 ESSNVIHRDLAARNCLVGENQ---VVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWE  193 (256)
T ss_pred             HHCCccccccccceEEEcCCC---eEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHH
Confidence            556899999999999998766   7999999999865432211  12234567999999988889999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++ |..||......+....+........+    ...+..+.+|+.+||..+|++||++.+++++
T Consensus       194 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         194 VFSEGKTPYENRSNSEVVETINAGFRLYKP----RLASQSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             HHcCCCCCCCcCCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence            998 99999887777666665443222222    2457889999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.81  E-value=1.1e-19  Score=182.20  Aligned_cols=134  Identities=23%  Similarity=0.368  Sum_probs=105.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC----ccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA----DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~----~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..+|+||||||+||+++.++   .+||+|||+++........    .....++.|+|||++....++.++|+|||||++
T Consensus       124 H~~~i~H~dlkp~Nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il  200 (268)
T cd05063         124 SDMNYVHRDLAARNILVNSNL---ECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVM  200 (268)
T ss_pred             HHCCeeccccchhhEEEcCCC---cEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHH
Confidence            456999999999999998766   6999999999866432211    111234569999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++ |..||...+..+....+......  |  .....+..+.+++.+||..+|.+||++.++++
T Consensus       201 ~ell~~g~~p~~~~~~~~~~~~i~~~~~~--~--~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         201 WEVMSFGERPYWDMSNHEVMKAINDGFRL--P--APMDCPSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             HHHHhCCCCCCCcCCHHHHHHHHhcCCCC--C--CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            99997 99999887777766666543222  2  22356789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.81  E-value=8.9e-20  Score=176.96  Aligned_cols=141  Identities=38%  Similarity=0.702  Sum_probs=112.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..+|+|+||+|.||+++.++   .++|+|||++.............++..|++||.+....++.++|+|++|+++|++
T Consensus       103 lh~~~i~h~~i~~~ni~~~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l  179 (244)
T smart00220      103 LHSNGIIHRDLKPENILLDEDG---HVKLADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYEL  179 (244)
T ss_pred             HHHcCeecCCcCHHHeEECCCC---cEEEccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHH
Confidence            3556999999999999999876   7999999999877655445567788999999999888889999999999999999


Q ss_pred             HhCCCCCCC-CcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           81 VTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        81 ltG~~PF~g-~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      ++|..||.. ........ ........... ....++..+.+++.+||..+|.+||++.++++||||
T Consensus       180 ~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      180 LTGKPPFPGDDQLLELFK-KIGKPKPPFPP-PEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             HhCCCCCCCCCcHHHHHH-HHhccCCCCcc-ccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            999999987 44433333 33322222111 111167899999999999999999999999999996

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.81  E-value=1.6e-19  Score=181.09  Aligned_cols=134  Identities=27%  Similarity=0.467  Sum_probs=109.4

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhC
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG   83 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG   83 (568)
                      .+|+|+||||.||+++.++   .+||+|||++.............|+..|++||.+.+..++.++|+||||+++|+|++|
T Consensus       133 ~~i~H~dl~~~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g  209 (269)
T cd08528         133 KRIVHRDLTPNNIMLGEDD---KVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTL  209 (269)
T ss_pred             CceeecCCCHHHEEECCCC---cEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhC
Confidence            4799999999999998876   6999999999876654444556789999999999888899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           84 KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        84 ~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +.||...........+......   +......++.+.+++.+||..||.+||++.|+..+
T Consensus       210 ~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         210 QPPFYSTNMLSLATKIVEAVYE---PLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             CCcccccCHHHHHHHHhhccCC---cCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            9999877766555555433221   11122567899999999999999999999998643

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.80  E-value=1e-19  Score=184.30  Aligned_cols=136  Identities=20%  Similarity=0.340  Sum_probs=101.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC----CccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL----ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~----~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.......    .....++..|++||.+....++.++|||||||+
T Consensus       123 lH~~~i~H~dlkp~Nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~  199 (283)
T cd05080         123 LHSQHYIHRDLAARNVLLDNDR---LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVT  199 (283)
T ss_pred             HHHCCeeccccChheEEEcCCC---cEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHH
Confidence            3557999999999999998876   799999999987643221    122345667999999988889999999999999


Q ss_pred             HHHHHhCCCCCCCCcHH--HH------------HHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           77 LFQLVTGKPPFDGSNQL--QL------------FQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~--~~------------~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|+|++|..||......  +.            +....... ..  ...+...+..+.+++.+||..+|.+||++++++.
T Consensus       200 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         200 LYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERG-MR--LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             HHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcC-CC--CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            99999999998643211  00            00011110 01  1123456789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.80  E-value=1.5e-19  Score=179.36  Aligned_cols=133  Identities=20%  Similarity=0.322  Sum_probs=101.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCC----CCCcEEEeecccceecCCCCCCccccCCCcccChhhhccC--CCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNE----VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH--KYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~----~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~--~ys~ksDIWSlG   74 (568)
                      ||..+|+||||||+|||++.++    ..+.+||+|||+++....   .....++..|+|||++...  .++.++|+||||
T Consensus       117 LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG  193 (259)
T cd05037         117 LEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFG  193 (259)
T ss_pred             HhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHH
Confidence            3567999999999999999765    234699999999987543   2234567789999999776  788999999999


Q ss_pred             HHHHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           75 AILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        75 viL~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |++|+|++ |..||..................  +.    .....+.+++.+||..+|.+||++.++++
T Consensus       194 ~~~~~l~~~~~~p~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         194 TTLLEICSNGEEPLSTLSSSEKERFYQDQHRL--PM----PDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             HHHHHHHhCCCCCcccCCchhHHHHHhcCCCC--CC----CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence            99999999 68888766543333222211111  11    12378999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.80  E-value=2e-19  Score=179.31  Aligned_cols=136  Identities=26%  Similarity=0.517  Sum_probs=106.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++.+.... ......|++.|+|||.+.+..++.++|+||+||++|+
T Consensus       122 lh~~~i~h~dl~p~nil~~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~  198 (267)
T cd08224         122 MHSKRIMHRDIKPANVFITATG---VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYE  198 (267)
T ss_pred             HHhCCEecCCcChhhEEECCCC---cEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHH
Confidence            3567999999999999998876   69999999998754332 2334578899999999988889999999999999999


Q ss_pred             HHhCCCCCCCCc--HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           80 LVTGKPPFDGSN--QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        80 LltG~~PF~g~~--~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |++|+.||....  ..+....+.....   ++......+..+.+++.+||..+|.+||++.++++
T Consensus       199 l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         199 MAALQSPFYGDKMNLYSLCKKIEKCDY---PPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHHCCCCcccCCccHHHHHhhhhcCCC---CCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            999999996543  2233333333222   22122256778999999999999999999999853

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.80  E-value=1.8e-19  Score=184.02  Aligned_cols=139  Identities=21%  Similarity=0.284  Sum_probs=105.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++.......   .....++..|+|||++....++.++|+|||||++
T Consensus       145 lH~~~i~H~dlkp~Nill~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l  221 (295)
T cd05097         145 LASLNFVHRDLATRNCLVGNHY---TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTL  221 (295)
T ss_pred             HHhcCeeccccChhhEEEcCCC---cEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHH
Confidence            4567999999999999998766   699999999976543221   2233456789999999888899999999999999


Q ss_pred             HHHHh--CCCCCCCCcHHHHHHHHHh---ccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT--GKPPFDGSNQLQLFQNILT---STELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt--G~~PF~g~~~~~~~~~Il~---~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++  |..||......+....+..   ..............++.+.+|+.+||..+|.+||+++++++
T Consensus       222 ~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         222 WEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            99988  6788887666555443322   11111111122356789999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.80  E-value=2.1e-19  Score=183.60  Aligned_cols=137  Identities=24%  Similarity=0.362  Sum_probs=103.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.+.....   .....+++.|++||......++.++|+|||||++
T Consensus       146 lH~~~i~H~dlkp~Nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l  222 (296)
T cd05095         146 LSSLNFVHRDLATRNCLVGKNY---TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTL  222 (296)
T ss_pred             HHHCCeecccCChheEEEcCCC---CEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHH
Confidence            3567999999999999998766   699999999986543221   2223446789999998888899999999999999


Q ss_pred             HHHHh--CCCCCCCCcHHHHHHHHHh---cc--CCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT--GKPPFDGSNQLQLFQNILT---ST--ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt--G~~PF~g~~~~~~~~~Il~---~~--~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |||++  |..||......+.......   ..  ....+  .+...++.+.+|+.+||+.||.+||++.++.+
T Consensus       223 ~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         223 WEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLP--KPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCC--CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            99998  7889987665554433211   10  11111  12345688999999999999999999999853

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.80  E-value=1.8e-19  Score=179.51  Aligned_cols=133  Identities=27%  Similarity=0.410  Sum_probs=107.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC--ccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~--~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+|+||||+||+++.++   .+||+|||+++.+......  ....++..|++||.+.+..++.++|+||+||++|+
T Consensus       120 h~~~i~h~di~p~nili~~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~  196 (261)
T cd05034         120 ESRNYIHRDLAARNILVGENL---VCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTE  196 (261)
T ss_pred             HhCCcccCCcchheEEEcCCC---CEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHH
Confidence            556999999999999998876   7999999999876532211  12234567999999988889999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      +++ |+.||.+......+..+........+    ...+..+.+++.+||..+|.+||+++++.
T Consensus       197 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~  255 (261)
T cd05034         197 IVTYGRVPYPGMTNREVLEQVERGYRMPRP----PNCPEELYDLMLQCWDKDPEERPTFEYLQ  255 (261)
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcccCcccCCCHHHHH
Confidence            998 99999988877777766544322222    34578899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.80  E-value=2.5e-19  Score=179.21  Aligned_cols=134  Identities=25%  Similarity=0.386  Sum_probs=107.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++.......  .....++..|+|||++....++.++|+|||||++|
T Consensus       118 lH~~~i~H~dl~p~ni~i~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~  194 (260)
T cd05073         118 IEQRNYIHRDLRAANILVSASL---VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLM  194 (260)
T ss_pred             HHhCCccccccCcceEEEcCCC---cEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHH
Confidence            3567999999999999998766   799999999986643221  12233556799999998888899999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      ++++ |..||.+.+..+....+.......    .....+..+.+++.+||+.+|.+||++.+++
T Consensus       195 ~l~t~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~  254 (260)
T cd05073         195 EIVTYGRIPYPGMSNPEVIRALERGYRMP----RPENCPEELYNIMMRCWKNRPEERPTFEYIQ  254 (260)
T ss_pred             HHHhcCCCCCCCCCHHHHHHHHhCCCCCC----CcccCCHHHHHHHHHHcccCcccCcCHHHHH
Confidence            9998 999999887766666554432222    2246778999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.80  E-value=7.2e-20  Score=190.99  Aligned_cols=145  Identities=30%  Similarity=0.495  Sum_probs=109.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      +|..+|+||||||+||+++.++   .+||+|||+++....  ......+++.|++||++.+ ..++.++|+||+||++|+
T Consensus       124 LH~~~iiH~dl~p~Nili~~~~---~~~l~dfg~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e  198 (328)
T cd07856         124 VHSAGVVHRDLKPSNILINENC---DLKICDFGLARIQDP--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAE  198 (328)
T ss_pred             HHhCCcccCCCCHHHEeECCCC---CEEeCccccccccCC--CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHH
Confidence            3567999999999999998766   699999999875432  2234567889999998765 568899999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhc-----------------------cC--CCCCC-CcccccCHHHHHHHHHhhccCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTS-----------------------TE--LRFPP-GAIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~-----------------------~~--~~~p~-~~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      |++|++||.+.........+...                       ..  ...+. .....++..+.++|.+||+.+|++
T Consensus       199 l~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~  278 (328)
T cd07856         199 MLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQK  278 (328)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhh
Confidence            99999999876643322211110                       00  00010 111245688999999999999999


Q ss_pred             CCCHHHHHhchhHHHhH
Q 008370          134 RITFKEFFNHRFLGELR  150 (568)
Q Consensus       134 RpTaeElL~Hpff~~~~  150 (568)
                      ||++++++.||||....
T Consensus       279 R~t~~ell~~~~~~~~~  295 (328)
T cd07856         279 RISAAEALAHPYLAPYH  295 (328)
T ss_pred             CCCHHHHhcCCcccccc
Confidence            99999999999996554

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.80  E-value=2.3e-20  Score=201.34  Aligned_cols=133  Identities=26%  Similarity=0.466  Sum_probs=116.4

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCC--CcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS--PLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT--~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ..++|||||..+|||+....   .|||+|||++|.+.+...+....|.  ..|||||.+....|+..+|||-|||++||+
T Consensus       509 SkrfVHRDIAaRNiLVsSp~---CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEI  585 (974)
T KOG4257|consen  509 SKRFVHRDIAARNILVSSPQ---CVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEI  585 (974)
T ss_pred             hhchhhhhhhhhheeecCcc---eeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHH
Confidence            35899999999999999887   7999999999999887766555554  359999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           81 VT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        81 lt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +. |..||.|..+.+.+-.|..+.+++.|+    .+++.+..|+.+||.++|.+||.+.++..
T Consensus       586 l~lGvkPfqgvkNsDVI~~iEnGeRlP~P~----nCPp~LYslmskcWayeP~kRPrftei~~  644 (974)
T KOG4257|consen  586 LSLGVKPFQGVKNSDVIGHIENGERLPCPP----NCPPALYSLMSKCWAYEPSKRPRFTEIKA  644 (974)
T ss_pred             HHhcCCccccccccceEEEecCCCCCCCCC----CCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence            87 999999998888877777776666665    67888999999999999999999998754

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.80  E-value=2.1e-19  Score=188.48  Aligned_cols=135  Identities=30%  Similarity=0.471  Sum_probs=104.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++......   ......+++.|+|||++.+..++.++|+|||||++|
T Consensus       196 H~~~i~H~dikp~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  272 (343)
T cd05103         196 ASRKCIHRDLAARNILLSENN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW  272 (343)
T ss_pred             HhCCeecCCCccCeEEEcCCC---cEEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHH
Confidence            556999999999999998776   79999999998653221   112234567799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHh-ccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~-~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+......+...+. ......|    ...++.+.+++.+||+.+|.+||++.++++|
T Consensus       273 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         273 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             HHHHCCCCCCCCccccHHHHHHHhccCCCCCC----CCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            9997 9999987553333333332 2222222    2457889999999999999999999999877

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.80  E-value=2.2e-19  Score=180.66  Aligned_cols=134  Identities=16%  Similarity=0.329  Sum_probs=100.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCC----CCcEEEeecccceecCCCCCCccccCCCcccChhhhc-cCCCCcccchhhHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEV----TPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ-NHKYDAKADLWSVGA   75 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~----~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~-~~~ys~ksDIWSlGv   75 (568)
                      ||..+|+||||||+|||++.++.    .+.+|++|||++......   ....|+..|+|||++. +..++.++|||||||
T Consensus       121 lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~  197 (262)
T cd05077         121 LEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGT  197 (262)
T ss_pred             hhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHH
Confidence            46679999999999999986542    224899999998755322   2356788899999886 467889999999999


Q ss_pred             HHHHHH-hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           76 ILFQLV-TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        76 iL~ELl-tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ++|+|+ .|..||......+... .... .....    .....++.+||.+||..||.+||++.+++++
T Consensus       198 ~l~el~~~~~~p~~~~~~~~~~~-~~~~-~~~~~----~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         198 TLWEICYNGEIPLKDKTLAEKER-FYEG-QCMLV----TPSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             HHHHHHhCCCCCCCCcchhHHHH-HHhc-CccCC----CCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            999997 5888987765443322 2221 11111    1335788999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.80  E-value=1.9e-19  Score=180.05  Aligned_cols=134  Identities=20%  Similarity=0.376  Sum_probs=102.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCC-----CCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEV-----TPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~-----~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlG   74 (568)
                      ||..+|+||||||+||+++.++.     .+.+|++|||++.....   .....+++.|+|||++.+ ..++.++|+||||
T Consensus       116 lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG  192 (258)
T cd05078         116 LEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP---KEILLERIPWVPPECIENPQNLSLAADKWSFG  192 (258)
T ss_pred             HHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCC---chhccccCCccCchhccCCCCCCchhhHHHHH
Confidence            35679999999999999987652     23589999999876543   234568889999999976 4578899999999


Q ss_pred             HHHHHHHhC-CCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           75 AILFQLVTG-KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        75 viL~ELltG-~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++|+|++| ..||.......... +.. ....+|.    ..+.++.+|+.+||+.+|++|||++++++.
T Consensus       193 ~~l~~l~~g~~~~~~~~~~~~~~~-~~~-~~~~~~~----~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         193 TTLWEIFSGGDKPLSALDSQKKLQ-FYE-DRHQLPA----PKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             HHHHHHHcCCCCChhhccHHHHHH-HHH-ccccCCC----CCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence            999999998 56766655544332 222 1222332    345789999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.80  E-value=2.1e-19  Score=180.42  Aligned_cols=135  Identities=22%  Similarity=0.371  Sum_probs=105.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC----ccccC--CCcccChhhhccCCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA----DTLCG--SPLYMAPEIIQNHKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~----~t~~G--T~~YmAPEvl~~~~ys~ksDIWSlG   74 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++........    ....|  +..|++||.+.+..++.++||||+|
T Consensus       122 lH~~g~~H~dl~p~nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG  198 (269)
T cd05065         122 LSEMNYVHRDLAARNILVNSNL---VCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYG  198 (269)
T ss_pred             HHHCCEeecccChheEEEcCCC---cEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhH
Confidence            4567999999999999998766   7999999998765432211    11112  3469999999988999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           75 AILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        75 viL~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |++||+++ |..||...+..+....+......+.    +..++..+.+++.+||..+|.+||++++++.
T Consensus       199 ~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~----~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         199 IVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPP----PMDCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             HHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCC----cccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999886 9999988777666666543322222    2356788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.79  E-value=2.8e-19  Score=180.70  Aligned_cols=133  Identities=26%  Similarity=0.328  Sum_probs=106.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCc---cccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD---TLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~---t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+|+||||||+||+++.++   .+||+|||+++.........   ...++..|++||.+....++.++|+|||||++|
T Consensus       126 H~~~i~H~di~p~nil~~~~~---~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~  202 (279)
T cd05057         126 EEKRLVHRDLAARNVLVKTPQ---HVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVW  202 (279)
T ss_pred             HhCCEEecccCcceEEEcCCC---eEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHH
Confidence            557999999999999998766   69999999998765332211   122356799999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      ++++ |+.||.+....+....+........+    ...+..+.+++.+||..+|.+||++.+++
T Consensus       203 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~  262 (279)
T cd05057         203 ELMTFGAKPYEGIPAVEIPDLLEKGERLPQP----PICTIDVYMVLVKCWMIDAESRPTFKELI  262 (279)
T ss_pred             HHhcCCCCCCCCCCHHHHHHHHhCCCCCCCC----CCCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence            9998 99999988777766666544333322    24567899999999999999999999984

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.79  E-value=2.3e-19  Score=180.07  Aligned_cols=135  Identities=23%  Similarity=0.354  Sum_probs=106.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--C--ccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--A--DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~--~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      +|..+|+||||||+|||++.++   .+||+|||+++.+.....  .  ....++..|++||.+.+..++.++|+|||||+
T Consensus       122 lH~~~i~h~dlkp~nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~  198 (267)
T cd05066         122 LSDMGYVHRDLAARNILVNSNL---VCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV  198 (267)
T ss_pred             HHHCCEeehhhchhcEEECCCC---eEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHH
Confidence            3567999999999999998766   799999999987653221  1  11223567999999988889999999999999


Q ss_pred             HHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           77 LFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        77 L~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|++++ |..||......+....+......  +  .....++.+.+++.+||+.+|.+||++.++++
T Consensus       199 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         199 MWEVMSYGERPYWEMSNQDVIKAIEEGYRL--P--APMDCPAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHHHhcCCCCCcccCCHHHHHHHHhCCCcC--C--CCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence            999886 99999887766666655543222  2  12356789999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.79  E-value=3.5e-19  Score=179.36  Aligned_cols=138  Identities=18%  Similarity=0.376  Sum_probs=104.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhcc-------CCCCcccch
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQN-------HKYDAKADL   70 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~-------~~ys~ksDI   70 (568)
                      ||..+|+||||||+|||++.++   .+||+|||++.......   .....+|+..|+|||++..       ..++.++||
T Consensus       115 lH~~~i~H~dikp~nil~~~~~---~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~Di  191 (268)
T cd05086         115 MHKHNFLHSDLALRNCFLTSDL---TVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNV  191 (268)
T ss_pred             HHHCCeeccCCccceEEEcCCc---cEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchh
Confidence            3556999999999999998776   69999999986532221   1234578889999998743       245778999


Q ss_pred             hhHHHHHHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCC-CCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           71 WSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP-PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        71 WSlGviL~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p-~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |||||++|||++ |..||......+.+..+........+ +......++.+.+++..|| .+|.+||+++++++
T Consensus       192 wslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         192 WALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            999999999997 67899877777776666554333222 2333456788999999999 67999999999853

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.79  E-value=7.2e-20  Score=184.05  Aligned_cols=134  Identities=24%  Similarity=0.481  Sum_probs=105.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+|+|+||+++|||++.++   .+||+|||+++.......   .....+...|+|||.+....++.++||||||+++|
T Consensus       120 h~~~iiH~~l~~~nill~~~~---~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~  196 (259)
T PF07714_consen  120 HSNNIIHGNLSPSNILLDSNG---QVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLY  196 (259)
T ss_dssp             HHTTEEEST-SGGGEEEETTT---EEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            346899999999999999877   799999999988732221   22344667899999999888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+++ |+.||...+..+....+........+    ..++..+.+++.+||..+|.+||++.++++
T Consensus       197 ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  197 EILTLGKFPFSDYDNEEIIEKLKQGQRLPIP----DNCPKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HHHTTSSGTTTTSCHHHHHHHHHTTEETTSB----TTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             cccccccccccccccccccccccccccceec----cchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            9999 78999988888877777555443333    357888999999999999999999999864

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.79  E-value=1.1e-19  Score=198.29  Aligned_cols=138  Identities=25%  Similarity=0.454  Sum_probs=116.5

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccC----CCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCG----SPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~G----T~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ++|||||..+|+|+....   .|||+|||+.|.+..++....+.+    ...|+|||.+...+|+.++|+|+|||++|||
T Consensus       232 rlvHRDLAARNlllaspr---tVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEM  308 (1039)
T KOG0199|consen  232 RLVHRDLAARNLLLASPR---TVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEM  308 (1039)
T ss_pred             hhhhhhhhhhhheecccc---eeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhh
Confidence            799999999999998755   799999999998876554333322    3459999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 lt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++ |..||.|....+++++|-.+..+.-|.    .++.++.++++.||..+|++||||..|.+.-+..+.
T Consensus       309 FtyGEePW~G~~g~qIL~~iD~~erLpRPk----~csedIY~imk~cWah~paDRptFsair~~~~l~ea  374 (1039)
T KOG0199|consen  309 FTYGEEPWVGCRGIQILKNIDAGERLPRPK----YCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEA  374 (1039)
T ss_pred             hccCCCCCCCCCHHHHHHhccccccCCCCC----CChHHHHHHHHHhccCCccccccHHHHHHhHHHHhc
Confidence            99 899999999999999887554554443    568899999999999999999999998766555443

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.79  E-value=2.8e-19  Score=192.53  Aligned_cols=135  Identities=23%  Similarity=0.396  Sum_probs=105.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      +|..+|+||||||+|||++.++   .+||+|||+++.......   .....+++.|+|||++.+..++.++|||||||++
T Consensus       253 LH~~~ivH~dikp~Nill~~~~---~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil  329 (400)
T cd05105         253 LASKNCVHRDLAARNVLLAQGK---IVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILL  329 (400)
T ss_pred             HHhCCeeCCCCChHhEEEeCCC---EEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHH
Confidence            3567999999999999999876   799999999987543221   2234567789999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++ |..||........+...+... ...    ....++..+.+++.+||..+|++||++.++.+
T Consensus       330 ~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         330 WEIFSLGGTPYPGMIVDSTFYNKIKSGYRMA----KPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             HHHHHCCCCCCcccchhHHHHHHHhcCCCCC----CCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            99997 999998765444333333322 222    22467889999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.79  E-value=2.6e-19  Score=202.45  Aligned_cols=133  Identities=29%  Similarity=0.526  Sum_probs=109.6

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCcc--ccCCC--cccChhhhccCCCCcccchhhHHHHHH
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADT--LCGSP--LYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t--~~GT~--~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ..++|||||.++|||+..+.   ++||+|||+||.......+..  ..|+.  .|||||.+....|+.++|||||||+||
T Consensus       436 ~~~~vHRDLAaRNVLi~~~~---~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~  512 (609)
T KOG0200|consen  436 SVPCVHRDLAARNVLITKNK---VIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLW  512 (609)
T ss_pred             hCCccchhhhhhhEEecCCC---EEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHH
Confidence            45899999999999999987   899999999997665554432  22323  499999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCc-HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVT-GKPPFDGSN-QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELlt-G~~PF~g~~-~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+++ |..||.+.. ..+.+..+..+.....|.    ..+.++.++|+.||+.+|++||++.++.+
T Consensus       513 EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~----~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  513 EIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPE----HCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             HHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCC----CCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            9999 999999865 556666566555555443    56889999999999999999999999753

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.78  E-value=4.2e-19  Score=172.94  Aligned_cols=149  Identities=23%  Similarity=0.431  Sum_probs=118.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+|||+||+|++|+....  .++|+|+|+|....+..-++..+.+.+|--||.+.. +.|+...|+|||||++..|
T Consensus       149 HS~GImHRDVKPhNvmIdh~~r--kLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~m  226 (338)
T KOG0668|consen  149 HSMGIMHRDVKPHNVMIDHELR--KLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM  226 (338)
T ss_pred             HhcCcccccCCcceeeechhhc--eeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHH
Confidence            4579999999999999998764  699999999998888777888888999999998864 5789999999999999999


Q ss_pred             HhCCCCCC-CCcHHHHHHHHHhc------------cCCCCCC--------------------CcccccCHHHHHHHHHhh
Q 008370           81 VTGKPPFD-GSNQLQLFQNILTS------------TELRFPP--------------------GAIEELHPDCVDLCRCLL  127 (568)
Q Consensus        81 ltG~~PF~-g~~~~~~~~~Il~~------------~~~~~p~--------------------~~~~~ls~~~~dLI~~cL  127 (568)
                      +..+.||. |.+..+++.+|..-            -...+++                    +...-.++++.||+.++|
T Consensus       227 iFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklL  306 (338)
T KOG0668|consen  227 IFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLL  306 (338)
T ss_pred             HhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHH
Confidence            99888764 66666555554321            0111111                    111223589999999999


Q ss_pred             ccCCCCCCCHHHHHhchhHHHhHHh
Q 008370          128 RQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus       128 ~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      ..|-.+|+|+.|++.||||..++..
T Consensus       307 rYDHqeRlTakEam~HpyF~~~~~~  331 (338)
T KOG0668|consen  307 RYDHQERLTAKEAMAHPYFAPVREA  331 (338)
T ss_pred             hhccccccchHHHhcCchHHHHHHH
Confidence            9999999999999999999877654

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.78  E-value=2.8e-19  Score=180.51  Aligned_cols=144  Identities=26%  Similarity=0.441  Sum_probs=107.0

Q ss_pred             eEecCCCCCCeEEecCC-CCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccC-CCCcccchhhHHHHHHH
Q 008370            6 MIVSANACQNLLVSTNE-VTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQ   79 (568)
Q Consensus         6 IIHrDLKP~NILL~~~~-~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~E   79 (568)
                      |+||||||.|||+..++ .++.|||+|||++|.+...-    ....++-|.+|.|||.+.+. .|+...|+|++|||+.|
T Consensus       153 vlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaE  232 (438)
T KOG0666|consen  153 VLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAE  232 (438)
T ss_pred             eeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHH
Confidence            89999999999998873 24589999999999865321    22345679999999999774 68888999999999999


Q ss_pred             HHhCCCCCCCCc---------HHHHHHHHHhcc----CCCCC------CC----------ccc------------ccCHH
Q 008370           80 LVTGKPPFDGSN---------QLQLFQNILTST----ELRFP------PG----------AIE------------ELHPD  118 (568)
Q Consensus        80 LltG~~PF~g~~---------~~~~~~~Il~~~----~~~~p------~~----------~~~------------~ls~~  118 (568)
                      |++-.+.|.+..         ..+.+.+|..--    ...+|      ..          ...            .-++.
T Consensus       233 lLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~  312 (438)
T KOG0666|consen  233 LLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPS  312 (438)
T ss_pred             HHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCch
Confidence            999999997642         223344443211    00111      00          001            12345


Q ss_pred             HHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370          119 CVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       119 ~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ..+|+.+||..||.+|+|++++++|+||.+-
T Consensus       313 a~~LL~klL~yDP~kRIta~qAleh~yF~~d  343 (438)
T KOG0666|consen  313 ALDLLQKLLTYDPIKRITAEQALEHPYFTED  343 (438)
T ss_pred             HHHHHHHHhccCchhhccHHHHhcccccccC
Confidence            7899999999999999999999999999653

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.78  E-value=4e-19  Score=205.56  Aligned_cols=138  Identities=19%  Similarity=0.261  Sum_probs=104.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-------------------CCCccccCCCcccChhhhcc
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-------------------DLADTLCGSPLYMAPEIIQN   61 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-------------------~~~~t~~GT~~YmAPEvl~~   61 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.....                   ......+||+.|+|||++.+
T Consensus       129 LHs~GIIHRDLKPeNILLd~dg---~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g  205 (932)
T PRK13184        129 VHSKGVLHRDLKPDNILLGLFG---EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG  205 (932)
T ss_pred             HHHCCccccCCchheEEEcCCC---CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC
Confidence            3567999999999999998876   6999999999865210                   01123579999999999999


Q ss_pred             CCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           62 HKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        62 ~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      ..++.++||||+||++|+|++|+.||.+..................  .....+++.+.+++.+||..||++|++..+.+
T Consensus       206 ~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~--~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeL  283 (932)
T PRK13184        206 VPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEV--APYREIPPFLSQIAMKALAVDPAERYSSVQEL  283 (932)
T ss_pred             CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhc--cccccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            9999999999999999999999999987554433222111111111  11236788899999999999999998776655


Q ss_pred             hc
Q 008370          142 NH  143 (568)
Q Consensus       142 ~H  143 (568)
                      .+
T Consensus       284 l~  285 (932)
T PRK13184        284 KQ  285 (932)
T ss_pred             HH
Confidence            44

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.78  E-value=7.5e-19  Score=189.30  Aligned_cols=136  Identities=21%  Similarity=0.355  Sum_probs=107.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++......   ......+++.|+|||.+....++.++|+|||||++
T Consensus       255 LH~~~ivHrdlkp~NiLl~~~~---~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil  331 (401)
T cd05107         255 LASKNCVHRDLAARNVLICEGK---LVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILL  331 (401)
T ss_pred             HhcCCcCcccCCcceEEEeCCC---EEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHH
Confidence            4667999999999999998766   79999999998654322   12234567889999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |||++ |..||......+.....+... ...    .+..++.++.+|+.+||..+|.+||+++++++.
T Consensus       332 ~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~----~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         332 WEIFTLGGTPYPELPMNEQFYNAIKRGYRMA----KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HHHHHcCCCCCCCCCchHHHHHHHHcCCCCC----CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            99998 899998766555544443332 222    223567899999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.78  E-value=6.1e-19  Score=178.88  Aligned_cols=137  Identities=23%  Similarity=0.389  Sum_probs=101.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++.+....    ......|+..|+|||++.+..++.++|||||||+
T Consensus       125 lH~~gi~H~dlkp~Nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~i  201 (284)
T cd05079         125 LGSRQYVHRDLAARNVLVESEH---QVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVT  201 (284)
T ss_pred             HHHCCeeecccchheEEEcCCC---CEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhh
Confidence            3556999999999999998776   69999999998764332    1234556778999999988889999999999999


Q ss_pred             HHHHHhCCCCCCCC--------------cHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           77 LFQLVTGKPPFDGS--------------NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        77 L~ELltG~~PF~g~--------------~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|+|++++.|+...              .............. ..  ..+..++..+.+|+.+||+.+|.+||++.++++
T Consensus       202 l~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  278 (284)
T cd05079         202 LYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK-RL--PRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE  278 (284)
T ss_pred             hhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc-cC--CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            99999987664321              11111111111111 11  123457889999999999999999999999975


Q ss_pred             c
Q 008370          143 H  143 (568)
Q Consensus       143 H  143 (568)
                      +
T Consensus       279 ~  279 (284)
T cd05079         279 G  279 (284)
T ss_pred             H
Confidence            4

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.78  E-value=7.6e-19  Score=178.08  Aligned_cols=134  Identities=19%  Similarity=0.340  Sum_probs=101.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCC----CCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEV----TPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGA   75 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~----~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGv   75 (568)
                      ||..+|+||||||+|||++..+.    .+.+|++|||++......   ....++..|+|||.+.+ ..++.++|+|||||
T Consensus       133 lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~  209 (274)
T cd05076         133 LEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGT  209 (274)
T ss_pred             HHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHH
Confidence            46679999999999999986532    235899999998654321   23457888999998865 56889999999999


Q ss_pred             HHHHHH-hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           76 ILFQLV-TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        76 iL~ELl-tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ++||++ +|..||.+....+....+. . ....+    ....+.+.++|.+||..+|.+||++.+++++
T Consensus       210 ~l~el~~~g~~p~~~~~~~~~~~~~~-~-~~~~~----~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         210 TLLEICFDGEVPLKERTPSEKERFYE-K-KHRLP----EPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             HHHHHHhCCCCCccccChHHHHHHHH-h-ccCCC----CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            999985 6999998766544433222 1 12222    2345789999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.78  E-value=1.4e-19  Score=199.59  Aligned_cols=136  Identities=25%  Similarity=0.421  Sum_probs=116.0

Q ss_pred             CCC---CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCC--CcccChhhhccCCCCcccchhhH
Q 008370            1 MCY---VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGS--PLYMAPEIIQNHKYDAKADLWSV   73 (568)
Q Consensus         1 m~~---~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT--~~YmAPEvl~~~~ys~ksDIWSl   73 (568)
                      |+|   +++|||||.++|||++.+-   ++|++|||++|.+.++.  .+.+..|.  ..|.|||.+...+|+..+|||||
T Consensus       744 MkYLsdm~YVHRDLAARNILVNsnL---vCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSy  820 (996)
T KOG0196|consen  744 MKYLSDMNYVHRDLAARNILVNSNL---VCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSY  820 (996)
T ss_pred             hHHHhhcCchhhhhhhhheeeccce---EEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhcccc
Confidence            555   4999999999999999876   89999999999876543  33444443  46999999999999999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           74 GAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        74 GviL~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+++||.++ |..||-...+.+.+..|..+..++.|.    +++..+.+||..||++|-.+||+|.+++.+
T Consensus       821 GIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPm----DCP~aL~qLMldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  821 GIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPM----DCPAALYQLMLDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             ceEEEEecccCCCcccccchHHHHHHHHhccCCCCCC----CCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence            999999776 999999999999999998765554443    668889999999999999999999999765

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.77  E-value=1.2e-18  Score=175.26  Aligned_cols=137  Identities=21%  Similarity=0.400  Sum_probs=107.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..+|+||||||+||+++.++   .+||+|||+++......  ......++..|++||.+.+..++.++||||||+++|
T Consensus       133 LH~~~i~H~dlkp~Nili~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~  209 (275)
T cd05046         133 LSNARFVHRDLAARNCLVSSQR---EVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMW  209 (275)
T ss_pred             hhhcCcccCcCccceEEEeCCC---cEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHH
Confidence            4667999999999999998876   69999999987543222  223345677899999998888889999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+.........+... ...++  ....++..+.+++.+||..+|.+||++.+++.+
T Consensus       210 ~l~~~~~~p~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         210 EVFTQGELPFYGLSDEEVLNRLQAG-KLELP--VPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             HHHhCCCCCccccchHHHHHHHHcC-CcCCC--CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            9998 88999876666555544322 22222  223567899999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.77  E-value=3.3e-19  Score=186.25  Aligned_cols=143  Identities=26%  Similarity=0.436  Sum_probs=118.8

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--------CCccccCCCcccChhhhccC----CCCcccch
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--------LADTLCGSPLYMAPEIIQNH----KYDAKADL   70 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--------~~~t~~GT~~YmAPEvl~~~----~ys~ksDI   70 (568)
                      .++|||-||||-|||+......+.|||+|||+++.+..+.        ++....||.+|++||.+.-.    +.+.++||
T Consensus       588 kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDV  667 (775)
T KOG1151|consen  588 KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDV  667 (775)
T ss_pred             CCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceee
Confidence            3689999999999999887767789999999999886442        44567899999999987533    56789999


Q ss_pred             hhHHHHHHHHHhCCCCCCCCcH-HHH--HHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370           71 WSVGAILFQLVTGKPPFDGSNQ-LQL--FQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus        71 WSlGviL~ELltG~~PF~g~~~-~~~--~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                      ||+|||+|+.+.|+.||...-. .++  ...|+......||+..  .+++++++||++||++.-++|....++..||||.
T Consensus       668 WSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KP--vVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyll  745 (775)
T KOG1151|consen  668 WSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKP--VVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLL  745 (775)
T ss_pred             EeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCC--ccCHHHHHHHHHHHHhhhhhhhhHHHHccCcccc
Confidence            9999999999999999975432 222  2346666677788653  6789999999999999999999999999999984

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.77  E-value=2.5e-19  Score=176.33  Aligned_cols=134  Identities=20%  Similarity=0.306  Sum_probs=99.7

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC----------CccccCCCcccChhhhcc---CCCCcccchh
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL----------ADTLCGSPLYMAPEIIQN---HKYDAKADLW   71 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~----------~~t~~GT~~YmAPEvl~~---~~ys~ksDIW   71 (568)
                      .++||||||.|||++.++   .++|.|||.+......-.          ......|..|+|||.+..   ...+.++|||
T Consensus       149 ~yAH~DiKP~NILls~~~---~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIW  225 (302)
T KOG2345|consen  149 PYAHRDIKPANILLSDSG---LPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIW  225 (302)
T ss_pred             cccccCCCcceeEecCCC---ceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchh
Confidence            499999999999999866   799999999876432110          112245888999999854   4567899999


Q ss_pred             hHHHHHHHHHhCCCCCCCCcHHH-HHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           72 SVGAILFQLVTGKPPFDGSNQLQ-LFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        72 SlGviL~ELltG~~PF~g~~~~~-~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ||||+||.|+.|..||....... -+...+....+.+|...  ..++.+.++++.||+.||.+||++.+++.+
T Consensus       226 SLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~--~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  226 SLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSS--RYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             hhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCC--CccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            99999999999999996322100 01111223345556543  478999999999999999999999998754

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.77  E-value=4.5e-19  Score=167.23  Aligned_cols=143  Identities=26%  Similarity=0.448  Sum_probs=114.3

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccC-CCCcccchhhHHHHHHHH
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQL   80 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~EL   80 (568)
                      ...+.||||||+|+||+.++   .+|++|||+++-++..- ++...+-|.+|.+|.++.+. -|++..|+||.||++.|+
T Consensus       119 shnvlhrdlkpqnllin~ng---elkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifael  195 (292)
T KOG0662|consen  119 SHNVLHRDLKPQNLLINRNG---ELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAEL  195 (292)
T ss_pred             hhhhhhccCCcceEEeccCC---cEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHH
Confidence            45789999999999999988   79999999999876443 55566779999999998764 588999999999999999


Q ss_pred             Hh-CCCCCCCCcHHHHHHHHHhccCC----CCC------CC--------------cccccCHHHHHHHHHhhccCCCCCC
Q 008370           81 VT-GKPPFDGSNQLQLFQNILTSTEL----RFP------PG--------------AIEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        81 lt-G~~PF~g~~~~~~~~~Il~~~~~----~~p------~~--------------~~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      .. |++.|+|.+..+.+.+|...-..    .+|      ..              ....+...-++|++++|.-+|.+|+
T Consensus       196 anagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qri  275 (292)
T KOG0662|consen  196 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRI  275 (292)
T ss_pred             hhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCccccc
Confidence            87 88999999888887777542110    111      00              0122344568999999999999999


Q ss_pred             CHHHHHhchhHHH
Q 008370          136 TFKEFFNHRFLGE  148 (568)
Q Consensus       136 TaeElL~Hpff~~  148 (568)
                      ++++.++||||..
T Consensus       276 saeaalqhpyf~d  288 (292)
T KOG0662|consen  276 SAEAALQHPYFSD  288 (292)
T ss_pred             CHHHHhcCccccc
Confidence            9999999999964

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.76  E-value=9.3e-19  Score=188.64  Aligned_cols=128  Identities=27%  Similarity=0.511  Sum_probs=109.7

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccC---CCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCG---SPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~G---T~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      .+|||||..+|+|+.++.   +|||+|||++|.+..+..+ ...|   ...|.|||.+.+..|+.|+|||+|||+|||+.
T Consensus       385 nFIHRDLAARNCLVgEnh---iVKvADFGLsRlMtgDTYT-AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIA  460 (1157)
T KOG4278|consen  385 NFIHRDLAARNCLVGENH---IVKVADFGLSRLMTGDTYT-AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIA  460 (1157)
T ss_pred             hhhhhhhhhhhccccccc---eEEeeccchhhhhcCCcee-cccCccCcccccCcccccccccccchhhHHHHHHHHHHH
Confidence            799999999999999987   8999999999998765433 2333   34599999999999999999999999999998


Q ss_pred             h-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHH
Q 008370           82 T-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF  140 (568)
Q Consensus        82 t-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeEl  140 (568)
                      | |-.||.|.+..+.+..+.++..+.-|.    .+++.+.+||+.||+++|.+||++.|+
T Consensus       461 TYGMsPYPGidlSqVY~LLEkgyRM~~Pe----GCPpkVYeLMraCW~WsPsDRPsFaei  516 (1157)
T KOG4278|consen  461 TYGMSPYPGIDLSQVYGLLEKGYRMDGPE----GCPPKVYELMRACWNWSPSDRPSFAEI  516 (1157)
T ss_pred             hcCCCCCCCccHHHHHHHHhccccccCCC----CCCHHHHHHHHHHhcCCcccCccHHHH
Confidence            8 999999999888877665555555444    678889999999999999999999997

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.76  E-value=1.1e-18  Score=176.54  Aligned_cols=136  Identities=22%  Similarity=0.356  Sum_probs=99.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC----CccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL----ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~----~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      ||..||+||||||+||+++.++   .+||+|||+++.......    .....++..|+|||++.+..++.++|+|||||+
T Consensus       124 LH~~~i~H~dlkp~nili~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~  200 (284)
T cd05081         124 LGSKRYVHRDLATRNILVESEN---RVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVV  200 (284)
T ss_pred             HHHCCceeccCCHhhEEECCCC---eEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHH
Confidence            3567999999999999998876   699999999987643321    111233456999999988889999999999999


Q ss_pred             HHHHHhCCCCCCCCcHH---------------HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           77 LFQLVTGKPPFDGSNQL---------------QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~---------------~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      +|||++|..++......               ..+..++... ..++  ....++..+.+|+.+||..+|++|||+.+++
T Consensus       201 l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~  277 (284)
T cd05081         201 LYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNN-GRLP--APPGCPAEIYAIMKECWNNDPSQRPSFSELA  277 (284)
T ss_pred             HHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcC-CcCC--CCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            99999987765432211               0011111111 1111  2245678999999999999999999999986


Q ss_pred             h
Q 008370          142 N  142 (568)
Q Consensus       142 ~  142 (568)
                      +
T Consensus       278 ~  278 (284)
T cd05081         278 L  278 (284)
T ss_pred             H
Confidence            5

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.75  E-value=2e-18  Score=190.45  Aligned_cols=142  Identities=20%  Similarity=0.312  Sum_probs=101.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccc--cCCCcccChhhhccCC---------------
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTL--CGSPLYMAPEIIQNHK---------------   63 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~--~GT~~YmAPEvl~~~~---------------   63 (568)
                      ||..+|+||||||+|||++.++   .+||+|||+++.+.........  .+++.|+|||.+....               
T Consensus       325 lH~~~ivHrDLKp~NILl~~~~---~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~  401 (507)
T PLN03224        325 LHRIGIVHRDIKPENLLVTVDG---QVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLS  401 (507)
T ss_pred             HHHCCeecCCCchHhEEECCCC---cEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhh
Confidence            3567999999999999999876   6999999999765433322222  3478999999875321               


Q ss_pred             -----CC--cccchhhHHHHHHHHHhCCC-CCCCCcHHHH----H----H--HHHhccCCCCCCCcccccCHHHHHHHHH
Q 008370           64 -----YD--AKADLWSVGAILFQLVTGKP-PFDGSNQLQL----F----Q--NILTSTELRFPPGAIEELHPDCVDLCRC  125 (568)
Q Consensus        64 -----ys--~ksDIWSlGviL~ELltG~~-PF~g~~~~~~----~----~--~Il~~~~~~~p~~~~~~ls~~~~dLI~~  125 (568)
                           |+  .+.|+||+||++|+|++|.. ||.+......    +    .  +........++  .+...++.+++|+.+
T Consensus       402 ~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~--~~d~~s~~~~dLi~~  479 (507)
T PLN03224        402 PFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFS--LLDRNKEAGWDLACK  479 (507)
T ss_pred             hhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcc--cccccChHHHHHHHH
Confidence                 22  34799999999999999875 7754221110    0    0  01111222232  345678999999999


Q ss_pred             hhccCC---CCCCCHHHHHhchhHH
Q 008370          126 LLRQNP---VERITFKEFFNHRFLG  147 (568)
Q Consensus       126 cL~~dP---~~RpTaeElL~Hpff~  147 (568)
                      ||..+|   .+|+|++|+|+||||.
T Consensus       480 LL~~~~~~~~~RlSa~eaL~Hp~f~  504 (507)
T PLN03224        480 LITKRDQANRGRLSVGQALSHRFFL  504 (507)
T ss_pred             HhccCCCCcccCCCHHHHhCCCCcC
Confidence            999866   6899999999999994

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=1.9e-18  Score=183.63  Aligned_cols=137  Identities=26%  Similarity=0.396  Sum_probs=99.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccc-cCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTL-CGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~-~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |.+.|||||||+.||||+.+.   ..||+|||+|+.... .....+. .||..|++||++..+..+.++|||||||++.|
T Consensus       194 ~~~~iiHrDiKssNILLD~~~---~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllE  270 (361)
T KOG1187|consen  194 CPPPIIHRDIKSSNILLDEDF---NAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLE  270 (361)
T ss_pred             CCCCEecCCCCHHHeeECCCC---CEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHH
Confidence            445799999999999999887   699999999977654 3333333 89999999999988889999999999999999


Q ss_pred             HHhCCCCCCCCc------HHHHHHHHHhcc------CCCCCCCccc--ccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           80 LVTGKPPFDGSN------QLQLFQNILTST------ELRFPPGAIE--ELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        80 LltG~~PF~g~~------~~~~~~~Il~~~------~~~~p~~~~~--~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      +++|+.+.....      ..+.....+...      ...+......  ..-..+..+..+|++.+|.+||++.||+
T Consensus       271 litgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv  346 (361)
T KOG1187|consen  271 LITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVV  346 (361)
T ss_pred             HHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHH
Confidence            999998887432      112111122211      1111101111  1223466778899999999999999973

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.75  E-value=2e-18  Score=173.63  Aligned_cols=136  Identities=24%  Similarity=0.403  Sum_probs=101.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC----CccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL----ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~----~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      ||..||+||||||+||+++.++   .+||+|||++........    .....++..|++||.+....++.++|+|||||+
T Consensus       125 lH~~~i~H~dl~p~nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~  201 (284)
T cd05038         125 LGSQRYIHRDLAARNILVESED---LVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVT  201 (284)
T ss_pred             HHhCCeecCCCCHHhEEEcCCC---CEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhh
Confidence            4667999999999999999876   799999999987653221    112234556999999988889999999999999


Q ss_pred             HHHHHhCCCCCCCCcHH--------------HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           77 LFQLVTGKPPFDGSNQL--------------QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~--------------~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|+|++|..||......              ......+... ...+  .....+..+.+++.+||..+|.+||++.|+++
T Consensus       202 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         202 LYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG-ERLP--RPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             hheeeccCCCcccccchhccccccccccccHHHHHHHHHcC-CcCC--CCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            99999999998653211              1112222221 1111  12345678999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.75  E-value=7.6e-19  Score=174.60  Aligned_cols=148  Identities=30%  Similarity=0.464  Sum_probs=113.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhcc-CCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~   78 (568)
                      |..+|.||||||-|+|++.+.   ++||||||+||....++  .....+-|.+|.|||++.+ ..|+..+||||+|||+.
T Consensus       173 HsA~ILHRDIKPGNLLVNSNC---vLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFa  249 (449)
T KOG0664|consen  173 HTANILHRDIKPGNLLVNSNC---ILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFA  249 (449)
T ss_pred             hhcchhhccCCCccEEeccCc---eEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHH
Confidence            456999999999999999988   89999999999765433  2333456889999999976 47899999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhcc---------------------CCCCCCCc--------ccccCHHHHHHHHHhhcc
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTST---------------------ELRFPPGA--------IEELHPDCVDLCRCLLRQ  129 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~---------------------~~~~p~~~--------~~~ls~~~~dLI~~cL~~  129 (568)
                      |++-.+..|...++.+.+..|..--                     ...-++..        ......+..+++.++|..
T Consensus       250 ELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~  329 (449)
T KOG0664|consen  250 ELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHF  329 (449)
T ss_pred             HHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCC
Confidence            9999999999888777766554210                     00011111        112234677888899999


Q ss_pred             CCCCCCCHHHHHhchhHHHhHHh
Q 008370          130 NPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus       130 dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      ||.+|.+.++.+.|++..+.+-.
T Consensus       330 d~dkris~~~A~~~~~~~e~R~r  352 (449)
T KOG0664|consen  330 DPDKRISVEEALQHRYLEEGRLR  352 (449)
T ss_pred             CCcccccHhhhccccccccccee
Confidence            99999999999999999776643

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.74  E-value=1.3e-18  Score=194.45  Aligned_cols=142  Identities=25%  Similarity=0.431  Sum_probs=119.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-----CCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-----HKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-----~~ys~ksDIWSlGv   75 (568)
                      |...+||||||-+|||++.++   .|||+|||++..++.. ....+.+|||+|||||++..     ..|+..+|+||||+
T Consensus       140 H~nkviHRDikG~NiLLT~e~---~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGI  216 (953)
T KOG0587|consen  140 HNNKVIHRDIKGQNVLLTENA---EVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGI  216 (953)
T ss_pred             hhcceeeecccCceEEEeccC---cEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccc
Confidence            556899999999999999988   6999999999887643 45678999999999999853     35788899999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      +..||.-|.+|+..+.+...+..|-.+..+.+.  .+...+..+.+||..||.+|-.+||+..++++|||+.+
T Consensus       217 TaIEladG~PPl~DmHPmraLF~IpRNPPPkLk--rp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e  287 (953)
T KOG0587|consen  217 TAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLK--RPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE  287 (953)
T ss_pred             eeehhcCCCCCccCcchhhhhccCCCCCCcccc--chhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence            999999999999998887766655444322222  23466788999999999999999999999999999864

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.74  E-value=1.7e-18  Score=166.57  Aligned_cols=103  Identities=24%  Similarity=0.463  Sum_probs=86.1

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc----cCCCCcccchhhHHHHHHH
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ----NHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~----~~~ys~ksDIWSlGviL~E   79 (568)
                      +.+||||+||.||||+.++   +|||||||++..+.+.-......|...|||||.+.    ...|+-++||||||+.++|
T Consensus       168 L~vIHRDvKPsNiLIn~~G---qVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiE  244 (282)
T KOG0984|consen  168 LSVIHRDVKPSNILINYDG---QVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIE  244 (282)
T ss_pred             hhhhhccCCcceEEEccCC---cEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhh
Confidence            4799999999999999988   79999999998876544333367888999999874    3479999999999999999


Q ss_pred             HHhCCCCCCC-CcHHHHHHHHHhccCCCCCC
Q 008370           80 LVTGKPPFDG-SNQLQLFQNILTSTELRFPP  109 (568)
Q Consensus        80 LltG~~PF~g-~~~~~~~~~Il~~~~~~~p~  109 (568)
                      |.+++.||.. ..+.+++.+++....+.+|.
T Consensus       245 lA~lr~PY~~w~tpF~qLkqvVeep~P~Lp~  275 (282)
T KOG0984|consen  245 MAILRFPYESWGTPFQQLKQVVEEPSPQLPA  275 (282)
T ss_pred             hhhccccccccCCHHHHHHHHhcCCCCCCcc
Confidence            9999999974 56888888888776555554

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.74  E-value=1e-18  Score=189.21  Aligned_cols=134  Identities=22%  Similarity=0.402  Sum_probs=110.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCcccc-CCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLC-GSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~-GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..++|||||..+|+|++.++   ++||+|||+++...........+ -...|+|||.+....|+.++|||||||++||
T Consensus       278 Lh~k~~IHRDIAARNcL~~~~~---~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~E  354 (474)
T KOG0194|consen  278 LHSKNCIHRDIAARNCLYSKKG---VVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWE  354 (474)
T ss_pred             HHHCCCcchhHhHHHheecCCC---eEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEe
Confidence            4567899999999999999887   68999999988654222222222 3456999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhc-cCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTS-TELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~-~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      +++ |..||.+....+...+|... ...+.|.    ..+.....++.+||..+|++||++.++.
T Consensus       355 if~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~----~~p~~~~~~~~~c~~~~p~~R~tm~~i~  414 (474)
T KOG0194|consen  355 IFENGAEPYPGMKNYEVKAKIVKNGYRMPIPS----KTPKELAKVMKQCWKKDPEDRPTMSTIK  414 (474)
T ss_pred             eeccCCCCCCCCCHHHHHHHHHhcCccCCCCC----CCHHHHHHHHHHhccCChhhccCHHHHH
Confidence            999 89999999999999988554 3444333    5677888999999999999999999984

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.72  E-value=9.6e-18  Score=190.62  Aligned_cols=147  Identities=30%  Similarity=0.546  Sum_probs=126.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC----------------CCCccccCCCcccChhhhccCCC
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ----------------DLADTLCGSPLYMAPEIIQNHKY   64 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~----------------~~~~t~~GT~~YmAPEvl~~~~y   64 (568)
                      +|+.||+|||+||+|.||+.-+   ++|++|||+.+.....                -..+.+||||.|.|||++..++|
T Consensus       159 lh~ygivhrdlkpdnllIT~mG---hiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgy  235 (1205)
T KOG0606|consen  159 LHSYGIVHRDLKPDNLLITSMG---HIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGY  235 (1205)
T ss_pred             hccCCeecCCCCCCcceeeecc---cccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhcc
Confidence            4788999999999999999877   8999999998753210                02245799999999999999999


Q ss_pred             CcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC---CHHHHH
Q 008370           65 DAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI---TFKEFF  141 (568)
Q Consensus        65 s~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp---TaeElL  141 (568)
                      +..+|+|++|+|+||++.|+.||.|+.+.+++..++.. ...+|+. ...+++++.++|.++|+.+|.+|.   .+-++.
T Consensus       236 gkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd-~i~wpE~-dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk  313 (1205)
T KOG0606|consen  236 GKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISD-DIEWPEE-DEALPPEAQDLIEQLLRQNPLCRLGTGGALEVK  313 (1205)
T ss_pred             CCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhh-hcccccc-CcCCCHHHHHHHHHHHHhChHhhcccchhhhhh
Confidence            99999999999999999999999999999998877654 5556655 567889999999999999999996   466899


Q ss_pred             hchhHHHhHHh
Q 008370          142 NHRFLGELRQT  152 (568)
Q Consensus       142 ~Hpff~~~~~~  152 (568)
                      +|+||..+.|.
T Consensus       314 ~h~ff~~LDw~  324 (1205)
T KOG0606|consen  314 QHGFFQLLDWK  324 (1205)
T ss_pred             hccceeecccc
Confidence            99999988876

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.68  E-value=3.4e-17  Score=180.04  Aligned_cols=86  Identities=33%  Similarity=0.561  Sum_probs=78.0

Q ss_pred             CCeEecCCCCCCeEEecCC-CCCcEEEeecccceecCCCCCCccccCCCcccChhhhc-cCCCCcccchhhHHHHHHHHH
Q 008370            4 VFMIVSANACQNLLVSTNE-VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ-NHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~-~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~-~~~ys~ksDIWSlGviL~ELl   81 (568)
                      -|||||||||.||++-... .....||+|||.||.+.++....+++||+.|.+||++. ...|+..+|.|||||++|+.+
T Consensus       139 n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~ca  218 (732)
T KOG4250|consen  139 NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECA  218 (732)
T ss_pred             cCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHh
Confidence            4899999999999997655 34467999999999999999999999999999999998 588999999999999999999


Q ss_pred             hCCCCCCC
Q 008370           82 TGKPPFDG   89 (568)
Q Consensus        82 tG~~PF~g   89 (568)
                      ||..||-.
T Consensus       219 TG~lPF~p  226 (732)
T KOG4250|consen  219 TGELPFIP  226 (732)
T ss_pred             ccCCCCCc
Confidence            99999953

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.68  E-value=7.3e-17  Score=167.09  Aligned_cols=134  Identities=23%  Similarity=0.375  Sum_probs=113.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC--c-cccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA--D-TLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~--~-t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..|+||.||..+|++|++.-   .+||+|=.++|.+-+.+..  + ..-....||+||.+....|+..+|+|||||++|
T Consensus       413 h~~~ViHkDiAaRNCvIdd~L---qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllW  489 (563)
T KOG1024|consen  413 HNHGVIHKDIAARNCVIDDQL---QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLW  489 (563)
T ss_pred             HhcCcccchhhhhcceehhhe---eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHH
Confidence            567999999999999998764   7999999999976544321  1 112244699999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ||+| |+.||...++.++...+..+.+...|.    +++.++..+|..||...|++||+++|+..
T Consensus       490 ELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP~----NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  490 ELMTLGKLPYAEIDPFEMEHYLKDGYRLAQPF----NCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             HHHhcCCCCccccCHHHHHHHHhccceecCCC----CCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            9999 999999999999988888776666554    66788999999999999999999999853

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.67  E-value=5e-17  Score=174.97  Aligned_cols=140  Identities=23%  Similarity=0.314  Sum_probs=109.0

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCc---cccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD---TLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~---t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ..||||||.++|||++.+.   ++||+|||++|.+.....+.   ..+-...|||+|.+..++|++++|+|+||+++||+
T Consensus       656 ~nfVHrd~a~rNcLv~~e~---~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~  732 (807)
T KOG1094|consen  656 LNFVHRDLATRNCLVDGEF---TIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEV  732 (807)
T ss_pred             hchhhccccccceeecCcc---cEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHH
Confidence            4899999999999999887   79999999999876555433   23345679999999999999999999999999998


Q ss_pred             Hh--CCCCCCCCcHHHHHHHHHh---ccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           81 VT--GKPPFDGSNQLQLFQNILT---STELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        81 lt--G~~PF~g~~~~~~~~~Il~---~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ++  ...||......+...+...   ......-...+.-++..+.++|.+||..+-.+||+++++  |.+|++
T Consensus       733 ~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~l--h~~lq~  803 (807)
T KOG1094|consen  733 FMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQL--HLFLQE  803 (807)
T ss_pred             HHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHH--HHHHHH
Confidence            66  7899988877766654432   111111112234567788999999999999999999998  555543

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.64  E-value=4.9e-16  Score=177.80  Aligned_cols=140  Identities=26%  Similarity=0.479  Sum_probs=110.5

Q ss_pred             EecCCCCCC-eEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHh
Q 008370            7 IVSANACQN-LLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT   82 (568)
Q Consensus         7 IHrDLKP~N-ILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELlt   82 (568)
                      .|++.+|.| +++...+   .+++.|||.++......   .....+||+.|||||++.+..|+.++|||||||++|||++
T Consensus       499 ~~~~~~p~~~~~~~p~~---~~~~~~~~~~~~~~~g~~~~~~~~~vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~Ellt  575 (669)
T cd05610         499 PTQKPRPHGNLYQTPKQ---VKIGTPYRTPKSVRRGAAPVEGERILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLT  575 (669)
T ss_pred             CCCCCCCCCceeECCcc---ccccccCCCchhhhcccccccCCceeeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHH
Confidence            356666664 4444333   57899999987654322   2345689999999999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           83 GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        83 G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      |++||.+....+.+..++.. ...++.. ...++..+.+++.+||..||.+||++.++++||||..+.+
T Consensus       576 G~~pf~~~~~~~~~~~il~~-~~~~p~~-~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~~~~~~  642 (669)
T cd05610         576 GIPPFNDETPQQVFQNILNR-DIPWPEG-EEKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFHGVDW  642 (669)
T ss_pred             CCCCCCCCCHHHHHHHHHhc-CCCCCcc-cccCCHHHHHHHHHHcccChhHCcCHHHHHhCHhhcCCCH
Confidence            99999998888888777654 2333332 2367788999999999999999999999999999976644

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.63  E-value=7.2e-17  Score=181.60  Aligned_cols=148  Identities=24%  Similarity=0.399  Sum_probs=116.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-----CCCccccCCCcccChhhhccCCCCcc-cchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-----DLADTLCGSPLYMAPEIIQNHKYDAK-ADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-----~~~~t~~GT~~YmAPEvl~~~~ys~k-sDIWSlG   74 (568)
                      ||..||.|||||++|+++..++   .+||+|||.+..+...     ......+|+..|+|||++.+..|++. +||||.|
T Consensus       436 ~h~~GiahrdlK~enll~~~~g---~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~  512 (601)
T KOG0590|consen  436 LHSMGLAHRDLKLENLLVTENG---ILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCG  512 (601)
T ss_pred             HHhcCceeccCccccEEEecCC---ceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhcc
Confidence            4667999999999999999987   7999999998765321     23456789999999999999999876 8999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHH-HHHHhcc---CCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           75 AILFQLVTGKPPFDGSNQLQLF-QNILTST---ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~-~~Il~~~---~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +++..|.+|+.||......+.. .......   ...-+...+..++...+.+|.+||+.+|.+|.|++++++.+||+.+.
T Consensus       513 ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  513 IIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             ceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence            9999999999999755433221 1111111   11112234456778899999999999999999999999999998875


Q ss_pred             H
Q 008370          151 Q  151 (568)
Q Consensus       151 ~  151 (568)
                      .
T Consensus       593 ~  593 (601)
T KOG0590|consen  593 C  593 (601)
T ss_pred             e
Confidence            4

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.61  E-value=8.4e-16  Score=170.64  Aligned_cols=131  Identities=28%  Similarity=0.406  Sum_probs=109.7

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCcc-c--cCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADT-L--CGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t-~--~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      ++|||||..+|+|+..-+   ++||+|||+++.+..+..... .  .-.+.|||-|.+....|+.++|||||||++||++
T Consensus       818 rlVHrdLaaRNVLVksP~---hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElm  894 (1177)
T KOG1025|consen  818 RLVHRDLAARNVLVKSPN---HVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELM  894 (1177)
T ss_pred             chhhhhhhhhheeecCCC---eEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHH
Confidence            799999999999999877   899999999998876553222 2  2245699999999999999999999999999999


Q ss_pred             h-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           82 T-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        82 t-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      | |..|+.+....++-..+..+.++..|+    ..+-+++-+|.+||..|+..||+|+++..
T Consensus       895 TFGa~Py~gi~~~eI~dlle~geRLsqPp----iCtiDVy~~mvkCwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  895 TFGAKPYDGIPAEEIPDLLEKGERLSQPP----ICTIDVYMVMVKCWMIDADSRPTFKELAE  952 (1177)
T ss_pred             hcCCCccCCCCHHHhhHHHhccccCCCCC----CccHHHHHHHHHHhccCcccCccHHHHHH
Confidence            9 999999988877766555555554444    56788999999999999999999998743

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.61  E-value=4.8e-16  Score=162.66  Aligned_cols=149  Identities=24%  Similarity=0.327  Sum_probs=102.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-----------------C-C----------------CCC---
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-----------------P-Q----------------DLA---   44 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-----------------~-~----------------~~~---   44 (568)
                      |..|||||||||.|+|.+....  .-.|+|||+|....                 . .                ..+   
T Consensus       149 h~~GIvHRDiKpsNFL~n~~t~--rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~  226 (418)
T KOG1167|consen  149 HKNGIVHRDIKPSNFLYNRRTQ--RGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRC  226 (418)
T ss_pred             hccCccccCCCccccccccccC--CceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceecc
Confidence            4469999999999999987654  45799999986210                 0 0                000   


Q ss_pred             --------ccccCCCcccChhhhc-cCCCCcccchhhHHHHHHHHHhCCCCCCCCc-HHHHHHHHHh-------------
Q 008370           45 --------DTLCGSPLYMAPEIIQ-NHKYDAKADLWSVGAILFQLVTGKPPFDGSN-QLQLFQNILT-------------  101 (568)
Q Consensus        45 --------~t~~GT~~YmAPEvl~-~~~ys~ksDIWSlGviL~ELltG~~PF~g~~-~~~~~~~Il~-------------  101 (568)
                              -...||++|.|||++. ....++++||||.|||+..+++++.||.... ..+.+..|..             
T Consensus       227 ~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l  306 (418)
T KOG1167|consen  227 NDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAAL  306 (418)
T ss_pred             CCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhc
Confidence                    1246999999999985 4566888999999999999999999985321 1111111100             


Q ss_pred             ccC---------------------C----C--------CCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370          102 STE---------------------L----R--------FPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus       102 ~~~---------------------~----~--------~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      .+.                     .    .        .+....+..+..+.+|+.+||..||.+|+|++++|+||||..
T Consensus       307 ~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~  386 (418)
T KOG1167|consen  307 PGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE  386 (418)
T ss_pred             CCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence            000                     0    0        000011123457899999999999999999999999999986


Q ss_pred             hHHh
Q 008370          149 LRQT  152 (568)
Q Consensus       149 ~~~~  152 (568)
                      ....
T Consensus       387 ~~~~  390 (418)
T KOG1167|consen  387 ADRT  390 (418)
T ss_pred             hhhh
Confidence            6543

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.60  E-value=9.9e-16  Score=181.65  Aligned_cols=134  Identities=16%  Similarity=0.255  Sum_probs=92.2

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHh
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT   82 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELlt   82 (568)
                      ..+|+||||||+||+++.++   ..++. ||.......   .....||+.|+|||++.+..|+.++|||||||++|||++
T Consensus       801 ~~~iiH~dlkp~Nil~~~~~---~~~~~-~~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~t  873 (968)
T PLN00113        801 SPAVVVGNLSPEKIIIDGKD---EPHLR-LSLPGLLCT---DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLT  873 (968)
T ss_pred             CCCeecCCCCHHhEEECCCC---ceEEE-ecccccccc---CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHh
Confidence            56999999999999998766   34554 665543322   123468899999999999999999999999999999999


Q ss_pred             CCCCCCCCcH-----HHHHHHHHhcc------CCCCCC--CcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           83 GKPPFDGSNQ-----LQLFQNILTST------ELRFPP--GAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        83 G~~PF~g~~~-----~~~~~~Il~~~------~~~~p~--~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+.||.....     .+.........      ......  ........++.+++.+||+.+|++||+++|+++.
T Consensus       874 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        874 GKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             CCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            9999854211     11111110000      001100  0111122357789999999999999999999654

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.56  E-value=7e-15  Score=155.75  Aligned_cols=135  Identities=19%  Similarity=0.306  Sum_probs=93.8

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccC-CCC-----cccchhhH
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNH-KYD-----AKADLWSV   73 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~-~ys-----~ksDIWSl   73 (568)
                      .++|+|||||.+||||..|.   ..-|+|||+|..+....   .....+||..|||||++.+. .+.     .+.||||+
T Consensus       334 Kp~IaHRDlkSkNVLvK~Dl---TccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYam  410 (534)
T KOG3653|consen  334 KPPIAHRDLKSKNVLVKNDL---TCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAM  410 (534)
T ss_pred             CCccccccccccceEEccCC---cEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHH
Confidence            46899999999999999887   79999999999876433   22336899999999999653 122     24899999


Q ss_pred             HHHHHHHHhCCC------------CCC---CC--cHHHHHHHHHhc-cCCCCCCCcccc-cCHHHHHHHHHhhccCCCCC
Q 008370           74 GAILFQLVTGKP------------PFD---GS--NQLQLFQNILTS-TELRFPPGAIEE-LHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        74 GviL~ELltG~~------------PF~---g~--~~~~~~~~Il~~-~~~~~p~~~~~~-ls~~~~dLI~~cL~~dP~~R  134 (568)
                      |.+||||++...            ||.   |.  ...++...++.. .++.+|...... -..-+.+.+..||..||+.|
T Consensus       411 gLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeAR  490 (534)
T KOG3653|consen  411 GLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEAR  490 (534)
T ss_pred             HHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhh
Confidence            999999988532            232   11  112233333332 244444322111 12456788999999999999


Q ss_pred             CCHHHH
Q 008370          135 ITFKEF  140 (568)
Q Consensus       135 pTaeEl  140 (568)
                      +|+.=+
T Consensus       491 LTA~Cv  496 (534)
T KOG3653|consen  491 LTAGCV  496 (534)
T ss_pred             hhhHHH
Confidence            998755

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.56  E-value=4.1e-15  Score=162.50  Aligned_cols=144  Identities=20%  Similarity=0.328  Sum_probs=114.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhh---ccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEII---QNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl---~~~~ys~ksDIWSlGviL   77 (568)
                      |..|=+|||||--|||++..+   .+|++|||.+..++.. .....++|||+|||||+.   ....|...+|||++|+..
T Consensus       129 hs~gk~hRdiKGanilltd~g---DvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitA  205 (829)
T KOG0576|consen  129 HSQGKIHRDIKGANILLTDEG---DVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITA  205 (829)
T ss_pred             hcCCcccccccccceeecccC---ceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccch
Confidence            445779999999999999888   5999999998776532 245678999999999986   456799999999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      .|+---++|.....+.+.+....+....+.........++.+.+|++.+|.++|++||+++.++.|||+..
T Consensus       206 iel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~  276 (829)
T KOG0576|consen  206 IELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ  276 (829)
T ss_pred             hhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence            99998888877766666554333332111111223455788999999999999999999999999999854

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.55  E-value=2.8e-15  Score=163.72  Aligned_cols=135  Identities=32%  Similarity=0.574  Sum_probs=113.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      +..+|+|||+|++||+++.+|   ++|+.|||+.+.....+..   |||..|||||++.  .+...+|+||||+++|||+
T Consensus       114 h~l~iiyrd~k~enilld~~G---hi~~tdfglske~v~~~~~---cgt~eymApEI~~--gh~~a~D~ws~gvl~fell  185 (612)
T KOG0603|consen  114 HKLGIAYRDYKLENVLLLLEG---HIKLTDFGLSKEAVKEKIA---CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELL  185 (612)
T ss_pred             chhHHHHhcccccceeecccC---ccccCCchhhhHhHhhhhc---ccchhhhhhHhhh--ccCCcccchhhhhhHHHHh
Confidence            345899999999999999988   7999999999876554433   9999999999998  5678899999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHhh
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQTV  153 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~~  153 (568)
                      +|..||.+    ++...|... .+.+|    ..++..+.+++..++..+|..|..     ..|+++|+||..+.|..
T Consensus       186 tg~~pf~~----~~~~~Il~~-~~~~p----~~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~~~  253 (612)
T KOG0603|consen  186 TGTLPFGG----DTMKRILKA-ELEMP----RELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDWNE  253 (612)
T ss_pred             hCCCCCch----HHHHHHhhh-ccCCc----hhhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeHhh
Confidence            99999988    555556543 33333    478889999999999999999985     47899999999887763

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.53  E-value=1.3e-14  Score=152.67  Aligned_cols=135  Identities=20%  Similarity=0.336  Sum_probs=94.6

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-----CCCccccCCCcccChhhhccC----CCC-c-ccchhh
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-----DLADTLCGSPLYMAPEIIQNH----KYD-A-KADLWS   72 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-----~~~~t~~GT~~YmAPEvl~~~----~ys-~-ksDIWS   72 (568)
                      +.|.|||||..|||+..++   .+-|+|+|+|......     -..+..+||..|||||++...    .|. + .+||||
T Consensus       335 PaIAHRDlKSKNILVKkn~---~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYa  411 (513)
T KOG2052|consen  335 PAIAHRDLKSKNILVKKNG---TCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYA  411 (513)
T ss_pred             chhhccccccccEEEccCC---cEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHH
Confidence            6899999999999999988   7999999999765433     134567999999999998432    222 2 389999


Q ss_pred             HHHHHHHHHhC----------CCCCCCC----cHHHHHHHHHhccCCC-CCCCcccc--cCHHHHHHHHHhhccCCCCCC
Q 008370           73 VGAILFQLVTG----------KPPFDGS----NQLQLFQNILTSTELR-FPPGAIEE--LHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        73 lGviL~ELltG----------~~PF~g~----~~~~~~~~Il~~~~~~-~p~~~~~~--ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      ||.++||+...          ++||.+.    ...+...+++-....+ ..+..|..  .-..+..+|+.||..+|.-|.
T Consensus       412 fgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRl  491 (513)
T KOG2052|consen  412 FGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARL  491 (513)
T ss_pred             HHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhh
Confidence            99999998752          5788642    2334444444322211 11222221  123456789999999999999


Q ss_pred             CHHHHH
Q 008370          136 TFKEFF  141 (568)
Q Consensus       136 TaeElL  141 (568)
                      |+-.+.
T Consensus       492 tALriK  497 (513)
T KOG2052|consen  492 TALRIK  497 (513)
T ss_pred             HHHHHH
Confidence            987663

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.51  E-value=2.9e-14  Score=142.29  Aligned_cols=145  Identities=21%  Similarity=0.326  Sum_probs=103.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc---C--CCCcccchhhHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN---H--KYDAKADLWSVGA   75 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~---~--~ys~ksDIWSlGv   75 (568)
                      ||...|||||||.+||||-..+.. .|||||||+.+..+..  ......+..|.+||++..   .  ..++..|+|.||+
T Consensus       137 MHsknlVHRdlK~eNiLif~~df~-rvKlcDFG~t~k~g~t--V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGI  213 (378)
T KOG1345|consen  137 MHSKNLVHRDLKAENILIFDADFY-RVKLCDFGLTRKVGTT--VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGI  213 (378)
T ss_pred             hhccchhhcccccceEEEecCCcc-EEEeeecccccccCce--ehhhhhhcccCCcHHHhhccccceEecccccchheee
Confidence            889999999999999999877655 8999999998764422  122234556899997632   2  3467799999999


Q ss_pred             HHHHHHhCCCCCCCCc----HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCC---CCHHHHHhchhHHH
Q 008370           76 ILFQLVTGKPPFDGSN----QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER---ITFKEFFNHRFLGE  148 (568)
Q Consensus        76 iL~ELltG~~PF~g~~----~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~R---pTaeElL~Hpff~~  148 (568)
                      ++|.+++|++||+...    ..-.+.+......+..| .....+++.+..+.++-|..+|++|   -++.......|...
T Consensus       214 i~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P-~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~  292 (378)
T KOG1345|consen  214 IFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALP-KKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEK  292 (378)
T ss_pred             eeeeeecCCCcchhhhccCchHHHHHHHhcccCccCc-hhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHh
Confidence            9999999999998532    22223334443344444 3446678999999999999999999   34444445556544


Q ss_pred             h
Q 008370          149 L  149 (568)
Q Consensus       149 ~  149 (568)
                      .
T Consensus       293 ~  293 (378)
T KOG1345|consen  293 L  293 (378)
T ss_pred             h
Confidence            3

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.50  E-value=4.6e-14  Score=132.70  Aligned_cols=105  Identities=36%  Similarity=0.676  Sum_probs=88.9

Q ss_pred             CCCCCeEecCCCCCCeEEec-CCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccC-CCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVST-NEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~-~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL   77 (568)
                      ||..+++|+||+|.||+++. ++   .++|+|||.+....... ......+...|++||.+... .++.+.|+|++|+++
T Consensus       108 lh~~~~~H~dl~~~ni~~~~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~  184 (215)
T cd00180         108 LHSNGIIHRDLKPENILLDSDNG---KVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL  184 (215)
T ss_pred             HHhCCeeccCCCHhhEEEeCCCC---cEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHH
Confidence            45679999999999999998 44   69999999998765432 12335577889999999776 788899999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhch
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHR  144 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hp  144 (568)
                      +++                                    ..+.+++.+|+..+|.+||++.++++|+
T Consensus       185 ~~l------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         185 YEL------------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HHH------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence            998                                    6778999999999999999999998774

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.47  E-value=3.2e-14  Score=152.93  Aligned_cols=134  Identities=31%  Similarity=0.505  Sum_probs=102.0

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-------CCccccCCCcccChhhhccCCCCcccchhhHHH
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-------LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA   75 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-------~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGv   75 (568)
                      |.+.+|+|+||.||++..+.   .+||+|||+........       ......||.+||+||.+.+..|+.++|||+||+
T Consensus       374 yk~~ihrdlkp~nif~~~d~---q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGl  450 (516)
T KOG1033|consen  374 YKGLIHRDLKPSNIFFSDDD---QLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGL  450 (516)
T ss_pred             hccchhhhccccccccccch---hhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHH
Confidence            56889999999999998887   79999999987765444       334568999999999999999999999999999


Q ss_pred             HHHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           76 ILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        76 iL~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      +|+|++. -...|..   ...+..+   ....+|+....+ .+.-.+|+.+|+...|.+||++.+.-.|.|.
T Consensus       451 il~EL~~~f~T~~er---~~t~~d~---r~g~ip~~~~~d-~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  451 ILAELLIQFSTQFER---IATLTDI---RDGIIPPEFLQD-YPEEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             HHHHHHHHhccHHHH---HHhhhhh---hcCCCChHHhhc-CcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence            9999997 3333321   1122222   233445444333 3455689999999999999988877767664

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.44  E-value=7.1e-14  Score=148.57  Aligned_cols=125  Identities=26%  Similarity=0.339  Sum_probs=90.0

Q ss_pred             CCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCC---c---HHHHH
Q 008370           23 VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGS---N---QLQLF   96 (568)
Q Consensus        23 ~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~---~---~~~~~   96 (568)
                      ....|||+|||-|.+...  .....+.|..|+|||++.+.+|++.+||||++|++|||+||-..|...   +   ..+-+
T Consensus       389 ~di~vKIaDlGNACW~~k--hFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHi  466 (590)
T KOG1290|consen  389 CDIRVKIADLGNACWVHK--HFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHI  466 (590)
T ss_pred             cceeEEEeeccchhhhhh--hhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHH
Confidence            344799999999987542  234457789999999999999999999999999999999999888532   1   12222


Q ss_pred             HHHHhc-----------cC-----------------CCCCC---------CcccccCHHHHHHHHHhhccCCCCCCCHHH
Q 008370           97 QNILTS-----------TE-----------------LRFPP---------GAIEELHPDCVDLCRCLLRQNPVERITFKE  139 (568)
Q Consensus        97 ~~Il~~-----------~~-----------------~~~p~---------~~~~~ls~~~~dLI~~cL~~dP~~RpTaeE  139 (568)
                      ..|+.-           +.                 +.+.+         ....+-..++.+|+.-||+.+|++|+|+.+
T Consensus       467 A~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~  546 (590)
T KOG1290|consen  467 ALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQ  546 (590)
T ss_pred             HHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHH
Confidence            223210           00                 00000         000111246789999999999999999999


Q ss_pred             HHhchhHHHh
Q 008370          140 FFNHRFLGEL  149 (568)
Q Consensus       140 lL~Hpff~~~  149 (568)
                      .++|||+..+
T Consensus       547 cl~hPwLn~~  556 (590)
T KOG1290|consen  547 CLKHPWLNPV  556 (590)
T ss_pred             HhcCccccCC
Confidence            9999999654

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.43  E-value=6e-13  Score=131.26  Aligned_cols=144  Identities=29%  Similarity=0.477  Sum_probs=108.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-------CCccccCCCcccChhhhcc---CCCCcccchh
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-------LADTLCGSPLYMAPEIIQN---HKYDAKADLW   71 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-------~~~t~~GT~~YmAPEvl~~---~~ys~ksDIW   71 (568)
                      |..+++||||||+||+++..+.  .+|++|||+++......       .....+|+..|++||.+.+   ..+....|+|
T Consensus       118 H~~~~~hrd~kp~nil~~~~~~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~  195 (384)
T COG0515         118 HSKGIIHRDIKPENILLDRDGR--VVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIW  195 (384)
T ss_pred             HhCCeeccCCCHHHeeecCCCC--eEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHH
Confidence            5568999999999999998752  58999999998655332       3467789999999999987   5778889999


Q ss_pred             hHHHHHHHHHhCCCCCCCCcH----HHHHHHHHhccCCCCCCCccccc----CHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           72 SVGAILFQLVTGKPPFDGSNQ----LQLFQNILTSTELRFPPGAIEEL----HPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        72 SlGviL~ELltG~~PF~g~~~----~~~~~~Il~~~~~~~p~~~~~~l----s~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ++|++++++++|..||.....    ......+................    ...+.+++.+++..+|..|.+..+...+
T Consensus       196 s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         196 SLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             HHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            999999999999999887663    34444333322110111111111    2578899999999999999999998877


Q ss_pred             hhHH
Q 008370          144 RFLG  147 (568)
Q Consensus       144 pff~  147 (568)
                      ++..
T Consensus       276 ~~~~  279 (384)
T COG0515         276 DLLA  279 (384)
T ss_pred             hHhh
Confidence            5543

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.40  E-value=3.9e-13  Score=129.62  Aligned_cols=98  Identities=30%  Similarity=0.559  Sum_probs=79.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhh-ccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEII-QNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl-~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+++|+||+|.||+++.++   .++|+|||++.......  ......++..|++||.+ ....++.++|+|+||++++
T Consensus       115 h~~~i~h~di~~~ni~v~~~~---~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~  191 (225)
T smart00221      115 HSLGIVHRDLKPENILLGMDG---LVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILY  191 (225)
T ss_pred             HhCCeecCCCCHHHEEEcCCC---CEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHH
Confidence            445999999999999999875   79999999998765442  33456788899999998 6677888999999999999


Q ss_pred             HHHhCCCCCCC-CcHH-HHHHHHHhc
Q 008370           79 QLVTGKPPFDG-SNQL-QLFQNILTS  102 (568)
Q Consensus        79 ELltG~~PF~g-~~~~-~~~~~Il~~  102 (568)
                      +|++|+.||.. .+.. ...+.+..+
T Consensus       192 ~l~~g~~pf~~~~~~~~~~~~~~~~~  217 (225)
T smart00221      192 ELLWGPEPFSGEGEFTSLLSDVWSFG  217 (225)
T ss_pred             HHHHCCCCccccchhHHHHHHHHhcC
Confidence            99999999987 4444 555555544

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.29  E-value=5.8e-13  Score=136.90  Aligned_cols=119  Identities=22%  Similarity=0.266  Sum_probs=79.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc--------CCCCcccchhhH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN--------HKYDAKADLWSV   73 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~--------~~ys~ksDIWSl   73 (568)
                      +..||||+||||+|++++.+|   .++|+||+.....+.....  ...+..|.+||....        ..++.+.|.|++
T Consensus       162 h~~GlVHgdi~~~nfll~~~G---~v~Lg~F~~~~r~g~~~~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~L  236 (288)
T PF14531_consen  162 HSYGLVHGDIKPENFLLDQDG---GVFLGDFSSLVRAGTRYRC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQL  236 (288)
T ss_dssp             HHTTEEEST-SGGGEEE-TTS----EEE--GGGEEETTEEEEG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHH
T ss_pred             hhcceEecccceeeEEEcCCC---CEEEcChHHHeecCceeec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHH
Confidence            456999999999999999988   7999999988765432211  234467999997743        257888999999


Q ss_pred             HHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCC
Q 008370           74 GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        74 GviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      |+++|.|++|..||.........       ...+..+ . .++..++.||.++|+.+|.+|
T Consensus       237 G~~ly~lWC~~lPf~~~~~~~~~-------~~~f~~C-~-~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  237 GITLYSLWCGRLPFGLSSPEADP-------EWDFSRC-R-DMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHHHHHHHHSS-STCCCGGGSTS-------GGGGTTS-S----HHHHHHHHHHT-SSGGGS
T ss_pred             HHHHHHHHHccCCCCCCCccccc-------cccchhc-C-CcCHHHHHHHHHHccCCcccC
Confidence            99999999999999865432111       1122322 2 788999999999999999987

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.28  E-value=1.5e-12  Score=140.74  Aligned_cols=84  Identities=27%  Similarity=0.473  Sum_probs=74.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcc-cchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~k-sDIWSlGviL~EL   80 (568)
                      |.-||||||||-+|++++.+|   .+||+|||.|... ......+++||..|.|||++.+.+|-.+ .|||++|++||.+
T Consensus       687 h~~~ivhrdikdenvivd~~g---~~klidfgsaa~~-ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillyti  762 (772)
T KOG1152|consen  687 HDQGIVHRDIKDENVIVDSNG---FVKLIDFGSAAYT-KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTI  762 (772)
T ss_pred             cccCceecccccccEEEecCC---eEEEeeccchhhh-cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEE
Confidence            566999999999999999988   7999999998654 4556778999999999999999998655 8999999999999


Q ss_pred             HhCCCCCCC
Q 008370           81 VTGKPPFDG   89 (568)
Q Consensus        81 ltG~~PF~g   89 (568)
                      +....||..
T Consensus       763 vykenpyyn  771 (772)
T KOG1152|consen  763 VYKENPYYN  771 (772)
T ss_pred             EeccCCCcC
Confidence            999999863

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.19  E-value=3.1e-11  Score=126.15  Aligned_cols=134  Identities=23%  Similarity=0.351  Sum_probs=94.9

Q ss_pred             CCCCeEecCCCCCCeEEecCC-CCCcEEEeecccceecCCC-------CCCccccCCCcccChhhhccCC-----CC-cc
Q 008370            2 CYVFMIVSANACQNLLVSTNE-VTPVLKIGDFGFARSLTPQ-------DLADTLCGSPLYMAPEIIQNHK-----YD-AK   67 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~-~~~vvKL~DFGlAr~l~~~-------~~~~t~~GT~~YmAPEvl~~~~-----ys-~k   67 (568)
                      +.+||.|||+|.+|||+.-++ .-+++.|+|||++--....       ...-...|.-..||||+....+     .+ .+
T Consensus       358 ~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~k  437 (598)
T KOG4158|consen  358 HKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEK  437 (598)
T ss_pred             HHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccch
Confidence            457999999999999997553 3478999999987432211       1122345677899999985332     11 46


Q ss_pred             cchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHH
Q 008370           68 ADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFK  138 (568)
Q Consensus        68 sDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTae  138 (568)
                      +|.|+.|.+.||++....||.+.....+-..-.+  .-.+| ..++.+++.+++++..+|+.||.+|++..
T Consensus       438 AD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yq--e~qLP-alp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  438 ADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQ--ESQLP-ALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             hhhhhhhhhHHHHhccCCcccccchheechhhhh--hhhCC-CCcccCChHHHHHHHHHhcCCccccCCcc
Confidence            9999999999999999999987443221111111  11222 23457889999999999999999999864

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.17  E-value=2.5e-11  Score=139.25  Aligned_cols=134  Identities=19%  Similarity=0.340  Sum_probs=88.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC--CCC------CCccccCCCcccChhhhccC----------C
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT--PQD------LADTLCGSPLYMAPEIIQNH----------K   63 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~--~~~------~~~t~~GT~~YmAPEvl~~~----------~   63 (568)
                      |..||.|||||.+||||+.=+   .+.|+||...+...  .+.      ...+...-..|.|||.+...          +
T Consensus       137 H~~gVcHGDIKsENILiTSWN---W~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~  213 (1431)
T KOG1240|consen  137 HKLGVCHGDIKSENILITSWN---WLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAP  213 (1431)
T ss_pred             HHcCccccccccceEEEeeec---hhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCccc
Confidence            457999999999999998644   68999998775421  111      11222233469999987431          1


Q ss_pred             -CCcccchhhHHHHHHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCccccc-CHHHHHHHHHhhccCCCCCCCHHHH
Q 008370           64 -YDAKADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEEL-HPDCVDLCRCLLRQNPVERITFKEF  140 (568)
Q Consensus        64 -ys~ksDIWSlGviL~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~l-s~~~~dLI~~cL~~dP~~RpTaeEl  140 (568)
                       .+++.||||+||++.|+++ |++||.-.   +++. ...+. -..+....+.+ ....+.|+..|++.||.+|.++++.
T Consensus       214 ~L~paMDIFS~GCViaELf~Eg~PlF~LS---QL~a-Yr~~~-~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedy  288 (1431)
T KOG1240|consen  214 LLTPAMDIFSAGCVIAELFLEGRPLFTLS---QLLA-YRSGN-ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDY  288 (1431)
T ss_pred             ccChhhhhhhhhHHHHHHHhcCCCcccHH---HHHh-HhccC-ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHH
Confidence             5677899999999999988 89998521   1111 11110 00110000111 2468899999999999999999998


Q ss_pred             Hhc
Q 008370          141 FNH  143 (568)
Q Consensus       141 L~H  143 (568)
                      |+.
T Consensus       289 L~~  291 (1431)
T KOG1240|consen  289 LQK  291 (1431)
T ss_pred             HHh
Confidence            875

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.12  E-value=1.8e-10  Score=120.63  Aligned_cols=143  Identities=13%  Similarity=0.145  Sum_probs=100.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCC--CcEEEeecccce--ecCCCC--------C-CccccCCCcccChhhhccCCCCcc
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVT--PVLKIGDFGFAR--SLTPQD--------L-ADTLCGSPLYMAPEIIQNHKYDAK   67 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~--~vvKL~DFGlAr--~l~~~~--------~-~~t~~GT~~YmAPEvl~~~~ys~k   67 (568)
                      ||..|+|||||||.|+++......  ..+.|.|||+++  ......        . ...+.||..|.++..-.+...+.+
T Consensus       138 lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~  217 (322)
T KOG1164|consen  138 LHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRR  217 (322)
T ss_pred             HHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCc
Confidence            578899999999999999876411  369999999998  321111        1 123559999999999999999999


Q ss_pred             cchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           68 ADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        68 sDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      .|+||++.++.+++.|..||.+.........+................+..+..++..+-..+...+|....+...
T Consensus       218 DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~  293 (322)
T KOG1164|consen  218 DDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL  293 (322)
T ss_pred             hhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence            9999999999999999999987653322222222111111110112344566777766666788899998776443

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.01  E-value=5.5e-10  Score=122.00  Aligned_cols=132  Identities=24%  Similarity=0.381  Sum_probs=96.7

Q ss_pred             EecCCCCCCeEEecCCCCCcEEEeecccceecCCC---CCCccccCCCcccChhhhccCC-------CCcccchhhHHHH
Q 008370            7 IVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---DLADTLCGSPLYMAPEIIQNHK-------YDAKADLWSVGAI   76 (568)
Q Consensus         7 IHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---~~~~t~~GT~~YmAPEvl~~~~-------ys~ksDIWSlGvi   76 (568)
                      .|+.|++.|++++..+   ++||+|||+.......   .......-...|.|||.+....       .+.+.|+||||++
T Consensus        71 ~hg~l~s~nClvd~~w---~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii  147 (484)
T KOG1023|consen   71 YHGALKSSNCLVDSRW---VLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGII  147 (484)
T ss_pred             eeeeeccccceeeeeE---EEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHH
Confidence            8999999999999998   8999999998765321   1111122344699999997631       3566999999999


Q ss_pred             HHHHHhCCCCCCCCc----HHHHHHHHHhccCCCCCCCcc--cccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           77 LFQLVTGKPPFDGSN----QLQLFQNILTSTELRFPPGAI--EELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        77 L~ELltG~~PF~g~~----~~~~~~~Il~~~~~~~p~~~~--~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      ++|+++...||....    +.++..++.......+.|..+  ....+++..+++.||..+|.+||+++++.
T Consensus       148 ~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  148 MYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             HHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHH
Confidence            999999999997532    334555555423333333332  14566899999999999999999998863

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=98.98  E-value=5.4e-10  Score=128.35  Aligned_cols=149  Identities=30%  Similarity=0.485  Sum_probs=121.7

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeecccceecCC------C--------------------------CCCccccCCCc
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP------Q--------------------------DLADTLCGSPL   52 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~------~--------------------------~~~~t~~GT~~   52 (568)
                      .++|+|++|+|+|+..++   +.+++|||.......      .                          .......||+.
T Consensus       924 ~r~h~~~~p~~~l~~~~g---h~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~ 1000 (1205)
T KOG0606|consen  924 LRKHRDLKPDSLLIAYDG---HRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPD 1000 (1205)
T ss_pred             hhhcccccccchhhcccC---CcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCc
Confidence            379999999999999887   689999984432110      0                          00123568999


Q ss_pred             ccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCC
Q 008370           53 YMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV  132 (568)
Q Consensus        53 YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~  132 (568)
                      |.+||.+.+......+|+|++|++++|.++|.+||....+.+.+.+|... ...+| ..+...+....+++.+++..+|.
T Consensus      1001 ~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~-~~~~p-~g~~~~s~~aq~~~~~ll~~~~~ 1078 (1205)
T KOG0606|consen 1001 YLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNR-DIPWP-EGPEEGSYEAQDLINRLLTEEPT 1078 (1205)
T ss_pred             ccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccC-CCCCC-CCccccChhhhhhhhhhhccCch
Confidence            99999999999999999999999999999999999999999999888754 33444 34467789999999999999999


Q ss_pred             CCCCHH---HHHhchhHHHhHHhhhhhcc
Q 008370          133 ERITFK---EFFNHRFLGELRQTVHAEQH  158 (568)
Q Consensus       133 ~RpTae---ElL~Hpff~~~~~~~~~~~~  158 (568)
                      +|..+.   ++..|+||+...|.....+.
T Consensus      1079 qr~~a~~~~e~k~~~~~~~~~~~~l~~q~ 1107 (1205)
T KOG0606|consen 1079 QRLGAKGAAEVKGHPFFQDVDWENLALQK 1107 (1205)
T ss_pred             hccCcccccccccCCccCCCCcccccccc
Confidence            999887   89999999998887655444

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=98.94  E-value=1.8e-10  Score=130.11  Aligned_cols=144  Identities=26%  Similarity=0.408  Sum_probs=111.2

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CC---CCccccC-CCcccChhhhccCCC-CcccchhhHHHH
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QD---LADTLCG-SPLYMAPEIIQNHKY-DAKADLWSVGAI   76 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~---~~~t~~G-T~~YmAPEvl~~~~y-s~ksDIWSlGvi   76 (568)
                      ..++.|+||||+|.+++.++.  .+|+.|||+|..+.. ..   .....+| ++.|+|||...+..| ....|+||.|++
T Consensus       142 ~~~~~h~~ikP~n~~l~~s~~--~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~  219 (601)
T KOG0590|consen  142 ENGVTHRDIKPSNSLLDESGS--ALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIV  219 (601)
T ss_pred             ccccccCCCCCccchhccCCC--cccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCccccccccc
Confidence            347999999999999998873  589999999987655 22   3345688 999999999987544 567999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      +..+++|..|+...........-.......+....+..+.....+++.+++..+|..|.+.+++..++|+..
T Consensus       220 l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  220 LSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             ccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence            999999999997654433221111111112223455678889999999999999999999999999999966

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.73  E-value=8.9e-09  Score=105.99  Aligned_cols=101  Identities=20%  Similarity=0.337  Sum_probs=81.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCC--CCcEEEeecccceecCCCCC--------CccccCCCcccChhhhccCCCCcccchh
Q 008370            2 CYVFMIVSANACQNLLVSTNEV--TPVLKIGDFGFARSLTPQDL--------ADTLCGSPLYMAPEIIQNHKYDAKADLW   71 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~--~~vvKL~DFGlAr~l~~~~~--------~~t~~GT~~YmAPEvl~~~~ys~ksDIW   71 (568)
                      |...+|+|||||+|+||...+.  ..+|.|+|||+|+...+...        .....||..||+-..-.+..-+..-|+=
T Consensus       141 H~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLE  220 (449)
T KOG1165|consen  141 HEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLE  220 (449)
T ss_pred             HhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHH
Confidence            4467999999999999986542  24799999999997654321        2356799999998877788888899999


Q ss_pred             hHHHHHHHHHhCCCCCCCC---cHHHHHHHHHhc
Q 008370           72 SVGAILFQLVTGKPPFDGS---NQLQLFQNILTS  102 (568)
Q Consensus        72 SlGviL~ELltG~~PF~g~---~~~~~~~~Il~~  102 (568)
                      ++|=+++.++-|..||.|.   +..+.+++|-..
T Consensus       221 aLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~  254 (449)
T KOG1165|consen  221 ALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGET  254 (449)
T ss_pred             HhhhhhhhhccCCCccccccCcchHHHHHHhccc
Confidence            9999999999999999874   466677777543

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=98.71  E-value=9.9e-09  Score=101.69  Aligned_cols=135  Identities=16%  Similarity=0.136  Sum_probs=93.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--------CCccccCCCcccChhhhccCCCCcccchhhH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--------LADTLCGSPLYMAPEIIQNHKYDAKADLWSV   73 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--------~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSl   73 (568)
                      |..++|||||||+|+|..-+.....+.++|||+|+...+..        ......||..|.+-....+...+..-|+=|+
T Consensus       128 H~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSv  207 (341)
T KOG1163|consen  128 HLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESV  207 (341)
T ss_pred             HhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhh
Confidence            34589999999999999876655679999999998765322        1234578999988776666666778999999


Q ss_pred             HHHHHHHHhCCCCCCCCc---HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC
Q 008370           74 GAILFQLVTGKPPFDGSN---QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT  136 (568)
Q Consensus        74 GviL~ELltG~~PF~g~~---~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT  136 (568)
                      |.+|..+-.|..||+|..   ..+.+++|.+......+.......+.++.-.+.-|=..--++-|.
T Consensus       208 gYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pd  273 (341)
T KOG1163|consen  208 GYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPD  273 (341)
T ss_pred             cceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCc
Confidence            999999999999999864   345566665442211111222345666666666665444455554

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=98.61  E-value=7.9e-08  Score=96.68  Aligned_cols=120  Identities=22%  Similarity=0.381  Sum_probs=86.5

Q ss_pred             CCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCC---cccchhhHHHHHHHHHhCCCC
Q 008370           10 ANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYD---AKADLWSVGAILFQLVTGKPP   86 (568)
Q Consensus        10 DLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys---~ksDIWSlGviL~ELltG~~P   86 (568)
                      -|....++|+++- ...+..+|--++..      .....-.|.||+||.++..+-+   ..+|+|||.+++||+.|...|
T Consensus       316 ~lns~hvmidedl-tarismad~kfsfq------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevp  388 (448)
T KOG0195|consen  316 YLNSKHVMIDEDL-TARISMADTKFSFQ------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVP  388 (448)
T ss_pred             hcccceEEecchh-hhheecccceeeee------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccc
Confidence            3677788888764 12333344333211      1122346789999999766544   458999999999999999999


Q ss_pred             CCCCcHHHHHHHHH-hccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHH
Q 008370           87 FDGSNQLQLFQNIL-TSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF  140 (568)
Q Consensus        87 F~g~~~~~~~~~Il-~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeEl  140 (568)
                      |....+.+.--+|. .+....+||    .+++....||.-|+..||.+||.++.+
T Consensus       389 fadlspmecgmkialeglrv~ipp----gis~hm~klm~icmnedpgkrpkfdmi  439 (448)
T KOG0195|consen  389 FADLSPMECGMKIALEGLRVHIPP----GISRHMNKLMNICMNEDPGKRPKFDMI  439 (448)
T ss_pred             cccCCchhhhhhhhhccccccCCC----CccHHHHHHHHHHhcCCCCcCCCccee
Confidence            99888777655553 333555555    668888999999999999999999876

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.58  E-value=2.4e-08  Score=98.66  Aligned_cols=88  Identities=16%  Similarity=0.117  Sum_probs=64.2

Q ss_pred             CCCCCeEecCC-CCCCeEEecCCCCCcEEEeecccceecCCCCC-----C---------ccccCCCcccChhhhccC-CC
Q 008370            1 MCYVFMIVSAN-ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-----A---------DTLCGSPLYMAPEIIQNH-KY   64 (568)
Q Consensus         1 m~~~~IIHrDL-KP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~-----~---------~t~~GT~~YmAPEvl~~~-~y   64 (568)
                      ||..||+|||| ||.|||++.++   .++|+|||+|........     .         .....++.|+.|+.-... ..
T Consensus       107 lH~~GIvHrDL~kp~NILv~~~g---~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~  183 (218)
T PRK12274        107 LHRCGVAHNDLAKEANWLVQEDG---SPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRT  183 (218)
T ss_pred             HHHCcCccCCCCCcceEEEcCCC---CEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccc
Confidence            46679999999 79999998766   699999999986543321     1         012357788888754322 22


Q ss_pred             C-cccchhhHHHHHHHHHhCCCCCCCCc
Q 008370           65 D-AKADLWSVGAILFQLVTGKPPFDGSN   91 (568)
Q Consensus        65 s-~ksDIWSlGviL~ELltG~~PF~g~~   91 (568)
                      + ...++++.|+.+|.++|+..++.+.+
T Consensus       184 ~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        184 SWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             hhHHHHHHHhcchHHHHHhccCCccccC
Confidence            3 44678899999999999998876543

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.48  E-value=5.2e-08  Score=104.00  Aligned_cols=57  Identities=16%  Similarity=0.127  Sum_probs=45.6

Q ss_pred             CCCCCeEecCC-CCCCeEEecCCCCCcEEEeecccceecCCCCC---------CccccCCCcccChhhhc
Q 008370            1 MCYVFMIVSAN-ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---------ADTLCGSPLYMAPEIIQ   60 (568)
Q Consensus         1 m~~~~IIHrDL-KP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---------~~t~~GT~~YmAPEvl~   60 (568)
                      ||..||+|||| ||+|||++.++   .+||+|||+|+.+.....         ..+.++++.|+|||.+.
T Consensus       127 lH~~gIiHrDL~KP~NILv~~~~---~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~  193 (365)
T PRK09188        127 LHRAGITHNDLAKPQNWLMGPDG---EAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALT  193 (365)
T ss_pred             HHHCCCeeCCCCCcceEEEcCCC---CEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCC
Confidence            46789999999 99999997765   699999999997654321         13567888999999884

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.48  E-value=1.1e-07  Score=110.90  Aligned_cols=84  Identities=15%  Similarity=0.185  Sum_probs=70.8

Q ss_pred             CCCCeEecCCCCCCeEEecC----CCCCcEEEeecccceecC---CCCCCccccCCCcccChhhhccCCCCcccchhhHH
Q 008370            2 CYVFMIVSANACQNLLVSTN----EVTPVLKIGDFGFARSLT---PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG   74 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~----~~~~vvKL~DFGlAr~l~---~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlG   74 (568)
                      |..+||||||||+|+||...    .....++|+|||.+-.+.   +.......++|-.+-++|+..+.++++.+|.|.+.
T Consensus       811 H~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlA  890 (974)
T KOG1166|consen  811 HAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLA  890 (974)
T ss_pred             HhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHH
Confidence            56799999999999999753    224579999999986543   34456677899999999999999999999999999


Q ss_pred             HHHHHHHhCCC
Q 008370           75 AILFQLVTGKP   85 (568)
Q Consensus        75 viL~ELltG~~   85 (568)
                      .+++-|+.|+.
T Consensus       891 a~~h~mLFG~y  901 (974)
T KOG1166|consen  891 ATVHVMLFGKY  901 (974)
T ss_pred             HHHHHHHHHHH
Confidence            99999998854

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.37  E-value=1.4e-07  Score=108.60  Aligned_cols=73  Identities=16%  Similarity=0.167  Sum_probs=55.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCC-CcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKY-DAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~y-s~ksDIWSlGvi   76 (568)
                      ||..+||||||||+|||++.++   .+||+|||+++...... .....++|+.|++||....... ....++|++|+-
T Consensus       120 LH~~gIiHrDLKP~NILl~~~g---~vkL~DFGls~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~~  194 (669)
T cd05610         120 LHRHGIIHRDLKPDNMLISNEG---HIKLTDFGLSKVTLNRELNMMDILTTPSMAKPKNDYSRTPGQVLSLISSLGFN  194 (669)
T ss_pred             HHhCCEEeCCccHHHEEEcCCC---CEEEEeCCCCccccCCcccccccccCccccCccccccCCCCceeeeeeecCcC
Confidence            4567999999999999998776   79999999998765332 3345689999999997644322 334678888853

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.32  E-value=2.9e-07  Score=102.82  Aligned_cols=144  Identities=16%  Similarity=0.226  Sum_probs=103.1

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC-----c---c--ccCCCcccChhhhccCCCCcccchhh
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA-----D---T--LCGSPLYMAPEIIQNHKYDAKADLWS   72 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~-----~---t--~~GT~~YmAPEvl~~~~ys~ksDIWS   72 (568)
                      +.++||++|.|++|.++.++   .+||+.|+++........+     .   .  ..-...|.|||++.+...+.++|++|
T Consensus       118 sAk~VH~ni~p~~i~~na~~---~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~~~~~~sd~fS  194 (700)
T KOG2137|consen  118 SAKVVHGNIQPEAIVVNANG---DWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGTTNTPASDVFS  194 (700)
T ss_pred             CcceeecccchhheeeccCc---ceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcccccccccccee
Confidence            45899999999999999887   6999999998654431111     0   0  11234599999998888888999999


Q ss_pred             HHHHHHHHH-hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           73 VGAILFQLV-TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        73 lGviL~ELl-tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +||++|.+. .|+.-+.+.+....+..-....... .......+++++++-+.+++..++.-||++.++...+||....
T Consensus       195 lG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~-~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~  272 (700)
T KOG2137|consen  195 LGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAG-AFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDPG  272 (700)
T ss_pred             eeeEEEEEecCCcchhhccCCcchhhhhhcccccc-cccccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCch
Confidence            999999998 4666665544322222111111110 0112247889999999999999999999999999999996643

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.31  E-value=1e-07  Score=95.52  Aligned_cols=65  Identities=22%  Similarity=0.235  Sum_probs=48.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+|||+||.||+++.++    ++|+|||..+........           ..++....|+.++|+|+||+.+.-+
T Consensus       151 lH~~gi~H~Dikp~Nili~~~g----i~liDfg~~~~~~e~~a~-----------d~~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        151 LHQHGMVSGDPHKGNFIVSKNG----LRIIDLSGKRCTAQRKAK-----------DRIDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             HHHcCCccCCCChHHEEEeCCC----EEEEECCCcccccchhhH-----------HHHHHHhHhcccccccceeEeehHH
Confidence            4677999999999999998765    899999988654322111           1144555677889999999987654

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.09  E-value=2.6e-06  Score=93.86  Aligned_cols=139  Identities=14%  Similarity=0.189  Sum_probs=102.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCc------cccCCCcccChhhhccCCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD------TLCGSPLYMAPEIIQNHKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~------t~~GT~~YmAPEvl~~~~ys~ksDIWSlGv   75 (568)
                      |.-.|+|-|+||.||+...++  ..++++|||+...+.......      ..-|...|++||...+. ++...|++++|.
T Consensus       239 hs~~~~~~~~kp~~i~~~~~~--~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~e  315 (524)
T KOG0601|consen  239 HSNNIVHDDLKPANIFTTSDW--TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGE  315 (524)
T ss_pred             CCCcccccccchhheeccccc--ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccc-cchHhhhcchhh
Confidence            445899999999999999884  268999999998887654322      12467789999998654 677899999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                      ++.+..++..++.......    +.......+|.+.....+......+..|++.+|..|++++.+++|+++.
T Consensus       316 v~l~~~l~~~~~~~g~~~~----W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~  383 (524)
T KOG0601|consen  316 VILEAILGSHLPSVGKNSS----WSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIH  383 (524)
T ss_pred             hhHhhHhhcccccCCCCCC----ccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcccccc
Confidence            9999988877665441111    1111111234444445566666788999999999999999999999885

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=97.71  E-value=2.5e-05  Score=80.97  Aligned_cols=136  Identities=15%  Similarity=0.203  Sum_probs=89.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      |.+.|+|+++.++-|++..++   .|||+--.....-..-.     -...-.|-++|.+||.-.....+..+|||+||.+
T Consensus       195 ~~PpiihgnlTc~tifiq~ng---LIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmc  271 (458)
T KOG1266|consen  195 CDPPIIHGNLTCDTIFIQHNG---LIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMC  271 (458)
T ss_pred             cCCccccCCcchhheeecCCc---eEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHH
Confidence            668999999999999999776   67765322211100000     0112245678999998666667788999999999


Q ss_pred             HHHHHhCCCC-CCCCcHH---HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           77 LFQLVTGKPP-FDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        77 L~ELltG~~P-F~g~~~~---~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      ..+|..+..- -.+....   +.+.+...+.           -...-++++.+|+.-.|..||++.+++.||.+-++..
T Consensus       272 AlemailEiq~tnseS~~~~ee~ia~~i~~l-----------en~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVhs  339 (458)
T KOG1266|consen  272 ALEMAILEIQSTNSESKVEVEENIANVIIGL-----------ENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEVHS  339 (458)
T ss_pred             HHHHHHheeccCCCcceeehhhhhhhheeec-----------cCccccCcCcccccCCCCCCcchhhhhcCceeeecch
Confidence            9999887643 2222211   1122111110           0122346788999999999999999999998755543

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.46  E-value=4.7e-05  Score=76.75  Aligned_cols=34  Identities=12%  Similarity=0.075  Sum_probs=30.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      ||..||+||||||.|||++.++   .++|+|||.++.
T Consensus       158 lH~~GI~HrDlkp~NILv~~~~---~v~LIDfg~~~~  191 (239)
T PRK01723        158 FHDAGVYHADLNAHNILLDPDG---KFWLIDFDRGEL  191 (239)
T ss_pred             HHHCCCCCCCCCchhEEEcCCC---CEEEEECCCccc
Confidence            5678999999999999998765   699999998865

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=97.45  E-value=0.00044  Score=74.12  Aligned_cols=135  Identities=20%  Similarity=0.258  Sum_probs=89.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc-----cCCCCcccchhhHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVGAI   76 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~-----~~~ys~ksDIWSlGvi   76 (568)
                      |..|.+-||++++|+|++++.   .|.|.|-..-............+|.+.|.+||.-.     +..-+...|.|.+|++
T Consensus       134 H~~Gh~vGDVn~~~~lVsd~~---~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavL  210 (637)
T COG4248         134 HEHGHVVGDVNQNSFLVSDDS---KVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVL  210 (637)
T ss_pred             HhcCCcccccCccceeeecCc---eEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHH
Confidence            456888899999999999887   57777644332223333455567899999999754     3344567899999999


Q ss_pred             HHHHHhC-CCCCCCCc-------HHHH-HHHH-----H-hccCCCCCC-C-cccccCHHHHHHHHHhhcc--CCCCCCCH
Q 008370           77 LFQLVTG-KPPFDGSN-------QLQL-FQNI-----L-TSTELRFPP-G-AIEELHPDCVDLCRCLLRQ--NPVERITF  137 (568)
Q Consensus        77 L~ELltG-~~PF~g~~-------~~~~-~~~I-----l-~~~~~~~p~-~-~~~~ls~~~~dLI~~cL~~--dP~~RpTa  137 (568)
                      +|+++.| +.||.|..       +.+. +..-     . .......++ . .+.-+++++..|..+|+..  ++.-||++
T Consensus       211 iF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a  290 (637)
T COG4248         211 IFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTA  290 (637)
T ss_pred             HHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCH
Confidence            9999885 99998642       2221 1000     0 111111111 1 2345678999999999865  46789998


Q ss_pred             HH
Q 008370          138 KE  139 (568)
Q Consensus       138 eE  139 (568)
                      +.
T Consensus       291 ~a  292 (637)
T COG4248         291 KA  292 (637)
T ss_pred             HH
Confidence            75

>PRK10345 hypothetical protein; Provisional

Probab=97.26  E-value=0.00012  Score=72.64  Aligned_cols=35  Identities=11%  Similarity=-0.086  Sum_probs=27.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCC-CCCcEEEeecccc
Q 008370            1 MCYVFMIVSANACQNLLVSTNE-VTPVLKIGDFGFA   35 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~-~~~vvKL~DFGlA   35 (568)
                      ||..+||||||||+|||++..+ ....++|+||+.+
T Consensus       121 Lh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        121 LLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             HHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            3567999999999999998643 2347999995544

>smart00090 RIO RIO-like kinase

Probab=97.19  E-value=0.00019  Score=72.38  Aligned_cols=35  Identities=17%  Similarity=0.093  Sum_probs=28.7

Q ss_pred             CCCCC-eEecCCCCCCeEEecCCCCCcEEEeecccceecC
Q 008370            1 MCYVF-MIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT   39 (568)
Q Consensus         1 m~~~~-IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~   39 (568)
                      ||..| |+||||||+||+++ ++   .++|+|||.+....
T Consensus       164 LH~~g~iiH~Dikp~NIli~-~~---~i~LiDFg~a~~~~  199 (237)
T smart00090      164 LYKEGELVHGDLSEYNILVH-DG---KVVIIDVSQSVELD  199 (237)
T ss_pred             HHhcCCEEeCCCChhhEEEE-CC---CEEEEEChhhhccC
Confidence            35568 99999999999998 43   59999999987543

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.14  E-value=0.00026  Score=78.37  Aligned_cols=135  Identities=19%  Similarity=0.189  Sum_probs=90.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCccc--ChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYM--APEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~Ym--APEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      +.+.++|+|+||.||++..++  ...++.|||++..+.-..  ....+.-.++  ++.......+..++|+++||..+.+
T Consensus       383 ~s~~~~~~d~~psni~i~~~~--~~~~~~~~~~~t~~~~~~--~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e  458 (524)
T KOG0601|consen  383 HSKLFVHLDVKPSNILISNDG--FFSKLGDFGCWTRLAFSS--GVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDE  458 (524)
T ss_pred             cchhhhcccccccceeeccch--hhhhccccccccccceec--ccccccccccccchhhccccccccccccccccccccc
Confidence            346899999999999999864  378999999986532211  1122223333  5555566788899999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ..++.+.-.....   ...|..+.. ...+    .....+..+.+.++..++..|+.+.++..|.-|..
T Consensus       459 ~~~~~~ls~~~~~---~~~i~~~~~-p~~~----~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~  519 (524)
T KOG0601|consen  459 AITGSPLSESGVQ---SLTIRSGDT-PNLP----GLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR  519 (524)
T ss_pred             cccCcccCccccc---ceeeecccc-cCCC----chHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence            9987653322221   112222211 1111    22266778888999999999999999988876643

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=97.02  E-value=0.00038  Score=67.04  Aligned_cols=33  Identities=18%  Similarity=0.334  Sum_probs=28.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      ||..||+|||++|.||+++ ++   .++++|||+++.
T Consensus       106 lH~~gi~H~Dl~~~Nil~~-~~---~~~liDfg~a~~  138 (199)
T TIGR03724       106 LHKAGIVHGDLTTSNIIVR-DD---KLYLIDFGLGKY  138 (199)
T ss_pred             HHHCCeecCCCCcceEEEE-CC---cEEEEECCCCcC
Confidence            4667999999999999998 33   699999999865

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=96.83  E-value=0.00057  Score=66.30  Aligned_cols=33  Identities=21%  Similarity=0.274  Sum_probs=28.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      ||..+|+|||++|.|||++ ++   .++|+|||+++.
T Consensus       111 lH~~~i~H~Dl~p~Nil~~-~~---~~~liDf~~a~~  143 (211)
T PRK14879        111 LHSAGIIHGDLTTSNMILS-GG---KIYLIDFGLAEF  143 (211)
T ss_pred             HHhCCcccCCCCcccEEEE-CC---CEEEEECCcccC
Confidence            4567999999999999998 33   589999999865

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=96.82  E-value=0.0007  Score=65.69  Aligned_cols=33  Identities=15%  Similarity=0.244  Sum_probs=29.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      ||..||||+||.+.||++..++    +.++|||++..
T Consensus       108 lH~~givHGDLTtsNiIl~~~~----i~~IDfGLg~~  140 (204)
T COG3642         108 LHKAGIVHGDLTTSNIILSGGR----IYFIDFGLGEF  140 (204)
T ss_pred             HHhcCeecCCCccceEEEeCCc----EEEEECCcccc
Confidence            7888999999999999998875    89999999864

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=96.75  E-value=0.00055  Score=76.94  Aligned_cols=34  Identities=18%  Similarity=0.293  Sum_probs=28.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceec
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSL   38 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l   38 (568)
                      ||..+|+||||||+|||++ ++   .++|+|||+++..
T Consensus       444 lH~~giiHrDlkp~NILl~-~~---~~~liDFGla~~~  477 (535)
T PRK09605        444 LHKAGIVHGDLTTSNFIVR-DD---RLYLIDFGLGKYS  477 (535)
T ss_pred             HHhCCCccCCCChHHEEEE-CC---cEEEEeCcccccC
Confidence            4567999999999999994 33   5899999999763

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=96.35  E-value=0.0021  Score=70.66  Aligned_cols=36  Identities=17%  Similarity=0.099  Sum_probs=31.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP   40 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~   40 (568)
                      +..|++|+|+||.||++..++   .++++|||++..+..
T Consensus       274 ~~~g~~H~D~hPgNilv~~~g---~i~liDfG~~~~l~~  309 (437)
T TIGR01982       274 LRDGFFHADLHPGNIFVLKDG---KIIALDFGIVGRLSE  309 (437)
T ss_pred             HhCCceeCCCCcccEEECCCC---cEEEEeCCCeeECCH
Confidence            456999999999999998776   699999999987754

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=95.84  E-value=0.0062  Score=56.65  Aligned_cols=29  Identities=17%  Similarity=0.115  Sum_probs=24.5

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      +++|||++|.||+++ ++   .++++|||.+..
T Consensus       108 ~~~HgD~~~~Nil~~-~~---~~~liDf~~a~~  136 (170)
T cd05151         108 VPCHNDLLPGNFLLD-DG---RLWLIDWEYAGM  136 (170)
T ss_pred             eeecCCCCcCcEEEE-CC---eEEEEecccccC
Confidence            479999999999998 33   589999998753

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.60  E-value=0.01  Score=57.92  Aligned_cols=34  Identities=24%  Similarity=0.197  Sum_probs=26.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT   39 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~   39 (568)
                      +..|||||||.+.|||++.++    +.|+|||.+....
T Consensus       124 ~~~givHGDLs~~NIlv~~~~----~~iIDf~qav~~~  157 (188)
T PF01163_consen  124 HKAGIVHGDLSEYNILVDDGK----VYIIDFGQAVDSS  157 (188)
T ss_dssp             HCTTEEESS-STTSEEEETTC----EEE--GTTEEETT
T ss_pred             HhcCceecCCChhhEEeecce----EEEEecCcceecC
Confidence            467999999999999999874    8999999886643

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=95.48  E-value=0.011  Score=57.64  Aligned_cols=37  Identities=16%  Similarity=0.167  Sum_probs=32.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      ||.-+||||||..+||++..++....+.++|||++..
T Consensus       129 lH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  129 LHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             hhhCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence            6788999999999999999888765679999999753

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.37  E-value=0.0073  Score=59.33  Aligned_cols=37  Identities=14%  Similarity=0.015  Sum_probs=32.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      ||..||+|+|+++.|||+..++....+.++||+-++.
T Consensus       134 lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  134 LHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            6788999999999999999887556799999998765

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=95.31  E-value=0.0099  Score=66.86  Aligned_cols=38  Identities=24%  Similarity=0.176  Sum_probs=31.3

Q ss_pred             CCCeEecCCCCCCeEEecCC-CCCcEEEeecccceecCC
Q 008370            3 YVFMIVSANACQNLLVSTNE-VTPVLKIGDFGFARSLTP   40 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~-~~~vvKL~DFGlAr~l~~   40 (568)
                      ..|++|+|+||.||+++.++ ..+.++++|||++..+..
T Consensus       278 ~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        278 RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            46999999999999998764 234799999999887653

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=94.90  E-value=0.0078  Score=67.74  Aligned_cols=146  Identities=23%  Similarity=0.239  Sum_probs=95.4

Q ss_pred             EecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCCCC
Q 008370            7 IVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP   86 (568)
Q Consensus         7 IHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~P   86 (568)
                      +|+|    ||+.....    .|..|||....+......++..+++.|++||+.....+..+.|.|++|+--.++.-|.+|
T Consensus       358 ~~~d----~~l~s~~~----~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pP  429 (829)
T KOG0576|consen  358 VHRD----NILGSEEE----VKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPP  429 (829)
T ss_pred             cCcc----cccccccc----cccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCC
Confidence            5666    88887754    799999999888766667788999999999999999999999999999987888777777


Q ss_pred             CCCCcHHHHHHHHHhccCCCCCCCcc-cccCHHH-HHHHHHhhccCCCCCCCHHHHHhchhHHHhHHhhhhhccCCCCCC
Q 008370           87 FDGSNQLQLFQNILTSTELRFPPGAI-EELHPDC-VDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPET  164 (568)
Q Consensus        87 F~g~~~~~~~~~Il~~~~~~~p~~~~-~~ls~~~-~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~~~~~~~~~~p~~  164 (568)
                      -....  .....+  +..+.-+.... ....+.. .++-..|+...|..|+..-..+.|.+|..-.-..+.......|..
T Consensus       430 r~~P~--~~~~~~--g~~p~s~~L~~~~aw~~~~~~~~~~~~~~g~P~~pkv~mgacfsKvfngCpl~i~~aaswIhp~t  505 (829)
T KOG0576|consen  430 RSSPP--AVLPMI--GNGPNSPMLTDKSAWSPVFHRDFPAPCLNGLPPTPKVHMGACFSKVFNGCPLRIHCAASWIHPST  505 (829)
T ss_pred             CCCCc--cccCCC--CCCCCccccchhhhcCcccccCCcccccCCCCCCCcchhhHHHHHHhccCcccceecccccCcch
Confidence            54310  000000  00000000000 0000011 135567888889999999999999999765544444333444433

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=94.88  E-value=0.013  Score=60.23  Aligned_cols=37  Identities=16%  Similarity=-0.028  Sum_probs=30.0

Q ss_pred             CCCCCeEecCCCCCCeEEecC----CCCCcEEEeeccccee
Q 008370            1 MCYVFMIVSANACQNLLVSTN----EVTPVLKIGDFGFARS   37 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~----~~~~vvKL~DFGlAr~   37 (568)
                      ||..||+|+|+++.|||++.+    +....+.|+||+.++.
T Consensus       154 LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~~  194 (268)
T PRK15123        154 MHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQI  194 (268)
T ss_pred             HHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcccc
Confidence            678899999999999999852    2234799999998753

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=92.96  E-value=0.013  Score=71.49  Aligned_cols=80  Identities=18%  Similarity=0.208  Sum_probs=67.7

Q ss_pred             eEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCC
Q 008370            6 MIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK   84 (568)
Q Consensus         6 IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~   84 (568)
                      -+|++||+-|.+|..+.   .+|++++|+.+... .....+...+++.|+.|++.....++.+.|+|..|+.+|....|.
T Consensus      1361 ~v~~~Lkf~lpmIVtny---~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n 1437 (2724)
T KOG1826|consen 1361 NVSKSLKFTLPMIVTNY---NVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGN 1437 (2724)
T ss_pred             chhhhhhhhccceecCC---cccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhccc
Confidence            57999999999998877   48999999999433 334556678899999999998888998899999999999999888


Q ss_pred             CCCC
Q 008370           85 PPFD   88 (568)
Q Consensus        85 ~PF~   88 (568)
                      .+|-
T Consensus      1438 ~~fi 1441 (2724)
T KOG1826|consen 1438 AYFI 1441 (2724)
T ss_pred             HHHH
Confidence            7763

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=91.44  E-value=0.11  Score=52.10  Aligned_cols=33  Identities=24%  Similarity=0.088  Sum_probs=28.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      ||..|+.|||..|.|++++.++    +++.||+..+.
T Consensus       151 lH~~G~~HGD~hpgNFlv~~~~----i~iID~~~k~~  183 (229)
T PF06176_consen  151 LHKHGFYHGDPHPGNFLVSNNG----IRIIDTQGKRM  183 (229)
T ss_pred             HHHcCCccCCCCcCcEEEECCc----EEEEECccccc
Confidence            4667999999999999999765    89999997654

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PRK05231 homoserine kinase; Provisional

Probab=90.02  E-value=0.21  Score=51.92  Aligned_cols=30  Identities=23%  Similarity=0.135  Sum_probs=25.4

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccce
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFAR   36 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr   36 (568)
                      .+++|+|+.|.|||++.+.   +.-|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~~~---~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDR---LSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEECCc---eEEEEeccccc
Confidence            4899999999999998654   45799999874

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=89.94  E-value=0.45  Score=54.21  Aligned_cols=75  Identities=17%  Similarity=0.302  Sum_probs=52.9

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC-CccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHh
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT   82 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~-~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELlt   82 (568)
                      -+++|++|.-+-|+++..|   .+||++|-++........ .....--..|..|+.+....  -..|.|.|||++++++.
T Consensus       124 ~~lvHgNv~~~SVfVn~~G---eWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~n  198 (690)
T KOG1243|consen  124 CNLVHGNVCKDSVFVNESG---EWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFN  198 (690)
T ss_pred             CCeeeccEeeeeEEEcCCC---cEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhC
Confidence            5799999999999999988   699999998865443221 11111122356666543222  34799999999999999


Q ss_pred             C
Q 008370           83 G   83 (568)
Q Consensus        83 G   83 (568)
                      |
T Consensus       199 g  199 (690)
T KOG1243|consen  199 G  199 (690)
T ss_pred             c
Confidence            8

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=89.94  E-value=0.27  Score=48.86  Aligned_cols=31  Identities=26%  Similarity=0.218  Sum_probs=25.4

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      .+++|+|+.+.||+++.++   +.-|+||+.+..
T Consensus       164 ~~l~HGD~~~~Nvlv~~~~---i~giIDw~~a~~  194 (235)
T cd05155         164 PVWFHGDLAPGNLLVQDGR---LSAVIDFGCLGV  194 (235)
T ss_pred             ceEEeCCCCCCcEEEECCC---EEEEEeCcccCc
Confidence            4689999999999998654   557999998743

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=88.71  E-value=0.26  Score=47.56  Aligned_cols=31  Identities=26%  Similarity=0.178  Sum_probs=20.4

Q ss_pred             CCeEecCCCCCCeEEe-cCCCCCcEEEeeccccee
Q 008370            4 VFMIVSANACQNLLVS-TNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~-~~~~~~vvKL~DFGlAr~   37 (568)
                      ..++|+|+.|.|||++ .++   .+-|+||+.+..
T Consensus       166 ~~~~HgD~~~~Nil~~~~~~---~i~iID~e~a~~  197 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVDPSDG---RIGIIDFEDAGW  197 (239)
T ss_dssp             EEEE-SS-SGGGEEEESSTT---EEEE--GTT-EE
T ss_pred             cEEEEeccccccceeeeccc---eeEEEecccceE
Confidence            4699999999999999 333   457999998754

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=87.27  E-value=0.42  Score=49.58  Aligned_cols=30  Identities=27%  Similarity=0.167  Sum_probs=26.0

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccce
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFAR   36 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr   36 (568)
                      .+++|+|+.+.||+++.++   .+.|+||+.+.
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~---~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDS---VKGVIDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCcEEEECCc---eEEEeeccccc
Confidence            5899999999999998865   56899999764

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=87.16  E-value=0.48  Score=47.19  Aligned_cols=30  Identities=13%  Similarity=0.177  Sum_probs=25.7

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccce
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFAR   36 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr   36 (568)
                      +.++|+|+.|.|||++.++   ++.|+||+.+.
T Consensus       163 ~~l~HgD~~~~Nil~~~~~---~~~iIDwe~a~  192 (244)
T cd05150         163 LVVTHGDACLPNIIVDPGK---FSGFIDLGRLG  192 (244)
T ss_pred             eEEECCCCCCccEEEeCCc---EEEEEEccccc
Confidence            4689999999999998754   67899999774

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=86.75  E-value=0.56  Score=48.32  Aligned_cols=31  Identities=23%  Similarity=0.222  Sum_probs=26.2

Q ss_pred             CCCeEecCCCCCCeEEecC----CCCCcEEEeecccce
Q 008370            3 YVFMIVSANACQNLLVSTN----EVTPVLKIGDFGFAR   36 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~----~~~~vvKL~DFGlAr   36 (568)
                      ..+++|+|+.+.|||++.+    +   .++++||..|.
T Consensus       178 ~~~lcH~Dl~~~Nil~~~~~~~~~---~i~lIDwEya~  212 (302)
T cd05156         178 PVVFCHNDLQEGNILLLNPSSETK---KLVLIDFEYAS  212 (302)
T ss_pred             CceEEecCCCcCeEEecCCCCCCC---cEEEEeeCCCC
Confidence            3579999999999999874    3   58999999874

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=86.39  E-value=0.46  Score=48.72  Aligned_cols=30  Identities=27%  Similarity=0.197  Sum_probs=25.7

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccce
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFAR   36 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr   36 (568)
                      .+++|+|+.|.|||++.++   ++.|.||+.+.
T Consensus       175 ~~l~HgD~~~~Nil~~~~~---~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDE---LSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCcccEEEeCCc---eEEEeehhhhc
Confidence            4799999999999998765   56899999774

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=86.14  E-value=0.49  Score=48.89  Aligned_cols=30  Identities=17%  Similarity=0.081  Sum_probs=26.3

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccce
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFAR   36 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr   36 (568)
                      .||||||+.+-||+++.++   -+.++||--+.
T Consensus       221 ~GiVHGDlSefNIlV~~dg---~~~vIDwPQ~v  250 (304)
T COG0478         221 RGIVHGDLSEFNILVTEDG---DIVVIDWPQAV  250 (304)
T ss_pred             cCccccCCchheEEEecCC---CEEEEeCcccc
Confidence            5999999999999999987   48999997553

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=84.83  E-value=0.66  Score=51.81  Aligned_cols=87  Identities=17%  Similarity=0.132  Sum_probs=60.2

Q ss_pred             CcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCC-------CcccccCHHHHHHHHHhhccCCCCCCCH
Q 008370           65 DAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPP-------GAIEELHPDCVDLCRCLLRQNPVERITF  137 (568)
Q Consensus        65 s~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~-------~~~~~ls~~~~dLI~~cL~~dP~~RpTa  137 (568)
                      .+|+|||++|.++.++..|..-+......+....+.+-.......       .....++.....+.++|+-..|..||..
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~  188 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLP  188 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccch
Confidence            368999999999999999988776655555444443321110000       0111334566778889999999999999


Q ss_pred             HHHHhchhHHHhHH
Q 008370          138 KEFFNHRFLGELRQ  151 (568)
Q Consensus       138 eElL~Hpff~~~~~  151 (568)
                      .++.+|+-|.++-.
T Consensus       189 ~~~~k~~i~~ev~~  202 (725)
T KOG1093|consen  189 MELSKRCSFTEVYK  202 (725)
T ss_pred             hHHhcCccHHHHHh
Confidence            99999999987643

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=84.76  E-value=0.76  Score=45.33  Aligned_cols=32  Identities=13%  Similarity=0.213  Sum_probs=25.9

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      .+++|+|+.+.|||++.++.  .+.|+||-.|..
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~--~~~lIDwe~a~~  201 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKN--SVKFIDYEYAGY  201 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCC--CEEEEEcccCCc
Confidence            46899999999999997321  589999998753

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>TIGR02721 ycfN_thiK thiamine kinase

Probab=84.40  E-value=0.73  Score=46.39  Aligned_cols=30  Identities=23%  Similarity=0.305  Sum_probs=25.6

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      ..++|+|+.|.||+++.++    ++|+||..|..
T Consensus       146 ~~l~H~Dl~~~Nil~~~~~----~~lIDwE~a~~  175 (256)
T TIGR02721       146 LAPLHMDVHAYNLVVTPQG----LKLIDWEYASD  175 (256)
T ss_pred             CeeecCCCCcCcEEEeCCC----CEEEeccccCc
Confidence            4689999999999998765    68999998754

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=84.30  E-value=0.91  Score=46.73  Aligned_cols=30  Identities=20%  Similarity=0.247  Sum_probs=25.1

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccce
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFAR   36 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr   36 (568)
                      ..+++|||+.+.||+++.+    .+.|+||+.+.
T Consensus       186 ~~~liHgD~~~~Nil~~~~----~i~lIDfd~~~  215 (313)
T TIGR02906       186 IRGFCHQDYAYHNILLKDN----EVYVIDFDYCT  215 (313)
T ss_pred             cCceEcCCCCcccEEEeCC----cEEEEECcccc
Confidence            3589999999999999873    37899999764

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PRK10271 thiK thiamine kinase; Provisional

Probab=83.69  E-value=0.95  Score=44.23  Aligned_cols=29  Identities=21%  Similarity=0.242  Sum_probs=25.0

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      ...|+|+.|.||++..++    ++|+||+.|..
T Consensus        78 ~p~H~D~~~~N~~~~~~~----~~lIDwe~a~~  106 (188)
T PRK10271         78 APLHMDVHAGNLVHSASG----LRLIDWEYAGD  106 (188)
T ss_pred             eeecCCCCCccEEEECCC----EEEEeCCcccC
Confidence            568999999999998765    89999998854

>cd02656 MIT MIT: domain contained within Microtubule Interacting and Trafficking molecules

Probab=83.15  E-value=5.8  Score=32.39  Aligned_cols=65  Identities=20%  Similarity=0.199  Sum_probs=49.9

Q ss_pred             HHHHHHhhhhhhHHHHhhcccchhHHHHHHHHHHHHHHHhhcccCCCCCCCCCChhhHHHHHHHHHHHhhhhhhe
Q 008370          478 IYQRALSVGKIGAVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQSHQSNF  552 (568)
Q Consensus       478 ifq~aL~~gr~~av~El~~~~~~~~~~Y~~a~~lL~fll~e~~~l~~np~~~l~~~d~~r~~~~i~~l~~rl~~~  552 (568)
                      .++.|+.+.+.|--.|=.|+.+.|...|..|+-.|.-++...          -++..|.+++..|...-.|...|
T Consensus         2 ~~~~a~~l~~~Av~~D~~g~~~~Al~~Y~~a~e~l~~~~~~~----------~~~~~k~~l~~k~~~yl~RaE~L   66 (75)
T cd02656           2 LLQQAKELIKQAVKEDEDGNYEEALELYKEALDYLLQALKAE----------KEPKLRKLLRKKVKEYLDRAEFL   66 (75)
T ss_pred             HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhccC----------CCHHHHHHHHHHHHHHHHHHHHH
Confidence            357788888888666677999999999999999999988553          25677788777777666665443

The MIT domain is found in sorting nexins, the nuclear thiol protease PalBH, the AAA protein spastin and archaebacterial proteins with similar domain architecture, vacuolar sorting proteins and others. The molecular function of the MIT domain is unclear.

>PRK09902 hypothetical protein; Provisional

Probab=82.77  E-value=0.58  Score=46.64  Aligned_cols=36  Identities=17%  Similarity=0.051  Sum_probs=29.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      ||..|+.|+|+.+.||+++.++ ...++++||--++.
T Consensus       144 LH~~Gv~Hgdly~khIll~~~g-~~~v~lIDlEk~r~  179 (216)
T PRK09902        144 MHSVNRQHGCCYVRHIYVKTEG-KAEAGFLDLEKSRR  179 (216)
T ss_pred             HHHCCCcCCCCCHhheeecCCC-CeeEEEEEhhccch
Confidence            6788999999999999998655 23599999987654

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=82.35  E-value=1  Score=47.82  Aligned_cols=29  Identities=24%  Similarity=0.156  Sum_probs=25.5

Q ss_pred             eEecCCCCCCeEEecCCCCCcEEEeecccce
Q 008370            6 MIVSANACQNLLVSTNEVTPVLKIGDFGFAR   36 (568)
Q Consensus         6 IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr   36 (568)
                      |||+|+.|.||+++.+..  ++.+.|||.+.
T Consensus       199 iIH~D~~~~NVl~d~~~~--~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTD--VSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCC--eeeEEEccccc
Confidence            999999999999998763  57899999774

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=82.01  E-value=1.1  Score=46.16  Aligned_cols=32  Identities=13%  Similarity=0.165  Sum_probs=25.7

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      ..++|+|+.|.|||++.++  .+.-|.||+.+..
T Consensus       185 ~~lvHGD~~~~Nilv~~~~--~~~gviDWe~a~i  216 (276)
T cd05152         185 TVLVHGDLHPGHILIDEDA--RVTGLIDWTEAKV  216 (276)
T ss_pred             CeeEeCCCCCCcEEEeCCC--CEEEEECcHhccc
Confidence            3689999999999998643  2567999998754

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PF04212 MIT: MIT (microtubule interacting and transport) domain; InterPro: IPR007330 The MIT domain is found in vacuolar sorting proteins, spastin (probable ATPase involved in the assembly or function of nuclear protein complexes), and a sorting nexin, which may play a role in intracellular trafficking

Probab=81.37  E-value=8.8  Score=30.78  Aligned_cols=60  Identities=18%  Similarity=0.262  Sum_probs=45.8

Q ss_pred             HHHHHhhhhhhHHHHhhcccchhHHHHHHHHHHHHHHHhhcccCCCCCCCCCChhhHHHHHHHHHHHhhh
Q 008370          479 YQRALSVGKIGAVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINNLQSH  548 (568)
Q Consensus       479 fq~aL~~gr~~av~El~~~~~~~~~~Y~~a~~lL~fll~e~~~l~~np~~~l~~~d~~r~~~~i~~l~~r  548 (568)
                      ++.|+.+.+.|.-.|=-|+-..|...|.+|+-.|.-.+...          -++..|+.++..+..--.|
T Consensus         2 ~~~A~~~~~~Av~~D~~g~~~~A~~~Y~~ai~~l~~~~~~~----------~~~~~~~~l~~k~~~yl~R   61 (69)
T PF04212_consen    2 LDKAIELIKKAVEADEAGNYEEALELYKEAIEYLMQALKSE----------SNPERRQALRQKMKEYLER   61 (69)
T ss_dssp             HHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHS----------TTHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhccC----------CCHHHHHHHHHHHHHHHHH
Confidence            57889999999888888999999999999999999999876          1445555555444443333

; PDB: 2DL1_A 2JQK_A 1WR0_A 2CPT_A 2JQH_A 2V6Y_A 2JQ9_A 2K3W_A 1YXR_A 3EAB_E ....

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=81.33  E-value=1.2  Score=44.42  Aligned_cols=30  Identities=17%  Similarity=-0.031  Sum_probs=24.9

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      ..++|+|+.|.||+++.++    +.|+||+.+..
T Consensus       153 ~~~~HgD~~~~Nii~~~~~----~~iIDwe~a~~  182 (226)
T TIGR02172       153 STCLHGDFQIGNLITSGKG----TYWIDLGDFGY  182 (226)
T ss_pred             CceEecCCCCCcEEEcCCC----cEEEechhcCc
Confidence            3568999999999998754    78999998753

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain

Probab=80.46  E-value=1.6  Score=42.42  Aligned_cols=34  Identities=9%  Similarity=0.102  Sum_probs=26.6

Q ss_pred             CCeEecCCCCCCeEEecCCC--CCcEEEeeccccee
Q 008370            4 VFMIVSANACQNLLVSTNEV--TPVLKIGDFGFARS   37 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~--~~vvKL~DFGlAr~   37 (568)
                      ..++|||+.+.||++..++.  ...+.|.||..++.
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~~  155 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHY  155 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccCCc
Confidence            46899999999999986432  22589999998754

subfamily of choline kinases

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	568
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		4e-20
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		5e-20
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		6e-20
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		6e-20
2oza_A	356	Structure Of P38alpha Complex Length = 356		7e-20
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		7e-20
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		7e-20
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		7e-20
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		8e-20
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		8e-20
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		9e-20
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		9e-20
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		1e-19
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		3e-19
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-19
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		4e-19
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		5e-19
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		6e-19
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		1e-18
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		2e-18
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		2e-18
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-18
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		2e-17
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-17
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		2e-17
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		3e-17
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		3e-17
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		3e-17
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		3e-17
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		5e-17
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		5e-17
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		6e-17
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-16
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		4e-16
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		5e-16
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		5e-16
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		5e-16
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		6e-16
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		1e-15
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		1e-15
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		1e-15
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		2e-15
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-15
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-15
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-15
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		2e-15
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-15
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-15
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-15
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		2e-15
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		3e-15
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		3e-15
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		3e-15
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		3e-15
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		3e-15
3soa_A	444	Full-Length Human Camkii Length = 444		4e-15
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		4e-15
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		4e-15
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		4e-15
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		4e-15
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		4e-15
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		5e-15
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		5e-15
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		5e-15
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		6e-15
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		6e-15
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		7e-15
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		7e-15
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		8e-15
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		8e-15
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		9e-15
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		9e-15
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		9e-15
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		9e-15
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		9e-15
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		9e-15
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		1e-14
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		1e-14
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		1e-14
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		1e-14
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		1e-14
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		1e-14
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		1e-14
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		1e-14
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		1e-14
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		1e-14
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		1e-14
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		1e-14
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-14
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-14
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-14
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-14
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-14
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		2e-14
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		2e-14
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		2e-14
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		2e-14
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		2e-14
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		2e-14
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		2e-14
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		2e-14
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		2e-14
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		2e-14
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		2e-14
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		3e-14
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		3e-14
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		4e-14
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-14
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		4e-14
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-14
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		4e-14
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		4e-14
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		4e-14
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		4e-14
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-14
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-14
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		4e-14
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		4e-14
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		4e-14
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		4e-14
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		4e-14
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		4e-14
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		4e-14
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		4e-14
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-14
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		4e-14
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-14
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		4e-14
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-14
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		4e-14
4ae6_A	343	Structure And Function Of The Human Sperm-specific		5e-14
4ae9_A	343	Structure And Function Of The Human Sperm-specific		5e-14
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		5e-14
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		5e-14
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		5e-14
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		5e-14
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		6e-14
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		6e-14
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		7e-14
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		7e-14
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		8e-14
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		9e-14
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		9e-14
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		9e-14
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-13
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-13
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-13
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-13
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-13
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-13
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-13
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-13
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-13
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		2e-13
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		2e-13
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		2e-13
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-13
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		3e-13
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		3e-13
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		3e-13
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		3e-13
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		3e-13
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		3e-13
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		3e-13
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		3e-13
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		3e-13
3kk9_A	282	Camkii Substrate Complex B Length = 282		3e-13
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		3e-13
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		4e-13
3kk8_A	284	Camkii Substrate Complex A Length = 284		4e-13
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		4e-13
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		4e-13
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		4e-13
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		5e-13
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		7e-13
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		7e-13
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		7e-13
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		8e-13
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		8e-13
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		9e-13
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		9e-13
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		9e-13
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		1e-12
3g51_A	325	Structural Diversity Of The Active Conformation Of		1e-12
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		1e-12
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		1e-12
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		1e-12
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		1e-12
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-12
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		1e-12
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		1e-12
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		1e-12
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		1e-12
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-12
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		1e-12
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		1e-12
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		1e-12
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-12
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-12
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		1e-12
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-12
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		1e-12
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		2e-12
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		2e-12
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-12
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		2e-12
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		2e-12
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		2e-12
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		2e-12
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		2e-12
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		2e-12
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		2e-12
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		2e-12
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		2e-12
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		2e-12
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		2e-12
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		3e-12
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		3e-12
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		3e-12
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		3e-12
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		4e-12
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		5e-12
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		5e-12
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		5e-12
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		5e-12
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		5e-12
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		5e-12
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		6e-12
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		6e-12
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		7e-12
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		1e-11
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		1e-11
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		1e-11
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		1e-11
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-11
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		1e-11
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		1e-11
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		1e-11
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		2e-11
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		2e-11
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-11
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-11
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		2e-11
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		2e-11
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		2e-11
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		2e-11
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		2e-11
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-11
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-11
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-11
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		2e-11
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		2e-11
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-11
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-11
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		2e-11
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-11
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		2e-11
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-11
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		2e-11
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		2e-11
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		3e-11
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		3e-11
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		3e-11
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		3e-11
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		3e-11
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		3e-11
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		3e-11
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		4e-11
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		4e-11
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		5e-11
4fie_A	423	Full-Length Human Pak4 Length = 423		5e-11
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		6e-11
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		6e-11
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		7e-11
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		7e-11
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		7e-11
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		7e-11
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		8e-11
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		1e-10
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		1e-10
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-10
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-10
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-10
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		2e-10
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-10
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		2e-10
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		2e-10
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		3e-10
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		3e-10
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		3e-10
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		3e-10
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		4e-10
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		5e-10
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		6e-10
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		6e-10
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		7e-10
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		9e-10
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		9e-10
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		1e-09
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		1e-09
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		1e-09
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		1e-09
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		1e-09
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		1e-09
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-09
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		2e-09
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-09
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-09
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-09
3fpq_A	290	Crystal Structure Of The Kinase Domain Of Wnk1 Leng		2e-09
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		2e-09
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		2e-09
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		3e-09
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		3e-09
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		3e-09
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		3e-09
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		3e-09
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		3e-09
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		3e-09
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		3e-09
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		3e-09
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		3e-09
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		3e-09
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		4e-09
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		4e-09
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		4e-09
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		4e-09
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		4e-09
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		4e-09
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		4e-09
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		4e-09
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		4e-09
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		4e-09
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		4e-09
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		4e-09
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		5e-09
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		5e-09
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		5e-09
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-09
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-09
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		5e-09
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		5e-09
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		5e-09
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		5e-09
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		6e-09
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		6e-09
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		6e-09
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		6e-09
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		6e-09
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		6e-09
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		6e-09
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		7e-09
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		7e-09
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		7e-09
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		7e-09
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		7e-09
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		7e-09
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		7e-09
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		7e-09
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		7e-09
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		8e-09
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		8e-09
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		8e-09
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		8e-09
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		8e-09
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		8e-09
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		8e-09
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		1e-08
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		1e-08
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-08
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		1e-08
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		1e-08
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		1e-08
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-08
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		2e-08
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		2e-08
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-08
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		2e-08
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		2e-08
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		2e-08
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-08
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		2e-08
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		2e-08
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		2e-08
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		2e-08
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		2e-08
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		2e-08
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		2e-08
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		2e-08
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		2e-08
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-08
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-08
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		3e-08
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		3e-08
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		3e-08
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-08
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-08
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		3e-08
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-08
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		3e-08
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		3e-08
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		3e-08
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-08
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-08
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		3e-08
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		3e-08
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-08
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-08
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		4e-08
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		4e-08
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		4e-08
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		4e-08
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		4e-08
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		4e-08
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		4e-08
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-08
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		4e-08
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		5e-08
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		5e-08
1fvr_A	327	Tie2 Kinase Domain Length = 327		5e-08
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		6e-08
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		6e-08
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		6e-08
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		6e-08
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		6e-08
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		6e-08
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		6e-08
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-08
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		6e-08
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		6e-08
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		6e-08
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		6e-08
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		6e-08
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		7e-08
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		7e-08
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		7e-08
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		7e-08
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		7e-08
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		7e-08
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		7e-08
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		7e-08
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		7e-08
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		7e-08
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		7e-08
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		7e-08
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		8e-08
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		8e-08
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		8e-08
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		8e-08
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		8e-08
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		8e-08
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		8e-08
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		8e-08
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		8e-08
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		8e-08
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		8e-08
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		9e-08
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		9e-08
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		9e-08
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		9e-08
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		9e-08
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		1e-07
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-07
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-07
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		1e-07
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		1e-07
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		1e-07
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		1e-07
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		1e-07
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-07
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		1e-07
3b2t_A	311	Structure Of Phosphotransferase Length = 311		1e-07
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		1e-07
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-07
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		1e-07
2pl0_A	289	Lck Bound To Imatinib Length = 289		1e-07
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		1e-07
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-07
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		1e-07
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		1e-07
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		1e-07
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		1e-07
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		1e-07
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-07
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-07
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		1e-07
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		1e-07
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		1e-07
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		1e-07
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		1e-07
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		1e-07
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		1e-07
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		1e-07
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		1e-07
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		1e-07
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		1e-07
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		1e-07
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-07
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		1e-07
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-07
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		1e-07
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		1e-07
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		1e-07
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		1e-07
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		1e-07
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		2e-07
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		2e-07
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		2e-07
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		2e-07
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		2e-07
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		2e-07
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		2e-07
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		2e-07
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-07
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		2e-07
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		2e-07
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		2e-07
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		2e-07
3v5q_A	297	Discovery Of A Selective Trk Inhibitor With Efficac		2e-07
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-07
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		2e-07
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		2e-07
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		2e-07
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		2e-07
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		2e-07
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-07
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		2e-07
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		2e-07
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-07
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		3e-07
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		3e-07
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-07
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		3e-07
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		3e-07
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		3e-07
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		3e-07
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		3e-07
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		3e-07
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		3e-07
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		3e-07
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		3e-07
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		4e-07
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-07
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		4e-07
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		4e-07
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		4e-07
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		4e-07
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		4e-07
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		4e-07
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		5e-07
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		5e-07
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		5e-07
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		5e-07
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		5e-07
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		5e-07
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		5e-07
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		5e-07
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		5e-07
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		5e-07
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		6e-07
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		6e-07
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		6e-07
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		6e-07
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		6e-07
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		7e-07
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		7e-07
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		8e-07
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		8e-07
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		8e-07
2oza_B	366	Structure Of P38alpha Complex Length = 366		8e-07
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		9e-07
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		9e-07
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		9e-07
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		9e-07
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		9e-07
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		9e-07
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		9e-07
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		9e-07
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		9e-07
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-06
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		1e-06
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		1e-06
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		1e-06
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		1e-06
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		1e-06
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-06
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-06
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		1e-06
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		1e-06
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		1e-06
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		1e-06
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		1e-06
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		1e-06
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		1e-06
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		1e-06
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		1e-06
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-06
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		1e-06
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		1e-06
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		1e-06
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		1e-06
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-06
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		1e-06
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		1e-06
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		1e-06
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-06
3hec_A	348	P38 In Complex With Imatinib Length = 348		1e-06
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		1e-06
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		1e-06
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-06
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		1e-06
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-06
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		1e-06
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		1e-06
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		1e-06
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		1e-06
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		1e-06
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-06
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		1e-06
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		1e-06
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		1e-06
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-06
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		1e-06
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		1e-06
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		1e-06
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		1e-06
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		1e-06
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		1e-06
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		1e-06
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-06
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		2e-06
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		2e-06
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		2e-06
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		2e-06
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		2e-06
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-06
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-06
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		2e-06
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		2e-06
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		2e-06
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		2e-06
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		2e-06
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		2e-06
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-06
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		2e-06
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		2e-06
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-06
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		2e-06
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		2e-06
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		2e-06
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		2e-06
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		2e-06
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		2e-06
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-06
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		2e-06
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-06
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		2e-06
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		2e-06
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		2e-06
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		2e-06
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		2e-06
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-06
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		2e-06
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		2e-06
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		2e-06
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		2e-06
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		2e-06
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		2e-06
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		2e-06
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		2e-06
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-06
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		2e-06
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		2e-06
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		2e-06
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		2e-06
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		2e-06
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		2e-06
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-06
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		2e-06
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-06
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		2e-06
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		2e-06
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-06
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-06
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		2e-06
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		2e-06
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		3e-06
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		3e-06
4fl2_A	636	Structural And Biophysical Characterization Of The		3e-06
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		3e-06
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-06
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		3e-06
4fl3_A	635	Structural And Biophysical Characterization Of The		3e-06
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		3e-06
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		3e-06
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		3e-06
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		3e-06
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		3e-06
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		3e-06
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		3e-06
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-06
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		3e-06
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		3e-06
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		3e-06
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		3e-06
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		3e-06
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		3e-06
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		3e-06
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-06
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		3e-06
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		3e-06
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		3e-06
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		3e-06
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		3e-06
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-06
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		3e-06
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		4e-06
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		4e-06
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		4e-06
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		4e-06
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		4e-06
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		4e-06
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		4e-06
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		4e-06
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		4e-06
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		4e-06
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		4e-06
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-06
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		4e-06
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		5e-06
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		5e-06
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		5e-06
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		5e-06
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		5e-06
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		5e-06
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		5e-06
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		5e-06
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		5e-06
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		5e-06
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		5e-06
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		6e-06
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		6e-06
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		6e-06
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		6e-06
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		6e-06
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		6e-06
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		6e-06
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		6e-06
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		6e-06
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		6e-06
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		6e-06
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		6e-06
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		7e-06
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		7e-06
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		7e-06
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		7e-06
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		7e-06
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		7e-06
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		7e-06
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		7e-06
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		7e-06
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		7e-06
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		8e-06
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		8e-06
4exu_A	371	Mapk13, Inactive Form Length = 371		8e-06
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		8e-06
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		8e-06
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		8e-06
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		9e-06
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		9e-06
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		9e-06
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		9e-06
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		9e-06
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		9e-06
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		9e-06
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		1e-05
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		1e-05
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-05
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		1e-05
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		1e-05
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		1e-05
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		1e-05
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		1e-05
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		1e-05
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		1e-05
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		1e-05
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		1e-05
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-05
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		1e-05
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		1e-05
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		1e-05
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		1e-05
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		1e-05
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-05
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		1e-05
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		1e-05
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		1e-05
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		1e-05
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		1e-05
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		1e-05
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		1e-05
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		1e-05
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-05
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		1e-05
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-05
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		2e-05
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-05
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		2e-05
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-05
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		2e-05
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		2e-05
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		2e-05
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-05
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		2e-05
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		2e-05
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		2e-05
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-05
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		2e-05
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		2e-05
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		2e-05
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		2e-05
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-05
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		2e-05
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		2e-05
4h58_A	275	Braf In Complex With Compound 3 Length = 275		2e-05
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		2e-05
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		2e-05
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		2e-05
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		2e-05
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		3e-05
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		3e-05
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		3e-05
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		3e-05
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		3e-05
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		3e-05
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		3e-05
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		3e-05
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-05
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		4e-05
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		4e-05
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		4e-05
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-05
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		4e-05
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		4e-05
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		4e-05
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		4e-05
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		4e-05
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		4e-05
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		4e-05
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		4e-05
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		4e-05
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-05
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		4e-05
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		4e-05
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		4e-05
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-05
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		4e-05
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		4e-05
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		5e-05
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		5e-05
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		5e-05
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		6e-05
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		6e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		6e-05
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		6e-05
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		7e-05
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		7e-05
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		7e-05
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		7e-05
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		7e-05
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		7e-05
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		7e-05
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		7e-05
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		7e-05
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		7e-05
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		7e-05
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		7e-05
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		7e-05
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		7e-05
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		7e-05
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		7e-05
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		7e-05
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		7e-05
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		7e-05
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		8e-05
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		8e-05
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		8e-05
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		8e-05
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		9e-05
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		9e-05
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		9e-05
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		9e-05
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		1e-04
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		1e-04
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		1e-04
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		1e-04
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		1e-04
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		1e-04
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		1e-04
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		1e-04
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		1e-04
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		1e-04
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		1e-04
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		1e-04
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		1e-04
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		1e-04
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		1e-04
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		1e-04
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		1e-04
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		1e-04
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		1e-04
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		1e-04
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		1e-04
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		1e-04
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		1e-04
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		1e-04
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		1e-04
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		1e-04
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		1e-04
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		1e-04
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		1e-04
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		1e-04
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		2e-04
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		2e-04
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		2e-04
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-04
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		2e-04
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-04
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		2e-04
1u59_A	287	Crystal Structure Of The Zap-70 Kinase Domain In Co		2e-04
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		2e-04
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		2e-04
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		2e-04
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		2e-04
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		2e-04
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		3e-04
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		3e-04
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		3e-04
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		3e-04
2ozo_A	613	Autoinhibited Intact Human Zap-70 Length = 613		3e-04
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		3e-04
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		4e-04
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		4e-04
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		4e-04
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		4e-04
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		5e-04
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		5e-04
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		5e-04
4gt4_A	308	Structure Of Unliganded, Inactive Ror2 Kinase Domai		5e-04
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		5e-04
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		5e-04
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		5e-04
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		6e-04
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		6e-04
3zzw_A	289	Crystal Structure Of The Kinase Domain Of Ror2 Leng		6e-04
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		6e-04
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		6e-04
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		6e-04
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		6e-04
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		6e-04
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		6e-04
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		6e-04
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		6e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		6e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		6e-04
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		6e-04
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		6e-04
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		6e-04
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		6e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		6e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		6e-04
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		6e-04
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		6e-04
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		6e-04
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		6e-04
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		6e-04
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		6e-04
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		6e-04
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		7e-04
3tl8_A	349	The Avrptob-Bak1 Complex Reveals Two Structurally S		7e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		7e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		8e-04

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 96.3 bits (238), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 13/154 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++ E   VLK+ DFGFA+  T Q+   T C +P Y+APE++   KYD   D+WS+
Sbjct: 138 ENLLYTSKEKDAVLKLTDFGFAKETT-QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSL 196
Query: 74  GAILFQLVTGKPPFDGSNQLQL---FQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           G I++ L+ G PPF  +    +    +  +   +  FP     E+  D   L R LL+ +
Sbjct: 197 GVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTD 256
Query: 131 PVERITFKEFFNHRFLGELRQTVHAEQHSVVPET 164
           P ER+T  +F NH ++          Q  VVP+T
Sbjct: 257 PTERLTITQFMNHPWIN---------QSMVVPQT 281

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 82/154 (53%), Gaps = 13/154 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++ E   VLK+ DFGFA+  T Q+   T C +P Y+APE++   KYD   D+WS+
Sbjct: 157 ENLLYTSKEKDAVLKLTDFGFAKETT-QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSL 215
Query: 74  GAILFQLVTGKPPFDGSNQLQL---FQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           G I++ L+ G PPF  +    +    +  +   +  FP     E+  D   L R LL+ +
Sbjct: 216 GVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTD 275
Query: 131 PVERITFKEFFNHRFLGELRQTVHAEQHSVVPET 164
           P ER+T  +F NH ++          Q  VVP+T
Sbjct: 276 PTERLTITQFMNHPWIN---------QSMVVPQT 300

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 95.5 bits (236), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++     +LK+ DFGFA+  T  +   T C +P Y+APE++   KYD   D+WS+
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 249
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTEL---RFPPGAIEELHPDCVDLCRCLLRQN 130
           G I++ L+ G PPF  ++ L +   + T   +    FP     E+  +   L R LL+  
Sbjct: 250 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 309
Query: 131 PVERITFKEFFNHRFL 146
           P +R+T  EF NH ++
Sbjct: 310 PTQRMTITEFMNHPWI 325

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 95.5 bits (236), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++     +LK+ DFGFA+  T  +   T C +P Y+APE++   KYD   D+WS+
Sbjct: 196 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 255
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTEL---RFPPGAIEELHPDCVDLCRCLLRQN 130
           G I++ L+ G PPF  ++ L +   + T   +    FP     E+  +   L R LL+  
Sbjct: 256 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 315
Query: 131 PVERITFKEFFNHRFL 146
           P +R+T  EF NH ++
Sbjct: 316 PTQRMTITEFMNHPWI 331

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 95.5 bits (236), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++     +LK+ DFGFA+  T  +   T C +P Y+APE++   KYD   D+WS+
Sbjct: 146 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTEL---RFPPGAIEELHPDCVDLCRCLLRQN 130
           G I++ L+ G PPF  ++ L +   + T   +    FP     E+  +   L R LL+  
Sbjct: 206 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 265
Query: 131 PVERITFKEFFNHRFL 146
           P +R+T  EF NH ++
Sbjct: 266 PTQRMTITEFMNHPWI 281

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 95.5 bits (236), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++     +LK+ DFGFA+  T  +   T C +P Y+APE++   KYD   D+WS+
Sbjct: 160 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 219
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTEL---RFPPGAIEELHPDCVDLCRCLLRQN 130
           G I++ L+ G PPF  ++ L +   + T   +    FP     E+  +   L R LL+  
Sbjct: 220 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 279
Query: 131 PVERITFKEFFNHRFL 146
           P +R+T  EF NH ++
Sbjct: 280 PTQRMTITEFMNHPWI 295

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 95.5 bits (236), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++     +LK+ DFGFA+  T  +   T C +P Y+APE++   KYD   D+WS+
Sbjct: 144 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTEL---RFPPGAIEELHPDCVDLCRCLLRQN 130
           G I++ L+ G PPF  ++ L +   + T   +    FP     E+  +   L R LL+  
Sbjct: 204 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 263
Query: 131 PVERITFKEFFNHRFL 146
           P +R+T  EF NH ++
Sbjct: 264 PTQRMTITEFMNHPWI 279

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 95.5 bits (236), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++     +LK+ DFGFA+  T  +   T C +P Y+APE++   KYD   D+WS+
Sbjct: 146 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 205
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTEL---RFPPGAIEELHPDCVDLCRCLLRQN 130
           G I++ L+ G PPF  ++ L +   + T   +    FP     E+  +   L R LL+  
Sbjct: 206 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 265
Query: 131 PVERITFKEFFNHRFL 146
           P +R+T  EF NH ++
Sbjct: 266 PTQRMTITEFMNHPWI 281

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++     +LK+ DFGFA+  T  +   T C +P Y+APE++   KYD   D+WS+
Sbjct: 152 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 211
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTEL---RFPPGAIEELHPDCVDLCRCLLRQN 130
           G I++ L+ G PPF  ++ L +   + T   +    FP     E+  +   L R LL+  
Sbjct: 212 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 271
Query: 131 PVERITFKEFFNHRFL 146
           P +R+T  EF NH ++
Sbjct: 272 PTQRMTITEFMNHPWI 287

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++     +LK+ DFGFA+  T  +   T C +P Y+APE++   KYD   D+WS+
Sbjct: 145 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 204
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTEL---RFPPGAIEELHPDCVDLCRCLLRQN 130
           G I++ L+ G PPF  ++ L +   + T   +    FP     E+  +   L R LL+  
Sbjct: 205 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 264
Query: 131 PVERITFKEFFNHRFL 146
           P +R+T  EF NH ++
Sbjct: 265 PTQRMTITEFMNHPWI 280

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 95.1 bits (235), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++     +LK+ DFGFA+  T  +   T C +P Y+APE++   KYD   D+WS+
Sbjct: 151 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 210
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTEL---RFPPGAIEELHPDCVDLCRCLLRQN 130
           G I++ L+ G PPF  ++ L +   + T   +    FP     E+  +   L R LL+  
Sbjct: 211 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 270
Query: 131 PVERITFKEFFNHRFL 146
           P +R+T  EF NH ++
Sbjct: 271 PTQRMTITEFMNHPWI 286

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 95.1 bits (235), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++     +LK+ DFGFA+  T  +   T C +P Y+APE++   KYD   D+WS+
Sbjct: 150 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 209
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTEL---RFPPGAIEELHPDCVDLCRCLLRQN 130
           G I++ L+ G PPF  ++ L +   + T   +    FP     E+  +   L R LL+  
Sbjct: 210 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 269
Query: 131 PVERITFKEFFNHRFL 146
           P +R+T  EF NH ++
Sbjct: 270 PTQRMTITEFMNHPWI 285

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 2   CYVFMIVSAN-ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ 60
           C+   IV  +   +NLL+  +     +KI DFGF+   T     DT CGSP Y APE+ Q
Sbjct: 127 CHQKRIVHRDLKAENLLLDAD---MNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQ 183
Query: 61  NHKYDA-KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC 119
             KYD  + D+WS+G IL+ LV+G  PFDG N  +L + +L   + R P      +  DC
Sbjct: 184 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG-KYRIPF----YMSTDC 238
Query: 120 VDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVE 169
            +L +  L  NP++R T ++    R++       H E      E KP VE
Sbjct: 239 ENLLKRFLVLNPIKRGTLEQIMKDRWI----NAGHEED-----ELKPFVE 279

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++     +LK+ DFGFA+  T  +     C +P Y+APE++   KYD   D+WS+
Sbjct: 144 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSL 203
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTEL---RFPPGAIEELHPDCVDLCRCLLRQN 130
           G I++ L+ G PPF  ++ L +   + T   +    FP     E+  +   L R LL+  
Sbjct: 204 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 263
Query: 131 PVERITFKEFFNHRFL 146
           P +R+T  EF NH ++
Sbjct: 264 PTQRMTITEFMNHPWI 279

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 93.2 bits (230), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 87/168 (51%), Gaps = 15/168 (8%)
Query: 2   CYVFMIVSAN-ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ 60
           C+   IV  +   +NLL+  +     +KI DFGF+   T  +  DT CGSP Y APE+ Q
Sbjct: 129 CHQKFIVHRDLKAENLLLDAD---MNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ 185
Query: 61  NHKYDA-KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC 119
             KYD  + D+WS+G IL+ LV+G  PFDG N  +L + +L   + R P      +  DC
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG-KYRIPF----YMSTDC 240
Query: 120 VDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPM 167
            +L +  L  NP +R T ++    R++      V  E   + P  +P+
Sbjct: 241 ENLLKKFLILNPSKRGTLEQIMKDRWM-----NVGHEDDELKPYVEPL 283

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 92.8 bits (229), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 87/168 (51%), Gaps = 15/168 (8%)
Query: 2   CYVFMIVSAN-ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ 60
           C+   IV  +   +NLL+  +     +KI DFGF+   T  +  DT CGSP Y APE+ Q
Sbjct: 129 CHQKFIVHRDLKAENLLLDAD---MNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ 185
Query: 61  NHKYDA-KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC 119
             KYD  + D+WS+G IL+ LV+G  PFDG N  +L + +L   + R P      +  DC
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG-KYRIPF----YMSTDC 240
Query: 120 VDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPM 167
            +L +  L  NP +R T ++    R++      V  E   + P  +P+
Sbjct: 241 ENLLKKFLILNPSKRGTLEQIMKDRWM-----NVGHEDDELKPYVEPL 283

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 87/168 (51%), Gaps = 15/168 (8%)
Query: 2   CYVFMIVSAN-ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ 60
           C+   IV  +   +NLL+  +     +KI DFGF+   T  +  DT CGSP Y APE+ Q
Sbjct: 122 CHQKFIVHRDLKAENLLLDAD---MNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ 178
Query: 61  NHKYDA-KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC 119
             KYD  + D+WS+G IL+ LV+G  PFDG N  +L + +L   + R P      +  DC
Sbjct: 179 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG-KYRIPF----YMSTDC 233
Query: 120 VDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPM 167
            +L +  L  NP +R T ++    R++      V  E   + P  +P+
Sbjct: 234 ENLLKKFLILNPSKRGTLEQIMKDRWM-----NVGHEDDELKPYVEPL 276

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 92.4 bits (228), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 2   CYVFMIVSAN-ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ 60
           C+   IV  +   +NLL+  +     +KI DFGF+   T  +  DT CGSP Y APE+ Q
Sbjct: 129 CHQKFIVHRDLKAENLLLDAD---MNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ 185
Query: 61  NHKYDA-KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC 119
             KYD  + D+WS+G IL+ LV+G  PFDG N  +L + +L   + R P      +  DC
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG-KYRIPF----YMSTDC 240
Query: 120 VDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPM 167
            +L +  L  NP +R T ++    R++      V  E   + P   P+
Sbjct: 241 ENLLKKFLILNPSKRGTLEQIMKDRWM-----NVGHEDDELKPYVAPL 283

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 53/144 (36%), Positives = 75/144 (52%), Gaps = 15/144 (10%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDA-KADLWSVGAILFQLVTGKP 85
           +KI DFGF+   T     D  CG+P Y APE+ Q  KYD  + D+WS+G IL+ LV+G  
Sbjct: 153 IKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 212
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           PFDG N  +L + +L   + R P      +  DC +L +  L  NP++R T ++    R+
Sbjct: 213 PFDGQNLKELRERVLRG-KYRIPF----YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRW 267
Query: 146 LGELRQTVHAEQHSVVPETKPMVE 169
           +       H E      E KP VE
Sbjct: 268 I----NAGHEED-----ELKPFVE 282

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 3/138 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++     +LK+ DFGFA+  T  +   T C +P Y+APE++   KYD   D WS+
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSL 249
Query: 74  GAILFQLVTGKPPFDGSNQLQL---FQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           G I + L+ G PPF  ++ L +    +  +   +  FP     E+  +   L R LL+  
Sbjct: 250 GVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTE 309
Query: 131 PVERITFKEFFNHRFLGE 148
           P +R T  EF NH ++ +
Sbjct: 310 PTQRXTITEFXNHPWIXQ 327

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 90.9 bits (224), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 2   CYVFMIVSAN-ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ 60
           C+   IV  +   +NLL+  +     +KI DFGF+   T  +  D  CGSP Y APE+ Q
Sbjct: 129 CHQKFIVHRDLKAENLLLDAD---MNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQ 185
Query: 61  NHKYDA-KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC 119
             KYD  + D+WS+G IL+ LV+G  PFDG N  +L + +L   + R P      +  DC
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG-KYRIPF----YMSTDC 240
Query: 120 VDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPM 167
            +L +  L  NP +R T ++    R++      V  E   + P  +P+
Sbjct: 241 ENLLKKFLILNPSKRGTLEQIMKDRWM-----NVGHEDDELKPYVEPL 283

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 90.1 bits (222), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 15/168 (8%)
Query: 2   CYVFMIVSAN-ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ 60
           C+   IV  +   +NLL+  +     +KI DFGF+   T  +  D  CG+P Y APE+ Q
Sbjct: 129 CHQKFIVHRDLKAENLLLDAD---MNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQ 185
Query: 61  NHKYDA-KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC 119
             KYD  + D+WS+G IL+ LV+G  PFDG N  +L + +L   + R P      +  DC
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG-KYRIPF----YMSTDC 240
Query: 120 VDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPM 167
            +L +  L  NP +R T ++    R++      V  E   + P  +P+
Sbjct: 241 ENLLKKFLILNPSKRGTLEQIMKDRWM-----NVGHEDDELKPYVEPL 283

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/141 (37%), Positives = 79/141 (56%), Gaps = 11/141 (7%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDA-KADLWSVGAILFQLVTGKP 85
           +KI DFGF+   T  +  DT CGSP Y APE+ Q  KYD  + D+WS+G IL+ LV+G  
Sbjct: 153 IKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 212
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           PFDG N  +L + +L   + R P      +  DC +L + LL  NP++R + ++    R+
Sbjct: 213 PFDGQNLKELRERVLRG-KYRIPF----YMSTDCENLLKKLLVLNPIKRGSLEQIMKDRW 267
Query: 146 LGELRQTVHAEQHSVVPETKP 166
           +      V  E+  + P T+P
Sbjct: 268 M-----NVGHEEEELKPYTEP 283

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 84/168 (50%), Gaps = 15/168 (8%)
Query: 2   CYVFMIVSAN-ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ 60
           C+   IV  +   +NLL+  +     +KI DFGF+   T  +  D  CG+P Y APE+ Q
Sbjct: 129 CHQKFIVHRDLKAENLLLDADXN---IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQ 185
Query: 61  NHKYDA-KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC 119
             KYD  + D+WS+G IL+ LV+G  PFDG N  +L + +L   + R P         DC
Sbjct: 186 GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG-KYRIPFYX----STDC 240
Query: 120 VDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPM 167
            +L +  L  NP +R T ++    R+       V  E   + P  +P+
Sbjct: 241 ENLLKKFLILNPSKRGTLEQIXKDRW-----XNVGHEDDELKPYVEPL 283

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEI---IQNHKYDAKADL 70
           +N+L+S+ E   ++KI DFG ++ L    L  TLCG+P Y+APE+   +    Y+   D 
Sbjct: 149 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 208
Query: 71  WSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           WS+G ILF  ++G PPF         ++ +TS +  F P    E+    +DL + LL  +
Sbjct: 209 WSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD 268
Query: 131 PVERITFKEFFNHRFL 146
           P  R T +E   H +L
Sbjct: 269 PKARFTTEEALRHPWL 284

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEI---IQNHKYDAKADL 70
           +N+L+S+ E   ++KI DFG ++ L    L  TLCG+P Y+APE+   +    Y+   D 
Sbjct: 143 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 202
Query: 71  WSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           WS+G ILF  ++G PPF         ++ +TS +  F P    E+    +DL + LL  +
Sbjct: 203 WSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD 262
Query: 131 PVERITFKEFFNHRFL 146
           P  R T +E   H +L
Sbjct: 263 PKARFTTEEALRHPWL 278

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEI---IQNHKYDAKADL 70
           +N+L+S+ E   ++KI DFG ++ L    L  TLCG+P Y+APE+   +    Y+   D 
Sbjct: 143 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 202
Query: 71  WSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           WS+G ILF  ++G PPF         ++ +TS +  F P    E+    +DL + LL  +
Sbjct: 203 WSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD 262
Query: 131 PVERITFKEFFNHRFL 146
           P  R T +E   H +L
Sbjct: 263 PKARFTTEEALRHPWL 278

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEI---IQNHKYDAKADL 70
           +N+L+S+ E   ++KI DFG ++ L    L  TLCG+P Y+APE+   +    Y+   D 
Sbjct: 143 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 202
Query: 71  WSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           WS+G ILF  ++G PPF         ++ +TS +  F P    E+    +DL + LL  +
Sbjct: 203 WSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD 262
Query: 131 PVERITFKEFFNHRFL 146
           P  R T +E   H +L
Sbjct: 263 PKARFTTEEALRHPWL 278

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEI---IQNHKYDAKADL 70
           +N+L+S+ E   ++KI DFG ++ L    L  TLCG+P Y+APE+   +    Y+   D 
Sbjct: 142 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 201
Query: 71  WSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           WS+G ILF  ++G PPF         ++ +TS +  F P    E+    +DL + LL  +
Sbjct: 202 WSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD 261
Query: 131 PVERITFKEFFNHRFL 146
           P  R T +E   H +L
Sbjct: 262 PKARFTTEEALRHPWL 277

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 86.3 bits (212), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEI---IQNHKYDAKADL 70
           +N+L+S+ E   ++KI DFG ++ L    L  TLCG+P Y+APE+   +    Y+   D 
Sbjct: 282 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 341
Query: 71  WSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           WS+G ILF  ++G PPF         ++ +TS +  F P    E+    +DL + LL  +
Sbjct: 342 WSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD 401
Query: 131 PVERITFKEFFNHRFL 146
           P  R T +E   H +L
Sbjct: 402 PKARFTTEEALRHPWL 417

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 85.9 bits (211), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEI---IQNHKYDAKADL 70
           +N+L+S+ E   ++KI DFG ++ L    L  TLCG+P Y+APE+   +    Y+   D 
Sbjct: 268 ENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 327
Query: 71  WSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           WS+G ILF  ++G PPF         ++ +TS +  F P    E+    +DL + LL  +
Sbjct: 328 WSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVD 387
Query: 131 PVERITFKEFFNHRFL 146
           P  R T +E   H +L
Sbjct: 388 PKARFTTEEALRHPWL 403

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 85.5 bits (210), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 54/161 (33%), Positives = 85/161 (52%), Gaps = 6/161 (3%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           +N+L+++ E +  +K+GDFG A  L    L A    G+P +MAPE+++   Y    D+W 
Sbjct: 159 ENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWG 218
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
            G ILF L++G  PF G+ + +LF+ I+   + +  P     +     DL R +L  +P 
Sbjct: 219 CGVILFILLSGCLPFYGTKE-RLFEGIIKG-KYKMNPRQWSHISESAKDLVRRMLMLDPA 276
Query: 133 ERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNS 173
           ERIT  E  NH +L E R     + H  +PET   +   N+
Sbjct: 277 ERITVYEALNHPWLKE-RDRYAYKIH--LPETVEQLRKFNA 314

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 83.6 bits (205), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL  + +    + I DFG ++     D+  T CG+P Y+APE++    Y    D WS+
Sbjct: 149 ENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSI 208
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G I + L+ G PPF   N  +LF+ IL + E  F     +++     D  R L+ ++P +
Sbjct: 209 GVIAYILLCGYPPFYDENDSKLFEQILKA-EYEFDSPYWDDISDSAKDFIRNLMEKDPNK 267
Query: 134 RITFKEFFNHRFLG---ELRQTVH 154
           R T ++   H ++     L + +H
Sbjct: 268 RYTCEQAARHPWIAGDTALNKNIH 291

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 83.2 bits (204), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P    DTLCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 148 LKIADFGWSVH-APSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 207 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 261

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL  + +    + I DFG ++   P  +  T CG+P Y+APE++    Y    D WS+
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSI 204
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G I + L+ G PPF   N  +LF+ IL + E  F     +++     D  R L+ ++P +
Sbjct: 205 GVIAYILLCGYPPFYDENDAKLFEQILKA-EYEFDSPYWDDISDSAKDFIRHLMEKDPEK 263
Query: 134 RITFKEFFNHRFLG 147
           R T ++   H ++ 
Sbjct: 264 RFTCEQALQHPWIA 277

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL  + +    + I DFG ++   P  +  T CG+P Y+APE++    Y    D WS+
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSI 204
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G I + L+ G PPF   N  +LF+ IL + E  F     +++     D  R L+ ++P +
Sbjct: 205 GVIAYILLCGYPPFYDENDAKLFEQILKA-EYEFDSPYWDDISDSAKDFIRHLMEKDPEK 263
Query: 134 RITFKEFFNHRFL 146
           R T ++   H ++
Sbjct: 264 RFTCEQALQHPWI 276

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 82.8 bits (203), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL  + +    + I DFG ++   P  +  T CG+P Y+APE++    Y    D WS+
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSI 204
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G I + L+ G PPF   N  +LF+ IL + E  F     +++     D  R L+ ++P +
Sbjct: 205 GVIAYILLCGYPPFYDENDAKLFEQILKA-EYEFDSPYWDDISDSAKDFIRHLMEKDPEK 263
Query: 134 RITFKEFFNHRFLG 147
           R T ++   H ++ 
Sbjct: 264 RFTCEQALQHPWIA 277

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 82.4 bits (202), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL  + +    + I DFG ++   P  +  T CG+P Y+APE++    Y    D WS+
Sbjct: 145 ENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSI 204
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G I + L+ G PPF   N  +LF+ IL + E  F     +++     D  R L+ ++P +
Sbjct: 205 GVIAYILLCGYPPFYDENDAKLFEQILKA-EYEFDSPYWDDISDSAKDFIRHLMEKDPEK 263
Query: 134 RITFKEFFNHRFLG 147
           R T ++   H ++ 
Sbjct: 264 RFTCEQALQHPWIA 277

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 9/130 (6%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+ +N     LKI DFG++    P    DTLCG+  Y+ PE+I+   +D K DLWS+
Sbjct: 141 ENLLLGSN---GELKIADFGWSVH-APSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSL 196
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G + ++ + G PPF+     + ++ I +  E  FP    E       DL   LL+ N  +
Sbjct: 197 GVLCYEFLVGMPPFEAHTYQETYRRI-SRVEFTFPDFVTE----GARDLISRLLKHNASQ 251
Query: 134 RITFKEFFNH 143
           R+T  E   H
Sbjct: 252 RLTLAEVLEH 261

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           +NLL+++      +K+ DFG A  +   Q       G+P Y++PE+++   Y    D+W+
Sbjct: 132 ENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWA 191
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
            G IL+ L+ G PPF   +Q +L+Q I  +    FP    + + P+  DL   +L  NP 
Sbjct: 192 CGVILYILLVGYPPFWDEDQHRLYQQI-KAGAYDFPSPEWDTVTPEAKDLINKMLTINPA 250
Query: 133 ERITFKEFFNHRFLGELRQTVHAEQH 158
           +RIT  E   H ++ + R TV +  H
Sbjct: 251 KRITASEALKHPWICQ-RSTVASMMH 275

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 81.3 bits (199), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  +       T CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 288 IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 347
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 348 PFYNQDHEKLFELILME-EIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEI 402
Query: 141 FNHRFLGELRQTVHAEQHSVVPETKPMV 168
             HRF   +    H  +  + P  KP V
Sbjct: 403 MQHRFFAGIVWQ-HVYEKKLSPPFKPQV 429

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  +       T CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 291 IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 350
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 351 PFYNQDHEKLFELILME-EIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEI 405
Query: 141 FNHRFLGELRQTVHAEQHSVVPETKPMV 168
             HRF   +    H  +  + P  KP V
Sbjct: 406 MQHRFFAGIVWQ-HVYEKKLSPPFKPQV 432

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P    D LCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 173 LKIADFGWSVH-APSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 232 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 286

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           +NLL+++      +K+ DFG A  +   Q       G+P Y++PE+++   Y    D+W+
Sbjct: 132 ENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWA 191
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
            G IL+ L+ G PPF   +Q +L+Q I  +    FP    + + P+  DL   +L  NP 
Sbjct: 192 CGVILYILLVGYPPFWDEDQHRLYQQI-KAGAYDFPSPEWDTVTPEAKDLINKMLTINPA 250
Query: 133 ERITFKEFFNHRFLGELRQTVHAEQH 158
           +RIT  E   H ++ + R TV +  H
Sbjct: 251 KRITASEALKHPWICQ-RSTVASMMH 275

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P     TLCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 164 LKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 223 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 277

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P     TLCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 173 LKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 232 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 286

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P     TLCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 152 LKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 211 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P     TLCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 150 LKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 209 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P     TLCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 152 LKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 211 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P    D LCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 150 LKIADFGWSVH-APSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 209 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P     TLCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 151 LKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 209
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 210 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 264

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P     TLCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 146 LKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 204
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 205 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 259

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P     TLCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 147 LKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 206 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P     TLCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 150 LKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H
Sbjct: 209 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEH 260

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 80.1 bits (196), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           +L+++ E +  +K+G FG A  L    L A    G+P +MAPE+++   Y    D+W  G
Sbjct: 163 VLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCG 222
Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
            ILF L++G  PF G+ + +LF+ I+   + +  P     +     DL R +L  +P ER
Sbjct: 223 VILFILLSGCLPFYGTKE-RLFEGIIKG-KYKMNPRQWSHISESAKDLVRRMLMLDPAER 280
Query: 135 ITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNS 173
           IT  E  NH +L E R     + H  +PET   +   N+
Sbjct: 281 ITVYEALNHPWLKE-RDRYAYKIH--LPETVEQLRKFNA 316

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/159 (31%), Positives = 81/159 (50%), Gaps = 4/159 (2%)
Query: 2   CYVFMIVSAN-ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD-TLCGSPLYMAPEII 59
           C+   +V  N   +NLL+++      +K+ DFG A  +  +  A     G+P Y++PE++
Sbjct: 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVL 185
Query: 60  QNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC 119
           +   Y    DLW+ G IL+ L+ G PPF   +Q +L+Q I  +    FP    + + P+ 
Sbjct: 186 RKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI-KAGAYDFPSPEWDTVTPEA 244
Query: 120 VDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQH 158
            DL   +L  NP +RIT  E   H ++   R TV +  H
Sbjct: 245 KDLINKMLTINPSKRITAAEALKHPWISH-RSTVASCMH 282

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P     TLCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 144 LKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H
Sbjct: 203 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEH 254

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P     TLCG+  Y+ PE I+   +D K DLWS+G + ++ + GKPP
Sbjct: 152 LKIADFGWSVH-APSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPP 210
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 211 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPXLREVLEHPWI 265

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD-TLCGSPLYMAPEIIQNHKYDAKADLWS 72
           +NLL+++      +K+ DFG A  +  +  A     G+P Y++PE+++   Y    DLW+
Sbjct: 150 ENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWA 209
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
            G IL+ L+ G PPF   +Q +L+Q I  +    FP    + + P+  DL   +L  NP 
Sbjct: 210 CGVILYILLVGYPPFWDEDQHRLYQQI-KAGAYDFPSPEWDTVTPEAKDLINKMLTINPS 268
Query: 133 ERITFKEFFNHRFLGELRQTVHAEQH 158
           +RIT  E   H ++   R TV +  H
Sbjct: 269 KRITAAEALKHPWISH-RSTVASCMH 293

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 12/148 (8%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  ++      T CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 144 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 204 PFYNQDHERLFELILME-EIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 258
Query: 141 FNHRFLGELRQTVHAEQHSVVPETKPMV 168
             HRF   +       Q  ++P  KP V
Sbjct: 259 MEHRFFLSINWQ-DVVQKKLLPPFKPQV 285

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 12/148 (8%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  ++      T CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 144 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 204 PFYNQDHERLFELILME-EIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 258
Query: 141 FNHRFLGELRQTVHAEQHSVVPETKPMV 168
             HRF   +       Q  ++P  KP V
Sbjct: 259 MEHRFFLSINWQ-DVVQKKLLPPFKPQV 285

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 12/148 (8%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  ++      T CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 147 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 206
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 207 PFYNQDHERLFELILME-EIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 261
Query: 141 FNHRFLGELRQTVHAEQHSVVPETKPMV 168
             HRF   +       Q  ++P  KP V
Sbjct: 262 MEHRFFLSINWQ-DVVQKKLLPPFKPQV 288

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 6/159 (3%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           +L+++ E +  +K+G FG A  L    L A    G+P +MAPE+++   Y    D+W  G
Sbjct: 161 VLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCG 220
Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
            ILF L++G  PF G+ + +LF+ I+   + +  P     +     DL R +L  +P ER
Sbjct: 221 VILFILLSGCLPFYGTKE-RLFEGIIKG-KYKMNPRQWSHISESAKDLVRRMLMLDPAER 278
Query: 135 ITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNS 173
           IT  E  NH +L E R     + H  +PET   +   N+
Sbjct: 279 ITVYEALNHPWLKE-RDRYAYKIH--LPETVEQLRKFNA 314

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 79.3 bits (194), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  +         CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 149 IKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 208
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 209 PFYNQDHEKLFELILME-EIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEI 263
Query: 141 FNHRFLGELRQTVHAEQHSVVPETKPMV 168
             HRF   +    H  +  + P  KP V
Sbjct: 264 MQHRFFAGIVWQ-HVYEKKLSPPFKPQV 290

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 78/145 (53%), Gaps = 3/145 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL +T      LKI DFG ++ +  Q L  T+CG+P Y APEI++   Y  + D+WSV
Sbjct: 177 ENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSV 236
Query: 74  GAILFQLVTGKPPF-DGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           G I + L+ G  PF D      +F+ IL + E  F     +E+  +  DL R L+  +P 
Sbjct: 237 GIITYILLCGFEPFYDERGDQFMFRRIL-NCEYYFISPWWDEVSLNAKDLVRKLIVLDPK 295
Query: 133 ERITFKEFFNHRFL-GELRQTVHAE 156
           +R+T  +   H ++ G+    VH +
Sbjct: 296 KRLTTFQALQHPWVTGKAANFVHMD 320

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  +         CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 150 IKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 209
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 210 PFYNQDHEKLFELILME-EIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEI 264
Query: 141 FNHRFLGELRQTVHAEQHSVVPETKPMV 168
             HRF   +    H  +  + P  KP V
Sbjct: 265 MQHRFFAGIVWQ-HVYEKKLSPPFKPQV 291

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 75/148 (50%), Gaps = 12/148 (8%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  +         CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 148 IKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 207
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 208 PFYNQDHEKLFELILME-EIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEI 262
Query: 141 FNHRFLGELRQTVHAEQHSVVPETKPMV 168
             HRF   +    H  +  + P  KP V
Sbjct: 263 MQHRFFAGIVWQ-HVYEKKLSPPFKPQV 289

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 79.0 bits (193), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+L+  N     +KI DFGFA+ +   D+   LCG+P Y+APE++    Y+   D WS 
Sbjct: 135 ENILLDKNGH---IKITDFGFAKYVP--DVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSF 189
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G ++++++ G  PF  SN ++ ++ IL + ELRFPP   E    D  DL   L+ ++  +
Sbjct: 190 GILIYEMLAGYTPFYDSNTMKTYEKILNA-ELRFPPFFNE----DVKDLLSRLITRDLSQ 244
Query: 134 RI 135
           R+
Sbjct: 245 RL 246

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 9/130 (6%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+ +N     LKI DFG++    P     TLCG+  Y+ PE+I+   +D K DLWS+
Sbjct: 141 ENLLLGSN---GELKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 196
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G + ++ + G PPF+     + ++ I +  E  FP    E       DL   LL+ N  +
Sbjct: 197 GVLCYEFLVGMPPFEAHTYQETYRRI-SRVEFTFPDFVTE----GARDLISRLLKHNASQ 251
Query: 134 RITFKEFFNH 143
           R+T  E   H
Sbjct: 252 RLTLAEVLEH 261

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 78.6 bits (192), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +K+ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIKVADFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +K+ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIKVADFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI +FG++    P     TLCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 149 LKIANFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 208 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 262

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +K+ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 171 ENLLIDQQ---GYIKVADFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 280
Query: 134 RI 135
           R 
Sbjct: 281 RF 282

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI +FG++    P     TLCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 150 LKIANFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 209 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +K+ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIKVADFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 78.6 bits (192), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +    TLCG+P Y+APEII +  Y+   D W++
Sbjct: 171 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--TLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 280
Query: 134 RI 135
           R 
Sbjct: 281 RF 282

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P      LCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 149 LKIADFGWSVH-APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 207
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 208 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 262

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P      LCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 150 LKIADFGWSVH-APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 209 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P      LCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 152 LKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 211 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P      LCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 150 LKIADFGWSVH-APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 208
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H
Sbjct: 209 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEH 260

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +    TLCG+P Y+APEII +  Y+   D W++
Sbjct: 156 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--TLCGTPEYLAPEIILSKGYNKAVDWWAL 210
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 211 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 265
Query: 134 RI 135
           R 
Sbjct: 266 RF 267

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P      LCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 147 LKIADFGWSVH-APSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 206 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P      LCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 147 LKIADFGWSVH-APSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 206 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P      LCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 147 LKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 206 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P      LCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 147 LKIADFGWSVH-APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 206 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 3/146 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           +NLL+++      +K+ DFG A  +   Q       G+P Y++PE+++   Y    D+W+
Sbjct: 132 ENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWA 191
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
            G IL+ L+ G PPF   +Q +L+Q I  +    FP    + + P+  +L   +L  NP 
Sbjct: 192 CGVILYILLVGYPPFWDEDQHKLYQQI-KAGAYDFPSPEWDTVTPEAKNLINQMLTINPA 250
Query: 133 ERITFKEFFNHRFLGELRQTVHAEQH 158
           +RIT  E   H ++ + R TV +  H
Sbjct: 251 KRITAHEALKHPWVCQ-RSTVASMMH 275

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P      LCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 147 LKIADFGWSVH-APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 206 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P      LCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 148 LKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 207 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 261

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++Q+  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYQMAAGYPPFFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 9/133 (6%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           NLL++ N     +KI DFG A  L  P +   TLCG+P Y++PEI     +  ++D+WS+
Sbjct: 142 NLLLTRN---MNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSL 198
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G + + L+ G+PPFD ++ ++   N +   +   P      L  +  DL   LLR+NP +
Sbjct: 199 GCMFYTLLIGRPPFD-TDTVKNTLNKVVLADYEMPSF----LSIEAKDLIHQLLRRNPAD 253
Query: 134 RITFKEFFNHRFL 146
           R++     +H F+
Sbjct: 254 RLSLSSVLDHPFM 266

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 69/122 (56%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +    TLCG+P Y+APEII +  Y+   D W++
Sbjct: 191 ENLLIDQQ---GYIQVTDFGFAKRV--KGATWTLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 246 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 300
Query: 134 RI 135
           R 
Sbjct: 301 RF 302

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P      LCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 147 LKIADFGWSVH-APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 206 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Query: 27  LKIGDFGFARS-LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  +         CG+P Y+APEII    Y    D W+ G +L++++ G+P
Sbjct: 159 IKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQP 218
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           PFDG ++ +LFQ+I+    + +P    + L  + V +C+ L+ ++P +R+
Sbjct: 219 PFDGEDEDELFQSIMEHN-VSYP----KSLSKEAVSICKGLMTKHPAKRL 263

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 2/136 (1%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+ + E   ++KI DFG +     Q       G+  Y+APE+++  KYD K D+WS+
Sbjct: 165 ENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSI 223
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G ILF L+ G PPF G    ++ + +    +  F     + +     DL + +L+ +   
Sbjct: 224 GVILFILLAGYPPFGGQTDQEILRKV-EKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQR 282
Query: 134 RITFKEFFNHRFLGEL 149
           RI+ ++   H ++ E+
Sbjct: 283 RISAQQALEHPWIKEM 298

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  ++        CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 144 IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 204 PFYNQDHERLFELILME-EIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 258
Query: 141 FNHRFLGELRQTVHAEQHSVVPETKPMV 168
             HRF   +       Q  ++P  KP V
Sbjct: 259 MEHRFFLSINWQ-DVVQKKLLPPFKPQV 285

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  ++        CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 149 IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 208
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 209 PFYNQDHERLFELILME-EIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 263
Query: 141 FNHRFLGELRQTVHAEQHSVVPETKPMV 168
             HRF   +       Q  ++P  KP V
Sbjct: 264 MEHRFFLSINWQ-DVVQKKLLPPFKPQV 290

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  ++        CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 144 IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 204 PFYNQDHERLFELILME-EIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 258
Query: 141 FNHRFLGELRQTVHAEQHSVVPETKPMV 168
             HRF   +       Q  ++P  KP V
Sbjct: 259 MEHRFFLSINWQ-DVVQKKLLPPFKPQV 285

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++G +++++  G PP
Sbjct: 181 IKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F     +Q+++ I+ S ++RFP         D  DL R LL+ +  +R 
Sbjct: 239 FFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  ++        CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 144 IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 204 PFYNQDHERLFELILME-EIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 258
Query: 141 FNHRFLGELRQTVHAEQHSVVPETKPMV 168
             HRF   +       Q  ++P  KP V
Sbjct: 259 MEHRFFLSINWQ-DVVQKKLLPPFKPQV 285

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++G +++++  G PP
Sbjct: 180 IKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F     +Q+++ I+ S ++RFP         D  DL R LL+ +  +R 
Sbjct: 238 FFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++G +++++  G PP
Sbjct: 181 IKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F     +Q+++ I+ S ++RFP         D  DL R LL+ +  +R 
Sbjct: 239 FFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++G +++++  G PP
Sbjct: 180 IKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F     +Q+++ I+ S ++RFP         D  DL R LL+ +  +R 
Sbjct: 238 FFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++G +++++  G PP
Sbjct: 181 IKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F     +Q+++ I+ S ++RFP         D  DL R LL+ +  +R 
Sbjct: 239 FFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++G +++++  G PP
Sbjct: 181 IKVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F     +Q+++ I+ S ++RFP         D  DL R LL+ +  +R 
Sbjct: 239 FFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P      LCG+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 147 LKIADFGWSVH-APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 205
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +     ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 206 FEANTYQDTYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 76.6 bits (187), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P     TL G+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 148 LKIADFGWS-CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 206
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 207 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 261

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 191 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 246 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 300
Query: 134 RI 135
           R 
Sbjct: 301 RF 302

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 171 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTK 280
Query: 134 RI 135
           R 
Sbjct: 281 RF 282

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 76.6 bits (187), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 171 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 280
Query: 134 RI 135
           R 
Sbjct: 281 RF 282

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 171 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 280
Query: 134 RI 135
           R 
Sbjct: 281 RF 282

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 191 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 245
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 246 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 300
Query: 134 RI 135
           R 
Sbjct: 301 RF 302

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 171 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 280
Query: 134 RI 135
           R 
Sbjct: 281 RF 282

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 171 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 280
Query: 134 RI 135
           R 
Sbjct: 281 RF 282

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 171 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 225
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 226 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 280
Query: 134 RI 135
           R 
Sbjct: 281 RF 282

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADEPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 163 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 218 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 272
Query: 134 RI 135
           R 
Sbjct: 273 RF 274

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 163 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 217
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 218 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 272
Query: 134 RI 135
           R 
Sbjct: 273 RF 274

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 165 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 219
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 220 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTK 274
Query: 134 RI 135
           R 
Sbjct: 275 RF 276

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 68/122 (55%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 157 ENLLIDEQ---GYIQVTDFGFAKRVKGRTWX--LCGTPEYLAPEIILSKGYNKAVDWWAL 211
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 212 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTK 266
Query: 134 RI 135
           R 
Sbjct: 267 RF 268

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD-TLCGSPLYMAPEIIQNHKYDAKADLWS 72
           +NLL+++      +K+ DFG A  +  +  A     G+P Y++PE+++   Y    D+W+
Sbjct: 159 ENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWA 218
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
            G IL+ L+ G PPF   +Q +L+Q I  +    FP    + + P+  +L   +L  NP 
Sbjct: 219 CGVILYILLVGYPPFWDEDQHKLYQQI-KAGAYDFPSPEWDTVTPEAKNLINQMLTINPA 277
Query: 133 ERITFKEFFNHRFLGELRQTVHAEQH 158
           +RIT  +   H ++ + R TV +  H
Sbjct: 278 KRITADQALKHPWVCQ-RSTVASMMH 302

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++G +++++  G PP
Sbjct: 180 IQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F     +Q+++ I+ S ++RFP         D  DL R LL+ +  +R 
Sbjct: 238 FFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTKRF 281

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 63/109 (57%), Gaps = 7/109 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++G +++++  G PP
Sbjct: 180 IQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F     +Q+++ I+ S ++RFP         D  DL R LL+ +  +R 
Sbjct: 238 FFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 27  LKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KIGDFG A  +    +   TLCG+P Y+APE++    +  + D+WS+G I++ L+ GKP
Sbjct: 160 VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 219
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           PF+ S   + +  I    E   P    + ++P    L + +L+ +P  R T  E  N  F
Sbjct: 220 PFETSCLKETYLRI-KKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEF 274
Query: 146 L 146
Sbjct: 275 F 275

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 75.5 bits (184), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+ +     ++KI DFG +             G+  Y+APE+++  KYD K D+WS 
Sbjct: 150 ENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSC 208
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L+ G PPF G    ++ + +    +  F P    ++  +   L + +L   P +
Sbjct: 209 GVILYILLCGYPPFGGQTDQEILKRV-EKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSK 267
Query: 134 RITFKEFFNHRFL 146
           RI+ +E  NH ++
Sbjct: 268 RISAEEALNHPWI 280

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 75.5 bits (184), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 27  LKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KIGDFG A  +    +   TLCG+P Y+APE++    +  + D+WS+G I++ L+ GKP
Sbjct: 156 VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           PF+ S   + +  I    E   P    + ++P    L + +L+ +P  R T  E  N  F
Sbjct: 216 PFETSCLKETYLRI-KKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEF 270
Query: 146 L 146
Sbjct: 271 F 271

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 64/121 (52%), Gaps = 6/121 (4%)
Query: 27  LKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KIGDFG A  +    +   TLCG+P Y+APE++    +  + D+WS+G I++ L+ GKP
Sbjct: 156 VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 215
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           PF+ S   + +  I    E   P    + ++P    L + +L+ +P  R T  E  N  F
Sbjct: 216 PFETSCLKETYLRI-KKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEF 270
Query: 146 L 146
Sbjct: 271 F 271

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+ +     ++KI DFG +             G+  Y+APE+++  KYD K D+WS 
Sbjct: 133 ENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK-KYDEKCDVWSC 191
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L+ G PPF G    ++ + +    +  F P    ++  +   L + +L   P +
Sbjct: 192 GVILYILLCGYPPFGGQTDQEILKRV-EKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSK 250
Query: 134 RITFKEFFNH 143
           RI+ +E  NH
Sbjct: 251 RISAEEALNH 260

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 75.1 bits (183), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 38/115 (33%), Positives = 65/115 (56%), Gaps = 10/115 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQ 274

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+ +      ++I DFG +             G+  Y+APE++    YD K D+WS 
Sbjct: 179 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWST 237
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L++G PPF+G+N+  + + +    +  F     +++     DL R +L   P  
Sbjct: 238 GVILYILLSGCPPFNGANEYDILKKV-EKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 296
Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSV-VP 162
           RI+ ++  +H ++    QT   EQ SV VP
Sbjct: 297 RISARDALDHEWI----QTYTKEQISVDVP 322

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+ +      ++I DFG +             G+  Y+APE++    YD K D+WS 
Sbjct: 178 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWST 236
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L++G PPF+G+N+  + + +    +  F     +++     DL R +L   P  
Sbjct: 237 GVILYILLSGCPPFNGANEYDILKKV-EKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 295
Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSV-VP 162
           RI+ ++  +H ++    QT   EQ SV VP
Sbjct: 296 RISARDALDHEWI----QTYTKEQISVDVP 321

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+ +      ++I DFG +             G+  Y+APE++    YD K D+WS 
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWST 213
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L++G PPF+G+N+  + + +    +  F     +++     DL R +L   P  
Sbjct: 214 GVILYILLSGCPPFNGANEYDILKKV-EKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 272
Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSV-VP 162
           RI+ ++  +H ++    QT   EQ SV VP
Sbjct: 273 RISARDALDHEWI----QTYTKEQISVDVP 298

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFG A+ +  +     LCG+P Y+APEII +  Y+   D W++G +++++  G PP
Sbjct: 180 IKVTDFGLAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F     +Q+++ I+ S ++RFP         D  DL R LL+ +  +R 
Sbjct: 238 FFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 5/121 (4%)
Query: 27  LKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG A  LT   +  +T  G+P +MAPE+IQ   YD+KAD+WS+G    +L  G+P
Sbjct: 159 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEP 218
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           P    + +++   I  +     PP  + +      +     L ++P  R T KE   H+F
Sbjct: 219 PNSDMHPMRVLFLIPKNN----PPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKF 274
Query: 146 L 146
           +
Sbjct: 275 I 275

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 2/133 (1%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N++  T + + V KI DFG A  L P ++      +  + APEI+         D+W++
Sbjct: 178 ENIMCETKKASSV-KIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAI 236
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G + + L++G  PF G + L+  QN+    +  F   A   + P+  D  + LL++ P +
Sbjct: 237 GVLGYVLLSGLSPFAGEDDLETLQNV-KRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRK 295
Query: 134 RITFKEFFNHRFL 146
           R+T  +   H +L
Sbjct: 296 RLTVHDALEHPWL 308

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P      L G+  Y+ PE+I+   +D K DLWS+G + ++ + GKPP
Sbjct: 152 LKIADFGWSVH-APSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 210
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           F+ +   + ++ I +  E  FP    E       DL   LL+ NP +R   +E   H ++
Sbjct: 211 FEANTYQETYKRI-SRVEFTFPDFVTE----GARDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 2/136 (1%)
Query: 2   CYVFMIVSAN-ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ 60
           C+   IV  N   +NLL+++      +K+ DFG A  +   +      G+P Y++PE+++
Sbjct: 144 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLK 203
Query: 61  NHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCV 120
              Y    D+W+ G IL+ L+ G PPF   +Q +L+  I  +    +P    + + P+  
Sbjct: 204 KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI-KAGAYDYPSPEWDTVTPEAK 262
Query: 121 DLCRCLLRQNPVERIT 136
            L   +L  NP +RIT
Sbjct: 263 SLIDSMLTVNPKKRIT 278

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P Y+AP II +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEYLAPAIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 27  LKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   +TP Q    T+ G+P +MAPE++    Y  K D+WS+G +  +++ G+P
Sbjct: 156 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
Query: 86  PFDGSNQLQLFQNILT--STELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           P+   N L+    I T  + EL+ P    E+L     D     L  +  +R + KE   H
Sbjct: 216 PYLNENPLRALYLIATNGTPELQNP----EKLSAIFRDFLNRCLEMDVEKRGSAKELIQH 271
Query: 144 RFL 146
           +FL
Sbjct: 272 QFL 274

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+ +      ++I DFG +             G+  Y+APE++    YD K D+WS 
Sbjct: 155 ENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHG-TYDEKCDVWST 213
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L++G PPF+G+N+  + + +    +  F     +++     DL R  L   P  
Sbjct: 214 GVILYILLSGCPPFNGANEYDILKKV-EKGKYTFELPQWKKVSESAKDLIRKXLTYVPSX 272
Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSV-VP 162
           RI+ ++  +H ++    QT   EQ SV VP
Sbjct: 273 RISARDALDHEWI----QTYTKEQISVDVP 298

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG  + S+    +  T CG+  YMAPEI+    ++   D WS+GA+++ ++TG P
Sbjct: 160 VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           PF G N+ +    IL   +L  PP   +E      DL + LL++N   R+
Sbjct: 220 PFTGENRKKTIDKIL-KCKLNLPPYLTQEAR----DLLKKLLKRNAASRL 264

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+L+ + E    +KI DFG +             G+  Y+APE+++   YD K D+WS 
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSA 208
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L++G PPF G N+  + + + T  +  F       +  D  DL R +L  +P  
Sbjct: 209 GVILYILLSGTPPFYGKNEYDILKRVETG-KYAFDLPQWRTISDDAKDLIRKMLTFHPSL 267
Query: 134 RITFKEFFNH 143
           RIT  +   H
Sbjct: 268 RITATQCLEH 277

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
Query: 27  LKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KIGDFG A  +    +    LCG+P Y+APE++    +  + D+WS+G I++ L+ GKP
Sbjct: 178 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 237
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           PF+ S   + +  I    E   P    + ++P    L + +L+ +P  R T  E  N  F
Sbjct: 238 PFETSCLKETYLRI-KKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEF 292
Query: 146 L 146
Sbjct: 293 F 293

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+L+ + E    +KI DFG +             G+  Y+APE+++   YD K D+WS 
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSA 208
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L++G PPF G N+  + + + T  +  F       +  D  DL R +L  +P  
Sbjct: 209 GVILYILLSGTPPFYGKNEYDILKRVETG-KYAFDLPQWRTISDDAKDLIRKMLTFHPSL 267
Query: 134 RITFKEFFNH 143
           RIT  +   H
Sbjct: 268 RITATQCLEH 277

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
Query: 27  LKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KIGDFG A  +    +    LCG+P Y+APE++    +  + D+WS+G I++ L+ GKP
Sbjct: 180 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 239
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           PF+ S   + +  I    E   P    + ++P    L + +L+ +P  R T  E  N  F
Sbjct: 240 PFETSCLKETYLRI-KKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEF 294
Query: 146 L 146
Sbjct: 295 F 295

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+++      +K+ DFG A  +   +      G+P Y++PE+++   Y    D+W+ 
Sbjct: 134 ENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 193
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L+ G PPF   +Q +L+  I  +    +P    + + P+   L   +L  NP +
Sbjct: 194 GVILYILLVGYPPFWDEDQHRLYAQI-KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK 252
Query: 134 RIT 136
           RIT
Sbjct: 253 RIT 255

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 2/130 (1%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+L+ + E    +KI DFG +             G+  Y+APE+++   YD K D+WS 
Sbjct: 150 ENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSA 208
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L++G PPF G N+  + + + T  +  F       +  D  DL R +L  +P  
Sbjct: 209 GVILYILLSGTPPFYGKNEYDILKRVETG-KYAFDLPQWRTISDDAKDLIRKMLTFHPSL 267
Query: 134 RITFKEFFNH 143
           RIT  +   H
Sbjct: 268 RITATQCLEH 277

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 10/139 (7%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ------NHKYDAK 67
           +N+L+  N     +++ DFGF+  L P +    LCG+P Y+APEI++      +  Y  +
Sbjct: 229 ENILLDDNMQ---IRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKE 285
Query: 68  ADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
            DLW+ G ILF L+ G PPF    Q+ + + I+   + +F     ++      DL   LL
Sbjct: 286 VDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEG-QYQFSSPEWDDRSSTVKDLISRLL 344
Query: 128 RQNPVERITFKEFFNHRFL 146
           + +P  R+T ++   H F 
Sbjct: 345 QVDPEARLTAEQALQHPFF 363

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 73.6 bits (179), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
Query: 27  LKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KIGDFG A  +    +    LCG+P Y+APE++    +  + D+WS+G I++ L+ GKP
Sbjct: 154 VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKP 213
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           PF+ S   + +  I    E   P    + ++P    L + +L+ +P  R T  E  N  F
Sbjct: 214 PFETSCLKETYLRI-KKNEYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEF 268
Query: 146 L 146
Sbjct: 269 F 269

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 75/136 (55%), Gaps = 8/136 (5%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           QN+ ++ +     +++GDFG AR L +  +LA    G+P Y++PEI +N  Y+ K+D+W+
Sbjct: 154 QNIFLTKD---GTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWA 210
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           +G +L++L T K  F+  +   L   I++ +   FPP ++   + D   L   L ++NP 
Sbjct: 211 LGCVLYELCTLKHAFEAGSMKNLVLKIISGS---FPPVSLHYSY-DLRSLVSQLFKRNPR 266
Query: 133 ERITFKEFFNHRFLGE 148
           +R +        F+ +
Sbjct: 267 DRPSVNSILEKGFIAK 282

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +++ DFG A+ +  +     LCG+P Y+APEII +  Y+   D W++G +++++  G PP
Sbjct: 180 IQVTDFGLAKRVKGRTW--XLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F     +Q+++ I+ S ++RFP         D  DL R LL+ +  +R 
Sbjct: 238 FFADQPIQIYEKIV-SGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+++      +K+ DFG A  +   +      G+P Y++PE+++   Y    D+W+ 
Sbjct: 133 ENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 192
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L+ G PPF   +Q +L+  I  +    +P    + + P+   L   +L  NP +
Sbjct: 193 GVILYILLVGYPPFWDEDQHRLYAQI-KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK 251
Query: 134 RIT 136
           RIT
Sbjct: 252 RIT 254

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 77/158 (48%), Gaps = 22/158 (13%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ D+G  +  L P D   T CG+P Y+APEI++   Y    D W++G ++F+++ G+ 
Sbjct: 192 IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 251
Query: 86  PFD--GSN-------QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI- 135
           PFD  GS+       +  LFQ IL   ++R P      L      + +  L ++P ER+ 
Sbjct: 252 PFDIVGSSDNPDQNTEDYLFQVIL-EKQIRIP----RSLSVKAASVLKSFLNKDPKERLG 306
Query: 136 -----TFKEFFNHRFLGELRQTVHAEQHSVVPETKPMV 168
                 F +   H F   +   +  EQ  VVP  KP +
Sbjct: 307 CHPQTGFADIQGHPFFRNVDWDM-MEQKQVVPPFKPNI 343

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Query: 27  LKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   +TP Q    T+ G+P +MAPE++    Y  K D+WS+G +  +++ G+P
Sbjct: 155 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
Query: 86  PFDGSNQLQLFQNILT--STELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           P+   N L+    I T  + EL+ P    E+L     D     L  +  +R + KE   H
Sbjct: 215 PYLNENPLRALYLIATNGTPELQNP----EKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270
Query: 144 RFL 146
           +FL
Sbjct: 271 QFL 273

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+++      +K+ DFG A  +   +      G+P Y++PE+++   Y    D+W+ 
Sbjct: 134 ENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWAC 193
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L+ G PPF   +Q +L+  I  +    +P    + + P+   L   +L  NP +
Sbjct: 194 GVILYILLVGYPPFWDEDQHRLYAQI-KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKK 252
Query: 134 RIT 136
           RIT
Sbjct: 253 RIT 255

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A++  G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 171 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 231 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 281

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ-----NH-KYDAKADLWSVGAILFQL 80
           +K+ DFGF+  L P +   ++CG+P Y+APEII+     NH  Y  + D+WS G I++ L
Sbjct: 163 IKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 222
Query: 81  VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF 140
           + G PPF    Q+ + + I+ S   +F     ++      DL    L   P +R T +E 
Sbjct: 223 LAGSPPFWHRKQMLMLRMIM-SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 281
Query: 141 FNHRFL 146
             H F 
Sbjct: 282 LAHPFF 287

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 73.2 bits (178), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     L G+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLAGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 72.8 bits (177), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     LCG+P  +APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLCGTPEALAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+ +      ++I DFG +             G+  Y+APE++    YD K D+WS 
Sbjct: 161 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWST 219
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L++G PPF+G+N+  + + +    +  F     +++     DL R +L   P  
Sbjct: 220 GVILYILLSGCPPFNGANEYDILKKV-EKGKYTFELPQWKKVSESAKDLIRKMLTYVPSM 278
Query: 134 RITFKEFFNHRFLGELRQTVHAEQ 157
           RI+ ++  +H ++    QT   EQ
Sbjct: 279 RISARDALDHEWI----QTYTKEQ 298

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 67/122 (54%), Gaps = 10/122 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+ +  +     L G+P Y+APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKRVKGRTW--XLXGTPEYLAPEIILSKGYNKAVDWWAL 224
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I+ S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKIV-SGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279
Query: 134 RI 135
           R 
Sbjct: 280 RF 281

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 72.4 bits (176), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ-----NH-KYDAKADLWSVGAILFQL 80
           +K+ DFGF+  L P +    +CG+P Y+APEII+     NH  Y  + D+WS G I++ L
Sbjct: 163 IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 222
Query: 81  VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF 140
           + G PPF    Q+ + + I+ S   +F     ++      DL    L   P +R T +E 
Sbjct: 223 LAGSPPFWHRKQMLMLRMIM-SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 281
Query: 141 FNHRFL 146
             H F 
Sbjct: 282 LAHPFF 287

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A++  G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 172 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 232 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 282

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 72.0 bits (175), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A++  G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 168 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 228 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 278

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 7/126 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ-----NH-KYDAKADLWSVGAILFQL 80
           +K+ DFGF+  L P +    +CG+P Y+APEII+     NH  Y  + D+WS G I++ L
Sbjct: 150 IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTL 209
Query: 81  VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF 140
           + G PPF    Q+ + + I+ S   +F     ++      DL    L   P +R T +E 
Sbjct: 210 LAGSPPFWHRKQMLMLRMIM-SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 268
Query: 141 FNHRFL 146
             H F 
Sbjct: 269 LAHPFF 274

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG ++ S+  +  A + CG+  YMAPE++    +   AD WS G ++F+++TG  
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           PF G ++ +    IL +       G  + L P+   L R L ++NP  R+
Sbjct: 225 PFQGKDRKETMTMILKAK-----LGMPQFLSPEAQSLLRMLFKRNPANRL 269

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 72.0 bits (175), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG ++ S+  +  A + CG+  YMAPE++    +   AD WS G ++F+++TG  
Sbjct: 166 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 225
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           PF G ++ +    IL +       G  + L P+   L R L ++NP  R+
Sbjct: 226 PFQGKDRKETMTMILKAK-----LGMPQFLSPEAQSLLRMLFKRNPANRL 270

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 169 IQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 229 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 279

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG ++ S+  +  A + CG+  YMAPE++    +   AD WS G ++F+++TG  
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           PF G ++ +    IL +       G  + L P+   L R L ++NP  R+
Sbjct: 225 PFQGKDRKETMTMILKAK-----LGMPQFLSPEAQSLLRMLFKRNPANRL 269

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Query: 27  LKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   +TP Q     + G+P +MAPE++    Y  K D+WS+G +  +++ G+P
Sbjct: 155 VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
Query: 86  PFDGSNQLQLFQNILT--STELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           P+   N L+    I T  + EL+ P    E+L     D     L  +  +R + KE   H
Sbjct: 215 PYLNENPLRALYLIATNGTPELQNP----EKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270
Query: 144 RFL 146
           +FL
Sbjct: 271 QFL 273

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG  + S+    +    CG+  YMAPEI+    ++   D WS+GA+++ ++TG P
Sbjct: 160 VKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           PF G N+ +    IL   +L  PP   +E      DL + LL++N   R+
Sbjct: 220 PFTGENRKKTIDKIL-KCKLNLPPYLTQEAR----DLLKKLLKRNAASRL 264

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Query: 27  LKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   +TP Q     + G+P +MAPE++    Y  K D+WS+G +  +++ G+P
Sbjct: 156 VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
Query: 86  PFDGSNQLQLFQNILT--STELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           P+   N L+    I T  + EL+ P    E+L     D     L  +  +R + KE   H
Sbjct: 216 PYLNENPLRALYLIATNGTPELQNP----EKLSAIFRDFLNRCLEMDVEKRGSAKELIQH 271
Query: 144 RFL 146
           +FL
Sbjct: 272 QFL 274

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P      +CG+  Y+ PE+I+   +D K DLW  G + ++ + G PP
Sbjct: 153 LKIADFGWSVH-APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           FD  +  +  + I+ + +L+FPP     L     DL   LLR +P +R+  K    H
Sbjct: 212 FDSPSHTETHRRIV-NVDLKFPPF----LSDGSKDLISKLLRYHPPQRLPLKGVMEH 263

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 169 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 229 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 279

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 6/117 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG++    P      +CG+  Y+ PE+I+   +D K DLW  G + ++ + G PP
Sbjct: 154 LKIADFGWSVH-APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           FD  +  +  + I+ + +L+FPP     L     DL   LLR +P +R+  K    H
Sbjct: 213 FDSPSHTETHRRIV-NVDLKFPPF----LSDGSKDLISKLLRYHPPQRLPLKGVMEH 264

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 231 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 281

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 71.6 bits (174), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 231 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 281

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 169 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 229 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 279

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 231 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 281

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 172 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 232 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 282

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 169 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 229 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 279

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 168 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 228 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 278

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 153 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 213 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 263

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 10/149 (6%)
Query: 2   CYVFMIVSAN-ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ 60
           C+  M+V  +   +N+L+  +      KI DFG +  ++  +     CGSP Y APE+I 
Sbjct: 132 CHRHMVVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRXSCGSPNYAAPEVIS 188
Query: 61  NHKYDA-KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC 119
              Y   + D+WS G IL+ L+ G  PFD  +   LF+ I     + + P   + L+P  
Sbjct: 189 GRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG--IFYTP---QYLNPSV 243
Query: 120 VDLCRCLLRQNPVERITFKEFFNHRFLGE 148
           + L + +L+ +P++R T K+   H +  +
Sbjct: 244 ISLLKHMLQVDPMKRATIKDIREHEWFKQ 272

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL  T E    + I DFG ++ +    +  T CG+P Y+APE++    Y    D WS+
Sbjct: 135 ENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSI 193
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G I + L+ G PPF    + +LF+ I       F     +++     D    LL ++P E
Sbjct: 194 GVITYILLCGYPPFYEETESKLFEKI-KEGYYEFESPFWDDISESAKDFICHLLEKDPNE 252
Query: 134 RITFKEFFNHRFL 146
           R T ++  +H ++
Sbjct: 253 RYTCEKALSHPWI 265

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 176 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 236 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 286

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 27  LKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
           +K+ DFGF   ++ +D+     L G+P +MAPE+I    Y  + D+WS+G ++ ++V G+
Sbjct: 180 VKLSDFGFCAQIS-KDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238
Query: 85  PPFDGSNQLQLFQNILTSTELRFPPGAIEELH---PDCVDLCRCLLRQNPVERITFKEFF 141
           PP+   + +Q  + +  S     PP  ++  H   P   D    +L ++P ER T +E  
Sbjct: 239 PPYFSDSPVQAMKRLRDS-----PPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELL 293
Query: 142 NHRFL 146
           +H FL
Sbjct: 294 DHPFL 298

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  + ++         CG+P Y+APEII    Y    D W+ G +L++++ G+ 
Sbjct: 160 IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 219
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           PF+G ++ +LFQ+I+    + +P    + +  + V +C+ L+ ++P +R+
Sbjct: 220 PFEGEDEDELFQSIMEHN-VAYP----KSMSKEAVAICKGLMTKHPGKRL 264

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 64/110 (58%), Gaps = 6/110 (5%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  + ++         CG+P Y+APEII    Y    D W+ G +L++++ G+ 
Sbjct: 481 IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 540
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           PF+G ++ +LFQ+I+    + +P    + +  + V +C+ L+ ++P +R+
Sbjct: 541 PFEGEDEDELFQSIMEHN-VAYP----KSMSKEAVAICKGLMTKHPGKRL 585

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 146 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 206 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 256

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 147 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 207 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 257

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Query: 27  LKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   +TP Q     + G+P +MAPE++    Y  K D+WS+G +  +++ G+P
Sbjct: 155 VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
Query: 86  PFDGSNQLQLFQNILT--STELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           P+   N L+    I T  + EL+ P    E+L     D     L  +  +R + KE   H
Sbjct: 215 PYLNENPLRALYLIATNGTPELQNP----EKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270
Query: 144 RFL 146
           +FL
Sbjct: 271 QFL 273

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 148 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 208 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 258

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 2/125 (1%)
Query: 24  TPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWSVGAILFQLVT 82
            P LKI DFG++++        +  G+P Y+APE++   +YD K AD+WS G  L+ ++ 
Sbjct: 153 APRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 83  GKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF 141
           G  PF+   + + F+  +     +++       + P+C  L   +   +P +RI+  E  
Sbjct: 213 GAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIR 272
Query: 142 NHRFL 146
           NH + 
Sbjct: 273 NHEWF 277

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 62/115 (53%), Gaps = 6/115 (5%)
Query: 29  IGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFD 88
           I DFG++    P     T+CG+  Y+ PE+I+   ++ K DLW +G + ++L+ G PPF+
Sbjct: 164 IADFGWSVH-APSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
Query: 89  GSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
            ++  + ++ I+   +L+FP      +     DL   LLR NP ER+   +   H
Sbjct: 223 SASHNETYRRIV-KVDLKFPAS----VPTGAQDLISKLLRHNPSERLPLAQVSAH 272

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 25  PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWSVGAILFQLVTG 83
           P LKI DFG+++S        +  G+P Y+APE++   +YD K AD+WS G  L+ ++ G
Sbjct: 154 PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Query: 84  KPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
             PF+   + + F+  +     +++       + P+C  L   +   +P +RI+  E  N
Sbjct: 214 AYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRN 273
Query: 143 HRFL 146
           H + 
Sbjct: 274 HEWF 277

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 2/124 (1%)
Query: 25  PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWSVGAILFQLVTG 83
           P LKI DFG+++S        +  G+P Y+APE++   +YD K AD+WS G  L+ ++ G
Sbjct: 153 PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 212
Query: 84  KPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
             PF+   + + F+  +     +++       + P+C  L   +   +P +RI+  E  N
Sbjct: 213 AYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRN 272
Query: 143 HRFL 146
           H + 
Sbjct: 273 HEWF 276

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 149 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 209 LPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 259

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 70.9 bits (172), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N++  T   +  +KI +FG AR L P D    L  +P Y APE+ Q+       D+WS+
Sbjct: 131 ENIIYQTRR-SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSL 189
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++ L++G  PF      Q+ +NI+ + E  F   A +E+  + +D    LL +    
Sbjct: 190 GTLVYVLLSGINPFLAETNQQIIENIMNA-EYTFDEEAFKEISIEAMDFVDRLLVKERKS 248
Query: 134 RITFKEFFNHRFLGE 148
           R+T  E   H +L +
Sbjct: 249 RMTASEALQHPWLKQ 263

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ D+G  +  L P D     CG+P Y+APEI++   Y    D W++G ++F+++ G+ 
Sbjct: 145 IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 204
Query: 86  PFD--GSN-------QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI- 135
           PFD  GS+       +  LFQ IL   ++R P      L      + +  L ++P ER+ 
Sbjct: 205 PFDIVGSSDNPDQNTEDYLFQVIL-EKQIRIP----RSLSVKAASVLKSFLNKDPKERLG 259
Query: 136 -----TFKEFFNHRFLGELRQTVHAEQHSVVPETKPMV 168
                 F +   H F   +   +  EQ  VVP  KP +
Sbjct: 260 CHPQTGFADIQGHPFFRNVDWDM-MEQKQVVPPFKPNI 296

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 6/121 (4%)
Query: 27  LKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KIGDFG A  +    +   TLCG+P Y+APE++    +  + D+WS+G IL+ L+ GKP
Sbjct: 181 VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           PF+ S   + +  I    E   P      ++P    L R +L  +P  R +  E     F
Sbjct: 241 PFETSCLKETYIRI-KKNEYSVP----RHINPVASALIRRMLHADPTLRPSVAELLTDEF 295
Query: 146 L 146
Sbjct: 296 F 296

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ D+G  +  L P D     CG+P Y+APEI++   Y    D W++G ++F+++ G+ 
Sbjct: 149 IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 208
Query: 86  PFD--GSN-------QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI- 135
           PFD  GS+       +  LFQ IL   ++R P      L      + +  L ++P ER+ 
Sbjct: 209 PFDIVGSSDNPDQNTEDYLFQVIL-EKQIRIP----RSLSVKAASVLKSFLNKDPKERLG 263
Query: 136 -----TFKEFFNHRFLGELRQTVHAEQHSVVPETKPMV 168
                 F +   H F   +   +  EQ  VVP  KP +
Sbjct: 264 CHPQTGFADIQGHPFFRNVDWDM-MEQKQVVPPFKPNI 300

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 28  KIGDFGFARSLTPQDLAD-TLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           K+ DFG  +      +   T CG+P Y+APEI+Q   Y    D W++G +L++++ G  P
Sbjct: 164 KLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP 223
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F+  N+  LF+ IL   E+ +P      LH D   + +  + +NP  R+
Sbjct: 224 FEAENEDDLFEAILND-EVVYPTW----LHEDATGILKSFMTKNPTMRL 267

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 22/158 (13%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ D+G  +  L P D     CG+P Y+APEI++   Y    D W++G ++F+++ G+ 
Sbjct: 160 IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 219
Query: 86  PFD--GSN-------QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI- 135
           PFD  GS+       +  LFQ IL   ++R P      +      + +  L ++P ER+ 
Sbjct: 220 PFDIVGSSDNPDQNTEDYLFQVIL-EKQIRIP----RSMSVKAASVLKSFLNKDPKERLG 274
Query: 136 -----TFKEFFNHRFLGELRQTVHAEQHSVVPETKPMV 168
                 F +   H F   +   +  EQ  VVP  KP +
Sbjct: 275 CLPQTGFADIQGHPFFRNVDWDM-MEQKQVVPPFKPNI 311

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 69.7 bits (169), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N L  T+     LK+ DFG A    P  +  T  G+P Y++P++++   Y  + D WS 
Sbjct: 152 ENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSA 210
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++ L+ G PPF      ++   I   T   FP      + P    L R LL ++P +
Sbjct: 211 GVMMYVLLCGYPPFSAPTDXEVMLKIREGT-FTFPEKDWLNVSPQAESLIRRLLTKSPKQ 269
Query: 134 RITFKEFFNHRFL 146
           RIT  +   H + 
Sbjct: 270 RITSLQALEHEWF 282

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 69.7 bits (169), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 27  LKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG A  LT   +  +T  G+P +MAPE+I+   YD+KAD+WS+G    +L  G+P
Sbjct: 163 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP 222
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           P    + +++   I  +     PP           +     L + P  R T KE   H+F
Sbjct: 223 PHSELHPMKVLFLIPKNN----PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 278
Query: 146 L 146
           +
Sbjct: 279 I 279

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 24/136 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++     +LK+ DFGFA+  T                       KYD   D+WS+
Sbjct: 146 ENLLYTSKRPNAILKLTDFGFAKETT---------------------GEKYDKSCDMWSL 184
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTEL---RFPPGAIEELHPDCVDLCRCLLRQN 130
           G I++ L+ G PPF  ++ L +   + T   +    FP     E+  +   L R LL+  
Sbjct: 185 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 244
Query: 131 PVERITFKEFFNHRFL 146
           P +R+T  EF NH ++
Sbjct: 245 PTQRMTITEFMNHPWI 260

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N L  T+     LK+ DFG A    P  +  T  G+P Y++P++++   Y  + D WS 
Sbjct: 135 ENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSA 193
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++ L+ G PPF      ++   I   T   FP      + P    L R LL ++P +
Sbjct: 194 GVMMYVLLCGYPPFSAPTDXEVMLKIREGT-FTFPEKDWLNVSPQAESLIRRLLTKSPKQ 252
Query: 134 RITFKEFFNHRFL 146
           RIT  +   H + 
Sbjct: 253 RITSLQALEHEWF 265

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 27  LKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG A  LT   +  +T  G+P +MAPE+I+   YD+KAD+WS+G    +L  G+P
Sbjct: 143 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP 202
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           P    + +++   I  +     PP           +     L + P  R T KE   H+F
Sbjct: 203 PHSELHPMKVLFLIPKNN----PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 258
Query: 146 L 146
           +
Sbjct: 259 I 259

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 27  LKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+GDFG AR L   +D A    G+P YM+PE +    Y+ K+D+WS+G +L++L    P
Sbjct: 155 VKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELH 116
           PF   +Q +L   I      R P    +EL+
Sbjct: 215 PFTAFSQKELAGKIREGKFRRIPYRYSDELN 245

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 69.3 bits (168), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDA-KADLWS 72
           +NLL+  N     +KI DFG +  +T  +   T CGSP Y APE+I    Y   + D+WS
Sbjct: 137 ENLLLDDN---LNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWS 193
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
            G +L+ ++ G+ PFD      LF+ +  S     P    + L P    L R ++  +P+
Sbjct: 194 CGIVLYVMLVGRLPFDDEFIPNLFKKV-NSCVYVMP----DFLSPGAQSLIRRMIVADPM 248
Query: 133 ERITFKEF 140
           +RIT +E 
Sbjct: 249 QRITIQEI 256

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +K+ DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 140 MLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 199
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   NI ++    F             D  R LL ++P  R+
Sbjct: 200 ITYILLSGASPFLGETKQETLTNI-SAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 258
Query: 136 TFKEFFNHRFLGELRQ 151
           T  +   H ++  +R+
Sbjct: 259 TIAQSLEHSWIKAIRR 274

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 69.3 bits (168), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +F  I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 231 LPPFRAGNEGLIFAKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 281

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 68.9 bits (167), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 61/116 (52%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 174 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +FQ I+   E  FP        P   DL   LL  +  +R+  +E
Sbjct: 234 LPPFRAGNEYLIFQKII-KLEYDFPAA----FFPKARDLVEKLLVLDATKRLGCEE 284

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 26  VLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII---QNHKYDAKADLWSVGAILFQLVT 82
           ++K+GDFG A  + P   A+   G+P +MAPE+I      +YD K D+WS+G    +L  
Sbjct: 192 LVKLGDFGSASIMAP---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 248
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
            KPP    N +    +I  +       G   E   + VD C   L++ P +R T +    
Sbjct: 249 RKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC---LQKIPQDRPTSEVLLK 305
Query: 143 HRFLGELRQTVHAEQHSVVPETKPMVELLNS 173
           HRF+  LR+        ++  TK  V  L++
Sbjct: 306 HRFV--LRERPPTVIMDLIQRTKDAVRELDN 334

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 27  LKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KIGDFG A  +    +    LCG+P Y+APE++    +  + D+WS+G IL+ L+ GKP
Sbjct: 181 VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           PF+ S   + +  I    E   P      ++P    L R +L  +P  R +  E     F
Sbjct: 241 PFETSCLKETYIRI-KKNEYSVP----RHINPVASALIRRMLHADPTLRPSVAELLTDEF 295
Query: 146 L 146
Sbjct: 296 F 296

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 26  VLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII---QNHKYDAKADLWSVGAILFQLVT 82
           ++K+GDFG A  + P   A+   G+P +MAPE+I      +YD K D+WS+G    +L  
Sbjct: 153 LVKLGDFGSASIMAP---ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE 209
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
            KPP    N +    +I  +       G   E   + VD C   L++ P +R T +    
Sbjct: 210 RKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC---LQKIPQDRPTSEVLLK 266
Query: 143 HRFLGELRQTVHAEQHSVVPETKPMVELLNS 173
           HRF+  LR+        ++  TK  V  L++
Sbjct: 267 HRFV--LRERPPTVIMDLIQRTKDAVRELDN 295

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 27  LKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+ L+P   Q  A+   G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 171 IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
            PPF   N+  +F  I+   E  FP    E+  P   DL   LL  +  +R+  +E
Sbjct: 231 LPPFRAGNEGLIFAKII-KLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEE 281

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 68.2 bits (165), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 27  LKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KIGDFG A  +    +    LCG+P Y+APE++    +  + D+WS+G IL+ L+ GKP
Sbjct: 181 VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           PF+ S   + +  I    E   P      ++P    L R +L  +P  R +  E     F
Sbjct: 241 PFETSCLKETYIRI-KKNEYSVP----RHINPVASALIRRMLHADPTLRPSVAELLTDEF 295
Query: 146 L 146
Sbjct: 296 F 296

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDA-KADLWSVGAILFQLVTGKP 85
           +KI DFG +  +T  +   T CGSP Y APE+I    Y   + D+WS G IL+ ++  + 
Sbjct: 151 VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 210
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF 141
           PFD  +   LF+NI ++     P    + L P    L + +L  NP+ RI+  E  
Sbjct: 211 PFDDESIPVLFKNI-SNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIM 261

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 27  LKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+GDFG AR L      A T  G+P YM+PE +    Y+ K+D+WS+G +L++L    P
Sbjct: 155 VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELH 116
           PF   +Q +L   I      R P    +EL+
Sbjct: 215 PFTAFSQKELAGKIREGKFRRIPYRYSDELN 245

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 15/153 (9%)
Query: 6   MIVSANACQNLLVSTNEVTP--VL-------KIGDFGFARSLTPQDLADTLCGSPLYMAP 56
           ++ + + C   +V   ++ P  VL       KI DFG +  ++  +   T CGSP Y AP
Sbjct: 120 ILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAP 179
Query: 57  EIIQNHKYDA-KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEEL 115
           E+I    Y   + D+WS G IL+ L+ G  PFD  +   LF+ I        P    E L
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV-FYIP----EYL 234
Query: 116 HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE 148
           +     L   +L+ +P++R T K+   H +  +
Sbjct: 235 NRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGV 205
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+ ++    F             D  R LL ++P +R+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 136 TFKEFFNH 143
           T ++   H
Sbjct: 265 TIQDSLQH 272

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDA-KADLWSVGAILFQLVTGKP 85
           +KI DFG +  +T  +   T CGSP Y APE+I    Y   + D+WS G IL+ ++  + 
Sbjct: 152 VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 211
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF 141
           PFD  +   LF+NI ++     P    + L P    L + +L  NP+ RI+  E  
Sbjct: 212 PFDDESIPVLFKNI-SNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIM 262

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 27  LKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG A  LT   +  +   G+P +MAPE+I+   YD+KAD+WS+G    +L  G+P
Sbjct: 158 VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP 217
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           P    + +++   I  +     PP           +     L + P  R T KE   H+F
Sbjct: 218 PHSELHPMKVLFLIPKNN----PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 273
Query: 146 L 146
           +
Sbjct: 274 I 274

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 2/124 (1%)
Query: 25  PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWSVGAILFQLVTG 83
           P LKI  FG+++S        +  G+P Y+APE++   +YD K AD+WS G  L+ ++ G
Sbjct: 154 PRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Query: 84  KPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
             PF+   + + F+  +     +++       + P+C  L   +   +P +RI+  E  N
Sbjct: 214 AYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRN 273
Query: 143 HRFL 146
           H + 
Sbjct: 274 HEWF 277

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+ ++    F             D  R LL ++P +R+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 136 TFKEFFNHRFL 146
           T ++   H ++
Sbjct: 265 TIQDSLQHPWI 275

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 14/126 (11%)
Query: 27  LKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +     D   +  CG+P Y+APEI+   KY+   D WS G +L++++ G+ 
Sbjct: 157 IKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 216
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           PF G ++ +LF +I       F P  +E+   +  DL   L  + P +R+  +       
Sbjct: 217 PFHGQDEEELFHSIRMDNP--FYPRWLEK---EAKDLLVKLFVREPEKRLGVR------- 264
Query: 146 LGELRQ 151
            G++RQ
Sbjct: 265 -GDIRQ 269

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDA-KADLWSVGAILFQLVTGKP 85
           +KI DFG +  +T  +   T CGSP Y APE+I    Y   + D+WS G IL+ ++  + 
Sbjct: 142 VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 201
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF 141
           PFD  +   LF+NI ++     P    + L P    L + +L  NP+ RI+  E  
Sbjct: 202 PFDDESIPVLFKNI-SNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIM 252

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/116 (34%), Positives = 60/116 (51%), Gaps = 6/116 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDA-KADLWSVGAILFQLVTGKP 85
           +KI DFG +  +T  +   T CGSP Y APE+I    Y   + D+WS G IL+ ++  + 
Sbjct: 146 VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 205
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF 141
           PFD  +   LF+NI ++     P    + L P    L + +L  NP+ RI+  E  
Sbjct: 206 PFDDESIPVLFKNI-SNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIM 256

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 27  LKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG A  LT   +  +   G+P +MAPE+I+   YD+KAD+WS+G    +L  G+P
Sbjct: 143 VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP 202
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           P    + +++   I  +     PP           +     L + P  R T KE   H+F
Sbjct: 203 PHSELHPMKVLFLIPKNN----PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKF 258
Query: 146 L 146
           +
Sbjct: 259 I 259

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+ ++    F             D  R LL ++P +R+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 136 TFKEFFNHRFL 146
           T ++   H ++
Sbjct: 265 TIQDSLQHPWI 275

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 27  LKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KIGDFG A  +    +    LCG+P Y+APE++    +  + D+WS+G IL+ L+ GKP
Sbjct: 165 VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 224
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           PF+ S   + +  I    E   P      ++P    L R +L  +P  R +  E     F
Sbjct: 225 PFETSCLKETYIRI-KKNEYSVP----RHINPVASALIRRMLHADPTLRPSVAELLTDEF 279
Query: 146 L 146
Sbjct: 280 F 280

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 14/126 (11%)
Query: 27  LKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +     D   +  CG+P Y+APEI+   KY+   D WS G +L++++ G+ 
Sbjct: 158 IKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 217
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           PF G ++ +LF +I       F P  +E+   +  DL   L  + P +R+  +       
Sbjct: 218 PFHGQDEEELFHSIRMDNP--FYPRWLEK---EAKDLLVKLFVREPEKRLGVR------- 265
Query: 146 LGELRQ 151
            G++RQ
Sbjct: 266 -GDIRQ 270

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+ ++    F             D  R LL ++P +R+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 136 TFKEFFNH 143
           T ++   H
Sbjct: 265 TIQDSLQH 272

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+ ++    F             D  R LL ++P +R+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 136 TFKEFFNHRFL 146
           T ++   H ++
Sbjct: 265 TIQDSLQHPWI 275

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+ ++    F             D  R LL ++P +R+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 136 TFKEFFNHRFL 146
           T ++   H ++
Sbjct: 265 TIQDSLQHPWI 275

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+ ++    F             D  R LL ++P +R+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 136 TFKEFFNHRFL 146
           T ++   H ++
Sbjct: 265 TIQDSLQHPWI 275

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+ ++    F             D  R LL ++P +R+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 136 TFKEFFNH 143
           T ++   H
Sbjct: 265 TIQDSLQH 272

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 8/127 (6%)
Query: 25  PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWSVGAILFQLVTG 83
           P LKI DFG+++S        +  G+P Y+APE++   +YD K AD+WS G  L+ ++ G
Sbjct: 155 PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214
Query: 84  KPPFDGSNQ----LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
             PF+   +     +  Q IL S +   P      + P+C  L   +   +P  RI+  E
Sbjct: 215 AYPFEDPEEPRDYRKTIQRIL-SVKYSIPDDI--RISPECCHLISRIFVADPATRISIPE 271
Query: 140 FFNHRFL 146
              H + 
Sbjct: 272 IKTHSWF 278

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+ ++    F             D  R LL ++P +R+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 136 TFKEFFNH 143
           T ++   H
Sbjct: 265 TIQDSLQH 272

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 145 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 204
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+ ++    F             D  R LL ++P +R+
Sbjct: 205 ITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 263
Query: 136 TFKEFFNHRFL 146
           T ++   H ++
Sbjct: 264 TIQDSLQHPWI 274

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 145 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 204
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+ ++    F             D  R LL ++P +R+
Sbjct: 205 ITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 263
Query: 136 TFKEFFNHRFL 146
           T ++   H ++
Sbjct: 264 TIQDSLQHPWI 274

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 6/110 (5%)
Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG ++ ++  +  A + CG+  YMAPE++    +   AD WS G ++F+++TG  
Sbjct: 169 IKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSL 228
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           PF G ++ +    IL +       G  + L  +   L R L ++NP  R+
Sbjct: 229 PFQGKDRKETMTLILKAK-----LGMPQFLSTEAQSLLRALFKRNPANRL 273

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 1/136 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +K+ DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 161 MLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 220
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   NI ++    F             D  R LL ++P  R+
Sbjct: 221 ITYILLSGASPFLGETKQETLTNI-SAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 279
Query: 136 TFKEFFNHRFLGELRQ 151
              +   H ++  +R+
Sbjct: 280 XIAQSLEHSWIKAIRR 295

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+ ++    F             D  R LL ++P +R+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 136 TFKEFFNH 143
           T ++   H
Sbjct: 265 TIQDSLQH 272

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+ ++    F             D  R LL ++P +R+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 136 TFKEFFNH 143
           T ++   H
Sbjct: 265 TIQDSLQH 272

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+ ++    F             D  R LL ++P +R+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANV-SAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264
Query: 136 TFKEFFNH 143
           T ++   H
Sbjct: 265 TIQDSLQH 272

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 27/168 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWS 72
           QNLLV++ + T  LK+ DFG A+ L P + +     S  Y APE++    +Y    DLWS
Sbjct: 170 QNLLVNSKDNT--LKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWS 227
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILT----------------STELRFPPGAIEE-- 114
           +G +  +L+ GKP F G   +     I+                  TE+RFP    ++  
Sbjct: 228 IGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWR 287
Query: 115 -LHPD-----CVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAE 156
            + P+      +DL   +LR  P  RI   E   H F   LR +  +E
Sbjct: 288 KILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESE 335

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Query: 25  PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWSVGAILFQLVTG 83
           P LKI  FG+++S           G+P Y+APE++   +YD K AD+WS G  L+ ++ G
Sbjct: 154 PRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVG 213
Query: 84  KPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
             PF+   + + F+  +     +++       + P+C  L   +   +P +RI+  E  N
Sbjct: 214 AYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVADPAKRISIPEIRN 273
Query: 143 HRFL 146
           H + 
Sbjct: 274 HEWF 277

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 29  IGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPF 87
           + DFG  + ++       T CG+P Y+APE++    YD   D W +GA+L++++ G PPF
Sbjct: 180 LTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
Query: 88  DGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF 141
              N  +++ NIL    L+  P            L   LL+++  +R+  K+ F
Sbjct: 240 YSRNTAEMYDNILNKP-LQLKPNITN----SARHLLEGLLQKDRTKRLGAKDDF 288

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 13/125 (10%)
Query: 27  LKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG A  LT   +  +   G+P +MAPE+I+   YD KAD+WS+G    +L  G+P
Sbjct: 155 VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEP 214
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELH----PDCVDLCRCLLRQNPVERITFKEFF 141
           P    + +++   I  ++     P  +E  H     + V+ C   L ++P  R T KE  
Sbjct: 215 PNSDLHPMRVLFLIPKNS-----PPTLEGQHSKPFKEFVEAC---LNKDPRFRPTAKELL 266
Query: 142 NHRFL 146
            H+F+
Sbjct: 267 KHKFI 271

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 27  LKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   ++ +      L G+P +MAPE+I    Y  + D+WS+G ++ +++ G+P
Sbjct: 180 IKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEP 239
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL---CRCLLRQNPVERITFKEFFN 142
           P+     LQ  + I  S     PP  +++LH     L      +L + P +R T +E   
Sbjct: 240 PYFNEPPLQAMRRIRDS----LPP-RVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLG 294
Query: 143 HRFL 146
           H FL
Sbjct: 295 HPFL 298

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 66.2 bits (160), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 27  LKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   ++ +      L G+P +MAPE+I    Y  + D+WS+G ++ ++V G+P
Sbjct: 286 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 345
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
           P+     L+  + I  +   R     + ++ P        LL ++P +R T  E   H F
Sbjct: 346 PYFNEPPLKAMKMIRDNLPPRL--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 403
Query: 146 LGE 148
           L +
Sbjct: 404 LAK 406

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 27  LKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+GDFG AR L      A    G+P YM+PE +    Y+ K+D+WS+G +L++L    P
Sbjct: 155 VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELH 116
           PF   +Q +L   I      R P    +EL+
Sbjct: 215 PFTAFSQKELAGKIREGKFRRIPYRYSDELN 245

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 65.9 bits (159), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 27  LKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   ++ +      L G+P +MAPE+I    Y  + D+WS+G ++ ++V G+P
Sbjct: 166 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 225
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELH---PDCVDLCRCLLRQNPVERITFKEFFN 142
           P+     L+  + I  +     PP  ++ LH   P        LL ++P +R T  E   
Sbjct: 226 PYFNEPPLKAMKMIRDN----LPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 280
Query: 143 HRFLGE 148
           H FL +
Sbjct: 281 HPFLAK 286

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 27  LKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   ++ +      L G+P +MAPE+I    Y  + D+WS+G ++ ++V G+P
Sbjct: 209 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 268
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELH---PDCVDLCRCLLRQNPVERITFKEFFN 142
           P+     L+  + I  +     PP  ++ LH   P        LL ++P +R T  E   
Sbjct: 269 PYFNEPPLKAMKMIRDN----LPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323
Query: 143 HRFLGE 148
           H FL +
Sbjct: 324 HPFLAK 329

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 27  LKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   ++ +      L G+P +MAPE+I    Y  + D+WS+G ++ ++V G+P
Sbjct: 164 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 223
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELH---PDCVDLCRCLLRQNPVERITFKEFFN 142
           P+     L+  + I  +     PP  ++ LH   P        LL ++P +R T  E   
Sbjct: 224 PYFNEPPLKAMKMIRDN----LPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 278
Query: 143 HRFLGE 148
           H FL +
Sbjct: 279 HPFLAK 284

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 27  LKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   ++ +      L G+P +MAPE+I    Y  + D+WS+G ++ ++V G+P
Sbjct: 159 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 218
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELH---PDCVDLCRCLLRQNPVERITFKEFFN 142
           P+     L+  + I  +     PP  ++ LH   P        LL ++P +R T  E   
Sbjct: 219 PYFNEPPLKAMKMIRDN----LPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 273
Query: 143 HRFLGE 148
           H FL +
Sbjct: 274 HPFLAK 279

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 65.5 bits (158), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 15/153 (9%)
Query: 6   MIVSANACQNLLVSTNEVTP--VL-------KIGDFGFARSLTPQDLADTLCGSPLYMAP 56
           ++ + + C   +V   ++ P  VL       KI DFG +  ++  +     CGSP Y AP
Sbjct: 120 ILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAP 179
Query: 57  EIIQNHKYDA-KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEEL 115
           E+I    Y   + D+WS G IL+ L+ G  PFD  +   LF+ I        P    E L
Sbjct: 180 EVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGV-FYIP----EYL 234
Query: 116 HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE 148
           +     L   +L+ +P++R T K+   H +  +
Sbjct: 235 NRSVATLLMHMLQVDPLKRATIKDIREHEWFKQ 267

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 65.5 bits (158), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 27  LKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFGF   ++ +      L G+P +MAPE+I    Y  + D+WS+G ++ ++V G+P
Sbjct: 155 VKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEP 214
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELH---PDCVDLCRCLLRQNPVERITFKEFFN 142
           P+     L+  + I  +     PP  ++ LH   P        LL ++P +R T  E   
Sbjct: 215 PYFNEPPLKAMKMIRDN----LPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269
Query: 143 HRFLGE 148
           H FL +
Sbjct: 270 HPFLAK 275

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 4/142 (2%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           +N+L+        +KI DFG +   +    L D L G+  Y+APE+++  KY+ K D+WS
Sbjct: 175 ENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL-GTAYYIAPEVLK-KKYNEKCDVWS 232
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
            G I++ L+ G PPF G N   + + +    +  F     + +  +  +L + +L  +  
Sbjct: 233 CGVIMYILLCGYPPFGGQNDQDIIKKV-EKGKYYFDFNDWKNISDEAKELIKLMLTYDYN 291
Query: 133 ERITFKEFFNHRFLGELRQTVH 154
           +R T +E  N R++ +    ++
Sbjct: 292 KRCTAEEALNSRWIKKYANNIN 313

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +K+ DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 147 MLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   NI ++    F             D  R LL ++P  R+
Sbjct: 207 ITYILLSGASPFLGETKQETLTNI-SAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 265
Query: 136 TFKEFFNHRFL 146
              +   H ++
Sbjct: 266 XIAQSLEHSWI 276

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +K+ DFG A  +        + G+P ++APEI+       +AD+WS+G 
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   NI TS    F             D  R LL +   +R+
Sbjct: 207 ITYILLSGASPFLGDTKQETLANI-TSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL 265
Query: 136 TFKEFFNH 143
           T +E   H
Sbjct: 266 TIQEALRH 273

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +K+ DFG A  +        + G+P ++APEI+       +AD+WS+G 
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   NI TS    F             D  R LL +   +R+
Sbjct: 207 ITYILLSGASPFLGDTKQETLANI-TSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL 265
Query: 136 TFKEFFNH 143
           T +E   H
Sbjct: 266 TIQEALRH 273

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 1/128 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +K+ DFG A  +        + G+P ++APEI+       +AD+WS+G 
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   NI TS    F             D  R LL +   +R+
Sbjct: 207 ITYILLSGASPFLGDTKQETLANI-TSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRL 265
Query: 136 TFKEFFNH 143
           T +E   H
Sbjct: 266 TIQEALRH 273

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 1/132 (0%)
Query: 17  LVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI 76
           ++  N     +KI DFG AR   P++      G+P ++APE++         D+WSVG I
Sbjct: 218 ILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVI 277
Query: 77  LFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT 136
            + L++G  PF G N  +   NIL +          +++  +  +    LL +    RI+
Sbjct: 278 AYMLLSGLSPFLGDNDAETLNNIL-ACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRIS 336
Query: 137 FKEFFNHRFLGE 148
             E   H +L +
Sbjct: 337 ASEALKHPWLSD 348

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+L         +KI DFG A      + +    G+ LYMAPE+ +      K D+WS 
Sbjct: 153 ENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR-DVTFKCDIWSA 211
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIE--ELHPDCVDLCRCLLRQNP 131
           G +++ L+TG  PF G++ L+  Q   T  E   P  A+E   L P  VDL + +L ++P
Sbjct: 212 GVVMYFLLTGCLPFTGTS-LEEVQQKATYKE---PNYAVECRPLTPQAVDLLKQMLTKDP 267
Query: 132 VERITFKEFFNHRFLGE 148
             R +  +  +H +  +
Sbjct: 268 ERRPSAAQVLHHEWFKQ 284

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +K+ DFG A  +        + G+P ++APEI+       +AD+WS+G 
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   NI T+    F      +      D  R LL +   +R+
Sbjct: 207 ITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRL 265
Query: 136 TFKEFFNH 143
           T +E   H
Sbjct: 266 TIQEALRH 273

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +K+ DFG A  +        + G+P ++APEI+       +AD+WS+G 
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   NI T+    F      +      D  R LL +   +R+
Sbjct: 207 ITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRL 265
Query: 136 TFKEFFNH 143
           T +E   H
Sbjct: 266 TIQEALRH 273

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +K+ DFG A  +        + G+P ++APEI+       +AD+WS+G 
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206
Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   NI T+    F      +      D  R LL +   +R+
Sbjct: 207 ITYILLSGASPFLGDTKQETLANI-TAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRL 265
Query: 136 TFKEFFNH 143
           T +E   H
Sbjct: 266 TIQEALRH 273

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N++ +T      LK+ DFG    L P+       G+  + APE+ +        D+WSV
Sbjct: 284 ENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSV 342
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G + + L++G  PF G N  +  +N+  S +      A   +  D  D  R LL  +P  
Sbjct: 343 GVLSYILLSGLSPFGGENDDETLRNV-KSCDWNMDDSAFSGISEDGKDFIRKLLLADPNT 401
Query: 134 RITFKEFFNHRFL 146
           R+T  +   H +L
Sbjct: 402 RMTIHQALEHPWL 414

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 63.5 bits (153), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 2/133 (1%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N++ +T      LK+ DFG    L P+       G+  + APE+ +        D+WSV
Sbjct: 178 ENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSV 236
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G + + L++G  PF G N  +  +N+  S +      A   +  D  D  R LL  +P  
Sbjct: 237 GVLSYILLSGLSPFGGENDDETLRNV-KSCDWNMDDSAFSGISEDGKDFIRKLLLADPNT 295
Query: 134 RITFKEFFNHRFL 146
           R+T  +   H +L
Sbjct: 296 RMTIHQALEHPWL 308

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 73/154 (47%), Gaps = 3/154 (1%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QN+L+S+      +KI DFG +R +        + G+P Y+APEI+         D+W++
Sbjct: 160 QNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNI 219
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G I + L+T   PF G +  + + NI +   + +       +     D  + LL +NP +
Sbjct: 220 GIIAYMLLTHTSPFVGEDNQETYLNI-SQVNVDYSEETFSSVSQLATDFIQSLLVKNPEK 278
Query: 134 RITFKEFFNHRFLGE--LRQTVHAEQHSVVPETK 165
           R T +   +H +L +       H E+ S   +T+
Sbjct: 279 RPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQ 312

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 77/166 (46%), Gaps = 34/166 (20%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLW 71
           QNLL++       LK+GDFG AR+   P +   +   +  Y AP+++   + Y    D+W
Sbjct: 137 QNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIW 193
Query: 72  SVGAILFQLVTGKPPFDGSN---QLQLFQNIL-TSTELRFP------------------- 108
           S G IL +++TGKP F G+N   QL+L  +I+ T  E  +P                   
Sbjct: 194 SCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRD 253
Query: 109 ------PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE 148
                 P   E L  + +D    LL+ NP  R++ K+  +H +  E
Sbjct: 254 LRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 62.8 bits (151), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 27  LKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           L+I DFGFA+ L  ++ L  T C +  ++APE+++   YD   D+WS+G +L+ ++ G  
Sbjct: 164 LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYT 223
Query: 86  PFDG--SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           PF    S+  +     + S +     G    +     DL   +L  +P +R+T K+   H
Sbjct: 224 PFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
Query: 144 RFLGE-----LRQTVHAEQHSVVPETKPMVELLNSSTP 176
            ++ +       Q  H +   V          LNSS P
Sbjct: 284 PWVTQKDKLPQSQLSHQDLQLVKGAMAATYSALNSSKP 321

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFG +  L    +A++  G+  YM+PE +Q   Y  ++D+WS+G  L ++  G+ P
Sbjct: 163 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
Query: 87  F-DGSNQLQLFQ---NILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
              GS  + +F+    I+     + P G       D V+ C   L +NP ER   K+   
Sbjct: 222 IGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKC---LIKNPAERADLKQLMV 278
Query: 143 HRFL 146
           H F+
Sbjct: 279 HAFI 282

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 62.4 bits (150), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 68/131 (51%), Gaps = 11/131 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHKYDAKADLW 71
           +NLL +       +KI DFGFAR L P D     T C +  Y APE++  + YD   DLW
Sbjct: 135 ENLLFTDENDNLEIKIIDFGFAR-LKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLW 193
Query: 72  SVGAILFQLVTGKPPFDGSNQ-------LQLFQNILTSTELRFPPGAIEELHPDCVDLCR 124
           S+G IL+ +++G+ PF   ++       +++ + I    +  F   A + +  +  DL +
Sbjct: 194 SLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI-KKGDFSFEGEAWKNVSQEAKDLIQ 252
Query: 125 CLLRQNPVERI 135
            LL  +P +R+
Sbjct: 253 GLLTVDPNKRL 263

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 62.4 bits (150), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 8/158 (5%)
Query: 27  LKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           L+I DFGFA+ L  ++ L  T C +  ++APE+++   YD   D+WS+G +L+ ++ G  
Sbjct: 164 LRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYT 223
Query: 86  PFDG--SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH 143
           PF    S+  +     + S +     G    +     DL   +L  +P +R+T K+   H
Sbjct: 224 PFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
Query: 144 RFLGEL-----RQTVHAEQHSVVPETKPMVELLNSSTP 176
            ++ +       Q  H +   V          LNSS P
Sbjct: 284 PWVTQKDKLPQSQLSHQDLQLVKGAMAATYSALNSSKP 321

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 28  KIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           K+ DFG A  LT      + + G+P +MAPE+IQ   Y+  AD+WS+G    ++  GKPP
Sbjct: 165 KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIE--ELHPD-CVDLCRCLLRQNPVERITFKEFFNH 143
           +   + ++    I T+     PP      EL  D   D  +  L ++P +R T  +   H
Sbjct: 225 YADIHPMRAIFMIPTN-----PPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQH 279
Query: 144 RFL 146
            F+
Sbjct: 280 PFV 282

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 38/92 (41%), Positives = 52/92 (56%), Gaps = 19/92 (20%)
Query: 14  QNLLVS-TNEVTPVLKIGDFGFARSL----------TPQDLADTLCGSPLYMAPEIIQNH 62
           +N+L    N+V+PV KI DFG    +          TP+ L  T CGS  YMAPE+++  
Sbjct: 140 ENILCEHPNQVSPV-KICDFGLGSGIKLNGDCSPISTPELL--TPCGSAEYMAPEVVEAF 196
Query: 63  K-----YDAKADLWSVGAILFQLVTGKPPFDG 89
                 YD + DLWS+G IL+ L++G PPF G
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 23  VTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQN-----------HKYDAKA 68
           V  +LK+ DFG A  + P     + D+  G+  YM PE I++            K   K+
Sbjct: 189 VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 69  DLWSVGAILFQLVTGKPPFDG-SNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCL 126
           D+WS+G IL+ +  GK PF    NQ+     I+  + E+ FP   I E   D  D+ +C 
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD--IPE--KDLQDVLKCC 304
Query: 127 LRQNPVERITFKEFFNHRFL 146
           L+++P +RI+  E   H ++
Sbjct: 305 LKRDPKQRISIPELLAHPYV 324

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 24  TPVLKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT 82
           T V+K+GD G  R  + +  A  +L G+P YM+PE I  + Y+ K+D+WS+G +L+++  
Sbjct: 172 TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 231
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPP 109
            + PF G +++ L+       +  +PP
Sbjct: 232 LQSPFYG-DKMNLYSLCKKIEQCDYPP 257

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 23  VTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQN-----------HKYDAKA 68
           V  +LK+ DFG A  + P     + D+  G+  YM PE I++            K   K+
Sbjct: 189 VDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 69  DLWSVGAILFQLVTGKPPFDG-SNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCL 126
           D+WS+G IL+ +  GK PF    NQ+     I+  + E+ FP   I E   D  D+ +C 
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD--IPE--KDLQDVLKCC 304
Query: 127 LRQNPVERITFKEFFNHRFL 146
           L+++P +RI+  E   H ++
Sbjct: 305 LKRDPKQRISIPELLAHPYV 324

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDA--KAD 69
           NLL++T      LKI   G A +L P    D   T  GSP +  PEI       +  K D
Sbjct: 139 NLLLTTGGT---LKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVD 195
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +WS G  L+ + TG  PF+G N  +LF+NI   +     PG   +  P   DL + +L  
Sbjct: 196 IWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI--PG---DCGPPLSDLLKGMLEY 250
Query: 130 NPVERITFKEFFNHRFL 146
            P +R + ++   H + 
Sbjct: 251 EPAKRFSIRQIRQHSWF 267

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 23  VTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQN-----------HKYDAKA 68
           V  +LK+ DFG A  + P     + D+  G+  YM PE I++            K   K+
Sbjct: 189 VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 248
Query: 69  DLWSVGAILFQLVTGKPPFDG-SNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCL 126
           D+WS+G IL+ +  GK PF    NQ+     I+  + E+ FP    ++L     D+ +C 
Sbjct: 249 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ----DVLKCC 304
Query: 127 LRQNPVERITFKEFFNHRFL 146
           L+++P +RI+  E   H ++
Sbjct: 305 LKRDPKQRISIPELLAHPYV 324

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 23  VTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQN-----------HKYDAKA 68
           V  +LK+ DFG A  + P     + D+  G+  YM PE I++            K   K+
Sbjct: 142 VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 201
Query: 69  DLWSVGAILFQLVTGKPPFDG-SNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCL 126
           D+WS+G IL+ +  GK PF    NQ+     I+  + E+ FP   I E   D  D+ +C 
Sbjct: 202 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPD--IPE--KDLQDVLKCC 257
Query: 127 LRQNPVERITFKEFFNHRFL 146
           L+++P +RI+  E   H ++
Sbjct: 258 LKRDPKQRISIPELLAHPYV 277

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADT--LCGSPLYMAPEIIQNHKYDAKADLW 71
           QN+L+ +N+    LKI DFG A++L+   L  T  + G+  Y +PE  +    D   D++
Sbjct: 140 QNILIDSNKT---LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIY 196
Query: 72  SVGAILFQLVTGKPPFDGSNQLQL 95
           S+G +L++++ G+PPF+G   + +
Sbjct: 197 SIGIVLYEMLVGEPPFNGETAVSI 220

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 11/135 (8%)
Query: 27  LKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           ++I DFGFA+ L  ++ L  T C +  ++APE+++   YDA  D+WS+G +L+ ++TG  
Sbjct: 159 IRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYT 218
Query: 86  PF-DGSNQL--QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
           PF +G +    ++   I  S +     G    +     DL   +L  +P +R+T      
Sbjct: 219 PFANGPDDTPEEILARI-GSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277
Query: 143 HRFLGELRQTVHAEQ 157
           H ++      VH +Q
Sbjct: 278 HPWI------VHWDQ 286

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 23  VTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQN-----------HKYDAKA 68
           V  +LK+ DFG A  + P     + D+  G+  YM PE I++            K   K+
Sbjct: 161 VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 220
Query: 69  DLWSVGAILFQLVTGKPPFDG-SNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCL 126
           D+WS+G IL+ +  GK PF    NQ+     I+  + E+ FP    ++L     D+ +C 
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ----DVLKCC 276
Query: 127 LRQNPVERITFKEFFNHRFL 146
           L+++P +RI+  E   H ++
Sbjct: 277 LKRDPKQRISIPELLAHPYV 296

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 23  VTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQN-----------HKYDAKA 68
           V  +LK+ DFG A  + P     + D+  G+  YM PE I++            K   K+
Sbjct: 161 VDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 220
Query: 69  DLWSVGAILFQLVTGKPPFDG-SNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCL 126
           D+WS+G IL+ +  GK PF    NQ+     I+  + E+ FP    ++L     D+ +C 
Sbjct: 221 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ----DVLKCC 276
Query: 127 LRQNPVERITFKEFFNHRFL 146
           L+++P +RI+  E   H ++
Sbjct: 277 LKRDPKQRISIPELLAHPYV 296

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 23  VTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQN-----------HKYDAKA 68
           V  +LK+ DFG A  + P     + D+  G+  YM PE I++            K   K+
Sbjct: 145 VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 204
Query: 69  DLWSVGAILFQLVTGKPPFDG-SNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCL 126
           D+WS+G IL+ +  GK PF    NQ+     I+  + E+ FP    ++L     D+ +C 
Sbjct: 205 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ----DVLKCC 260
Query: 127 LRQNPVERITFKEFFNHRFL 146
           L+++P +RI+  E   H ++
Sbjct: 261 LKRDPKQRISIPELLAHPYV 280

>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           C N+ ++    T  +KIGD G A +L     A  + G+P + APE  +  KYD   D+++
Sbjct: 159 CDNIFITGP--TGSVKIGDLGLA-TLKRASFAKAVIGTPEFXAPEXYE-EKYDESVDVYA 214
Query: 73  VGAILFQLVTGKPPF-DGSNQLQLFQNILTSTELRFPPGAIEELH-PDCVDLCRCLLRQN 130
            G    +  T + P+ +  N  Q+++ + +  +    P + +++  P+  ++    +RQN
Sbjct: 215 FGXCXLEXATSEYPYSECQNAAQIYRRVTSGVK----PASFDKVAIPEVKEIIEGCIRQN 270
Query: 131 PVERITFKEFFNHRFLGE 148
             ER + K+  NH F  E
Sbjct: 271 KDERYSIKDLLNHAFFQE 288

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII-QNHKYDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 179 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 236
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 237 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 296
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 297 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 338

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII-QNHKYDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 230 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 287
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 288 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 347
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 348 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 389

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 20/140 (14%)
Query: 23  VTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQN-----------HKYDAKA 68
           V  +LK+ DFG A  + P     + D+  G+  YM PE I++            K   K+
Sbjct: 141 VDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKS 200
Query: 69  DLWSVGAILFQLVTGKPPFDG-SNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCL 126
           D+WS+G IL+ +  GK PF    NQ+     I+  + E+ FP    ++L     D+ +C 
Sbjct: 201 DVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQ----DVLKCC 256
Query: 127 LRQNPVERITFKEFFNHRFL 146
           L+++P +RI+  E   H ++
Sbjct: 257 LKRDPKQRISIPELLAHPYV 276

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII-QNHKYDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 187 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 244
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 245 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 304
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 305 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 346

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII-QNHKYDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 189 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 246
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 247 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 306
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 307 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 348

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII-QNHKYDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 185 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 242
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 243 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 302
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 303 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 156 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 213
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 214 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 273
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 274 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 315

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 345 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 400
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 401 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 456
Query: 128 RQNPVERITFKEF 140
           + NP +R +F E 
Sbjct: 457 QWNPSDRPSFAEI 469

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 71/162 (43%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII-QNHKYDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 185 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 242
Query: 73  VGAILFQLVTGKPPFDGS---NQLQLFQNILTS-------------TELRFPPGAIE--- 113
            G +L +L+ G+P F G    +QL     +L +             TE +FP        
Sbjct: 243 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 302
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 303 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 163 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 220
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 221 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 280
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 281 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 322

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQN--HKYDAKADLW 71
           N+L++T   + VLKI DFG ++ L   +   +T  G+  YMAPEII      Y   AD+W
Sbjct: 152 NVLINT--YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIW 209
Query: 72  SVGAILFQLVTGKPPFD--GSNQLQLFQ 97
           S+G  + ++ TGKPPF   G  Q  +F+
Sbjct: 210 SLGCTIIEMATGKPPFYELGEPQAAMFK 237

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 164 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 221
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 222 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 281
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 282 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 323

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 12/133 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 384 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 439
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 440 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 495
Query: 128 RQNPVERITFKEF 140
           + NP +R +F E 
Sbjct: 496 QWNPSDRPSFAEI 508

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 12/126 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADT----LCGSPLYMAPEIIQNHKYDAKADL 70
           N+++S    T  +K+ DFG AR++     + T    + G+  Y++PE  +    DA++D+
Sbjct: 146 NIMISA---TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 71  WSVGAILFQLVTGKPPFDGSNQLQL-FQNILTSTELRFPPGAIEE-LHPDCVDLCRCLLR 128
           +S+G +L++++TG+PPF G + + + +Q++    E   PP A  E L  D   +    L 
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDSPVSVAYQHV---REDPIPPSARHEGLSADLDAVVLKALA 259
Query: 129 QNPVER 134
           +NP  R
Sbjct: 260 KNPENR 265

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 12/126 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADT----LCGSPLYMAPEIIQNHKYDAKADL 70
           N+++S    T  +K+ DFG AR++     + T    + G+  Y++PE  +    DA++D+
Sbjct: 146 NIMISA---TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 71  WSVGAILFQLVTGKPPFDGSNQLQL-FQNILTSTELRFPPGAIEE-LHPDCVDLCRCLLR 128
           +S+G +L++++TG+PPF G + + + +Q++    E   PP A  E L  D   +    L 
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDSPVSVAYQHV---REDPIPPSARHEGLSADLDAVVLKALA 259
Query: 129 QNPVER 134
           +NP  R
Sbjct: 260 KNPENR 265

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 170 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 227
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 228 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 287
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 288 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 329

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 163 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 220
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 221 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 280
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 281 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 322

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 159 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 216
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 217 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 276
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 277 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 318

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 12/126 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADT----LCGSPLYMAPEIIQNHKYDAKADL 70
           N+++S    T  +K+ DFG AR++     + T    + G+  Y++PE  +    DA++D+
Sbjct: 146 NIMISA---TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 71  WSVGAILFQLVTGKPPFDGSNQLQL-FQNILTSTELRFPPGAIEE-LHPDCVDLCRCLLR 128
           +S+G +L++++TG+PPF G + + + +Q++    E   PP A  E L  D   +    L 
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDSPVSVAYQHV---REDPIPPSARHEGLSADLDAVVLKALA 259
Query: 129 QNPVER 134
           +NP  R
Sbjct: 260 KNPENR 265

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 151 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 268
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 155 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 212
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 213 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 272
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 273 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 314

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 4/120 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFG +  L   ++A+   G+  YM+PE +Q   Y  ++D+WS+G  L ++  G+ P
Sbjct: 147 IKLCDFGVSGQLI-DEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
                  +L   I+     + P         D V+ C   L +NP ER   K+   H F+
Sbjct: 206 RPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKC---LIKNPAERADLKQLMVHAFI 262

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 71/162 (43%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 151 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 73  VGAILFQLVTGKPPFDGS---NQLQLFQNILTS-------------TELRFPPGAIE--- 113
            G +L +L+ G+P F G    +QL     +L +             TE +FP        
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 268
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 151 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 268
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 70/126 (55%), Gaps = 12/126 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADT----LCGSPLYMAPEIIQNHKYDAKADL 70
           N+++S    T  +K+ DFG AR++     + T    + G+  Y++PE  +    DA++D+
Sbjct: 163 NIMISA---TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 219
Query: 71  WSVGAILFQLVTGKPPFDGSNQLQL-FQNILTSTELRFPPGAIEE-LHPDCVDLCRCLLR 128
           +S+G +L++++TG+PPF G + + + +Q++    E   PP A  E L  D   +    L 
Sbjct: 220 YSLGCVLYEVLTGEPPFTGDSPVSVAYQHV---REDPIPPSARHEGLSADLDAVVLKALA 276
Query: 129 QNPVER 134
           +NP  R
Sbjct: 277 KNPENR 282

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 151 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 268
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQN--HKYDAKADLW 71
           N+L++T   + VLKI DFG ++ L   +   +T  G+  YMAPEII      Y   AD+W
Sbjct: 138 NVLINT--YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIW 195
Query: 72  SVGAILFQLVTGKPPFD--GSNQLQLFQ 97
           S+G  + ++ TGKPPF   G  Q  +F+
Sbjct: 196 SLGCTIIEMATGKPPFYELGEPQAAMFK 223

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 71/162 (43%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 151 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 73  VGAILFQLVTGKPPFDGS---NQLQLFQNILTS-------------TELRFPPGAIE--- 113
            G +L +L+ G+P F G    +QL     +L +             TE +FP        
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 268
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 136 AARNCLVGENHL---VKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 247
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 248 QWNPSDRPSFAE 259

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 152 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 209
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE +FP        
Sbjct: 210 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWT 269
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 270 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 311

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 143 AARNCLVGENHL---VKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 254
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 255 QWNPSDRPSFAE 266

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 14/130 (10%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK-- 84
           +K+ DFG +  L    +A++  G+  YM+PE +Q   Y  ++D+WS+G  L ++  G+  
Sbjct: 144 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 85  -PPFDGSNQ-------LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT 136
            PP D            +L   I+     + P G       D V+ C   L +NP ER  
Sbjct: 203 IPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKC---LIKNPAERAD 259
Query: 137 FKEFFNHRFL 146
            K+   H F+
Sbjct: 260 LKQLMVHAFI 269

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 59.3 bits (142), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 136 AARNCLVGENHL---VKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 247
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 248 QWNPSDRPSFAE 259

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 139 AARNCLVGENHL---VKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 250
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 251 QWNPSDRPSFAE 262

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 71/126 (56%), Gaps = 12/126 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSL--TPQDLADT--LCGSPLYMAPEIIQNHKYDAKADL 70
           N+L+S    T  +K+ DFG AR++  +   +  T  + G+  Y++PE  +    DA++D+
Sbjct: 146 NILISA---TNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 71  WSVGAILFQLVTGKPPFDGSNQLQL-FQNILTSTELRFPPGAIEE-LHPDCVDLCRCLLR 128
           +S+G +L++++TG+PPF G + + + +Q++    E   PP A  E L  D   +    L 
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDSPVSVAYQHV---REDPIPPSARHEGLSADLDAVVLKALA 259
Query: 129 QNPVER 134
           +NP  R
Sbjct: 260 KNPENR 265

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 143 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 254
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 255 QWNPSDRPSFAE 266

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 27  LKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           ++I DFGFA+ L  ++ L  T C +  ++APE+++   YDA  D+WS+G +L+  +TG  
Sbjct: 159 IRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYT 218
Query: 86  PF 87
           PF
Sbjct: 219 PF 220

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 138 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 249
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 250 QWNPSDRPSFAE 261

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 143 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 254
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 255 QWNPSDRPSFAE 266

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 58.9 bits (141), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 140 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 251
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 252 QWNPSDRPSFAE 263

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 138 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 249
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 250 QWNPSDRPSFAE 261

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 138 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 249
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 250 QWNPSDRPSFAE 261

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 138 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 249
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 250 QWNPSDRPSFAE 261

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 142 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 197
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 198 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 253
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 254 QWNPSDRPSFAE 265

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 143 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 254
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 255 QWNPSDRPSFAE 266

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 143 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 198
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 199 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 254
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 255 QWNPSDRPSFAE 266

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 19/92 (20%)
Query: 14  QNLLVS-TNEVTPVLKIGDFGFARSL----------TPQDLADTLCGSPLYMAPEIIQNH 62
           +N+L    N+V+PV KI DF     +          TP+ L  T CGS  YMAPE+++  
Sbjct: 140 ENILCEHPNQVSPV-KICDFDLGSGIKLNGDCSPISTPELL--TPCGSAEYMAPEVVEAF 196
Query: 63  K-----YDAKADLWSVGAILFQLVTGKPPFDG 89
                 YD + DLWS+G IL+ L++G PPF G
Sbjct: 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 151 AARNCLVGENHL---VKVADFGLSRLMTG-DTYTAHAGAKFPIKWTAPESLAYNKFSIKS 206
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 207 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 262
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 263 QWNPSDRPSFAE 274

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 140 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 251
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 252 QWNPSDRPSFAE 263

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 29/161 (18%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA------RSLTPQDLAD--TLCGSPLYMAPEII-----Q 60
           +N+L  + E    +KI DF          S TP    +  T CGS  YMAPE++     Q
Sbjct: 140 ENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQ 199
Query: 61  NHKYDAKADLWSVGAILFQLVTGKPPFDGS---------------NQLQLFQNILTSTEL 105
              YD + DLWS+G +L+ +++G PPF G                 Q +LF++I    + 
Sbjct: 200 ATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESI-QEGKY 258
Query: 106 RFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
            FP      +  +  DL   LL ++  +R++  +   H ++
Sbjct: 259 EFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWV 299

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 138 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 249
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 250 QWNPSDRPSFAE 261

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 140 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 195
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 196 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 251
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 252 QWNPSDRPSFAE 263

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 9   SANACQNLL----VSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII-QNHK 63
           S N C   +    V  NE    LK+ DFG A+ L+P +       S  Y APE+I  N  
Sbjct: 149 SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQH 208
Query: 64  YDAKADLWSVGAILFQLVTGKPPFDGSN 91
           Y    D+WSVG I  +++ G+P F G N
Sbjct: 209 YTTAVDIWSVGCIFAEMMLGEPIFRGDN 236

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 136 AARNCLVGENHL---VKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNKFSIKS 191
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 192 DVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 247
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 248 QWNPSDRPSFAE 259

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 139 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNKFSIKS 194
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 195 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 250
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 251 QWNPSDRPSFAE 262

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 69/132 (52%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 138 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L R   
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRACW 249
Query: 128 RQNPVERITFKE 139
           + NP +R +F E
Sbjct: 250 QWNPSDRPSFAE 261

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 80/163 (49%), Gaps = 34/163 (20%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQ-----DLADTLCGSPLYMAPEIIQN-HKYDAKA 68
           NL ++T ++  VLKIGDFG AR + P       L++ L  +  Y +P ++ + + Y    
Sbjct: 150 NLFINTEDL--VLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAI 206
Query: 69  DLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTS---------------------TELRF 107
           D+W+ G I  +++TGK  F G+++L+  Q IL S                      ++  
Sbjct: 207 DMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTE 266
Query: 108 PPGAIEELHP----DCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           P   + +L P    + VD    +L  +P++R+T +E  +H ++
Sbjct: 267 PHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYM 309

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 68/162 (41%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 151 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFPPGAIE--- 113
            G +L +L+ G+P F G + +     I+                  TE  FP        
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWT 268
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/162 (31%), Positives = 70/162 (43%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           QNLL+  +  T VLK+ DFG A+ L   +   +   S  Y APE+I     Y +  D+WS
Sbjct: 151 QNLLLDPD--TAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWS 208
Query: 73  VGAILFQLVTGKPPFDGS---NQLQLFQNILTS-------------TELRFPPGAIE--- 113
            G +L +L+ G+P F G    +QL     +L +             TE  FP        
Sbjct: 209 AGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWT 268
Query: 114 -----ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                   P+ + LC  LL   P  R+T  E   H F  ELR
Sbjct: 269 KVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 310

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           ++I D G A  +          G+  YMAPE+++N +Y    D W++G +L++++ G+ P
Sbjct: 325 IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F    + ++ +  +       P    E   P    LC  LL ++P ER+
Sbjct: 385 FQQRKK-KIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERL 432

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 12/126 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADT----LCGSPLYMAPEIIQNHKYDAKADL 70
           N+++S    T  +K+ DFG AR++     + T    + G+  Y++PE  +    DA++D+
Sbjct: 146 NIMISA---TNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 71  WSVGAILFQLVTGKPPFDGSNQLQL-FQNILTSTELRFPPGAIEE-LHPDCVDLCRCLLR 128
           +S+G +L++++TG+PPF G +   + +Q++    E   PP A  E L  D   +    L 
Sbjct: 203 YSLGCVLYEVLTGEPPFTGDSPDSVAYQHV---REDPIPPSARHEGLSADLDAVVLKALA 259
Query: 129 QNPVER 134
           +NP  R
Sbjct: 260 KNPENR 265

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 18/151 (11%)
Query: 27  LKIGDFGF-ARSLTPQDLADTLCGSPLYMAPEII-----QNHKYDAKADLWSVGAILFQL 80
           +++ DFG  A++L      D+  G+P +MAPE++     ++  YD KAD+WS+G  L ++
Sbjct: 156 IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
Query: 81  VTGKPPFDGSNQLQLFQNILTSTELRFPPGAI--EELHPDCVDLCRCLLRQNPVERITFK 138
              +PP    N +++   I  S     PP  +   +   +  D  +  L +NP  R +  
Sbjct: 216 AQIEPPHHELNPMRVLLKIAKSD----PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAA 271
Query: 139 EFFNHRFLGE------LRQTVHAEQHSVVPE 163
           +   H F+        LR+ V   +  V+ E
Sbjct: 272 QLLEHPFVSSITSNKALRELVAEAKAEVMEE 302

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 64/157 (40%), Gaps = 37/157 (23%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+ +   +      +  Y APE+I    Y    D+WSVG I+ +LV G   
Sbjct: 163 LKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVI 222
Query: 87  FDGSNQLQLFQNILT-----STELR----------------FPPGAIEELHPDCV----- 120
           F G++ +  +  ++      S E                  +P  A EEL PD +     
Sbjct: 223 FQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSES 282
Query: 121 -----------DLCRCLLRQNPVERITFKEFFNHRFL 146
                      DL   +L  +P +RI+  E   H ++
Sbjct: 283 ERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYI 319

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 144 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 200
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 201 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE--------------CQHLIRWCLAL 246
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 247 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 282

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 9/148 (6%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD-----TLCGSPLYMAPEIIQ--NHKYDA 66
           +N L STN+   + K+ DFG ++     +  +     T  G+P ++APE++   N  Y  
Sbjct: 197 ENFLFSTNKSFEI-KLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255
Query: 67  KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           K D WS G +L  L+ G  PF G N       +L + +L F       L P   DL   L
Sbjct: 256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVL-NKKLCFENPNYNVLSPLARDLLSNL 314
Query: 127 LRQNPVERITFKEFFNHRFLGELRQTVH 154
           L +N  ER        H ++ +    ++
Sbjct: 315 LNRNVDERFDAMRALQHPWISQFSDKIY 342

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 172 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 228
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 229 LGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE--------------CQHLIRWCLAL 274
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 275 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 172 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 228
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 229 LGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE--------------CQHLIRWCLAL 274
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 275 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 27  LKIGDFGF-ARSLTPQDLADTLCGSPLYMAPEII-----QNHKYDAKADLWSVGAILFQL 80
           +++ DFG  A++L      D+  G+P +MAPE++     ++  YD KAD+WS+G  L ++
Sbjct: 148 IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 207
Query: 81  VTGKPPFDGSNQLQLFQNILTSTELRFPPGAI--EELHPDCVDLCRCLLRQNPVERITFK 138
              +PP    N +++   I  S     PP  +   +   +  D  +  L +NP  R +  
Sbjct: 208 AQIEPPHHELNPMRVLLKIAKSD----PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAA 263
Query: 139 EFFNHRFLGEL 149
           +   H F+  +
Sbjct: 264 QLLEHPFVSSI 274

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           ++I D G A  +          G+  YMAPE+++N +Y    D W++G +L++++ G+ P
Sbjct: 325 IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           F    + ++ +  +       P    E   P    LC  LL ++P ER+
Sbjct: 385 FQQRKK-KIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERL 432

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 186 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 242
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 243 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE--------------CQHLIRWCLAL 288
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 289 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 324

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 144 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 200
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 201 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE--------------CQHLIRWCLAL 246
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 247 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 282

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 159 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 215
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 216 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE--------------CQHLIRWCLAL 261
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 262 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 297

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 171 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 227
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 228 LGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE--------------CQHLIRWCLAL 273
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 274 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 309

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 171 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 227
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 228 LGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE--------------CQHLIRWCLAL 273
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 274 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 309

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 171 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 227
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 228 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE--------------CQHLIRWCLAL 273
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 274 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 309

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 144 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 200
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 201 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE--------------CQHLIRWCLAL 246
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 247 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 282

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 143 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 199
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 200 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE--------------CQHLIRWCLAL 245
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 246 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 281

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 158 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 214
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 215 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE--------------CQHLIRWCLAL 260
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 261 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 296

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 143 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 199
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 200 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE--------------CQHLIRWCLAL 245
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 246 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 281

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 178 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 234
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 235 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE--------------CQHLIRWCLAL 280
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 281 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 316

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 186 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 242
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 243 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE--------------CQHLIRWCLAL 288
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 289 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 324

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 37/167 (22%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y A  D+WSVG I+ +LV G   
Sbjct: 165 LKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVI 224
Query: 87  FDGSNQLQLFQNILT-----STEL----------------RFPPGAIEELHPDCV----- 120
           F G++ +  +  ++      S E                 ++P    EEL PD +     
Sbjct: 225 FQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSES 284
Query: 121 -----------DLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAE 156
                      DL   +L  +P +RI+  E   H ++        AE
Sbjct: 285 ERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWYDPAEAE 331

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 159 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 215
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S E              C  L R  L  
Sbjct: 216 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE--------------CQHLIRWCLAL 261
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 262 RPXDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 297

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ N V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 184 AARNVLVTENNV---MKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM----MMRDCW 296
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 297 HAVPSQRPTFKQL 309

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 172 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 228
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S E              C  L R  L  
Sbjct: 229 LGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXE--------------CQHLIRWCLAL 274
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 275 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ N V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 184 AARNVLVTENNV---MKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM----MMRDCW 296
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 297 HAVPSQRPTFKQL 309

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 172 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 228
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S E              C  L R  L  
Sbjct: 229 LGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXE--------------CQHLIRWCLAL 274
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 275 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ N V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 184 AARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM----MMRDCW 296
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 297 HAVPSQRPTFKQL 309

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ N V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 184 AARNVLVTENNV---MKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM----MMRDCW 296
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 297 HAVPSQRPTFKQL 309

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKAD 69
           A  N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D
Sbjct: 141 AAANILVGENLVC---KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLL 127
           +WS G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  
Sbjct: 198 VWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-W 252
Query: 128 RQNPVERITFK 138
           R++P ER TF+
Sbjct: 253 RKDPEERPTFE 263

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 171 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 227
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S E              C  L R  L  
Sbjct: 228 LGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXE--------------CQHLIRWCLAL 273
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 274 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 309

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ N V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 184 AARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM----MMRDCW 296
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 297 HAVPSQRPTFKQL 309

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ N V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 184 AARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM----MMRDCW 296
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 297 HAVPSQRPTFKQL 309

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 191 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 247
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S E              C  L R  L  
Sbjct: 248 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE--------------CQHLIRWCLAL 293
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 294 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 329

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 186 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 242
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S E              C  L R  L  
Sbjct: 243 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE--------------CQHLIRWCLAL 288
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 289 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 324

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ N V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 184 AARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM----MMRDCW 296
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 297 HAVPSQRPTFKQL 309

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ N V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 184 AARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM----MMRDCW 296
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 297 HAVPSQRPTFKQL 309

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 72/130 (55%), Gaps = 16/130 (12%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQ--NHKYDAKAD 69
           +N+L+ +N     + + DFG ++     +   A   CG+  YMAP+I++  +  +D   D
Sbjct: 188 ENILLDSN---GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVD 244
Query: 70  LWSVGAILFQLVTGKPPF--DG--SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRC 125
            WS+G ++++L+TG  PF  DG  ++Q ++ + IL S     PP   +E+     DL + 
Sbjct: 245 WWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE----PPYP-QEMSALAKDLIQR 299
Query: 126 LLRQNPVERI 135
           LL ++P +R+
Sbjct: 300 LLMKDPKKRL 309

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 159 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 215
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S E              C  L R  L  
Sbjct: 216 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE--------------CQHLIRWCLAL 261
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 262 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 297

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 158 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 214
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S E              C  L R  L  
Sbjct: 215 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE--------------CQHLIRWCLAL 260
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 261 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 296

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ N V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 173 AARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 229
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 230 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM----MMRDCW 285
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 286 HAVPSQRPTFKQL 298

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 166 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 222
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S E              C  L R  L  
Sbjct: 223 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE--------------CQHLIRWCLAL 268
Query: 130 NPVERITFKEFFNHRFLGEL---RQTVHAEQHSVVP 162
            P +R TF+E  NH ++ ++   ++T     HS+ P
Sbjct: 269 RPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 304

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ N V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 176 AARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 232
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 233 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM----MMRDCW 288
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 289 HAVPSQRPTFKQL 301

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 27  LKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           ++I D G A  L   Q       G+P +MAPE++   +YD   D +++G  L++++  + 
Sbjct: 328 VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 86  PFDGSNQ----LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
           PF    +     +L Q +L    + +P    ++  P   D C  LL+++P +R+ F++
Sbjct: 388 PFRARGEKVENKELKQRVLEQA-VTYP----DKFSPASKDFCEALLQKDPEKRLGFRD 440

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 27  LKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           ++I D G A  L   Q       G+P +MAPE++   +YD   D +++G  L++++  + 
Sbjct: 328 VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 86  PFDGSNQ----LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
           PF    +     +L Q +L    + +P    ++  P   D C  LL+++P +R+ F++
Sbjct: 388 PFRARGEKVENKELKQRVLEQA-VTYP----DKFSPASKDFCEALLQKDPEKRLGFRD 440

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 27  LKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           ++I D G A  L   Q       G+P +MAPE++   +YD   D +++G  L++++  + 
Sbjct: 328 VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 86  PFDGSNQ----LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
           PF    +     +L Q +L    + +P    ++  P   D C  LL+++P +R+ F++
Sbjct: 388 PFRARGEKVENKELKQRVLEQA-VTYP----DKFSPASKDFCEALLQKDPEKRLGFRD 440

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ N V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 230 AARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 286
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 287 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM----MMRDCW 342
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 343 HAVPSQRPTFKQL 355

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 27  LKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           ++I D G A  L   Q       G+P +MAPE++   +YD   D +++G  L++++  + 
Sbjct: 328 VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARG 387
Query: 86  PFDGSNQ----LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
           PF    +     +L Q +L    + +P    ++  P   D C  LL+++P +R+ F++
Sbjct: 388 PFRARGEKVENKELKQRVLEQA-VTYP----DKFSPASKDFCEALLQKDPEKRLGFRD 440

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-YMAPEIIQNHKYDAKADL 70
           A +N+LV  N V    KI DFG +R      +  T+   P+ +MA E +    Y   +D+
Sbjct: 169 AARNILVGENYVA---KIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDV 224
Query: 71  WSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           WS G +L+++V+ G  P+ G    +L++ +     L  P    +E++    DL R   R+
Sbjct: 225 WSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVY----DLMRQCWRE 280
Query: 130 NPVERITFKEFFN--HRFLGELRQTVH 154
            P ER +F +     +R L E +  V+
Sbjct: 281 KPYERPSFAQILVSLNRMLEERKTYVN 307

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 31/166 (18%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEI-IQNHKYDAKADLW 71
           +N+L++ + V   +K+ DFGFAR LT P D  D    +  Y +PE+ + + +Y    D+W
Sbjct: 131 ENILITKHSV---IKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVW 187
Query: 72  SVGAILFQLVTGKPPFDGS---NQLQLFQNILT----------STELRFPPGAI---EEL 115
           ++G +  +L++G P + G    +QL L +  L           ST   F    I   E++
Sbjct: 188 AIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDM 247
Query: 116 HP----------DCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ 151
            P            + L +  L  +P ER+T ++  +H +   +R+
Sbjct: 248 EPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 175 AARNILLSEKNV---VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS 231
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 287
Query: 127 LRQNPVERITFKEFFNHRFLGELRQ 151
               P +R TF E   H  LG L Q
Sbjct: 288 WHGEPSQRPTFSELVEH--LGNLLQ 310

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-YMAPEIIQNHKYDAKADL 70
           A +N+LV  N V    KI DFG +R      +  T+   P+ +MA E +    Y   +D+
Sbjct: 159 AARNILVGENYVA---KIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDV 214
Query: 71  WSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           WS G +L+++V+ G  P+ G    +L++ +     L  P    +E++    DL R   R+
Sbjct: 215 WSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVY----DLMRQCWRE 270
Query: 130 NPVERITFKEFFN--HRFLGELRQTVH 154
            P ER +F +     +R L E +  V+
Sbjct: 271 KPYERPSFAQILVSLNRMLEERKTYVN 297

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 12/147 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-YMAPEIIQNHKYDAKADL 70
           A +N+LV  N V    KI DFG +R      +  T+   P+ +MA E +    Y   +D+
Sbjct: 166 AARNILVGENYVA---KIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDV 221
Query: 71  WSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           WS G +L+++V+ G  P+ G    +L++ +     L  P    +E++    DL R   R+
Sbjct: 222 WSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCDDEVY----DLMRQCWRE 277
Query: 130 NPVERITFKEFFN--HRFLGELRQTVH 154
            P ER +F +     +R L E +  V+
Sbjct: 278 KPYERPSFAQILVSLNRMLEERKTYVN 304

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 171 AARNILLSEKNV---VKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 227
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F   L   T +R P     E++   +D C   
Sbjct: 228 DVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKEGTRMRAPDYTTPEMYQTMLD-C--- 283
Query: 127 LRQNPVERITFKEFFNHRFLGELRQ 151
               P +R TF E   H  LG L Q
Sbjct: 284 WHGEPSQRPTFSELVEH--LGNLLQ 306

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 144 NILVGENLVC---KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R++
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKD 255
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 256 PEERPTFE 263

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 144 NILVGENLVC---KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R++
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKD 255
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 256 PEERPTFE 263

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 166 AARNILLSEKNV---VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS 222
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 278
Query: 127 LRQNPVERITFKEFFNHRFLGELRQ 151
               P +R TF E   H  LG L Q
Sbjct: 279 WHGEPSQRPTFSELVEH--LGNLLQ 301

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 144 NILVGENLVC---KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R++
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKD 255
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 256 PEERPTFE 263

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 144 NILVGENLVC---KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R++
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKD 255
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 256 PEERPTFE 263

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 166 AARNILLSEKNV---VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS 222
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 278
Query: 127 LRQNPVERITFKEFFNHRFLGELRQ 151
               P +R TF E   H  LG L Q
Sbjct: 279 WHGEPSQRPTFSELVEH--LGNLLQ 301

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ N V   ++I DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 184 AARNVLVTENNV---MRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM----MMRDCW 296
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 297 HAVPSQRPTFKQL 309

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 135 NILVGENLVC---KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 191
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R++
Sbjct: 192 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKD 246
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 247 PEERPTFE 254

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 133 NILVGENLVC---KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 189
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R++
Sbjct: 190 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKD 244
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 245 PEERPTFE 252

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 144 NILVGENLVC---KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R++
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKD 255
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 256 PEERPTFE 263

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 27  LKIGDFGF-ARSLTPQDLADTLCGSPLYMAPEII-----QNHKYDAKADLWSVGAILFQL 80
           +K+ DFG  A++       D+  G+P +MAPE++     ++  YD KAD+WS+G  L ++
Sbjct: 174 IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
Query: 81  VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIE--ELHPDCVDLCRCLLRQNPVERITFK 138
              +PP    N +++   I  S     PP   +      +  D  +  L +N   R T  
Sbjct: 234 AEIEPPHHELNPMRVLLKIAKSE----PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTS 289
Query: 139 EFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPE 177
           +   H F+              V   KP+ EL+  +  E
Sbjct: 290 QLLQHPFV-------------TVDSNKPIRELIAEAKAE 315

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 393 NILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 449
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R+ 
Sbjct: 450 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKE 504
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 505 PEERPTFE 512

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 144 NILVGENLVC---KVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R++
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKD 255
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 256 PEERPTFE 263

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR    +     +  +  Y APE+I N  +Y    D+WSVG I+ +++TGK 
Sbjct: 167 LKILDFGLARQADSEMXGXVV--TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT 224
Query: 86  PFDGSNQLQLFQNILTST 103
            F GS+ L   + I+  T
Sbjct: 225 LFKGSDHLDQLKEIMKVT 242

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 144 NILVGENLVC---KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 200
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R++
Sbjct: 201 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKD 255
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 256 PEERPTFE 263

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 27  LKIGDFGF-ARSLTPQDLADTLCGSPLYMAPEII-----QNHKYDAKADLWSVGAILFQL 80
           +K+ DFG  A++       D+  G+P +MAPE++     ++  YD KAD+WS+G  L ++
Sbjct: 174 IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
Query: 81  VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIE--ELHPDCVDLCRCLLRQNPVERITFK 138
              +PP    N +++   I  S     PP   +      +  D  +  L +N   R T  
Sbjct: 234 AEIEPPHHELNPMRVLLKIAKSE----PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTS 289
Query: 139 EFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPE 177
           +   H F+              V   KP+ EL+  +  E
Sbjct: 290 QLLQHPFV-------------TVDSNKPIRELIAEAKAE 315

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 175 AARNILLSEKNV---VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS 231
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 287
Query: 127 LRQNPVERITFKEFFNHRFLGELRQ 151
               P +R TF E   H  LG L Q
Sbjct: 288 WHGEPSQRPTFSELVEH--LGNLLQ 310

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 175 AARNILLSEKNV---VKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS 231
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 287
Query: 127 LRQNPVERITFKEFFNHRFLGELRQ 151
               P +R TF E   H  LG L Q
Sbjct: 288 WHGEPSQRPTFSELVEH--LGNLLQ 310

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 53/89 (59%), Gaps = 5/89 (5%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEI-IQNHKYDAKADLW 71
           +N+LVS    + V+K+ DFGFAR+L  P ++ D    +  Y APE+ + + KY    D+W
Sbjct: 153 ENILVSQ---SGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVW 209
Query: 72  SVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           ++G ++ ++  G+P F G + +    +I+
Sbjct: 210 AIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+++       + KI D G+A+ L   +L     G+  Y+APE+++  KY    D WS 
Sbjct: 151 ENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 210
Query: 74  GAILFQLVTGKPPF 87
           G + F+ +TG  PF
Sbjct: 211 GTLAFECITGFRPF 224

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N    V K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 310 NILVGEN---LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R+ 
Sbjct: 367 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKE 421
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 422 PEERPTFE 429

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ + V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 177 AARNVLVTEDNV---MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM----MMRDCW 289
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 290 HAVPSQRPTFKQL 302

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+++       + KI D G+A+ L   +L     G+  Y+APE+++  KY    D WS 
Sbjct: 150 ENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 209
Query: 74  GAILFQLVTGKPPF 87
           G + F+ +TG  PF
Sbjct: 210 GTLAFECITGFRPF 223

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ + V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 177 AARNVLVTEDNV---MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T G  P+ G    +LF+ +     +  P     EL+    D    + 
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAV- 292
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 293 ---PSQRPTFKQL 302

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 175 AARNILLSEKNV---VKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQS 231
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 287
Query: 127 LRQNPVERITFKEFFNHRFLGELRQ 151
               P +R TF E   H  LG L Q
Sbjct: 288 WHGEPSQRPTFSELVEH--LGNLLQ 310

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N    V K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 310 NILVGEN---LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R+ 
Sbjct: 367 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKE 421
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 422 PEERPTFE 429

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N    V K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 310 NILVGEN---LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 366
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R+ 
Sbjct: 367 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKE 421
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 422 PEERPTFE 429

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 26  VLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +LKI DFG AR    +    +  G+  +MAPE+I+   +   +D+WS G +L++L+TG+ 
Sbjct: 154 ILKITDFGLAREWH-RTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV 212
Query: 86  PFDGSNQLQLFQNI-LTSTELRFP---PGAIEELHPDC 119
           PF G + L +   + +    L  P   P    +L  DC
Sbjct: 213 PFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDC 250

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ + V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 170 AARNVLVTEDNV---MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 226
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 227 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM----MMRDCW 282
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 283 HAVPSQRPTFKQL 295

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ + V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 169 AARNVLVTEDNV---MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 225
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 226 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM----MMRDCW 281
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 282 HAVPSQRPTFKQL 294

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ + V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 177 AARNVLVTEDNV---MKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM----MMRDCW 289
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 290 HAVPSQRPTFKQL 302

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 12/132 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N V   +K+ DFG +R +T  D      G+     + APE +  + +  K+
Sbjct: 157 AARNCLVGENHV---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNTFSIKS 212
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ T G  P+ G +  Q++  +     +  P G      P   +L R   
Sbjct: 213 DVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPEGC----PPKVYELMRACW 268
Query: 128 RQNPVERITFKE 139
           + +P +R +F E
Sbjct: 269 KWSPADRPSFAE 280

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ + V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 166 AARNVLVTEDNV---MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 222
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 223 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM----MMRDCW 278
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 279 HAVPSQRPTFKQL 291

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 55.5 bits (132), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 141 NILVGENLVC---KVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R+ 
Sbjct: 198 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKE 252
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 253 PEERPTFE 260

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ + V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 218 AARNVLVTEDNV---MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 274
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T G  P+ G    +LF+ +     +  P     EL+    D    + 
Sbjct: 275 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAV- 333
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 334 ---PSQRPTFKQL 343

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 55.1 bits (131), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 137 NILVGENLVC---KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 193
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R+ 
Sbjct: 194 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKE 248
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 249 PEERPTFE 256

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 193 LKILDFGLARHT--DDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT 250
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAI 112
            F G++ +   Q I+  T    PP ++
Sbjct: 251 LFPGTDHINQLQQIMRLTGT--PPASV 275

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ + V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 177 AARNVLVTEDNV---MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 233
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 234 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM----MMRDCW 289
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 290 HAVPSQRPTFKQL 302

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 166 AARNILLSEKNV---VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 222
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 278
Query: 127 LRQNPVERITFKEFFNHRFLGELRQ 151
               P +R TF E   H  LG L Q
Sbjct: 279 WHGEPSQRPTFSELVEH--LGNLLQ 301

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 134 NILVGENLVC---KVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 190
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R+ 
Sbjct: 191 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKE 245
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 246 PEERPTFE 253

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 218 AARNILLSEKNV---VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 274
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 275 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 330
Query: 127 LRQNPVERITFKEFFNHRFLGELRQ 151
               P +R TF E   H  LG L Q
Sbjct: 331 WHGEPSQRPTFSELVEH--LGNLLQ 353

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ----NHKYDAKADLWSVGAILFQLVT 82
           +K+ DFG +  L          G   YMAPE I        YD ++D+WS+G  L++L T
Sbjct: 165 IKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELAT 224
Query: 83  GKPPFDGSNQL--QLFQNI------LTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
           G+ P+   N +  QL Q +      L+++E R       E  P  ++     L ++  +R
Sbjct: 225 GRFPYPKWNSVFDQLTQVVKGDPPQLSNSEER-------EFSPSFINFVNLCLTKDESKR 277
Query: 135 ITFKEFFNHRFL 146
             +KE   H F+
Sbjct: 278 PKYKELLKHPFI 289

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N V    K+ DFG AR +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 141 NILVGENLVC---KVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 197
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R+ 
Sbjct: 198 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKE 252
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 253 PEERPTFE 260

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 71/163 (43%), Gaps = 34/163 (20%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQ----DLADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P+            +  Y APEI+ N K Y    D
Sbjct: 174 NLLINT---TCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSID 230
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL------------------TSTELRFPPG- 110
           +WSVG IL ++++ +P F G + L    +IL                      L+  P  
Sbjct: 231 IWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSK 290
Query: 111 ---AIEELHP----DCVDLCRCLLRQNPVERITFKEFFNHRFL 146
              A  +L P      +DL   +L  NP +RIT +E   H +L
Sbjct: 291 TKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYL 333

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 166 AARNILLSEKNV---VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 222
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 223 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 278
Query: 127 LRQNPVERITFKEFFNHRFLGELRQ 151
               P +R TF E   H  LG L Q
Sbjct: 279 WHGEPSQRPTFSELVEH--LGNLLQ 301

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 177 AARNILLSEKNV---VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 233
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 234 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 289
Query: 127 LRQNPVERITFKEFFNHRFLGELRQT 152
               P +R TF E   H  LG L Q 
Sbjct: 290 WHGEPSQRPTFSELVEH--LGNLLQA 313

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 11/131 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKADL 70
           +N+LV+ N V   +KI DFG AR +   D         L   +MAPE + +  Y  ++D+
Sbjct: 173 RNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDV 229
Query: 71  WSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           WS G +++++ T G  P+ G    +LF+ +     +  P     EL+     + R     
Sbjct: 230 WSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYM----MMRDCWHA 285
Query: 130 NPVERITFKEF 140
            P +R TFK+ 
Sbjct: 286 VPSQRPTFKQL 296

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 21/140 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 142 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 198
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 199 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE--------------CQHLIRWCLAL 244
Query: 130 NPVERITFKEFFNHRFLGEL 149
            P +R TF+E  NH ++ ++
Sbjct: 245 RPSDRPTFEEIQNHPWMQDV 264

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 171 AARNILLSEKNV---VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 227
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 228 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 283
Query: 127 LRQNPVERITFKEFFNHRFLGELRQ 151
               P +R TF E   H  LG L Q
Sbjct: 284 WHGEPSQRPTFSELVEH--LGNLLQ 306

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 68/159 (42%), Gaps = 25/159 (15%)
Query: 27  LKIGDFGF-ARSLTPQDLADTLCGSPLYMAPEII-----QNHKYDAKADLWSVGAILFQL 80
           +K+ DFG  A++       D   G+P +MAPE++     ++  YD KAD+WS+G  L ++
Sbjct: 174 IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 233
Query: 81  VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIE--ELHPDCVDLCRCLLRQNPVERITFK 138
              +PP    N +++   I  S     PP   +      +  D  +  L +N   R T  
Sbjct: 234 AEIEPPHHELNPMRVLLKIAKSE----PPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTS 289
Query: 139 EFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPE 177
           +   H F+              V   KP+ EL+  +  E
Sbjct: 290 QLLQHPFV-------------TVDSNKPIRELIAEAKAE 315

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    T   KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 149 NILVSD---TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 205
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+     L R   ++ P
Sbjct: 206 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLCWKERP 261
Query: 132 VERITF 137
            +R TF
Sbjct: 262 EDRPTF 267

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    T   KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 144 NILVSD---TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 200
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+     L R   ++ P
Sbjct: 201 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLCWKERP 256
Query: 132 VERITF 137
            +R TF
Sbjct: 257 EDRPTF 262

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    T   KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 145 NILVSD---TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 201
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+     L R   ++ P
Sbjct: 202 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLCWKERP 257
Query: 132 VERITF 137
            +R TF
Sbjct: 258 EDRPTF 263

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ + V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 162 AARNVLVTEDNV---MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 218
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T G  P+ G    +LF+ +     +  P     EL+     + R   
Sbjct: 219 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYM----MMRDCW 274
Query: 128 RQNPVERITFKEF 140
              P +R TFK+ 
Sbjct: 275 HAVPSQRPTFKQL 287

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 225 AARNILLSEKNV---VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 281
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 282 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 337
Query: 127 LRQNPVERITFKEFFNHRFLGELRQT 152
               P +R TF E   H  LG L Q 
Sbjct: 338 WHGEPSQRPTFSELVEH--LGNLLQA 361

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 220 AARNILLSEKNV---VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 276
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 277 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 332
Query: 127 LRQNPVERITFKEFFNHRFLGELRQ 151
               P +R TF E   H  LG L Q
Sbjct: 333 WHGEPSQRPTFSELVEH--LGNLLQ 355

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 14/143 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S N V   +KI DFG AR +   P  +       PL +MAPE I +  Y  K+
Sbjct: 226 AARNILLSENNV---VKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKS 282
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F   +     +R P  +  E++   +D   C 
Sbjct: 283 DVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLD---CW 339
Query: 127 LRQNPVERITFKEFFNHRFLGEL 149
            R +P ER  F E      LG+L
Sbjct: 340 HR-DPKERPRFAELVEK--LGDL 359

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 21/140 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 139 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 195
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 196 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSE--------------CQHLIRWCLAL 241
Query: 130 NPVERITFKEFFNHRFLGEL 149
            P +R TF+E  NH ++ ++
Sbjct: 242 RPSDRPTFEEIQNHPWMQDV 261

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 227 AARNILLSEKNV---VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 283
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 284 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 339
Query: 127 LRQNPVERITFKEFFNHRFLGELRQT 152
               P +R TF E   H  LG L Q 
Sbjct: 340 WHGEPSQRPTFSELVEH--LGNLLQA 363

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 175 AARNILLSEKNV---VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 231
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 287
Query: 127 LRQNPVERITFKEFFNHRFLGELRQ 151
               P +R TF E   H  LG L Q
Sbjct: 288 WHGEPSQRPTFSELVEH--LGNLLQ 310

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 29/161 (18%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQ-NHKYDAKADLW 71
           QNLL++       LKI DFG AR+   P         +  Y AP+++  + KY    D+W
Sbjct: 129 QNLLINRE---GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 72  SVGAILFQLVTGKPPFDG---SNQLQLFQNILTS---------TEL-RFPPG-------- 110
           SVG I  ++V G P F G   ++QL     IL +         TEL ++ P         
Sbjct: 186 SVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLP 245
Query: 111 ---AIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE 148
               ++ L    +DL   +L+ +P +RIT K+   H +  E
Sbjct: 246 WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 27/162 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII-QNHKYDAKADLWS 72
           QNLL+  +  + VLK+ DFG A+ L   +   +   S  Y APE+I     Y    D+WS
Sbjct: 170 QNLLL--DPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWS 227
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNIL----------------TSTELRFP---PGAIE 113
            G ++ +L+ G+P F G + +     I+                   E +FP   P    
Sbjct: 228 TGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFS 287
Query: 114 ELH-----PDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
           ++      PD +DL   LL   P  R+T  E   H F  ELR
Sbjct: 288 KVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR 329

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    T   KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 134 NILVSD---TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 190
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+     L R   ++ P
Sbjct: 191 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLCWKERP 246
Query: 132 VERITF 137
            +R TF
Sbjct: 247 EDRPTF 252

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    T   KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 135 NILVSD---TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 191
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+     L R   ++ P
Sbjct: 192 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLCWKERP 247
Query: 132 VERITF 137
            +R TF
Sbjct: 248 EDRPTF 253

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    T   KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 139 NILVSD---TLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+     L R   ++ P
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLCWKERP 251
Query: 132 VERITF 137
            +R TF
Sbjct: 252 EDRPTF 257

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 21/140 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 139 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 195
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S+E              C  L R  L  
Sbjct: 196 LGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSE--------------CQHLIRWCLAL 241
Query: 130 NPVERITFKEFFNHRFLGEL 149
            P +R TF+E  NH ++ ++
Sbjct: 242 RPSDRPTFEEIQNHPWMQDV 261

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 29/161 (18%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQ-NHKYDAKADLW 71
           QNLL++       LKI DFG AR+   P         +  Y AP+++  + KY    D+W
Sbjct: 129 QNLLINRE---GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 72  SVGAILFQLVTGKPPFDG---SNQLQLFQNILTS---------TEL-RFPPG-------- 110
           SVG I  ++V G P F G   ++QL     IL +         TEL ++ P         
Sbjct: 186 SVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLP 245
Query: 111 ---AIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE 148
               ++ L    +DL   +L+ +P +RIT K+   H +  E
Sbjct: 246 WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    T   KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 139 NILVSD---TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+     L R   ++ P
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLCWKERP 251
Query: 132 VERITF 137
            +R TF
Sbjct: 252 EDRPTF 257

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 14/145 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +   P  +       PL +MAPE I +  Y  ++
Sbjct: 212 AARNILLSEKNV---VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 268
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           D+WS G +L+++ + G  P+ G    + F + +   T +R P     E++   +D     
Sbjct: 269 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLD----C 324
Query: 127 LRQNPVERITFKEFFNHRFLGELRQ 151
               P +R TF E   H  LG L Q
Sbjct: 325 WHGEPSQRPTFSELVEH--LGNLLQ 347

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 27  LKIGDFGFAR------SLTPQDLADTLCGSPLYMAPEII-QNHKYDAKADLWSVGAILFQ 79
           ++I DFG +        +T   +  T  G+P +MAPE++ Q   YD KAD+WS G    +
Sbjct: 160 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 219
Query: 80  LVTGKPPFDGSNQLQLFQNILTSTELRFPPGA-----IEELHPDCVDLCRCLLRQNPVER 134
           L TG  P+     +++    L +       G      +++       +    L+++P +R
Sbjct: 220 LATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR 279
Query: 135 ITFKEFFNHRFL 146
            T  E   H+F 
Sbjct: 280 PTAAELLRHKFF 291

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    T   KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 139 NILVSD---TLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+     L R   ++ P
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLCWKERP 251
Query: 132 VERITF 137
            +R TF
Sbjct: 252 EDRPTF 257

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    T   KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 139 NILVSD---TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+     L R   ++ P
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLCWKERP 251
Query: 132 VERITF 137
            +R TF
Sbjct: 252 EDRPTF 257

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    T   KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 147 NILVSD---TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 203
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+     L R   ++ P
Sbjct: 204 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLCWKERP 259
Query: 132 VERITF 137
            +R TF
Sbjct: 260 EDRPTF 265

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    T   KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 140 NILVSD---TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 196
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+     L R   ++ P
Sbjct: 197 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLCWKERP 252
Query: 132 VERITF 137
            +R TF
Sbjct: 253 EDRPTF 258

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 27  LKIGDFGFAR------SLTPQDLADTLCGSPLYMAPEII-QNHKYDAKADLWSVGAILFQ 79
           ++I DFG +        +T   +  T  G+P +MAPE++ Q   YD KAD+WS G    +
Sbjct: 155 VQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIE 214
Query: 80  LVTGKPPFDGSNQLQLFQNILTSTELRFPPGA-----IEELHPDCVDLCRCLLRQNPVER 134
           L TG  P+     +++    L +       G      +++       +    L+++P +R
Sbjct: 215 LATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR 274
Query: 135 ITFKEFFNHRFL 146
            T  E   H+F 
Sbjct: 275 PTAAELLRHKFF 286

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    T   KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 141 NILVSD---TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 197
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+     L R   ++ P
Sbjct: 198 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLCWKERP 253
Query: 132 VERITF 137
            +R TF
Sbjct: 254 EDRPTF 259

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 29/161 (18%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQ-NHKYDAKADLW 71
           QNLL++       LKI DFG AR+   P         +  Y AP+++  + KY    D+W
Sbjct: 129 QNLLINRE---GELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIW 185
Query: 72  SVGAILFQLVTGKPPFDG---SNQLQLFQNILTS---------TEL-RFPPG-------- 110
           SVG I  ++V G P F G   ++QL     IL +         TEL ++ P         
Sbjct: 186 SVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLP 245
Query: 111 ---AIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE 148
               ++ L    +DL   +L+ +P +RIT K+   H +  E
Sbjct: 246 WESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    T   KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 148 NILVSD---TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 204
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+     L R   ++ P
Sbjct: 205 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLCWKERP 260
Query: 132 VERITF 137
            +R TF
Sbjct: 261 EDRPTF 266

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QN+LV++   +  +K+ DFG AR  + Q    ++  +  Y APE++    Y    DLWSV
Sbjct: 149 QNILVTS---SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSV 205
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCR 124
           G I  ++   KP F GS+ +     IL    L   PG  EE  P  V L R
Sbjct: 206 GCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL---PG--EEDWPRDVALPR 251

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    T   KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 145 NILVSD---TLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 201
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+     L R   ++ P
Sbjct: 202 FGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLCWKERP 257
Query: 132 VERITF 137
            +R TF
Sbjct: 258 EDRPTF 263

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 12/128 (9%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LV  N    V K+ DFG  R +   +  A      P+ + APE     ++  K+D+WS
Sbjct: 311 NILVGEN---LVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWS 367
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQN 130
            G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  R++
Sbjct: 368 FGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-WRKD 422
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 423 PEERPTFE 430

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QN+LV++   +  +K+ DFG AR  + Q    ++  +  Y APE++    Y    DLWSV
Sbjct: 149 QNILVTS---SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSV 205
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCR 124
           G I  ++   KP F GS+ +     IL    L   PG  EE  P  V L R
Sbjct: 206 GCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL---PG--EEDWPRDVALPR 251

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 154 NLLLNT---TXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 211 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QN+LV++   +  +K+ DFG AR  + Q    ++  +  Y APE++    Y    DLWSV
Sbjct: 149 QNILVTS---SGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSV 205
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCR 124
           G I  ++   KP F GS+ +     IL    L   PG  EE  P  V L R
Sbjct: 206 GCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL---PG--EEDWPRDVALPR 251

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWS 72
           +N+L+  N     LK+ DFG + +L    +     G+ +Y  PE I+ H+Y  + A +WS
Sbjct: 139 ENILIDLNRGE--LKLIDFG-SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWS 195
Query: 73  VGAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +G +L+ +V G  PF+   ++   Q+F     S E              C  L R  L  
Sbjct: 196 LGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXE--------------CQHLIRWCLAL 241
Query: 130 NPVERITFKEFFNHRFLGEL 149
            P +R TF+E  NH ++ ++
Sbjct: 242 RPSDRPTFEEIQNHPWMQDV 261

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 154 NLLLNT---TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 211 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 154 NLLLNT---TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 211 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 158 NLLLNT---TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 215 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 156 NLLLNT---TSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 213 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 158 NLLLNT---TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 215 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 174 NLLLNT---TXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 230
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 231 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 154 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 211 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 158 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 215 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245

>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 11/135 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N    ++KIGDFG +R +   D       + L   +M PE I   K+  ++
Sbjct: 160 ATRNCLVGAN---LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 216
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G IL+++ T GK P+   +  ++ + I     L  P    +E++    D+     
Sbjct: 217 DVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERPRVCPKEVY----DVMLGCW 272
Query: 128 RQNPVERITFKEFFN 142
           ++ P +R+  KE + 
Sbjct: 273 QREPQQRLNIKEIYK 287

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 158 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 215 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 159 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 215
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 216 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 160 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 216
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 217 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 247

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 151 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 207
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 208 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 238

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 158 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 214
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 215 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 156 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 213 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 152 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 208
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 209 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 152 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 208
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 209 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 239

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 156 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 212
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 213 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 243

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 162 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 218
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 219 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 249

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 154 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 210
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 211 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 241

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLVT- 82
           +KIGDFG  R +   D         L   +MAPE +++  +   +D+WS G +L+++ + 
Sbjct: 166 VKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 225
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
            + P+ G +  Q+ + ++    L  P    E +     DL R   + NP  R TF E  N
Sbjct: 226 AEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV----TDLMRMCWQFNPKMRPTFLEIVN 281

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 174 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSID 230
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 231 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 261

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 20/167 (11%)
Query: 27  LKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHK----YDAKADLWSVGAILFQL 80
           LK+ DFG    +    +   DT  G+P Y++PE++++      Y  + D WSVG  LF++
Sbjct: 213 LKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 272
Query: 81  VTGKPPFDGSNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCL------LRQNPVE 133
           + G  PF   + +  +  I+     L FP  A    H   + +C  L      L +N VE
Sbjct: 273 LVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNL-ICAFLTDREVRLGRNGVE 331
Query: 134 RITFKEFF-NHRF-LGELRQTVHAEQHSVVPETKPMVELLNSSTPED 178
            I    FF N ++    +R+T       VVPE    ++  N    ED
Sbjct: 332 EIKQHPFFKNDQWNWDNIRETA----APVVPELSSDIDSSNFDDIED 374

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 158 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSID 214
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 215 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 245

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           NLL++T   T  LKI DFG AR   P             +  Y APEI+ N K Y    D
Sbjct: 159 NLLLNT---TCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSID 215
Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +WSVG IL ++++ +P F G + L    +IL
Sbjct: 216 IWSVGCILAEMLSNRPIFPGKHYLDQLNHIL 246

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 19/122 (15%)
Query: 26  VLKIGDFGFARSLTPQDLADTL-------------CGSPLYMAPEIIQNHKYDAKADLWS 72
           V+K+GDFG   ++   +   T+              G+ LYM+PE I  + Y  K D++S
Sbjct: 156 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFS 215
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           +G ILF+L+    PF  S Q++  + +     L+FPP    + +P    + + +L  +P+
Sbjct: 216 LGLILFELLY---PF--STQMERVRTLTDVRNLKFPP-LFTQKYPCEYVMVQDMLSPSPM 269
Query: 133 ER 134
           ER
Sbjct: 270 ER 271

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLVT- 82
           +KIGDFG  R +   D         L   +MAPE +++  +   +D+WS G +L+++ + 
Sbjct: 169 VKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 228
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
            + P+ G +  Q+ + ++    L  P    E +     DL R   + NP  R TF E  N
Sbjct: 229 AEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV----TDLMRMCWQFNPKMRPTFLEIVN 284

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 55/124 (44%), Gaps = 6/124 (4%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ---NHK-YDAKADLWSVGAILFQLVT 82
           +K+ DFG +  L      D   G   YMAPE I    N K Y  K+D+WS+G  + +L  
Sbjct: 149 VKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAI 208
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
            + P+D       FQ +    E   P    ++   + VD     L++N  ER T+ E   
Sbjct: 209 LRFPYDSWG--TPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
Query: 143 HRFL 146
           H F 
Sbjct: 267 HPFF 270

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 30/168 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEII-QNHKYDAKADLW 71
           QNLL++       LK+ DFG AR+ + P    D    +  Y  P+I+  +  Y  + D+W
Sbjct: 129 QNLLINER---GELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMW 185
Query: 72  SVGAILFQLVTGKPPFDGSN---QLQLFQNILTSTELRFPPGAIE--------------- 113
            VG I +++ TG+P F GS    QL     IL +      PG +                
Sbjct: 186 GVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAE 245
Query: 114 -------ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVH 154
                   L  D  DL   LL+     RI+ ++   H F   L + +H
Sbjct: 246 ALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIH 293

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLVT- 82
           +KIGDFG  R +   D         L   +MAPE +++  +   +D+WS G +L+++ + 
Sbjct: 169 VKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 228
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
            + P+ G +  Q+ + ++    L  P    E +     DL R   + NP  R TF E  N
Sbjct: 229 AEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV----TDLMRMCWQFNPNMRPTFLEIVN 284

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTP-----QDLADTLCGSPLYMAPEIIQN-HKYDAKA 68
           NLLV+ N     LKIGDFG AR L       Q        +  Y APE++ + H+Y    
Sbjct: 188 NLLVNEN---CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAI 244
Query: 69  DLWSVGAILFQLVTGKPPFDGSN---QLQLFQNILTS 102
           DLWSVG I  +++  +  F G N   QLQL   +L +
Sbjct: 245 DLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGT 281

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 30/163 (18%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQ-NHKYDAKADLW 71
           QNLL++++     LK+ DFG AR+   P         +  Y AP+++  + KY    D+W
Sbjct: 148 QNLLINSDGA---LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIW 204
Query: 72  SVGAILFQLVTGKPPFDG---SNQLQLFQNILTSTELRFPPGAIE------------ELH 116
           S+G I  +++TGKP F G    +QL    +IL +   R  P   E            E  
Sbjct: 205 SIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKK 264
Query: 117 P----------DCVDLCRCLLRQNPVERITFKEFFNHRFLGEL 149
           P          + +DL   +L  +P +RI+ ++  NH +  +L
Sbjct: 265 PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 30/163 (18%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQ-NHKYDAKADLW 71
           QNLL++++     LK+ DFG AR+   P         +  Y AP+++  + KY    D+W
Sbjct: 148 QNLLINSDGA---LKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIW 204
Query: 72  SVGAILFQLVTGKPPFDG---SNQLQLFQNILTSTELRFPPGAIE------------ELH 116
           S+G I  +++TGKP F G    +QL    +IL +   R  P   E            E  
Sbjct: 205 SIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKK 264
Query: 117 P----------DCVDLCRCLLRQNPVERITFKEFFNHRFLGEL 149
           P          + +DL   +L  +P +RI+ ++  NH +  +L
Sbjct: 265 PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 50/193 (25%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADT------------LCGSPLYMAPEI-IQN 61
           NLL+++N     LK+ DFG AR +  +  AD                +  Y APE+ + +
Sbjct: 142 NLLINSN---CDLKVCDFGLAR-IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTS 197
Query: 62  HKYDAKADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNIL----TSTELR-------- 106
            KY    D+WS G IL +L   +P F G +   QL L   I+    +  +LR        
Sbjct: 198 AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAR 257
Query: 107 --------FPPGAIEEL----HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVH 154
                   +P   +E++    +P  +DL + +L  +P +RIT KE   H +L    QT H
Sbjct: 258 EYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL----QTYH 313
Query: 155 AEQHSVVPETKPM 167
                  PE +P+
Sbjct: 314 DPNDE--PEGEPI 324

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 14/141 (9%)
Query: 27  LKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHK----YDAKADLWSVGAILFQL 80
           LK+ DFG    +  + +   DT  G+P Y++PE++++      Y  + D WSVG  L+++
Sbjct: 212 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
Query: 81  VTGKPPFDGSNQLQLFQNILT-STELRFPPG---AIEELHPDCVDLCRCLLR--QNPVER 134
           + G  PF   + +  +  I+     L FP     + E  +  C  L    +R  +N VE 
Sbjct: 272 LVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEE 331
Query: 135 ITFKEFF-NHRFLGE-LRQTV 153
           I    FF N ++  E LR TV
Sbjct: 332 IKRHLFFKNDQWAWETLRDTV 352

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 18/136 (13%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLC------GSPLYMAPEIIQNHKYDAKA 68
           N+L+S++     L   DFG A  L P  L  +L       G+  +MAPE++     DAK 
Sbjct: 215 NVLLSSDGSHAALC--DFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKV 272
Query: 69  DLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLC----R 124
           D+WS   ++  ++ G  P+      Q F+  L       PP  + E+ P C  L     +
Sbjct: 273 DVWSSCCMMLHMLNGCHPWT-----QFFRGPLCLKIASEPP-PVREIPPSCAPLTAQAIQ 326
Query: 125 CLLRQNPVERITFKEF 140
             LR+ P+ R++  E 
Sbjct: 327 EGLRKEPIHRVSAAEL 342

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 14/141 (9%)
Query: 27  LKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHK----YDAKADLWSVGAILFQL 80
           LK+ DFG    +  + +   DT  G+P Y++PE++++      Y  + D WSVG  L+++
Sbjct: 207 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 266
Query: 81  VTGKPPFDGSNQLQLFQNILT-STELRFPPG---AIEELHPDCVDLCRCLLR--QNPVER 134
           + G  PF   + +  +  I+     L FP     + E  +  C  L    +R  +N VE 
Sbjct: 267 LVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEE 326
Query: 135 ITFKEFF-NHRFLGE-LRQTV 153
           I    FF N ++  E LR TV
Sbjct: 327 IKRHLFFKNDQWAWETLRDTV 347

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 14/141 (9%)
Query: 27  LKIGDFGFARSLTPQDLA--DTLCGSPLYMAPEIIQNHK----YDAKADLWSVGAILFQL 80
           LK+ DFG    +  + +   DT  G+P Y++PE++++      Y  + D WSVG  L+++
Sbjct: 212 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 271
Query: 81  VTGKPPFDGSNQLQLFQNILT-STELRFPPG---AIEELHPDCVDLCRCLLR--QNPVER 134
           + G  PF   + +  +  I+     L FP     + E  +  C  L    +R  +N VE 
Sbjct: 272 LVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEE 331
Query: 135 ITFKEFF-NHRFLGE-LRQTV 153
           I    FF N ++  E LR TV
Sbjct: 332 IKRHLFFKNDQWAWETLRDTV 352

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +V+ +     +KIGDFG  R +   D         L   +MAPE +++  +   +
Sbjct: 156 AARNCMVAHDFT---VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSS 212
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ +  + P+ G +  Q+ + ++    L  P    E +     DL R   
Sbjct: 213 DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV----TDLMRMCW 268
Query: 128 RQNPVERITFKEFFN 142
           + NP  R TF E  N
Sbjct: 269 QFNPKMRPTFLEIVN 283

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 27  LKIGDFGFARSLTPQDLADTLCG---SPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVT 82
           LKI DFG AR       AD + G   +  Y APEI+ N   Y+   D+WSVG I+ +L+T
Sbjct: 171 LKILDFGLARHT-----ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGA 111
           G+  F G++ +   + IL    L   PGA
Sbjct: 226 GRTLFPGTDHIDQLKLIL---RLVGTPGA 251

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YD-AKADLWSVGAILFQLVTGK 84
           +K+ DFG +  +  + +  +  G+  +M PE   N   Y+ AK D+WS+G  L+ +    
Sbjct: 191 VKLSDFGESEYMVDKKIKGSR-GTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249
Query: 85  PPFDGSNQL-QLFQNILTSTELRFPPGAIEELHP---------------DCVDLCRCLLR 128
            PF     L +LF NI T   + +P      L+P               + +D  +  LR
Sbjct: 250 VPFSLKISLVELFNNIRTKN-IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLR 308
Query: 129 QNPVERITFKEFFNHRFLGE 148
           +NP ERIT ++   H +L +
Sbjct: 309 KNPAERITSEDALKHEWLAD 328

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 11/135 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +V+ +     +KIGDFG  R +   D         L   +MAPE +++  +   +
Sbjct: 157 AARNCMVAHDFT---VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSS 213
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ +  + P+ G +  Q+ + ++    L  P    E +     DL R   
Sbjct: 214 DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV----TDLMRMCW 269
Query: 128 RQNPVERITFKEFFN 142
           + NP  R TF E  N
Sbjct: 270 QFNPKMRPTFLEIVN 284

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 27  LKIGDFGFARSLTPQDLADTLCG---SPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVT 82
           LKI DFG AR       AD + G   +  Y APEI+ N   Y+   D+WSVG I+ +L+T
Sbjct: 171 LKILDFGLARHT-----ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGA 111
           G+  F G++ +   + IL    L   PGA
Sbjct: 226 GRTLFPGTDHIDQLKLIL---RLVGTPGA 251

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 18/136 (13%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLA------DTLCGSPLYMAPEIIQNHKYDAKA 68
           N+L+S++     L   DFG A  L P  L       D + G+  +MAPE++     DAK 
Sbjct: 196 NVLLSSDGSHAALC--DFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKV 253
Query: 69  DLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLC----R 124
           D+WS   ++  ++ G  P+      Q F+  L       PP  + E+ P C  L     +
Sbjct: 254 DVWSSCCMMLHMLNGCHPWT-----QFFRGPLCLKIASEPP-PVREIPPSCAPLTAQAIQ 307
Query: 125 CLLRQNPVERITFKEF 140
             LR+ P+ R++  E 
Sbjct: 308 EGLRKEPIHRVSAAEL 323

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 12/89 (13%)
Query: 27  LKIGDFGFARSLTPQDLADTLCG---SPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVT 82
           LKI DFG AR       AD + G   +  Y APEI+ N   Y+   D+WSVG I+ +L+T
Sbjct: 171 LKILDFGLARHT-----ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLT 225
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGA 111
           G+  F G++ +   + IL    L   PGA
Sbjct: 226 GRTLFPGTDHIDQLKLIL---RLVGTPGA 251

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 14  QNLLVSTNEV--TPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHK-YDAKAD 69
           QNLL+S ++   TPVLKIGDFG AR+   P         +  Y  PEI+   + Y    D
Sbjct: 161 QNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVD 220
Query: 70  LWSVGAILFQLVTGKPPFDGSNQL-QLFQ 97
           +WS+  I  +++   P F G +++ QLF+
Sbjct: 221 IWSIACIWAEMLMKTPLFPGDSEIDQLFK 249

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 12/97 (12%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTP-----QDLADTLCGSPLYMAPEIIQN-HKYDAKA 68
           NLLV+ N     LKIGDFG AR L       Q        +  Y APE++ + H+Y    
Sbjct: 189 NLLVNEN---CELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAI 245
Query: 69  DLWSVGAILFQLVTGKPPFDGSN---QLQLFQNILTS 102
           DLWSVG I  +++  +  F G N   QLQL   +L +
Sbjct: 246 DLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGT 282

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLVT- 82
           +KIGDFG  R +   D         L   +MAPE +++  +   +D+WS G +L+++ + 
Sbjct: 170 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 229
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
            + P+ G +  Q+ + ++    L  P    E +     DL R   + NP  R TF E  N
Sbjct: 230 AEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV----TDLMRMCWQFNPNMRPTFLEIVN 285

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 8/120 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLVT- 82
           +KIGDFG  R +   D         L   +MAPE +++  +   +D+WS G +L+++ + 
Sbjct: 169 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSL 228
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
            + P+ G +  Q+ + ++    L  P    E +     DL R   + NP  R TF E  N
Sbjct: 229 AEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV----TDLMRMCWQFNPNMRPTFLEIVN 284

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    + V KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 314 NILVSA---SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 370
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G +  ++ + +     +  P    EEL+     + RC  +  P
Sbjct: 371 FGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYN---IMMRC-WKNRP 426
Query: 132 VERITFK 138
            ER TF+
Sbjct: 427 EERPTFE 433

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 50/193 (25%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADT------------LCGSPLYMAPEI-IQN 61
           NLL+++N     LK+ DFG AR +  +  AD                +  Y APE+ + +
Sbjct: 142 NLLINSN---CDLKVCDFGLAR-IIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTS 197
Query: 62  HKYDAKADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNIL----TSTELR-------- 106
            KY    D+WS G IL +L   +P F G +   QL L   I+    +  +LR        
Sbjct: 198 AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAR 257
Query: 107 --------FPPGAIEEL----HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVH 154
                   +P   +E++    +P  +DL + +L  +P +RIT KE   H +L    QT H
Sbjct: 258 EYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL----QTYH 313
Query: 155 AEQHSVVPETKPM 167
                  PE +P+
Sbjct: 314 DPNDE--PEGEPI 324

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 85/193 (44%), Gaps = 50/193 (25%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADT------------LCGSPLYMAPEI-IQN 61
           NLL+++N     LK+ DFG AR +  +  AD                +  Y APE+ + +
Sbjct: 142 NLLINSN---CDLKVCDFGLAR-IIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTS 197
Query: 62  HKYDAKADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNIL----TSTELR-------- 106
            KY    D+WS G IL +L   +P F G +   QL L   I+    +  +LR        
Sbjct: 198 AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAR 257
Query: 107 --------FPPGAIEEL----HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVH 154
                   +P   +E++    +P  +DL + +L  +P +RIT KE   H +L    QT H
Sbjct: 258 EYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYL----QTYH 313
Query: 155 AEQHSVVPETKPM 167
                  PE +P+
Sbjct: 314 DPNDE--PEGEPI 324

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 52.4 bits (124), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR  T  ++A     +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFGLARH-TDDEMA-GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR  T  ++A     +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFGLARH-TDDEMA-GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR  T  ++A     +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 160 LKILDFGLARH-TDDEMA-GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 218 LFPGTDHIDQLKLIL---RLVGTPGA 240

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 10/127 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    + V KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 141 NILVSA---SLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 197
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L ++VT G+ P+ G +  ++ + +     +  P    EEL+     + RC  +  P
Sbjct: 198 FGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYN---IMMRC-WKNRP 253
Query: 132 VERITFK 138
            ER TF+
Sbjct: 254 EERPTFE 260

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 29  IGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLVT-GK 84
           + DFG +R +   D     C S L   ++A E + ++ Y   +D+W+ G  +++++T G+
Sbjct: 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQ 237
Query: 85  PPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF 137
            P+ G    +++  ++    L+ PP  +EE++    DL       +P +R +F
Sbjct: 238 TPYAGIENAEIYNYLIGGNRLKQPPECMEEVY----DLMYQCWSADPKQRPSF 286

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 13/117 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+LV++N V    K+ DFG +R +   P+ +  T  G  P+ + APE IQ  K+ + 
Sbjct: 172 AARNILVNSNLVC---KVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSA 228
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           +D+WS G +++++++   +P +D SNQ  + + I     L  P   P  + +L  DC
Sbjct: 229 SDVWSYGIVMWEVMSYGERPYWDMSNQ-DVIKAIEEGYRLPAPMDCPAGLHQLMLDC 284

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 52.0 bits (123), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 170 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 228 LFPGTDHIDQLKLIL---RLVGTPGA 250

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 170 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 228 LFPGTDHIDQLKLIL---RLVGTPGA 250

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 25/126 (19%)
Query: 10  ANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-------YMAPEIIQNH 62
           A A +N+LV++N V    K+ DFG +R L   D +D    S L       + APE IQ  
Sbjct: 134 ALAARNILVNSNLVC---KVSDFGLSRFLE-DDTSDPTYTSALGGKIPIRWTAPEAIQYR 189
Query: 63  KYDAKADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIE 113
           K+ + +D+WS G +++++++   +P +D +N     Q+++ + E   R P     P A+ 
Sbjct: 190 KFTSASDVWSYGIVMWEVMSYGERPYWDMTN-----QDVINAIEQDYRLPPPMDCPSALH 244
Query: 114 ELHPDC 119
           +L  DC
Sbjct: 245 QLMLDC 250

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 170 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 228 LFPGTDHIDQLKLIL---RLVGTPGA 250

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 170 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 228 LFPGTDHIDQLKLIL---RLVGTPGA 250

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 169 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 227 LFPGTDHIDQLKLIL---RLVGTPGA 249

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 176 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 234 LFPGTDHIDQLKLIL---RLVGTPGA 256

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 166 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 224 LFPGTDHIDQLKLIL---RLVGTPGA 246

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 176 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 234 LFPGTDHIDQLKLIL---RLVGTPGA 256

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 134 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 191 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 247
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 248 ENPSARITIPDIKKDRW 264

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 176 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 234 LFPGTDHIDQLKLIL---RLVGTPGA 256

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 166 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 224 LFPGTDHIDQLKLIL---RLVGTPGA 246

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 169 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 227 LFPGTDHIDQLKLIL---RLVGTPGA 249

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 187 LKILDFGLARH--TDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 245 LFPGTDHIDQLKLIL---RLVGTPGA 267

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 163 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 220
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 221 LFPGTDHIDQLKLIL---RLVGTPGA 243

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 171 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 229 LFPGTDHIDQLKLIL---RLVGTPGA 251

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 132 QNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIW 188
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 139 QNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIW 195
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 196 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 255
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 256 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 301

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 166 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 224 LFPGTDHIDQLKLIL---RLVGTPGA 246

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 169 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 227 LFPGTDHIDQLKLIL---RLVGTPGA 249

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 187 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 245 LFPGTDHIDQLKLIL---RLVGTPGA 267

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 169 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 227 LFPGTDHIDQLKLIL---RLVGTPGA 249

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+L+  N     +KI DFG +  L  Q +   +  S  Y +PE++    YD   D+WS+
Sbjct: 169 ENILLC-NPKRSAIKIVDFGSSCQLG-QRIYQXI-QSRFYRSPEVLLGMPYDLAIDMWSL 225
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL ++ TG+P F G+N++     I+    L  PP  I              L Q P  
Sbjct: 226 GCILVEMHTGEPLFSGANEVDQMNKIVEV--LGIPPAHI--------------LDQAPKA 269
Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSST--PEDRHSLHSEH 186
           R  F++  +  +   L++T   ++    P T+ +  +L   T  P  R +  S H
Sbjct: 270 RKFFEKLPDGTW--NLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGH 322

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 133 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 190 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 246
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 247 ENPSARITIPDIKKDRW 263

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 175 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 233 LFPGTDHIDQLKLIL---RLVGTPGA 255

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 161 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 219 LFPGTDHIDQLKLIL---RLVGTPGA 241

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 184 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 242 LFPGTDHIDQLKLIL---RLVGTPGA 264

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 160 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 218 LFPGTDHIDQLKLIL---RLVGTPGA 240

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 166 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 224 LFPGTDHIDQLKLIL---RLVGTPGA 246

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 183 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 241 LFPGTDHIDQLKLIL---RLVGTPGA 263

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 183 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 241 LFPGTDHIDQLKLIL---RLVGTPGA 263

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 175 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 233 LFPGTDHIDQLKLIL---RLVGTPGA 255

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 174 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 231
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 232 LFPGTDHIDQLKLIL---RLVGTPGA 254

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 184 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 242 LFPGTDHIDQLKLIL---RLVGTPGA 264

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 160 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 218 LFPGTDHIDQLKLIL---RLVGTPGA 240

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+LV+       +KI DFG +R +  +D  +  +    P+ +MA E + +H Y  ++
Sbjct: 177 AARNILVAEGRK---MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++VT G  P+ G    +LF  + T   +  P    EE++     L     
Sbjct: 234 DVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMY----RLMLQCW 289
Query: 128 RQNPVERITFKEF 140
           +Q P +R  F + 
Sbjct: 290 KQEPDKRPVFADI 302

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFGLARH--TDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 160 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 218 LFPGTDHIDQLKLIL---RLVGTPGA 240

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 161 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 219 LFPGTDHIDQLKLIL---RLVGTPGA 241

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 184 LKILDFGLARH--TDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 242 LFPGTDHIDQLKLIL---RLVGTPGA 264

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 33/86 (38%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 162 LKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 219
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 220 LFPGTDHIDQLKLIL---RLVGTPGA 242

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+LV+       +KI DFG +R +  +D  +  +    P+ +MA E + +H Y  ++
Sbjct: 177 AARNILVAEGRK---MKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++VT G  P+ G    +LF  + T   +  P    EE++     L     
Sbjct: 234 DVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMY----RLMLQCW 289
Query: 128 RQNPVERITFKEF 140
           +Q P +R  F + 
Sbjct: 290 KQEPDKRPVFADI 302

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+LV+       +KI DFG +R +  +D  +  +    P+ +MA E + +H Y  ++
Sbjct: 177 AARNILVAEGRK---MKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQS 233
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++VT G  P+ G    +LF  + T   +  P    EE++     L     
Sbjct: 234 DVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCSEEMY----RLMLQCW 289
Query: 128 RQNPVERITFKEF 140
           +Q P +R  F + 
Sbjct: 290 KQEPDKRPVFADI 302

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+L+  N     +KI DFG +  L  Q +   +  S  Y +PE++    YD   D+WS+
Sbjct: 188 ENILL-CNPKRSAIKIVDFGSSCQLG-QRIYQXI-QSRFYRSPEVLLGMPYDLAIDMWSL 244
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL ++ TG+P F G+N++     I+    L  PP  I              L Q P  
Sbjct: 245 GCILVEMHTGEPLFSGANEVDQMNKIVEV--LGIPPAHI--------------LDQAPKA 288
Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSST--PEDRHSLHSEH 186
           R  F++  +  +   L++T   ++    P T+ +  +L   T  P  R +  S H
Sbjct: 289 RKFFEKLPDGTW--NLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGH 341

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 79/175 (45%), Gaps = 23/175 (13%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+L+  N     +KI DFG +  L  Q +   +  S  Y +PE++    YD   D+WS+
Sbjct: 188 ENILLC-NPKRXAIKIVDFGSSCQLG-QRIYQXI-QSRFYRSPEVLLGMPYDLAIDMWSL 244
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL ++ TG+P F G+N++     I+    L  PP  I              L Q P  
Sbjct: 245 GCILVEMHTGEPLFSGANEVDQMNKIVEV--LGIPPAHI--------------LDQAPKA 288
Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSST--PEDRHSLHSEH 186
           R  F++  +  +   L++T   ++    P T+ +  +L   T  P  R +  S H
Sbjct: 289 RKFFEKLPDGTW--NLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGH 341

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 134 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 191 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 247
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 248 ENPSARITIPDIKKDRW 264

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 134 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 191 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 247
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 248 ENPSARITIPDIKKDRW 264

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 134 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 191 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 247
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 248 ENPSARITIPDIKKDRW 264

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 25/124 (20%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-------YMAPEIIQNHKY 64
           A +N+LV++N V    K+ DFG +R L   D +D    S L       + APE IQ  K+
Sbjct: 162 AARNILVNSNLVC---KVSDFGLSRFLE-DDTSDPTYTSALGGKIPIRWTAPEAIQYRKF 217
Query: 65  DAKADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEEL 115
            + +D+WS G +++++++   +P +D +N     Q+++ + E   R P     P A+ +L
Sbjct: 218 TSASDVWSYGIVMWEVMSYGERPYWDMTN-----QDVINAIEQDYRLPPPMDCPSALHQL 272
Query: 116 HPDC 119
             DC
Sbjct: 273 MLDC 276

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 20/155 (12%)
Query: 26  VLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           VLKI DFG A  +      +   GS  +MAPE+ +   Y  K D++S G IL++++T + 
Sbjct: 145 VLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 202
Query: 86  PFD--GSNQLQLFQNILTSTE---LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF 140
           PFD  G    ++   +   T    ++  P  IE L      + RC   ++P +R + +E 
Sbjct: 203 PFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESL------MTRC-WSKDPSQRPSMEEI 255
Query: 141 FN------HRFLGELRQTVHAEQHSVVPETKPMVE 169
                     F G      +  QHS+ P     VE
Sbjct: 256 VKIMTHLMRYFPGADEPLQYPCQHSLPPGEDGRVE 290

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 133 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 190 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 246
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 247 ENPSARITIPDIKKDRW 263

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 133 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 190 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 246
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 247 ENPSARITIPDIKKDRW 263

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 135 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 251
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 252 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 133 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 190 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 246
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 247 ENPSARITIPDIKKDRW 263

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 131 QNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 247
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 134 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 191 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 250
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 251 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 134 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 191 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 250
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 251 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 132 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 135 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 251
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 252 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 132 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 134 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 191 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 247
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 248 ENPSARITIPDIKKDRW 264

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 132 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 188
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 189 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 245
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 246 ENPSARITIPDIKKDRW 262

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 133 QNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 190 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 249
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 250 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 1   MCYVFMIVSANACQNLLVSTNEVTP---VLKIGDFGFARSLTPQDLADTLCGSPLYMAPE 57
           +C +  + SA      L  +N V      LKI DFG AR+     +      +  Y APE
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 58  IIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +I    Y    D+WSVG I+ +++ G   F G++ +  +  ++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 134 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 191 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 247
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 248 ENPSARITIPDIKKDRW 264

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 133 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 190 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 246
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 247 ENPSARITIPDIKKDRW 263

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 69/155 (44%), Gaps = 20/155 (12%)
Query: 26  VLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           VLKI DFG A  +      +   GS  +MAPE+ +   Y  K D++S G IL++++T + 
Sbjct: 144 VLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRK 201
Query: 86  PFD--GSNQLQLFQNILTSTE---LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF 140
           PFD  G    ++   +   T    ++  P  IE L      + RC   ++P +R + +E 
Sbjct: 202 PFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESL------MTRC-WSKDPSQRPSMEEI 254
Query: 141 FN------HRFLGELRQTVHAEQHSVVPETKPMVE 169
                     F G      +  QHS+ P     VE
Sbjct: 255 VKIMTHLMRYFPGADEPLQYPCQHSLPPGEDGRVE 289

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 135 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 251
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 252 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 133 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 190 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 249
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 250 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 133 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 190 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 246
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 247 ENPSARITIPDIKKDRW 263

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 1   MCYVFMIVSANACQNLLVSTNEVTP---VLKIGDFGFARSLTPQDLADTLCGSPLYMAPE 57
           +C +  + SA      L  +N V      LKI DFG AR+     +      +  Y APE
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 58  IIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP-PGAIEELH 116
           +I    Y    D+WSVG I+ +++ G   F G++ +  +  ++   +L  P P  +++L 
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPSPEFMKKLQ 253
Query: 117 P 117
           P
Sbjct: 254 P 254

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 135 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 251
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 252 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 134 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 191 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 250
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 251 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 132 QNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 131 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 247
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 131 QNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 247
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTL-CGSPLYMAPEIIQ---NHK-YDAKADLWSVGAILFQLV 81
           +K+ DFG +  L    +A T+  G   YMAPE I    N K Y  K+D+WS+G  + +L 
Sbjct: 193 VKMCDFGISGYLV-DSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 251
Query: 82  TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF 141
             + P+D       FQ +    E   P    ++   + VD     L++N  ER T+ E  
Sbjct: 252 ILRFPYDSWG--TPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 309
Query: 142 NHRFL 146
            H F 
Sbjct: 310 QHPFF 314

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 139 QNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 195
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 196 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 255
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 256 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 301

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFAR-SLTPQDLADTLCGSPL-YMAPEIIQNHKYDAKAD 69
           A +N LV  N+V   +K+ DFG  R  L  Q  + T    P+ + +PE+    +Y +K+D
Sbjct: 131 AARNCLVGENQV---IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187
Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +++++ + GK P++  +  ++ ++I T   L  P  A   ++   ++ C    R
Sbjct: 188 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVY-QIMNHC---WR 243
Query: 129 QNPVERITFKEFFNHRFLGELRQT 152
           + P +R  F      R L E+ ++
Sbjct: 244 ERPEDRPAFSRLL--RQLAEIAES 265

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFAR-SLTPQDLADTLCGSPL-YMAPEIIQNHKYDAKAD 69
           A +N LV  N+V   +K+ DFG  R  L  Q  + T    P+ + +PE+    +Y +K+D
Sbjct: 130 AARNCLVGENQV---IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP 108
           +WS G +++++ + GK P++  +  ++ ++I T   L  P
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP 226

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 133 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 190 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 249
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 250 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 25/155 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+LV++      +K+ DFG AR  + Q   D +  +  Y APE++    Y    D+WSV
Sbjct: 141 ENILVTSGGT---VKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSV 197
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTEL---------------RFPP-------GA 111
           G I  ++   KP F G+++      I     L                FPP         
Sbjct: 198 GCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSV 257
Query: 112 IEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           + E+      L   +L  NP +RI+      H +L
Sbjct: 258 VPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 133 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 190 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 246
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 247 ENPSARITIPDIKKDRW 263

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 134 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 190
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 191 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 247
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 248 ENPSARITIPDIKKDRW 264

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 74/144 (51%), Gaps = 12/144 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFAR-SLTPQDLADTLCGSPL-YMAPEIIQNHKYDAKAD 69
           A +N LV  N+V   +K+ DFG  R  L  Q  + T    P+ + +PE+    +Y +K+D
Sbjct: 133 AARNCLVGENQV---IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 189
Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +++++ + GK P++  +  ++ ++I T   L  P  A   ++   ++ C    R
Sbjct: 190 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVY-QIMNHC---WR 245
Query: 129 QNPVERITFKEFFNHRFLGELRQT 152
           + P +R  F      R L E+ ++
Sbjct: 246 ERPEDRPAFSRLL--RQLAEIAES 267

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 135 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 251
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 252 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 132 QNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 136 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 192
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 193 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 252
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 253 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 298

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 132 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N++V ++     LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG
Sbjct: 156 NIVVKSD---ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 75  AILFQLVTGKPPFDGSNQLQLFQNIL 100
            I+ +++ G   F G++ +  +  ++
Sbjct: 213 VIMGEMIKGGVLFPGTDHIDQWNKVI 238

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 132 QNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 131 QNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 247
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 132 QNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + +CG+  Y+APE+++  ++ A+  D
Sbjct: 133 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVD 189
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 190 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 246
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 247 ENPSARITIPDIKKDRW 263

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 131 QNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 247
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 136 QNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 192
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 193 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 252
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 253 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 298

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFAR-SLTPQDLADTLCGSPL-YMAPEIIQNHKYDAKAD 69
           A +N LV  N+V   +K+ DFG  R  L  Q  + T    P+ + +PE+    +Y +K+D
Sbjct: 130 AARNCLVGENQV---IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 186
Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP 108
           +WS G +++++ + GK P++  +  ++ ++I T   L  P
Sbjct: 187 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP 226

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N++V ++     LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG
Sbjct: 156 NIVVKSD---ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 75  AILFQLVTGKPPFDGSNQLQLFQNIL 100
            I+ +++ G   F G++ +  +  ++
Sbjct: 213 VIMGEMIKGGVLFPGTDHIDQWNKVI 238

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 131 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 187
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 188 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 247
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 248 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFAR-SLTPQDLADTLCGSPL-YMAPEIIQNHKYDAKAD 69
           A +N LV  N+V   +K+ DFG  R  L  Q  + T    P+ + +PE+    +Y +K+D
Sbjct: 128 AARNCLVGENQV---IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 184
Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP 108
           +WS G +++++ + GK P++  +  ++ ++I T   L  P
Sbjct: 185 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP 224

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 1   MCYVFMIVSANACQNLLVSTNEVTP---VLKIGDFGFARSLTPQDLADTLCGSPLYMAPE 57
           +C +  + SA      L  +N V      LKI DFG AR+     +      +  Y APE
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 58  IIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP-PGAIEELH 116
           +I    Y    D+WSVG I+ +++ G   F G++ +  +  ++   +L  P P  +++L 
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPSPEFMKKLQ 253
Query: 117 P 117
           P
Sbjct: 254 P 254

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 6/100 (6%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFAR-SLTPQDLADTLCGSPL-YMAPEIIQNHKYDAKAD 69
           A +N LV  N+V   +K+ DFG  R  L  Q  + T    P+ + +PE+    +Y +K+D
Sbjct: 150 AARNCLVGENQV---IKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 206
Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP 108
           +WS G +++++ + GK P++  +  ++ ++I T   L  P
Sbjct: 207 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP 246

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 45/86 (52%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI D+G AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDYGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 1   MCYVFMIVSANACQNLLVSTNEVTP---VLKIGDFGFARSLTPQDLADTLCGSPLYMAPE 57
           +C +  + SA      L  +N V      LKI DFG AR+     +      +  Y APE
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 58  IIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP-PGAIEELH 116
           +I    Y    D+WSVG I+ +++ G   F G++ +  +  ++   +L  P P  +++L 
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPSPEFMKKLQ 253
Query: 117 P 117
           P
Sbjct: 254 P 254

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 1   MCYVFMIVSANACQNLLVSTNEVTP---VLKIGDFGFARSLTPQDLADTLCGSPLYMAPE 57
           +C +  + SA      L  +N V      LKI DFG AR+     +      +  Y APE
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 196
Query: 58  IIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP-PGAIEELH 116
           +I    Y    D+WSVG I+ +++ G   F G++ +  +  ++   +L  P P  +++L 
Sbjct: 197 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPCPEFMKKLQ 254
Query: 117 P 117
           P
Sbjct: 255 P 255

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N++V ++     LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG
Sbjct: 156 NIVVKSD---ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 75  AILFQLVTGKPPFDGSNQLQLFQNIL 100
            I+ +++ G   F G++ +  +  ++
Sbjct: 213 CIMGEMIKGGVLFPGTDHIDQWNKVI 238

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 1   MCYVFMIVSANACQNLLVSTNEVTP---VLKIGDFGFARSLTPQDLADTLCGSPLYMAPE 57
           +C +  + SA      L  +N V      LKI DFG AR+     +      +  Y APE
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPE 195
Query: 58  IIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP-PGAIEELH 116
           +I    Y    D+WSVG I+ +++ G   F G++ +  +  ++   +L  P P  +++L 
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPCPEFMKKLQ 253
Query: 117 P 117
           P
Sbjct: 254 P 254

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-PL-YMAPEIIQNHKYDAKAD 69
           A +N+LVS+N+    +K+GDFG +R +          G  P+ +MAPE I   ++ + +D
Sbjct: 138 AARNVLVSSNDC---VKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRFTSASD 194
Query: 70  LWSVGAILFQ-LVTGKPPFDGSNQLQLFQNILTSTELRFPPGA 111
           +W  G  +++ L+ G  PF G     +   I     L  PP  
Sbjct: 195 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 237

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+L+ T       KI DFG +++L   +    A T    P+ + APE I  +K+ +K
Sbjct: 497 AARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 553
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLC 123
           +D+WS G ++++  + G+ P+ G    ++   +     +  P G   E++ D ++LC
Sbjct: 554 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY-DLMNLC 609

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 27  LKIGDFGFARSLTPQDLADT--LCGSPLYMAPEIIQ-----NHKYDAKADLWSVGAILFQ 79
           +++ DFG    L       +    G+P Y++PEI+Q       +Y  + D WS+G  +++
Sbjct: 214 IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYE 273
Query: 80  LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL--RQNPVERITF 137
           ++ G+ PF   + ++ +  I+   E    P  + ++  +  DL R L+  R++ + +   
Sbjct: 274 MLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGI 333
Query: 138 KEFFNHRFL 146
           ++F  H F 
Sbjct: 334 EDFKKHPFF 342

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-PL-YMAPEIIQNHKYDAKAD 69
           A +N+LVS+N+    +K+GDFG +R +          G  P+ +MAPE I   ++ + +D
Sbjct: 141 AARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 197
Query: 70  LWSVGAILFQ-LVTGKPPFDGSNQLQLFQNILTSTELRFPP 109
           +W  G  +++ L+ G  PF G     +   I     L  PP
Sbjct: 198 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP 238

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           QNLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 132 QNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+L+ T       KI DFG +++L   +    A T    P+ + APE I  +K+ +K
Sbjct: 496 AARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 552
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLC 123
           +D+WS G ++++  + G+ P+ G    ++   +     +  P G   E++ D ++LC
Sbjct: 553 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY-DLMNLC 608

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 1   MCYVFMIVSANACQNLLVSTNEVTP---VLKIGDFGFARSLTPQDLADTLCGSPLYMAPE 57
           +C +  + SA      L  +N V      LKI DFG AR+     +      +  Y APE
Sbjct: 138 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPE 197
Query: 58  IIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP-PGAIEELH 116
           +I    Y    D+WSVG I+ +++ G   F G++ +  +  ++   +L  P P  +++L 
Sbjct: 198 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI--EQLGTPCPEFMKKLQ 255
Query: 117 P 117
           P
Sbjct: 256 P 256

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+L+ T       KI DFG +++L   +    A T    P+ + APE I  +K+ +K
Sbjct: 152 AARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 208
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLC 123
           +D+WS G ++++  + G+ P+ G    ++   +     +  P G   E++ D ++LC
Sbjct: 209 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY-DLMNLC 264

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-PL-YMAPEIIQNHKYDAKAD 69
           A +N+LVS+N+    +K+GDFG +R +          G  P+ +MAPE I   ++ + +D
Sbjct: 518 AARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 574
Query: 70  LWSVGAILFQ-LVTGKPPFDGSNQLQLFQNILTSTELRFPP 109
           +W  G  +++ L+ G  PF G     +   I     L  PP
Sbjct: 575 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP 615

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+L+ T       KI DFG +++L   +    A T    P+ + APE I  +K+ +K
Sbjct: 134 AARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 190
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLC 123
           +D+WS G ++++  + G+ P+ G    ++   +     +  P G   E++ D ++LC
Sbjct: 191 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY-DLMNLC 246

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+L+ T       KI DFG +++L   +    A T    P+ + APE I  +K+ +K
Sbjct: 154 AARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 210
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLC 123
           +D+WS G ++++  + G+ P+ G    ++   +     +  P G   E++ D ++LC
Sbjct: 211 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY-DLMNLC 266

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+L+ T       KI DFG +++L   +    A T    P+ + APE I  +K+ +K
Sbjct: 154 AARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 210
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLC 123
           +D+WS G ++++  + G+ P+ G    ++   +     +  P G   E++ D ++LC
Sbjct: 211 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY-DLMNLC 266

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+L+ T       KI DFG +++L   +    A T    P+ + APE I  +K+ +K
Sbjct: 144 AARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 200
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLC 123
           +D+WS G ++++  + G+ P+ G    ++   +     +  P G   E++ D ++LC
Sbjct: 201 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY-DLMNLC 256

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+L+ T       KI DFG +++L   +    A T    P+ + APE I  +K+ +K
Sbjct: 138 AARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 194
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLC 123
           +D+WS G ++++  + G+ P+ G    ++   +     +  P G   E++ D ++LC
Sbjct: 195 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY-DLMNLC 250

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-PL-YMAPEIIQNHKYDAKAD 69
           A +N+LVS+N+    +K+GDFG +R +          G  P+ +MAPE I   ++ + +D
Sbjct: 140 AARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 196
Query: 70  LWSVGAILFQ-LVTGKPPFDGSNQLQLFQNILTSTELRFPP 109
           +W  G  +++ L+ G  PF G     +   I     L  PP
Sbjct: 197 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP 237

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-PL-YMAPEIIQNHKYDAKAD 69
           A +N+LVS+N+    +K+GDFG +R +          G  P+ +MAPE I   ++ + +D
Sbjct: 143 AARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 199
Query: 70  LWSVGAILFQ-LVTGKPPFDGSNQLQLFQNILTSTELRFPP 109
           +W  G  +++ L+ G  PF G     +   I     L  PP
Sbjct: 200 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP 240

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 6/101 (5%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-PL-YMAPEIIQNHKYDAKAD 69
           A +N+LVS+N+    +K+GDFG +R +          G  P+ +MAPE I   ++ + +D
Sbjct: 166 AARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 222
Query: 70  LWSVGAILFQ-LVTGKPPFDGSNQLQLFQNILTSTELRFPP 109
           +W  G  +++ L+ G  PF G     +   I     L  PP
Sbjct: 223 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP 263

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 13/115 (11%)
Query: 28  KIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDA-KADLWSVGAILFQLVTGKPP 86
           K+ DFG    L  +   D   G+ +Y  PE I  H+Y A  A +WS+G +L+ +V G  P
Sbjct: 180 KLIDFGSGALLHDEPYTD-FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP 238
Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF 141
           F+        Q IL + EL FP      + PDC  L R  L   P  R + +E  
Sbjct: 239 FERD------QEILEA-ELHFP----AHVSPDCCALIRRCLAPKPSSRPSLEEIL 282

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-PL-YMAPEIIQNHKYDAKAD 69
           A +N+LVS+N+    +K+GDFG +R +          G  P+ +MAPE I   ++ + +D
Sbjct: 135 AARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 191
Query: 70  LWSVGAILFQ-LVTGKPPFDGSNQLQLFQNILTSTELRFPPGA 111
           +W  G  +++ L+ G  PF G     +   I     L  PP  
Sbjct: 192 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 234

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+L+ T       KI DFG +++L   +    A T    P+ + APE I  +K+ +K
Sbjct: 138 AARNVLLVTQHYA---KISDFGLSKALRADENXYKAQTHGKWPVKWYAPECINYYKFSSK 194
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLC 123
           +D+WS G ++++  + G+ P+ G    ++   +     +  P G   E++ D ++LC
Sbjct: 195 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY-DLMNLC 250

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+L+ T       KI DFG +++L   +    A T    P+ + APE I  +K+ +K
Sbjct: 132 AARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 188
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLC 123
           +D+WS G ++++  + G+ P+ G    ++   +     +  P G   E++ D ++LC
Sbjct: 189 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY-DLMNLC 244

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQ--DLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  +  D      G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 170 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 229
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 230 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 271

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-PL-YMAPEIIQNHKYDAKAD 69
           A +N+LVS+N+    +K+GDFG +R +          G  P+ +MAPE I   ++ + +D
Sbjct: 138 AARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 194
Query: 70  LWSVGAILFQ-LVTGKPPFDGSNQLQLFQNILTSTELRFPPGA 111
           +W  G  +++ L+ G  PF G     +   I     L  PP  
Sbjct: 195 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 237

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG  R     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFGLCRH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQ--DLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  +  D      G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 173 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 232
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 233 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 274

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQ--DLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  +  D      G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 173 VKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 232
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 233 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 274

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQ--DLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  +  D      G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 177 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 236
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 237 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 278

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQ--DLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  +  D      G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 172 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 232 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 273

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-PL-YMAPEIIQNHKYDAKAD 69
           A +N+LVS+N+    +K+GDFG +R +          G  P+ +MAPE I   ++ + +D
Sbjct: 138 AARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 194
Query: 70  LWSVGAILFQ-LVTGKPPFDGSNQLQLFQNILTSTELRFPPGA 111
           +W  G  +++ L+ G  PF G     +   I     L  PP  
Sbjct: 195 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 237

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV    V   +KIGDFG +R +   D       + L   +M PE I   K+  ++
Sbjct: 185 ATRNCLVGQGLV---VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTES 241
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T GK P+   +  +    I    EL  P        P+   + R   
Sbjct: 242 DVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP----RACPPEVYAIMRGCW 297
Query: 128 RQNPVERITFKE 139
           ++ P +R + K+
Sbjct: 298 QREPQQRHSIKD 309

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQ-----NHKYDAK 67
           QN+L++ N     +K+ DFG +  L       +T  G+P +MAPE+I      +  YD K
Sbjct: 158 QNVLLTEN---AEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFK 214
Query: 68  ADLWSVGAILFQLVTGKPPF 87
           +DLWS+G    ++  G PP 
Sbjct: 215 SDLWSLGITAIEMAEGAPPL 234

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     + +    +  Y APE+I    Y    D+WSVG I+ ++V  K  
Sbjct: 165 LKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKIL 224
Query: 87  FDGSNQLQLFQNILTSTELRFP-PGAIEELHP 117
           F G + +  +  ++   +L  P P  +++L P
Sbjct: 225 FPGRDYIDQWNKVI--EQLGTPCPAFMKKLQP 254

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQ--DLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  +  D      G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 231 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 290
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 291 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 332

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 38/74 (51%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     + +    +  Y APE+I    Y    DLWSVG I+ ++V  K  
Sbjct: 165 LKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKIL 224
Query: 87  FDGSNQLQLFQNIL 100
           F G + +  +  ++
Sbjct: 225 FPGRDYIDQWNKVI 238

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQ--DLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  +  D      G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 172 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 232 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 273

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 18  VSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAI 76
           V+ NE +  L+I DFG AR    +        +  Y APEI+ N   Y+   D+WSVG I
Sbjct: 162 VAVNEDSE-LRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 77  LFQLVTGKPPFDGSNQLQLFQNIL 100
           + +L+ GK  F GS+ +   + I+
Sbjct: 219 MAELLQGKALFPGSDYIDQLKRIM 242

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+LV++N V    K+ DFG +R L   P+    T  G  P+ + APE I   K+ + 
Sbjct: 143 AARNILVNSNLVC---KVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA 199
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFPPG-----AIEELHPD 118
           +D+WS G +++++++   +P +D SN     Q+++ + E   R PP      A+ +L  D
Sbjct: 200 SDVWSYGIVMWEVMSYGERPYWDMSN-----QDVIKAIEEGYRLPPPMDCPIALHQLMLD 254
Query: 119 C 119
           C
Sbjct: 255 C 255

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 18  VSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAI 76
           V+ NE +  L+I DFG AR    +        +  Y APEI+ N   Y+   D+WSVG I
Sbjct: 162 VAVNEDSE-LRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 218
Query: 77  LFQLVTGKPPFDGSNQLQLFQNIL 100
           + +L+ GK  F GS+ +   + I+
Sbjct: 219 MAELLQGKALFPGSDYIDQLKRIM 242

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTL----CGSPL----YMAPEIIQNHK 63
           A +N +V+ +     +KIGDFG  R     D+ +T      G  L    +MAPE +++  
Sbjct: 157 AARNCMVAHDFT---VKIGDFGMTR-----DIYETAYYRKGGKGLLPVRWMAPESLKDGV 208
Query: 64  YDAKADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL 122
           +   +D+WS G +L+++ +  + P+ G +  Q+ + ++    L  P    E +     DL
Sbjct: 209 FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCPERV----TDL 264
Query: 123 CRCLLRQNPVERITFKEFFN 142
            R   + NP  R TF E  N
Sbjct: 265 MRMCWQFNPKMRPTFLEIVN 284

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+LV++N V    K+ DFG +R L   P+    T  G  P+ + APE I   K+ + 
Sbjct: 137 AARNILVNSNLVC---KVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA 193
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFPPG-----AIEELHPD 118
           +D+WS G +++++++   +P +D SN     Q+++ + E   R PP      A+ +L  D
Sbjct: 194 SDVWSYGIVMWEVMSYGERPYWDMSN-----QDVIKAIEEGYRLPPPMDCPIALHQLMLD 248
Query: 119 C 119
           C
Sbjct: 249 C 249

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           +NLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 135 ENLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 191
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 192 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 251
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 252 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 297

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           +NLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 133 ENLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 190 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 249
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 250 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           +NLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 134 ENLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 190
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 191 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 250
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 251 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 296

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y    DLWSVG I+ ++V  K  
Sbjct: 159 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKIL 218
Query: 87  FDGSNQLQLFQNIL 100
           F G + +  +  ++
Sbjct: 219 FPGRDYIDQWNKVI 232

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 37/74 (50%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y    DLWSVG I+ ++V  K  
Sbjct: 170 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKIL 229
Query: 87  FDGSNQLQLFQNIL 100
           F G + +  +  ++
Sbjct: 230 FPGRDYIDQWNKVI 243

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 22/128 (17%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKADLW 71
           N+LVS    + V KI DFG AR            G+     + APE I    +  K+D+W
Sbjct: 308 NILVSA---SLVCKIADFGLAR-----------VGAKFPIKWTAPEAINFGSFTIKSDVW 353
Query: 72  SVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           S G +L ++VT G+ P+ G +  ++ + +     +  P    EEL+     + RC  +  
Sbjct: 354 SFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYN---IMMRC-WKNR 409
Query: 131 PVERITFK 138
           P ER TF+
Sbjct: 410 PEERPTFE 417

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           +NLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 132 ENLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 188
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 189 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 248
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 249 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 294

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 29/166 (17%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKA-DLW 71
           +NLL++T      +K+ DFG AR+   P         +  Y APEI+   KY + A D+W
Sbjct: 133 ENLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIW 189
Query: 72  SVGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP------------------- 108
           S+G I  ++VT +  F G +++    ++F+ + T  E+ +P                   
Sbjct: 190 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQD 249
Query: 109 -PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
               +  L  D   L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 250 FSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 295

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 58/115 (50%), Gaps = 10/115 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N    ++KIGDFG +R +   D       + L   +M PE I   K+  ++
Sbjct: 155 ATRNCLVGEN---LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 211
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           D+WS+G +L+++ T GK P+   +  ++ + I     L+ P   P  + EL   C
Sbjct: 212 DVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCPQEVYELMLGC 266

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 18/96 (18%)
Query: 26  VLKIGDFGFARSLTPQDLADTL-------------CGSPLYMAPEIIQNHKYDAKADLWS 72
           V+K+GDFG   ++   +   T+              G+ LYM+PE I  + Y  K D++S
Sbjct: 202 VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFS 261
Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP 108
           +G ILF+L+     +  S Q++  + I     L+FP
Sbjct: 262 LGLILFELL-----YSFSTQMERVRIITDVRNLKFP 292

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 3/103 (2%)
Query: 1   MCYVFMIVSANACQNLLVSTNEVTP---VLKIGDFGFARSLTPQDLADTLCGSPLYMAPE 57
           +C +  + SA      L  +N V      LKI DFG AR+     +      +  Y APE
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPE 195
Query: 58  IIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           +I    Y    D+WSVG I+ +++ G   F G++ +  +  ++
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+LV++N V    K+ DFG +R L   P+    T  G  P+ + APE I   K+ + 
Sbjct: 158 AARNILVNSNLVC---KVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSA 214
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFPPG-----AIEELHPD 118
           +D+WS G +++++++   +P +D SN     Q+++ + E   R PP      A+ +L  D
Sbjct: 215 SDVWSYGIVMWEVMSYGERPYWDMSN-----QDVIKAIEEGYRLPPPMDCPIALHQLMLD 269
Query: 119 C 119
           C
Sbjct: 270 C 270

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 30/163 (18%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLW 71
           QNLL++ N     LK+ +FG AR+   P         +  Y  P+++   K Y    D+W
Sbjct: 130 QNLLINRNGE---LKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186
Query: 72  SVGAILFQLV-TGKPPFDGSN---QLQ-LFQNILTSTELRFPP----------------- 109
           S G I  +L   G+P F G++   QL+ +F+ + T TE ++P                  
Sbjct: 187 SAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATT 246
Query: 110 ---GAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL 149
                + +L+    DL + LL+ NPV+RI+ +E   H +  + 
Sbjct: 247 SLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV       V+KIGDFG +R +   D       + L   +M PE I   K+  ++
Sbjct: 156 ATRNCLVGQG---LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTES 212
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T GK P+   +  +    I    EL  P        P+   + R   
Sbjct: 213 DVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP----RACPPEVYAIMRGCW 268
Query: 128 RQNPVERITFKE 139
           ++ P +R + K+
Sbjct: 269 QREPQQRHSIKD 280

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           L+I DFG AR    +        +  Y APEI+ N   Y+   D+WSVG I+ +L+ GK 
Sbjct: 162 LRILDFGLARQADEE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKA 219
Query: 86  PFDGSNQLQLFQNIL 100
            F GS+ +   + I+
Sbjct: 220 LFPGSDYIDQLKRIM 234

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV    V   +KIGDFG +R +   D       + L   +M PE I   K+  ++
Sbjct: 162 ATRNCLVGQGLV---VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTES 218
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +L+++ T GK P+   +  +    I    EL  P        P+   + R   
Sbjct: 219 DVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERP----RACPPEVYAIMRGCW 274
Query: 128 RQNPVERITFKE 139
           ++ P +R + K+
Sbjct: 275 QREPQQRHSIKD 286

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 26  VLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWSVGAILFQLVT- 82
           + KI DFG AR +   +  A      P+ + APE     ++  K+D+WS G +L +LVT 
Sbjct: 143 ICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTK 202
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDCVDLCRCLLRQNPVERITFK 138
           G+ P+ G N  ++ + +     +  P   P ++ EL   C        +++P ER TF+
Sbjct: 203 GRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMIHC-------WKKDPEERPTFE 254

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQDL--ADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  ++        G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 172 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 232 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 273

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 32/159 (20%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
           NLL+  N V   LK+ DFG A+S  +P         +  Y APE++   + Y    D+W+
Sbjct: 142 NLLLDENGV---LKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWA 198
Query: 73  VGAILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFP--------------PGAIEE 114
           VG IL +L+   P   G + L    ++F+ + T TE ++P              PG    
Sbjct: 199 VGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGI--P 256
Query: 115 LH-------PDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           LH        D +DL + L   NP  RIT  +    ++ 
Sbjct: 257 LHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 295

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQDL--ADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  ++        G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 171 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 230
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 231 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 272

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQDL--ADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  ++        G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 169 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 228
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 229 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 270

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQDL--ADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  ++        G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 167 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 226
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 227 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 268

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQDL--ADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  ++        G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 172 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 231
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 232 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 273

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 30/163 (18%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLW 71
           QNLL++ N     LK+ DFG AR+   P         +  Y  P+++   K Y    D+W
Sbjct: 130 QNLLINRNGE---LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186
Query: 72  SVGAILFQLVTGKPPF----DGSNQLQ-LFQNILTSTELRFPP----------------- 109
           S G I  +L     P     D  +QL+ +F+ + T TE ++P                  
Sbjct: 187 SAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATT 246
Query: 110 ---GAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL 149
                + +L+    DL + LL+ NPV+RI+ +E   H +  + 
Sbjct: 247 SLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 49.3 bits (116), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 13/142 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N LV  N V   +KI DFG +R++   D   AD     P+ +M PE I  ++Y  ++
Sbjct: 201 ATRNCLVGENMV---VKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTES 257
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +L+++ + G  P+ G    ++   +     L  P     EL+    +L R   
Sbjct: 258 DVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELY----NLMRLCW 313
Query: 128 RQNPVERITFKEFFNHRFLGEL 149
            + P +R +F     HR L  +
Sbjct: 314 SKLPADRPSFCSI--HRILQRM 333

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 49.3 bits (116), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQDLADT--LCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  ++        G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 171 VKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 230
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 231 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 272

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQDL--ADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  ++        G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 191 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 250
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 251 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 292

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 22  EVTPVLKIGDFGFARSLTPQDLADT--LCGSPLYMAPEIIQNH-----KYDAKADLWSVG 74
           +V   +++ DFG    +       +    G+P Y++PEI+Q       KY  + D WS+G
Sbjct: 225 DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLG 284
Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL--RQNPV 132
             +++++ G+ PF   + ++ +  I+   E    P  + ++  +  DL + L+  R+  +
Sbjct: 285 VCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRL 344
Query: 133 ERITFKEFFNHRFL 146
            +   ++F  H F 
Sbjct: 345 GQNGIEDFKKHAFF 358

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQDL--ADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  ++        G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 170 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 229
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 230 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 271

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQDL--ADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  ++        G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 164 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 223
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 224 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 265

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLA-DTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           NLLV        +K+ DFG +R      L+  +  G+P +MAPE++++   + K+D++S 
Sbjct: 169 NLLVDKKYT---VKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSF 225
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNI-LTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           G IL++L T + P+   N  Q+   +      L  P      L+P    +        P 
Sbjct: 226 GVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP----RNLNPQVAAIIEGCWTNEPW 281
Query: 133 ERITF 137
           +R +F
Sbjct: 282 KRPSF 286

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 27  LKIGDFGFARSLTPQDL--ADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  ++        G+ L   +MA E +Q  K+  K+D+WS G +L++L+
Sbjct: 190 VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELM 249
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           T G PP+   N   +   +L    L  P   P  + E+   C
Sbjct: 250 TRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKC 291

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N++V ++     LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG
Sbjct: 156 NIVVKSDXT---LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP-PGAIEELHP 117
            I+ ++V  K  F G + +  +  ++   +L  P P  +++L P
Sbjct: 213 CIMGEMVRHKILFPGRDYIDQWNKVI--EQLGTPCPEFMKKLQP 254

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N++V ++     LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG
Sbjct: 156 NIVVKSDXT---LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP-PGAIEELHP 117
            I+ ++V  K  F G + +  +  ++   +L  P P  +++L P
Sbjct: 213 CIMGEMVRHKILFPGRDYIDQWNKVI--EQLGTPCPEFMKKLQP 254

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 48.9 bits (115), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG I+ ++V  K  
Sbjct: 203 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 262
Query: 87  FDGSNQLQLFQNILTSTELRFP-PGAIEELHP 117
           F G + +  +  ++   +L  P P  +++L P
Sbjct: 263 FPGRDYIDQWNKVI--EQLGTPCPEFMKKLQP 292

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR    +     +  +  Y APE+I +   Y+   D+WSVG I+ +++TGK 
Sbjct: 165 LKILDFGLARHADAEMTGYVV--TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
Query: 86  PFDGSNQLQLFQNILTST 103
            F G + L     IL  T
Sbjct: 223 LFKGKDYLDQLTQILKVT 240

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI  FG AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILGFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DFG AR    +     +  +  Y APE+I +   Y+   D+WSVG I+ +++TGK 
Sbjct: 183 LKILDFGLARHADAEMTGYVV--TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT 240
Query: 86  PFDGSNQLQLFQNILTST 103
            F G + L     IL  T
Sbjct: 241 LFKGKDYLDQLTQILKVT 258

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG I+ ++V  K  
Sbjct: 203 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 262
Query: 87  FDGSNQLQLFQNILTSTELRFP-PGAIEELHP 117
           F G + +  +  ++   +L  P P  +++L P
Sbjct: 263 FPGRDYIDQWNKVI--EQLGTPCPEFMKKLQP 292

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 22  EVTPVLKIGDFGFARSLTPQDLADT--LCGSPLYMAPEIIQNH-----KYDAKADLWSVG 74
           +V   +++ DFG    +       +    G+P Y++PEI+Q       KY  + D WS+G
Sbjct: 209 DVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLG 268
Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL--RQNPV 132
             +++++ G+ PF   + ++ +  I+   E    P  + ++  +  DL + L+  R+  +
Sbjct: 269 VCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRL 328
Query: 133 ERITFKEFFNHRFL 146
            +   ++F  H F 
Sbjct: 329 GQNGIEDFKKHAFF 342

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N++V ++     LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG
Sbjct: 156 NIVVKSDXT---LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP-PGAIEELHP 117
            I+ ++V  K  F G + +  +  ++   +L  P P  +++L P
Sbjct: 213 CIMGEMVRHKILFPGRDYIDQWNKVI--EQLGTPCPEFMKKLQP 254

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG I+ ++V  K  
Sbjct: 166 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 225
Query: 87  FDGSNQLQLFQNILTSTELRFP-PGAIEELHP 117
           F G + +  +  ++   +L  P P  +++L P
Sbjct: 226 FPGRDYIDQWNKVI--EQLGTPCPEFMKKLQP 255

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG I+ ++V  K  
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
Query: 87  FDGSNQLQLFQNILTSTELRFP-PGAIEELHP 117
           F G + +  +  ++   +L  P P  +++L P
Sbjct: 225 FPGRDYIDQWNKVI--EQLGTPCPEFMKKLQP 254

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N++V ++     LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG
Sbjct: 156 NIVVKSDXT---LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 212
Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP-PGAIEELHP 117
            I+ ++V  K  F G + +  +  ++   +L  P P  +++L P
Sbjct: 213 CIMGEMVRHKILFPGRDYIDQWNKVI--EQLGTPCPEFMKKLQP 254

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG I+ ++V  K  
Sbjct: 165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 224
Query: 87  FDGSNQLQLFQNILTSTELRFP-PGAIEELHP 117
           F G + +  +  ++   +L  P P  +++L P
Sbjct: 225 FPGRDYIDQWNKVI--EQLGTPCPEFMKKLQP 254

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG I+ ++V  K  
Sbjct: 166 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 225
Query: 87  FDGSNQLQLFQNILTSTELRFP-PGAIEELHP 117
           F G + +  +  ++   +L  P P  +++L P
Sbjct: 226 FPGRDYIDQWNKVI--EQLGTPCPEFMKKLQP 255

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 14/134 (10%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L++   +T   KI DFG AR +   D    + G+   P+ +MAPE I N  Y  +
Sbjct: 195 AARNILLTHGRIT---KICDFGLARDIK-NDSNYVVKGNARLPVKWMAPESIFNCVYTFE 250
Query: 68  ADLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRC 125
           +D+WS G  L++L + G  P+ G     + ++ I     +  P  A  E++    D+ + 
Sbjct: 251 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY----DIMKT 306
Query: 126 LLRQNPVERITFKE 139
               +P++R TFK+
Sbjct: 307 CWDADPLKRPTFKQ 320

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 48.5 bits (114), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+L+++N V    K+ DFG +R L   P+    T  G  P+ + APE I   K+ + 
Sbjct: 151 AARNILINSNLVC---KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSA 207
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEELHPD 118
           +D+WS G +++++V+   +P ++ +N     Q+++ + E   R P     P A+ +L  D
Sbjct: 208 SDVWSYGIVMWEVVSYGERPYWEMTN-----QDVIKAVEEGYRLPSPMDCPAALYQLMLD 262
Query: 119 C 119
           C
Sbjct: 263 C 263

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 14/134 (10%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L++   +T   KI DFG AR +   D    + G+   P+ +MAPE I N  Y  +
Sbjct: 188 AARNILLTHGRIT---KICDFGLARDIK-NDSNYVVKGNARLPVKWMAPESIFNCVYTFE 243
Query: 68  ADLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRC 125
           +D+WS G  L++L + G  P+ G     + ++ I     +  P  A  E++    D+ + 
Sbjct: 244 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY----DIMKT 299
Query: 126 LLRQNPVERITFKE 139
               +P++R TFK+
Sbjct: 300 CWDADPLKRPTFKQ 313

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N++V ++     LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG
Sbjct: 149 NIVVKSDXT---LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 205
Query: 75  AILFQLVTGKPPFDGSNQLQLFQNIL 100
            I+ ++V  K  F G + +  +  ++
Sbjct: 206 CIMGEMVRHKILFPGRDYIDQWNKVI 231

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK-- 84
           +K+ DFG +  L    +A++  G+  YMAPE +Q   Y  ++D+WS+G  L +L  G+  
Sbjct: 154 IKLCDFGVSGQLI-DSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
Query: 85  -PPFDGSNQLQLFQNILTSTE 104
            PP D      +F   +   E
Sbjct: 213 IPPPDAKELEAIFGRPVVDGE 233

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 14/134 (10%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L++   +T   KI DFG AR +   D    + G+   P+ +MAPE I N  Y  +
Sbjct: 190 AARNILLTHGRIT---KICDFGLARDIK-NDSNYVVKGNARLPVKWMAPESIFNCVYTFE 245
Query: 68  ADLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRC 125
           +D+WS G  L++L + G  P+ G     + ++ I     +  P  A  E++    D+ + 
Sbjct: 246 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY----DIMKT 301
Query: 126 LLRQNPVERITFKE 139
               +P++R TFK+
Sbjct: 302 CWDADPLKRPTFKQ 315

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG I+ ++V  K  
Sbjct: 164 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 223
Query: 87  FDGSNQLQLFQNILTSTELRFP-PGAIEELHP 117
           F G + +  +  ++   +L  P P  +++L P
Sbjct: 224 FPGRDYIDQWNKVI--EQLGTPCPEFMKKLQP 253

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG I+ ++V  K  
Sbjct: 158 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 217
Query: 87  FDGSNQLQLFQNILTSTELRFP-PGAIEELHP 117
           F G + +  +  ++   +L  P P  +++L P
Sbjct: 218 FPGRDYIDQWNKVI--EQLGTPCPEFMKKLQP 247

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 14/134 (10%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L++   +T   KI DFG AR +   D    + G+   P+ +MAPE I N  Y  +
Sbjct: 195 AARNILLTHGRIT---KICDFGLARHIK-NDSNYVVKGNARLPVKWMAPESIFNCVYTFE 250
Query: 68  ADLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRC 125
           +D+WS G  L++L + G  P+ G     + ++ I     +  P  A  E++    D+ + 
Sbjct: 251 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY----DIMKT 306
Query: 126 LLRQNPVERITFKE 139
               +P++R TFK+
Sbjct: 307 CWDADPLKRPTFKQ 320

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG I+ ++V  K  
Sbjct: 159 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 218
Query: 87  FDGSNQLQLFQNIL 100
           F G + +  +  ++
Sbjct: 219 FPGRDYIDQWNKVI 232

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +V+ +     +KIGDFG  R +   D         L   +M+PE +++  +   +
Sbjct: 159 AARNCMVAED---FTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYS 215
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCV-DLCRCL 126
           D+WS G +L+++ T  + P+ G +  Q+ + ++    L  P        PD + +L R  
Sbjct: 216 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC-----PDMLFELMRMC 270
Query: 127 LRQNPVERITFKEFFN 142
            + NP  R +F E  +
Sbjct: 271 WQYNPKMRPSFLEIIS 286

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-PL-YMAPEIIQNHKYDAKAD 69
           A +N+LVS    T  +K+GDFG +R +          G  P+ +MAPE I   ++ + +D
Sbjct: 518 AARNVLVSA---TDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 574
Query: 70  LWSVGAILFQ-LVTGKPPFDGSNQLQLFQNILTSTELRFPP 109
           +W  G  +++ L+ G  PF G     +   I     L  PP
Sbjct: 575 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP 615

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG I+ ++V  K  
Sbjct: 159 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL 218
Query: 87  FDGSNQLQLFQNILTSTELRFP-PGAIEELHP 117
           F G + +  +  ++   +L  P P  +++L P
Sbjct: 219 FPGRDYIDQWNKVI--EQLGTPCPEFMKKLQP 248

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI D G AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDAGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI D G AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDRGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 14/134 (10%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L++   +T   KI DFG AR +   D    + G+   P+ +MAPE I N  Y  +
Sbjct: 172 AARNILLTHGRIT---KICDFGLARDIK-NDSNYVVKGNARLPVKWMAPESIFNCVYTFE 227
Query: 68  ADLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRC 125
           +D+WS G  L++L + G  P+ G     + ++ I     +  P  A  E++    D+ + 
Sbjct: 228 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY----DIMKT 283
Query: 126 LLRQNPVERITFKE 139
               +P++R TFK+
Sbjct: 284 CWDADPLKRPTFKQ 297

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPL---YMAPEIIQNHKYDAK 67
           A +N+LV +N V    K+ DFG +R L    D A T  G  +   + APE I    + + 
Sbjct: 178 AARNVLVDSNLVC---KVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSA 234
Query: 68  ADLWSVGAILFQ-LVTGKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           +D+WS G ++++ L  G+ P+       +  ++     L  P   P A+ +L  DC
Sbjct: 235 SDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDC 290

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI DF  AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDFYLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +V+ +     +KIGDFG  R +   D         L   +M+PE +++  +   +
Sbjct: 150 AARNCMVAEDFT---VKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYS 206
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPD-CVDLCRCL 126
           D+WS G +L+++ T  + P+ G +  Q+ + ++    L  P        PD  ++L R  
Sbjct: 207 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC-----PDMLLELMRMC 261
Query: 127 LRQNPVERITFKEFFN 142
            + NP  R +F E  +
Sbjct: 262 WQYNPKMRPSFLEIIS 277

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 24/134 (17%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVGAILFQLV 81
           +K+ DFG +  L      D   G   YMAPE I         YD +AD+WS+G  L +L 
Sbjct: 164 IKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA 223
Query: 82  TGKPPFDGSNQLQLFQNILTSTELRFPP---------GAIEELHPDCVDLCRCLLRQNPV 132
           TG+ P+   N    F+ +LT      PP         G  +    DC       L ++  
Sbjct: 224 TGQFPY--KNCKTDFE-VLTKVLQEEPPLLPGHMGFSGDFQSFVKDC-------LTKDHR 273
Query: 133 ERITFKEFFNHRFL 146
           +R  + +   H F+
Sbjct: 274 KRPKYNKLLEHSFI 287

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 26  VLKIGDFGFARSLTPQDLA---DTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILFQ 79
            +KIGDFG A   +    +   + L GS L+MAPE+I+   ++ Y  ++D+++ G +L++
Sbjct: 158 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE 217
Query: 80  LVTGKPPFDGSN 91
           L+TG+ P+   N
Sbjct: 218 LMTGQLPYSNIN 229

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           NLLV        +K+ DFG +R      L +    G+P +MAPE++++   + K+D++S 
Sbjct: 169 NLLVDKKYT---VKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSF 225
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNI-LTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           G IL++L T + P+   N  Q+   +      L  P      L+P    +        P 
Sbjct: 226 GVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP----RNLNPQVAAIIEGCWTNEPW 281
Query: 133 ERITF 137
           +R +F
Sbjct: 282 KRPSF 286

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
Query: 26  VLKIGDFGFARSLTPQDLA---DTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILFQ 79
            +KIGDFG A   +    +   + L GS L+MAPE+I+   ++ Y  ++D+++ G +L++
Sbjct: 158 TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE 217
Query: 80  LVTGKPPFDGSN 91
           L+TG+ P+   N
Sbjct: 218 LMTGQLPYSNIN 229

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 11/116 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+LV++N V    K+ DFG +R L   P+    T  G  P+ + APE I   K+ + 
Sbjct: 174 AARNILVNSNLVC---KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSA 230
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           +D+WS G ++++++T G+ P+   +  ++ + I     L  P   P AI +L   C
Sbjct: 231 SDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQC 286

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 6/124 (4%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ---NHK-YDAKADLWSVGAILFQLVT 82
           +K  DFG +  L      D   G   Y APE I    N K Y  K+D+WS+G    +L  
Sbjct: 176 VKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAI 235
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN 142
            + P+D       FQ +    E   P    ++   + VD     L++N  ER T+ E   
Sbjct: 236 LRFPYDSWG--TPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
Query: 143 HRFL 146
           H F 
Sbjct: 294 HPFF 297

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 9/113 (7%)
Query: 29  IGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK---YDAKADLWSVGAILFQLVTGKP 85
           I DF  A  L  +    T+ G+  YMAPE+  + K   Y    D WS+G   ++L+ G+ 
Sbjct: 156 ITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215
Query: 86  PF--DGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT 136
           P+    S   +   +   +T + +P    +E+    V L + LL  NP +R +
Sbjct: 216 PYHIRSSTSSKEIVHTFETTVVTYPSAWSQEM----VSLLKKLLEPNPDQRFS 264

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 6/72 (8%)
Query: 26  VLKIGDFGFAR---SLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILFQ 79
            +KIGDFG A      +     + L GS L+MAPE+I+   ++ Y  ++D+++ G +L++
Sbjct: 146 TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYE 205
Query: 80  LVTGKPPFDGSN 91
           L+TG+ P+   N
Sbjct: 206 LMTGQLPYSNIN 217

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 25/155 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+LV++      +K+ DFG AR  + Q     +  +  Y APE++    Y    D+WSV
Sbjct: 149 ENILVTSGGT---VKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSV 205
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTEL---------------RFPP-------GA 111
           G I  ++   KP F G+++      I     L                FPP         
Sbjct: 206 GCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSV 265
Query: 112 IEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           + E+      L   +L  NP +RI+      H +L
Sbjct: 266 VPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Query: 27  LKIGDFGFARSLTPQDLA---DTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILFQL 80
           +KIGDFG A   +    +   + L GS L+MAPE+I+    + Y  ++D+++ G +L++L
Sbjct: 163 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 222
Query: 81  VTGKPPFDGSN 91
           +TG+ P+   N
Sbjct: 223 MTGQLPYSNIN 233

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           LKI D G AR     D       +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+ 
Sbjct: 164 LKILDGGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
Query: 86  PFDGSNQLQLFQNILTSTELRFPPGA 111
            F G++ +   + IL    L   PGA
Sbjct: 222 LFPGTDHIDQLKLIL---RLVGTPGA 244

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Query: 27  LKIGDFGFARSLTPQDLA---DTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILFQL 80
           +KIGDFG A   +    +   + L GS L+MAPE+I+    + Y  ++D+++ G +L++L
Sbjct: 171 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 230
Query: 81  VTGKPPFDGSN 91
           +TG+ P+   N
Sbjct: 231 MTGQLPYSNIN 241

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 6/71 (8%)
Query: 27  LKIGDFGFARSLTPQDLA---DTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILFQL 80
           +KIGDFG A   +    +   + L GS L+MAPE+I+    + Y  ++D+++ G +L++L
Sbjct: 143 VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
Query: 81  VTGKPPFDGSN 91
           +TG+ P+   N
Sbjct: 203 MTGQLPYSNIN 213

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +V+ +     +KIGDFG  R +   D         L   +M+PE +++  +   +
Sbjct: 187 AARNCMVAED---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 243
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCV-DLCRCL 126
           D+WS G +L+++ T  + P+ G +  Q+ + ++    L  P        PD + +L R  
Sbjct: 244 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC-----PDMLFELMRMC 298
Query: 127 LRQNPVERITFKEFFN 142
            + NP  R +F E  +
Sbjct: 299 WQYNPKMRPSFLEIIS 314

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    + + KI DFG AR +   +  A      P+ + APE I    +  K+D+WS
Sbjct: 140 NVLVSE---SLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWS 196
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L+++VT GK P+ G        +++T+    +    +E    +  D+ +   ++  
Sbjct: 197 FGILLYEIVTYGKIPYPGRTN----ADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKA 252
Query: 132 VERITF 137
            ER TF
Sbjct: 253 EERPTF 258

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 27  LKIGDFGFAR---SLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILFQL 80
           +KIGDFG A      +     + L GS L+MAPE+I+    + Y  ++D+++ G +L++L
Sbjct: 145 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 204
Query: 81  VTGKPPFDGSN 91
           +TG+ P+   N
Sbjct: 205 MTGQLPYSNIN 215

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 62/155 (40%), Gaps = 25/155 (16%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+LV++      +K+ DFG AR  + Q     +  +  Y APE++    Y    D+WSV
Sbjct: 141 ENILVTSGGT---VKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSV 197
Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTEL---------------RFPP-------GA 111
           G I  ++   KP F G+++      I     L                FPP         
Sbjct: 198 GCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSV 257
Query: 112 IEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           + E+      L   +L  NP +RI+      H +L
Sbjct: 258 VPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-PL-YMAPEIIQNHKYDAKAD 69
           A +N+LVS    T  +K+GDFG +R +          G  P+ +MAPE I   ++ + +D
Sbjct: 138 AARNVLVSA---TDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 194
Query: 70  LWSVGAILFQ-LVTGKPPFDGSNQLQLFQNILTSTELRFPPGA 111
           +W  G  +++ L+ G  PF G     +   I     L  PP  
Sbjct: 195 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNC 237

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +V+ +     +KIGDFG  R +   D         L   +M+PE +++  +   +
Sbjct: 158 AARNCMVAED---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 214
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCV-DLCRCL 126
           D+WS G +L+++ T  + P+ G +  Q+ + ++    L  P        PD + +L R  
Sbjct: 215 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC-----PDMLFELMRMC 269
Query: 127 LRQNPVERITFKEFFN 142
            + NP  R +F E  +
Sbjct: 270 WQYNPKMRPSFLEIIS 285

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 27  LKIGDFGFAR---SLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILFQL 80
           +KIGDFG A      +     + L GS L+MAPE+I+    + Y  ++D+++ G +L++L
Sbjct: 170 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 229
Query: 81  VTGKPPFDGSN 91
           +TG+ P+   N
Sbjct: 230 MTGQLPYSNIN 240

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+L+++N V    K+ DFG AR L   P+    T  G  P+ + +PE I   K+ + 
Sbjct: 174 AARNILINSNLVC---KVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEELHPD 118
           +D+WS G +L+++++   +P ++ SN     Q+++ + +   R P     P A+ +L  D
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 119 C 119
           C
Sbjct: 286 C 286

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +V+ +     +KIGDFG  R +   D         L   +M+PE +++  +   +
Sbjct: 156 AARNCMVAED---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 212
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCV-DLCRCL 126
           D+WS G +L+++ T  + P+ G +  Q+ + ++    L  P        PD + +L R  
Sbjct: 213 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC-----PDMLFELMRMC 267
Query: 127 LRQNPVERITFKEFFN 142
            + NP  R +F E  +
Sbjct: 268 WQYNPKMRPSFLEIIS 283

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +V+ +     +KIGDFG  R +   D         L   +M+PE +++  +   +
Sbjct: 152 AARNCMVAED---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 208
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCV-DLCRCL 126
           D+WS G +L+++ T  + P+ G +  Q+ + ++    L  P        PD + +L R  
Sbjct: 209 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC-----PDMLFELMRMC 263
Query: 127 LRQNPVERITFKEFFN 142
            + NP  R +F E  +
Sbjct: 264 WQYNPKMRPSFLEIIS 279

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 27  LKIGDFGFAR---SLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILFQL 80
           +KIGDFG A      +     + L GS L+MAPE+I+    + Y  ++D+++ G +L++L
Sbjct: 171 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 230
Query: 81  VTGKPPFDGSN 91
           +TG+ P+   N
Sbjct: 231 MTGQLPYSNIN 241

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPL---YMAPEIIQNHKYDAK 67
           A +N+LV +N V    K+ DFG +R L    D A T  G  +   + APE I    + + 
Sbjct: 178 AARNVLVDSNLVC---KVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSA 234
Query: 68  ADLWSVGAILFQ-LVTGKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDC 119
           +D+WS G ++++ L  G+ P+       +  ++     L  P   P A+ +L  DC
Sbjct: 235 SDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALHQLMLDC 290

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +V+ +     +KIGDFG  R +   D         L   +M+PE +++  +   +
Sbjct: 159 AARNCMVAED---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 215
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCV-DLCRCL 126
           D+WS G +L+++ T  + P+ G +  Q+ + ++    L  P        PD + +L R  
Sbjct: 216 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC-----PDMLFELMRMC 270
Query: 127 LRQNPVERITFKEFFN 142
            + NP  R +F E  +
Sbjct: 271 WQYNPKMRPSFLEIIS 286

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 27  LKIGDFGFAR---SLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILFQL 80
           +KIGDFG A      +     + L GS L+MAPE+I+    + Y  ++D+++ G +L++L
Sbjct: 148 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 207
Query: 81  VTGKPPFDGSN 91
           +TG+ P+   N
Sbjct: 208 MTGQLPYSNIN 218

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 27  LKIGDFGFAR---SLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILFQL 80
           +KIGDFG A      +     + L GS L+MAPE+I+    + Y  ++D+++ G +L++L
Sbjct: 148 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 207
Query: 81  VTGKPPFDGSN 91
           +TG+ P+   N
Sbjct: 208 MTGQLPYSNIN 218

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +V+ +     +KIGDFG  R +   D         L   +M+PE +++  +   +
Sbjct: 165 AARNCMVAEDFT---VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 221
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCV-DLCRCL 126
           D+WS G +L+++ T  + P+ G +  Q+ + ++    L  P        PD + +L R  
Sbjct: 222 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC-----PDMLFELMRMC 276
Query: 127 LRQNPVERITFKEFFN 142
            + NP  R +F E  +
Sbjct: 277 WQYNPKMRPSFLEIIS 292

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 27  LKIGDFGFAR---SLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILFQL 80
           +KIGDFG A      +     + L GS L+MAPE+I+    + Y  ++D+++ G +L++L
Sbjct: 143 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
Query: 81  VTGKPPFDGSN 91
           +TG+ P+   N
Sbjct: 203 MTGQLPYSNIN 213

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +V+ +     +KIGDFG  R +   D         L   +M+PE +++  +   +
Sbjct: 155 AARNCMVAEDFT---VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 211
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCV-DLCRCL 126
           D+WS G +L+++ T  + P+ G +  Q+ + ++    L  P        PD + +L R  
Sbjct: 212 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC-----PDMLFELMRMC 266
Query: 127 LRQNPVERITFKEFFN 142
            + NP  R +F E  +
Sbjct: 267 WQYNPKMRPSFLEIIS 282

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +V+ +     +KIGDFG  R +   D         L   +M+PE +++  +   +
Sbjct: 158 AARNCMVAEDFT---VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 214
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCV-DLCRCL 126
           D+WS G +L+++ T  + P+ G +  Q+ + ++    L  P        PD + +L R  
Sbjct: 215 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC-----PDMLFELMRMC 269
Query: 127 LRQNPVERITFKEFFN 142
            + NP  R +F E  +
Sbjct: 270 WQYNPKMRPSFLEIIS 285

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 27  LKIGDFGFAR---SLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILFQL 80
           +KIGDFG A      +     + L GS L+MAPE+I+    + Y  ++D+++ G +L++L
Sbjct: 143 VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYEL 202
Query: 81  VTGKPPFDGSN 91
           +TG+ P+   N
Sbjct: 203 MTGQLPYSNIN 213

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 14/108 (12%)
Query: 27  LKIGDFGFAR---SLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILFQL 80
           +KIGDFG A      +     +   GS L+MAPE+I+   N+ +  ++D++S G +L++L
Sbjct: 171 VKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYEL 230
Query: 81  VTGKPPFDGSNQ----LQLFQNILTSTEL----RFPPGAIEELHPDCV 120
           +TG+ P+   N     + +      S +L    +  P A++ L  DCV
Sbjct: 231 MTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCV 278

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +V+ +     +KIGDFG  R +   D         L   +M+PE +++  +   +
Sbjct: 165 AARNCMVAEDFT---VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 221
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCV-DLCRCL 126
           D+WS G +L+++ T  + P+ G +  Q+ + ++    L  P        PD + +L R  
Sbjct: 222 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC-----PDMLFELMRMC 276
Query: 127 LRQNPVERITFKEFFN 142
            + NP  R +F E  +
Sbjct: 277 WQYNPKMRPSFLEIIS 292

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 10/121 (8%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLVT- 82
           +KIGDFG  R +   D         L   +M+PE +++  +   +D+WS G +L+++ T 
Sbjct: 164 VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 223
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPD-CVDLCRCLLRQNPVERITFKEFF 141
            + P+ G +  Q+ + ++    L  P        PD  ++L R   + NP  R +F E  
Sbjct: 224 AEQPYQGLSNEQVLRFVMEGGLLDKPDNC-----PDMLLELMRMCWQYNPKMRPSFLEII 278
Query: 142 N 142
           +
Sbjct: 279 S 279

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 28  KIGDFGFARS---LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
           KI DFG AR+        +   + G+  YMAPE ++  +   K+D++S G +L +++TG 
Sbjct: 173 KISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGL 231
Query: 85  PPFDGSNQLQLF 96
           P  D   + QL 
Sbjct: 232 PAVDEHREPQLL 243

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+LV++      +K+ DFG AR  + Q     +  +  Y APE++    Y    D+WSV
Sbjct: 141 ENILVTSGGT---VKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSV 197
Query: 74  GAILFQLVTGKPPFDGSNQ 92
           G I  ++   KP F G+++
Sbjct: 198 GCIFAEMFRRKPLFCGNSE 216

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 24/118 (20%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-----PL-YMAPEIIQNHKYD 65
           A +N+LV++N V    K+ DFG +R L       T   S     P+ + APE I   K+ 
Sbjct: 143 AARNILVNSNLVC---KVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFT 199
Query: 66  AKADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFPPGAIEELHPDC 119
           + +D WS G +++++++   +P +D SN     Q+++ + E   R PP       PDC
Sbjct: 200 SASDAWSYGIVMWEVMSFGERPYWDMSN-----QDVINAIEQDYRLPP------PPDC 246

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 28  KIGDFGFARS---LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
           KI DFG AR+        +   + G+  YMAPE ++  +   K+D++S G +L +++TG 
Sbjct: 173 KISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGL 231
Query: 85  PPFDGSNQLQLF 96
           P  D   + QL 
Sbjct: 232 PAVDEHREPQLL 243

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+L+++N    V K+ DFG +R L   P+    T  G  P+ + +PE I   K+ + 
Sbjct: 145 AARNILINSN---LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 201
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEELHPD 118
           +D+WS G +L+++++   +P ++ SN     Q+++ + +   R P     P A+ +L  D
Sbjct: 202 SDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLD 256
Query: 119 C 119
           C
Sbjct: 257 C 257

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 44/161 (27%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK-- 84
           +K+ DFG +  L    +A++  G+  YM+PE +Q   Y  ++D+WS+G  L ++  G+  
Sbjct: 206 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
Query: 85  -PPFDGSNQLQLF-------------------QNILTSTEL-RFPPGAIEELHPDCVD-- 121
            PP D + +L+L                       L+S  +   PP AI EL    V+  
Sbjct: 265 IPPPD-AKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEP 323
Query: 122 ----------------LCRCLLRQNPVERITFKEFFNHRFL 146
                           + +CL++ NP ER   K+   H F+
Sbjct: 324 PPKLPSAVFSLEFQDFVNKCLIK-NPAERADLKQLMVHAFI 363

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+L+++N    V K+ DFG +R L   P+    T  G  P+ + +PE I   K+ + 
Sbjct: 145 AARNILINSN---LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 201
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEELHPD 118
           +D+WS G +L+++++   +P ++ SN     Q+++ + +   R P     P A+ +L  D
Sbjct: 202 SDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLD 256
Query: 119 C 119
           C
Sbjct: 257 C 257

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 28  KIGDFGFARS---LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
           KI DFG AR+        +   + G+  YMAPE ++  +   K+D++S G +L +++TG 
Sbjct: 167 KISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGL 225
Query: 85  PPFDGSNQLQLF 96
           P  D   + QL 
Sbjct: 226 PAVDEHREPQLL 237

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+L+++N V    K+ DFG +R L   P+    T  G  P+ + +PE I   K+ + 
Sbjct: 162 AARNILINSNLVC---KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 218
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEELHPD 118
           +D+WS G +L+++++   +P ++ SN     Q+++ + +   R P     P A+ +L  D
Sbjct: 219 SDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLD 273
Query: 119 C 119
           C
Sbjct: 274 C 274

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 42/160 (26%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK-- 84
           +K+ DFG +  L    +A++  G+  YM+PE +Q   Y  ++D+WS+G  L ++  G+  
Sbjct: 144 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 85  -PPFDGSNQLQLF------------------QNILTSTEL-RFPPGAIEELHPDCVD--- 121
            PP D      +F                     L+S  +   PP AI EL    V+   
Sbjct: 203 IPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP 262
Query: 122 ---------------LCRCLLRQNPVERITFKEFFNHRFL 146
                          + +CL++ NP ER   K+   H F+
Sbjct: 263 PKLPSGVFSLEFQDFVNKCLIK-NPAERADLKQLMVHAFI 301

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + + G+  Y+APE+++  ++ A+  D
Sbjct: 133 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVD 189
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 190 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 246
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 247 ENPSARITIPDIKKDRW 263

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + + G+  Y+APE+++  ++ A+  D
Sbjct: 133 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVD 189
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 190 VWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 246
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 247 ENPSARITIPDIKKDRW 263

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 61/118 (51%), Gaps = 24/118 (20%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT-----PQDLADTLCGSPL-YMAPEIIQNHKYD 65
           A +N+LV++N V    K+ DFG +R L      P + +      P+ + APE I   K+ 
Sbjct: 145 AARNILVNSNLVC---KVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFT 201
Query: 66  AKADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFPPGAIEELHPDC 119
           + +D WS G +++++++   +P +D SN     Q+++ + E   R PP       PDC
Sbjct: 202 SASDAWSYGIVMWEVMSFGERPYWDMSN-----QDVINAIEQDYRLPP------PPDC 248

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 44/161 (27%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK-- 84
           +K+ DFG +  L    +A++  G+  YM+PE +Q   Y  ++D+WS+G  L ++  G+  
Sbjct: 144 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 85  -PPFDGSNQLQLF-------------------QNILTSTEL-RFPPGAIEELHPDCVD-- 121
            PP D + +L+L                       L+S  +   PP AI EL    V+  
Sbjct: 203 IPPPD-AKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEP 261
Query: 122 ----------------LCRCLLRQNPVERITFKEFFNHRFL 146
                           + +CL++ NP ER   K+   H F+
Sbjct: 262 PPKLPSGVFSLEFQDFVNKCLIK-NPAERADLKQLMVHAFI 301

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + + G+  Y+APE+++  ++ A+  D
Sbjct: 133 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVD 189
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 190 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 246
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 247 ENPSARITIPDIKKDRW 263

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + + G+  Y+APE+++  ++ A+  D
Sbjct: 134 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVD 190
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 191 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 247
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 248 ENPSARITIPDIKKDRW 264

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 26  VLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN--------HKYDAKADLWSVGAIL 77
           V K+ DFG AR L   +   +L G+  Y+ P++ +          KY A  DLWS+G   
Sbjct: 154 VYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213
Query: 78  FQLVTGKPPF 87
           +   TG  PF
Sbjct: 214 YHAATGSLPF 223

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+L+++N V    K+ DFG +R L   P+    T  G  P+ + +PE I   K+ + 
Sbjct: 174 AARNILINSNLVC---KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEELHPD 118
           +D+WS G +L+++++   +P ++ SN     Q+++ + +   R P     P A+ +L  D
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 119 C 119
           C
Sbjct: 286 C 286

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+L+++N V    K+ DFG +R L   P+    T  G  P+ + +PE I   K+ + 
Sbjct: 172 AARNILINSNLVC---KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 228
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEELHPD 118
           +D+WS G +L+++++   +P ++ SN     Q+++ + +   R P     P A+ +L  D
Sbjct: 229 SDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLD 283
Query: 119 C 119
           C
Sbjct: 284 C 284

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-AD 69
           +NLL+   +    LKI DFG A   R    + L + + G+  Y+APE+++  ++ A+  D
Sbjct: 133 ENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVD 189
Query: 70  LWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L  ++ G+ P+D  S+  Q + +         P   I+      + L   +L 
Sbjct: 190 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP---LALLHKILV 246
Query: 129 QNPVERITFKEFFNHRF 145
           +NP  RIT  +    R+
Sbjct: 247 ENPSARITIPDIKKDRW 263

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+L+++N V    K+ DFG +R L   P+    T  G  P+ + +PE I   K+ + 
Sbjct: 174 AARNILINSNLVC---KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEELHPD 118
           +D+WS G +L+++++   +P ++ SN     Q+++ + +   R P     P A+ +L  D
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 119 C 119
           C
Sbjct: 286 C 286

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+L+++N V    K+ DFG +R L   P+    T  G  P+ + +PE I   K+ + 
Sbjct: 174 AARNILINSNLVC---KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEELHPD 118
           +D+WS G +L+++++   +P ++ SN     Q+++ + +   R P     P A+ +L  D
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 119 C 119
           C
Sbjct: 286 C 286

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+L+++N V    K+ DFG +R L   P+    T  G  P+ + +PE I   K+ + 
Sbjct: 174 AARNILINSNLVC---KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEELHPD 118
           +D+WS G +L+++++   +P ++ SN     Q+++ + +   R P     P A+ +L  D
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 119 C 119
           C
Sbjct: 286 C 286

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+L+++N V    K+ DFG +R L   P+    T  G  P+ + +PE I   K+ + 
Sbjct: 174 AARNILINSNLVC---KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEELHPD 118
           +D+WS G +L+++++   +P ++ SN     Q+++ + +   R P     P A+ +L  D
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 119 C 119
           C
Sbjct: 286 C 286

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 40/157 (25%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKP 85
           L++ D+G A    P    +    S  +  PE++ +++ YD   D+WS+G +L  ++  + 
Sbjct: 172 LRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRRE 231
Query: 86  PF----DGSNQLQLFQNILTSTELRFPPGAIEELH------------------------- 116
           PF    D  +QL     +L + EL    G +++ H                         
Sbjct: 232 PFFHGQDNYDQLVRIAKVLGTEELY---GYLKKYHIDLDPHFNDILGQHSRKRWENFIHS 288
Query: 117 -------PDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
                  P+ +DL   LLR +  +R+T KE   H + 
Sbjct: 289 ENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 42/160 (26%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK-- 84
           +K+ DFG +  L    +A++  G+  YM+PE +Q   Y  ++D+WS+G  L ++  G+  
Sbjct: 144 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 85  -PPFDGSNQLQLF------------------QNILTSTEL-RFPPGAIEELHPDCVD--- 121
            PP D      +F                     L+S  +   PP AI EL    V+   
Sbjct: 203 IPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP 262
Query: 122 ---------------LCRCLLRQNPVERITFKEFFNHRFL 146
                          + +CL++ NP ER   K+   H F+
Sbjct: 263 PKLPSGVFSLEFQDFVNKCLIK-NPAERADLKQLMVHAFI 301

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 42/160 (26%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK-- 84
           +K+ DFG +  L    +A++  G+  YM+PE +Q   Y  ++D+WS+G  L ++  G+  
Sbjct: 144 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 85  -PPFDGSNQLQLF------------------QNILTSTEL-RFPPGAIEELHPDCVD--- 121
            PP D      +F                     L+S  +   PP AI EL    V+   
Sbjct: 203 IPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP 262
Query: 122 ---------------LCRCLLRQNPVERITFKEFFNHRFL 146
                          + +CL++ NP ER   K+   H F+
Sbjct: 263 PKLPSGVFSLEFQDFVNKCLIK-NPAERADLKQLMVHAFI 301

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+L+++N V    K+ DFG +R L   P+    T  G  P+ + +PE I   K+ + 
Sbjct: 174 AARNILINSNLVC---KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEELHPD 118
           +D+WS G +L+++++   +P ++ SN     Q+++ + +   R P     P A+ +L  D
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 119 C 119
           C
Sbjct: 286 C 286

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 69/161 (42%), Gaps = 44/161 (27%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK-- 84
           +K+ DFG +  L    +A++  G+  YM+PE +Q   Y  ++D+WS+G  L ++  G+  
Sbjct: 171 IKLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
Query: 85  -PPFDGSNQLQLFQNILTSTEL---------------RF-----PPGAIEELHPDCVD-- 121
            PP D + +L+L        +                +F     PP AI EL    V+  
Sbjct: 230 IPPPD-AKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEP 288
Query: 122 ----------------LCRCLLRQNPVERITFKEFFNHRFL 146
                           + +CL++ NP ER   K+   H F+
Sbjct: 289 PPKLPSGVFSLEFQDFVNKCLIK-NPAERADLKQLMVHAFI 328

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 66/121 (54%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+L+++N V    K+ DFG +R L   P+    T  G  P+ + +PE I   K+ + 
Sbjct: 174 AARNILINSNLVC---KVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEELHPD 118
           +D+WS G +L+++++   +P ++ SN     Q+++ + +   R P     P A+ +L  D
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 119 C 119
           C
Sbjct: 286 C 286

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 65/170 (38%), Gaps = 41/170 (24%)
Query: 23  VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT 82
           + P +K+ DFG A      +   TL  +  Y APE+I    +    D+WS+G IL +   
Sbjct: 172 INPDIKVVDFGSA--TYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 229
Query: 83  G---KPPFDGSNQLQLFQNIL--------------------------TSTELRFPPGAIE 113
           G    P  D    L + + IL                           S+  R+   A +
Sbjct: 230 GFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACK 289
Query: 114 EL----------HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
            L          H    DL + +L  +P +RIT +E   H F   L++++
Sbjct: 290 PLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI 339

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 65/121 (53%), Gaps = 21/121 (17%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT--PQDLADTLCGS-PL-YMAPEIIQNHKYDAK 67
           A +N+L+++N V    K+ DFG  R L   P+    T  G  P+ + +PE I   K+ + 
Sbjct: 174 AARNILINSNLVC---KVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230
Query: 68  ADLWSVGAILFQLVT--GKPPFDGSNQLQLFQNILTSTE--LRFP-----PGAIEELHPD 118
           +D+WS G +L+++++   +P ++ SN     Q+++ + +   R P     P A+ +L  D
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAVDEGYRLPPPMDCPAALYQLMLD 285
Query: 119 C 119
           C
Sbjct: 286 C 286

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 40/157 (25%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKP 85
           L++ D+G A    P    +    S  +  PE++ +++ YD   D+WS+G +L  ++  + 
Sbjct: 177 LRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRRE 236
Query: 86  PF----DGSNQLQLFQNILTSTELRFPPGAIEELH------------------------- 116
           PF    D  +QL     +L + EL    G +++ H                         
Sbjct: 237 PFFHGQDNYDQLVRIAKVLGTEELY---GYLKKYHIDLDPHFNDILGQHSRKRWENFIHS 293
Query: 117 -------PDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
                  P+ +DL   LLR +  +R+T KE   H + 
Sbjct: 294 ENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 148 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSV 203
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 204 ASDVWSFGVVLYELFT 219

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 144 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 200 ASDVWSFGVVLYELFT 215

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 146 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSV 201
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 202 ASDVWSFGVVLYELFT 217

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 144 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 200 ASDVWSFGVVLYELFT 215

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +NLL++T ++   +KIGDFG  R+L   D   +       P  + APE ++   +   
Sbjct: 148 AARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHA 204
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP 108
           +D W  G  L+++ T G+ P+ G N  Q+   I    E R P
Sbjct: 205 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE-RLP 245

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 140 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSV 195
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 196 ASDVWSFGVVLYELFT 211

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +NLL++T ++   +KIGDFG  R+L   D   +       P  + APE ++   +   
Sbjct: 148 AARNLLLATRDL---VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHA 204
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP 108
           +D W  G  L+++ T G+ P+ G N  Q+   I    E R P
Sbjct: 205 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE-RLP 245

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 172 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSV 227
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 228 ASDVWSFGVVLYELFT 243

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 141 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSV 196
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 197 ASDVWSFGVVLYELFT 212

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 26/113 (23%), Positives = 58/113 (51%), Gaps = 8/113 (7%)
Query: 29  IGDFGFARSLTPQDL--ADTLCGSPL-YMAPEIIQNHKYDAKADLWSVGAILFQLVT-GK 84
           + DFG ++ +   D      +   P+ ++A E + +  Y +K+D+W+ G  ++++ T G 
Sbjct: 188 VADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGM 247
Query: 85  PPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF 137
            P+ G    +++  +L    L+ P   ++EL+    ++     R +P++R TF
Sbjct: 248 TPYPGVQNHEMYDYLLHGHRLKQPEDCLDELY----EIMYSCWRTDPLDRPTF 296

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +NLL++T ++   +KIGDFG  R+L   D   +       P  + APE ++   +   
Sbjct: 138 AARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHA 194
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP 108
           +D W  G  L+++ T G+ P+ G N  Q+   I    E R P
Sbjct: 195 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE-RLP 235

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 85/179 (47%), Gaps = 38/179 (21%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFA---------------RSLTPQDLADTLCGSPLYMAPEI 58
           +NLL+S N+ T  +K+ DFG A               R+L  +++  T   +P+Y  PEI
Sbjct: 167 ENLLLS-NQGT--IKLCDFGSATTISHYPDYSWSAQRRALVEEEI--TRNTTPMYRTPEI 221
Query: 59  IQ---NHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEEL 115
           I    N     K D+W++G IL+ L   + PF+   +L+     + + +   PP   +  
Sbjct: 222 IDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-----IVNGKYSIPPHDTQ-- 274
Query: 116 HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSS 174
           +     L R +L+ NP ER++  E  +   L E+     A   +V P++ P+ ELL  +
Sbjct: 275 YTVFHSLIRAMLQVNPEERLSIAEVVHQ--LQEI-----AAARNVNPKS-PITELLEQN 325

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +NLL++T ++   +KIGDFG  R+L   D   +       P  + APE ++   +   
Sbjct: 142 AARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHA 198
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP 108
           +D W  G  L+++ T G+ P+ G N  Q+   I    E R P
Sbjct: 199 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE-RLP 239

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 147 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSV 202
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 203 ASDVWSFGVVLYELFT 218

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 139 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSV 194
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 195 ASDVWSFGVVLYELFT 210

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +NLL++T ++   +KIGDFG  R+L   D   +       P  + APE ++   +   
Sbjct: 138 AARNLLLATRDL---VKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHA 194
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP 108
           +D W  G  L+++ T G+ P+ G N  Q+   I    E R P
Sbjct: 195 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE-RLP 235

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 141 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSV 196
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 197 ASDVWSFGVVLYELFT 212

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +NLL++T ++   +KIGDFG  R+L   D   +       P  + APE ++   +   
Sbjct: 142 AARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHA 198
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP 108
           +D W  G  L+++ T G+ P+ G N  Q+   I    E R P
Sbjct: 199 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE-RLP 239

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 144 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 200 ASDVWSFGVVLYELFT 215

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 9/102 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +NLL++T ++   +KIGDFG  R+L   D   +       P  + APE ++   +   
Sbjct: 138 AARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHA 194
Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP 108
           +D W  G  L+++ T G+ P+ G N  Q+   I    E R P
Sbjct: 195 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGE-RLP 235

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 159 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSV 214
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 215 ASDVWSFGVVLYELFT 230

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 159 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSV 214
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 215 ASDVWSFGVVLYELFT 230

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 145 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEXXKVKEPGESPIFWYAPESLTESKFSV 200
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 201 ASDVWSFGVVLYELFT 216

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 16  LLVSTNEVTPVL-KIGDFGFARSLTPQDLADTLCGSPLYMAPEII--QNHKYDAKADLWS 72
            L S +E  PV  K+ DFG ++          L G+  +MAPE I  +   Y  KAD +S
Sbjct: 156 FLQSLDENAPVCAKVADFGLSQQSVHS--VSGLLGNFQWMAPETIGAEEESYTEKADTYS 213
Query: 73  VGAILFQLVTGKPPFDGSNQLQL-FQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
              IL+ ++TG+ PFD  +  ++ F N++    LR  P   E+  P   ++       +P
Sbjct: 214 FAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR--PTIPEDCPPRLRNVIELCWSGDP 271
Query: 132 VERITF 137
            +R  F
Sbjct: 272 KKRPHF 277

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L++   V    KIGDFG AR +   D    + G+   P+ +MAPE I +  Y  +
Sbjct: 193 AARNVLLTNGHVA---KIGDFGLARDIM-NDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 248
Query: 68  ADLWSVGAILFQLVT-GKPPFDG----SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL 122
           +D+WS G +L+++ + G  P+ G    S   +L ++     +  F P  I  +   C  L
Sbjct: 249 SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 308
Query: 123 CRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQ 157
                   P  R TF++  +  FL E  Q    E+
Sbjct: 309 -------EPTHRPTFQQICS--FLQEQAQEDRRER 334

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 10/126 (7%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPL-YMAPEIIQNHKYDAKADLWS 72
           N+LVS    + + KI DFG AR +   +  A      P+ + APE I    +  K+++WS
Sbjct: 139 NVLVSE---SLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWS 195
Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L+++VT GK P+ G     +   +  S   R P   +E    +  D+ +   ++  
Sbjct: 196 FGILLYEIVTYGKIPYPGRTNADVMSAL--SQGYRMP--RMENCPDELYDIMKMCWKEKA 251
Query: 132 VERITF 137
            ER TF
Sbjct: 252 EERPTF 257

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 45.4 bits (106), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 26  VLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN--------HKYDAKADLWSVGAIL 77
           V K+ DFG AR L   +    L G+  Y+ P++ +          KY A  DLWS+G   
Sbjct: 154 VYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213
Query: 78  FQLVTGKPPF 87
           +   TG  PF
Sbjct: 214 YHAATGSLPF 223

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 27  LKIGDFGFARS---------LTPQDL---ADTL---CGSPLYMAPEIIQ-NHKYDAKADL 70
           +KIGDFG A++         L  Q+L   +D L    G+ +Y+A E++     Y+ K D+
Sbjct: 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDM 214
Query: 71  WSVGAILFQLVTGKPPFD-GSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +S+G I F+++    PF  G  ++ + +  L S  + FPP   +        + R L+  
Sbjct: 215 YSLGIIFFEMIY---PFSTGMERVNILKK-LRSVSIEFPPDFDDNKMKVEKKIIRLLIDH 270
Query: 130 NPVERITFKEFFNHRFL 146
           +P +R   +   N  +L
Sbjct: 271 DPNKRPGARTLLNSGWL 287

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 27  LKIGDFGFARS---------LTPQDL---ADTL---CGSPLYMAPEIIQ-NHKYDAKADL 70
           +KIGDFG A++         L  Q+L   +D L    G+ +Y+A E++     Y+ K D+
Sbjct: 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDM 214
Query: 71  WSVGAILFQLVTGKPPFD-GSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +S+G I F+++    PF  G  ++ + +  L S  + FPP   +        + R L+  
Sbjct: 215 YSLGIIFFEMIY---PFSTGMERVNILKK-LRSVSIEFPPDFDDNKMKVEKKIIRLLIDH 270
Query: 130 NPVERITFKEFFNHRFL 146
           +P +R   +   N  +L
Sbjct: 271 DPNKRPGARTLLNSGWL 287

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L++   V    KIGDFG AR +   D    + G+   P+ +MAPE I +  Y  +
Sbjct: 191 AARNVLLTNGHVA---KIGDFGLARDIM-NDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 246
Query: 68  ADLWSVGAILFQLVT-GKPPFDG----SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL 122
           +D+WS G +L+++ + G  P+ G    S   +L ++     +  F P  I  +   C  L
Sbjct: 247 SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 306
Query: 123 CRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQ 157
                   P  R TF++  +  FL E  Q    E+
Sbjct: 307 -------EPTHRPTFQQICS--FLQEQAQEDRRER 332

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L++   V    KIGDFG AR +   D    + G+   P+ +MAPE I +  Y  +
Sbjct: 191 AARNVLLTNGHVA---KIGDFGLARDIM-NDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 246
Query: 68  ADLWSVGAILFQLVT-GKPPFDG----SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL 122
           +D+WS G +L+++ + G  P+ G    S   +L ++     +  F P  I  +   C  L
Sbjct: 247 SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 306
Query: 123 CRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQ 157
                   P  R TF++  +  FL E  Q    E+
Sbjct: 307 -------EPTHRPTFQQICS--FLQEQAQEDRRER 332

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 3   YVFMIVSA-NACQNLLVSTNEVTP----------VLKIGDFGFARSLTPQDLADTLCGSP 51
           Y++ I+ A + C ++ +   +V P           L++ D+G A    P    +    S 
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 52  LYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPF----DGSNQLQLFQNILTSTEL 105
            +  PE++ +++ YD   D+WS+G +L  ++  K PF    D  +QL     +L + +L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 23/97 (23%)
Query: 27  LKIGDFGFARSLT----------------------PQDLADTLCGSPLYMAPEII-QNHK 63
           +K+ DFG +RS                         Q +      +  Y APEI+  + K
Sbjct: 148 VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTK 207
Query: 64  YDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNIL 100
           Y    D+WS+G IL +++ GKP F GS+ +   + I+
Sbjct: 208 YTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERII 244

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 3   YVFMIVSA-NACQNLLVSTNEVTP----------VLKIGDFGFARSLTPQDLADTLCGSP 51
           Y++ I+ A + C ++ +   +V P           L++ D+G A    P    +    S 
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 52  LYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPF----DGSNQLQLFQNILTSTEL 105
            +  PE++ +++ YD   D+WS+G +L  ++  K PF    D  +QL     +L + +L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L++   V    KIGDFG AR +   D    + G+   P+ +MAPE I +  Y  +
Sbjct: 187 AARNVLLTNGHVA---KIGDFGLARDIM-NDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 242
Query: 68  ADLWSVGAILFQLVT-GKPPFDG----SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL 122
           +D+WS G +L+++ + G  P+ G    S   +L ++     +  F P  I  +   C  L
Sbjct: 243 SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 302
Query: 123 CRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQ 157
                   P  R TF++  +  FL E  Q    E+
Sbjct: 303 -------EPTHRPTFQQICS--FLQEQAQEDRRER 328

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 3   YVFMIVSA-NACQNLLVSTNEVTP----------VLKIGDFGFARSLTPQDLADTLCGSP 51
           Y++ I+ A + C ++ +   +V P           L++ D+G A    P    +    S 
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 52  LYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPF----DGSNQLQLFQNILTSTEL 105
            +  PE++ +++ YD   D+WS+G +L  ++  K PF    D  +QL     +L + +L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 12  ACQNLLV-STNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAK 67
           A +N+LV S N V    KI DFG AR L   +      G  +   +MA E I   K+  +
Sbjct: 144 AARNVLVKSPNHV----KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 199
Query: 68  ADLWSVGAILFQLVT-GKPPFDG 89
           +D+WS G  +++L+T G  P+DG
Sbjct: 200 SDVWSYGVTIWELMTFGGKPYDG 222

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 3   YVFMIVSA-NACQNLLVSTNEVTP----------VLKIGDFGFARSLTPQDLADTLCGSP 51
           Y++ I+ A + C ++ +   +V P           L++ D+G A    P    +    S 
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 52  LYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPF----DGSNQLQLFQNILTSTEL 105
            +  PE++ +++ YD   D+WS+G +L  ++  K PF    D  +QL     +L + +L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 3   YVFMIVSA-NACQNLLVSTNEVTP----------VLKIGDFGFARSLTPQDLADTLCGSP 51
           Y++ I+ A + C ++ +   +V P           L++ D+G A    P    +    S 
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 52  LYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPF----DGSNQLQLFQNILTSTEL 105
            +  PE++ +++ YD   D+WS+G +L  ++  K PF    D  +QL     +L + +L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 3   YVFMIVSA-NACQNLLVSTNEVTP----------VLKIGDFGFARSLTPQDLADTLCGSP 51
           Y++ I+ A + C ++ +   +V P           L++ D+G A    P    +    S 
Sbjct: 134 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 193
Query: 52  LYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPF----DGSNQLQLFQNILTSTEL 105
            +  PE++ +++ YD   D+WS+G +L  ++  K PF    D  +QL     +L + +L
Sbjct: 194 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 252

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 3   YVFMIVSA-NACQNLLVSTNEVTP----------VLKIGDFGFARSLTPQDLADTLCGSP 51
           Y++ I+ A + C ++ +   +V P           L++ D+G A    P    +    S 
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 52  LYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPF----DGSNQLQLFQNILTSTEL 105
            +  PE++ +++ YD   D+WS+G +L  ++  K PF    D  +QL     +L + +L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 3   YVFMIVSA-NACQNLLVSTNEVTP----------VLKIGDFGFARSLTPQDLADTLCGSP 51
           Y++ I+ A + C ++ +   +V P           L++ D+G A    P    +    S 
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 52  LYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPF----DGSNQLQLFQNILTSTEL 105
            +  PE++ +++ YD   D+WS+G +L  ++  K PF    D  +QL     +L + +L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 3   YVFMIVSA-NACQNLLVSTNEVTP----------VLKIGDFGFARSLTPQDLADTLCGSP 51
           Y++ I+ A + C ++ +   +V P           L++ D+G A    P    +    S 
Sbjct: 135 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 52  LYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPF----DGSNQLQLFQNILTSTEL 105
            +  PE++ +++ YD   D+WS+G +L  ++  K PF    D  +QL     +L + +L
Sbjct: 195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 253

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 3   YVFMIVSA-NACQNLLVSTNEVTP----------VLKIGDFGFARSLTPQDLADTLCGSP 51
           Y++ I+ A + C ++ +   +V P           L++ D+G A    P    +    S 
Sbjct: 141 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 200
Query: 52  LYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPF----DGSNQLQLFQNILTSTEL 105
            +  PE++ +++ YD   D+WS+G +L  ++  K PF    D  +QL     +L + +L
Sbjct: 201 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 259

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 41/170 (24%)
Query: 23  VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT 82
           + P +K+ DFG A      +   TL     Y APE+I    +    D+WS+G IL +   
Sbjct: 172 INPDIKVVDFGSA--TYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 229
Query: 83  G---KPPFDGSNQLQLFQNIL--------------------------TSTELRFPPGAIE 113
           G    P  D    L + + IL                           S+  R+   A +
Sbjct: 230 GFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACK 289
Query: 114 EL----------HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
            L          H    DL + +L  +P +RIT +E   H F   L++++
Sbjct: 290 PLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKKSI 339

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 3   YVFMIVSA-NACQNLLVSTNEVTP----------VLKIGDFGFARSLTPQDLADTLCGSP 51
           Y++ I+ A + C ++ +   +V P           L++ D+G A    P    +    S 
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 52  LYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPF----DGSNQLQLFQNILTSTEL 105
            +  PE++ +++ YD   D+WS+G +L  ++  K PF    D  +QL     +L + +L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 3   YVFMIVSA-NACQNLLVSTNEVTP----------VLKIGDFGFARSLTPQDLADTLCGSP 51
           Y++ I+ A + C ++ +   +V P           L++ D+G A    P    +    S 
Sbjct: 135 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 194
Query: 52  LYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPF----DGSNQLQLFQNILTSTEL 105
            +  PE++ +++ YD   D+WS+G +L  ++  K PF    D  +QL     +L + +L
Sbjct: 195 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 253

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLC------GSPLYMAPEIIQNHKYDAKA 68
           N+L+S++     L   DFG A  L P  L  +L       G+  +MAPE++     DAK 
Sbjct: 180 NVLLSSDGSRAALC--DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV 237
Query: 69  DLWSVGAILFQLVTGKPPF 87
           D+WS   ++  ++ G  P+
Sbjct: 238 DIWSSCCMMLHMLNGCHPW 256

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 3   YVFMIVSA-NACQNLLVSTNEVTP----------VLKIGDFGFARSLTPQDLADTLCGSP 51
           Y++ I+ A + C ++ +   +V P           L++ D+G A    P    +    S 
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 52  LYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPF----DGSNQLQLFQNILTSTEL 105
            +  PE++ +++ YD   D+WS+G +L  ++  K PF    D  +QL     +L + +L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 142 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEYYKVKEPGESPIFWYAPESLTESKFSV 197
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 198 ASDVWSFGVVLYELFT 213

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 3   YVFMIVSA-NACQNLLVSTNEVTP----------VLKIGDFGFARSLTPQDLADTLCGSP 51
           Y++ I+ A + C ++ +   +V P           L++ D+G A    P    +    S 
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 52  LYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPF----DGSNQLQLFQNILTSTEL 105
            +  PE++ +++ YD   D+WS+G +L  ++  K PF    D  +QL     +L + +L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLC------GSPLYMAPEIIQNHKYDAKA 68
           N+L+S++     L   DFG A  L P  L  +L       G+  +MAPE++     DAK 
Sbjct: 194 NVLLSSDGSRAALC--DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV 251
Query: 69  DLWSVGAILFQLVTGKPPF 87
           D+WS   ++  ++ G  P+
Sbjct: 252 DIWSSCCMMLHMLNGCHPW 270

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDA-KADLWSVGAILFQLVTGKP 85
           +K+ DFG A  L    L  T CG+  Y APE++  + Y   + ++WS+G  L+ LV  + 
Sbjct: 169 IKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEEN 228
Query: 86  PF 87
           PF
Sbjct: 229 PF 230

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFG   S        T   S  Y APE+I   +Y    D+WS+G IL +L+TG P 
Sbjct: 241 IKVIDFG--SSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298
Query: 87  FDGSNQ 92
             G ++
Sbjct: 299 LPGEDE 304

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLC------GSPLYMAPEIIQNHKYDAKA 68
           N+L+S++     L   DFG A  L P  L  +L       G+  +MAPE++     DAK 
Sbjct: 196 NVLLSSDGSRAALC--DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV 253
Query: 69  DLWSVGAILFQLVTGKPPF 87
           D+WS   ++  ++ G  P+
Sbjct: 254 DIWSSCCMMLHMLNGCHPW 272

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 3   YVFMIVSA-NACQNLLVSTNEVTP----------VLKIGDFGFARSLTPQDLADTLCGSP 51
           Y++ I+ A + C ++ +   +V P           L++ D+G A    P    +    S 
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASR 195
Query: 52  LYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPPF----DGSNQLQLFQNILTSTEL 105
            +  PE++ +++ YD   D+WS+G +L  ++  K PF    D  +QL     +L + +L
Sbjct: 196 YFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 12  ACQNLLV-STNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAK 67
           A +N+LV S N V    KI DFG AR L   +      G  +   +MA E I   K+  +
Sbjct: 167 AARNVLVKSPNHV----KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQ 222
Query: 68  ADLWSVGAILFQLVT-GKPPFDG 89
           +D+WS G  +++L+T G  P+DG
Sbjct: 223 SDVWSYGVTIWELMTFGGKPYDG 245

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFG   S        T   S  Y APE+I   +Y    D+WS+G IL +L+TG P 
Sbjct: 241 IKVIDFG--SSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298
Query: 87  FDGSNQ 92
             G ++
Sbjct: 299 LPGEDE 304

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L++   V    KIGDFG AR +   D    + G+   P+ +MAPE I +  Y  +
Sbjct: 179 AARNVLLTNGHVA---KIGDFGLARDIM-NDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 234
Query: 68  ADLWSVGAILFQLVT-GKPPFDG----SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL 122
           +D+WS G +L+++ + G  P+ G    S   +L ++     +  F P  I  +   C  L
Sbjct: 235 SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 294
Query: 123 CRCLLRQNPVERITFKE 139
                   P  R TF++
Sbjct: 295 -------EPTHRPTFQQ 304

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L++   V    KIGDFG AR +   D    + G+   P+ +MAPE I +  Y  +
Sbjct: 185 AARNVLLTNGHVA---KIGDFGLARDIM-NDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 240
Query: 68  ADLWSVGAILFQLVT-GKPPFDG----SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL 122
           +D+WS G +L+++ + G  P+ G    S   +L ++     +  F P  I  +   C  L
Sbjct: 241 SDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWAL 300
Query: 123 CRCLLRQNPVERITFKE 139
                   P  R TF++
Sbjct: 301 -------EPTHRPTFQQ 310

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 8/126 (6%)
Query: 16  LLVSTNEVTPVL-KIGDFGFARSLTPQDLADTLCGSPLYMAPEII--QNHKYDAKADLWS 72
            L S +E  PV  K+ DFG ++          L G+  +MAPE I  +   Y  KAD +S
Sbjct: 156 FLQSLDENAPVCAKVADFGTSQQSVHS--VSGLLGNFQWMAPETIGAEEESYTEKADTYS 213
Query: 73  VGAILFQLVTGKPPFDGSNQLQL-FQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
              IL+ ++TG+ PFD  +  ++ F N++    LR  P   E+  P   ++       +P
Sbjct: 214 FAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR--PTIPEDCPPRLRNVIELCWSGDP 271
Query: 132 VERITF 137
            +R  F
Sbjct: 272 KKRPHF 277

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV+      V+K+ DFG +R +   +   ++ GS     +  PE++   K+ +K+
Sbjct: 131 AARNCLVNDQ---GVVKVSDFGLSRYVLDDEYTSSV-GSKFPVRWSPPEVLMYSKFSSKS 186
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +++++ + GK P++     +  ++I     L  P  A E+++     +     
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYT----IMYSCW 242
Query: 128 RQNPVERITFK 138
            +   ER TFK
Sbjct: 243 HEKADERPTFK 253

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV+      V+K+ DFG +R +   +   ++ GS     +  PE++   K+ +K+
Sbjct: 138 AARNCLVNDQ---GVVKVSDFGLSRYVLDDEYTSSV-GSKFPVRWSPPEVLMYSKFSSKS 193
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +++++ + GK P++     +  ++I     L  P  A E+++     +     
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYT----IMYSCW 249
Query: 128 RQNPVERITFK 138
            +   ER TFK
Sbjct: 250 HEKADERPTFK 260

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV+      V+K+ DFG +R +   +   ++ GS     +  PE++   K+ +K+
Sbjct: 147 AARNCLVNDQ---GVVKVSDFGLSRYVLDDEYTSSV-GSKFPVRWSPPEVLMYSKFSSKS 202
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +++++ + GK P++     +  ++I     L  P  A E+++     +     
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYT----IMYSCW 258
Query: 128 RQNPVERITFK 138
            +   ER TFK
Sbjct: 259 HEKADERPTFK 269

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV+      V+K+ DFG +R +   +   ++ GS     +  PE++   K+ +K+
Sbjct: 132 AARNCLVNDQ---GVVKVSDFGLSRYVLDDEYTSSV-GSKFPVRWSPPEVLMYSKFSSKS 187
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +++++ + GK P++     +  ++I     L  P  A E+++     +     
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYT----IMYSCW 243
Query: 128 RQNPVERITFK 138
            +   ER TFK
Sbjct: 244 HEKADERPTFK 254

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSP-----LYMAPEIIQNHKYDA 66
           A +N+LV   E    +KIGDFG  + L PQD        P      + APE +   K+  
Sbjct: 141 ATRNILV---ENENRVKIGDFGLTKVL-PQDKEFFKVKEPGESPIFWYAPESLTESKFSV 196
Query: 67  KADLWSVGAILFQLVT 82
            +D+WS G +L++L T
Sbjct: 197 ASDVWSFGVVLYELFT 212

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV+      V+K+ DFG +R +   +   ++ GS     +  PE++   K+ +K+
Sbjct: 127 AARNCLVNDQ---GVVKVSDFGLSRYVLDDEYTSSV-GSKFPVRWSPPEVLMYSKFSSKS 182
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +++++ + GK P++     +  ++I     L  P  A E+++     +     
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYT----IMYSCW 238
Query: 128 RQNPVERITFK 138
            +   ER TFK
Sbjct: 239 HEKADERPTFK 249

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 12/128 (9%)
Query: 16  LLVSTNEVTPVL-KIGDFGFARSLTPQDL--ADTLCGSPLYMAPEII--QNHKYDAKADL 70
            L S +E  PV  K+ DF    SL+ Q +     L G+  +MAPE I  +   Y  KAD 
Sbjct: 156 FLQSLDENAPVCAKVADF----SLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADT 211
Query: 71  WSVGAILFQLVTGKPPFDGSNQLQL-FQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +S   IL+ ++TG+ PFD  +  ++ F N++    LR  P   E+  P   ++       
Sbjct: 212 YSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR--PTIPEDCPPRLRNVIELCWSG 269
Query: 130 NPVERITF 137
           +P +R  F
Sbjct: 270 DPKKRPHF 277

>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex With Staurosporine Length = 287

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+L+         KI DFG +++L   D    A +    PL + APE I   K+ ++
Sbjct: 137 AARNVLLVNRHYA---KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 193
Query: 68  ADLWSVGAILFQ-LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHP---DC 119
           +D+WS G  +++ L  G+ P+      ++   I     +  PP    EL+    DC
Sbjct: 194 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYALMSDC 249

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           ++I D G A   + +    ++ G+  YMAPE++Q    YD+ AD +S+G +LF+L+ G  
Sbjct: 330 VRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 388
Query: 86  PF 87
           PF
Sbjct: 389 PF 390

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 18/83 (21%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-----PQDLAD----------TLCGSPLYMAPEI 58
            N LV  N+   V    DFG AR +      P+ L            T+ G+P +MAPE+
Sbjct: 137 HNCLVRENKNVVV---ADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEM 193
Query: 59  IQNHKYDAKADLWSVGAILFQLV 81
           I    YD K D++S G +L +++
Sbjct: 194 INGRSYDEKVDVFSFGIVLCEII 216

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           ++I D G A   + +    ++ G+  YMAPE++Q    YD+ AD +S+G +LF+L+ G  
Sbjct: 331 VRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
Query: 86  PF 87
           PF
Sbjct: 390 PF 391

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           ++I D G A   + +    ++ G+  YMAPE++Q    YD+ AD +S+G +LF+L+ G  
Sbjct: 331 VRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
Query: 86  PF 87
           PF
Sbjct: 390 PF 391

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKP 85
           ++I D G A   + +    ++ G+  YMAPE++Q    YD+ AD +S+G +LF+L+ G  
Sbjct: 331 VRISDLGLACDFSKKKPHASV-GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389
Query: 86  PF 87
           PF
Sbjct: 390 PF 391

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
            LV T +V    KIGDFG   SL          G+  YM+PE I +  Y  + DL+++G 
Sbjct: 154 FLVDTKQV----KIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGL 209
Query: 76  ILFQLV 81
           IL +L+
Sbjct: 210 ILAELL 215

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+  +V   +KI DFG AR +           + L   +MAPE +    Y  K+
Sbjct: 199 AARNVLVTHGKV---VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKS 255
Query: 69  DLWSVGAILFQLVT-GKPPFDG----SNQLQLFQNILTSTELRFPPGAIEELH 116
           D+WS G +L+++ + G  P+ G    +N  +L QN     +   P  A EE++
Sbjct: 256 DVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQ---PFYATEEIY 305

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
            LV T +V    KIGDFG   SL          G+  YM+PE I +  Y  + DL+++G 
Sbjct: 168 FLVDTKQV----KIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGL 223
Query: 76  ILFQLV 81
           IL +L+
Sbjct: 224 ILAELL 229

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV+      V+K+ DFG +R +   +   ++ GS     +  PE++   K+ +K+
Sbjct: 147 AARNCLVNDQ---GVVKVSDFGLSRYVLDDEETSSV-GSKFPVRWSPPEVLMYSKFSSKS 202
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +++++ + GK P++     +  ++I     L  P  A E+++     +     
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYT----IMYSCW 258
Query: 128 RQNPVERITFK 138
            +   ER TFK
Sbjct: 259 HEKADERPTFK 269

>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70 Length = 613

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 8/110 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+L+         KI DFG +++L   D    A +    PL + APE I   K+ ++
Sbjct: 463 AARNVLLVNRHYA---KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 519
Query: 68  ADLWSVGAILFQ-LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELH 116
           +D+WS G  +++ L  G+ P+      ++   I     +  PP    EL+
Sbjct: 520 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELY 569

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/166 (22%), Positives = 59/166 (35%), Gaps = 41/166 (24%)
Query: 24  TPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           +  +++ DFG A      +   T+  +  Y APE+I    +    D+WS+G I+F+   G
Sbjct: 192 STAVRVVDFGSA--TFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVG 249
Query: 84  KPPF---DGSNQLQLFQNIL----------TSTELRFPPGAIE----------------- 113
              F   D    L + + IL          T  +  F  G ++                 
Sbjct: 250 FTLFQTHDNREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKP 309
Query: 114 ---------ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                    E H    DL   +L   P +R+T  E   H F   LR
Sbjct: 310 LRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFFARLR 355

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 21/138 (15%)
Query: 27  LKIGDFGFARSLTPQDLADTL----CGSPL-YMAPEIIQNHKYDAKADLWSVGAILFQLV 81
           +K+ DFG AR +  ++            P+ + A E +Q +++  K+D+WS G +L++L+
Sbjct: 163 VKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELL 222
Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDCVDLCRCLLRQNPVERITF 137
           T G PP+   +   L   +     L  P   P ++ ++   C +        +P  R TF
Sbjct: 223 TRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLYQVMQQCWE-------ADPAVRPTF 275
Query: 138 KEFFNHRFLGELRQTVHA 155
           +       +GE+ Q V A
Sbjct: 276 RV-----LVGEVEQIVSA 288

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD--TLCGSPLYMAPEIIQNHKYDAKADLW 71
           +N+LVS ++   ++   DFG A + T + L       G+  Y APE         +AD++
Sbjct: 163 ENILVSADDFAYLV---DFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIY 219
Query: 72  SVGAILFQLVTGKPPFDGSNQLQL 95
           ++  +L++ +TG PP+ G +QL +
Sbjct: 220 ALTCVLYECLTGSPPYQG-DQLSV 242

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARS-LTPQDLADTLCGSPL-YMAPEIIQNHKYDAKAD 69
           A +N LV  +     +K+ DFG  R  L  Q ++      P+ + APE+    KY +K+D
Sbjct: 131 AARNCLVDRD---LCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSD 187
Query: 70  LWSVGAILFQLVT-GKPPFD 88
           +W+ G +++++ + GK P+D
Sbjct: 188 VWAFGILMWEVFSLGKMPYD 207

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV+      V+K+ DFG +R +   +   +  GS     +  PE++   K+ +K+
Sbjct: 132 AARNCLVNDQ---GVVKVSDFGLSRYVLDDEYTSSR-GSKFPVRWSPPEVLMYSKFSSKS 187
Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+W+ G +++++ + GK P++     +  ++I     L  P  A E+++     +     
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVYT----IMYSCW 243
Query: 128 RQNPVERITFK 138
            +   ER TFK
Sbjct: 244 HEKADERPTFK 254

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFG A      D   ++  +  Y APE+I N  +D  +D+WS G +L +L TG   
Sbjct: 201 IKLIDFGCAT--FKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLL 258
Query: 87  FDGSNQLQ 94
           F     ++
Sbjct: 259 FRTHEHME 266

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Query: 28  KIGDFGFARS---LTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK 84
           KI DFG AR+            + G+  Y APE ++  +   K+D++S G +L +++TG 
Sbjct: 164 KISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITGL 222
Query: 85  PPFDGSNQLQLF 96
           P  D   + QL 
Sbjct: 223 PAVDEHREPQLL 234

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 8/92 (8%)
Query: 50  SPLYMAPEIIQNHKYDAK---ADLWSVGAILFQLVTGKPPFDGSNQLQLFQNI-LTSTEL 105
           +P ++APE +Q    D     AD+WS   +L++LVT + PF   + +++   + L     
Sbjct: 171 APAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP 230
Query: 106 RFPPGAIEELHPDCVDLCRCLLRQNPVERITF 137
             PPG    + P    L +  + ++P +R  F
Sbjct: 231 TIPPG----ISPHVSKLMKICMNEDPAKRPKF 258

>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain Length = 308

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 14/121 (11%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLVT- 82
           +KI D G  R +   D    L  S L   +MAPE I   K+   +D+WS G +L+++ + 
Sbjct: 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY 243
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
           G  P+ G +   + + I     L  P   P  +  L  +C +       + P  R  FK+
Sbjct: 244 GLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWN-------EFPSRRPRFKD 296
Query: 140 F 140
Sbjct: 297 I 297

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 150 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 206
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 207 DVWSYGVTVWELMTFGSKPYDG 228

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 138 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 194
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 195 DVWSYGVTVWELMTFGSKPYDG 216

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 178 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 234
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 235 DVWSYGVTVWELMTFGSKPYDG 256

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 145 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 201
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 202 DVWSYGVTVWELMTFGSKPYDG 223

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 151 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 207
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 208 DVWSYGVTVWELMTFGSKPYDG 229

>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2 Length = 289

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 53/121 (43%), Gaps = 14/121 (11%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKADLWSVGAILFQLVT- 82
           +KI D G  R +   D    L  S L   +MAPE I   K+   +D+WS G +L+++ + 
Sbjct: 167 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSY 226
Query: 83  GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
           G  P+ G +   + + I     L  P   P  +  L  +C +       + P  R  FK+
Sbjct: 227 GLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWN-------EFPSRRPRFKD 279
Query: 140 F 140
Sbjct: 280 I 280

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 144 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDG 222

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 151 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 207
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 208 DVWSYGVTVWELMTFGSKPYDG 229

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 154 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 210
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 211 DVWSYGVTVWELMTFGSKPYDG 232

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 151 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 207
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 208 DVWSYGVTVWELMTFGSKPYDG 229

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 144 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDG 222

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 145 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 201
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 202 DVWSYGVTVWELMTFGSKPYDG 223

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 41/87 (47%), Gaps = 9/87 (10%)
Query: 28  KIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG-KPP 86
           K+GDFG    L      +   G P YMAPE++Q   Y   AD++S+G  + ++    + P
Sbjct: 197 KLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELP 255
Query: 87  FDGSNQLQLFQNIL-------TSTELR 106
             G    QL Q  L        S+ELR
Sbjct: 256 HGGEGWQQLRQGYLPPEFTAGLSSELR 282

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +K+ DFG   S            S  Y APE+I   +Y    D+WS+G IL +L+TG P 
Sbjct: 241 IKVIDFG--SSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298
Query: 87  FDGSNQ 92
             G ++
Sbjct: 299 LPGEDE 304

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 141 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 197
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 198 DVWSYGVTVWELMTFGSKPYDG 219

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 144 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDG 222

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD-TLCGSPL-YMAPEIIQNHKYDAKAD 69
           A +N+LV++ E    +K+GDFG +R +  +D    ++   P+ +M+PE I   ++   +D
Sbjct: 152 AVRNILVASPEC---VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASD 208
Query: 70  LWSVGAILFQLVT-GKPPF 87
           +W     ++++++ GK PF
Sbjct: 209 VWMFAVCMWEILSFGKQPF 227

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 144 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDG 222

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 146 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 203 DVWSYGVTVWELMTFGSKPYDG 224

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 147 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 204 DVWSYGVTVWELMTFGSKPYDG 225

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLW 71
           A +N+LVS + V    K+ DFG  +  +     DT      + APE ++  K+  K+D+W
Sbjct: 144 AARNVLVSEDNVA---KVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVW 198
Query: 72  SVGAILFQLVT-GKPPF 87
           S G +L+++ + G+ P+
Sbjct: 199 SFGILLWEIYSFGRVPY 215

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 144 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDG 222

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 146 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 202
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 203 DVWSYGVTVWELMTFGSKPYDG 224

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 147 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 204 DVWSYGVTVWELMTFGSKPYDG 225

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 169 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 225
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 226 DVWSYGVTVWELMTFGSKPYDG 247

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD-TLCGSPL-YMAPEIIQNHKYDAKAD 69
           A +N+LV++ E    +K+GDFG +R +  +D    ++   P+ +M+PE I   ++   +D
Sbjct: 140 AVRNILVASPEC---VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASD 196
Query: 70  LWSVGAILFQLVT-GKPPF 87
           +W     ++++++ GK PF
Sbjct: 197 VWMFAVCMWEILSFGKQPF 215

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 148 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 204
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 205 DVWSYGVTVWELMTFGSKPYDG 226

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD-TLCGSPL-YMAPEIIQNHKYDAKAD 69
           A +N+LV++ E    +K+GDFG +R +  +D    ++   P+ +M+PE I   ++   +D
Sbjct: 136 AVRNILVASPEC---VKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASD 192
Query: 70  LWSVGAILFQLVT-GKPPF 87
           +W     ++++++ GK PF
Sbjct: 193 VWMFAVCMWEILSFGKQPF 211

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 147 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 204 DVWSYGVTVWELMTFGSKPYDG 225

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 147 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 203
Query: 69  DLWSVGAILFQLVT-GKPPFDG 89
           D+WS G  +++L+T G  P+DG
Sbjct: 204 DVWSYGVTVWELMTFGSKPYDG 225

>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector Length = 349

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 29  IGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +GDFG A+ +  +D  +   + G+  ++APE +   K   K D++  G +L +L+TG+  
Sbjct: 183 VGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRA 242
Query: 87  FD 88
           FD
Sbjct: 243 FD 244

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLW 71
           A +N+LVS + V    K+ DFG  +  +     DT      + APE ++  K+  K+D+W
Sbjct: 129 AARNVLVSEDNVA---KVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVW 183
Query: 72  SVGAILFQLVT-GKPPF 87
           S G +L+++ + G+ P+
Sbjct: 184 SFGILLWEIYSFGRVPY 200

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLW 71
           A +N+LVS + V    K+ DFG  +  +     DT      + APE ++  K+  K+D+W
Sbjct: 316 AARNVLVSEDNVA---KVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVW 370
Query: 72  SVGAILFQLVT-GKPPF 87
           S G +L+++ + G+ P+
Sbjct: 371 SFGILLWEIYSFGRVPY 387

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	568
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	6e-42
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-40
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	4e-40
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-39
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	2e-39
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	9e-39
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-38
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-38
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	7e-38
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	7e-38
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-35
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-35
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	5e-35
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-35
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	7e-34
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	8e-34
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	1e-33
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-33
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-33
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-33
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	5e-33
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-32
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	2e-32
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-32
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	3e-32
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	3e-32
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	4e-32
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-32
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-32
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	6e-32
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	1e-31
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-31
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-31
3bhy_A	283	Death-associated protein kinase 3; death associate	2e-31
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-31
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	2e-31
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	3e-31
2a19_B	284	Interferon-induced, double-stranded RNA-activated	5e-31
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	5e-31
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-30
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-30
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-30
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-30
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	2e-30
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-30
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-30
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	2e-30
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-30
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	4e-30
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	5e-30
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	7e-30
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-30
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	7e-30
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-29
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-29
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-29
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-29
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-29
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-29
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-29
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	4e-29
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	5e-29
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	5e-29
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	5e-29
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	1e-28
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	3e-28
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	4e-28
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	6e-28
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	6e-28
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	7e-28
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	7e-28
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-27
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	1e-27
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	1e-27
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-27
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-26
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-26
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	4e-26
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-26
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	2e-25
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-25
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-25
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	6e-25
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	8e-25
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	2e-24
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	4e-24
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	7e-24
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	7e-24
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-23
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	2e-23
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	2e-23
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	3e-23
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-23
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	4e-23
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	6e-23
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	6e-23
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	7e-23
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	8e-23
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	1e-22
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-22
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-22
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	5e-21
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	9e-21
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	1e-20
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-20
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	5e-20
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	8e-20
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-19
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	8e-19
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	9e-19
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	1e-18
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	2e-18
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	2e-18
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	2e-18
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	3e-18
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	3e-18
3an0_A	340	Dual specificity mitogen-activated protein kinase;	3e-18
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	5e-18
2dyl_A	318	Dual specificity mitogen-activated protein kinase	6e-18
3aln_A	327	Dual specificity mitogen-activated protein kinase;	6e-18
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-17
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-17
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-17
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-17
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-17
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	2e-17
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	3e-17
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	3e-17
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	3e-17
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	3e-17
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	6e-17
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	7e-17
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	9e-17
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-16
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-16
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-16
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-16
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	2e-16
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-16
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	4e-16
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	4e-16
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	4e-16
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	5e-16
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	5e-16
3niz_A	311	Rhodanese family protein; structural genomics, str	6e-16
3ork_A	311	Serine/threonine protein kinase; structural genomi	8e-16
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	1e-15
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	1e-15
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-15
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	4e-15
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	6e-15
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-14
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	1e-14
3o0g_A	292	Cell division protein kinase 5; kinase activator c	5e-14
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	1e-13
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-13
3q4u_A	301	Activin receptor type-1; structural genomics conso	6e-13
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	9e-13
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	9e-13
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	1e-12
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-12
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	3e-12
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-12
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-12
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	6e-12
3soc_A	322	Activin receptor type-2A; structural genomics cons	6e-12
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	7e-12
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	8e-12
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	9e-12
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	9e-12
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-11
3rp9_A	458	Mitogen-activated protein kinase; structural genom	1e-11
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	1e-11
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	1e-11
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	2e-11
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-11
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-11
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	3e-11
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-11
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	3e-11
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-11
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	3e-11
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-11
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	4e-11
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	5e-11
4aoj_A	329	High affinity nerve growth factor receptor; transf	5e-11
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	6e-11
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	6e-11
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	7e-11
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	8e-11
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	8e-11
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	9e-11
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	9e-11
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	9e-11
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	1e-10
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-10
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	1e-10
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-10
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	2e-10
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	2e-10
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	2e-10
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-10
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-10
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-10
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	3e-10
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	4e-10
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	4e-10
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	5e-10
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-10
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	7e-10
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	8e-10
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-09
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	1e-09
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	2e-09
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-09
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-09
3uqc_A	286	Probable conserved transmembrane protein; structur	2e-09
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-09
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	3e-09
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	4e-09
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	5e-09
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	6e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-06
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	2e-08
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	4e-08
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	5e-08
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	4e-06
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	1e-05
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	1e-05

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  153 bits (388), Expect = 6e-42
 Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 38/219 (17%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL---TPQDLADTLCGSPLYMAPEIIQN--------- 61
            N L+       +LK+ DFG A  +   T   + D+  G+  YM PE I++         
Sbjct: 137 ANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 192

Query: 62  --HKYDAKADLWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTST-ELRFPPGAIEELHP 117
              K   K+D+WS+G IL+ +  GK PF    NQ+     I+    E+ FP         
Sbjct: 193 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI----PEK 248

Query: 118 DCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPE 177
           D  D+ +C L+++P +RI+  E   H ++                +T P+ ++   +T E
Sbjct: 249 DLQDVLKCCLKRDPKQRISIPELLAHPYV--------------QIQTHPVNQMAKGTTEE 294

Query: 178 DRHSLHSEHPTNSSSKNPKSACSSACDKVILNTGDQGNS 216
            ++ L      NS +   K+A +         + +  +S
Sbjct: 295 MKYVLGQLVGLNSPNSILKAAKTLYEHYSGGESHNSSSS 333

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  149 bits (379), Expect = 2e-40
 Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 38/201 (18%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL---TPQDLADTLCGSPLYMAPEIIQN--------- 61
            N L+       +LK+ DFG A  +   T   + D+  G+  YM PE I++         
Sbjct: 184 ANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGK 239

Query: 62  --HKYDAKADLWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTST-ELRFPPGAIEELHP 117
              K   K+D+WS+G IL+ +  GK PF    NQ+     I+    E+ FP         
Sbjct: 240 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI----PEK 295

Query: 118 DCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPE 177
           D  D+ +C L+++P +RI+  E   H ++                +T P+ ++   +T E
Sbjct: 296 DLQDVLKCCLKRDPKQRISIPELLAHPYV--------------QIQTHPVNQMAKGTTEE 341

Query: 178 DRHSLHSEHPTNSSSKNPKSA 198
            ++ L      NS +   K+A
Sbjct: 342 MKYVLGQLVGLNSPNSILKAA 362

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  147 bits (372), Expect = 4e-40
 Identities = 36/174 (20%), Positives = 58/174 (33%), Gaps = 33/174 (18%)

Query: 14  QNLLVSTNE-VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ--------NHKY 64
            N++    E    V K+ DFG AR L   +   +L G+  Y+ P++ +          KY
Sbjct: 141 GNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKY 200

Query: 65  DAKADLWSVGAILFQLVTGKPPFD----GSNQLQLFQNILT------------------- 101
            A  DLWS+G   +   TG  PF          ++   I+T                   
Sbjct: 201 GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPID 260

Query: 102 -STELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVH 154
            S ++         L      +   +L  +  +   F +FF        R   H
Sbjct: 261 WSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRGNSH 314

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  146 bits (370), Expect = 1e-39
 Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 38/180 (21%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL---TPQDLADTLCGSPLYMAPEIIQN--------- 61
            N L+       +LK+ DFG A  +   T   + D+  G+  YM PE I++         
Sbjct: 156 ANFLIVDG----MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGK 211

Query: 62  --HKYDAKADLWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTST-ELRFPPGAIEELHP 117
              K   K+D+WS+G IL+ +  GK PF    NQ+     I+    E+ FP         
Sbjct: 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDI----PEK 267

Query: 118 DCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPE 177
           D  D+ +C L+++P +RI+  E   H ++                +T P+ ++   +T E
Sbjct: 268 DLQDVLKCCLKRDPKQRISIPELLAHPYV--------------QIQTHPVNQMAKGTTEE 313

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  144 bits (365), Expect = 2e-39
 Identities = 42/131 (32%), Positives = 66/131 (50%), Gaps = 9/131 (6%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           NLL+ +      LKI DFG++    P      LCG+  Y+ PE+I+   +D K DLWS+G
Sbjct: 139 NLLLGSAGE---LKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 194

Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
            + ++ + GKPPF+ +   + ++ I    E  FP      +     DL   LL+ NP +R
Sbjct: 195 VLCYEFLVGKPPFEANTYQETYKRIS-RVEFTFPD----FVTEGARDLISRLLKHNPSQR 249

Query: 135 ITFKEFFNHRF 145
              +E   H +
Sbjct: 250 PMLREVLEHPW 260

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  150 bits (379), Expect = 9e-39
 Identities = 38/191 (19%), Positives = 69/191 (36%), Gaps = 19/191 (9%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+++       + KI D G+A+ L   +L     G+  Y+APE+++  KY    D WS 
Sbjct: 150 ENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSF 209

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEE------------------- 114
           G + F+ +TG  PF  + Q   +   +            +                    
Sbjct: 210 GTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGI 269

Query: 115 LHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSS 174
           L        +C+L  +  +R T  +  N      L   +  +  SV+      V     +
Sbjct: 270 LAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLKLLSVMNMVSGRVHTYPVT 329

Query: 175 TPEDRHSLHSE 185
             E+  +L S 
Sbjct: 330 ENENLQNLKSW 340

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  142 bits (361), Expect = 1e-38
 Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 9/131 (6%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           NLL+        LKI DFG++    P     T+CG+  Y+ PE+I+   +D K DLW  G
Sbjct: 144 NLLMGYKGE---LKIADFGWS-VHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAG 199

Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
            + ++ + G PPFD  +  +  + I+ + +L+FPP     L     DL   LLR +P +R
Sbjct: 200 VLCYEFLVGMPPFDSPSHTETHRRIV-NVDLKFPP----FLSDGSKDLISKLLRYHPPQR 254

Query: 135 ITFKEFFNHRF 145
           +  K    H +
Sbjct: 255 LPLKGVMEHPW 265

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  141 bits (358), Expect = 2e-38
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 8/143 (5%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLW 71
             N+ +   +    +K+GDFG AR L      A T  G+P YM+PE +    Y+ K+D+W
Sbjct: 144 PANVFLDGKQN---VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIW 200

Query: 72  SVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
           S+G +L++L    PPF   +Q +L   I      R P         +  ++   +L    
Sbjct: 201 SLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP----YRYSDELNEIITRMLNLKD 256

Query: 132 VERITFKEFFNHRFLGELRQTVH 154
             R + +E   +  + E     H
Sbjct: 257 YHRPSVEEILENPLILEHHHHHH 279

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  142 bits (359), Expect = 7e-38
 Identities = 39/186 (20%), Positives = 77/186 (41%), Gaps = 8/186 (4%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLW 71
            QN+ ++ +     +++GDFG AR L    +LA    G+P Y++PEI +N  Y+ K+D+W
Sbjct: 153 SQNIFLTKDGT---VQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIW 209

Query: 72  SVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
           ++G +L++L T K  F+  +   L   I++ +              D   L   L ++NP
Sbjct: 210 ALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLH----YSYDLRSLVSQLFKRNP 265

Query: 132 VERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSS 191
            +R +        F+ +  +   + Q               S     +     ++  +  
Sbjct: 266 RDRPSVNSILEKGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKRPASGQNSISVM 325

Query: 192 SKNPKS 197
                +
Sbjct: 326 PAQKIT 331

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  141 bits (358), Expect = 7e-38
 Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 9/140 (6%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD-----TLCGSPLYMAPEIIQ--NHKYDA 66
           +N L STN+    +K+ DFG ++     +  +     T  G+P ++APE++   N  Y  
Sbjct: 197 ENFLFSTNKSFE-IKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGP 255

Query: 67  KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           K D WS G +L  L+ G  PF G N       +L   +L F       L P   DL   L
Sbjct: 256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNK-KLCFENPNYNVLSPLARDLLSNL 314

Query: 127 LRQNPVERITFKEFFNHRFL 146
           L +N  ER        H ++
Sbjct: 315 LNRNVDERFDAMRALQHPWI 334

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  136 bits (344), Expect = 2e-35
 Identities = 43/240 (17%), Positives = 73/240 (30%), Gaps = 58/240 (24%)

Query: 14  QNLLVSTNE-VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ--------NHKY 64
            N++    E    V K+ DFG AR L   +   +L G+  Y+ P++ +          KY
Sbjct: 141 GNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKY 200

Query: 65  DAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAI------------ 112
            A  DLWS+G   +   TG  PF      +  + ++       P GAI            
Sbjct: 201 GATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPID 260

Query: 113 ------------EELHPDCVDLCRCLLRQNPVERITFKEFFN------------------ 142
                         L      +   +L  +  +   F +FF                   
Sbjct: 261 WSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRMVIHVFSLQQ 320

Query: 143 ---HRFLGELRQTVHAEQHSVVPETKPMVE----LLNSSTPEDRHSLHSEHPTNSSSKNP 195
              H+       T       V  +TK +      +             ++H   ++ +NP
Sbjct: 321 MTAHKIYIHSYNTATIFHELVYKQTKIISSNQELIYEGRRLVLEPGRLAQHFPKTTEENP 380

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  133 bits (336), Expect = 2e-35
 Identities = 42/132 (31%), Positives = 68/132 (51%), Gaps = 9/132 (6%)

Query: 15  NLLVSTNEVTPVLKIGDFGFA-RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           NLL++ N     +KI DFG A +   P +   TLCG+P Y++PEI     +  ++D+WS+
Sbjct: 142 NLLLTRNMN---IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSL 198

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G + + L+ G+PPFD          ++   +   P      L  +  DL   LLR+NP +
Sbjct: 199 GCMFYTLLIGRPPFDTDTVKNTLNKVV-LADYEMPS----FLSIEAKDLIHQLLRRNPAD 253

Query: 134 RITFKEFFNHRF 145
           R++     +H F
Sbjct: 254 RLSLSSVLDHPF 265

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  132 bits (335), Expect = 5e-35
 Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 9/132 (6%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           NL ++ +     +KIGDFG A  +    +    LCG+P Y+APE++    +  + D+WS+
Sbjct: 145 NLFLNEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 201

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G I++ L+ GKPPF+ S   + +  I    E   P      ++P    L + +L+ +P  
Sbjct: 202 GCIMYTLLVGKPPFETSCLKETYLRIK-KNEYSIPK----HINPVAASLIQKMLQTDPTA 256

Query: 134 RITFKEFFNHRF 145
           R T  E  N  F
Sbjct: 257 RPTINELLNDEF 268

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  133 bits (337), Expect = 5e-35
 Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 9/132 (6%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           NL ++ +     +KIGDFG A  +    +    LCG+P Y+APE++    +  + D+WS+
Sbjct: 171 NLFLNEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSI 227

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G I++ L+ GKPPF+ S   + +  I    E   P      ++P    L + +L+ +P  
Sbjct: 228 GCIMYTLLVGKPPFETSCLKETYLRIK-KNEYSIPK----HINPVAASLIQKMLQTDPTA 282

Query: 134 RITFKEFFNHRF 145
           R T  E  N  F
Sbjct: 283 RPTINELLNDEF 294

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  131 bits (330), Expect = 7e-34
 Identities = 38/150 (25%), Positives = 63/150 (42%), Gaps = 23/150 (15%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK--YDAKADLWS 72
           N+L+  N     +K+ DFG +             G+  +M PE   N      AK D+WS
Sbjct: 182 NILMDKNGR---VKLSDFGES-EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWS 237

Query: 73  VGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFP---------------PGAIEELH 116
           +G  L+ +     PF    + ++LF NI  +  + +P                 +   L 
Sbjct: 238 LGICLYVMFYNVVPFSLKISLVELFNNIR-TKNIEYPLDRNHFLYPLTNKKSTCSNNFLS 296

Query: 117 PDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
            + +D  +  LR+NP ERIT ++   H +L
Sbjct: 297 NEDIDFLKLFLRKNPAERITSEDALKHEWL 326

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  128 bits (325), Expect = 8e-34
 Identities = 41/133 (30%), Positives = 63/133 (47%), Gaps = 9/133 (6%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYD-AKADLWSV 73
           N+L+  +      KI DFG +  ++  +   T CGSP Y APE+I    Y   + D+WS 
Sbjct: 141 NVLLDAHMN---AKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSC 197

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L+ G  PFD  +   LF+ I        P      L+     L   +L+ +P++
Sbjct: 198 GVILYALLCGTLPFDDEHVPTLFKKIR-GGVFYIPE----YLNRSVATLLMHMLQVDPLK 252

Query: 134 RITFKEFFNHRFL 146
           R T K+   H + 
Sbjct: 253 RATIKDIREHEWF 265

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  128 bits (325), Expect = 1e-33
 Identities = 41/137 (29%), Positives = 59/137 (43%), Gaps = 13/137 (9%)

Query: 15  NLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHK-YD-AKAD 69
           NLL++T      LKI   G A         D   T  GSP +  PEI      +   K D
Sbjct: 139 NLLLTTGGT---LKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVD 195

Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +WS G  L+ + TG  PF+G N  +LF+NI        P     +  P   DL + +L  
Sbjct: 196 IWSAGVTLYNITTGLYPFEGDNIYKLFENIG-KGSYAIPG----DCGPPLSDLLKGMLEY 250

Query: 130 NPVERITFKEFFNHRFL 146
            P +R + ++   H + 
Sbjct: 251 EPAKRFSIRQIRQHSWF 267

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  129 bits (327), Expect = 1e-33
 Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 15/181 (8%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYD-AKADLWSV 73
           NLL+  N     +KI DFG +  +T  +   T CGSP Y APE+I    Y   + D+WS 
Sbjct: 138 NLLLDDNLN---VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSC 194

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +L+ ++ G+ PFD      LF+ + +      P      L P    L R ++  +P++
Sbjct: 195 GIVLYVMLVGRLPFDDEFIPNLFKKVNSC-VYVMPD----FLSPGAQSLIRRMIVADPMQ 249

Query: 134 RITFKEFFNHRFL-----GELRQTVHAEQHSVVPE-TKPMVELLNSSTPEDRHSLHSEHP 187
           RIT +E     +        LR     +           + E +  S      +L S+  
Sbjct: 250 RITIQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSEDYIVEALRSDEN 309

Query: 188 T 188
            
Sbjct: 310 N 310

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  127 bits (322), Expect = 3e-33
 Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 10/136 (7%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHK--YD-AKADL 70
           NLLV  +     +KI DFG +      D L     G+P +MAPE +   +  +     D+
Sbjct: 167 NLLVGEDGH---IKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDV 223

Query: 71  WSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           W++G  L+  V G+ PF     + L   I +   L FP     ++  D  DL   +L +N
Sbjct: 224 WAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQ-ALEFPDQ--PDIAEDLKDLITRMLDKN 280

Query: 131 PVERITFKEFFNHRFL 146
           P  RI   E   H ++
Sbjct: 281 PESRIVVPEIKLHPWV 296

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  126 bits (319), Expect = 5e-33
 Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 2/129 (1%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N L  T+     LK+ DFG A    P  +  T  G+P Y++P++++   Y  + D WS G
Sbjct: 136 NFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAG 194

Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
            +++ L+ G PPF      ++   I       FP      + P    L R LL ++P +R
Sbjct: 195 VMMYVLLCGYPPFSAPTDSEVMLKIREG-TFTFPEKDWLNVSPQAESLIRRLLTKSPKQR 253

Query: 135 ITFKEFFNH 143
           IT  +   H
Sbjct: 254 ITSLQALEH 262

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  126 bits (319), Expect = 1e-32
 Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 9/182 (4%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH---KYDAKADLW 71
           N+L+S+ E   ++KI DFG ++ L    L  TLCG+P Y+APE++ +     Y+   D W
Sbjct: 144 NVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 203

Query: 72  SVGAILFQLVTGKPPF-DGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           S+G ILF  ++G PPF +   Q+ L   I +  +  F P    E+    +DL + LL  +
Sbjct: 204 SLGVILFICLSGYPPFSEHRTQVSLKDQITSG-KYNFIPEVWAEVSEKALDLVKKLLVVD 262

Query: 131 PVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVEL--LNSSTPEDRHSLHSEHPT 188
           P  R T +E   H +L +  + +  +   ++ E      L  + +     R         
Sbjct: 263 PKARFTTEEALRHPWLQD--EDMKRKFQDLLSEENESTALPQVLAQPSTSRKRPREGEAE 320

Query: 189 NS 190
            +
Sbjct: 321 GA 322

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  126 bits (319), Expect = 2e-32
 Identities = 49/133 (36%), Positives = 73/133 (54%), Gaps = 9/133 (6%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYD-AKADLWSV 73
           NLL+  +     +KI DFGF+   T     D  CG+P Y APE+ Q  KYD  + D+WS+
Sbjct: 144 NLLLDADMN---IKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSL 200

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ LV+G  PFDG N  +L + +L   + R P      +  DC +L +  L  NP++
Sbjct: 201 GVILYTLVSGSLPFDGQNLKELRERVLRG-KYRIPFY----MSTDCENLLKRFLVLNPIK 255

Query: 134 RITFKEFFNHRFL 146
           R T ++    R++
Sbjct: 256 RGTLEQIMKDRWI 268

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  125 bits (317), Expect = 2e-32
 Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 9/150 (6%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLW 71
             N+ ++   V   +K+GD G  R  + +   A +L G+P YM+PE I  + Y+ K+D+W
Sbjct: 164 PANVFITATGV---VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIW 220

Query: 72  SVGAILFQLVTGKPPFDGS--NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           S+G +L+++   + PF G   N   L + I       +PP   +    +   L    +  
Sbjct: 221 SLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC---DYPPLPSDHYSEELRQLVNMCINP 277

Query: 130 NPVERITFKEFFNHRFLGELRQTVHAEQHS 159
           +P +R      ++             E H 
Sbjct: 278 DPEKRPDVTYVYDVAKRMHACTASSLEHHH 307

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  124 bits (314), Expect = 3e-32
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 1/132 (0%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           NLL+++      +K+ DFG A  +   +      G+P Y++PE+++   Y    D+W+ G
Sbjct: 135 NLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 194

Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
            IL+ L+ G PPF   +Q +L+  I       +P    + + P+   L   +L  NP +R
Sbjct: 195 VILYILLVGYPPFWDEDQHRLYAQIKAG-AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKR 253

Query: 135 ITFKEFFNHRFL 146
           IT  +     ++
Sbjct: 254 ITADQALKVPWI 265

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  127 bits (321), Expect = 3e-32
 Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 7/153 (4%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH---KYDAKADLW 71
           N+L+S+ E   ++KI DFG ++ L    L  TLCG+P Y+APE++ +     Y+   D W
Sbjct: 269 NVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCW 328

Query: 72  SVGAILFQLVTGKPPF-DGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           S+G ILF  ++G PPF +   Q+ L   I +  +  F P    E+    +DL + LL  +
Sbjct: 329 SLGVILFICLSGYPPFSEHRTQVSLKDQITSG-KYNFIPEVWAEVSEKALDLVKKLLVVD 387

Query: 131 PVERITFKEFFNHRFLGELRQTVHAEQHSVVPE 163
           P  R T +E   H +L +  + +  +   ++ E
Sbjct: 388 PKARFTTEEALRHPWLQD--EDMKRKFQDLLSE 418

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  126 bits (318), Expect = 4e-32
 Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 8/157 (5%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYD-AKADLWSV 73
           N L+  +   P LKI DFG+++S        +  G+P Y+APE++   +YD   AD+WS 
Sbjct: 146 NTLLDGSP-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSC 204

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILT---STELRFPPGAIEELHPDCVDLCRCLLRQN 130
           G  L+ ++ G  PF+   + + ++  +    S +   P      + P+C  L   +   +
Sbjct: 205 GVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDI--RISPECCHLISRIFVAD 262

Query: 131 PVERITFKEFFNHR-FLGELRQTVHAEQHSVVPETKP 166
           P  RI+  E   H  FL  L   +  E ++     +P
Sbjct: 263 PATRISIPEIKTHSWFLKNLPADLMNESNTGSQFQEP 299

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  124 bits (313), Expect = 5e-32
 Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 13/134 (9%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N+L         +KI DFG A      + +    G+ LYMAPE+ +      K D+WS G
Sbjct: 154 NILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAG 212

Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCV-----DLCRCLLRQ 129
            +++ L+TG  PF G++  ++ Q      E  +            +     DL + +L +
Sbjct: 213 VVMYFLLTGCLPFTGTSLEEVQQKATYK-EPNYAV------ECRPLTPQAVDLLKQMLTK 265

Query: 130 NPVERITFKEFFNH 143
           +P  R +  +  +H
Sbjct: 266 DPERRPSAAQVLHH 279

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  124 bits (314), Expect = 5e-32
 Identities = 35/135 (25%), Positives = 51/135 (37%), Gaps = 12/135 (8%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
             N+ +         K+GDFG    L      +   G P YMAPE++Q   Y   AD++S
Sbjct: 185 PANIFLGPRGR---CKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFS 240

Query: 73  VGAILFQLVTGKP-PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
           +G  + ++      P  G    QL Q  L      F  G   EL      +   +L  +P
Sbjct: 241 LGLTILEVACNMELPHGGEGWQQLRQGYLPP---EFTAGLSSELR----SVLVMMLEPDP 293

Query: 132 VERITFKEFFNHRFL 146
             R T +       L
Sbjct: 294 KLRATAEALLALPVL 308

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  124 bits (314), Expect = 6e-32
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 14/128 (10%)

Query: 27  LKIGDFGFAR---SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG 83
           ++I DFG A+     + Q  A++  G+  Y++PE++        +DLW++G I++QLV G
Sbjct: 169 IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

Query: 84  KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT------F 137
            PPF   N+  +FQ I+   E  FP        P   DL   LL  +  +R+       +
Sbjct: 229 LPPFRAGNEYLIFQKII-KLEYDFPEK----FFPKARDLVEKLLVLDATKRLGCEEMEGY 283

Query: 138 KEFFNHRF 145
                H F
Sbjct: 284 GPLKAHPF 291

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  123 bits (311), Expect = 1e-31
 Identities = 31/150 (20%), Positives = 65/150 (43%), Gaps = 22/150 (14%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLT---------------PQDLADTLCGSPLYMAPE 57
             N+ +  +     +KIGDFG A+++                  D   +  G+ +Y+A E
Sbjct: 144 PMNIFIDESRN---VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATE 200

Query: 58  IIQNHK-YDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELH 116
           ++     Y+ K D++S+G I F+++   P   G  ++ + + + +   + FPP   +   
Sbjct: 201 VLDGTGHYNEKIDMYSLGIIFFEMIY--PFSTGMERVNILKKLRSV-SIEFPPDFDDNKM 257

Query: 117 PDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
                + R L+  +P +R   +   N  +L
Sbjct: 258 KVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  123 bits (312), Expect = 1e-31
 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 1/131 (0%)

Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +K+ DFG A  +        + G+P ++APEI+       +AD+WS+G 
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206

Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   NI +     F             D  R LL +   +R+
Sbjct: 207 ITYILLSGASPFLGDTKQETLANITSV-SYDFDEEFFSHTSELAKDFIRKLLVKETRKRL 265

Query: 136 TFKEFFNHRFL 146
           T +E   H ++
Sbjct: 266 TIQEALRHPWI 276

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  122 bits (309), Expect = 2e-31
 Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 2/129 (1%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N+L+ + E    +KI DFG +             G+  Y+APE+++   YD K D+WS G
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAG 209

Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
            IL+ L++G PPF G N+  + + + T  +  F       +  D  DL R +L  +P  R
Sbjct: 210 VILYILLSGTPPFYGKNEYDILKRVETG-KYAFDLPQWRTISDDAKDLIRKMLTFHPSLR 268

Query: 135 ITFKEFFNH 143
           IT  +   H
Sbjct: 269 ITATQCLEH 277

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  122 bits (308), Expect = 2e-31
 Identities = 36/128 (28%), Positives = 59/128 (46%), Gaps = 1/128 (0%)

Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +K+ DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 140 MLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 199

Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   NI       F             D  R LL ++P  R+
Sbjct: 200 ITYILLSGASPFLGETKQETLTNISAV-NYDFDEEYFSNTSELAKDFIRRLLVKDPKRRM 258

Query: 136 TFKEFFNH 143
           T  +   H
Sbjct: 259 TIAQSLEH 266

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  126 bits (318), Expect = 2e-31
 Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 16/183 (8%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYD-AKADLWSV 73
           N+L+  +      KI DFG +  ++  +   T CGSP Y APE+I    Y   + D+WS 
Sbjct: 146 NVLLDAHMN---AKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSS 202

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L+ G  PFD  +   LF+ I        P      L+P  + L + +L+ +P++
Sbjct: 203 GVILYALLCGTLPFDDDHVPTLFKKICDG-IFYTPQ----YLNPSVISLLKHMLQVDPMK 257

Query: 134 RITFKEFFNHR-FLGELRQTVHAEQHSVVPET------KPMVELLNSSTPEDRHSLHSEH 186
           R T K+   H  F  +L + +  E  S           K + E    S  E    L++ +
Sbjct: 258 RATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLYNRN 317

Query: 187 PTN 189
             +
Sbjct: 318 HQD 320

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  123 bits (310), Expect = 2e-31
 Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 1/128 (0%)

Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 146 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 205

Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+       F             D  R LL ++P +R+
Sbjct: 206 ITYILLSGASPFLGDTKQETLANVSAV-NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 264

Query: 136 TFKEFFNH 143
           T ++   H
Sbjct: 265 TIQDSLQH 272

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  122 bits (309), Expect = 3e-31
 Identities = 37/183 (20%), Positives = 74/183 (40%), Gaps = 15/183 (8%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYD-AKADLWSV 73
           N++++ +     +K+ DFG A  L    L  T CG+  Y APE++  + Y   + ++WS+
Sbjct: 160 NIVIAEDFT---IKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSL 216

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G  L+ LV  + PF         +  +    +  P      +  + + L   LL+  P  
Sbjct: 217 GVTLYTLVFEENPFCE------LEETV-EAAIHPPY----LVSKELMSLVSGLLQPVPER 265

Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSK 193
           R T ++     ++ +           V    KP   +L++++ E  +   S+        
Sbjct: 266 RTTLEKLVTDPWVTQPVNLADYTWEEVFRVNKPESGVLSAASLEMGNRSLSDVAQAQELC 325

Query: 194 NPK 196
             +
Sbjct: 326 GGE 328

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  121 bits (305), Expect = 5e-31
 Identities = 33/148 (22%), Positives = 59/148 (39%), Gaps = 15/148 (10%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
             N+ +   +    +KIGDFG   SL          G+  YM+PE I +  Y  + DL++
Sbjct: 150 PSNIFLVDTKQ---VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYA 206

Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
           +G IL +L+      F+ S     F ++    +        ++       L + LL + P
Sbjct: 207 LGLILAELLHVCDTAFETSK---FFTDL---RDGIISDIFDKKEK----TLLQKLLSKKP 256

Query: 132 VERITFKEFFNHRFLGELRQTVHAEQHS 159
            +R    E      +   +     E+H+
Sbjct: 257 EDRPNTSEILRTLTV-WKKSPEKNERHT 283

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  125 bits (315), Expect = 5e-31
 Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 2/129 (1%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N+L+ + E    +KI DFG +             G+  Y+APE+++   YD K D+WS G
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAG 209

Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
            IL+ L++G PPF G N+  + + + T  +  F       +  D  DL R +L  +P  R
Sbjct: 210 VILYILLSGTPPFYGKNEYDILKRVETG-KYAFDLPQWRTISDDAKDLIRKMLTFHPSLR 268

Query: 135 ITFKEFFNH 143
           IT  +   H
Sbjct: 269 ITATQCLEH 277

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  122 bits (308), Expect = 1e-30
 Identities = 36/132 (27%), Positives = 65/132 (49%), Gaps = 1/132 (0%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           NLL+++      +K+ DFG A  +   +      G+P Y++PE+++   Y    D+W+ G
Sbjct: 158 NLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 217

Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
            IL+ L+ G PPF   +Q +L+  I       +P    + + P+   L   +L  NP +R
Sbjct: 218 VILYILLVGYPPFWDEDQHRLYAQIKAG-AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKR 276

Query: 135 ITFKEFFNHRFL 146
           IT  +     ++
Sbjct: 277 ITADQALKVPWI 288

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  121 bits (305), Expect = 1e-30
 Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 3/154 (1%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QN+L+S+      +KI DFG +R +        + G+P Y+APEI+         D+W++
Sbjct: 160 QNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNI 219

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G I + L+T   PF G +  + + NI     + +       +     D  + LL +NP +
Sbjct: 220 GIIAYMLLTHTSPFVGEDNQETYLNISQV-NVDYSEETFSSVSQLATDFIQSLLVKNPEK 278

Query: 134 RITFKEFFNHRFL--GELRQTVHAEQHSVVPETK 165
           R T +   +H +L   +     H E+ S   +T+
Sbjct: 279 RPTAEICLSHSWLQQWDFENLFHPEETSSSSQTQ 312

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  122 bits (307), Expect = 1e-30
 Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 1/131 (0%)

Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +K+ DFG A  +        + G+P ++APEI+       +AD+WS+G 
Sbjct: 147 MLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 206

Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   NI       F      +      D  R LL +   +R+
Sbjct: 207 ITYILLSGASPFLGDTKQETLANITAV-SYDFDEEFFSQTSELAKDFIRKLLVKETRKRL 265

Query: 136 TFKEFFNHRFL 146
           T +E   H ++
Sbjct: 266 TIQEALRHPWI 276

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  121 bits (305), Expect = 1e-30
 Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 4/132 (3%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           NLL ++ E   VLK+ DFGFA+  T   L  T C +P Y+APE++   KYD   D+WS+G
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFAKETTQNALQ-TPCYTPYYVAPEVLGPEKYDKSCDMWSLG 216

Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTST---ELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            I++ L+ G PPF  +    +   +       +  FP     E+  D   L R LL+ +P
Sbjct: 217 VIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDP 276

Query: 132 VERITFKEFFNH 143
            ER+T  +F NH
Sbjct: 277 TERLTITQFMNH 288

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  120 bits (303), Expect = 2e-30
 Identities = 44/163 (26%), Positives = 66/163 (40%), Gaps = 20/163 (12%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYD-AKADLWSV 73
           N+L+         K+ DFG   +L   +      G+ +Y  PE I  H+Y    A +WS+
Sbjct: 169 NILIDLR--RGCAKLIDFGSG-ALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSL 225

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +L+ +V G  PF+   +      IL + EL FP      + PDC  L R  L   P  
Sbjct: 226 GILLYDMVCGDIPFERDQE------ILEA-ELHFPAH----VSPDCCALIRRCLAPKPSS 274

Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTP 176
           R + +E     ++        AE   + P       L  S  P
Sbjct: 275 RPSLEEILLDPWM-----QTPAEDVPLNPSKGGPAPLAWSLLP 312

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  120 bits (303), Expect = 2e-30
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 15/133 (11%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDA-KADLWSV 73
           N+L+  N     LK+ DFG   +L    +     G+ +Y  PE I+ H+Y    A +WS+
Sbjct: 179 NILIDLNRGE--LKLIDFGSG-ALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSL 235

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +L+ +V G  PF+   +      I+   ++ F       +  +C  L R  L   P +
Sbjct: 236 GILLYDMVCGDIPFEHDEE------IIRG-QVFFRQR----VSSECQHLIRWCLALRPSD 284

Query: 134 RITFKEFFNHRFL 146
           R TF+E  NH ++
Sbjct: 285 RPTFEEIQNHPWM 297

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  123 bits (311), Expect = 2e-30
 Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 2/129 (1%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           NLL+ +      ++I DFG +             G+  Y+APE++    YD K D+WS G
Sbjct: 156 NLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTG 214

Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
            IL+ L++G PPF+G+N+  + + +    +  F     +++     DL R +L   P  R
Sbjct: 215 VILYILLSGCPPFNGANEYDILKKVEKG-KYTFELPQWKKVSESAKDLIRKMLTYVPSMR 273

Query: 135 ITFKEFFNH 143
           I+ ++  +H
Sbjct: 274 ISARDALDH 282

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  120 bits (304), Expect = 2e-30
 Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 3/133 (2%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
            +L+++ E +  +K+G FG A  L     +A    G+P +MAPE+++   Y    D+W  
Sbjct: 160 CVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGC 219

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G ILF L++G  PF G+ + +LF+ I+   + +  P     +     DL R +L  +P E
Sbjct: 220 GVILFILLSGCLPFYGTKE-RLFEGII-KGKYKMNPRQWSHISESAKDLVRRMLMLDPAE 277

Query: 134 RITFKEFFNHRFL 146
           RIT  E  NH +L
Sbjct: 278 RITVYEALNHPWL 290

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  123 bits (310), Expect = 3e-30
 Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 2/129 (1%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           NLL+ + E   ++KI DFG +     Q       G+  Y+APE+++  KYD K D+WS+G
Sbjct: 166 NLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIG 224

Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
            ILF L+ G PPF G    ++ + +    +  F     + +     DL + +L+ +   R
Sbjct: 225 VILFILLAGYPPFGGQTDQEILRKVEKG-KYTFDSPEWKNVSEGAKDLIKQMLQFDSQRR 283

Query: 135 ITFKEFFNH 143
           I+ ++   H
Sbjct: 284 ISAQQALEH 292

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  119 bits (301), Expect = 4e-30
 Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 15/188 (7%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYD-AKADL 70
           NLL+        LKI DFG A      +   L + +CG+  Y+APE+++  ++     D+
Sbjct: 135 NLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191

Query: 71  WSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           WS G +L  ++ G+ P+D  S+  Q + +     +    P   +++    + L   +L +
Sbjct: 192 WSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK-KTYLNP--WKKIDSAPLALLHKILVE 248

Query: 130 NPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTN 189
           NP  RIT  +    R+     + +          +  + E  +  +   + +L    P N
Sbjct: 249 NPSARITIPDIKKDRW---YNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFS-PVN 304

Query: 190 SSSKNPKS 197
           S+S+ P S
Sbjct: 305 SASRTPGS 312

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  122 bits (309), Expect = 5e-30
 Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 2/141 (1%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N+L+        +KI DFG +   +         G+  Y+APE+++  KY+ K D+WS G
Sbjct: 176 NILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCG 234

Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
            I++ L+ G PPF G N   + + +    +  F     + +  +  +L + +L  +  +R
Sbjct: 235 VIMYILLCGYPPFGGQNDQDIIKKVEKG-KYYFDFNDWKNISDEAKELIKLMLTYDYNKR 293

Query: 135 ITFKEFFNHRFLGELRQTVHA 155
            T +E  N R++ +    ++ 
Sbjct: 294 CTAEEALNSRWIKKYANNINK 314

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  118 bits (298), Expect = 7e-30
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 2/151 (1%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           NLL  T E    + I DFG ++      ++ T CG+P Y+APE++    Y    D WS+G
Sbjct: 136 NLLYLTPEENSKIMITDFGLSKMEQNGIMS-TACGTPGYVAPEVLAQKPYSKAVDCWSIG 194

Query: 75  AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
            I + L+ G PPF    + +LF+ I       F     +++     D    LL ++P ER
Sbjct: 195 VITYILLCGYPPFYEETESKLFEKIKEG-YYEFESPFWDDISESAKDFICHLLEKDPNER 253

Query: 135 ITFKEFFNHRFLGELRQTVHAEQHSVVPETK 165
            T ++  +H ++            SV  + +
Sbjct: 254 YTCEKALSHPWIDGNTALHRDIYPSVSLQIQ 284

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  117 bits (296), Expect = 7e-30
 Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 11/136 (8%)

Query: 15  NLLVSTNEVTPVLKIGDFGFA---RSLTPQDLADTLCGSPLYMAPEIIQNHKYD-AKADL 70
           NLL+        LKI DFG A   R    + L + +CG+  Y+APE+++  ++     D+
Sbjct: 135 NLLLDER---DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDV 191

Query: 71  WSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           WS G +L  ++ G+ P+D  S+  Q + +     +    P   +++    + L   +L +
Sbjct: 192 WSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK-KTYLNP--WKKIDSAPLALLHKILVE 248

Query: 130 NPVERITFKEFFNHRF 145
           NP  RIT  +    R+
Sbjct: 249 NPSARITIPDIKKDRW 264

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  118 bits (299), Expect = 7e-30
 Identities = 42/124 (33%), Positives = 71/124 (57%), Gaps = 12/124 (9%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +KI DFGFA+ +   D+  TLCG+P Y+APE++    Y+   D WS G ++++++ G  P
Sbjct: 145 IKITDFGFAKYVP--DVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTP 202

Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFF 141
           F  SN ++ ++ IL + ELRFPP      + D  DL   L+ ++  +R+       ++  
Sbjct: 203 FYDSNTMKTYEKILNA-ELRFPPF----FNEDVKDLLSRLITRDLSQRLGNLQNGTEDVK 257

Query: 142 NHRF 145
           NH +
Sbjct: 258 NHPW 261

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  119 bits (301), Expect = 1e-29
 Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 2/148 (1%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N++  T + +  +KI DFG A  L P ++      +  + APEI+         D+W++
Sbjct: 178 ENIMCETKKASS-VKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAI 236

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G + + L++G  PF G + L+  QN+    +  F   A   + P+  D  + LL++ P +
Sbjct: 237 GVLGYVLLSGLSPFAGEDDLETLQNVKRC-DWEFDEDAFSSVSPEAKDFIKNLLQKEPRK 295

Query: 134 RITFKEFFNHRFLGELRQTVHAEQHSVV 161
           R+T  +   H +L      + +   S  
Sbjct: 296 RLTVHDALEHPWLKGDHSNLTSRIPSSR 323

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  118 bits (299), Expect = 1e-29
 Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 12/124 (9%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +++ DFGFA+ +  +    TLCG+P  +APEII +  Y+   D W++G +++++  G PP
Sbjct: 180 IQVTDFGFAKRV--KGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237

Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFF 141
           F     +Q+++ I+ S ++RFP         D  DL R LL+ +  +R         +  
Sbjct: 238 FFADQPIQIYEKIV-SGKVRFPSH----FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIK 292

Query: 142 NHRF 145
           NH++
Sbjct: 293 NHKW 296

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  117 bits (296), Expect = 1e-29
 Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 10/138 (7%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH------KYDAKA 68
           N+L+  +     +K+ DFGF+  L P +    +CG+P Y+APEII+         Y  + 
Sbjct: 154 NILLDDD---MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV 210

Query: 69  DLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           D+WS G I++ L+ G PPF    Q+ + + I++    +F     ++      DL    L 
Sbjct: 211 DMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSG-NYQFGSPEWDDYSDTVKDLVSRFLV 269

Query: 129 QNPVERITFKEFFNHRFL 146
             P +R T +E   H F 
Sbjct: 270 VQPQKRYTAEEALAHPFF 287

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  118 bits (297), Expect = 1e-29
 Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 2/146 (1%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N++  T   +  +KI +FG AR L P D    L  +P Y APE+ Q+       D+WS+
Sbjct: 131 ENIIYQTRRSST-IKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSL 189

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++ L++G  PF      Q+ +NI+ + E  F   A +E+  + +D    LL +    
Sbjct: 190 GTLVYVLLSGINPFLAETNQQIIENIMNA-EYTFDEEAFKEISIEAMDFVDRLLVKERKS 248

Query: 134 RITFKEFFNHRFLGELRQTVHAEQHS 159
           R+T  E   H +L +  + V  +   
Sbjct: 249 RMTASEALQHPWLKQKIERVSTKVIR 274

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  117 bits (296), Expect = 2e-29
 Identities = 41/125 (32%), Positives = 64/125 (51%), Gaps = 11/125 (8%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG  + S+    +  T CG+  YMAPEI+    ++   D WS+GA+++ ++TG P
Sbjct: 160 VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF G N+ +    IL   +L  PP     L  +  DL + LL++N   R+        E 
Sbjct: 220 PFTGENRKKTIDKILKC-KLNLPPY----LTQEARDLLKKLLKRNAASRLGAGPGDAGEV 274

Query: 141 FNHRF 145
             H F
Sbjct: 275 QAHPF 279

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  117 bits (295), Expect = 2e-29
 Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 11/125 (8%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ DFG ++ S+  +  A + CG+  YMAPE++    +   AD WS G ++F+++TG  
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF G ++ +    IL + +L  P      L P+   L R L ++NP  R+       +E 
Sbjct: 225 PFQGKDRKETMTMILKA-KLGMPQF----LSPEAQSLLRMLFKRNPANRLGAGPDGVEEI 279

Query: 141 FNHRF 145
             H F
Sbjct: 280 KRHSF 284

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  119 bits (299), Expect = 3e-29
 Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 5/133 (3%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           NLL ++     +LK+ DFGFA+  T  +   T C +P Y+APE++   KYD   D+WS+G
Sbjct: 191 NLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLG 250

Query: 75  AILFQLVTGKPPFDGSN----QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
            I++ L+ G PPF  ++       +   I    +  FP     E+  +   L R LL+  
Sbjct: 251 VIMYILLCGYPPFYSNHGLAISPGMKTRIRMG-QYEFPNPEWSEVSEEVKMLIRNLLKTE 309

Query: 131 PVERITFKEFFNH 143
           P +R+T  EF NH
Sbjct: 310 PTQRMTITEFMNH 322

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  117 bits (295), Expect = 4e-29
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 5/135 (3%)

Query: 16  LLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           L V  +     ++I DFGFA+ L     L  T C +  ++APE+++   YDA  D+WS+G
Sbjct: 148 LYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLG 207

Query: 75  AILFQLVTGKPPFDGS---NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            +L+ ++TG  PF         ++   I +  +     G    +     DL   +L  +P
Sbjct: 208 VLLYTMLTGYTPFANGPDDTPEEILARIGSG-KFSLSGGYWNSVSDTAKDLVSKMLHVDP 266

Query: 132 VERITFKEFFNHRFL 146
            +R+T      H ++
Sbjct: 267 HQRLTAALVLRHPWI 281

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  117 bits (295), Expect = 5e-29
 Identities = 18/153 (11%), Positives = 39/153 (25%), Gaps = 26/153 (16%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH----------- 62
            ++++        + +  F                 S  +  PE+               
Sbjct: 235 VDIVLDQRGG---VFLTGFEHLV---RDGARVVSSVSRGFEPPELEARRATISYHRDRRT 288

Query: 63  KYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL 122
                 D W++G +++ +     P      L   + I   +    P             L
Sbjct: 289 LMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIF-RSCKNIP--------QPVRAL 339

Query: 123 CRCLLRQNPVERITFKEFFNHRFLGELRQTVHA 155
               LR    +R+   +        +LR  + A
Sbjct: 340 LEGFLRYPKEDRLLPLQAMETPEYEQLRTELSA 372

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  117 bits (296), Expect = 5e-29
 Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 12/130 (9%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK---YDAKADLWSVGAILFQLVTG 83
           + I DF  A  L  +    T+ G+  YMAPE+  + K   Y    D WS+G   ++L+ G
Sbjct: 154 VHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213

Query: 84  KPPFDG---SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-TFKE 139
           + P+     ++  ++     T+  + +P         + V L + LL  NP +R     +
Sbjct: 214 RRPYHIRSSTSSKEIVHTFETT-VVTYPSA----WSQEMVSLLKKLLEPNPDQRFSQLSD 268

Query: 140 FFNHRFLGEL 149
             N  ++ ++
Sbjct: 269 VQNFPYMNDI 278

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  116 bits (293), Expect = 5e-29
 Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 9/140 (6%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           NLL +       +KI DFGFAR   P +    T C +  Y APE++  + YD   DLWS+
Sbjct: 136 NLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSL 195

Query: 74  GAILFQLVTGKPPFDGSNQ-------LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           G IL+ +++G+ PF   ++       +++ + I    +  F   A + +  +  DL + L
Sbjct: 196 GVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG-DFSFEGEAWKNVSQEAKDLIQGL 254

Query: 127 LRQNPVERITFKEFFNHRFL 146
           L  +P +R+       + +L
Sbjct: 255 LTVDPNKRLKMSGLRYNEWL 274

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  116 bits (293), Expect = 1e-28
 Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 10/123 (8%)

Query: 28  KIGDFGFA-RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
            + DFG    ++       T CG+P Y+APE++    YD   D W +GA+L++++ G PP
Sbjct: 179 VLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPP 238

Query: 87  FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI----TFKEFFN 142
           F   N  +++ NIL    L+  P     +      L   LL+++  +R+     F E  +
Sbjct: 239 FYSRNTAEMYDNILNK-PLQLKPN----ITNSARHLLEGLLQKDRTKRLGAKDDFMEIKS 293

Query: 143 HRF 145
           H F
Sbjct: 294 HVF 296

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  115 bits (290), Expect = 3e-28
 Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 2/133 (1%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+L    +    +KI DFG AR   P++      G+P ++APE++         D+WSV
Sbjct: 216 ENILCVNRDAKQ-IKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSV 274

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G I + L++G  PF G N  +   NIL            +++  +  +    LL +    
Sbjct: 275 GVIAYMLLSGLSPFLGDNDAETLNNILAC-RWDLEDEEFQDISEEAKEFISKLLIKEKSW 333

Query: 134 RITFKEFFNHRFL 146
           RI+  E   H +L
Sbjct: 334 RISASEALKHPWL 346

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  114 bits (287), Expect = 4e-28
 Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 11/125 (8%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  ++      T CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 144 IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 203

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 204 PFYNQDHERLFELILME-EIRFPRT----LSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 258

Query: 141 FNHRF 145
             HRF
Sbjct: 259 MEHRF 263

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  115 bits (291), Expect = 6e-28
 Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 2/133 (1%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           NLL+++      +K+ DFG A  +   Q       G+P Y++PE+++   Y    DLW+ 
Sbjct: 140 NLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWAC 199

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL+ L+ G PPF   +Q +L+Q I       FP    + + P+  DL   +L  NP +
Sbjct: 200 GVILYILLVGYPPFWDEDQHRLYQQIKAG-AYDFPSPEWDTVTPEAKDLINKMLTINPSK 258

Query: 134 RITFKEFFNHRFL 146
           RIT  E   H ++
Sbjct: 259 RITAAEALKHPWI 271

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  114 bits (287), Expect = 6e-28
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 10/138 (7%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ------NHKYDAKA 68
           N+L+  N     +++ DFGF+  L P +    LCG+P Y+APEI++      +  Y  + 
Sbjct: 230 NILLDDNMQ---IRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEV 286

Query: 69  DLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           DLW+ G ILF L+ G PPF    Q+ + + I+   + +F     ++      DL   LL+
Sbjct: 287 DLWACGVILFTLLAGSPPFWHRRQILMLRMIMEG-QYQFSSPEWDDRSSTVKDLISRLLQ 345

Query: 129 QNPVERITFKEFFNHRFL 146
            +P  R+T ++   H F 
Sbjct: 346 VDPEARLTAEQALQHPFF 363

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  113 bits (286), Expect = 7e-28
 Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 12/124 (9%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  + ++      +T CG+P Y+APEI+   KY+   D WS G +L++++ G+ 
Sbjct: 157 IKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 216

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE------ 139
           PF G ++ +LF +I       +P      L  +  DL   L  + P +R+  +       
Sbjct: 217 PFHGQDEEELFHSIRMD-NPFYPRW----LEKEAKDLLVKLFVREPEKRLGVRGDIRQHP 271

Query: 140 FFNH 143
            F  
Sbjct: 272 LFRE 275

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  113 bits (286), Expect = 7e-28
 Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 2/130 (1%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           NLL +T      LKI DFG ++ +  Q L  T+CG+P Y APEI++   Y  + D+WSVG
Sbjct: 178 NLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVG 237

Query: 75  AILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
            I + L+ G  PF        +F+ IL   E  F     +E+  +  DL R L+  +P +
Sbjct: 238 IITYILLCGFEPFYDERGDQFMFRRILNC-EYYFISPWWDEVSLNAKDLVRKLIVLDPKK 296

Query: 134 RITFKEFFNH 143
           R+T  +   H
Sbjct: 297 RLTTFQALQH 306

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  116 bits (292), Expect = 1e-27
 Identities = 36/133 (27%), Positives = 61/133 (45%), Gaps = 2/133 (1%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N++ +T      LK+ DFG    L P+       G+  + APE+ +        D+WSV
Sbjct: 284 ENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSV 342

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G + + L++G  PF G N  +  +N+ +  +      A   +  D  D  R LL  +P  
Sbjct: 343 GVLSYILLSGLSPFGGENDDETLRNVKSC-DWNMDDSAFSGISEDGKDFIRKLLLADPNT 401

Query: 134 RITFKEFFNHRFL 146
           R+T  +   H +L
Sbjct: 402 RMTIHQALEHPWL 414

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  113 bits (285), Expect = 1e-27
 Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 6/109 (5%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
            K+ DFG  +  +       T CG+P Y+APEI+Q   Y    D W++G +L++++ G  
Sbjct: 163 CKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHA 222

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
           PF+  N+  LF+ IL   E+ +P      LH D   + +  + +NP  R
Sbjct: 223 PFEAENEDDLFEAILND-EVVYPT----WLHEDATGILKSFMTKNPTMR 266

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  114 bits (288), Expect = 1e-27
 Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 11/125 (8%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  +  +       T CG+P Y+APE+++++ Y    D W +G ++++++ G+ 
Sbjct: 288 IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRL 347

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P +R+       KE 
Sbjct: 348 PFYNQDHEKLFELILME-EIRFPRT----LGPEAKSLLSGLLKKDPKQRLGGGSEDAKEI 402

Query: 141 FNHRF 145
             HRF
Sbjct: 403 MQHRF 407

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  113 bits (284), Expect = 1e-27
 Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 11/125 (8%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  + ++       T CG+P Y+APEII    Y    D W+ G +L++++ G+ 
Sbjct: 160 IKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 219

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF+G ++ +LFQ+I+    + +P      +  + V +C+ L+ ++P +R+       ++ 
Sbjct: 220 PFEGEDEDELFQSIMEH-NVAYPKS----MSKEAVAICKGLMTKHPGKRLGCGPEGERDI 274

Query: 141 FNHRF 145
             H F
Sbjct: 275 KEHAF 279

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  109 bits (273), Expect = 3e-26
 Identities = 19/148 (12%), Positives = 38/148 (25%), Gaps = 11/148 (7%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK--YDAKADLW 71
            NL +  +     L +GD                     Y   E +      +    + W
Sbjct: 223 DNLFIMPDGR---LMLGDVSALWK--VGTRGPASSVPVTYAPREFLNASTATFTHALNAW 277

Query: 72  SVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPP----GAIEELHPDCVDLCRCLL 127
            +G  ++++     PF              S  +        G+   L      L    L
Sbjct: 278 QLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFL 337

Query: 128 RQNPVERITFKEFFNHRFLGELRQTVHA 155
             +   R+   E        +L+  + +
Sbjct: 338 NFDRRRRLLPLEAMETPEFLQLQNEISS 365

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  110 bits (275), Expect = 4e-26
 Identities = 19/160 (11%), Positives = 43/160 (26%), Gaps = 19/160 (11%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL--TPQDLADTLCGSPLYMAPEIIQNHK-----YDA 66
            ++++        + +  F        +           P   A  ++   +        
Sbjct: 240 VDIVLDQRGG---VFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTF 296

Query: 67  KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCL 126
             D W++G  ++ +     P      L   + I  S +   P             L    
Sbjct: 297 AFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCK-NIP--------QPVRALLEGF 347

Query: 127 LRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKP 166
           LR    +R+   +        +LR  + A       + +P
Sbjct: 348 LRYPKEDRLLPLQAMETPEYEQLRTELSAALPLYQTDGEP 387

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  112 bits (280), Expect = 4e-26
 Identities = 36/125 (28%), Positives = 68/125 (54%), Gaps = 11/125 (8%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +KI DFG  + ++       T CG+P Y+APEII    Y    D W+ G +L++++ G+ 
Sbjct: 481 IKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 540

Query: 86  PFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEF 140
           PF+G ++ +LFQ+I+    + +P      +  + V +C+ L+ ++P +R+       ++ 
Sbjct: 541 PFEGEDEDELFQSIMEH-NVAYPKS----MSKEAVAICKGLMTKHPGKRLGCGPEGERDI 595

Query: 141 FNHRF 145
             H F
Sbjct: 596 KEHAF 600

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  107 bits (269), Expect = 5e-26
 Identities = 34/147 (23%), Positives = 66/147 (44%), Gaps = 22/147 (14%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTL-------------CGSPLYMAPEII 59
             N+  + ++V   +K+GDFG   ++   +   T+              G+ LYM+PE I
Sbjct: 146 PSNIFFTMDDV---VKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI 202

Query: 60  QNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC 119
             + Y  K D++S+G ILF+L+   P      +++   ++     L+FPP    + +P  
Sbjct: 203 HGNSYSHKVDIFSLGLILFELLY--PFSTQMERVRTLTDV---RNLKFPP-LFTQKYPCE 256

Query: 120 VDLCRCLLRQNPVERITFKEFFNHRFL 146
             + + +L  +P+ER        +   
Sbjct: 257 YVMVQDMLSPSPMERPEAINIIENAVF 283

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  109 bits (274), Expect = 2e-25
 Identities = 34/180 (18%), Positives = 71/180 (39%), Gaps = 18/180 (10%)

Query: 28  KIGDFGFA-RSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           +I D G A      Q       G+P +MAPE++   +YD   D +++G  L++++  + P
Sbjct: 329 RISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGP 388

Query: 87  FDGSNQL----QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TF 137
           F    +     +L Q +L    + +P        P   D C  LL+++P +R+     + 
Sbjct: 389 FRARGEKVENKELKQRVLEQ-AVTYPDK----FSPASKDFCEALLQKDPEKRLGFRDGSC 443

Query: 138 KEFFNHRFLGELR-QTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSSKNPK 196
                H    ++  + +  E   + P   P    + +   +D  +  +         + +
Sbjct: 444 DGLRTHPLFRDISWRQL--EAGMLTPPFVPDSRTVYAKNIQDVGAFSTVKGVAFEKADTE 501

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  106 bits (267), Expect = 2e-25
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 18/132 (13%)

Query: 27  LKIGDFGFARS--LTPQDLADTLCGSPLYMAPEIIQNHK--YDAKADLWSVGAILFQLVT 82
           + + DFG ++       + A   CG+  YMAP+I++     +D   D WS+G ++++L+T
Sbjct: 198 VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257

Query: 83  GKPPFDG----SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI--- 135
           G  PF      ++Q ++ + IL S E  +P      +     DL + LL ++P +R+   
Sbjct: 258 GASPFTVDGEKNSQAEISRRILKS-EPPYPQE----MSALAKDLIQRLLMKDPKKRLGCG 312

Query: 136 --TFKEFFNHRF 145
                E   H F
Sbjct: 313 PRDADEIKEHLF 324

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  106 bits (266), Expect = 3e-25
 Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 21/135 (15%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ D+G  +  L P D   T CG+P Y+APEI++   Y    D W++G ++F+++ G+ 
Sbjct: 149 IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 208

Query: 86  PF---------DGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI- 135
           PF         D + +  LFQ IL   ++R P      L      + +  L ++P ER+ 
Sbjct: 209 PFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPRS----LSVKAASVLKSFLNKDPKERLG 263

Query: 136 -----TFKEFFNHRF 145
                 F +   H F
Sbjct: 264 CHPQTGFADIQGHPF 278

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  107 bits (270), Expect = 6e-25
 Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 9/111 (8%)

Query: 28  KIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPF 87
           +I D G A  +          G+  YMAPE+++N +Y    D W++G +L++++ G+ PF
Sbjct: 326 RISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385

Query: 88  DGSNQL----QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
               +     ++ + +       +         P    LC  LL ++P ER
Sbjct: 386 QQRKKKIKREEVERLVKEV-PEEYSER----FSPQARSLCSQLLCKDPAER 431

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  103 bits (259), Expect = 8e-25
 Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 10/136 (7%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           C N+ ++    T  +KIGD G A        A  + G+P +MAPE+ +  KYD   D+++
Sbjct: 159 CDNIFITGP--TGSVKIGDLGLATLKR-ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYA 214

Query: 73  VGAILFQLVTGKPPF-DGSNQLQLFQNILTSTELRFPPGAIEELH-PDCVDLCRCLLRQN 130
            G  + ++ T + P+ +  N  Q+++ + +       P + +++  P+  ++    +RQN
Sbjct: 215 FGMCMLEMATSEYPYSECQNAAQIYRRVTSGV----KPASFDKVAIPEVKEIIEGCIRQN 270

Query: 131 PVERITFKEFFNHRFL 146
             ER + K+  NH F 
Sbjct: 271 KDERYSIKDLLNHAFF 286

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  104 bits (262), Expect = 2e-24
 Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 21/135 (15%)

Query: 27  LKIGDFGFAR-SLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKP 85
           +K+ D+G  +  L P D   T CG+P Y+APEI++   Y    D W++G ++F+++ G+ 
Sbjct: 192 IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRS 251

Query: 86  PF---------DGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI- 135
           PF         D + +  LFQ IL   ++R P      L      + +  L ++P ER+ 
Sbjct: 252 PFDIVGSSDNPDQNTEDYLFQVILEK-QIRIPR----SLSVKAASVLKSFLNKDPKERLG 306

Query: 136 -----TFKEFFNHRF 145
                 F +   H F
Sbjct: 307 CHPQTGFADIQGHPF 321

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  104 bits (260), Expect = 4e-24
 Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 13/129 (10%)

Query: 27  LKIGDFGFARSLTPQ--DLADTLCGSPLYMAPEIIQNH----KYDAKADLWSVGAILFQL 80
           LK+ DFG    +  +     DT  G+P Y++PE++++      Y  + D WSVG  L+++
Sbjct: 207 LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 266

Query: 81  VTGKPPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVERIT--- 136
           + G  PF   + +  +  I+     L FP     ++  +  +L    L  +   R+    
Sbjct: 267 LVGDTPFYADSLVGTYSKIMNHKNSLTFPDDN--DISKEAKNLICAFLT-DREVRLGRNG 323

Query: 137 FKEFFNHRF 145
            +E   H F
Sbjct: 324 VEEIKRHLF 332

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  103 bits (259), Expect = 7e-24
 Identities = 44/301 (14%), Positives = 104/301 (34%), Gaps = 47/301 (15%)

Query: 14  QNLLVSTNEVTPV----------LKIGDFGFARSLTP-----QDLADTLCGSPLYMAPEI 58
           QN+LVST+               + I DFG  + L       +   +   G+  + APE+
Sbjct: 144 QNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPEL 203

Query: 59  IQNH-------KYDAKADLWSVGAILFQLVT-GKPPFDGSN--QLQLFQNILTSTELRFP 108
           ++         +     D++S+G + + +++ GK PF      +  + + I +  E++  
Sbjct: 204 LEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFSLDEMKCL 263

Query: 109 PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMV 168
                 L  +  DL   ++  +P++R T  +   H           +++   + +    +
Sbjct: 264 HD--RSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF-----WPKSKKLEFLLKVSDRL 316

Query: 169 ELLNSSTPEDRHSLHSEHPTNSSSKNPKSACSSACDKVILNTGDQGNSLSTRDLHEFIPN 228
           E+ N   P                    +          L    + +S    DL   + N
Sbjct: 317 EIENRDPPSALLMKFDAGSDFVIPSGDWTVKFDKTFMDNLERYRKYHSSKLMDLLRALRN 376

Query: 229 MA------CDRMKKSVGS------QYSSDQLKDLMESIEKEYVLINSHFASTDGFSFYLD 276
                    + + + +G        Y + +  +L+  +   Y+++  + +       +L 
Sbjct: 377 KYHHFMDLPEDIAELMGPVPDGFYDYFTKRFPNLLIGV---YMIVKENLSDDQILREFLY 433

Query: 277 A 277
           +
Sbjct: 434 S 434

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  101 bits (254), Expect = 7e-24
 Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 30/159 (18%)

Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLAD--------TLCGSPLYMAPEIIQNH----- 62
           L    N+V+P +KI DF     +               T CGS  YMAPE+++       
Sbjct: 143 LCEHPNQVSP-VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEAS 201

Query: 63  KYDAKADLWSVGAILFQLVTGKPPFDGSN---------------QLQLFQNILTSTELRF 107
            YD + DLWS+G IL+ L++G PPF G                 Q  LF++I    +  F
Sbjct: 202 IYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG-KYEF 260

Query: 108 PPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           P      +     DL   LL ++  +R++  +   H ++
Sbjct: 261 PDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  104 bits (260), Expect = 1e-23
 Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 10/112 (8%)

Query: 27  LKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ-NHKYDAKADLWSVGAILFQLVTGKP 85
           ++I D G A     +       G+  YMAPE++Q    YD+ AD +S+G +LF+L+ G  
Sbjct: 331 VRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHS 389

Query: 86  PFDGSN---QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVER 134
           PF       + ++ +  LT   +  P        P+   L   LL+++   R
Sbjct: 390 PFRQHKTKDKHEIDRMTLTM-AVELPDS----FSPELRSLLEGLLQRDVNRR 436

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  100 bits (252), Expect = 2e-23
 Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 28/179 (15%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQ-------------DLADTLCGSPLYMAPEII- 59
           +NLL+S       +K+ DFG A +++               +   T   +P+Y  PEII 
Sbjct: 167 ENLLLSNQGT---IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIID 223

Query: 60  --QNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHP 117
              N     K D+W++G IL+ L   + PF+   +L+    I+ + +   PP   +    
Sbjct: 224 LYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR----IV-NGKYSIPPHDTQY--T 276

Query: 118 DCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTP 176
               L R +L+ NP ER++  E  +     E+    +    S + E         S+T 
Sbjct: 277 VFHSLIRAMLQVNPEERLSIAEVVHQLQ--EIAAARNVNPKSPITELLEQNGGYGSATL 333

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  100 bits (251), Expect = 2e-23
 Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLA------DTLCGSPLYMAPEIIQNHKYDAKA 68
           N+L+S++       + DFG A  L P  L       D + G+  +MAPE++     DAK 
Sbjct: 180 NVLLSSDGS--RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKV 237

Query: 69  DLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP-PGAIEELHPDCVDLCRCLL 127
           D+WS   ++  ++ G  P+    +  L   I +        P       P      +  L
Sbjct: 238 DIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIP---PSCAPLTAQAIQEGL 294

Query: 128 RQNPVERITFKEFFNHRFL 146
           R+ PV R +  E       
Sbjct: 295 RKEPVHRASAMELRRKVGK 313

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 99.7 bits (249), Expect = 3e-23
 Identities = 26/144 (18%), Positives = 48/144 (33%), Gaps = 20/144 (13%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTP-----------QDLADTLCGSPLYMAPEIIQNH 62
            N+L+          + D G                  QD A     +  Y APE+    
Sbjct: 163 TNILLGDE---GQPVLMDLGSMNQACIHVEGSRQALTLQDWA-AQRCTISYRAPELFSVQ 218

Query: 63  KY---DAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC 119
            +   D + D+WS+G +L+ ++ G+ P+D   Q      +    +L  P           
Sbjct: 219 SHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPR--HSSAL 276

Query: 120 VDLCRCLLRQNPVERITFKEFFNH 143
             L   ++  +P +R       + 
Sbjct: 277 WQLLNSMMTVDPHQRPHIPLLLSQ 300

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 99.6 bits (248), Expect = 4e-23
 Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 22/147 (14%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTL-------------CGSPLYMAPEII 59
             N+  + ++V   +K+GDFG   ++   +   T+              G+ LYM+PE I
Sbjct: 192 PSNIFFTMDDV---VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQI 248

Query: 60  QNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC 119
             + Y  K D++S+G ILF+L+          ++++  ++     L+FP     + +P  
Sbjct: 249 HGNNYSHKVDIFSLGLILFELLY--SFSTQMERVRIITDVR---NLKFPLL-FTQKYPQE 302

Query: 120 VDLCRCLLRQNPVERITFKEFFNHRFL 146
             + + +L  +P ER    +   +   
Sbjct: 303 HMMVQDMLSPSPTERPEATDIIENAIF 329

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  100 bits (252), Expect = 4e-23
 Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 13/130 (10%)

Query: 27  LKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVGAILFQ 79
           +++ DFG    L       +    G+P Y++PEI+Q       +Y  + D WS+G  +++
Sbjct: 214 IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYE 273

Query: 80  LVTGKPPFDGSNQLQLFQNILTSTELRFP-PGAIEELHPDCVDLCRCLLRQNPVERIT-- 136
           ++ G+ PF   + ++ +  I+ + + RF  P  + ++  +  DL R L+      R+   
Sbjct: 274 MLYGETPFYAESLVETYGKIM-NHKERFQFPTQVTDVSENAKDLIRRLICSRE-HRLGQN 331

Query: 137 -FKEFFNHRF 145
             ++F  H F
Sbjct: 332 GIEDFKKHPF 341

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 98.2 bits (245), Expect = 6e-23
 Identities = 24/156 (15%), Positives = 52/156 (33%), Gaps = 27/156 (17%)

Query: 13  CQNLLVSTNEVTP----------------VLKIGDFGFARSLTPQDLADTLCGSPLYMAP 56
             N+ +S   +                  + KIGD G    ++         G   ++A 
Sbjct: 143 PSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRIS---SPQVEEGDSRFLAN 199

Query: 57  EIIQNHK-YDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEEL 115
           E++Q +  +  KAD++++   +      +P          +  I      R P    + L
Sbjct: 200 EVLQENYTHLPKADIFALALTVVCAAGAEPLP---RNGDQWHEIRQGRLPRIP----QVL 252

Query: 116 HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ 151
             +  +L + ++  +P  R +      H  L    +
Sbjct: 253 SQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 288

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  100 bits (250), Expect = 6e-23
 Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 15/132 (11%)

Query: 27  LKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQN-------HKYDAKADLWSVGAIL 77
           +++ DFG    L       +    G+P Y++PEI+Q          Y  + D W++G   
Sbjct: 201 IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFA 260

Query: 78  FQLVTGKPPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLRQNPVERIT 136
           +++  G+ PF   +  + +  I+   E L  P    E +  +  D  + LL   P  R+ 
Sbjct: 261 YEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVD-EGVPEEARDFIQRLL-CPPETRLG 318

Query: 137 ---FKEFFNHRF 145
                +F  H F
Sbjct: 319 RGGAGDFRTHPF 330

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  100 bits (250), Expect = 7e-23
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 12/143 (8%)

Query: 14  QNLLVSTNEVTPVLK--IGDFGFARSLTPQDLA----DTLCGSPLYMAPEIIQ---NHKY 64
            N+L+S       +K  I DFG  + L     +      + G+  ++APE++        
Sbjct: 147 HNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENP 206

Query: 65  DAKADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLC 123
               D++S G + + +++ G  PF  S Q Q   NIL            +       +L 
Sbjct: 207 TYTVDIFSAGCVFYYVISEGSHPFGKSLQRQA--NILLGACSLDCLHPEKHEDVIARELI 264

Query: 124 RCLLRQNPVERITFKEFFNHRFL 146
             ++  +P +R + K    H F 
Sbjct: 265 EKMIAMDPQKRPSAKHVLKHPFF 287

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 97.8 bits (244), Expect = 8e-23
 Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 11/145 (7%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHK--YDAKAD 69
             N+L++T     VLKI DFG ++ L       +T  G+  YMAPEII      Y   AD
Sbjct: 150 GDNVLINTYS--GVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAAD 207

Query: 70  LWSVGAILFQLVTGKPPF-DGSNQLQLFQNILTSTELRFPPGAIEELHPDCVD-LCRCLL 127
           +WS+G  + ++ TGKPPF +          +         P   E +  +    + +C  
Sbjct: 208 IWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKV---HPEIPESMSAEAKAFILKCFE 264

Query: 128 RQNPVERITFKEFFNHRFLGELRQT 152
             +P +R    +     FL    + 
Sbjct: 265 P-DPDKRACANDLLVDEFLKVSSKK 288

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 97.8 bits (244), Expect = 1e-22
 Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 7/126 (5%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADT-LCGSPLYMAPEIIQNHKYDAKADLWSV 73
           NLLV        +K+ DFG +R      L+     G+P +MAPE++++   + K+D++S 
Sbjct: 169 NLLVDKK---YTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSF 225

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G IL++L T + P+   N  Q+   +      R        L+P    +        P +
Sbjct: 226 GVILWELATLQQPWGNLNPAQVVAAVGFKC-KR--LEIPRNLNPQVAAIIEGCWTNEPWK 282

Query: 134 RITFKE 139
           R +F  
Sbjct: 283 RPSFAT 288

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 98.1 bits (245), Expect = 2e-22
 Identities = 48/177 (27%), Positives = 71/177 (40%), Gaps = 38/177 (21%)

Query: 9   SANAC------QNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQN 61
           S N C       N+LV  NE    LK+ DFG A+ L+P +     +C S  Y APE+I  
Sbjct: 149 SVNVCHRDIKPHNVLV--NEADGTLKLCDFGSAKKLSPSEPNVAYIC-SRYYRAPELIFG 205

Query: 62  -HKYDAKADLWSVGAILFQLVTGKPPF---DGSNQLQLFQNIL-------------TSTE 104
              Y    D+WSVG I  +++ G+P F   + + QL     +L             + T+
Sbjct: 206 NQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTD 265

Query: 105 LRFP-----------PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
           +                   +   +  DL   LL+  P ER+   E   H +  EL 
Sbjct: 266 VDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 96.2 bits (240), Expect = 4e-22
 Identities = 46/164 (28%), Positives = 67/164 (40%), Gaps = 14/164 (8%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
             NLL+       VLKI DFG A  +      +   GS  +MAPE+ +   Y  K D++S
Sbjct: 133 PPNLLLVAGG--TVLKICDFGTACDIQTHMTNNK--GSAAWMAPEVFEGSNYSEKCDVFS 188

Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLLRQNP 131
            G IL++++T + PFD                 R  P  I+ L      L  RC   ++P
Sbjct: 189 WGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTR--PPLIKNLPKPIESLMTRC-WSKDP 245

Query: 132 VERITFKE------FFNHRFLGELRQTVHAEQHSVVPETKPMVE 169
            +R + +E           F G      +  QHS+ P     VE
Sbjct: 246 SQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPGEDGRVE 289

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 94.3 bits (235), Expect = 5e-21
 Identities = 58/214 (27%), Positives = 84/214 (39%), Gaps = 40/214 (18%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQN-HKYDAKADLW 71
           QNLL+  +  + VLK+ DFG A+ L   +     +C S  Y APE+I     Y    D+W
Sbjct: 170 QNLLL--DPPSGVLKLIDFGSAKILIAGEPNVSYIC-SRYYRAPELIFGATNYTTNIDIW 226

Query: 72  SVGAILFQLVTGKPPF---DGSNQLQLFQNIL-------------TSTELRFP---PGAI 112
           S G ++ +L+ G+P F    G +QL     +L                E +FP   P   
Sbjct: 227 STGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPF 286

Query: 113 EE-----LHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPM 167
            +       PD +DL   LL   P  R+T  E   H F  ELR        + +P  + +
Sbjct: 287 SKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELR-----TGEARMPNGREL 341

Query: 168 VELLN------SSTPEDRHSLHSEHPTNSSSKNP 195
             L N      S  P+    L  +H         
Sbjct: 342 PPLFNWTKEELSVRPDLISRLVPQHAEAELLSRG 375

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 94.0 bits (234), Expect = 9e-21
 Identities = 67/253 (26%), Positives = 94/253 (37%), Gaps = 50/253 (19%)

Query: 9   SANAC------QNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQN 61
           S   C      QNLL+  +  T VLK+ DFG A+ L   +     +C S  Y APE+I  
Sbjct: 174 SFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYIC-SRYYRAPELIFG 230

Query: 62  -HKYDAKADLWSVGAILFQLVTGKPPF---DGSNQLQLFQNIL-------------TSTE 104
              Y +  D+WS G +L +L+ G+P F    G +QL     +L               TE
Sbjct: 231 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 290

Query: 105 LRFP---PGAIEE-----LHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAE 156
            +FP        +       P+ + LC  LL   P  R+T  E   H F  ELR     +
Sbjct: 291 FKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR-----D 345

Query: 157 QHSVVPETKPMVELLN------SSTPEDRHSLHSEH----PTNSSSKNPKSACSSACDKV 206
            +  +P  +    L N      SS P     L   H       S+  N  +A  +     
Sbjct: 346 PNVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTNATAASDANTGDR 405

Query: 207 ILNTGDQGNSLST 219
                    S S 
Sbjct: 406 GQTNNAASASASN 418

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 90.8 bits (226), Expect = 1e-20
 Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 9/133 (6%)

Query: 12  ACQNLLVS-----TNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDA 66
              N+L+       +    +LKI DFG AR    +    +  G+  +MAPE+I+   +  
Sbjct: 135 KSSNILILQKVENGDLSNKILKITDFGLAREWH-RTTKMSAAGAYAWMAPEVIRASMFSK 193

Query: 67  KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCL 126
            +D+WS G +L++L+TG+ PF G + L +   +  +  L                L    
Sbjct: 194 GSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNK-LA--LPIPSTCPEPFAKLMEDC 250

Query: 127 LRQNPVERITFKE 139
              +P  R +F  
Sbjct: 251 WNPDPHSRPSFTN 263

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 92.5 bits (230), Expect = 2e-20
 Identities = 56/221 (25%), Positives = 83/221 (37%), Gaps = 46/221 (20%)

Query: 9   SANAC------QNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQN 61
           S   C      QNLLV  N     LK+ DFG A+ L P +     +C S  Y APE++  
Sbjct: 159 SLGICHRDIKPQNLLV--NSKDNTLKLCDFGSAKKLIPSEPSVAYIC-SRFYRAPELMLG 215

Query: 62  -HKYDAKADLWSVGAILFQLVTGKPPF---DGSNQLQLFQNIL-------------TSTE 104
             +Y    DLWS+G +  +L+ GKP F      +QL     I+               TE
Sbjct: 216 ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTE 275

Query: 105 LRFPPGAIEELH--------PDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR----QT 152
           +RFP    ++             +DL   +LR  P  RI   E   H F   LR      
Sbjct: 276 VRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLRNSYESE 335

Query: 153 VHAEQHSVVPETKPMVEL-------LNSSTPEDRHSLHSEH 186
           V    +      + + +L       L+       + +  ++
Sbjct: 336 VKNNSNFPHGVNQNIPQLFNFSPYELSIIPGNVLNRILPKN 376

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 89.2 bits (222), Expect = 5e-20
 Identities = 26/131 (19%), Positives = 54/131 (41%), Gaps = 15/131 (11%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDA---KAD 69
            +++++  +      +I       S      +     +P ++APE +Q    D     AD
Sbjct: 141 SRSVMIDEDMT---ARISMADVKFSFQ----SPGRMYAPAWVAPEALQKKPEDTNRRSAD 193

Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDLCRCLLR 128
           +WS   +L++LVT + PF   + +++   +         PPG    + P    L +  + 
Sbjct: 194 MWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPG----ISPHVSKLMKICMN 249

Query: 129 QNPVERITFKE 139
           ++P +R  F  
Sbjct: 250 EDPAKRPKFDM 260

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 88.9 bits (221), Expect = 8e-20
 Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 9/132 (6%)

Query: 13  CQNLLVSTN--EVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII--QNHKYDAKA 68
             N+ + +         K+ DFG ++          L G+  +MAPE I  +   Y  KA
Sbjct: 152 SPNIFLQSLDENAPVCAKVADFGLSQQSV--HSVSGLLGNFQWMAPETIGAEEESYTEKA 209

Query: 69  DLWSVGAILFQLVTGKPPFDGSNQLQL-FQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D +S   IL+ ++TG+ PFD  +  ++ F N++    LR  P   E+  P   ++     
Sbjct: 210 DTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR--PTIPEDCPPRLRNVIELCW 267

Query: 128 RQNPVERITFKE 139
             +P +R  F  
Sbjct: 268 SGDPKKRPHFSY 279

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 87.3 bits (217), Expect = 3e-19
 Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 13/139 (9%)

Query: 14  QNLLVSTN-EVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII----QNHKYDAKA 68
            N+L++   +V    K+ DFG +  L      D   G   YMAPE I        Y  K+
Sbjct: 139 SNVLINALGQV----KMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKS 194

Query: 69  DLWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS+G  + +L   + P+D      Q  + ++     + P         D    C   L
Sbjct: 195 DIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQC---L 251

Query: 128 RQNPVERITFKEFFNHRFL 146
           ++N  ER T+ E   H F 
Sbjct: 252 KKNSKERPTYPELMQHPFF 270

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 86.2 bits (214), Expect = 8e-19
 Identities = 46/139 (33%), Positives = 70/139 (50%), Gaps = 16/139 (11%)

Query: 13  CQNLLVSTN-EVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADL 70
             N+L+S + EV    K+ DFG A  LT  Q   +T  G+P +MAPE+I+   YD+KAD+
Sbjct: 147 AANVLLSEHGEV----KLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADI 202

Query: 71  WSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHP---DCVDLCRCLL 127
           WS+G    +L  G+PP    + +++   I  +     PP           + V+ C   L
Sbjct: 203 WSLGITAIELARGEPPHSELHPMKVLFLIPKNN----PPTLEGNYSKPLKEFVEAC---L 255

Query: 128 RQNPVERITFKEFFNHRFL 146
            + P  R T KE   H+F+
Sbjct: 256 NKEPSFRPTAKELLKHKFI 274

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 86.5 bits (215), Expect = 1e-18
 Identities = 47/175 (26%), Positives = 72/175 (41%), Gaps = 42/175 (24%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEIIQN-H 62
           NLL+++N     LK+ DFG AR +      ++                 Y APE++    
Sbjct: 142 NLLINSN---CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSA 198

Query: 63  KYDAKADLWSVGAILFQLVTGKPPFDGS---NQLQLFQNIL------------TSTELR- 106
           KY    D+WS G IL +L   +P F G    +QL L   I+             S   R 
Sbjct: 199 KYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRARE 258

Query: 107 -------FPPGAIEEL----HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                  +P   +E++    +P  +DL + +L  +P +RIT KE   H +L    
Sbjct: 259 YIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 85.0 bits (211), Expect = 2e-18
 Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 10/135 (7%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTL---CGSPLYMAPEIIQN---HKYD 65
              N+ +  +     +KIGDFG A   +    +       GS L+MAPE+I+    + Y 
Sbjct: 147 KSNNIFLHED---NTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203

Query: 66  AKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAI-EELHPDCVDLCR 124
            ++D+++ G +L++L+TG+ P+   N       ++    L      +          L  
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMA 263

Query: 125 CLLRQNPVERITFKE 139
             L++   ER +F  
Sbjct: 264 ECLKKKRDERPSFPR 278

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 86.1 bits (213), Expect = 2e-18
 Identities = 39/175 (22%), Positives = 66/175 (37%), Gaps = 51/175 (29%)

Query: 15  NLLVSTN-EVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           N+LV++  E+    K+ DFG +  L    +A++  G+  YM+PE +Q   Y  ++D+WS+
Sbjct: 162 NILVNSRGEI----KLCDFGVSGQLI-DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 216

Query: 74  GAILFQLVTGKPPFDGSNQ----------------------------------------- 92
           G  L ++  G+ P    +                                          
Sbjct: 217 GLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMA 276

Query: 93  -LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
             +L   I+     + P G       D V+ C   L +NP ER   K+   H F+
Sbjct: 277 IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKC---LIKNPAERADLKQLMVHAFI 328

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 84.9 bits (211), Expect = 2e-18
 Identities = 37/188 (19%), Positives = 73/188 (38%), Gaps = 51/188 (27%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEII-Q 60
            +N+L++ + V   +K+ DFGFAR L            P            Y +PE++  
Sbjct: 130 PENILITKHSV---IKLCDFGFARLL----------TGPSDYYDDEVATRWYRSPELLVG 176

Query: 61  NHKYDAKADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNIL-TSTE------------ 104
           + +Y    D+W++G +  +L++G P + G +   QL L +  L                 
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYF 236

Query: 105 --LRFPP--------GAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVH 154
             ++ P              +    + L +  L  +P ER+T ++  +H +   +R+   
Sbjct: 237 SGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIED 296

Query: 155 AEQHSVVP 162
             +    P
Sbjct: 297 LAKEHDKP 304

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 84.7 bits (210), Expect = 3e-18
 Identities = 40/133 (30%), Positives = 58/133 (43%), Gaps = 26/133 (19%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           NLL ++     +LK+ DFGFA                     E     KYD   D+WS+G
Sbjct: 147 NLLYTSKRPNAILKLTDFGFA--------------------KETT-GEKYDKSCDMWSLG 185

Query: 75  AILFQLVTGKPPFDGSNQL----QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
            I++ L+ G PPF  ++ L     +   I    +  FP     E+  +   L R LL+  
Sbjct: 186 VIMYILLCGYPPFYSNHGLAISPGMKTRIRMG-QYEFPNPEWSEVSEEVKMLIRNLLKTE 244

Query: 131 PVERITFKEFFNH 143
           P +R+T  EF NH
Sbjct: 245 PTQRMTITEFMNH 257

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 85.8 bits (212), Expect = 3e-18
 Identities = 16/161 (9%), Positives = 48/161 (29%), Gaps = 28/161 (17%)

Query: 13  CQNLLV--------STNEVTPVLKIGDFGFARSLT---PQDLADTLCGSPLYMAPEIIQN 61
             N ++          ++++  L + D G +  +       +    C +  +   E++ N
Sbjct: 200 PDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSN 259

Query: 62  HKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVD 121
             ++ + D + V A ++ ++ G      +   +     L                    +
Sbjct: 260 KPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFRRLPHLDM---------WNE 310

Query: 122 LCRCLLRQNPVERIT--------FKEFFNHRFLGELRQTVH 154
               +L       +          K+ F   +  ++R   +
Sbjct: 311 FFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYTNKIRALRN 351

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 83.9 bits (208), Expect = 5e-18
 Identities = 45/143 (31%), Positives = 70/143 (48%), Gaps = 14/143 (9%)

Query: 7   IVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYD 65
           I S N    LL     V    K+ DFGF   +TP+     T+ G+P +MAPE++    Y 
Sbjct: 142 IKSDNI---LLGMDGSV----KLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYG 194

Query: 66  AKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTST--ELRFPPGAIEELHPDCVDLC 123
            K D+WS+G +  +++ G+PP+   N L+    I T+   EL+ P         D ++ C
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFR-DFLNRC 253

Query: 124 RCLLRQNPVERITFKEFFNHRFL 146
              L  +  +R + KE   H+FL
Sbjct: 254 ---LEMDVEKRGSAKELLQHQFL 273

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 84.0 bits (208), Expect = 6e-18
 Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 17/141 (12%)

Query: 15  NLLVSTN-EVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ-----NHKYDAKA 68
           N+L+    ++    K+ DFG +  L      D   G   YMAPE I         YD +A
Sbjct: 155 NILLDERGQI----KLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRA 210

Query: 69  DLWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELH--PDCVDLCRC 125
           D+WS+G  L +L TG+ P+       ++   +L       PP     +    D     + 
Sbjct: 211 DVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE----PPLLPGHMGFSGDFQSFVKD 266

Query: 126 LLRQNPVERITFKEFFNHRFL 146
            L ++  +R  + +   H F+
Sbjct: 267 CLTKDHRKRPKYNKLLEHSFI 287

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 84.3 bits (209), Expect = 6e-18
 Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 12/139 (8%)

Query: 15  NLLVSTN-EVTPVLKIGDFGFARSLTPQDLADTLC-GSPLYMAPEIIQ----NHKYDAKA 68
           N+L+  +  +    K+ DFG +  L    +A T   G   YMAPE I        YD ++
Sbjct: 156 NILLDRSGNI----KLCDFGISGQLV-DSIAKTRDAGCRPYMAPERIDPSASRQGYDVRS 210

Query: 69  DLWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS+G  L++L TG+ P+   ++       ++     +       E  P  ++     L
Sbjct: 211 DVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCL 270

Query: 128 RQNPVERITFKEFFNHRFL 146
            ++  +R  +KE   H F+
Sbjct: 271 TKDESKRPKYKELLKHPFI 289

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 83.2 bits (206), Expect = 1e-17
 Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 12/138 (8%)

Query: 13  CQNLLVSTN-EVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYDAKADL 70
             N+L++T        K+ DFG A  LT      +T+ G+P +MAPE+IQ   Y+  AD+
Sbjct: 153 AGNILLNTEGHA----KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADI 208

Query: 71  WSVGAILFQLVTGKPPFDGSNQLQLFQNILTST--ELRFPPGAIEELHPDCVDLCRCLLR 128
           WS+G    ++  GKPP+   + ++    I T+     R P    +    D V  C   L 
Sbjct: 209 WSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFT-DFVKQC---LV 264

Query: 129 QNPVERITFKEFFNHRFL 146
           ++P +R T  +   H F+
Sbjct: 265 KSPEQRATATQLLQHPFV 282

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 82.8 bits (205), Expect = 2e-17
 Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 14/143 (9%)

Query: 7   IVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYD 65
           I S +    LL     V    K+ DFGF   ++       +L G+P +MAPE+I    Y 
Sbjct: 167 IKSDSI---LLTLDGRV----KLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYA 219

Query: 66  AKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTST--ELRFPPGAIEELHPDCVDLC 123
            + D+WS+G ++ ++V G+PP+   + +Q  + +  S   +L+        L  D ++  
Sbjct: 220 TEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLR-DFLERM 278

Query: 124 RCLLRQNPVERITFKEFFNHRFL 146
              L ++P ER T +E  +H FL
Sbjct: 279 ---LVRDPQERATAQELLDHPFL 298

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 82.7 bits (205), Expect = 2e-17
 Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 40/170 (23%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL--------YMAPEIIQN-HKYD 65
           NL +  N    VLKIGDFG AR + P           L        Y +P ++ + + Y 
Sbjct: 150 NLFI--NTEDLVLKIGDFGLARIMDPHYSHKGH----LSEGLVTKWYRSPRLLLSPNNYT 203

Query: 66  AKADLWSVGAILFQLVTGKPPFDGS---NQLQLFQNIL---TSTELRF------------ 107
              D+W+ G I  +++TGK  F G+    Q+QL    +      + +             
Sbjct: 204 KAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRND 263

Query: 108 ---PPGAIEEL----HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
              P   + +L      + VD    +L  +P++R+T +E  +H ++    
Sbjct: 264 MTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS 313

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 83.2 bits (206), Expect = 2e-17
 Identities = 34/173 (19%), Positives = 58/173 (33%), Gaps = 40/173 (23%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N++V ++     LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG
Sbjct: 157 NIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 213

Query: 75  AILFQLVTGKPPFDGS---NQLQL----------------------------------FQ 97
            I+ +++ G   F G+   +Q                                     F+
Sbjct: 214 CIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFE 273

Query: 98  NILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
            +             +       DL   +L  +  +RI+  E   H ++    
Sbjct: 274 KLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWY 326

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 82.2 bits (204), Expect = 2e-17
 Identities = 38/169 (22%), Positives = 60/169 (35%), Gaps = 45/169 (26%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL----------YMAPEIIQNH 62
            +N+LV++      +K+ DFG AR               +          Y APE++   
Sbjct: 148 PENILVTSGGT---VKLADFGLARI----------YSYQMALTPVVVTLWYRAPEVLLQS 194

Query: 63  KYDAKADLWSVGAILFQLVTGKPPFDGSN---QLQL-FQNILTSTE-------------- 104
            Y    D+WSVG I  ++   KP F G++   QL   F  I    E              
Sbjct: 195 TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAF 254

Query: 105 LRFPPGAIEE----LHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL 149
               P  ++     +      L   +L  NP +RI+      H +L + 
Sbjct: 255 PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 303

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 82.4 bits (204), Expect = 2e-17
 Identities = 40/192 (20%), Positives = 75/192 (39%), Gaps = 38/192 (19%)

Query: 13  CQNLLVSTN-EVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHK-----YD 65
            QN+L++ N EV    K+ DFG +  L       +T  G+P +MAPE+I   +     YD
Sbjct: 157 GQNVLLTENAEV----KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYD 212

Query: 66  AKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHP-------- 117
            K+DLWS+G    ++  G PP    + ++    I  +      P     L          
Sbjct: 213 FKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP----AP----RLKSKKWSKKFQ 264

Query: 118 DCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPE 177
             ++ C   L +N  +R   ++   H F+ +                  + + ++ +  +
Sbjct: 265 SFIESC---LVKNHSQRPATEQLMKHPFIRDQPNERQV--------RIQLKDHIDRTKKK 313

Query: 178 DRHSLHSEHPTN 189
                 +E+  +
Sbjct: 314 RGEKDETEYEYS 325

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 82.3 bits (204), Expect = 3e-17
 Identities = 43/183 (23%), Positives = 68/183 (37%), Gaps = 51/183 (27%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEII-Q 60
            +N+LVS + V   +K+ DFGFAR+L           +P            Y APE++  
Sbjct: 152 PENILVSQSGV---VKLCDFGFARTL----------AAPGEVYDDEVATRWYRAPELLVG 198

Query: 61  NHKYDAKADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNIL-TSTE------------ 104
           + KY    D+W++G ++ ++  G+P F G +   QL      L                 
Sbjct: 199 DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVF 258

Query: 105 --LRFPPGAIEE--------LHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVH 154
             +R P     E        L    +DL +  L  +P +R    E  +H F         
Sbjct: 259 AGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAER 318

Query: 155 AEQ 157
             Q
Sbjct: 319 FSQ 321

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 82.7 bits (205), Expect = 3e-17
 Identities = 46/171 (26%), Positives = 65/171 (38%), Gaps = 42/171 (24%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL--------YMAPEIIQN-HKYD 65
           NLL++T      LKI DFG AR   P           L        Y APEI+ N   Y 
Sbjct: 158 NLLLNTT---CDLKICDFGLARVADPDHDHTGF----LTEYVATRWYRAPEIMLNSKGYT 210

Query: 66  AKADLWSVGAILFQLVTGKPPFDGS---NQLQLFQNIL---TSTELRF------------ 107
              D+WSVG IL ++++ +P F G    +QL     IL   +  +L              
Sbjct: 211 KSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLS 270

Query: 108 ----PPGAIEEL----HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                      L        +DL   +L  NP +RI  ++   H +L +  
Sbjct: 271 LPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 81.6 bits (202), Expect = 3e-17
 Identities = 40/148 (27%), Positives = 65/148 (43%), Gaps = 23/148 (15%)

Query: 15  NLLVSTN-EVTPVLKIGDFGFARSLT------PQDLADTLCGSPLYMAPEIIQNHK-YDA 66
           N+L+  +  V    +I DFG +  L          +  T  G+P +MAPE+++  + YD 
Sbjct: 151 NILLGEDGSV----QIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDF 206

Query: 67  KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTST--ELRFPPGAIEELHP------D 118
           KAD+WS G    +L TG  P+     +++    L +    L       E L         
Sbjct: 207 KADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRK 266

Query: 119 CVDLCRCLLRQNPVERITFKEFFNHRFL 146
            + LC   L+++P +R T  E   H+F 
Sbjct: 267 MISLC---LQKDPEKRPTAAELLRHKFF 291

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 81.9 bits (203), Expect = 3e-17
 Identities = 45/190 (23%), Positives = 68/190 (35%), Gaps = 46/190 (24%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL----------YMAPEIIQNH 62
            QN+LV+++     +K+ DFG AR               +          Y APE++   
Sbjct: 148 PQNILVTSSGQ---IKLADFGLARI----------YSFQMALTSVVVTLWYRAPEVLLQS 194

Query: 63  KYDAKADLWSVGAILFQLVTGKPPFDGSN---QLQL-FQNILTSTE-------------- 104
            Y    DLWSVG I  ++   KP F GS+   QL      I    E              
Sbjct: 195 SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF 254

Query: 105 LRFPPGAIEE----LHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSV 160
                  IE+    +     DL    L  NP +RI+     +H +  +L +         
Sbjct: 255 HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLERCKENLDSH- 313

Query: 161 VPETKPMVEL 170
           +P ++   EL
Sbjct: 314 LPPSQNTSEL 323

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 80.8 bits (200), Expect = 6e-17
 Identities = 30/142 (21%), Positives = 53/142 (37%), Gaps = 24/142 (16%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLAD---------------TLCGSPLYMAPEII 59
           N LV  N+    + + DFG AR +  +                   T+ G+P +MAPE+I
Sbjct: 138 NCLVRENKN---VVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI 194

Query: 60  QNHKYDAKADLWSVGAILFQLVTGKPPFDG--SNQLQLFQNILTSTELRFPPGAIEELHP 117
               YD K D++S G +L +++             +    N+    +   PP        
Sbjct: 195 NGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFF- 253

Query: 118 DCVDLCRCLLRQNPVERITFKE 139
               +       +P +R +F +
Sbjct: 254 ---PITVRCCDLDPEKRPSFVK 272

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 80.5 bits (199), Expect = 9e-17
 Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 22/140 (15%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLAD------TLCGSPLYMAPEIIQNHK----- 63
           N+     +V     I DFG                     G   ++APEII+        
Sbjct: 160 NVFYDNGKV----VITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEE 215

Query: 64  ----YDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC 119
               +   +D++++G I ++L   + PF       +   + T  +          +  + 
Sbjct: 216 DKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQ---IGMGKEI 272

Query: 120 VDLCRCLLRQNPVERITFKE 139
            D+          ER TF +
Sbjct: 273 SDILLFCWAFEQEERPTFTK 292

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 80.4 bits (199), Expect = 1e-16
 Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 36/172 (20%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWS 72
            N+++  +     L++ D+G A    P    +    S  +  PE++ +++ YD   D+WS
Sbjct: 159 HNVMI--DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWS 216

Query: 73  VGAILFQLVTGKPPF----DGSNQLQLFQNILTSTELR---------------------- 106
           +G +L  ++  K PF    D  +QL     +L + +L                       
Sbjct: 217 LGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHS 276

Query: 107 -------FPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ 151
                          + P+ +D    LLR +   R+T +E   H +   + +
Sbjct: 277 RKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 328

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 80.8 bits (200), Expect = 1e-16
 Identities = 36/164 (21%), Positives = 59/164 (35%), Gaps = 31/164 (18%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSV 73
           N+L++ N     + I DF  AR  T             Y APE++     +    D+WS 
Sbjct: 164 NILLADN---NDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSA 220

Query: 74  GAILFQLVTGKPPFDGS---NQLQLFQNIL---TSTELRF-----------------PPG 110
           G ++ ++   K  F GS   NQL     ++      ++                   P  
Sbjct: 221 GCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPAR 280

Query: 111 AIEEL----HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
           A   +     P  +DL   +L  NP  RI+ ++   H +   L 
Sbjct: 281 AWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF 324

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 79.6 bits (197), Expect = 1e-16
 Identities = 31/125 (24%), Positives = 63/125 (50%), Gaps = 9/125 (7%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADT--LCGSPLYMAPEIIQNHKYDAKADLW 71
           QN+L+ +N+    LKI DFG A++L+   L  T  + G+  Y +PE  +    D   D++
Sbjct: 140 QNILIDSNKT---LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIY 196

Query: 72  SVGAILFQLVTGKPPFDGSNQLQL-FQNILTSTELRFPPGAIEELHPDCVD-LCRCLLRQ 129
           S+G +L++++ G+PPF+G   + +  ++I     +      + +  P  +  +      +
Sbjct: 197 SIGIVLYEMLVGEPPFNGETAVSIAIKHI--QDSVPNVTTDVRKDIPQSLSNVILRATEK 254

Query: 130 NPVER 134
           +   R
Sbjct: 255 DKANR 259

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score = 79.1 bits (196), Expect = 2e-16
 Identities = 48/173 (27%), Positives = 70/173 (40%), Gaps = 49/173 (28%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEII-Q 60
            QNLL++       LKI DFG AR+           G P+           Y AP+++  
Sbjct: 128 PQNLLINREGE---LKIADFGLARAF----------GIPVRKYTHEIVTLWYRAPDVLMG 174

Query: 61  NHKYDAKADLWSVGAILFQLVTGKPPFDGSNQL-QLFQ--NIL-TSTE------------ 104
           + KY    D+WSVG I  ++V G P F G ++  QL +   IL T               
Sbjct: 175 SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234

Query: 105 ----LRFPPGAIEE----LHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL 149
                 + P   E     L    +DL   +L+ +P +RIT K+   H +  E 
Sbjct: 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score = 79.6 bits (197), Expect = 2e-16
 Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 49/176 (27%)

Query: 13  CQNLLVSTNEV--TPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEII 59
            QNLL+S ++   TPVLKIGDFG AR+           G P+           Y  PEI+
Sbjct: 160 PQNLLLSVSDASETPVLKIGDFGLARA----------FGIPIRQFTHEIITLWYRPPEIL 209

Query: 60  -QNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQL-QLFQ--NIL-TSTE---------- 104
             +  Y    D+WS+  I  +++   P F G +++ QLF+   +L    +          
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALP 269

Query: 105 ------LRFPPGAIEE-----LHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL 149
                  +F    ++      L  + +DL   +L  +PV+RI+ K    H +    
Sbjct: 270 DWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHN 325

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 80.0 bits (198), Expect = 2e-16
 Identities = 42/166 (25%), Positives = 65/166 (39%), Gaps = 38/166 (22%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLAD---TLCGSPLYMAPEIIQN-HKYDAKADL 70
           NL V+ +     LKI DFG AR     ++     T      Y APE+I +   Y+   D+
Sbjct: 156 NLAVNED---CELKILDFGLARHADA-EMTGYVVTR----WYRAPEVILSWMHYNQTVDI 207

Query: 71  WSVGAILFQLVTGKPPFDGS---NQLQLFQNIL---TSTELRF----------------P 108
           WSVG I+ +++TGK  F G    +QL     +     +  ++                 P
Sbjct: 208 WSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP 267

Query: 109 PGAIEELHP----DCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                +L P       DL   +L  +  +R+T  +   H F    R
Sbjct: 268 RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR 313

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 78.4 bits (194), Expect = 4e-16
 Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLW 71
           +N+LVS ++      + DFG A + T + L       G+  YMAPE         +AD++
Sbjct: 163 ENILVSADDF---AYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIY 219

Query: 72  SVGAILFQLVTGKPPFDG 89
           ++  +L++ +TG PP+ G
Sbjct: 220 ALTCVLYECLTGSPPYQG 237

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 79.3 bits (196), Expect = 4e-16
 Identities = 41/171 (23%), Positives = 65/171 (38%), Gaps = 48/171 (28%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL--------YMAPEIIQN-HKYD 65
           NL V+ +     LKI DFG AR    +          +        Y APE+I N  +Y 
Sbjct: 158 NLAVNED---CELKILDFGLARQADSE----------MTGYVVTRWYRAPEVILNWMRYT 204

Query: 66  AKADLWSVGAILFQLVTGKPPFDGS---NQLQLFQNIL---TSTELRF------------ 107
              D+WSVG I+ +++TGK  F GS   +QL+    +     +  ++             
Sbjct: 205 QTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG 264

Query: 108 ----PPGAIEEL----HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                      +     P  V+L   +L  +  +R+T  E   H +   L 
Sbjct: 265 LPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 78.9 bits (195), Expect = 4e-16
 Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 36/165 (21%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQ--DLADTLCGSPLYMAPEIIQN-HKYDAKADLW 71
           NL V+ +     LKI DFG AR    +      T      Y APEI+ N   Y+   D+W
Sbjct: 162 NLAVNED---CELKILDFGLARHTADEMTGYVATR----WYRAPEIMLNWMHYNQTVDIW 214

Query: 72  SVGAILFQLVTGKPPFDGS---NQLQLFQNIL---TSTELRF----------------PP 109
           SVG I+ +L+TG+  F G+   +QL+L   ++    +  L+                 P 
Sbjct: 215 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274

Query: 110 GAIEEL----HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                +    +P  VDL   +L  +  +RIT  +   H +  +  
Sbjct: 275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYH 319

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 79.9 bits (197), Expect = 5e-16
 Identities = 35/173 (20%), Positives = 58/173 (33%), Gaps = 40/173 (23%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N++V ++     LKI DFG AR+     +      +  Y APE+I    Y    D+WSVG
Sbjct: 194 NIVVKSD---CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVG 250

Query: 75  AILFQLVTGKPPFDGS---NQLQL----------------------------------FQ 97
            I+ ++V  K  F G    +Q                                     F 
Sbjct: 251 CIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP 310

Query: 98  NILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
            +   +         +       DL   +L  +P +RI+  +   H ++    
Sbjct: 311 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 363

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 78.4 bits (194), Expect = 5e-16
 Identities = 52/211 (24%), Positives = 76/211 (36%), Gaps = 52/211 (24%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEII-Q 60
            QNLL++       LK+ DFG AR+             P            Y  P+I+  
Sbjct: 128 PQNLLINERGE---LKLADFGLARAK----------SIPTKTYDNEVVTLWYRPPDILLG 174

Query: 61  NHKYDAKADLWSVGAILFQLVTGKPPFDGSNQL-QLFQ--NIL-TSTE------------ 104
           +  Y  + D+W VG I +++ TG+P F GS    QL     IL T TE            
Sbjct: 175 STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 234

Query: 105 --LRFPPGAIEELH-------PDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHA 155
               +P    E L         D  DL   LL+     RI+ ++   H F   L + +H 
Sbjct: 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIH- 293

Query: 156 EQHSVVPETKPMVELLNSSTPEDRHSLHSEH 186
            +         + E+        R + H  H
Sbjct: 294 -KLPDTTSIFALKEIQLQKEASLRSAHHHHH 323

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 78.0 bits (193), Expect = 6e-16
 Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 50/174 (28%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEII-Q 60
            QNLL++++     LK+ DFG AR+           G P+           Y AP+++  
Sbjct: 147 PQNLLINSDGA---LKLADFGLARAF----------GIPVRSYTHEVVTLWYRAPDVLMG 193

Query: 61  NHKYDAKADLWSVGAILFQLVTGKPPFDGSNQL-QLFQ--NIL-TSTE------------ 104
           + KY    D+WS+G I  +++TGKP F G     QL +  +IL T               
Sbjct: 194 SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLW 253

Query: 105 --LRFPP-------GAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL 149
               F           I     + +DL   +L  +P +RI+ ++  NH +  +L
Sbjct: 254 KQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDL 307

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 77.7 bits (192), Expect = 8e-16
 Identities = 34/126 (26%), Positives = 67/126 (53%), Gaps = 10/126 (7%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADT----LCGSPLYMAPEIIQNHKYDAKAD 69
            N+++S       +K+ DFG AR++     + T    + G+  Y++PE  +    DA++D
Sbjct: 145 ANIMISATNA---VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201

Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQL-FQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           ++S+G +L++++TG+PPF G + + + +Q++    +   P    E L  D   +    L 
Sbjct: 202 VYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV--REDPIPPSARHEGLSADLDAVVLKALA 259

Query: 129 QNPVER 134
           +NP  R
Sbjct: 260 KNPENR 265

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 79.5 bits (196), Expect = 1e-15
 Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 19/121 (15%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N++++  ++    K+ D G    +        L G+P + APEI++        D+++V
Sbjct: 211 ENIMLTEEQL----KLIDLGAVSRINS---FGYLYGTPGFQAPEIVR-TGPTVATDIYTV 262

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G  L  L    P  +G               L      + + +     L R  +  +P +
Sbjct: 263 GRTLAALTLDLPTRNGR----------YVDGLPEDDPVL-KTYDSYGRLLRRAIDPDPRQ 311

Query: 134 R 134
           R
Sbjct: 312 R 312

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 76.9 bits (190), Expect = 1e-15
 Identities = 48/178 (26%), Positives = 72/178 (40%), Gaps = 54/178 (30%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEII-Q 60
            QNLL++       LK+GDFG AR+           G P+           Y AP+++  
Sbjct: 136 PQNLLINKRGQ---LKLGDFGLARAF----------GIPVNTFSSEVVTLWYRAPDVLMG 182

Query: 61  NHKYDAKADLWSVGAILFQLVTGKPPFDGSNQL-QLFQ--NIL-TSTE------------ 104
           +  Y    D+WS G IL +++TGKP F G+N   QL    +I+ T  E            
Sbjct: 183 SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKY 242

Query: 105 -------------LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL 149
                            P   E L  + +D    LL+ NP  R++ K+  +H +  E 
Sbjct: 243 NPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY 300

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 77.1 bits (190), Expect = 2e-15
 Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 14/136 (10%)

Query: 15  NLLVSTN-EVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK---YDAKADL 70
           N+L+S    V    K+GDFG A  + P   A++  G+P +MAPE+I       YD K D+
Sbjct: 184 NILLSEPGLV----KLGDFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDV 236

Query: 71  WSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           WS+G    +L   KPP    N +    +I  +       G   E   + VD C   L++ 
Sbjct: 237 WSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSC---LQKI 293

Query: 131 PVERITFKEFFNHRFL 146
           P +R T +    HRF+
Sbjct: 294 PQDRPTSEVLLKHRFV 309

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 76.3 bits (188), Expect = 4e-15
 Identities = 31/178 (17%), Positives = 64/178 (35%), Gaps = 48/178 (26%)

Query: 15  NLLVS---TNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLW 71
           N+L+    + E    +KI D G A     +   +++  +  Y +PE++    +   AD+W
Sbjct: 162 NVLMEIVDSPENLIQIKIADLGNA-CWYDEHYTNSIQ-TREYRSPEVLLGAPWGCGADIW 219

Query: 72  SVGAILFQLVTGKPPFDG-------SNQLQLFQ--------------------------- 97
           S   ++F+L+TG   F+         +   + Q                           
Sbjct: 220 STACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRG 279

Query: 98  NILTSTELRFPP---------GAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
            +   ++L+F P            ++   +  D    +L+ +P +R       NH +L
Sbjct: 280 LLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 75.3 bits (186), Expect = 6e-15
 Identities = 47/172 (27%), Positives = 64/172 (37%), Gaps = 48/172 (27%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEII-Q 60
             NLL+  N V   LK+ DFG A+S           GSP            Y APE++  
Sbjct: 140 PNNLLLDENGV---LKLADFGLAKSF----------GSPNRAYTHQVVTRWYRAPELLFG 186

Query: 61  NHKYDAKADLWSVGAILFQLVTGKPPFDGSNQL-QLFQ--NIL-TSTEL----------- 105
              Y    D+W+VG IL +L+   P   G + L QL +    L T TE            
Sbjct: 187 ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDY 246

Query: 106 ----RFPPGAIEE----LHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL 149
                FP   +         D +DL + L   NP  RIT  +    ++    
Sbjct: 247 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 298

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 73.9 bits (182), Expect = 1e-14
 Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 17/143 (11%)

Query: 13  CQNLLVSTN-EVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEII-----QNHKYD 65
             N+L++   ++    ++ DFG +          D+  G+P +MAPE++     ++  YD
Sbjct: 145 AGNVLMTLEGDI----RLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYD 200

Query: 66  AKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTST--ELRFPPGAIEELHPDCVDLC 123
            KAD+WS+G  L ++   +PP    N +++   I  S    L  P     E   D + + 
Sbjct: 201 YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFR-DFLKIA 259

Query: 124 RCLLRQNPVERITFKEFFNHRFL 146
              L +NP  R +  +   H F+
Sbjct: 260 ---LDKNPETRPSAAQLLEHPFV 279

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 74.7 bits (184), Expect = 1e-14
 Identities = 40/201 (19%), Positives = 68/201 (33%), Gaps = 68/201 (33%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---------------------- 52
           N+L++       +K+ DFG +RS              +                      
Sbjct: 139 NILLNAE---CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRW 195

Query: 53  YMAPEIIQN-HKYDAKADLWSVGAILFQLVTGKPPFDGS---NQLQLFQNIL---TSTEL 105
           Y APEI+    KY    D+WS+G IL +++ GKP F GS   NQL+    ++   ++ ++
Sbjct: 196 YRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDV 255

Query: 106 RF----------------PPGAIEEL--------------------HPDCVDLCRCLLRQ 129
                                                         + + +DL   LL+ 
Sbjct: 256 ESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF 315

Query: 130 NPVERITFKEFFNHRFLGELR 150
           NP +RI+  +   H F+    
Sbjct: 316 NPNKRISANDALKHPFVSIFH 336

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score = 71.8 bits (177), Expect = 5e-14
 Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 50/174 (28%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----------YMAPEII-Q 60
            QNLL++ N     LK+ +FG AR+           G P+           Y  P+++  
Sbjct: 129 PQNLLINRNGE---LKLANFGLARAF----------GIPVRCYSAEVVTLWYRPPDVLFG 175

Query: 61  NHKYDAKADLWSVGAILFQLVT-GKPPFDGSNQL-QLFQ--NIL-TSTE----------- 104
              Y    D+WS G I  +L   G+P F G++   QL +   +L T TE           
Sbjct: 176 AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPD 235

Query: 105 -----LRFPPGAIEE----LHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL 149
                +     ++      L+    DL + LL+ NPV+RI+ +E   H +  + 
Sbjct: 236 YKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 71.5 bits (176), Expect = 1e-13
 Identities = 39/169 (23%), Positives = 62/169 (36%), Gaps = 36/169 (21%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL-----YMAPEII-QNHKYDA 66
             N+L++ +    VLK+ DFG AR+ +    +     +       Y  PE++     Y  
Sbjct: 152 AANVLITRD---GVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGP 208

Query: 67  KADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNIL-TSTE--------------LRFP 108
             DLW  G I+ ++ T  P   G+    QL L   +  + T               L   
Sbjct: 209 PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELV 268

Query: 109 PGAIEELH---------PDCVDLCRCLLRQNPVERITFKEFFNHRFLGE 148
            G   ++          P  +DL   LL  +P +RI   +  NH F   
Sbjct: 269 KGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS 317

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 70.1 bits (172), Expect = 3e-13
 Identities = 40/182 (21%), Positives = 76/182 (41%), Gaps = 24/182 (13%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G  +   +MA E I +  Y  ++
Sbjct: 144 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G  +++L+T G  P+DG    ++   +     L  PP    +++         ++
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVY--------MIM 252

Query: 128 RQ----NPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLH 183
            +    +   R  F+E        E  +     Q  +V +    + L + +      +L 
Sbjct: 253 VKCWMIDADSRPKFRELII-----EFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRALM 307

Query: 184 SE 185
            E
Sbjct: 308 DE 309

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 68.9 bits (169), Expect = 6e-13
 Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 14/92 (15%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTL-----CGSPLYMAPEIIQNH------K 63
           N+LV  N       I D G A   +       +      G+  YMAPE++          
Sbjct: 143 NILVKKNGQ---CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFD 199

Query: 64  YDAKADLWSVGAILFQLVTGKPPFDGSNQLQL 95
              + D+W+ G +L+++             + 
Sbjct: 200 SYKRVDIWAFGLVLWEVARRMVSNGIVEDYKP 231

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 68.8 bits (169), Expect = 9e-13
 Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 39/140 (27%)

Query: 53  YMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNIL--------- 100
           Y APE+I    +    D+WS+G IL +   G   F   +    L + + IL         
Sbjct: 200 YRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQ 259

Query: 101 --------TSTELRFPPG-------------------AIEELHPDCVDLCRCLLRQNPVE 133
                       L +                      + +  H    DL + +L  +P +
Sbjct: 260 KTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319

Query: 134 RITFKEFFNHRFLGELRQTV 153
           RIT +E   H F   L++++
Sbjct: 320 RITLREALKHPFFDLLKKSI 339

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 69.2 bits (169), Expect = 9e-13
 Identities = 33/235 (14%), Positives = 70/235 (29%), Gaps = 62/235 (26%)

Query: 13  CQNLLVSTN-EVTPVLKIGDFGFARSL--------TPQDLADTLCGSPLYMAPEIIQ--N 61
             ++L+S + +V     +       S+           D          +++PE++Q   
Sbjct: 156 ASHILISVDGKV----YLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNL 211

Query: 62  HKYDAKADLWSVGAILFQLVTGKPPF--------------------DGSNQLQLFQNILT 101
             YDAK+D++SVG    +L  G  PF                      ++ +   +  ++
Sbjct: 212 QGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMS 271

Query: 102 STELRFPPGAIEELHP------------------------DCVDLCRCLLRQNPVERITF 137
            +      G  + L                            V+ C   L++NP  R + 
Sbjct: 272 PSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQC---LQRNPDARPSA 328

Query: 138 KEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSS 192
               NH F  ++++        ++    P+     S + +               
Sbjct: 329 STLLNHSFFKQIKRRASEALPELLRPVTPITNFEGSQSQDHSGIFGLVTNLEELE 383

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 68.0 bits (167), Expect = 1e-12
 Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 19/136 (13%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS--PL-YMAPEIIQNHKYDAKA 68
           A +N+LV T +    +KI DFG A+ L  ++      G   P+ +MA E I +  Y  ++
Sbjct: 144 AARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQS 200

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G  +++L+T G  P+DG    ++   +     L  PP    +++         ++
Sbjct: 201 DVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVY--------MIM 252

Query: 128 RQ----NPVERITFKE 139
           R+    +   R  F+E
Sbjct: 253 RKCWMIDADSRPKFRE 268

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 68.2 bits (167), Expect = 1e-12
 Identities = 30/155 (19%), Positives = 50/155 (32%), Gaps = 31/155 (20%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTL-----CGSPLYMAPEII------QN 61
            +N+LV  N       I D G A           +      G+  YM PE++       +
Sbjct: 170 SKNILVKKN---GTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNH 226

Query: 62  HKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTE----------------L 105
            +    AD++S G IL+++           + QL  + L  ++                 
Sbjct: 227 FQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRP 286

Query: 106 RFPPG-AIEELHPDCVDLCRCLLRQNPVERITFKE 139
            FP   + +E       L       NP  R+T   
Sbjct: 287 SFPNRWSSDECLRQMGKLMTECWAHNPASRLTALR 321

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 67.0 bits (164), Expect = 3e-12
 Identities = 29/133 (21%), Positives = 42/133 (31%), Gaps = 39/133 (29%)

Query: 53  YMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNIL--------- 100
           Y  PE+I    +    D+WS+G ILF+   G   F        L + + IL         
Sbjct: 205 YRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIH 264

Query: 101 --------TSTELRFPPGAIEEL-------------------HPDCVDLCRCLLRQNPVE 133
                       L +   + +                     H    DL R +L  +P +
Sbjct: 265 RTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQ 324

Query: 134 RITFKEFFNHRFL 146
           RIT  E   H F 
Sbjct: 325 RITLAEALLHPFF 337

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 66.9 bits (163), Expect = 4e-12
 Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 14/134 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +           + L   +MAPE I +  Y  ++
Sbjct: 220 AARNILLSEKNV---VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 276

Query: 69  DLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           D+WS G +L+++ + G  P+ G     +  + +   T +R P     E++         C
Sbjct: 277 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY----QTMLDC 332

Query: 126 LLRQNPVERITFKE 139
                P +R TF E
Sbjct: 333 -WHGEPSQRPTFSE 345

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 65.8 bits (161), Expect = 6e-12
 Identities = 33/135 (24%), Positives = 57/135 (42%), Gaps = 17/135 (12%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+L+ +      +++ DFG A  L P D       +     +MA E I   KY  ++
Sbjct: 142 AARNVLLKSPSQ---VQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQS 198

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHP---DCVDLCR 124
           D+WS G  +++L+T G  P+ G    ++   +     L  P     +++     C     
Sbjct: 199 DVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVYMVMVKC----- 253

Query: 125 CLLRQNPVERITFKE 139
                +   R TFKE
Sbjct: 254 --WMIDENIRPTFKE 266

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 65.9 bits (161), Expect = 6e-12
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 11/86 (12%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADT--LCGSPLYMAPEIIQ-----NHKYD 65
           +N+L+  N       I DFG A      +   DT    G+  YMAPE+++          
Sbjct: 160 KNVLLKNNLT---ACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAF 216

Query: 66  AKADLWSVGAILFQLVTGKPPFDGSN 91
            + D++++G +L++L +     DG  
Sbjct: 217 LRIDMYAMGLVLWELASRCTAADGPV 242

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 65.7 bits (161), Expect = 7e-12
 Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 14/134 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L++   +    KI DFG AR +      +       P+ +MAPE I N  Y  ++
Sbjct: 172 AARNILLTHGRI---TKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFES 228

Query: 69  DLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           D+WS G  L++L + G  P+ G     + ++ I     +  P  A  E++    D+   C
Sbjct: 229 DVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMY----DIMKTC 284

Query: 126 LLRQNPVERITFKE 139
               +P++R TFK+
Sbjct: 285 -WDADPLKRPTFKQ 297

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 66.4 bits (162), Expect = 8e-12
 Identities = 41/195 (21%), Positives = 61/195 (31%), Gaps = 68/195 (34%)

Query: 13  CQNLLVSTNEVTP-VLKIGDFGFARSLTPQDLADTLCGSPL--------------YMAPE 57
             N+LV         +KI D GFAR          L  SPL              Y APE
Sbjct: 156 PANILVMGEGPERGRVKIADMGFAR----------LFNSPLKPLADLDPVVVTFWYRAPE 205

Query: 58  II-QNHKYDAKADLWSVGAILFQLVTGKPPFDGSN------------QL----------- 93
           ++     Y    D+W++G I  +L+T +P F                QL           
Sbjct: 206 LLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPA 265

Query: 94  --------------QLFQNILTSTELRFPPGAIEELH-----PDCVDLCRCLLRQNPVER 134
                          L ++   +T          E H          L + LL  +P++R
Sbjct: 266 DKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKR 325

Query: 135 ITFKEFFNHRFLGEL 149
           IT ++     +  E 
Sbjct: 326 ITSEQAMQDPYFLED 340

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 66.3 bits (162), Expect = 9e-12
 Identities = 42/214 (19%), Positives = 74/214 (34%), Gaps = 81/214 (37%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---------------------- 52
           N L++ +     +K+ DFG AR++  +   + +                           
Sbjct: 159 NCLLNQD---CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTR 215

Query: 53  -YMAPEIIQN-HKYDAKADLWSVGAILFQLVTG-----------KPPFDGS--------- 90
            Y APE+I     Y    D+WS G I  +L+              P F GS         
Sbjct: 216 WYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDR 275

Query: 91  -----------NQLQLFQNIL---TSTELRF----------------PPGAIEEL----H 116
                      +QL +  NI+   T  +L+                  P  +++      
Sbjct: 276 NSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSIS 335

Query: 117 PDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
            D ++L   +L+ NP +RIT  +  +H +L ++R
Sbjct: 336 DDGINLLESMLKFNPNKRITIDQALDHPYLKDVR 369

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 65.4 bits (160), Expect = 9e-12
 Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 15/134 (11%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +V+ +     +KIGDFG  R +   D         L   +M+PE +++  +   +
Sbjct: 165 AARNCMVAEDFT---VKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYS 221

Query: 69  DLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           D+WS G +L+++ T  + P+ G SN+ Q+ + ++    L  P    + L     +L   C
Sbjct: 222 DVWSFGVVLWEIATLAEQPYQGLSNE-QVLRFVMEGGLLDKPDNCPDMLF----ELMRMC 276

Query: 126 LLRQNPVERITFKE 139
             + NP  R +F E
Sbjct: 277 -WQYNPKMRPSFLE 289

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 65.4 bits (160), Expect = 1e-11
 Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 16/135 (11%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+L++   V    KIGDFG AR +      +       P+ +MAPE I +  Y  ++
Sbjct: 191 AARNVLLTNGHV---AKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQS 247

Query: 69  DLWSVGAILFQLVT-GKPPFDG--SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CR 124
           D+WS G +L+++ + G  P+ G   N  + ++ +    ++  P  A + ++     +   
Sbjct: 248 DVWSYGILLWEIFSLGLNPYPGILVNS-KFYKLVKDGYQMAQPAFAPKNIY----SIMQA 302

Query: 125 CLLRQNPVERITFKE 139
           C     P  R TF++
Sbjct: 303 C-WALEPTHRPTFQQ 316

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 66.0 bits (161), Expect = 1e-11
 Identities = 54/278 (19%), Positives = 87/278 (31%), Gaps = 94/278 (33%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL--------------------- 52
            N LV+ +     +K+ DFG AR++   +  ++                           
Sbjct: 185 ANCLVNQD---CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLT 241

Query: 53  -------YMAPEIIQN-HKYDAKADLWSVGAILFQLVT-----------GKPPFDGS--- 90
                  Y APE+I     Y    D+WS+G I  +L+              P F GS   
Sbjct: 242 GHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCF 301

Query: 91  --------------------NQLQLFQNIL-----------TSTELR--------FPPGA 111
                               +QL +  NIL              + +             
Sbjct: 302 PLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTD 361

Query: 112 IEEL----HPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPM 167
           + E       D + L + +L  NP +RIT  E   H F  E+R     E ++      P 
Sbjct: 362 LAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVR-IAEVETNATEKVRLPF 420

Query: 168 VELLNSSTPEDRHSLHSE----HPTNSSSKNPKSACSS 201
            + +N   P+ R++   E    HP     +   +  SS
Sbjct: 421 NDWMNMDEPQLRYAFVKEIQRYHPEIQLPRRSPNRASS 458

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 65.0 bits (159), Expect = 1e-11
 Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 14/134 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPL-YMAPEIIQNHKYDAKA 68
           A +N+LV+  +V   +KI DFG AR +      +       P+ +MAPE +    Y  K+
Sbjct: 199 AARNVLVTHGKV---VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKS 255

Query: 69  DLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           D+WS G +L+++ + G  P+ G       ++ I    ++  P  A EE++     +   C
Sbjct: 256 DVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIY----IIMQSC 311

Query: 126 LLRQNPVERITFKE 139
               +  +R +F  
Sbjct: 312 -WAFDSRKRPSFPN 324

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 64.7 bits (158), Expect = 1e-11
 Identities = 31/133 (23%), Positives = 68/133 (51%), Gaps = 13/133 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N +++ +     + + DFG +R +   D     C S L   ++A E + ++ Y   +
Sbjct: 164 AARNCMLAEDMT---VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHS 220

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCL 126
           D+W+ G  +++++T G+ P+ G    +++  ++    L+ PP  +EE++    DL  +C 
Sbjct: 221 DVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPPECMEEVY----DLMYQC- 275

Query: 127 LRQNPVERITFKE 139
              +P +R +F  
Sbjct: 276 WSADPKQRPSFTC 288

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 64.6 bits (158), Expect = 2e-11
 Identities = 43/147 (29%), Positives = 72/147 (48%), Gaps = 17/147 (11%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +KIGDFG +R +   D       + L   +M PE I   K+  ++
Sbjct: 160 ATRNCLVGANLL---VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTES 216

Query: 69  DLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           D+WS G IL+++ T GK P+   SN  ++ + I     L  P    +E++    D+   C
Sbjct: 217 DVWSFGVILWEIFTYGKQPWFQLSNT-EVIECITQGRVLERPRVCPKEVY----DVMLGC 271

Query: 126 LLRQNPVERITFKEFFNHRFLGELRQT 152
             ++ P +R+  KE   ++ L  L + 
Sbjct: 272 -WQREPQQRLNIKEI--YKILHALGKA 295

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 65.2 bits (159), Expect = 2e-11
 Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 12/132 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-PL-YMAPEIIQNHKYDAKAD 69
              N+LV  N V    K+ DFG AR +   +         P+ + APE     ++  K+D
Sbjct: 307 RAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363

Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLL 127
           +WS G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  
Sbjct: 364 VWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-W 418

Query: 128 RQNPVERITFKE 139
           R+ P ER TF+ 
Sbjct: 419 RKEPEERPTFEY 430

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 63.4 bits (155), Expect = 2e-11
 Identities = 30/146 (20%), Positives = 63/146 (43%), Gaps = 20/146 (13%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LVS + V    K+ DFG  +     + + T     L   + APE ++  K+  K+
Sbjct: 144 AARNVLVSEDNV---AKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKS 195

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCL 126
           D+WS G +L+++ + G+ P+       +   +    ++  P G    ++    ++   C 
Sbjct: 196 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY----EVMKNC- 250

Query: 127 LRQNPVERITFKEFFNHRFLGELRQT 152
              +   R +F +      L  ++  
Sbjct: 251 WHLDAAMRPSFLQL--REQLEHIKTH 274

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 63.8 bits (156), Expect = 3e-11
 Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 15/135 (11%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPL---YMAPEIIQNHKYDA 66
           A +N ++        +K+ DFG AR +  ++        G+ L   +MA E +Q  K+  
Sbjct: 155 AARNCMLDEKFT---VKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTT 211

Query: 67  KADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CR 124
           K+D+WS G +L++L+T G PP+   N   +   +L    L  P    + L+    ++  +
Sbjct: 212 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY----EVMLK 267

Query: 125 CLLRQNPVERITFKE 139
           C        R +F E
Sbjct: 268 C-WHPKAEMRPSFSE 281

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 63.8 bits (156), Expect = 3e-11
 Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 15/135 (11%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS----PL-YMAPEIIQNHKYDA 66
           A +N ++  +     +K+ DFG AR +  ++            P+ + A E +Q +++  
Sbjct: 151 AARNCMLDESFT---VKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTT 207

Query: 67  KADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CR 124
           K+D+WS G +L++L+T G PP+   +   L   +     L  P    + L+     +  +
Sbjct: 208 KSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEYCPDSLY----QVMQQ 263

Query: 125 CLLRQNPVERITFKE 139
           C    +P  R TF+ 
Sbjct: 264 C-WEADPAVRPTFRV 277

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 64.5 bits (157), Expect = 3e-11
 Identities = 30/167 (17%), Positives = 48/167 (28%), Gaps = 47/167 (28%)

Query: 24  TPVLKIGDFGFARSLTPQDLADTLCGSPL-YMAPEIIQNHKYDAKADLWSVGAILFQLVT 82
              +KI D G A          T       Y + E++    Y+  AD+WS   + F+L T
Sbjct: 232 KLKVKIADLGNAC---WVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELAT 288

Query: 83  GKPPFDGSN---------QLQLFQNIL-------------------TSTELRFPPGAI-- 112
           G   F+  +          + L   +L                      +L+        
Sbjct: 289 GDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPW 348

Query: 113 -------------EELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
                        +E      D    +L   P +R T  E   H +L
Sbjct: 349 GLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWL 395

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 63.4 bits (155), Expect = 3e-11
 Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 15/134 (11%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV        +KI D G  R +   D    L  S L   +MAPE I   K+   +
Sbjct: 155 ATRNVLVYDKLN---VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDS 211

Query: 69  DLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           D+WS G +L+++ + G  P+ G SNQ  + + I     L  P      ++     L   C
Sbjct: 212 DIWSYGVVLWEVFSYGLQPYCGYSNQ-DVVEMIRNRQVLPCPDDCPAWVY----ALMIEC 266

Query: 126 LLRQNPVERITFKE 139
              + P  R  FK+
Sbjct: 267 -WNEFPSRRPRFKD 279

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 63.9 bits (156), Expect = 3e-11
 Identities = 30/135 (22%), Positives = 47/135 (34%), Gaps = 41/135 (30%)

Query: 53  YMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSN---QLQLFQNIL--------- 100
           Y APE+I N  +D  +D+WS G +L +L TG   F        L + ++I+         
Sbjct: 225 YRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLY 284

Query: 101 -------------TSTELRFP----------------PGAIEELHPDCVDLCRCLLRQNP 131
                           +L +P                P      H    D    +L+ +P
Sbjct: 285 EATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDP 344

Query: 132 VERITFKEFFNHRFL 146
             R +  E   H+FL
Sbjct: 345 TLRPSPAELLKHKFL 359

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 63.4 bits (155), Expect = 3e-11
 Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 14/134 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+L+S   V   +KI DFG AR +           + L   +MAPE I +  Y  ++
Sbjct: 175 AARNILLSEKNV---VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQS 231

Query: 69  DLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           D+WS G +L+++ + G  P+ G     +  + +   T +R P     E++         C
Sbjct: 232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMY----QTMLDC 287

Query: 126 LLRQNPVERITFKE 139
                P +R TF E
Sbjct: 288 -WHGEPSQRPTFSE 300

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 63.5 bits (155), Expect = 4e-11
 Identities = 28/133 (21%), Positives = 65/133 (48%), Gaps = 13/133 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N ++  +     + + DFG ++ +   D       + +   ++A E + +  Y +K+
Sbjct: 174 AARNCMLRDDMT---VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKS 230

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCL 126
           D+W+ G  ++++ T G  P+ G    +++  +L    L+ P   ++EL+    ++   C 
Sbjct: 231 DVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPEDCLDELY----EIMYSC- 285

Query: 127 LRQNPVERITFKE 139
            R +P++R TF  
Sbjct: 286 WRTDPLDRPTFSV 298

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 63.6 bits (155), Expect = 5e-11
 Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 15/135 (11%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS----PL-YMAPEIIQNHKYDA 66
           A +N ++        +K+ DFG AR +  ++       +    P+ +MA E +Q  K+  
Sbjct: 219 AARNCMLDEKFT---VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTT 275

Query: 67  KADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CR 124
           K+D+WS G +L++L+T G PP+   N   +   +L    L  P    + L+    ++  +
Sbjct: 276 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLY----EVMLK 331

Query: 125 CLLRQNPVERITFKE 139
           C        R +F E
Sbjct: 332 C-WHPKAEMRPSFSE 345

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 63.1 bits (154), Expect = 5e-11
 Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 17/147 (11%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV    V   +KIGDFG +R +   D       + L   +M PE I   K+  ++
Sbjct: 185 ATRNCLVGQGLV---VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTES 241

Query: 69  DLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           D+WS G +L+++ T GK P+   SN  +    I    EL  P     E++     +   C
Sbjct: 242 DVWSFGVVLWEIFTYGKQPWYQLSNT-EAIDCITQGRELERPRACPPEVY----AIMRGC 296

Query: 126 LLRQNPVERITFKEFFNHRFLGELRQT 152
             ++ P +R + K+   H  L  L Q 
Sbjct: 297 -WQREPQQRHSIKDV--HARLQALAQA 320

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 63.0 bits (154), Expect = 6e-11
 Identities = 38/134 (28%), Positives = 67/134 (50%), Gaps = 15/134 (11%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+       +KI DFG +R +  +D         +   +MA E + +H Y  ++
Sbjct: 177 AARNILVAEGRK---MKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQS 233

Query: 69  DLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           D+WS G +L+++VT G  P+ G   + +LF  + T   +  P    EE++     L  +C
Sbjct: 234 DVWSFGVLLWEIVTLGGNPYPGIPPE-RLFNLLKTGHRMERPDNCSEEMY----RLMLQC 288

Query: 126 LLRQNPVERITFKE 139
             +Q P +R  F +
Sbjct: 289 -WKQEPDKRPVFAD 301

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 63.1 bits (154), Expect = 6e-11
 Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 11/132 (8%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ N V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 230 AARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 286

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+   +  C    
Sbjct: 287 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY-MMMRDCW--- 342

Query: 128 RQNPVERITFKE 139
              P +R TFK+
Sbjct: 343 HAVPSQRPTFKQ 354

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 63.2 bits (154), Expect = 7e-11
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 6/89 (6%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N+L+  N     +KI DFG +     Q +   +  S  Y +PE++    YD   D+WS+G
Sbjct: 189 NILL-CNPKRSAIKIVDFGSS-CQLGQRIYQYIQ-SRFYRSPEVLLGMPYDLAIDMWSLG 245

Query: 75  AILFQLVTGKPPFDGSN---QLQLFQNIL 100
            IL ++ TG+P F G+N   Q+     +L
Sbjct: 246 CILVEMHTGEPLFSGANEVDQMNKIVEVL 274

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 62.7 bits (153), Expect = 8e-11
 Identities = 39/133 (29%), Positives = 64/133 (48%), Gaps = 13/133 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ N V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 184 AARNVLVTENNV---MKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQS 240

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCL 126
           D+WS G +++++ T G  P+ G    +LF+ +     +  P     EL+     +   C 
Sbjct: 241 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCTNELY----MMMRDC- 295

Query: 127 LRQNPVERITFKE 139
               P +R TFK+
Sbjct: 296 WHAVPSQRPTFKQ 308

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 63.7 bits (155), Expect = 8e-11
 Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 14/133 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCG-SPL-YMAPEIIQNHKYDAKAD 69
           A +N+LVS+N+    +K+GDFG +R +          G  P+ +MAPE I   ++ + +D
Sbjct: 518 AARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 574

Query: 70  LWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCL 126
           +W  G  +++++  G  PF G  N   +   I     L  PP     L+     L  +C 
Sbjct: 575 VWMFGVCMWEILMHGVKPFQGVKNN-DVIGRIENGERLPMPPNCPPTLY----SLMTKC- 628

Query: 127 LRQNPVERITFKE 139
              +P  R  F E
Sbjct: 629 WAYDPSRRPRFTE 641

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 63.4 bits (154), Expect = 9e-11
 Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 12/132 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-PL-YMAPEIIQNHKYDAKAD 69
              N+LV  N V    K+ DFG AR +   +         P+ + APE     ++  K+D
Sbjct: 390 RAANILVGENLV---CKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446

Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLL 127
           +WS G +L +L T G+ P+ G    ++   +     +  PP   E LH    DL C+C  
Sbjct: 447 VWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLH----DLMCQC-W 501

Query: 128 RQNPVERITFKE 139
           R+ P ER TF+ 
Sbjct: 502 RKEPEERPTFEY 513

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 63.3 bits (154), Expect = 9e-11
 Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 12/136 (8%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPL-YMAPEIIQNHKYDAKAD 69
           A +N LV  N +   +K+ DFG +R +T     A      P+ + APE +  +K+  K+D
Sbjct: 345 AARNCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSD 401

Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLL 127
           +W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L   C  
Sbjct: 402 VWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRAC-W 456

Query: 128 RQNPVERITFKEFFNH 143
           + NP +R +F E    
Sbjct: 457 QWNPSDRPSFAEIHQA 472

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 61.9 bits (151), Expect = 9e-11
 Identities = 37/133 (27%), Positives = 69/133 (51%), Gaps = 14/133 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N +   +K+ DFG +R +T  D      G+     + APE +  +K+  K+
Sbjct: 138 AARNCLVGENHL---VKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNKFSIKS 193

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCL 126
           D+W+ G +L+++ T G  P+ G +  Q+++ +     +  P G  E+++    +L   C 
Sbjct: 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVY----ELMRAC- 248

Query: 127 LRQNPVERITFKE 139
            + NP +R +F E
Sbjct: 249 WQWNPSDRPSFAE 261

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 62.3 bits (152), Expect = 1e-10
 Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 10/133 (7%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N L++      V KIGDFG AR +           + L   +M PE      + +K 
Sbjct: 167 AARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKT 226

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCL 126
           D WS G +L+++ + G  P+   +  ++ + + +   +  P      ++     +  +C 
Sbjct: 227 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIMTQC- 281

Query: 127 LRQNPVERITFKE 139
            +  P +R  F  
Sbjct: 282 WQHQPEDRPNFAI 294

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 62.1 bits (151), Expect = 1e-10
 Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 14/93 (15%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFAR----SLTPQDLADT-LCGSPLYMAPEII------QNH 62
           +N+LV  N       I D G A     +    D+A     G+  YMAPE++      ++ 
Sbjct: 176 KNILVKKN---GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 232

Query: 63  KYDAKADLWSVGAILFQLVTGKPPFDGSNQLQL 95
           +   +AD++++G + +++             QL
Sbjct: 233 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQL 265

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 61.1 bits (149), Expect = 1e-10
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 14/133 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
              N+LVS        KI DFG AR +   +      G+     + APE I    +  K+
Sbjct: 136 RAANILVSDTLS---CKIADFGLARLIE-DNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCL 126
           D+WS G +L ++VT G+ P+ G    ++ QN+     +  P    EEL+     L   C 
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPEELY----QLMRLC- 246

Query: 127 LRQNPVERITFKE 139
            ++ P +R TF  
Sbjct: 247 WKERPEDRPTFDY 259

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 62.0 bits (151), Expect = 1e-10
 Identities = 34/163 (20%), Positives = 65/163 (39%), Gaps = 12/163 (7%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N L++      V KIGDFG AR +           + L   +M PE      + +K 
Sbjct: 208 AARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKT 267

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCL 126
           D WS G +L+++ + G  P+   +  ++ + + +   +  P      ++     +  +C 
Sbjct: 268 DTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNCPGPVY----RIMTQC- 322

Query: 127 LRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVE 169
            +  P +R  F        +    Q       ++  E  P+VE
Sbjct: 323 WQHQPEDRPNFAII--LERIEYCTQDPDVINTALPIEYGPLVE 363

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 35/152 (23%), Positives = 70/152 (46%), Gaps = 19/152 (12%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  +     +K+ DFG  R +   D   +  G+     + APE+    KY +K+
Sbjct: 131 AARNCLVDRDLC---VKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCL 126
           D+W+ G +++++ + GK P+D     ++   +     L  P  A + ++     +   C 
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDTIY----QIMYSC- 241

Query: 127 LRQNPVERITFKEFFNHRFLGELRQTVHAEQH 158
             + P +R TF++      +  LR+    ++H
Sbjct: 242 WHELPEKRPTFQQL--LSSIEPLRE---KDKH 268

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 16/146 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N+V   +K+ DFG  R +   D   +  G+     + +PE+    +Y +K+
Sbjct: 131 AARNCLVGENQV---IKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKS 186

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCL 126
           D+WS G +++++ + GK P++  +  ++ ++I T   L  P  A   ++     +   C 
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVY----QIMNHC- 241

Query: 127 LRQNPVERITFKEFFNHRFLGELRQT 152
            R+ P +R  F      R L E+ ++
Sbjct: 242 WRERPEDRPAFSRL--LRQLAEIAES 265

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 61.9 bits (151), Expect = 2e-10
 Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 17/146 (11%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLY----MAPEIIQNHKYDAK 67
           A +N LV+   V   LKI DFG +R      +     G         APE +   +Y ++
Sbjct: 240 AARNCLVTEKNV---LKISDFGMSREEA-DGVYAASGGLRQVPVKWTAPEALNYGRYSSE 295

Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           +D+WS G +L++  + G  P+   +  Q  + +     L  P    + +      L  +C
Sbjct: 296 SDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVF----RLMEQC 351

Query: 126 LLRQNPVERITFKEFFNHRFLGELRQ 151
                P +R +F     ++ L  +R+
Sbjct: 352 -WAYEPGQRPSFSTI--YQELQSIRK 374

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 62.0 bits (151), Expect = 2e-10
 Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 15/156 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV+ + V   +KI DFG AR +   D         L   +MAPE + +  Y  ++
Sbjct: 218 AARNVLVTEDNV---MKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQS 274

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCL 126
           D+WS G +L+++ T G  P+ G    +LF+ +     +  P     EL+     +   C 
Sbjct: 275 DVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCTNELY----MMMRDC- 329

Query: 127 LRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVP 162
               P +R TFK+      L  +      ++     
Sbjct: 330 WHAVPSQRPTFKQL--VEDLDRIVALTSNQEMGYYH 363

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 61.2 bits (149), Expect = 2e-10
 Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 17/146 (11%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV  N V   +KI DFG +R++   D         +   +M PE I  ++Y  ++
Sbjct: 201 ATRNCLVGENMV---VKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTES 257

Query: 69  DLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           D+W+ G +L+++ + G  P+ G +++ ++   +     L  P     EL+    +L   C
Sbjct: 258 DVWAYGVVLWEIFSYGLQPYYGMAHE-EVIYYVRDGNILACPENCPLELY----NLMRLC 312

Query: 126 LLRQNPVERITFKEFFNHRFLGELRQ 151
              + P +R +F     HR L  + +
Sbjct: 313 -WSKLPADRPSFCSI--HRILQRMCE 335

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 61.7 bits (150), Expect = 2e-10
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 6/89 (6%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N+L+   +    +K+ DFG +     Q +   +  S  Y APE+I   +Y    D+WS+G
Sbjct: 230 NILL-KQQGRSGIKVIDFGSS-CYEHQRVYTYIQ-SRFYRAPEVILGARYGMPIDMWSLG 286

Query: 75  AILFQLVTGKPPFDGSN---QLQLFQNIL 100
            IL +L+TG P   G +   QL     +L
Sbjct: 287 CILAELLTGYPLLPGEDEGDQLACMIELL 315

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 60.8 bits (148), Expect = 3e-10
 Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 18/134 (13%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LV  N V    KI DFG +R    Q++        L   +MA E +    Y   +
Sbjct: 169 AARNILVGENYV---AKIADFGLSRG---QEVYVKKTMGRLPVRWMAIESLNYSVYTTNS 222

Query: 69  DLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           D+WS G +L+++V+ G  P+ G +   +L++ +     L  P    +E++    DL  +C
Sbjct: 223 DVWSYGVLLWEIVSLGGTPYCGMTCA-ELYEKLPQGYRLEKPLNCDDEVY----DLMRQC 277

Query: 126 LLRQNPVERITFKE 139
             R+ P ER +F +
Sbjct: 278 -WREKPYERPSFAQ 290

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 60.8 bits (148), Expect = 4e-10
 Identities = 38/172 (22%), Positives = 77/172 (44%), Gaps = 16/172 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPL---YMAPEIIQNHKYDAK 67
           A +N+L+++N V    K+ DFG  R L    + A T  G  +   + +PE I   K+ + 
Sbjct: 174 AARNILINSNLV---CKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSA 230

Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           +D+WS G +L+++++ G+ P+   +   + + +     L  P      L+     L   C
Sbjct: 231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCPAALY----QLMLDC 286

Query: 126 LLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPE 177
             +++   R  F++      L +L +   + +       +P   LL+ S  +
Sbjct: 287 -WQKDRNNRPKFEQI--VSILDKLIRNPGSLKIITSAAARPSNLLLDQSNVD 335

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 60.0 bits (146), Expect = 4e-10
 Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 15/135 (11%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPL---YMAPEIIQNHKYDAK 67
           A +NLL++T ++   +KIGDFG  R+L    D         +   + APE ++   +   
Sbjct: 148 AARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHA 204

Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTE-LRFPPGAIEELHPDCVDL-CR 124
           +D W  G  L+++ T G+ P+ G N  Q+   I    E L  P    ++++    ++  +
Sbjct: 205 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIY----NVMVQ 260

Query: 125 CLLRQNPVERITFKE 139
           C     P +R TF  
Sbjct: 261 C-WAHKPEDRPTFVA 274

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 59.9 bits (146), Expect = 5e-10
 Identities = 37/132 (28%), Positives = 61/132 (46%), Gaps = 12/132 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCG-SPL-YMAPEIIQNHKYDAKAD 69
           A +N+LVS+N+    +K+GDFG +R +          G  P+ +MAPE I   ++ + +D
Sbjct: 143 AARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASD 199

Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLL 127
           +W  G  +++++  G  PF G     +   I     L  PP     L+     L  +C  
Sbjct: 200 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLY----SLMTKC-W 254

Query: 128 RQNPVERITFKE 139
             +P  R  F E
Sbjct: 255 AYDPSRRPRFTE 266

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 60.8 bits (148), Expect = 5e-10
 Identities = 31/133 (23%), Positives = 60/133 (45%), Gaps = 18/133 (13%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N+LVS + V    K+ DFG  +     + + T     L   + APE ++  K+  K+
Sbjct: 316 AARNVLVSEDNV---AKVSDFGLTK-----EASSTQDTGKLPVKWTAPEALREKKFSTKS 367

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCL 126
           D+WS G +L+++ + G+ P+       +   +    ++  P G    ++    D+   C 
Sbjct: 368 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPAVY----DVMKNC- 422

Query: 127 LRQNPVERITFKE 139
              +   R TF +
Sbjct: 423 WHLDAATRPTFLQ 435

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 59.2 bits (144), Expect = 7e-10
 Identities = 34/133 (25%), Positives = 65/133 (48%), Gaps = 14/133 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPL---YMAPEIIQNHKYDAKA 68
           A +N LV+   V   +K+ DFG +R +   D   +  GS     +  PE++   K+ +K+
Sbjct: 147 AARNCLVNDQGV---VKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKS 202

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCL 126
           D+W+ G +++++ + GK P++     +  ++I     L  P  A E+++     +   C 
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASEKVY----TIMYSC- 257

Query: 127 LRQNPVERITFKE 139
             +   ER TFK 
Sbjct: 258 WHEKADERPTFKI 270

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 59.2 bits (144), Expect = 8e-10
 Identities = 33/154 (21%), Positives = 64/154 (41%), Gaps = 16/154 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L+         KI DFG +++L   D   T   +   PL + APE I   K+ ++
Sbjct: 137 AARNVLLVNRHY---AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 193

Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           +D+WS G  +++ ++ G+ P+      ++   I     +  PP    EL+     L   C
Sbjct: 194 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELY----ALMSDC 249

Query: 126 LLRQNPVERITFKEFFNHRFLGELRQTVHAEQHS 159
                  +R  F      + +     ++ ++   
Sbjct: 250 -WIYKWEDRPDFLTV--EQRMRACYYSLASKVEG 280

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 59.2 bits (144), Expect = 1e-09
 Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 14/134 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPL---YMAPEIIQNHKYDAK 67
           A +N+LV +N V    K+ DFG +R L    D A T  G  +   + APE I    + + 
Sbjct: 178 AARNVLVDSNLV---CKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSA 234

Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           +D+WS G ++++++  G+ P+       +  ++     L  P G    LH     L   C
Sbjct: 235 SDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPHALH----QLMLDC 290

Query: 126 LLRQNPVERITFKE 139
              ++  +R  F +
Sbjct: 291 -WHKDRAQRPRFSQ 303

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 59.3 bits (144), Expect = 1e-09
 Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 18/170 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD-TLCGSPL---YMAPEIIQNHKYDAK 67
           A +N+LV++N V    K+ DFG +R L     A  T  G  +   + APE I   K+ + 
Sbjct: 174 AARNILVNSNLV---CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSA 230

Query: 68  ADLWSVGAILFQLVT-GKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CR 124
           +D+WS G ++++++T G+ P+   SN  ++ + I     L  P      ++     L  +
Sbjct: 231 SDVWSFGIVMWEVMTYGERPYWELSNH-EVMKAINDGFRLPTPMDCPSAIY----QLMMQ 285

Query: 125 CLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSS 174
           C  +Q    R  F +      L +L +   + +     + +  + L ++S
Sbjct: 286 C-WQQERARRPKFADI--VSILDKLIRAPDSLKTLADFDPRVSIRLPSTS 332

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 58.0 bits (141), Expect = 2e-09
 Identities = 33/142 (23%), Positives = 58/142 (40%), Gaps = 32/142 (22%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLY------------MAPEII 59
           A +N+LV++ E    +K+GDFG +R +  +D          Y            M+PE I
Sbjct: 140 AVRNILVASPEC---VKLGDFGLSRYIEDED----------YYKASVTRLPIKWMSPESI 186

Query: 60  QNHKYDAKADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPD 118
              ++   +D+W     ++++++ GK PF       +   +     L  P      L+  
Sbjct: 187 NFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPDLCPPVLY-- 244

Query: 119 CVDL-CRCLLRQNPVERITFKE 139
              L  RC    +P +R  F E
Sbjct: 245 --TLMTRC-WDYDPSDRPRFTE 263

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 58.5 bits (142), Expect = 2e-09
 Identities = 38/162 (23%), Positives = 65/162 (40%), Gaps = 33/162 (20%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPL-YMAPEIIQNHKYDA 66
           A +N+LV        +KIGDFG  + L PQD           SP+ + APE +   K+  
Sbjct: 141 ATRNILVENENR---VKIGDFGLTKVL-PQDKEFFKVKEPGESPIFWYAPESLTESKFSV 196

Query: 67  KADLWSVGAILFQLVT----------------GKPPFDGSNQLQLFQNILTSTELRFPPG 110
            +D+WS G +L++L T                G           L + +  +  L  P G
Sbjct: 197 ASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDG 256

Query: 111 AIEELHPDCVDL-CRCLLRQNPVERITFKEFFNHRFLGELRQ 151
             +E++     +   C    N  +R +F++      + ++R 
Sbjct: 257 CPDEIY----MIMTEC-WNNNVNQRPSFRDL--ALRVDQIRD 291

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 58.0 bits (141), Expect = 2e-09
 Identities = 34/156 (21%), Positives = 66/156 (42%), Gaps = 17/156 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L+ T       KI DFG +++L   +           P+ + APE I  +K+ +K
Sbjct: 144 AARNVLLVTQHY---AKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSK 200

Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           +D+WS G ++++  + G+ P+ G    ++   +     +  P G   E++    DL   C
Sbjct: 201 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY----DLMNLC 256

Query: 126 LLRQNPVERITFKE---FFNHRFLGELRQTVHAEQH 158
               +   R  F        + +   + +  H   H
Sbjct: 257 -WTYDVENRPGFAAVELRLRNYYYDVVNEGHHHHHH 291

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 10/88 (11%), Positives = 25/88 (28%), Gaps = 9/88 (10%)

Query: 49  GSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP 108
             P  M          + + D+  +GA L+ L+  + P   +            T  +  
Sbjct: 171 AYPATMPDA-------NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPI 223

Query: 109 P--GAIEELHPDCVDLCRCLLRQNPVER 134
                  ++      +    ++ +   R
Sbjct: 224 EPADIDRDIPFQISAVAARSVQGDGGIR 251

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 39/182 (21%), Positives = 69/182 (37%), Gaps = 27/182 (14%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+LV +      +KI DFG A+ L       +      SP+ + APE + ++ +  +
Sbjct: 154 AARNILVESEAH---VKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQ 210

Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNI----LTSTELRFPPGAIEELH-----P 117
           +D+WS G +L++L T        S +              + L      +EE       P
Sbjct: 211 SDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRL---LELLEEGQRLPAPP 267

Query: 118 DCVDLCRCLLRQ----NPVERITFKEFFNHRFLGEL-RQTVHAEQHSVVPETKPMVELLN 172
            C      L++     +P +R +F        L  L   +   E H+     +     L+
Sbjct: 268 ACPAEVHELMKLCWAPSPQDRPSFSAL--GPQLDMLWSGSRGCETHAFTAHPEGKHHSLS 325

Query: 173 SS 174
            S
Sbjct: 326 FS 327

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 58.4 bits (141), Expect = 3e-09
 Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 14/134 (10%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS---PL-YMAPEIIQNHKYDAK 67
           A +N+L+         KI DFG +++L   D   T   +   PL + APE I   K+ ++
Sbjct: 463 AARNVLLVNRHY---AKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSR 519

Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRC 125
           +D+WS G  +++ ++ G+ P+      ++   I     +  PP    EL+     L   C
Sbjct: 520 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELY----ALMSDC 575

Query: 126 LLRQNPVERITFKE 139
                  +R  F  
Sbjct: 576 -WIYKWEDRPDFLT 588

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 57.4 bits (139), Expect = 4e-09
 Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 33/164 (20%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPL-YMAPEIIQNHKYDA 66
           A +N+LV        +KIGDFG  + L PQD           SP+ + APE +   K+  
Sbjct: 172 ATRNILVENENR---VKIGDFGLTKVL-PQDKEYYKVKEPGESPIFWYAPESLTESKFSV 227

Query: 67  KADLWSVGAILFQLVT----------------GKPPFDGSNQLQLFQNILTSTELRFPPG 110
            +D+WS G +L++L T                G           L + +  +  L  P G
Sbjct: 228 ASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDG 287

Query: 111 AIEELHPDCVDL-CRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
             +E++     +   C    N  +R +F++      + ++R  +
Sbjct: 288 CPDEIY----MIMTEC-WNNNVNQRPSFRDL--ALRVDQIRDQM 324

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 57.4 bits (139), Expect = 5e-09
 Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 12/132 (9%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGS-PL-YMAPEIIQNHKYDAKAD 69
              N+LVS + V    KI DFG AR +   +         P+ + APE I    +  K+D
Sbjct: 311 RAANILVSASLV---CKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSD 367

Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDL-CRCLL 127
           +WS G +L ++VT G+ P+ G +  ++ + +     +  P    EEL+    ++  RC  
Sbjct: 368 VWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELY----NIMMRC-W 422

Query: 128 RQNPVERITFKE 139
           +  P ER TF+ 
Sbjct: 423 KNRPEERPTFEY 434

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 56.8 bits (137), Expect = 6e-09
 Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 22/101 (21%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLAD---------TLCGSPLYMAPEIIQN--- 61
           +N+LV  +       I DFG +  LT   L           +  G+  YMAPE+++    
Sbjct: 149 RNVLVKNDGT---CVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVN 205

Query: 62  ----HKYDAKADLWSVGAILFQLV---TGKPPFDGSNQLQL 95
                    + D++++G I +++    T   P +   + Q+
Sbjct: 206 LRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 57.9 bits (139), Expect = 7e-09
 Identities = 90/625 (14%), Positives = 182/625 (29%), Gaps = 194/625 (31%)

Query: 60  QNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEEL--HP 117
             ++Y    D+ SV    F        FD  +   + ++IL+  E       I+ +    
Sbjct: 14  HQYQYK---DILSVFEDAF-----VDNFDCKDVQDMPKSILSKEE-------IDHIIMSK 58

Query: 118 DCVDLCRCL---LRQNPVERITFKEFF------NHRFLGELRQTVHAEQHSVVPETKPMV 168
           D V     L   L     E    ++F       N++FL      +  EQ      T+  +
Sbjct: 59  DAVSGTLRLFWTLLSKQEE--MVQKFVEEVLRINYKFLMS---PIKTEQRQPSMMTRMYI 113

Query: 169 E----LLNSSTPEDRHSLHSEHPTNS-----SSKNP-------------KS-----ACSS 201
           E    L N +    ++++    P            P             K+      C S
Sbjct: 114 EQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLS 173

Query: 202 ACDKVILNTGDQ------GNSLSTRDLHEFIPNMACDRMKKSVGSQYSSDQLKDLMESIE 255
              KV      +       N  S   + E +  +   ++  +  S+  SD   ++   I 
Sbjct: 174 --YKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL-LYQIDPNWTSR--SDHSSNIKLRIH 228

Query: 256 KEYVLINSHFASTDGFSFY------LDASLQDNSMAKV-SI-CPSKKNDHSAITMQTKDM 307
                +     S      Y      L  ++Q+       ++ C         I + T+  
Sbjct: 229 SIQAELRRLLKSKP----YENCLLVLL-NVQNAKAWNAFNLSCK--------ILLTTRFK 275

Query: 308 P-SDSASGA---ENSLFHVPAPLETSNRLFIL------------KEVQGLTVL------- 344
             +D  S A     SL H    L       +L            +EV             
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAE 335

Query: 345 ----HPSTGLQLLHQYVHALTELAEAKYDA-------------GLFLESFSVELVVLAI- 386
                 +T     H     LT + E+  +               +F  S  +  ++L++ 
Sbjct: 336 SIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLI 395

Query: 387 W----------------KKALQICGSWLTSMS-HG-----ELPGPSSAYGHTPV----QG 420
           W                K +L       +++S        ++   +    H  +      
Sbjct: 396 WFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNI 455

Query: 421 GISSDPNSENNVDFSSPFSVSTWAEQGFILAFDRAEKLSYNIRDSDGAAEMPDAMEIIYQ 480
             + D +     D   P+         +  +      + +++++ +   E      +++ 
Sbjct: 456 PKTFDSD-----DLIPPY------LDQYFYSH-----IGHHLKNIE-HPERMTLFRMVFL 498

Query: 481 --RALSVGKIGAVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPF-SLN-PSDKK 536
             R L   KI         +  ++A  +   +L +        L  Y P+   N P  ++
Sbjct: 499 DFRFLE-QKI---------RHDSTAWNASGSILNTLQQ-----LKFYKPYICDNDPKYER 543

Query: 537 RIQGYINNLQSHQSNFLIFQPSSNL 561
            +   ++ L   + N LI    ++L
Sbjct: 544 LVNAILDFLPKIEEN-LICSKYTDL 567

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 49.5 bits (117), Expect = 3e-06
 Identities = 61/428 (14%), Positives = 133/428 (31%), Gaps = 119/428 (27%)

Query: 209 NTGDQGNSLSTRDL-----HEFIPNMACDRMKKSVGSQYSSDQLKDLMES---IEKEYVL 260
            TG+       +D+       F+ N  C  ++    S  S +++  ++ S   +     L
Sbjct: 10  ETGEH--QYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL 67

Query: 261 INSHFAS-TDGFSFYLDASLQDNS---MAKVSICPSKKNDHSAITMQTKD-MPSDSASGA 315
             +  +   +    +++  L+ N    M+ +     + +  + + ++ +D + +D     
Sbjct: 68  FWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYND----- 122

Query: 316 ENSLF---HVPAP---LETSNRLFILKEVQGLTVLH--PSTGLQLLHQYVHALTELAEAK 367
            N +F   +V      L+    L  L+  + + ++     +G   +              
Sbjct: 123 -NQVFAKYNVSRLQPYLKLRQALLELRPAKNV-LIDGVLGSGKTWV-------------- 166

Query: 368 YDAGLFLESFSVELVVLAIWKKALQICGSWLT---SMSHGELPGPSSAYGHTPVQGGISS 424
             A     S+ V+       K   +I   WL      S   +        +         
Sbjct: 167 --ALDVCLSYKVQC------KMDFKI--FWLNLKNCNSPETVLEMLQKLLYQ-------I 209

Query: 425 DPNSENNVDFSSPFSVSTWAEQGFI--LAFDRAEKLSY----NIRDSDGAAEMPDAMEI- 477
           DPN  +  D SS   +   + Q  +  L   +  +       N+++    A+  +A  + 
Sbjct: 210 DPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN----AKAWNAFNLS 265

Query: 478 ----IYQRALSV---------GKIGAVEEYMG-NKASASALYSKAM-------------- 509
               +  R   V           I      M        +L  K +              
Sbjct: 266 CKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTT 325

Query: 510 --LLLSFIVGEAASLSLYP----PFSLNPSDKKR--IQGYINNLQS--HQSNFL---IFQ 556
               LS I   A S+         +     DK    I+  +N L+   ++  F    +F 
Sbjct: 326 NPRRLSII---AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFP 382

Query: 557 PSSNLSSD 564
           PS+++ + 
Sbjct: 383 PSAHIPTI 390

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 28/148 (18%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+LV +      +KIGDFG  +++              SP+ + APE +   K+   
Sbjct: 153 AARNVLVESEHQ---VKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIA 209

Query: 68  ADLWSVGAILFQLVT---------------GKPPFDGSNQLQLFQNILTSTELRFPPGAI 112
           +D+WS G  L +L+T                 P        +L   +     L  PP   
Sbjct: 210 SDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCP 269

Query: 113 EELHPDCVDL-CRCLLRQNPVERITFKE 139
           +E++     L  +C     P  R +F+ 
Sbjct: 270 DEVY----QLMRKC-WEFQPSNRTSFQN 292

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 53.9 bits (130), Expect = 4e-08
 Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 30/168 (17%)

Query: 12  ACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPL-YMAPEIIQNHKYDAK 67
           A +N+L+  + +   +KIGDFG A+++              SP+ + APE ++ +K+   
Sbjct: 161 AARNVLLDNDRL---VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYA 217

Query: 68  ADLWSVGAILFQLVT---------------GKPPFDGSNQLQLFQNILTSTELRFPPGAI 112
           +D+WS G  L++L+T                         L+L + +     L  P    
Sbjct: 218 SDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCP 277

Query: 113 EELHPDCVDL-CRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHS 159
            E++     L   C        R TF+       L  + +    +  S
Sbjct: 278 AEVY----HLMKNC-WETEASFRPTFENL--IPILKTVHEKYQGQAPS 318

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 53.8 bits (130), Expect = 5e-08
 Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 32/143 (22%)

Query: 12  ACQNLLVSTNEVT-----PVLKIGDFGFARSLTPQDLADTLCGSPLY-------MAPEII 59
             +N+L+   E       P +K+ D G + ++ P+D                  + PE I
Sbjct: 140 CAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD----------ILQERIPWVPPECI 189

Query: 60  QNHK-YDAKADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHP 117
           +N K  +   D WS G  L+++ + G  P    +  +  Q      +L  P  A  EL  
Sbjct: 190 ENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAPKAA--ELA- 246

Query: 118 DCVDL-CRCLLRQNPVERITFKE 139
              +L   C +   P  R +F+ 
Sbjct: 247 ---NLINNC-MDYEPDHRPSFRA 265

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 48.0 bits (115), Expect = 4e-06
 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 10/70 (14%)

Query: 28  KIGDFGFARSLTPQD------LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV 81
            +GDFG A+ +  +D      +  T+     ++APE +   K   K D++  G +L +L+
Sbjct: 174 VVGDFGLAKLMDYKDTHVTTAVRGTIG----HIAPEYLSTGKSSEKTDVFGYGVMLLELI 229

Query: 82  TGKPPFDGSN 91
           TG+  FD + 
Sbjct: 230 TGQRAFDLAR 239

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 46.4 bits (111), Expect = 1e-05
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 7/68 (10%)

Query: 28  KIGDFGFARSLTPQDLADT-----LCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT 82
           KI DFG ++  T  D   T     + G+  Y+ PE     +   K+D++S G +LF+++ 
Sbjct: 179 KITDFGISKKGTELD--QTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLC 236

Query: 83  GKPPFDGS 90
            +     S
Sbjct: 237 ARSAIVQS 244

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 46.4 bits (111), Expect = 1e-05
 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 8/68 (11%)

Query: 28  KIGDFGFARSLTPQDLADT-----LCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT 82
           KI DFG AR  + +  A T     + G+  YMAPE ++      K+D++S G +L +++T
Sbjct: 173 KISDFGLAR-ASEKF-AQTVMTSRIVGTTAYMAPEALRGEITP-KSDIYSFGVVLLEIIT 229

Query: 83  GKPPFDGS 90
           G P  D  
Sbjct: 230 GLPAVDEH 237

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	568
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.98
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.98
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.98
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.98
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.97
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.97
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.97
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.96
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.96
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.96
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.96
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.96
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.96
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.96
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.96
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.95
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.95
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.94
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.94
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.94
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.94
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.94
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.94
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.94
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.94
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.94
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.94
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.93
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.93
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.93
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.93
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.93
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.93
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.93
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.93
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.93
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.93
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.93
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.93
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.93
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.93
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.93
3niz_A	311	Rhodanese family protein; structural genomics, str	99.93
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.93
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.93
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.93
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.93
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.93
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.93
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.93
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.93
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.93
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.93
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.93
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.93
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.93
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.93
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.93
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.93
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.93
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.93
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.93
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.93
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.93
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.93
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.92
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.92
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.92
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.92
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.92
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.92
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.92
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.92
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.92
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.92
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.92
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.92
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.92
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.92
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.92
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.92
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.92
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.92
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.92
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.92
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.92
3bhy_A	283	Death-associated protein kinase 3; death associate	99.92
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.92
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.92
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.92
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.92
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.92
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.92
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.92
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.92
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.92
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.92
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.92
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.92
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.92
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.92
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.91
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.91
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.91
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.91
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.91
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.91
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.91
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.91
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.91
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.91
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.91
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.91
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.91
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.91
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.91
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.91
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.91
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.91
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.91
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.91
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.91
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.91
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.91
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.91
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.91
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.91
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.91
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.91
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.9
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.9
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.9
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.9
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.9
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.9
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.9
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.9
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.9
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.9
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.9
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.9
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.9
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.9
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.9
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.9
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.9
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.9
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.9
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.9
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.9
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.89
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.89
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.89
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.89
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.89
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.89
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.89
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.89
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.89
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.89
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.89
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.89
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.89
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.88
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.88
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.88
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.88
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.88
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.88
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.88
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.88
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.88
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.88
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.88
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.88
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.88
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.88
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.88
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.88
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.88
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.88
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.88
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.88
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.88
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.88
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.87
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.87
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.87
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.87
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.87
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.87
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.87
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.87
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.87
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.87
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.87
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.87
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.87
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.87
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.87
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.87
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.87
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.87
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.87
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.86
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.86
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.86
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.86
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.86
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.86
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.86
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.86
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.86
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.86
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.86
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.86
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.86
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.86
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.86
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.86
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.86
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.86
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.86
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.85
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.85
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.85
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.85
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.85
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.85
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.85
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.85
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.85
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.85
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.85
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.85
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.84
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.84
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.84
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.84
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.84
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.84
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.84
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.83
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.83
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.83
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.82
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.81
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.78
3uqc_A	286	Probable conserved transmembrane protein; structur	99.62
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.49
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.04
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.45
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.75
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	96.13
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	96.03
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	94.98
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	93.07
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	92.76
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	90.9
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	88.06
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	87.4
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	87.12
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	86.5
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	85.94
3ats_A	357	Putative uncharacterized protein; hypothetical pro	85.73
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	85.44
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	82.77
2cpt_A	117	SKD1 protein, vacuolar sorting protein 4B; MIT, he	81.04

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.98  E-value=3.5e-33  Score=293.16  Aligned_cols=144  Identities=26%  Similarity=0.533  Sum_probs=126.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..|||||||||+||||+.++   .+||+|||+|+.+... ....+.+||+.|||||++.+..|+.++||||+||++||
T Consensus       186 lH~~~IiHRDlKp~NILl~~~g---~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilye  262 (346)
T 4fih_A          186 LHAQGVIHRDIKSDSILLTHDG---RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE  262 (346)
T ss_dssp             HHHTTEECCCCSGGGEEECTTC---CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             HHHCCcccccCCHHHEEECCCC---CEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHH
Confidence            3557999999999999999887   7999999999987643 45667899999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++|++||.+.+..+.+..+.......+  ..+..+++++++||.+||..||.+|||++|+++||||.+.
T Consensus       263 ml~G~~PF~~~~~~~~~~~i~~~~~~~~--~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~  330 (346)
T 4fih_A          263 MVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA  330 (346)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSSCCCC--SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHHCCCCCCCcCHHHHHHHHHcCCCCCC--CccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCC
Confidence            9999999999999888888876533222  2345789999999999999999999999999999999754

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.98  E-value=2.3e-33  Score=290.59  Aligned_cols=145  Identities=30%  Similarity=0.557  Sum_probs=127.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---CCCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+||||||||+|||++.++   .+||+|||+|+.+...   ....+.|||+.|||||++.+..|+.++||||+||++
T Consensus       148 lH~~~IiHRDlKPeNILl~~~g---~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvil  224 (311)
T 4aw0_A          148 LHGKGIIHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII  224 (311)
T ss_dssp             HHHTTEECSCCSGGGEEECTTS---CEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHH
T ss_pred             HHHCCCccCCCCHHHeEEcCCC---CEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHH
Confidence            3567999999999999999877   7999999999987533   345678999999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHH------HHhchhHHHhHH
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE------FFNHRFLGELRQ  151 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeE------lL~Hpff~~~~~  151 (568)
                      |+|++|++||.+.+..+++.+|... .+.+|    ..+++++++||.+||..||.+|||++|      +++||||+.+.|
T Consensus       225 yeml~G~~PF~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw  299 (311)
T 4aw0_A          225 YQLVAGLPPFRAGNEGLIFAKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW  299 (311)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHT-CCCCC----TTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcC-CCCCC----cccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCH
Confidence            9999999999999999998888765 44444    367899999999999999999999887      689999988876


Q ss_pred             hh
Q 008370          152 TV  153 (568)
Q Consensus       152 ~~  153 (568)
                      ..
T Consensus       300 ~~  301 (311)
T 4aw0_A          300 EN  301 (311)
T ss_dssp             TT
T ss_pred             HH
Confidence            53

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.98  E-value=6.9e-33  Score=282.34  Aligned_cols=140  Identities=31%  Similarity=0.560  Sum_probs=111.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCC-CcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKY-DAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~y-s~ksDIWSlGviL~E   79 (568)
                      ||..|||||||||+|||++.++   .+||+|||+|+.........+.+||+.|||||++.+..| +.++||||+||++|+
T Consensus       128 lH~~~IiHRDiKP~NILl~~~~---~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~  204 (275)
T 3hyh_A          128 CHRHKIVHRDLKPENLLLDEHL---NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYV  204 (275)
T ss_dssp             HHHTTCCCCCCCTTTEEECTTC---CEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHH
T ss_pred             HHHCCcccccCChHHeEECCCC---CEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHH
Confidence            3567999999999999999877   699999999998776666778899999999999998876 578999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      |++|+.||.+.+..+++..+... ...+|    ..+++++++||.+||+.||.+|||++|+++||||+.
T Consensus       205 lltg~~PF~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          205 MLCRRLPFDDESIPVLFKNISNG-VYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHT-CCCCC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHT
T ss_pred             HHHCCCCCCCCCHHHHHHHHHcC-CCCCC----CCCCHHHHHHHHHHccCChhHCcCHHHHHcCccccc
Confidence            99999999999888888877654 34444    367899999999999999999999999999999953

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.98  E-value=6.3e-33  Score=286.49  Aligned_cols=146  Identities=28%  Similarity=0.565  Sum_probs=126.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..|||||||||+|||++.++   .+||+|||+|+.... .....+.+||+.|||||++.+..|+.++||||+||++||
T Consensus       142 lH~~~IiHRDlKp~NILl~~~g---~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilye  218 (304)
T 3ubd_A          142 LHSLGIIYRDLKPENILLDEEG---HIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFE  218 (304)
T ss_dssp             HHHTTCCCSSCCGGGEEECTTS---CEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHH
T ss_pred             HHHCCCcCCCCCHHHeEEcCCC---CEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHH
Confidence            3567999999999999999887   699999999987543 345667899999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHhhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~~~  154 (568)
                      |++|++||.+.+..+++.++... .+.+|    ..+++++.+||.+||+.||.+|||     ++|+++||||+.+.|...
T Consensus       219 mltG~~PF~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l  293 (304)
T 3ubd_A          219 MLTGTLPFQGKDRKETMTMILKA-KLGMP----QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKL  293 (304)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHC-CCCCC----TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHH
T ss_pred             HHhCCCCCCCcCHHHHHHHHHcC-CCCCC----CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCHHHH
Confidence            99999999999999998888765 33444    468999999999999999999998     589999999998876543

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.97  E-value=2.4e-32  Score=293.72  Aligned_cols=144  Identities=26%  Similarity=0.533  Sum_probs=126.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..|||||||||+||||+.++   .+||+|||+|+.+... ....+.|||+.|||||++.+..|+.++|||||||++||
T Consensus       263 lH~~~IiHRDiKp~NILl~~~g---~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilye  339 (423)
T 4fie_A          263 LHAQGVIHRDIKSDSILLTHDG---RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIE  339 (423)
T ss_dssp             HHHTTEECCCCSTTTEEECTTC---CEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             HHHCCeecccCCHHHEEEcCCC---CEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHH
Confidence            3557999999999999999887   7999999999987543 45667899999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++|++||.+.+..+.+..|.......+  ..+..+++++++||.+||..||.+|||++|+++||||.+.
T Consensus       340 ml~G~~PF~~~~~~~~~~~i~~~~~~~~--~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          340 MVDGEPPYFNEPPLKAMKMIRDNLPPRL--KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA  407 (423)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHSCCCCC--SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HHHCCCCCCCcCHHHHHHHHHcCCCCCC--cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence            9999999999999888888876543322  2345789999999999999999999999999999999754

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.97  E-value=4.6e-33  Score=292.66  Aligned_cols=140  Identities=26%  Similarity=0.526  Sum_probs=123.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..|||||||||+||||+.++   .+||+|||+|+.+... ....+.+||+.|||||++.+..|+.++|||||||++|||
T Consensus       142 H~~~IiHRDlKp~NILl~~~g---~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyem  218 (350)
T 4b9d_A          142 HDRKILHRDIKSQNIFLTKDG---TVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL  218 (350)
T ss_dssp             HHTTCEETTCCGGGEEECTTC---CEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             HHCCeeeccCCHHHEEECCCC---CEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHH
Confidence            557999999999999999877   6999999999876543 234567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ++|++||.+.+..+++.++........    +..+++++.+||.+||..||.+|||++|+++||||.+
T Consensus       219 ltG~~PF~~~~~~~~~~~i~~~~~~~~----~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          219 CTLKHAFEAGSMKNLVLKIISGSFPPV----SLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHTCCCCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHT
T ss_pred             HHCCCCCCCcCHHHHHHHHHcCCCCCC----CccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhc
Confidence            999999999999999888887643322    3468899999999999999999999999999999975

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.97  E-value=4.4e-32  Score=278.45  Aligned_cols=136  Identities=26%  Similarity=0.536  Sum_probs=111.5

Q ss_pred             CeEecCCCCCCeEEec-CCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhC
Q 008370            5 FMIVSANACQNLLVST-NEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG   83 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~-~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG   83 (568)
                      +||||||||+||||+. ++   .+||+|||+|+... .....+.+||+.|||||++.+ +|+.++|||||||++|||++|
T Consensus       151 ~IiHRDlKp~NILl~~~~g---~vKl~DFGla~~~~-~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg  225 (290)
T 3fpq_A          151 PIIHRDLKCDNIFITGPTG---SVKIGDLGLATLKR-ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATS  225 (290)
T ss_dssp             CCCCCCCCGGGEEESSTTS---CEEECCTTGGGGCC-TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHS
T ss_pred             CEEecccChhheeEECCCC---CEEEEeCcCCEeCC-CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHC
Confidence            3999999999999974 44   69999999998643 345667899999999999865 699999999999999999999


Q ss_pred             CCCCCCCcHHH-HHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           84 KPPFDGSNQLQ-LFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        84 ~~PF~g~~~~~-~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ++||.+..... ++..+... .  .|+..+...++++.+||.+||..||.+|||++|+++||||++
T Consensus       226 ~~Pf~~~~~~~~~~~~i~~~-~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          226 EYPYSECQNAAQIYRRVTSG-V--KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             SCTTTTCSSHHHHHHHHTTT-C--CCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             CCCCCCCCcHHHHHHHHHcC-C--CCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence            99998765444 44444332 1  233334567889999999999999999999999999999964

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.96  E-value=1.5e-31  Score=279.69  Aligned_cols=139  Identities=23%  Similarity=0.338  Sum_probs=114.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC------CCccccCCCcccChhhhccCCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD------LADTLCGSPLYMAPEIIQNHKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~------~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlG   74 (568)
                      ||..+||||||||+||||+.++.  .+||+|||+|+.+....      ...+++||+.|||||++.+..|+.++||||||
T Consensus       166 lH~~~IiHRDlKp~NILl~~~g~--~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlG  243 (336)
T 4g3f_A          166 LHTRRILHGDVKADNVLLSSDGS--RAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC  243 (336)
T ss_dssp             HHTTTEECSCCCGGGEEECTTSC--CEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHH
T ss_pred             HHHCCceecccCHHHEEEeCCCC--EEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHH
Confidence            46679999999999999988753  59999999999875432      22456899999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++|||++|++||.+.+..+++.++...... + ...+..+++.+.+||.+||..||.+|||+.|+++|
T Consensus       244 vilyemltG~~Pf~~~~~~~~~~~i~~~~~~-~-~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~  310 (336)
T 4g3f_A          244 CMMLHMLNGCHPWTQYFRGPLCLKIASEPPP-I-REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRK  310 (336)
T ss_dssp             HHHHHHHHSSCSSTTTCCSCCHHHHHHSCCG-G-GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHCcCCCCCCCHHHHHHHHHcCCCC-c-hhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            9999999999999988777777777664321 1 12345789999999999999999999999999876

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.96  E-value=1.7e-30  Score=274.24  Aligned_cols=147  Identities=26%  Similarity=0.425  Sum_probs=111.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----------------------------CCccccCCC
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----------------------------LADTLCGSP   51 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----------------------------~~~t~~GT~   51 (568)
                      ||..|||||||||+|||++.+.  +.+||+|||+|+......                             ...+.+||+
T Consensus       133 lH~~gIiHRDiKPeNiLl~~~~--~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~  210 (361)
T 4f9c_A          133 IHQFGIVHRDVKPSNFLYNRRL--KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTP  210 (361)
T ss_dssp             HHHTTEECSCCSGGGEEEETTT--TEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCG
T ss_pred             HHHCCeEeCcCCHHHeEEeCCC--CeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCc
Confidence            4567999999999999998763  279999999998654221                             234568999


Q ss_pred             cccChhhhccC-CCCcccchhhHHHHHHHHHhCCCCCCC-CcHHHHHHHHHhcc--------------------------
Q 008370           52 LYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKPPFDG-SNQLQLFQNILTST--------------------------  103 (568)
Q Consensus        52 ~YmAPEvl~~~-~ys~ksDIWSlGviL~ELltG~~PF~g-~~~~~~~~~Il~~~--------------------------  103 (568)
                      .|||||++.+. .|+.++||||+||++|||++|+.||.+ .+..+.+..|....                          
T Consensus       211 ~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~  290 (361)
T 4f9c_A          211 GFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQD  290 (361)
T ss_dssp             GGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCC
T ss_pred             cccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchh
Confidence            99999999775 589999999999999999999999964 44444444443200                          


Q ss_pred             -----------CCCCC------------CCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370          104 -----------ELRFP------------PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       104 -----------~~~~p------------~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                                 ....|            ...+..++++++|||.+||..||.+|+|++|+++||||+++
T Consensus       291 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          291 LRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             HHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             hhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence                       00000            11234578899999999999999999999999999999764

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.96  E-value=2.4e-30  Score=276.60  Aligned_cols=147  Identities=31%  Similarity=0.477  Sum_probs=120.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-----CCCCccccCCCcccChhhhccC-CCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-----QDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-----~~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlG   74 (568)
                      ||..|||||||||+|||++.++   .+||+|||+|+.+..     .....+.+||+.|||||++.+. .|+.++||||+|
T Consensus       174 lH~~~iiHRDlKP~NIl~~~~~---~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG  250 (398)
T 4b99_A          174 MHSAQVIHRDLKPSNLLVNENC---ELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVG  250 (398)
T ss_dssp             HHHTTCBCCCCCGGGEEECTTC---CEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHH
T ss_pred             HHHCcCcCCCcCccccccCCCC---CEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhH
Confidence            3567999999999999999877   699999999987643     2245578999999999998775 568999999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCC-------------------CCCC-------cccccCHHHHHHHHHhhc
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELR-------------------FPPG-------AIEELHPDCVDLCRCLLR  128 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~-------------------~p~~-------~~~~ls~~~~dLI~~cL~  128 (568)
                      |++|||++|++||.+.+..+.+..|.......                   ++..       ....+++++++||.+||.
T Consensus       251 ~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~  330 (398)
T 4b99_A          251 CIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLR  330 (398)
T ss_dssp             HHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSC
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCc
Confidence            99999999999999999888888776432110                   1110       112467899999999999


Q ss_pred             cCCCCCCCHHHHHhchhHHHhH
Q 008370          129 QNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus       129 ~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      .||.+|||++|+|+||||.+..
T Consensus       331 ~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          331 FEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             SSTTTSCCHHHHTTSGGGTTTC
T ss_pred             CChhHCcCHHHHhcCHhhCcCC
Confidence            9999999999999999997653

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.96  E-value=1.8e-29  Score=261.05  Aligned_cols=139  Identities=22%  Similarity=0.322  Sum_probs=109.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---CCCccccCCCcccChhhhcc---CCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---DLADTLCGSPLYMAPEIIQN---HKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---~~~~t~~GT~~YmAPEvl~~---~~ys~ksDIWSlGv   75 (568)
                      |..+||||||||+||||+.++   .+||+|||+|+.....   ....+.+||+.|||||++.+   .+|+.++|||||||
T Consensus       149 H~~~IiHRDlKp~NILl~~~~---~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gv  225 (307)
T 3omv_A          149 HAKNIIHRDMKSNNIFLHEGL---TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGI  225 (307)
T ss_dssp             HHTTCBCSCCCSSSEEEETTE---EEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHH
T ss_pred             HHCCccCCccCHHHEEECCCC---cEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHH
Confidence            456999999999999999877   7999999999876432   23456799999999999964   46899999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ++|||++|+.||.+.+....+..++... ..+..+..+..+++.+.+||.+||+.||++|||+.|++++
T Consensus       226 vl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          226 VLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             HHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            9999999999999877665555444432 2222234456788999999999999999999999999765

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.96  E-value=8.1e-30  Score=284.38  Aligned_cols=148  Identities=25%  Similarity=0.439  Sum_probs=131.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..+|+||||||+|||++.+. .+.+||+|||+|+.+.......+.+||+.|||||++.+..|+.++||||+||++|+|
T Consensus       271 lH~~~iiHRDlKp~Nill~~~~-~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyem  349 (573)
T 3uto_A          271 MHENNYVHLDLKPENIMFTTKR-SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL  349 (573)
T ss_dssp             HHHTTEECCCCCGGGEEESSSS-CCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHH
T ss_pred             HHHCCeeeccCChhhccccCCC-CCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHH
Confidence            3567999999999999998652 237999999999998877777788999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|.+||.+.+..+++.+|... ...++...+..+++++++||.+||..||.+|||++|+++||||+...
T Consensus       350 l~G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~  418 (573)
T 3uto_A          350 LSGLSPFGGENDDETLRNVKSC-DWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN  418 (573)
T ss_dssp             HHSCCSSCCSSHHHHHHHHHTT-CCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCC
T ss_pred             HHCCCCCCCcCHHHHHHHHHhC-CCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCC
Confidence            9999999999999988888764 44556666678899999999999999999999999999999997543

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.96  E-value=7.7e-30  Score=262.72  Aligned_cols=141  Identities=26%  Similarity=0.446  Sum_probs=121.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+||||||||+||||+.++   ++||+|||+|+.......   ....+||+.|||||++.+..|+.++|||||||++|
T Consensus       145 H~~~iiHRDlKp~NILl~~~~---~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~  221 (299)
T 4asz_A          145 ASQHFVHRDLATRNCLVGENL---LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLW  221 (299)
T ss_dssp             HHTTCCCSCCSGGGEEECGGG---CEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HhCCcccCccCHhhEEECCCC---cEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHH
Confidence            456999999999999999887   799999999987654332   23457999999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      ||+| |+.||.+.+..+.+..+..+..+..|    ..+++++.+||.+||+.||.+|||++++  |+|++.+..
T Consensus       222 Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p----~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~~~~~  289 (299)
T 4asz_A          222 EIFTYGKQPWYQLSNNEVIECITQGRVLQRP----RTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQNLAK  289 (299)
T ss_dssp             HHHTTTCCTTTTSCHHHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHHHHHH
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHHcCCCCCCC----ccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHHHHHh
Confidence            9998 99999999998888888776554444    3678899999999999999999999999  678876643

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.96  E-value=3e-29  Score=282.48  Aligned_cols=147  Identities=26%  Similarity=0.454  Sum_probs=123.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc-cCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ-NHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~-~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..|||||||||+||||+.++   +|||+|||+|+.+... ...+.|||+.|||||++. +..|+.++||||+||++||
T Consensus       308 LH~~gIiHRDLKPeNILld~~G---~vKL~DFGlA~~~~~~-~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYE  383 (689)
T 3v5w_A          308 MHNRFVVYRDLKPANILLDEHG---HVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK  383 (689)
T ss_dssp             HHTTTEECCCCSGGGEEECTTS---CEEECCCTTCEECSSC-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHH
T ss_pred             HHHCCccccCCchHHeEEeCCC---CEEecccceeeecCCC-CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence            4678999999999999999887   7999999999887543 456789999999999996 4689999999999999999


Q ss_pred             HHhCCCCCCCCc---HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHH
Q 008370           80 LVTGKPPFDGSN---QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQ  151 (568)
Q Consensus        80 LltG~~PF~g~~---~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~  151 (568)
                      |++|.+||.+.+   ..++...+... ...+|    ..+++++++||.+||..||.+|++     ++|+++||||+.+.|
T Consensus       384 mLtG~~PF~~~~~~~~~~i~~~i~~~-~~~~p----~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW  458 (689)
T 3v5w_A          384 LLRGHSPFRQHKTKDKHEIDRMTLTM-AVELP----DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDW  458 (689)
T ss_dssp             HHHSSCTTCGGGCCCHHHHHHHHHHC-CCCCC----TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCH
T ss_pred             HHhCCCCCCCCChHHHHHHHHhhcCC-CCCCC----ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCH
Confidence            999999997643   33444444433 33343    468999999999999999999998     799999999999988


Q ss_pred             hhhhh
Q 008370          152 TVHAE  156 (568)
Q Consensus       152 ~~~~~  156 (568)
                      .....
T Consensus       459 ~~l~~  463 (689)
T 3v5w_A          459 QMVFL  463 (689)
T ss_dssp             HHHHT
T ss_pred             HHHHc
Confidence            76543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.96  E-value=5.6e-30  Score=263.64  Aligned_cols=140  Identities=25%  Similarity=0.497  Sum_probs=104.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-------------CCccccCCCcccChhhhccCCCCcc
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-------------LADTLCGSPLYMAPEIIQNHKYDAK   67 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-------------~~~t~~GT~~YmAPEvl~~~~ys~k   67 (568)
                      ||..|||||||||+|||++.++   ++||+|||+|+.+....             ...+.+||+.|||||++.+..|+.+
T Consensus       134 lH~~~IiHRDlKp~NILl~~~~---~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~  210 (299)
T 4g31_A          134 LHSKGLMHRDLKPSNIFFTMDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHK  210 (299)
T ss_dssp             HHHTTCCCCCCCGGGEEECTTC---CEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTH
T ss_pred             HHHCcCccccCcHHHeEECCCC---cEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCH
Confidence            3557999999999999999887   79999999998765332             1234689999999999999999999


Q ss_pred             cchhhHHHHHHHHHhCCCCCCCCcHH-HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           68 ADLWSVGAILFQLVTGKPPFDGSNQL-QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        68 sDIWSlGviL~ELltG~~PF~g~~~~-~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      +|||||||++|||++   ||.+.... ..+..+.   ...+|+ .+...++.+.+||.+||+.||.+|||+.|+++||||
T Consensus       211 ~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~---~~~~p~-~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~  283 (299)
T 4g31_A          211 VDIFSLGLILFELLY---PFSTQMERVRTLTDVR---NLKFPP-LFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVF  283 (299)
T ss_dssp             HHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHH---TTCCCH-HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHcc---CCCCccHHHHHHHHHh---cCCCCC-CCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhh
Confidence            999999999999996   78654322 2233332   223332 234557788999999999999999999999999999


Q ss_pred             HHhH
Q 008370          147 GELR  150 (568)
Q Consensus       147 ~~~~  150 (568)
                      +.+.
T Consensus       284 ~~~~  287 (299)
T 4g31_A          284 EDLD  287 (299)
T ss_dssp             CCC-
T ss_pred             CCCC
Confidence            7654

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.96  E-value=2.5e-29  Score=262.25  Aligned_cols=135  Identities=27%  Similarity=0.476  Sum_probs=110.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+||||||||+||||+.++   ++||+|||+|+.+....   .....+||+.|||||++.+..|+.++|||||||++|
T Consensus       175 H~~~iiHRDLKp~NILl~~~~---~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~  251 (329)
T 4aoj_A          175 AGLHFVHRDLATRNCLVGQGL---VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLW  251 (329)
T ss_dssp             HHTTCCCSCCCGGGEEEETTT---EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             hcCCeecccccHhhEEECCCC---cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHH
Confidence            456999999999999999877   79999999998765432   234568999999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ||+| |+.||.+.+..+.+..+..+..+..|    ..+++++.+||.+||+.||++|||++||+++
T Consensus       252 Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p----~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          252 EIFTYGKQPWYQLSNTEAIDCITQGRELERP----RACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             HHHTTSCCTTCSSCHHHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHHcCCCCCCc----ccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            9999 99999999988888888776555444    3678999999999999999999999999654

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.95  E-value=2.3e-29  Score=260.16  Aligned_cols=135  Identities=24%  Similarity=0.375  Sum_probs=116.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+||||||||+||||+.++   .+||+|||+|+.+....   .....+||+.|||||++.+..|+.++|||||||++|
T Consensus       162 H~~~iiHRDLK~~NILl~~~~---~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~  238 (308)
T 4gt4_A          162 SSHHVVHKDLATRNVLVYDKL---NVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLW  238 (308)
T ss_dssp             HHTTCCCSCCSGGGEEECGGG---CEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCccccceEECCCC---CEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHH
Confidence            446899999999999999877   79999999998764332   345678999999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ||+| |..||.+.+..+....+..+..++.|    ..+++.+.+||.+||+.||.+|||+.||+++
T Consensus       239 El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p----~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          239 EVFSYGLQPYCGYSNQDVVEMIRNRQVLPCP----DDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HHHTTTCCTTTTCCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCc----ccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            9998 89999999998888888765544443    4678899999999999999999999999654

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.95  E-value=4.4e-29  Score=262.85  Aligned_cols=135  Identities=28%  Similarity=0.470  Sum_probs=113.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+||||||||+|||++.++   ++||+|||+|+.+....   ...+.+||+.|||||++.+..|+.++|||||||++|
T Consensus       202 H~~~iiHRDLK~~NILl~~~~---~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~  278 (353)
T 4ase_A          202 ASRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW  278 (353)
T ss_dssp             HHTTCCCSCCSGGGEEECGGG---CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             hhCCeecCccCccceeeCCCC---CEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHH
Confidence            456899999999999999887   79999999999765433   234568999999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHH-HHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~-~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ||+| |+.||.+.+..+.+ ..+..+..+..|    ..+++++.+||.+||+.||.+|||+.|+++|
T Consensus       279 El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p----~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          279 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            9998 99999987644444 444444344444    3678999999999999999999999999988

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.94  E-value=2.2e-27  Score=249.25  Aligned_cols=147  Identities=24%  Similarity=0.502  Sum_probs=129.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++.++....+||+|||+++...........+||+.|+|||++.+..|+.++|||||||++|+|+
T Consensus       145 H~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  224 (362)
T 2bdw_A          145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL  224 (362)
T ss_dssp             HHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             HHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHH
Confidence            45699999999999999877655679999999998877655566789999999999999989999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +|.+||.+.+..+.+..+... ...++...+..+++++.+||.+||..||.+||++.++++||||...
T Consensus       225 ~g~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  291 (362)
T 2bdw_A          225 VGYPPFWDEDQHRLYAQIKAG-AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR  291 (362)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHT-CCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTH
T ss_pred             HCCCCCCCCCHHHHHHHHHhC-CCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcccCCC
Confidence            999999998888887777654 4555655667889999999999999999999999999999999753

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.94  E-value=8.3e-28  Score=252.20  Aligned_cols=145  Identities=28%  Similarity=0.565  Sum_probs=121.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++... ......+.+||+.|+|||++.+..|+.++||||+||++|+|
T Consensus       141 H~~givHrDlkp~NILl~~~g---~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  217 (353)
T 3txo_A          141 HDKGIIYRDLKLDNVLLDHEG---HCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEM  217 (353)
T ss_dssp             HHTTCBCCCCCGGGEEECTTS---CEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHH
T ss_pred             HHCCCcccCCCHHHEEECCCC---CEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHH
Confidence            557999999999999999877   79999999998643 23345678999999999999988999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH------HHHHhchhHHHhHHhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF------KEFFNHRFLGELRQTVH  154 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa------eElL~Hpff~~~~~~~~  154 (568)
                      ++|+.||.+.+..+.+..+... ...+|    ..+++++.+||++||..||.+||++      +++++||||..+.|...
T Consensus       218 l~G~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~~l  292 (353)
T 3txo_A          218 LCGHAPFEAENEDDLFEAILND-EVVYP----TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQL  292 (353)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHC-CCCCC----TTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHHHH
T ss_pred             HhCCCCCCCCCHHHHHHHHHcC-CCCCC----CCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCHHHH
Confidence            9999999999998888888765 33444    3578999999999999999999998      89999999999877644

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.94  E-value=3.9e-27  Score=245.55  Aligned_cols=145  Identities=29%  Similarity=0.616  Sum_probs=126.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++... ......+.+||+.|+|||++.+..|+.++|||||||++|+|
T Consensus       122 H~~~ivHrDlkp~NIll~~~g---~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  198 (337)
T 1o6l_A          122 HSRDVVYRDIKLENLMLDKDG---HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM  198 (337)
T ss_dssp             HHTTCBCCCCCGGGEEECTTS---CEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHH
T ss_pred             HHCCeecCcCCHHHEEECCCC---CEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHH
Confidence            557999999999999999877   79999999998643 33445678999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~~~  154 (568)
                      ++|+.||.+.+..+.+..+... ...+|    ..+++++.+||.+||..||.+||     +++|+++||||..+.|...
T Consensus       199 l~g~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~~~~~  272 (337)
T 1o6l_A          199 MCGRLPFYNQDHERLFELILME-EIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDV  272 (337)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHC-CCCCC----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHH
T ss_pred             hcCCCCCCCCCHHHHHHHHHcC-CCCCC----CCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCCHHHH
Confidence            9999999998888888777654 33444    36789999999999999999999     8999999999998876543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.94  E-value=2.2e-27  Score=249.89  Aligned_cols=148  Identities=24%  Similarity=0.427  Sum_probs=128.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCC-CCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEV-TPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~-~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++. ...+||+|||+++...........+||+.|+|||++.+..|+.++||||+||++|+|
T Consensus       132 H~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~l  211 (361)
T 2yab_A          132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL  211 (361)
T ss_dssp             HHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             HHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHH
Confidence            4569999999999999987652 236999999999987766666778999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|..||.+.+..+.+..+... ...+++..+..+++.+++||.+||..||.+|||++|+++||||....
T Consensus       212 l~g~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~  280 (361)
T 2yab_A          212 LSGASPFLGDTKQETLANITAV-SYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (361)
T ss_dssp             HHSCCSSCCSSHHHHHHHHHTT-CCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCSS
T ss_pred             HhCCCCCCCCCHHHHHHHHHhc-CCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCCc
Confidence            9999999999988888877654 44555555567899999999999999999999999999999997554

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.94  E-value=3.7e-27  Score=239.75  Aligned_cols=145  Identities=25%  Similarity=0.388  Sum_probs=120.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++...........+||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       137 H~~~ivH~Dlkp~Nil~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~  213 (308)
T 3g33_A          137 HANCIVHRDLKPENILVTSGG---TVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF  213 (308)
T ss_dssp             HHTTCCCSCCCTTTEEECTTS---CEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTT
T ss_pred             HHCCcccCCCCHHHEEEcCCC---CEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHH
Confidence            556999999999999998877   69999999998776655666788999999999999999999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCC----------------------cccccCHHHHHHHHHhhccCCCCCCCHHH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPG----------------------AIEELHPDCVDLCRCLLRQNPVERITFKE  139 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~----------------------~~~~ls~~~~dLI~~cL~~dP~~RpTaeE  139 (568)
                      +|++||.+.+..+.+..+...........                      ....+++.+.+||.+||..||.+|||+.|
T Consensus       214 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  293 (308)
T 3g33_A          214 RRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFR  293 (308)
T ss_dssp             TSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHH
Confidence            99999999988877777654321111000                      11356789999999999999999999999


Q ss_pred             HHhchhHHHh
Q 008370          140 FFNHRFLGEL  149 (568)
Q Consensus       140 lL~Hpff~~~  149 (568)
                      +++||||...
T Consensus       294 ~l~h~~~~~~  303 (308)
T 3g33_A          294 ALQHSYLHKD  303 (308)
T ss_dssp             HHTSTTC---
T ss_pred             HhcCccccCC
Confidence            9999999764

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.94  E-value=5.2e-27  Score=246.29  Aligned_cols=145  Identities=26%  Similarity=0.597  Sum_probs=126.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++... ......+.+||+.|+|||++.+..|+.++|||||||++|||
T Consensus       138 H~~givHrDlkp~NIll~~~g---~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  214 (353)
T 2i0e_A          138 QSKGIIYRDLKLDNVMLDSEG---HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM  214 (353)
T ss_dssp             HHTTCBCCCCCGGGEEECTTS---CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHH
T ss_pred             HHCCEEeccCCHHHEEEcCCC---cEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHH
Confidence            557999999999999999877   79999999998643 33345678999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~~~  154 (568)
                      ++|+.||.+.+..+++..+... ...+|    ..+++++.+||.+||..||.+||+     ++++++||||..+.|...
T Consensus       215 l~G~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w~~l  288 (353)
T 2i0e_A          215 LAGQAPFEGEDEDELFQSIMEH-NVAYP----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKL  288 (353)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHC-CCCCC----TTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCHHHH
T ss_pred             HcCCCCCCCCCHHHHHHHHHhC-CCCCC----CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCHHHH
Confidence            9999999999988888888765 33444    367899999999999999999994     699999999998877644

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.94  E-value=3.4e-27  Score=244.77  Aligned_cols=140  Identities=35%  Similarity=0.673  Sum_probs=122.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCC-cccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYD-AKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys-~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++...........+||+.|+|||++.+..+. .++||||+||++|+|
T Consensus       131 H~~~ivHrDlkp~NIll~~~~---~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el  207 (328)
T 3fe3_A          131 HQKRIVHRDLKAENLLLDADM---NIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTL  207 (328)
T ss_dssp             HHTTCCCSCCCGGGEEECTTS---CEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHH
T ss_pred             HHCCEeccCCCHHHEEEcCCC---CEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHH
Confidence            556999999999999999877   6999999999887766666778999999999999888775 789999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++|+.||.+.+..+....+... ...+|    ..+++++.+|+++||..||.+|||++|+++||||...
T Consensus       208 l~g~~pf~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~  271 (328)
T 3fe3_A          208 VSGSLPFDGQNLKELRERVLRG-KYRIP----FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAG  271 (328)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHC-CCCCC----TTSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTT
T ss_pred             HhCCCCCCCCCHHHHHHHHHhC-CCCCC----CCCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCC
Confidence            9999999999988888777665 33333    3578999999999999999999999999999999643

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.94  E-value=1.1e-26  Score=240.08  Aligned_cols=145  Identities=31%  Similarity=0.592  Sum_probs=126.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++....  ...+.+||+.|+|||++.+..|+.++|||||||++|+|
T Consensus       122 LH~~~ivHrDlkp~NIll~~~g---~~kL~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  196 (318)
T 1fot_A          122 LHSKDIIYRDLKPENILLDKNG---HIKITDFGFAKYVPD--VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM  196 (318)
T ss_dssp             HHTTTEECCCCCGGGEEECTTS---CEEECCCSSCEECSS--CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHH
T ss_pred             HHHCCccccCCChheEEEcCCC---CEEEeecCcceecCC--ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHH
Confidence            3567999999999999998877   799999999987643  34567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHhhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQTVHA  155 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~~~~  155 (568)
                      ++|..||.+.+..+.+.++... ...+|    ..+++++.+||.+||..||.+||     +++++++||||..+.|....
T Consensus       197 l~g~~pf~~~~~~~~~~~i~~~-~~~~p----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~~~~~  271 (318)
T 1fot_A          197 LAGYTPFYDSNTMKTYEKILNA-ELRFP----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLL  271 (318)
T ss_dssp             HHSSCTTCCSSHHHHHHHHHHC-CCCCC----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHH
T ss_pred             HhCCCCCCCCCHHHHHHHHHhC-CCCCC----CCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCCHHHHH
Confidence            9999999999888888888765 34444    35789999999999999999999     99999999999988776443

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.94  E-value=9.2e-27  Score=251.90  Aligned_cols=148  Identities=28%  Similarity=0.526  Sum_probs=127.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.+...+.+||+|||+++...... .....+||+.|+|||++.+..|+.++||||+||++|+|
T Consensus       127 H~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel  206 (444)
T 3soa_A          127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYIL  206 (444)
T ss_dssp             HHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHH
Confidence            45699999999999999865444579999999998765433 34567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|.+||.+.+..+.+..+... ...++...+..+++.+.+||.+||..||.+|||+.|+++||||....
T Consensus       207 l~G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~~  275 (444)
T 3soa_A          207 LVGYPPFWDEDQHRLYQQIKAG-AYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRS  275 (444)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHT-CCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHHH
T ss_pred             HhCCCCCCCccHHHHHHHHHhC-CCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCccccCCc
Confidence            9999999999888888877654 45556556668899999999999999999999999999999997653

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.94  E-value=1.3e-26  Score=232.09  Aligned_cols=148  Identities=24%  Similarity=0.500  Sum_probs=128.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+||+++.++....+||+|||++.............||+.|+|||++.+..++.++||||+||++|+|+
T Consensus       122 H~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~  201 (284)
T 3kk8_A          122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILL  201 (284)
T ss_dssp             HHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHH
T ss_pred             HHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHH
Confidence            45699999999999999887755679999999998877666566678999999999999999999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +|..||.+.+.......+... ...++...+..+++.+.+|+.+||..||.+|||++|+++||||....
T Consensus       202 ~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (284)
T 3kk8_A          202 VGYPPFWDEDQHRLYAQIKAG-AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRE  269 (284)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHT-CCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCC
T ss_pred             HCCCCCCCCchhHHHHHHHhc-cccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCccccCCh
Confidence            999999998888777766554 44445545567889999999999999999999999999999997654

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.93  E-value=1e-26  Score=236.72  Aligned_cols=143  Identities=28%  Similarity=0.505  Sum_probs=122.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++...... .....+||+.|+|||++.+..|+.++||||+||++|+|
T Consensus       133 H~~~i~H~Dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  209 (297)
T 3fxz_A          133 HSNQVIHRDIKSDNILLGMDG---SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEM  209 (297)
T ss_dssp             HHTTEECCCCSGGGEEECTTC---CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHH
T ss_pred             HhCCceeCCCCHHHEEECCCC---CEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHH
Confidence            456999999999999999877   69999999998765433 34567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++|..||.+.+.......+.......+  ..+..+++.+.+|+.+||..||.+|||++|+++||||+..
T Consensus       210 l~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~  276 (297)
T 3fxz_A          210 IEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA  276 (297)
T ss_dssp             HHSSCTTTTSCHHHHHHHHHHHCSCCC--SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             HhCCCCCCCCCHHHHHHHHHhCCCCCC--CCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence            999999999888777766655443322  2235788999999999999999999999999999999754

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.93  E-value=2e-27  Score=250.51  Aligned_cols=146  Identities=27%  Similarity=0.470  Sum_probs=116.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC----------------------CCCCccccCCCcccChhhh
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP----------------------QDLADTLCGSPLYMAPEII   59 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~----------------------~~~~~t~~GT~~YmAPEvl   59 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.+..                      .......+||+.|+|||++
T Consensus       126 H~~~ivHrDlkp~NIll~~~~---~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  202 (388)
T 3oz6_A          126 HSGGLLHRDMKPSNILLNAEC---HVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEIL  202 (388)
T ss_dssp             HHTTEECCCCCGGGEEECTTC---CEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHH
T ss_pred             HhCCEEeCCCCHHHeEEcCCC---CEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHh
Confidence            556999999999999999877   699999999987532                      1123446899999999999


Q ss_pred             cc-CCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCC-----------------------------C
Q 008370           60 QN-HKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP-----------------------------P  109 (568)
Q Consensus        60 ~~-~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p-----------------------------~  109 (568)
                      .+ ..|+.++||||+||++|+|++|++||.+.+..+.+..+......+.+                             .
T Consensus       203 ~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (388)
T 3oz6_A          203 LGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKR  282 (388)
T ss_dssp             TTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CC
T ss_pred             cCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHH
Confidence            76 67899999999999999999999999999888877776532211100                             0


Q ss_pred             C-------------cccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370          110 G-------------AIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus       110 ~-------------~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      .             .....++++.+|+.+||..||.+|||++|+++||||..+.
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~~  336 (388)
T 3oz6_A          283 DIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFH  336 (388)
T ss_dssp             CCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTTC
T ss_pred             HhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHhc
Confidence            0             0115678999999999999999999999999999997654

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.93  E-value=6.1e-27  Score=249.90  Aligned_cols=146  Identities=27%  Similarity=0.581  Sum_probs=120.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceec-CCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l-~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..|||||||||+|||++.++   .+||+|||+++.. .......+.+||+.|+|||++.+..|+.++|||||||++|+|
T Consensus       170 H~~givHrDLKp~NILl~~~g---~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyel  246 (396)
T 4dc2_A          170 HERGIIYRDLKLDNVLLDSEG---HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM  246 (396)
T ss_dssp             HHTTCBCCCCCGGGEEECTTS---CEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HHCCEEeccCCHHHEEECCCC---CEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHH
Confidence            556999999999999999887   7999999999863 344456778999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCc---------HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH------HHHHhchh
Q 008370           81 VTGKPPFDGSN---------QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF------KEFFNHRF  145 (568)
Q Consensus        81 ltG~~PF~g~~---------~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa------eElL~Hpf  145 (568)
                      ++|+.||.+..         .......+.. ....+|.    .+++++.+||++||..||.+||++      +|+++|||
T Consensus       247 l~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~-~~~~~p~----~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpf  321 (396)
T 4dc2_A          247 MAGRSPFDIVGSSDNPDQNTEDYLFQVILE-KQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF  321 (396)
T ss_dssp             HHSSCSSTTTTC------CCHHHHHHHHHH-CCCCCCT----TSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTT
T ss_pred             HhCCCCCcccccccccchhhHHHHHHHHhc-cccCCCC----cCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCcc
Confidence            99999996431         2223444443 3444443    678999999999999999999984      89999999


Q ss_pred             HHHhHHhhhh
Q 008370          146 LGELRQTVHA  155 (568)
Q Consensus       146 f~~~~~~~~~  155 (568)
                      |..+.|....
T Consensus       322 f~~i~w~~l~  331 (396)
T 4dc2_A          322 FRNVDWDMME  331 (396)
T ss_dssp             TTTCCHHHHH
T ss_pred             ccCCCHHHHH
Confidence            9998876543

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=2.3e-27  Score=244.75  Aligned_cols=147  Identities=28%  Similarity=0.458  Sum_probs=126.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.+. .+.+||+|||+++...........+||+.|+|||++.+..++.++||||+||++|+|
T Consensus       118 lH~~givH~Dlkp~NIl~~~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  196 (321)
T 1tki_A          118 LHSHNIGHFDIRPENIIYQTRR-SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVL  196 (321)
T ss_dssp             HHHTTEECCCCCGGGEEESSSS-CCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHH
T ss_pred             HHHCCCCcCCCCHHHEEEccCC-CCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHH
Confidence            3557999999999999998732 237999999999987766555667899999999999988899999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++|..||.+.+..+.+..+... ...++...+..+++++.+|+.+||..||.+|||+.|+++||||...
T Consensus       197 l~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          197 LSGINPFLAETNQQIIENIMNA-EYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             HHSSCTTCCSSHHHHHHHHHHT-CCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             HhCCCCCcCCCHHHHHHHHHcC-CCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhccC
Confidence            9999999999888888877764 3444444455788999999999999999999999999999999754

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.93  E-value=1.6e-26  Score=247.45  Aligned_cols=149  Identities=32%  Similarity=0.513  Sum_probs=121.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccC-CCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++.  .+||+|||+++.+.........+||+.|+|||++.+. .|+.++|||||||++||
T Consensus       172 LH~~~ivHrDlkp~NILl~~~~~--~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~e  249 (420)
T 1j1b_A          172 IHSFGICHRDIKPQNLLLDPDTA--VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE  249 (420)
T ss_dssp             HHTTTEECSCCSGGGEEEETTTT--EEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             HHHCCccccCCChhhEEEeCCCC--eEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHH
Confidence            35679999999999999996542  6899999999987665555667899999999998764 78999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhcc----------------CCCCCCC--------cccccCHHHHHHHHHhhccCCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTST----------------ELRFPPG--------AIEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~----------------~~~~p~~--------~~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      |++|++||.+.+..+.+..++...                ...+|..        ....+++++.+||.+||..||.+||
T Consensus       250 ll~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~  329 (420)
T 1j1b_A          250 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL  329 (420)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCC
Confidence            999999999988777666655421                1111110        1124578999999999999999999


Q ss_pred             CHHHHHhchhHHHhHH
Q 008370          136 TFKEFFNHRFLGELRQ  151 (568)
Q Consensus       136 TaeElL~Hpff~~~~~  151 (568)
                      ++.|+++||||..+++
T Consensus       330 t~~e~l~hp~f~~~~~  345 (420)
T 1j1b_A          330 TPLEACAHSFFDELRD  345 (420)
T ss_dssp             CHHHHHTSGGGGGGGC
T ss_pred             CHHHHhCCHhhccccc
Confidence            9999999999977653

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.93  E-value=4.3e-27  Score=250.43  Aligned_cols=146  Identities=32%  Similarity=0.607  Sum_probs=113.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..|||||||||+|||++.++..+.+||+|||+++.........+.+||+.|+|||++.+..|+.++|||||||++|+|+
T Consensus       178 H~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  257 (400)
T 1nxk_A          178 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL  257 (400)
T ss_dssp             HHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHH
T ss_pred             HHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHH
Confidence            55699999999999999985434589999999999876555566789999999999999999999999999999999999


Q ss_pred             hCCCCCCCCcHHH----HHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           82 TGKPPFDGSNQLQ----LFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        82 tG~~PF~g~~~~~----~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      +|..||.+.+...    ....+.. ....++...+..+++++.+||.+||..||.+|||++++++||||..
T Consensus       258 ~g~~pf~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~  327 (400)
T 1nxk_A          258 CGYPPFYSNHGLAISPGMKTRIRM-GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ  327 (400)
T ss_dssp             HSSCSCCCCTTCSSCCSHHHHHHH-TCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHT
T ss_pred             hCCCCCCCCccccccHHHHHHHHc-CcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCccccC
Confidence            9999998754321    2333333 3445555555678999999999999999999999999999999964

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.93  E-value=1.4e-26  Score=241.65  Aligned_cols=147  Identities=32%  Similarity=0.555  Sum_probs=122.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC-CccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~-~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..+|+||||||+|||++.++....+||+|||+++....... ....+||+.|+|||++.+..|+.++||||+||++|+|
T Consensus       147 H~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  226 (351)
T 3c0i_A          147 HDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFIL  226 (351)
T ss_dssp             HHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHH
Confidence            556999999999999999876556799999999988765432 4567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|..||.+.. .+.+..+... ...+++..+..+++.+.+||.+||..||.+|||+.++++||||....
T Consensus       227 l~g~~pf~~~~-~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~  294 (351)
T 3c0i_A          227 LSGCLPFYGTK-ERLFEGIIKG-KYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERD  294 (351)
T ss_dssp             HHSSCSSCSSH-HHHHHHHHHT-CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHH
T ss_pred             HHCCCCCCCcH-HHHHHHHHcC-CCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCc
Confidence            99999998854 3455555543 33344334457789999999999999999999999999999998654

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.93  E-value=4.7e-27  Score=255.29  Aligned_cols=147  Identities=23%  Similarity=0.353  Sum_probs=114.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++...........+||+.|+|||++.+..|+.++||||+||++|+|
T Consensus       180 lH~~~iiHrDlkp~NIll~~~~---~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  256 (464)
T 3ttj_A          180 LHSAGIIHRDLKPSNIVVKSDC---TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM  256 (464)
T ss_dssp             HHHTTCCCCCCCGGGEEECTTS---CEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             HHHCCcccCCCChHhEEEeCCC---CEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHH
Confidence            3557999999999999999877   6999999999987666566678999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCC---------------------CCC-----ccc-----------ccCHHHHHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRF---------------------PPG-----AIE-----------ELHPDCVDLC  123 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~---------------------p~~-----~~~-----------~ls~~~~dLI  123 (568)
                      ++|++||.+.+..+.+..++.....+.                     ...     .+.           ..++++.+||
T Consensus       257 l~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl  336 (464)
T 3ttj_A          257 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL  336 (464)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHH
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHH
Confidence            999999999988877776654311110                     000     000           0146789999


Q ss_pred             HHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370          124 RCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus       124 ~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      .+||..||.+|||++|+++||||....
T Consensus       337 ~~mL~~dP~~R~ta~e~L~Hp~~~~~~  363 (464)
T 3ttj_A          337 SKMLVIDPAKRISVDDALQHPYINVWY  363 (464)
T ss_dssp             HHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             HHHcCCChhhCCCHHHHhcChhhhhcc
Confidence            999999999999999999999997653

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.93  E-value=1.3e-26  Score=244.57  Aligned_cols=149  Identities=25%  Similarity=0.474  Sum_probs=127.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..+|+||||||+|||+..+. ...+||+|||+++...........+||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       204 H~~~ivH~Dlkp~NIll~~~~-~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  282 (373)
T 2x4f_A          204 HQMYILHLDLKPENILCVNRD-AKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLL  282 (373)
T ss_dssp             HHTTEECCCCCGGGEEEEETT-TTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHH
T ss_pred             HHCCcccccCCHHHEEEecCC-CCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHH
Confidence            456999999999999996432 2379999999999887666666778999999999999889999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      +|..||.+.+..+.+..+... ...++...+..+++++.+||.+||..||.+|||++|+++||||......
T Consensus       283 tg~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~~~~  352 (373)
T 2x4f_A          283 SGLSPFLGDNDAETLNNILAC-RWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDHKLH  352 (373)
T ss_dssp             HSSCTTCCSSHHHHHHHHHHT-CCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCHHHH
T ss_pred             hCCCCCCCCCHHHHHHHHHhc-cCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCCchh
Confidence            999999999988888877764 3334444456789999999999999999999999999999999877543

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.93  E-value=5.7e-27  Score=245.23  Aligned_cols=145  Identities=27%  Similarity=0.550  Sum_probs=126.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.... .....+.+||+.|+|||++.+..|+.++||||+||++|+|
T Consensus       135 H~~~ivHrDlkp~NIll~~~g---~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  211 (345)
T 1xjd_A          135 HSKGIVYRDLKLDNILLDKDG---HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM  211 (345)
T ss_dssp             HHTTCBCCCCCGGGEEECTTS---CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HHCCeEeCCCChhhEEECCCC---CEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHH
Confidence            557999999999999999877   799999999986532 3345678999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHH-HHHhchhHHHhHHhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFK-EFFNHRFLGELRQTVH  154 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTae-ElL~Hpff~~~~~~~~  154 (568)
                      ++|..||.+.+..+.+..+... ...+|    ..+++++.+||.+||..||.+||++. ++++||||..+.|...
T Consensus       212 l~g~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~w~~l  281 (345)
T 1xjd_A          212 LIGQSPFHGQDEEELFHSIRMD-NPFYP----RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEEL  281 (345)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHC-CCCCC----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCHHHH
T ss_pred             hcCCCCCCCCCHHHHHHHHHhC-CCCCC----cccCHHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCCHHHH
Confidence            9999999999988888877654 33333    35789999999999999999999998 9999999998877644

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.93  E-value=1.2e-26  Score=250.59  Aligned_cols=149  Identities=21%  Similarity=0.488  Sum_probs=126.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhc-----cCCCCcccchhhHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVG   74 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~-----~~~ys~ksDIWSlG   74 (568)
                      |..+||||||||+|||++.++   .+||+|||+++.......  ....+||+.|+|||++.     ...|+.++||||||
T Consensus       192 H~~giiHrDLKp~NILl~~~g---~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlG  268 (437)
T 4aw2_A          192 HQLHYVHRDIKPDNILMDMNG---HIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLG  268 (437)
T ss_dssp             HHTTEECCCCSGGGEEECTTS---CEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHH
T ss_pred             HhCCeEecccCHHHeeEcCCC---CEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHH
Confidence            557999999999999999877   799999999987654432  34478999999999986     56789999999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCC--CCCHHHHHhchhHHHhHH
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVE--RITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~--RpTaeElL~Hpff~~~~~  151 (568)
                      |++|||++|++||.+.+..+.+.+++... ...+|. ....+++++++||++||..+|.+  |++++|+++||||..+.|
T Consensus       269 vil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~w  347 (437)
T 4aw2_A          269 VCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPT-QVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGIDW  347 (437)
T ss_dssp             HHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCS-SCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCCT
T ss_pred             HHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCc-ccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCCH
Confidence            99999999999999999988888887543 334443 23468999999999999988888  999999999999999887


Q ss_pred             hhh
Q 008370          152 TVH  154 (568)
Q Consensus       152 ~~~  154 (568)
                      ...
T Consensus       348 ~~l  350 (437)
T 4aw2_A          348 DNI  350 (437)
T ss_dssp             TTG
T ss_pred             HHH
Confidence            654

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.93  E-value=1.1e-26  Score=239.79  Aligned_cols=148  Identities=24%  Similarity=0.443  Sum_probs=126.0

Q ss_pred             CCCCeEecCCCCCCeEEecCC-CCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNE-VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~-~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..+|+||||||+|||++.++ ....+||+|||+++...........+||+.|+|||++.+..++.++|||||||++|+|
T Consensus       131 H~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l  210 (326)
T 2y0a_A          131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL  210 (326)
T ss_dssp             HHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             HHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHH
Confidence            557999999999999998765 2346999999999987655556677899999999999989999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|..||.+....+.+..+... ...++...+..+++.+.+||.+||..||.+|||++++++||||....
T Consensus       211 l~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~  279 (326)
T 2y0a_A          211 LSGASPFLGDTKQETLANVSAV-NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  279 (326)
T ss_dssp             HHSCCSSCCSSHHHHHHHHHHT-CCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCCS
T ss_pred             HHCcCCCCCCCHHHHHHHHHhc-CCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcCCCccCCc
Confidence            9999999998887777766543 33444444456789999999999999999999999999999997543

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.93  E-value=1.6e-26  Score=247.57  Aligned_cols=147  Identities=24%  Similarity=0.492  Sum_probs=125.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCC----CCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHK----YDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~----ys~ksDIWSlG   74 (568)
                      ||..|||||||||+|||++.++   .+||+|||+++......  ...+.+||+.|+|||++.+..    |+.++||||||
T Consensus       184 LH~~givHrDLKp~NILl~~~g---~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlG  260 (410)
T 3v8s_A          184 IHSMGFIHRDVKPDNMLLDKSG---HLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG  260 (410)
T ss_dssp             HHHTTEECCCCSGGGEEECTTS---CEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHH
T ss_pred             HHHCCeEeccCCHHHeeECCCC---CEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecch
Confidence            3567999999999999999877   79999999998876543  345789999999999997665    78899999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCC--CCCHHHHHhchhHHHhHH
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVE--RITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~--RpTaeElL~Hpff~~~~~  151 (568)
                      |++|+|++|+.||.+.+..+.+.+++... ...+|.  ...+++++++||.+||..+|.+  |++++|+++||||+.+.|
T Consensus       261 vilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~--~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~w  338 (410)
T 3v8s_A          261 VFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD--DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQW  338 (410)
T ss_dssp             HHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCT--TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSSC
T ss_pred             HHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCC--cccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCCH
Confidence            99999999999999999988888887643 334443  2367899999999999999988  999999999999998765


Q ss_pred             h
Q 008370          152 T  152 (568)
Q Consensus       152 ~  152 (568)
                      .
T Consensus       339 ~  339 (410)
T 3v8s_A          339 A  339 (410)
T ss_dssp             C
T ss_pred             H
Confidence            4

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.93  E-value=7.6e-27  Score=240.55  Aligned_cols=149  Identities=25%  Similarity=0.408  Sum_probs=121.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++.....+.+||+|||+++...........+||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       148 H~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll  227 (327)
T 3lm5_A          148 HQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLL  227 (327)
T ss_dssp             HHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             HHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHH
Confidence            45699999999999999874333479999999999876655556678999999999999999999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      +|+.||.+.+..+.+..+... ...++...+..+++.+.+||.+||..||.+|||++++++||||+...+
T Consensus       228 ~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~  296 (327)
T 3lm5_A          228 THTSPFVGEDNQETYLNISQV-NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF  296 (327)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHT-CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCT
T ss_pred             hCCCCCCCCCchHHHHHHHhc-ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCCHhhccccc
Confidence            999999998888777766544 344455555678999999999999999999999999999999976543

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.93  E-value=1.5e-26  Score=244.61  Aligned_cols=146  Identities=25%  Similarity=0.538  Sum_probs=126.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceec-CCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l-~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.. .......+.+||+.|+|||++.+..|+.++|||||||++||
T Consensus       155 LH~~givHrDlkp~NIll~~~g---~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  231 (373)
T 2r5t_A          155 LHSLNIVYRDLKPENILLDSQG---HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYE  231 (373)
T ss_dssp             HHHTTCCCCCCCGGGEEECTTS---CEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             HHHCCceecCCCHHHEEECCCC---CEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHH
Confidence            3557999999999999999877   7999999999864 33445667899999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH----HHHHhchhHHHhHHhhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF----KEFFNHRFLGELRQTVH  154 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa----eElL~Hpff~~~~~~~~  154 (568)
                      |++|..||.+.+..+.+.+++.. ...++    ..++..+.+||.+||..||.+||++    +++++||||..+.|...
T Consensus       232 ll~G~~Pf~~~~~~~~~~~i~~~-~~~~~----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w~~l  305 (373)
T 2r5t_A          232 MLYGLPPFYSRNTAEMYDNILNK-PLQLK----PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDL  305 (373)
T ss_dssp             HHHSSCTTCCSBHHHHHHHHHHS-CCCCC----SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCHHHH
T ss_pred             HHcCCCCCCCCCHHHHHHHHHhc-ccCCC----CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCHHHH
Confidence            99999999999988888888765 33333    3678999999999999999999986    69999999998877644

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.93  E-value=1.3e-26  Score=237.38  Aligned_cols=146  Identities=27%  Similarity=0.471  Sum_probs=115.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+|||++.++   .+||+|||+++..... ......+||+.|+|||++.+ ..++.++||||+||++|+
T Consensus       136 H~~~ivH~Dikp~NIl~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~  212 (311)
T 3niz_A          136 HQHRILHRDLKPQNLLINSDG---ALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAE  212 (311)
T ss_dssp             HHTTEECCCCCGGGEEECTTC---CEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHH
T ss_pred             HHCCcccCCCchHhEEECCCC---CEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHH
Confidence            456999999999999999877   6999999999876532 23445688999999999876 568999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCC-------------------------cccccCHHHHHHHHHhhccCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPG-------------------------AIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~-------------------------~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      |++|+.||.+....+.+..+........+..                         ....+++++.+||.+||..||.+|
T Consensus       213 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  292 (311)
T 3niz_A          213 MITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKR  292 (311)
T ss_dssp             HHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTS
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHC
Confidence            9999999998776666555543211111110                         112356789999999999999999


Q ss_pred             CCHHHHHhchhHHHhH
Q 008370          135 ITFKEFFNHRFLGELR  150 (568)
Q Consensus       135 pTaeElL~Hpff~~~~  150 (568)
                      ||++|+++||||+.+.
T Consensus       293 pt~~ell~hp~f~~~~  308 (311)
T 3niz_A          293 ISARDAMNHPYFKDLD  308 (311)
T ss_dssp             CCHHHHHTSGGGTTSC
T ss_pred             CCHHHHhcCcccccCC
Confidence            9999999999997654

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.93  E-value=7.3e-27  Score=247.84  Aligned_cols=147  Identities=32%  Similarity=0.494  Sum_probs=120.6

Q ss_pred             CCCCeEecCCCCCCeEEe-cCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccC-CCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVS-TNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~-~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+|||++ .++   .+||+|||+++...........+||+.|+|||++.+. .|+.++||||+||++|+
T Consensus       158 H~~~ivHrDlkp~Nill~~~~~---~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~e  234 (394)
T 4e7w_A          158 HSIGICHRDIKPQNLLLDPPSG---VLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAE  234 (394)
T ss_dssp             HHTTEECSCCSGGGEEEETTTT---EEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             HHCCccCCCCCHHHEEEcCCCC---cEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHH
Confidence            557999999999999998 454   7999999999987666666677899999999998764 58999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhcc----------------CCCCCC--------CcccccCHHHHHHHHHhhccCCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTST----------------ELRFPP--------GAIEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~----------------~~~~p~--------~~~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      |++|++||.+.+..+.+..+....                ...++.        .....+++++.+||.+||..||.+||
T Consensus       235 ll~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  314 (394)
T 4e7w_A          235 LMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARL  314 (394)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCC
Confidence            999999999988777766655421                011111        01124678999999999999999999


Q ss_pred             CHHHHHhchhHHHhHH
Q 008370          136 TFKEFFNHRFLGELRQ  151 (568)
Q Consensus       136 TaeElL~Hpff~~~~~  151 (568)
                      |+.|+++||||..+++
T Consensus       315 t~~e~l~hp~f~~~~~  330 (394)
T 4e7w_A          315 TAIEALCHPFFDELRT  330 (394)
T ss_dssp             CHHHHHTSGGGSTTTS
T ss_pred             CHHHHhcChhhhhhcc
Confidence            9999999999987754

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.93  E-value=2.2e-26  Score=240.98  Aligned_cols=144  Identities=28%  Similarity=0.604  Sum_probs=126.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.....  ..+.+||+.|+|||++.+..|+.++|||||||++|+|
T Consensus       157 LH~~~ivHrDlkp~NIll~~~g---~~kL~DFg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  231 (350)
T 1rdq_E          157 LHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKGR--TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM  231 (350)
T ss_dssp             HHHTTEECCCCSGGGEEECTTS---CEEECCCTTCEECSSC--BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HHHCCcccccCccceEEECCCC---CEEEcccccceeccCC--cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHH
Confidence            3557999999999999998877   7999999999876532  3467899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~~~  154 (568)
                      ++|..||.+.+..+.+.++... ...+|    ..+++.+.+||.+||..||.+||+     ++++++||||..+.|...
T Consensus       232 l~g~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w~~~  305 (350)
T 1rdq_E          232 AAGYPPFFADQPIQIYEKIVSG-KVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI  305 (350)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHC-CCCCC----TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHH
T ss_pred             hhCCCCCCCCCHHHHHHHHHcC-CCCCC----CCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCHHHH
Confidence            9999999999988888888765 34444    367899999999999999999998     999999999998877543

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.93  E-value=2.1e-26  Score=247.76  Aligned_cols=143  Identities=29%  Similarity=0.642  Sum_probs=122.7

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHh
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT   82 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELlt   82 (568)
                      .|||||||||+|||++.++   .+||+|||+++.... .......+||+.|+|||++.+..|+.++|||||||++|+|++
T Consensus       268 ~giiHrDlkp~NIll~~~~---~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  344 (446)
T 4ejn_A          268 KNVVYRDLKLENLMLDKDG---HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC  344 (446)
T ss_dssp             TCCCCCCCCGGGEEECSSS---CEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHH
T ss_pred             CCEEECCCCHHHEEECCCC---CEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhh
Confidence            6899999999999999877   799999999986432 334566899999999999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHhhh
Q 008370           83 GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        83 G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~~~  154 (568)
                      |+.||.+.+..+....+... ...+|    ..+++++.+||.+||..||.+||     +++|+++||||..+.+...
T Consensus       345 g~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~~~~  416 (446)
T 4ejn_A          345 GRLPFYNQDHEKLFELILME-EIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHV  416 (446)
T ss_dssp             SSCSSCCSSHHHHHHHHHHC-CCCCC----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHhC-CCCCC----ccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCHHHH
Confidence            99999999888887777654 33444    35789999999999999999999     9999999999998876543

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.93  E-value=2.4e-26  Score=260.85  Aligned_cols=146  Identities=26%  Similarity=0.600  Sum_probs=128.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..+||||||||+||||+.++   .+||+|||+++... ......+.+||+.|+|||++.+..|+.++|||||||++|||
T Consensus       459 H~~gIiHrDLKp~NILl~~~g---~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyel  535 (674)
T 3pfq_A          459 QSKGIIYRDLKLDNVMLDSEG---HIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM  535 (674)
T ss_dssp             HHTSEECCCCCSTTEEECSSS---CEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHH
T ss_pred             HhCCeEeccCChhhEEEcCCC---cEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHH
Confidence            557999999999999999877   79999999998643 33455678999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH-----HHHHhchhHHHhHHhhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF-----KEFFNHRFLGELRQTVHA  155 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa-----eElL~Hpff~~~~~~~~~  155 (568)
                      ++|++||.+.+..+++..|+.. ...+|    ..+++++.+||++||..||.+||++     +|+++||||..+.|....
T Consensus       536 ltG~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~l~  610 (674)
T 3pfq_A          536 LAGQAPFEGEDEDELFQSIMEH-NVAYP----KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLE  610 (674)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHSS-CCCCC----TTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHHHT
T ss_pred             HcCCCCCCCCCHHHHHHHHHhC-CCCCC----ccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHHHHH
Confidence            9999999999999998888764 34444    3688999999999999999999997     999999999998876543

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.93  E-value=2.2e-26  Score=240.37  Aligned_cols=145  Identities=28%  Similarity=0.586  Sum_probs=119.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecC-CCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~-~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++... ......+.+||+.|+|||++.+..|+.++||||+||++|+|
T Consensus       127 H~~~ivHrDlkp~NIll~~~g---~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  203 (345)
T 3a8x_A          127 HERGIIYRDLKLDNVLLDSEG---HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEM  203 (345)
T ss_dssp             HHTTCBCCCCCGGGEEECTTS---CEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HHCCceecCCCHHHEEECCCC---CEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHH
Confidence            557999999999999999877   79999999998643 33455678999999999999999999999999999999999


Q ss_pred             HhCCCCCCCC---------cHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCH------HHHHhchh
Q 008370           81 VTGKPPFDGS---------NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITF------KEFFNHRF  145 (568)
Q Consensus        81 ltG~~PF~g~---------~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTa------eElL~Hpf  145 (568)
                      ++|+.||...         ........+... ...+|    ..+++.+.+||.+||..||.+||++      +++++|||
T Consensus       204 l~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~  278 (345)
T 3a8x_A          204 MAGRSPFDIVGSSDNPDQNTEDYLFQVILEK-QIRIP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPF  278 (345)
T ss_dssp             HHSSCTTTTTTC-------CHHHHHHHHHHC-CCCCC----TTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGG
T ss_pred             HhCCCCcCCcccccccccccHHHHHHHHHcC-CCCCC----CCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCc
Confidence            9999999752         223344444433 44444    3678999999999999999999995      89999999


Q ss_pred             HHHhHHhhh
Q 008370          146 LGELRQTVH  154 (568)
Q Consensus       146 f~~~~~~~~  154 (568)
                      |..+.|...
T Consensus       279 f~~~~w~~~  287 (345)
T 3a8x_A          279 FRNVDWDMM  287 (345)
T ss_dssp             GTTCCHHHH
T ss_pred             cCCCCHHHH
Confidence            998877543

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.93  E-value=3.5e-26  Score=249.44  Aligned_cols=148  Identities=27%  Similarity=0.535  Sum_probs=128.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++..+....+||+|||+++...........+||+.|+|||++. ..|+.++||||+||++|+|+
T Consensus       153 H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll  231 (494)
T 3lij_A          153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILL  231 (494)
T ss_dssp             HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHH
T ss_pred             HHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHH
Confidence            55699999999999999876655679999999999877666666788999999999986 46899999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      +|.+||.+.+..+.+..+... ...++...+..+++.+.+||.+||..||.+|||+.++++||||.....
T Consensus       232 ~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~  300 (494)
T 3lij_A          232 AGYPPFGGQTDQEILRKVEKG-KYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCS  300 (494)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHT-CCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHH
T ss_pred             hCCCCCCCCCHHHHHHHHHhC-CCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCcc
Confidence            999999999988888777654 444555556678999999999999999999999999999999987644

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.93  E-value=8.5e-27  Score=239.93  Aligned_cols=138  Identities=17%  Similarity=0.184  Sum_probs=98.0

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhccC------CCCcccchh
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQNH------KYDAKADLW   71 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~~------~ys~ksDIW   71 (568)
                      .++||||||||+||||+.++   .+||+|||+|+......     .....+||+.|||||++.+.      .|+.++|||
T Consensus       126 ~~~IiHRDlKp~NILl~~~~---~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVw  202 (303)
T 3hmm_A          126 KPAIAHRDLKSKNILVKKNG---TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY  202 (303)
T ss_dssp             BCCEECSCCCGGGEEECTTS---CEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHH
T ss_pred             CCCEeeccCCcccEEECCCC---CEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhh
Confidence            45999999999999999887   79999999998764332     22346899999999999754      467889999


Q ss_pred             hHHHHHHHHHhCCCCCCCC---------------cHHHHHHHHHhcc-CCCCCCCc-ccccCHHHHHHHHHhhccCCCCC
Q 008370           72 SVGAILFQLVTGKPPFDGS---------------NQLQLFQNILTST-ELRFPPGA-IEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        72 SlGviL~ELltG~~PF~g~---------------~~~~~~~~Il~~~-~~~~p~~~-~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      ||||++|||++|.+||...               ...+....+.... .+.+|... .......+.+|+.+||..||.+|
T Consensus       203 S~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~R  282 (303)
T 3hmm_A          203 AMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR  282 (303)
T ss_dssp             HHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGS
T ss_pred             hHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHC
Confidence            9999999999997765321               1122222232221 12222211 11233568899999999999999


Q ss_pred             CCHHHHHhc
Q 008370          135 ITFKEFFNH  143 (568)
Q Consensus       135 pTaeElL~H  143 (568)
                      ||+.|+++.
T Consensus       283 Pt~~ei~~~  291 (303)
T 3hmm_A          283 LTALRIKKT  291 (303)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999764

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.93  E-value=3.7e-26  Score=228.26  Aligned_cols=148  Identities=26%  Similarity=0.501  Sum_probs=124.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||+..++....+||+|||+++............||+.|+|||++.+. ++.++||||+||++|+|+
T Consensus       123 H~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~  201 (277)
T 3f3z_A          123 HKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLL  201 (277)
T ss_dssp             HHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHH
T ss_pred             HHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHH
Confidence            4569999999999999954433447999999999987766666778899999999998765 899999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      +|+.||.+....+....+... ...++...+..+++.+.+|+.+||..||.+||++.++++||||+....
T Consensus       202 ~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~  270 (277)
T 3f3z_A          202 CGYPPFSAPTDSEVMLKIREG-TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLS  270 (277)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred             HCCCCCCCCCHHHHHHHHHhC-CCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence            999999998888777777654 334444334467899999999999999999999999999999977543

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.93  E-value=3.3e-26  Score=236.27  Aligned_cols=145  Identities=28%  Similarity=0.532  Sum_probs=120.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.... .......+||+.|+|||++.+..++.++|||||||++|+|
T Consensus       138 H~~~ivH~Dlkp~Nill~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  214 (327)
T 3a62_A          138 HQKGIIYRDLKPENIMLNHQG---HVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDM  214 (327)
T ss_dssp             HHTTCCCCCCCTTTEEECTTS---CEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHH
T ss_pred             HhCCEEcccCCHHHeEECCCC---cEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHH
Confidence            456999999999999999876   699999999986432 2344567899999999999998999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~~~  154 (568)
                      ++|+.||.+.+..+.+..+... ...+|    ..+++.+.+||.+||..||.+||     +++++++||||..+.+...
T Consensus       215 ~~g~~pf~~~~~~~~~~~i~~~-~~~~p----~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~~~~  288 (327)
T 3a62_A          215 LTGAPPFTGENRKKTIDKILKC-KLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEEL  288 (327)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHT-CCCCC----TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCHHHH
T ss_pred             HHCCCCCCCCCHHHHHHHHHhC-CCCCC----CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCHHHH
Confidence            9999999999888888777764 33333    36789999999999999999999     8999999999988766543

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.93  E-value=2.8e-26  Score=249.47  Aligned_cols=146  Identities=28%  Similarity=0.520  Sum_probs=123.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++..+....+||+|||+++...........+||+.|+|||++.+ .|+.++||||+||++|+|+
T Consensus       138 H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll  216 (486)
T 3mwu_A          138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILL  216 (486)
T ss_dssp             HHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHH
T ss_pred             HHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHH
Confidence            556999999999999997665555799999999987766655667789999999999876 5899999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +|.+||.+.+..+.+..+... ...++...+..+++++++||.+||..||.+|||+.++++||||...
T Consensus       217 ~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~  283 (486)
T 3mwu_A          217 SGTPPFYGKNEYDILKRVETG-KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (486)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHT-CCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred             hCCCCCCCCCHHHHHHHHHhC-CCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence            999999999988888877654 3344444556789999999999999999999999999999999765

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.93  E-value=5.9e-26  Score=243.42  Aligned_cols=148  Identities=22%  Similarity=0.387  Sum_probs=122.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhc-------cCCCCcccchhh
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQ-------NHKYDAKADLWS   72 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~-------~~~ys~ksDIWS   72 (568)
                      |..|||||||||+|||++.++   ++||+|||+++.......  ....+||+.|+|||++.       ...|+.++||||
T Consensus       179 H~~giiHrDLKp~NILld~~g---~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwS  255 (412)
T 2vd5_A          179 HRLGYVHRDIKPDNILLDRCG---HIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWA  255 (412)
T ss_dssp             HHTTEECCCCSGGGEEECTTS---CEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHH
T ss_pred             HHCCeeecccCHHHeeecCCC---CEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhH
Confidence            557999999999999999877   799999999988765432  34578999999999997       357899999999


Q ss_pred             HHHHHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCCC---CCHHHHHhchhHHH
Q 008370           73 VGAILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVER---ITFKEFFNHRFLGE  148 (568)
Q Consensus        73 lGviL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~R---pTaeElL~Hpff~~  148 (568)
                      |||++|||++|+.||.+.+..+.+.+++... ...+|. ....+++++++||++||. +|.+|   ++++|+++||||..
T Consensus       256 lGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~  333 (412)
T 2vd5_A          256 LGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPL-VDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFG  333 (412)
T ss_dssp             HHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC-----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTT
T ss_pred             HhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCc-cccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCC
Confidence            9999999999999999999888888887542 233332 234688999999999999 99998   59999999999998


Q ss_pred             hHHhhh
Q 008370          149 LRQTVH  154 (568)
Q Consensus       149 ~~~~~~  154 (568)
                      +.|...
T Consensus       334 i~w~~l  339 (412)
T 2vd5_A          334 LDWDGL  339 (412)
T ss_dssp             CCSTTS
T ss_pred             CCHHHH
Confidence            877643

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.93  E-value=4.7e-26  Score=233.64  Aligned_cols=146  Identities=29%  Similarity=0.479  Sum_probs=117.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+|||++.++   .+||+|||+++..... ......+||+.|+|||++.+ ..++.++|||||||++|+
T Consensus       125 H~~~ivH~Dlkp~NIl~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  201 (317)
T 2pmi_A          125 HENKILHRDLKPQNLLINKRG---QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAE  201 (317)
T ss_dssp             HHTTEECCCCCGGGEEECTTC---CEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred             HHCCeeeCCCChHHeEEcCCC---CEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHH
Confidence            456999999999999999877   6999999999876532 23445689999999999976 468999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCC-----------------CC------------CCcccccCHHHHHHHHHhhccC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELR-----------------FP------------PGAIEELHPDCVDLCRCLLRQN  130 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~-----------------~p------------~~~~~~ls~~~~dLI~~cL~~d  130 (568)
                      |++|+.||.+.+..+.+..+.......                 ++            +.....++.++.+||.+||..|
T Consensus       202 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d  281 (317)
T 2pmi_A          202 MITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLN  281 (317)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSS
T ss_pred             HHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCC
Confidence            999999999988877776665321100                 00            0011246789999999999999


Q ss_pred             CCCCCCHHHHHhchhHHHhH
Q 008370          131 PVERITFKEFFNHRFLGELR  150 (568)
Q Consensus       131 P~~RpTaeElL~Hpff~~~~  150 (568)
                      |.+|||++|+++||||....
T Consensus       282 P~~Rpt~~e~l~hp~f~~~~  301 (317)
T 2pmi_A          282 PDMRLSAKQALHHPWFAEYY  301 (317)
T ss_dssp             GGGSCCHHHHTTSGGGGGGC
T ss_pred             cccCCCHHHHhCChhhhccc
Confidence            99999999999999997654

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.93  E-value=1.8e-26  Score=240.81  Aligned_cols=147  Identities=32%  Similarity=0.498  Sum_probs=110.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++..+..+.+||+|||+++...........+||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       165 H~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  244 (349)
T 2w4o_A          165 HENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILL  244 (349)
T ss_dssp             HHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             HHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHH
Confidence            45699999999999999863334479999999998776555556778999999999999989999999999999999999


Q ss_pred             hCCCCCCCCcHHH-HHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           82 TGKPPFDGSNQLQ-LFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        82 tG~~PF~g~~~~~-~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +|..||.+....+ .+..+... ...++...+..++.++.+||.+||..||.+|||+.++++||||...
T Consensus       245 ~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  312 (349)
T 2w4o_A          245 CGFEPFYDERGDQFMFRRILNC-EYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGK  312 (349)
T ss_dssp             HSSCTTCCTTCHHHHHHHHHTT-CCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTST
T ss_pred             hCCCCCCCCcccHHHHHHHHhC-CCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence            9999998766544 44555443 3344444456788999999999999999999999999999999643

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.93  E-value=2.4e-26  Score=239.76  Aligned_cols=147  Identities=24%  Similarity=0.464  Sum_probs=121.9

Q ss_pred             CCCCeEecCCCCCCeEEecC-CCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTN-EVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~-~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+|||+... +....+||+|||+++..... ....+.+||+.|+|||++.+..|+.++|||||||++|+
T Consensus       133 H~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  212 (342)
T 2qr7_A          133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYT  212 (342)
T ss_dssp             HHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHH
Confidence            55699999999999998654 33346999999999876533 34556789999999999988889999999999999999


Q ss_pred             HHhCCCCCCC---CcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           80 LVTGKPPFDG---SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        80 LltG~~PF~g---~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++|..||.+   ....+.+..+... ...++...+..+++.+.+||.+||..||.+||++.++++||||...
T Consensus       213 ll~g~~Pf~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          213 MLTGYTPFANGPDDTPEEILARIGSG-KFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             HHHSSCSSCSSTTSCHHHHHHHHHHC-CCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred             HhcCCCCCCCCCcCCHHHHHHHHccC-CcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence            9999999986   3455566666543 4555555667889999999999999999999999999999999653

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.93  E-value=1.9e-26  Score=250.26  Aligned_cols=147  Identities=25%  Similarity=0.517  Sum_probs=126.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++.....+.+||+|||+++...........+||+.|+|||++.+ .|+.++||||+||++|+|+
T Consensus       143 H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll  221 (484)
T 3nyv_A          143 HKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILL  221 (484)
T ss_dssp             HHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHH
T ss_pred             HHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHH
Confidence            556999999999999996544445799999999988776665666789999999999876 6899999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +|.+||.+.+..+.+..+... ...++...+..+++.+++||.+||..||.+|||+.|+++||||....
T Consensus       222 ~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~  289 (484)
T 3nyv_A          222 SGCPPFNGANEYDILKKVEKG-KYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYT  289 (484)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHC-CCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHT
T ss_pred             HCCCCCCCCCHHHHHHHHHcC-CCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhChhhcccc
Confidence            999999999988888877665 34444445567899999999999999999999999999999997653

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.93  E-value=7.9e-26  Score=238.19  Aligned_cols=149  Identities=32%  Similarity=0.503  Sum_probs=122.7

Q ss_pred             CCCCCeEecCCCCCCeEEec-CCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccC-CCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVST-NEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~-~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~   78 (568)
                      ||..||+||||||+|||++. ++   .+||+|||+++.+.........+||+.|+|||++.+. .|+.++||||+||++|
T Consensus       157 LH~~gi~H~Dikp~Nil~~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~  233 (383)
T 3eb0_A          157 IHSLGICHRDIKPQNLLVNSKDN---TLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFG  233 (383)
T ss_dssp             HHTTTEECSCCCGGGEEEETTTT---EEEECCCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             HHHCcCccCccCHHHEEEcCCCC---cEEEEECCCCcccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHH
Confidence            35679999999999999984 44   7999999999987766666677899999999998765 4899999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccC----------------CCCCCC--------cccccCHHHHHHHHHhhccCCCCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTE----------------LRFPPG--------AIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~----------------~~~p~~--------~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      +|++|++||.+.+..+.+..++....                ..+|..        .+...++++.+||.+||..||.+|
T Consensus       234 ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  313 (383)
T 3eb0_A          234 ELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLR  313 (383)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGS
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhC
Confidence            99999999999888877766654211                111110        123467889999999999999999


Q ss_pred             CCHHHHHhchhHHHhHHh
Q 008370          135 ITFKEFFNHRFLGELRQT  152 (568)
Q Consensus       135 pTaeElL~Hpff~~~~~~  152 (568)
                      ||+.|+++||||..++..
T Consensus       314 ~t~~e~l~hp~f~~~~~~  331 (383)
T 3eb0_A          314 INPYEAMAHPFFDHLRNS  331 (383)
T ss_dssp             CCHHHHHTSGGGHHHHHC
T ss_pred             CCHHHHhcCHHHHHHHhh
Confidence            999999999999988754

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.93  E-value=1.1e-26  Score=243.60  Aligned_cols=148  Identities=12%  Similarity=0.111  Sum_probs=115.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc--CCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN--HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~--~~ys~ksDIWSlGviL~E   79 (568)
                      |..|||||||||+|||++.++   .+||+|||+++.....  .....||+.|+|||++.+  ..|+.++|||||||++|+
T Consensus       211 H~~~ivHrDikp~NIll~~~~---~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~e  285 (371)
T 3q60_A          211 QSKGLVHGHFTPDNLFIMPDG---RLMLGDVSALWKVGTR--GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYR  285 (371)
T ss_dssp             HHTTEEETTCSGGGEEECTTS---CEEECCGGGEEETTCE--EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHH
T ss_pred             HHCCCccCcCCHHHEEECCCC---CEEEEecceeeecCCC--ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHH
Confidence            557999999999999999877   6999999999876432  224566799999999987  689999999999999999


Q ss_pred             HHhCCCCCCCCcHHHH--HHHH--HhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHhhh
Q 008370           80 LVTGKPPFDGSNQLQL--FQNI--LTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        80 LltG~~PF~g~~~~~~--~~~I--l~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~~~  154 (568)
                      |++|+.||.+......  +..+  .......+.......+++.+.+||.+||..||.+|||+.++++||||..+.+...
T Consensus       286 lltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~~  364 (371)
T 3q60_A          286 VWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQNEIS  364 (371)
T ss_dssp             HHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHHHHHH
T ss_pred             HHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHHHHHh
Confidence            9999999987642210  0000  0000111112223477899999999999999999999999999999999887644

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.93  E-value=5.4e-26  Score=230.09  Aligned_cols=140  Identities=30%  Similarity=0.513  Sum_probs=116.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCC---CCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHK---YDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~---ys~ksDIWSlGviL   77 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++...... .....+||+.|+|||++.+..   ++.++|||||||++
T Consensus       154 H~~~ivH~Dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l  230 (298)
T 2zv2_A          154 HYQKIIHRDIKPSNLLVGEDG---HIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTL  230 (298)
T ss_dssp             HHTTEECCCCCGGGEEECTTS---CEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHH
T ss_pred             HHCCeeccCCCHHHEEECCCC---CEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHH
Confidence            456999999999999998877   69999999998765432 334568999999999997654   36789999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                      |+|++|+.||.+.........+... ...++.  ...+++.+.+||.+||..||.+||++.|+++||||.
T Consensus       231 ~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~  297 (298)
T 2zv2_A          231 YCFVFGQCPFMDERIMCLHSKIKSQ-ALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT  297 (298)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHC-CCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred             HHHHHCCCCCCCccHHHHHHHHhcc-cCCCCC--ccccCHHHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence            9999999999988877666666543 233332  246789999999999999999999999999999995

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.93  E-value=3.2e-26  Score=230.96  Aligned_cols=144  Identities=29%  Similarity=0.491  Sum_probs=112.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+|||++.++   .+||+|||+++..... ......+||+.|+|||++.+ ..++.++||||+||++|+
T Consensus       117 H~~~i~H~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~  193 (288)
T 1ob3_A          117 HDRRVLHRDLKPQNLLINREG---ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAE  193 (288)
T ss_dssp             HHTTCCCSCCCGGGEEECTTS---CEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHH
T ss_pred             HHCCeecCCCCHHHEEEcCCC---CEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHH
Confidence            456999999999999999877   6999999999876432 23345678999999999976 458999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCC----CC---------C-----------CcccccCHHHHHHHHHhhccCCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELR----FP---------P-----------GAIEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~----~p---------~-----------~~~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      |++|+.||.+.+..+.+..+.......    ++         +           .....+++.+.+||.+||..||.+||
T Consensus       194 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  273 (288)
T 1ob3_A          194 MVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI  273 (288)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSC
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCC
Confidence            999999999988777666654321100    00         0           11234688999999999999999999


Q ss_pred             CHHHHHhchhHHH
Q 008370          136 TFKEFFNHRFLGE  148 (568)
Q Consensus       136 TaeElL~Hpff~~  148 (568)
                      |++|+++||||+.
T Consensus       274 t~~e~l~hp~f~~  286 (288)
T 1ob3_A          274 TAKQALEHAYFKE  286 (288)
T ss_dssp             CHHHHHTSGGGGC
T ss_pred             CHHHHhcCcchhh
Confidence            9999999999964

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.93  E-value=3.3e-26  Score=243.19  Aligned_cols=145  Identities=25%  Similarity=0.517  Sum_probs=125.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++.++ .+.+||+|||+++...........+||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       166 H~~givHrDlkp~NIll~~~~-~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell  244 (387)
T 1kob_A          166 HEHSIVHLDIKPENIMCETKK-ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLL  244 (387)
T ss_dssp             HHTTEECCCCCGGGEEESSTT-CCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHH
T ss_pred             HhCCeeecccchHHeEEecCC-CCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHH
Confidence            456999999999999997543 2369999999999877665556678999999999999999999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      +|..||.+.+..+.+..+... ...++...+..+++++.+||.+||..||.+|||+.++++||||..
T Consensus       245 tg~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (387)
T 1kob_A          245 SGLSPFAGEDDLETLQNVKRC-DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG  310 (387)
T ss_dssp             HSCCSSCCSSHHHHHHHHHHC-CCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred             hCCCCCCCCCHHHHHHHHHhC-CCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCccccC
Confidence            999999999888887777654 344555555678999999999999999999999999999999964

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.93  E-value=7.1e-26  Score=234.71  Aligned_cols=146  Identities=29%  Similarity=0.431  Sum_probs=119.0

Q ss_pred             CCCeEecCCCCCCeEEec-CCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccC-CCCcccchhhHHHHHHHH
Q 008370            3 YVFMIVSANACQNLLVST-NEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQL   80 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~-~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~EL   80 (568)
                      ..||+||||||+|||++. ++   .+||+|||+++...........+||+.|+|||++.+. .++.++|||||||++|+|
T Consensus       149 ~~~ivH~Dlkp~NIll~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el  225 (360)
T 3e3p_A          149 SVNVCHRDIKPHNVLVNEADG---TLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEM  225 (360)
T ss_dssp             TTCCBCSCCCGGGEEEETTTT---EEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred             CCCeecCcCCHHHEEEeCCCC---cEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHH
Confidence            789999999999999986 44   7999999999987766656677899999999998654 489999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCC-------------------C--------CCcccccCHHHHHHHHHhhccCCCC
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRF-------------------P--------PGAIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~-------------------p--------~~~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      ++|+.||.+.+....+..+........                   .        +......++.+.+|+.+||+.||.+
T Consensus       226 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  305 (360)
T 3e3p_A          226 MLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEE  305 (360)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGG
T ss_pred             HhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccc
Confidence            999999999887777766654211000                   0        0011124678999999999999999


Q ss_pred             CCCHHHHHhchhHHHhHH
Q 008370          134 RITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       134 RpTaeElL~Hpff~~~~~  151 (568)
                      |||+.|+++||||.....
T Consensus       306 Rpt~~e~l~hp~f~~~~~  323 (360)
T 3e3p_A          306 RMKPYEALCHPYFDELHD  323 (360)
T ss_dssp             SCCHHHHTTSGGGGGGGC
T ss_pred             cCCHHHHhcCccccccCC
Confidence            999999999999987653

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.92  E-value=6.6e-26  Score=228.79  Aligned_cols=145  Identities=26%  Similarity=0.427  Sum_probs=114.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCC-CCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHK-YDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~-ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+|||++.++   .+||+|||+++..... ......+||+.|+|||++.+.. ++.++||||+||++|+
T Consensus       118 H~~~ivH~dikp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~  194 (292)
T 3o0g_A          118 HSRNVLHRDLKPQNLLINRNG---ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE  194 (292)
T ss_dssp             HHTTEECCCCSGGGEEECTTS---CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHH
T ss_pred             HhCCeecCCCCHHHEEEcCCC---CEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHH
Confidence            456999999999999999877   6999999999876533 3445568999999999997765 7999999999999999


Q ss_pred             HHhCCCC-CCCCcHHHHHHHHHhccCCCCC------------------------CCcccccCHHHHHHHHHhhccCCCCC
Q 008370           80 LVTGKPP-FDGSNQLQLFQNILTSTELRFP------------------------PGAIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        80 LltG~~P-F~g~~~~~~~~~Il~~~~~~~p------------------------~~~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      |++|..| |.+.+..+.+..+.........                        ......+++.+.+|+.+||+.||.+|
T Consensus       195 l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  274 (292)
T 3o0g_A          195 LANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQR  274 (292)
T ss_dssp             HTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGS
T ss_pred             HHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhC
Confidence            9987776 5666666666555432111000                        01123467899999999999999999


Q ss_pred             CCHHHHHhchhHHHh
Q 008370          135 ITFKEFFNHRFLGEL  149 (568)
Q Consensus       135 pTaeElL~Hpff~~~  149 (568)
                      ||++|+++||||+..
T Consensus       275 ~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          275 ISAEEALQHPYFSDF  289 (292)
T ss_dssp             CCHHHHHTSGGGTTC
T ss_pred             CCHHHHhcCcccccC
Confidence            999999999999754

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.92  E-value=1.5e-25  Score=238.24  Aligned_cols=145  Identities=23%  Similarity=0.444  Sum_probs=121.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc---CCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN---HKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~---~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.+.......+.+||+.|+|||++..   ..|+.++|||||||++|
T Consensus       132 H~~givHrDlkp~NIll~~~g---~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~  208 (384)
T 4fr4_A          132 QNQRIIHRDMKPDNILLDEHG---HVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAY  208 (384)
T ss_dssp             HHTTEECCCCSGGGEEECTTS---CEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHH
T ss_pred             HHCCceeccCcHHHeEECCCC---CEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHH
Confidence            556999999999999999877   799999999998876666778899999999999963   46899999999999999


Q ss_pred             HHHhCCCCCCCCc---HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-HHHHHhchhHHHhHHhhh
Q 008370           79 QLVTGKPPFDGSN---QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-FKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        79 ELltG~~PF~g~~---~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-aeElL~Hpff~~~~~~~~  154 (568)
                      +|++|+.||.+..   ..+....+.. ....+|    ..+++.+.+||.+||..||.+||+ ++++++||||..+.|...
T Consensus       209 elltG~~Pf~~~~~~~~~~~~~~~~~-~~~~~p----~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~~w~~~  283 (384)
T 4fr4_A          209 ELLRGRRPYHIRSSTSSKEIVHTFET-TVVTYP----SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDINWDAV  283 (384)
T ss_dssp             HHHHSSCSSCCCTTSCHHHHHHHHHH-CCCCCC----TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTCCHHHH
T ss_pred             HHHhCCCCCCCCCCccHHHHHHHHhh-cccCCC----CcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcCCHHHH
Confidence            9999999997543   3333433332 233333    367899999999999999999998 999999999999887644

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.92  E-value=1.1e-25  Score=231.62  Aligned_cols=143  Identities=26%  Similarity=0.521  Sum_probs=121.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++...... .....+||+.|+|||++.+..++.++|||||||++|+|
T Consensus       158 H~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el  234 (321)
T 2c30_A          158 HAQGVIHRDIKSDSILLTLDG---RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEM  234 (321)
T ss_dssp             HHTTEECCCCSGGGEEECTTC---CEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HHCCeecCCCCHHHEEECCCC---cEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHH
Confidence            456999999999999999876   69999999998765432 34567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++|+.||.+.+..+....+.......+.  ....+++.+.+|+.+||..||.+|||++++++||||...
T Consensus       235 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          235 VDGEPPYFSDSPVQAMKRLRDSPPPKLK--NSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT  301 (321)
T ss_dssp             HHSSCTTTTSCHHHHHHHHHHSSCCCCT--TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred             HhCCCCCCCCCHHHHHHHHhcCCCCCcC--ccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence            9999999998887777766654332222  234678899999999999999999999999999999643

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.92  E-value=5e-26  Score=234.11  Aligned_cols=147  Identities=27%  Similarity=0.409  Sum_probs=113.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+|||++.++   .+||+|||+++..... ......+||+.|+|||++.+ ..++.++||||+||++|+
T Consensus       117 H~~~ivH~Dikp~NIl~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~  193 (324)
T 3mtl_A          117 HRQKVLHRDLKPQNLLINERG---ELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYE  193 (324)
T ss_dssp             HHTTEEESSCCGGGEEECTTC---CEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred             HHCCccCCCcCHHHEEECCCC---CEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHH
Confidence            456999999999999999877   6999999999865432 23445678999999999876 568999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCC-------------------------cccccCHHHHHHHHHhhccCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPG-------------------------AIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~-------------------------~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      |++|+.||.+.+..+....+......+.+..                         ....+++++.+|+.+||..||.+|
T Consensus       194 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  273 (324)
T 3mtl_A          194 MATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNR  273 (324)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGS
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccC
Confidence            9999999999888777766654321111100                         012457889999999999999999


Q ss_pred             CCHHHHHhchhHHHhHH
Q 008370          135 ITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       135 pTaeElL~Hpff~~~~~  151 (568)
                      ||++|+++||||..+..
T Consensus       274 ~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          274 ISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             CCHHHHTTSGGGGGGCS
T ss_pred             CCHHHHhcChhhhhccc
Confidence            99999999999987654

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.92  E-value=6.7e-26  Score=238.66  Aligned_cols=145  Identities=26%  Similarity=0.420  Sum_probs=114.0

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHh
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVT   82 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELlt   82 (568)
                      ..|||||||||+|||++.+. ...+||+|||+++....  .....+||+.|+|||++.+..|+.++|||||||++|+|++
T Consensus       177 ~~~ivHrDlkp~NIll~~~~-~~~~kL~DFG~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt  253 (382)
T 2vx3_A          177 ELSIIHCDLKPENILLCNPK-RSAIKIVDFGSSCQLGQ--RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHT  253 (382)
T ss_dssp             TTCEECCCCSGGGEEESSTT-SCCEEECCCTTCEETTC--CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             CCCEEcCCCCcccEEEecCC-CCcEEEEeccCceeccc--ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHh
Confidence            46899999999999996532 23799999999987643  2346789999999999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHhccCCC-----------------CCCCcc-----------------c---------------
Q 008370           83 GKPPFDGSNQLQLFQNILTSTELR-----------------FPPGAI-----------------E---------------  113 (568)
Q Consensus        83 G~~PF~g~~~~~~~~~Il~~~~~~-----------------~p~~~~-----------------~---------------  113 (568)
                      |++||.+.+..+.+..+.......                 ++...+                 .               
T Consensus       254 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  333 (382)
T 2vx3_A          254 GEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGG  333 (382)
T ss_dssp             SSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGG
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCc
Confidence            999999988887777665421110                 000000                 0               


Q ss_pred             ----------ccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370          114 ----------ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus       114 ----------~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                                ...+.+.+||.+||..||.+|||++|+++||||....
T Consensus       334 ~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~  380 (382)
T 2vx3_A          334 RRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA  380 (382)
T ss_dssp             TTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred             cccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence                      0013789999999999999999999999999996543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.92  E-value=8.5e-26  Score=232.74  Aligned_cols=148  Identities=28%  Similarity=0.455  Sum_probs=120.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhcc--CCCCcccchhhHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQN--HKYDAKADLWSVG   74 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~--~~ys~ksDIWSlG   74 (568)
                      |..+|+||||||+|||++.++ ...+||+|||+++.+....     ......||+.|+|||++.+  ..++.++||||||
T Consensus       185 H~~~ivH~Dlkp~NIll~~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG  263 (345)
T 3hko_A          185 HNQGICHRDIKPENFLFSTNK-SFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAG  263 (345)
T ss_dssp             HHTTEECCCCCGGGEEESCSS-SCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHHHH
T ss_pred             HHCCccccCCChhhEEEecCC-CceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHHHH
Confidence            456999999999999998654 2369999999998653211     2345679999999999965  6788999999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      |++|+|++|+.||.+.+..+....+.... ..++......+++.+.+||.+||..||.+||++.++++||||....+
T Consensus       264 ~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          264 VLLHLLLMGAVPFPGVNDADTISQVLNKK-LCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHHCC-CCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred             HHHHHHHHCCCCCCCCChHHHHHHHHhcc-cccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence            99999999999999998888877776653 33343344567899999999999999999999999999999987643

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.92  E-value=1.4e-26  Score=247.83  Aligned_cols=150  Identities=32%  Similarity=0.542  Sum_probs=113.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc---CCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN---HKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~---~~ys~ksDIWSlGviL~   78 (568)
                      |..+|+||||||+|||++.++....+||+|||+++.........+.+||+.|+|||++.+   ..|+.++|||||||++|
T Consensus       256 H~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~  335 (419)
T 3i6u_A          256 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF  335 (419)
T ss_dssp             HHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHH
T ss_pred             HHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHH
Confidence            456999999999999998766555799999999998776666677899999999999853   56788999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      +|++|..||.+......+...+......+++..+..+++.+.+|+.+||..||.+||+++|+++||||+....
T Consensus       336 ~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~  408 (419)
T 3i6u_A          336 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDM  408 (419)
T ss_dssp             HHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCHHH
T ss_pred             HHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCChhH
Confidence            9999999998754433333333334444444455678899999999999999999999999999999976543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.92  E-value=9e-26  Score=246.77  Aligned_cols=147  Identities=24%  Similarity=0.458  Sum_probs=127.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++.++....+||+|||+++...........+||+.|+|||++.+ .|+.++||||+||++|+|+
T Consensus       163 H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll  241 (504)
T 3q5i_A          163 HKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILL  241 (504)
T ss_dssp             HHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHH
T ss_pred             HHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHH
Confidence            456999999999999999876555799999999998876666677889999999999874 6899999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +|.+||.+.+..+.+..+... ...++...+..+++.+++||.+||..||.+|||++|+++||||....
T Consensus       242 ~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  309 (504)
T 3q5i_A          242 CGYPPFGGQNDQDIIKKVEKG-KYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA  309 (504)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred             hCCCCCCCCCHHHHHHHHHcC-CCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence            999999999988888877664 34444444567899999999999999999999999999999997653

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.92  E-value=3.5e-26  Score=240.16  Aligned_cols=146  Identities=23%  Similarity=0.357  Sum_probs=107.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++.++   .+||+|||+++...........+||+.|+|||++.+..|+.++||||+||++|+|+
T Consensus       144 H~~~ivH~Dlkp~NIl~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~  220 (371)
T 2xrw_A          144 HSAGIIHRDLKPSNIVVKSDC---TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMI  220 (371)
T ss_dssp             HHTTCCCSCCCGGGEEECTTS---CEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHH
T ss_pred             HHCCeecccCCHHHEEEcCCC---CEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHH
Confidence            456999999999999999876   69999999998766554555678999999999999999999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCC---------------------CCCc----------------ccccCHHHHHHHH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRF---------------------PPGA----------------IEELHPDCVDLCR  124 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~---------------------p~~~----------------~~~ls~~~~dLI~  124 (568)
                      +|+.||.+.+..+.+..+......+.                     ....                ....++.+.+||.
T Consensus       221 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  300 (371)
T 2xrw_A          221 KGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLS  300 (371)
T ss_dssp             HSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHH
Confidence            99999999988777776654321110                     0000                0012467899999


Q ss_pred             HhhccCCCCCCCHHHHHhchhHHHhH
Q 008370          125 CLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus       125 ~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +||..||.+|||++|+++||||....
T Consensus       301 ~mL~~dP~~R~t~~e~l~hp~~~~~~  326 (371)
T 2xrw_A          301 KMLVIDASKRISVDEALQHPYINVWY  326 (371)
T ss_dssp             HHSCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             HHCcCChhhCCCHHHHhCCcchhhhc
Confidence            99999999999999999999997543

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.92  E-value=7.1e-26  Score=237.69  Aligned_cols=142  Identities=30%  Similarity=0.595  Sum_probs=121.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc------CCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN------HKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~------~~ys~ksDIWSlGv   75 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.+.........+||+.|+|||++.+      ..++.++|||||||
T Consensus       217 H~~gi~H~Dlkp~NIl~~~~~---~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~  293 (365)
T 2y7j_A          217 HANNIVHRDLKPENILLDDNM---QIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGV  293 (365)
T ss_dssp             HHTTEECSCCSGGGEEECTTC---CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHH
T ss_pred             HhCCeecCCCCHHHEEECCCC---CEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHH
Confidence            456999999999999999876   699999999998876666667899999999999863      35888999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                      ++|+|++|..||.+.+....+..+... ...++...+..++..+.+||.+||..||.+||+++++++||||+
T Consensus       294 il~ell~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~  364 (365)
T 2y7j_A          294 ILFTLLAGSPPFWHRRQILMLRMIMEG-QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFE  364 (365)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHT-CCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGC
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhC-CCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccC
Confidence            999999999999988877777766554 33333333456788999999999999999999999999999995

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.92  E-value=6.1e-26  Score=232.70  Aligned_cols=149  Identities=23%  Similarity=0.425  Sum_probs=126.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCC-CCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEV-TPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~-~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++. ...+||+|||+++...........+||+.|+|||++.+..++.++|||||||++|+|
T Consensus       132 H~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l  211 (321)
T 2a2a_A          132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL  211 (321)
T ss_dssp             HHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             HhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHH
Confidence            4569999999999999987652 226999999999987765555667899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      ++|..||.+....+.+..+... ...+++..+..+++.+.+||.+||..||.+|||++|+++||||.....
T Consensus       212 ~~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~~  281 (321)
T 2a2a_A          212 LSGASPFLGDTKQETLANITSV-SYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDN  281 (321)
T ss_dssp             HHSCCSSCCSSHHHHHHHHHTT-CCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSSH
T ss_pred             HHCCCCCCCCCHHHHHHHHHhc-ccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCCc
Confidence            9999999998888877776643 334444344567889999999999999999999999999999976543

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.92  E-value=1.2e-25  Score=233.17  Aligned_cols=143  Identities=24%  Similarity=0.417  Sum_probs=114.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-----CCCccccCCCcccChhhhcc-CCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-----DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-----~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGv   75 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.+...     ......+||+.|+|||++.+ ..++.++|||||||
T Consensus       141 H~~~ivH~Dlkp~NIl~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~  217 (351)
T 3mi9_A          141 HRNKILHRDMKAANVLITRDG---VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGC  217 (351)
T ss_dssp             HHTTEECCCCSGGGEEECTTS---CEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHH
T ss_pred             HHCCeeCCCCCHHHEEEcCCC---CEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHH
Confidence            456999999999999999877   6999999999876422     23345678999999999876 46899999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccc----------------------------cCHHHHHHHHHhh
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEE----------------------------LHPDCVDLCRCLL  127 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~----------------------------ls~~~~dLI~~cL  127 (568)
                      ++|+|++|.+||.+.........+..... ..++..+..                            .++.+.+||.+||
T Consensus       218 il~ell~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  296 (351)
T 3mi9_A          218 IMAEMWTRSPIMQGNTEQHQLALISQLCG-SITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLL  296 (351)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHC-CCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHS
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHHHhC-CCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHh
Confidence            99999999999999887777666554221 111111111                            2577999999999


Q ss_pred             ccCCCCCCCHHHHHhchhHHH
Q 008370          128 RQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus       128 ~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ..||.+|||++|+++||||..
T Consensus       297 ~~dP~~R~t~~e~l~hp~f~~  317 (351)
T 3mi9_A          297 VLDPAQRIDSDDALNHDFFWS  317 (351)
T ss_dssp             CSSGGGSCCHHHHHTSGGGGS
T ss_pred             cCChhhCCCHHHHhCCCCcCC
Confidence            999999999999999999954

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.92  E-value=5.5e-26  Score=232.00  Aligned_cols=146  Identities=28%  Similarity=0.443  Sum_probs=121.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++.++   .+||+|||+++............||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       137 H~~gi~H~dlkp~Nili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  213 (326)
T 1blx_A          137 HSHRVVHRDLKPQNILVTSSG---QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF  213 (326)
T ss_dssp             HHTTCCCCCCCGGGEEECTTC---CEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             HHCCceeccCCHHHeEEcCCC---CEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHH
Confidence            456999999999999998877   69999999998766544455678999999999999889999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCC----CC------------------CCcccccCHHHHHHHHHhhccCCCCCCCHHH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELR----FP------------------PGAIEELHPDCVDLCRCLLRQNPVERITFKE  139 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~----~p------------------~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeE  139 (568)
                      +|+.||.+....+.+..+.......    ++                  ......++..+.+|+.+||..||.+||++.+
T Consensus       214 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  293 (326)
T 1blx_A          214 RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS  293 (326)
T ss_dssp             HSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             cCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHH
Confidence            9999999988877777665421110    00                  0112456789999999999999999999999


Q ss_pred             HHhchhHHHhH
Q 008370          140 FFNHRFLGELR  150 (568)
Q Consensus       140 lL~Hpff~~~~  150 (568)
                      +++||||..+.
T Consensus       294 ~l~hp~~~~~~  304 (326)
T 1blx_A          294 ALSHPYFQDLE  304 (326)
T ss_dssp             HHTSGGGTTCC
T ss_pred             HhcCccccccc
Confidence            99999997654

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.92  E-value=1.3e-26  Score=241.76  Aligned_cols=139  Identities=29%  Similarity=0.536  Sum_probs=115.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCC-CcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKY-DAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~y-s~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.........+.+||+.|+|||++.+..+ +.++||||+||++|+|
T Consensus       125 H~~givH~Dlkp~NIll~~~~---~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~l  201 (336)
T 3h4j_B          125 HRHKIVHRDLKPENLLLDDNL---NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVM  201 (336)
T ss_dssp             HHHTCCCCCCSTTTEEECTTC---CEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHH
T ss_pred             HHCCeEecCCchhhEEEcCCC---CEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHH
Confidence            345899999999999999876   699999999988777666778899999999999988776 6889999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ++|+.||.+.........+.. ....    .+..+++.+.+||.+||..||.+|||++|+++||||..
T Consensus       202 l~g~~Pf~~~~~~~~~~~i~~-~~~~----~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~  264 (336)
T 3h4j_B          202 LVGRLPFDDEFIPNLFKKVNS-CVYV----MPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV  264 (336)
T ss_dssp             HHSSCSSBCSSSTTCBCCCCS-SCCC----CCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHT
T ss_pred             HhCCCCCCCccHHHHHHHHHc-CCCC----CcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhcc
Confidence            999999987654333222211 1122    23467899999999999999999999999999999964

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=1.5e-25  Score=235.59  Aligned_cols=146  Identities=29%  Similarity=0.453  Sum_probs=118.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++....  .....+||+.|+|||++.+ ..|+.++||||+||++|+
T Consensus       144 LH~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  218 (367)
T 1cm8_A          144 IHAAGIIHRDLKPGNLAVNEDC---ELKILDFGLARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE  218 (367)
T ss_dssp             HHHTTEECCCCCGGGEEECTTC---CEEECCCTTCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHH
T ss_pred             HHHCCccccCcCHHHEEEcCCC---CEEEEeeeccccccc--ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHH
Confidence            3557999999999999999877   699999999987643  2345689999999999877 679999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCC----------------------CCCC----CcccccCHHHHHHHHHhhccCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTEL----------------------RFPP----GAIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~----------------------~~p~----~~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      |++|++||.+.+..+.+..+......                      ..+.    ......++.+.+|+.+||..||.+
T Consensus       219 ll~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~  298 (367)
T 1cm8_A          219 MITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQ  298 (367)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTT
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhH
Confidence            99999999998887776666532110                      0010    112356889999999999999999


Q ss_pred             CCCHHHHHhchhHHHhHH
Q 008370          134 RITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       134 RpTaeElL~Hpff~~~~~  151 (568)
                      |||++++++||||..+..
T Consensus       299 R~t~~e~l~hp~f~~~~~  316 (367)
T 1cm8_A          299 RVTAGEALAHPYFESLHD  316 (367)
T ss_dssp             SCCHHHHHHSGGGTTTC-
T ss_pred             CCCHHHHhcChHHHhhcC
Confidence            999999999999976543

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.92  E-value=1.3e-25  Score=226.53  Aligned_cols=144  Identities=25%  Similarity=0.476  Sum_probs=111.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++.+...+.+||+|||+++...........+||+.|+|||++. ..++.++|||||||++|+|+
T Consensus       141 H~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll  219 (285)
T 3is5_A          141 HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLL  219 (285)
T ss_dssp             HHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHH
T ss_pred             HhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHH
Confidence            45699999999999999765444579999999998766555556678999999999986 46889999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      +|+.||.+....+....+.... ..++. ....+++.+.+|+.+||..||.+|||+.|+++||||++
T Consensus       220 ~g~~pf~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          220 TGCLPFTGTSLEEVQQKATYKE-PNYAV-ECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHCC-CCCCC---CCCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             hCCCCCCCCCHHHHHhhhccCC-ccccc-ccCcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            9999999988777666554432 22221 12346889999999999999999999999999999964

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.92  E-value=6.4e-26  Score=235.63  Aligned_cols=143  Identities=24%  Similarity=0.354  Sum_probs=113.0

Q ss_pred             CCCCeEecCCCCCCeEEecCC----------------------CCCcEEEeecccceecCCCCCCccccCCCcccChhhh
Q 008370            2 CYVFMIVSANACQNLLVSTNE----------------------VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII   59 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~----------------------~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl   59 (568)
                      |..||+||||||+|||++.+.                      ....+||+|||+++....  .....+||+.|+|||++
T Consensus       154 H~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~--~~~~~~gt~~y~aPE~~  231 (360)
T 3llt_A          154 RKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD--YHGSIINTRQYRAPEVI  231 (360)
T ss_dssp             HHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS--CCCSCCSCGGGCCHHHH
T ss_pred             HHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCC--CCcCccCcccccCcHHH
Confidence            557999999999999997521                      123799999999987543  33467899999999999


Q ss_pred             ccCCCCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCC--------------------------Cc--
Q 008370           60 QNHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPP--------------------------GA--  111 (568)
Q Consensus        60 ~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~--------------------------~~--  111 (568)
                      .+..|+.++|||||||++|+|++|+.||.+.+..+.+..+.... ..+|.                          ..  
T Consensus       232 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  310 (360)
T 3llt_A          232 LNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESII-QPIPKNMLYEATKTNGSKYVNKDELKLAWPENASS  310 (360)
T ss_dssp             TTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHT-CCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSC
T ss_pred             cCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhc-CCCCHHHHhhhhhccCccccCcccceecCcccccc
Confidence            99999999999999999999999999999888776665554321 11110                          00  


Q ss_pred             --------------ccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370          112 --------------IEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus       112 --------------~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                                    ....++.+.+||.+||+.||.+|||++|+++||||+
T Consensus       311 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          311 INSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             hhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence                          001136778999999999999999999999999984

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.92  E-value=2.8e-26  Score=236.79  Aligned_cols=146  Identities=28%  Similarity=0.521  Sum_probs=99.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++....+||+|||+++..... ......+||+.|+|||++.+..|+.++||||+||++|+|
T Consensus       123 H~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~l  202 (325)
T 3kn6_A          123 HDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTM  202 (325)
T ss_dssp             HHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHH
T ss_pred             HHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHH
Confidence            4569999999999999987765557999999999876543 334567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcH-------HHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           81 VTGKPPFDGSNQ-------LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        81 ltG~~PF~g~~~-------~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ++|..||.+.+.       .+.+..+.. ....++...+..+++++.+||.+||..||.+|||++++++||||..
T Consensus       203 l~g~~pf~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~  276 (325)
T 3kn6_A          203 LSGQVPFQSHDRSLTCTSAVEIMKKIKK-GDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQD  276 (325)
T ss_dssp             HHSSCTTC-------CCCHHHHHHHHTT-TCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCT
T ss_pred             HhCCCCCCCCccccccccHHHHHHHHHc-CCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhcc
Confidence            999999986442       344444443 3444554455678999999999999999999999999999999964

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.92  E-value=4.6e-26  Score=233.11  Aligned_cols=136  Identities=22%  Similarity=0.355  Sum_probs=108.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++...........+||+.|+|||++.+ .++.++|||||||++|+|+
T Consensus       174 H~~~ivH~Dikp~NIll~~~~---~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~  249 (311)
T 3p1a_A          174 HSQGLVHLDVKPANIFLGPRG---RCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVA  249 (311)
T ss_dssp             HHTTEECCCCSGGGEEECGGG---CEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHH
T ss_pred             HHCCEecCCCCHHHEEECCCC---CEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHH
Confidence            456899999999999998877   699999999988766555666789999999999876 6899999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                      +|..||.+....   ..+...   ..++.....+++.+.+|+.+||..||.+|||++|+++||||+
T Consensus       250 ~g~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~~~  309 (311)
T 3p1a_A          250 CNMELPHGGEGW---QQLRQG---YLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLR  309 (311)
T ss_dssp             HTCCCCSSHHHH---HHHTTT---CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGS
T ss_pred             hCCCCCCCccHH---HHHhcc---CCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCcccc
Confidence            998777654332   223222   223334456789999999999999999999999999999995

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.92  E-value=8e-26  Score=226.71  Aligned_cols=140  Identities=26%  Similarity=0.474  Sum_probs=104.2

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhh----ccCCCCcccchhhHHHHHHHH
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII----QNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl----~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||+||||||+|||++.++   .+||+|||+++............||+.|+|||++    ....++.++||||+||++|+|
T Consensus       130 ~i~H~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l  206 (290)
T 3fme_A          130 SVIHRDVKPSNVLINALG---QVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL  206 (290)
T ss_dssp             CCCCCCCSGGGCEECTTC---CEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHH
T ss_pred             CeecCCCCHHHEEECCCC---CEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHH
Confidence            999999999999998876   6999999999877655555566899999999996    456788999999999999999


Q ss_pred             HhCCCCCCC-CcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           81 VTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        81 ltG~~PF~g-~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|+.||.. ......+...........+   ...+++.+.+|+.+||..||.+|||+.|+++||||....
T Consensus       207 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~  274 (290)
T 3fme_A          207 AILRFPYDSWGTPFQQLKQVVEEPSPQLP---ADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHE  274 (290)
T ss_dssp             HHTSCSSCCCSCHHHHHHHHHHSCCCCCC---TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             HHCCCCccccCchHHHHHHHhccCCCCcc---cccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccCc
Confidence            999999986 3444445455444333333   246789999999999999999999999999999997654

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.92  E-value=1.1e-25  Score=225.29  Aligned_cols=150  Identities=24%  Similarity=0.452  Sum_probs=121.5

Q ss_pred             CCCCeEecCCCCCCeEEecCC-CCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNE-VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~-~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+||+++.++ ....+||+|||+++............|++.|+|||++.+..++.++||||||+++|+|
T Consensus       125 H~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  204 (283)
T 3bhy_A          125 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL  204 (283)
T ss_dssp             HHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHH
T ss_pred             HhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHH
Confidence            456999999999999998765 2346999999999887655555567899999999999988999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      ++|..||.+....+.+..+... ...++...+..+++.+.+|+.+||..||.+||++.++++||||..+++.
T Consensus       205 ~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~  275 (283)
T 3bhy_A          205 LSGASPFLGETKQETLTNISAV-NYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR  275 (283)
T ss_dssp             HHSSCTTCCSSHHHHHHHHHTT-CCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred             HHCCCCCCCcchHHHHHHhHhc-ccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence            9999999998887777666543 3333333345678899999999999999999999999999999987654

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.92  E-value=6.8e-26  Score=244.23  Aligned_cols=149  Identities=28%  Similarity=0.429  Sum_probs=107.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----------------------------CCccccCCCc
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----------------------------LADTLCGSPL   52 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----------------------------~~~t~~GT~~   52 (568)
                      ||..|||||||||+||||+.++   .+||+|||+++......                            .....+||+.
T Consensus       172 LH~~~iiHrDlKp~NILl~~~~---~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  248 (458)
T 3rp9_A          172 VHSAGILHRDLKPANCLVNQDC---SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRW  248 (458)
T ss_dssp             HHHTTCBCCCCCGGGEEECTTC---CEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCT
T ss_pred             HHhCCcCCCCCChhhEEECCCC---CEeecccccchhccCccccccccccCccccccccccccccccccccccCCccccc
Confidence            3557999999999999999887   69999999998764221                            2345688999


Q ss_pred             ccChhhh-ccCCCCcccchhhHHHHHHHHHh-----------CCCCCCCCcH--------------------HHHHHHHH
Q 008370           53 YMAPEII-QNHKYDAKADLWSVGAILFQLVT-----------GKPPFDGSNQ--------------------LQLFQNIL  100 (568)
Q Consensus        53 YmAPEvl-~~~~ys~ksDIWSlGviL~ELlt-----------G~~PF~g~~~--------------------~~~~~~Il  100 (568)
                      |+|||++ ....|+.++|||||||++|||++           |+++|.|...                    .+.+..+.
T Consensus       249 Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~  328 (458)
T 3rp9_A          249 YRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIF  328 (458)
T ss_dssp             TCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHH
T ss_pred             ccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHH
Confidence            9999986 46679999999999999999998           7777876541                    12222222


Q ss_pred             hccC-------------------CCCC-------CCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370          101 TSTE-------------------LRFP-------PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus       101 ~~~~-------------------~~~p-------~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      ....                   ..++       ...+...++++.+||.+||..||.+|||++|+++||||..+.+.
T Consensus       329 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~~  406 (458)
T 3rp9_A          329 NILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA  406 (458)
T ss_dssp             HHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCCG
T ss_pred             HHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCCC
Confidence            1000                   0000       01123458899999999999999999999999999999887654

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.92  E-value=2.6e-26  Score=241.34  Aligned_cols=137  Identities=11%  Similarity=0.111  Sum_probs=110.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccC-----------CCCcccch
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-----------KYDAKADL   70 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~-----------~ys~ksDI   70 (568)
                      |..||+||||||+|||++.++   .+||+|||+++....  .....+| +.|+|||++.+.           .|+.++||
T Consensus       223 H~~~ivHrDikp~NIll~~~~---~~kL~DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Dv  296 (377)
T 3byv_A          223 HHYGLVHTYLRPVDIVLDQRG---GVFLTGFEHLVRDGA--RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDA  296 (377)
T ss_dssp             HHTTEECSCCCGGGEEECTTC---CEEECCGGGCEETTC--EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHH
T ss_pred             HhCCeecCCCCHHHEEEcCCC---CEEEEechhheecCC--cccCCCC-cCccChhhhcccccccccccccccCChhhhH
Confidence            456999999999999999876   799999999987433  3445678 999999999877           89999999


Q ss_pred             hhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           71 WSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        71 WSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      |||||++|+|++|+.||.+.+.......+..         ....+++++.+||.+||..||.+||++.++++||||..+.
T Consensus       297 wSlG~il~elltg~~Pf~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  367 (377)
T 3byv_A          297 WALGLVIYWIWCADLPITKDAALGGSEWIFR---------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLR  367 (377)
T ss_dssp             HHHHHHHHHHHHSSCCC------CCSGGGGS---------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCcccccccchhhhhh---------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHHH
Confidence            9999999999999999987654333222211         1236789999999999999999999999999999999887


Q ss_pred             Hhh
Q 008370          151 QTV  153 (568)
Q Consensus       151 ~~~  153 (568)
                      ...
T Consensus       368 ~~~  370 (377)
T 3byv_A          368 TEL  370 (377)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.92  E-value=7.4e-26  Score=243.06  Aligned_cols=145  Identities=25%  Similarity=0.341  Sum_probs=115.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..+||||||||+|||++.++. ..+||+|||+++....  ...+.+||+.|+|||++.+..|+.++|||||||++|+|+
T Consensus       217 H~~~ivHrDlKp~NILl~~~~~-~~vkL~DFG~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell  293 (429)
T 3kvw_A          217 HKNRIIHCDLKPENILLKQQGR-SGIKVIDFGSSCYEHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELL  293 (429)
T ss_dssp             HHHTEECSCCSGGGEEESSTTS-CCEEECCCTTCEETTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHH
T ss_pred             HHCCeecCCCCHHHeEEccCCC-cceEEeecccceecCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHH
Confidence            4458999999999999998762 2499999999977543  344678999999999999999999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCC-------------------C----------------------------CC----
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRF-------------------P----------------------------PG----  110 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~-------------------p----------------------------~~----  110 (568)
                      +|.+||.+.+..+.+..+......+.                   |                            +.    
T Consensus       294 tG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  373 (429)
T 3kvw_A          294 TGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREW  373 (429)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCH
T ss_pred             hCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhh
Confidence            99999999888777666553211000                   0                            00    


Q ss_pred             ---cccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370          111 ---AIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       111 ---~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                         .....++.+.+||.+||..||.+|||++|+++||||...
T Consensus       374 ~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          374 GNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR  415 (429)
T ss_dssp             HHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred             HhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence               001236789999999999999999999999999999764

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.92  E-value=1.2e-25  Score=230.27  Aligned_cols=147  Identities=20%  Similarity=0.369  Sum_probs=115.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++.  .+||+|||+++...........+|++.|+|||++.+ ..++.++|||||||++|+|
T Consensus       147 H~~~ivH~Dikp~Nil~~~~~~--~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l  224 (330)
T 3nsz_A          147 HSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASM  224 (330)
T ss_dssp             HHTTEECCCCSGGGEEEETTTT--EEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred             HhCCeeeCCCCHHHEEEcCCCC--EEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHH
Confidence            5569999999999999986653  699999999998776666667789999999999976 6789999999999999999


Q ss_pred             HhCCCCCCCC-cHHHHHHHHHh------------ccCCCC--------------------CCCcccccCHHHHHHHHHhh
Q 008370           81 VTGKPPFDGS-NQLQLFQNILT------------STELRF--------------------PPGAIEELHPDCVDLCRCLL  127 (568)
Q Consensus        81 ltG~~PF~g~-~~~~~~~~Il~------------~~~~~~--------------------p~~~~~~ls~~~~dLI~~cL  127 (568)
                      ++|+.||... ...+.+..+..            ......                    +......+++++.+||.+||
T Consensus       225 l~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  304 (330)
T 3nsz_A          225 IFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLL  304 (330)
T ss_dssp             HHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTS
T ss_pred             HhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHh
Confidence            9999999543 33332222211            001111                    11112336899999999999


Q ss_pred             ccCCCCCCCHHHHHhchhHHHhH
Q 008370          128 RQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus       128 ~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ..||.+|||++|+++||||..+.
T Consensus       305 ~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          305 RYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             CSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             cCCcccCCCHHHHhcCccHhhhc
Confidence            99999999999999999997654

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.92  E-value=2.7e-25  Score=242.59  Aligned_cols=140  Identities=30%  Similarity=0.594  Sum_probs=122.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCC-CcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKY-DAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~y-s~ksDIWSlGviL~E   79 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++.........+.+||+.|+|||++.+..+ +.++||||+||++|+
T Consensus       132 LH~~givHrDLkp~NIll~~~~---~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~e  208 (476)
T 2y94_A          132 CHRHMVVHRDLKPENVLLDAHM---NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYA  208 (476)
T ss_dssp             HHTTTEECSCCSGGGEEECTTC---CEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHH
T ss_pred             HHHCCCCcccccHHHEEEecCC---CeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHH
Confidence            3567999999999999999877   699999999998876666677899999999999988766 678999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      |++|+.||.+.+....+.++... ....|    ..+++.+.+||.+||..||.+|||++++++||||..
T Consensus       209 lltG~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~  272 (476)
T 2y94_A          209 LLCGTLPFDDDHVPTLFKKICDG-IFYTP----QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ  272 (476)
T ss_dssp             HHHSSCSSCCSSSHHHHHHHHTT-CCCCC----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred             HhhCCCCCCCCCHHHHHHHHhcC-CcCCC----ccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence            99999999998888887777654 23333    357889999999999999999999999999999975

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.92  E-value=6.6e-26  Score=237.75  Aligned_cols=143  Identities=28%  Similarity=0.563  Sum_probs=103.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcc-cchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~k-sDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++ .+.+||+|||+++...........+||+.|+|||++.+..+..+ +||||+||++|+|
T Consensus       133 H~~~ivH~Dlkp~Nill~~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el  211 (361)
T 3uc3_A          133 HSMQICHRDLKLENTLLDGSP-APRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVM  211 (361)
T ss_dssp             HHTTCCSCCCCGGGEEECSSS-SCCEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHH
T ss_pred             HHCCcccCCCCHHHEEEcCCC-CceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHH
Confidence            557999999999999998665 23599999999986554445556789999999999988888766 8999999999999


Q ss_pred             HhCCCCCCCCcH----HHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           81 VTGKPPFDGSNQ----LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        81 ltG~~PF~g~~~----~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ++|+.||.+...    ...+..+... ...+|.  ...+++.+.+||.+||..||.+|||++|+++||||..
T Consensus       212 l~g~~Pf~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~  280 (361)
T 3uc3_A          212 LVGAYPFEDPEEPRDYRKTIQRILSV-KYSIPD--DIRISPECCHLISRIFVADPATRISIPEIKTHSWFLK  280 (361)
T ss_dssp             HHSSCSCC----CCCHHHHHHHHHTT-CCCCCT--TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHT
T ss_pred             HhCCCCCCCCccHHHHHHHHHHHhcC-CCCCCC--cCCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhc
Confidence            999999987543    3334444332 333333  2357899999999999999999999999999999954

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.92  E-value=4.6e-26  Score=231.92  Aligned_cols=148  Identities=28%  Similarity=0.462  Sum_probs=111.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--------CCccccCCCcccChhhhcc-----CCCCccc
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--------LADTLCGSPLYMAPEIIQN-----HKYDAKA   68 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--------~~~t~~GT~~YmAPEvl~~-----~~ys~ks   68 (568)
                      |..+|+||||||+|||++.++....+||+|||+++......        .....+||+.|+|||++..     ..++.++
T Consensus       128 H~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  207 (316)
T 2ac3_A          128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRC  207 (316)
T ss_dssp             HHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTH
T ss_pred             HhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCccc
Confidence            45699999999999999987755569999999997654221        2234579999999999865     5688999


Q ss_pred             chhhHHHHHHHHHhCCCCCCCCcH---------------HHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCC
Q 008370           69 DLWSVGAILFQLVTGKPPFDGSNQ---------------LQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        69 DIWSlGviL~ELltG~~PF~g~~~---------------~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      |||||||++|+|++|+.||.+...               ...+..+.. ....++...+..+++.+.+|+.+||..||.+
T Consensus       208 DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  286 (316)
T 2ac3_A          208 DLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE-GKYEFPDKDWAHISCAAKDLISKLLVRDAKQ  286 (316)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHH-CCCCCCHHHHTTSCHHHHHHHHHHSCSSTTT
T ss_pred             ccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhc-cCcccCchhcccCCHHHHHHHHHHhhCChhh
Confidence            999999999999999999987532               223344433 3444444334467899999999999999999


Q ss_pred             CCCHHHHHhchhHHHhH
Q 008370          134 RITFKEFFNHRFLGELR  150 (568)
Q Consensus       134 RpTaeElL~Hpff~~~~  150 (568)
                      |||++|+++||||....
T Consensus       287 Rps~~e~l~hp~~~~~~  303 (316)
T 2ac3_A          287 RLSAAQVLQHPWVQGCA  303 (316)
T ss_dssp             SCCHHHHHHSTTCC---
T ss_pred             CCCHHHHhcChhhcCCC
Confidence            99999999999997654

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.92  E-value=2.3e-25  Score=231.27  Aligned_cols=144  Identities=26%  Similarity=0.444  Sum_probs=117.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccC-CCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+|||++.++   .+||+|||+++..... ......+||+.|+|||++.+. .++.++|||||||++|+
T Consensus       129 H~~~ivH~Dlkp~Nil~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~e  205 (346)
T 1ua2_A          129 HQHWILHRDLKPNNLLLDENG---VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAE  205 (346)
T ss_dssp             HHTTCCCCCCCGGGEEECTTC---CEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHH
T ss_pred             HHCCEECCCCCHHHEEEcCCC---CEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHH
Confidence            456999999999999999877   6999999999876432 344567899999999999654 58899999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCC----CCC-------------------CcccccCHHHHHHHHHhhccCCCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELR----FPP-------------------GAIEELHPDCVDLCRCLLRQNPVERIT  136 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~----~p~-------------------~~~~~ls~~~~dLI~~cL~~dP~~RpT  136 (568)
                      |++|.+||.+.+..+.+..+.......    ++.                   .....++.++.+||.+||..||.+|||
T Consensus       206 ll~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt  285 (346)
T 1ua2_A          206 LLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT  285 (346)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC
Confidence            999999999998888777766432111    000                   001345689999999999999999999


Q ss_pred             HHHHHhchhHHH
Q 008370          137 FKEFFNHRFLGE  148 (568)
Q Consensus       137 aeElL~Hpff~~  148 (568)
                      ++|+++||||..
T Consensus       286 ~~ell~h~~f~~  297 (346)
T 1ua2_A          286 ATQALKMKYFSN  297 (346)
T ss_dssp             HHHHHTSGGGTS
T ss_pred             HHHHhcChhhhc
Confidence            999999999964

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.92  E-value=1.2e-25  Score=250.55  Aligned_cols=146  Identities=23%  Similarity=0.485  Sum_probs=122.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..|||||||||+|||++.++   .+||+|||+++...........+||+.|+|||++.+..|+.++|||||||++|+|
T Consensus       302 LH~~gIvHrDLKPeNILld~~g---~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeL  378 (576)
T 2acx_A          302 LHRERIVYRDLKPENILLDDHG---HIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM  378 (576)
T ss_dssp             HHHTTEECCCCCGGGEEECTTS---CEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHH
T ss_pred             HHHCCEeccCCchheEEEeCCC---CeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHH
Confidence            3557999999999999999877   7999999999987766555667999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCc----HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHH
Q 008370           81 VTGKPPFDGSN----QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQ  151 (568)
Q Consensus        81 ltG~~PF~g~~----~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~  151 (568)
                      ++|..||.+..    ...+...+.. ....++    ..+++++.+||.+||..||.+||     +++|+++||||..+.|
T Consensus       379 ltG~~PF~~~~~~~~~~~i~~~i~~-~~~~~p----~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w  453 (576)
T 2acx_A          379 IAGQSPFQQRKKKIKREEVERLVKE-VPEEYS----ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNF  453 (576)
T ss_dssp             HHSSCSSSCSSSCCCHHHHHHHHHH-CCCCCC----TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCH
T ss_pred             HhCCCCCcccccchhHHHHHHHhhc-ccccCC----ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCH
Confidence            99999998753    2334444433 233333    46889999999999999999999     7999999999998877


Q ss_pred             hhh
Q 008370          152 TVH  154 (568)
Q Consensus       152 ~~~  154 (568)
                      ...
T Consensus       454 ~~l  456 (576)
T 2acx_A          454 KRL  456 (576)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            544

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.92  E-value=2.8e-25  Score=228.48  Aligned_cols=149  Identities=23%  Similarity=0.344  Sum_probs=115.4

Q ss_pred             CCCCCeEecCCCCCCeEEecCC----------------CCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCC
Q 008370            1 MCYVFMIVSANACQNLLVSTNE----------------VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKY   64 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~----------------~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~y   64 (568)
                      ||..||+||||||+|||+..++                ....+||+|||+++....  .....+||+.|+|||++.+..+
T Consensus       139 lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~  216 (355)
T 2eu9_A          139 LHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE--HHTTIVATRHYRPPEVILELGW  216 (355)
T ss_dssp             HHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS--CCCSSCSCGGGCCHHHHTTCCC
T ss_pred             HHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccc--cccCCcCCCcccCCeeeecCCC
Confidence            4567999999999999994321                223799999999987543  2345689999999999999999


Q ss_pred             CcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCC-----------------------------------
Q 008370           65 DAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPP-----------------------------------  109 (568)
Q Consensus        65 s~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~-----------------------------------  109 (568)
                      +.++|||||||++|+|++|..||.+....+.+..+..... .+|.                                   
T Consensus       217 ~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (355)
T 2eu9_A          217 AQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILG-PIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKP  295 (355)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC-CCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCC
T ss_pred             CCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC-CCcHHHhhhccchhhhcccccccccccchhccccccCCc
Confidence            9999999999999999999999998876655444332110 1110                                   


Q ss_pred             -----CcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370          110 -----GAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus       110 -----~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                           ......+..+.+||.+||..||.+|||+.|+++||||..+.+.
T Consensus       296 ~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~  343 (355)
T 2eu9_A          296 LKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPE  343 (355)
T ss_dssp             GGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCHH
T ss_pred             ccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCChh
Confidence                 0001224578899999999999999999999999999877554

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.92  E-value=4.8e-26  Score=233.28  Aligned_cols=149  Identities=32%  Similarity=0.546  Sum_probs=118.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc---cCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~---~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++....+||+|||+++...........+||+.|+|||++.   ...++.++|||||||++|
T Consensus       131 H~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~  210 (322)
T 2ycf_A          131 HENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF  210 (322)
T ss_dssp             HHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHH
T ss_pred             HHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHH
Confidence            45699999999999999987655579999999998876544445668999999999974   467889999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +|++|..||.+......+...+......+.+..+..++..+.+|+.+||..||.+||+++++++||||....
T Consensus       211 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~~  282 (322)
T 2ycf_A          211 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDED  282 (322)
T ss_dssp             HHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCHH
T ss_pred             HHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCHH
Confidence            999999999865433222222222333333334456789999999999999999999999999999997654

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.92  E-value=2.3e-25  Score=227.25  Aligned_cols=147  Identities=24%  Similarity=0.362  Sum_probs=115.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCC----------------CCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCC
Q 008370            2 CYVFMIVSANACQNLLVSTNEV----------------TPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYD   65 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~----------------~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys   65 (568)
                      |..||+||||||+|||++..+.                .+.+||+|||+++....  .....+||+.|+|||++.+..++
T Consensus       135 H~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~  212 (339)
T 1z57_A          135 HSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE--HHSTLVSTRHYRAPEVILALGWS  212 (339)
T ss_dssp             HHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS--CCCSSCSCGGGCCHHHHTTSCCC
T ss_pred             HHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcc--ccccccCCccccChHHhhCCCCC
Confidence            5569999999999999987431                23699999999987543  23456899999999999998999


Q ss_pred             cccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCC------------------------------------
Q 008370           66 AKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPP------------------------------------  109 (568)
Q Consensus        66 ~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~------------------------------------  109 (568)
                      .++|||||||++|+|++|..||.+.+..+....+.... ..+|.                                    
T Consensus       213 ~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (339)
T 1z57_A          213 QPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERIL-GPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPL  291 (339)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHH-CSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCG
T ss_pred             cchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHh-CCCCHHHHhhccchhHHhhccccccccccccchhhhcCcch
Confidence            99999999999999999999999887665544332211 01110                                    


Q ss_pred             ----CcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370          110 ----GAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       110 ----~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                          ......++.+.+|+.+||..||.+|||+.|+++||||..++.
T Consensus       292 ~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  337 (339)
T 1z57_A          292 KEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK  337 (339)
T ss_dssp             GGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred             hhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHhc
Confidence                001123567899999999999999999999999999987653

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.92  E-value=1.1e-25  Score=228.55  Aligned_cols=148  Identities=24%  Similarity=0.504  Sum_probs=110.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+|||++.++   .+||+|||+++..... ......+||+.|+|||++.+ ..++.++||||+||++|+
T Consensus       119 H~~~ivH~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~  195 (311)
T 4agu_A          119 HKHNCIHRDVKPENILITKHS---VIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAE  195 (311)
T ss_dssp             HHTTEECCCCSGGGEEECTTS---CEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHH
T ss_pred             HHCCCcCCCCChhhEEEcCCC---CEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHH
Confidence            456999999999999998876   7999999999876533 33456689999999999876 678999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccC------------------CCCCC--C------cccccCHHHHHHHHHhhccCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTE------------------LRFPP--G------AIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~------------------~~~p~--~------~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      |++|..||.+....+....+.....                  ...+.  .      ....+++.+.+|+.+||..||.+
T Consensus       196 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  275 (311)
T 4agu_A          196 LLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTE  275 (311)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTT
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhh
Confidence            9999999999887666554432110                  01110  0      01356788999999999999999


Q ss_pred             CCCHHHHHhchhHHHhHHh
Q 008370          134 RITFKEFFNHRFLGELRQT  152 (568)
Q Consensus       134 RpTaeElL~Hpff~~~~~~  152 (568)
                      |||++|+++||||+.+++.
T Consensus       276 Rpt~~ell~hp~f~~~~~~  294 (311)
T 4agu_A          276 RLTCEQLLHHPYFENIREI  294 (311)
T ss_dssp             SCCHHHHHTSGGGTTCC--
T ss_pred             cCCHHHHhcChHHHhccCH
Confidence            9999999999999876543

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.92  E-value=1e-25  Score=232.38  Aligned_cols=149  Identities=28%  Similarity=0.417  Sum_probs=111.2

Q ss_pred             CCCCeEecCCCCCCeEEecCC--CCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccC-CCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNE--VTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~--~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL   77 (568)
                      |..+|+||||||+|||++.++  ....+||+|||+++..... ......+||+.|+|||++.+. .++.++|||||||++
T Consensus       149 H~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  228 (329)
T 3gbz_A          149 HSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIW  228 (329)
T ss_dssp             HHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHH
T ss_pred             HhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHH
Confidence            456999999999999996543  2346999999999876532 234456789999999999774 589999999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCC-------------------------cccccCHHHHHHHHHhhccCCC
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPG-------------------------AIEELHPDCVDLCRCLLRQNPV  132 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~-------------------------~~~~ls~~~~dLI~~cL~~dP~  132 (568)
                      |+|++|..||.+....+.+..+...........                         ....+++++.+||.+||..||.
T Consensus       229 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  308 (329)
T 3gbz_A          229 AEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPV  308 (329)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGG
T ss_pred             HHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChh
Confidence            999999999999888777776654321111000                         0012578999999999999999


Q ss_pred             CCCCHHHHHhchhHHHhH
Q 008370          133 ERITFKEFFNHRFLGELR  150 (568)
Q Consensus       133 ~RpTaeElL~Hpff~~~~  150 (568)
                      +|||++|+++||||+...
T Consensus       309 ~R~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          309 KRISAKNALEHPYFSHND  326 (329)
T ss_dssp             GSCCHHHHHTSGGGSSSC
T ss_pred             hCCCHHHHhCCcccCCCC
Confidence            999999999999997653

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.91  E-value=9.2e-26  Score=237.67  Aligned_cols=147  Identities=20%  Similarity=0.335  Sum_probs=110.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC--------CCCccccCCCcccChhhhcc--CCCCcccchh
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ--------DLADTLCGSPLYMAPEIIQN--HKYDAKADLW   71 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~--------~~~~t~~GT~~YmAPEvl~~--~~ys~ksDIW   71 (568)
                      |..+|+||||||+|||++.++   .+||+|||++......        ......+||+.|+|||++.+  ..|+.++|||
T Consensus       145 H~~~ivHrDlkp~NIll~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diw  221 (389)
T 3gni_B          145 HHMGYVHRSVKASHILISVDG---KVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIY  221 (389)
T ss_dssp             HHTTEECCCCSGGGEEECTTC---CEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHH
T ss_pred             HhCCeecCCCCHHHEEEcCCC---CEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHH
Confidence            456999999999999999877   7999999998754221        12234579999999999987  6799999999


Q ss_pred             hHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCC-----------------------------------------CCCC
Q 008370           72 SVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELR-----------------------------------------FPPG  110 (568)
Q Consensus        72 SlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~-----------------------------------------~p~~  110 (568)
                      ||||++|+|++|+.||.+.+..+.+..++......                                         ....
T Consensus       222 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (389)
T 3gni_B          222 SVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHP  301 (389)
T ss_dssp             HHHHHHHHHHHSSCTTTTCCSTTHHHHC----------------------------------------------------
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCc
Confidence            99999999999999998766544433322211000                                         0001


Q ss_pred             cccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370          111 AIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       111 ~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      .+..+++.+.+||.+||+.||.+|||++|+++||||..+.+
T Consensus       302 ~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~  342 (389)
T 3gni_B          302 YHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR  342 (389)
T ss_dssp             ----CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred             cccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence            23456788999999999999999999999999999987754

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.91  E-value=3.3e-25  Score=224.99  Aligned_cols=146  Identities=27%  Similarity=0.484  Sum_probs=122.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+||++..++..+.+||+|||+++.... ......+||+.|+|||++.+..++.++||||+||++|+|+
T Consensus       123 H~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  201 (304)
T 2jam_A          123 HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN-GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL  201 (304)
T ss_dssp             HHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC-BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHH
T ss_pred             HHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC-CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHH
Confidence            456999999999999995433334799999999976443 2344567999999999999999999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +|..||.+.........+... ...++...+..+++.+.+|+.+||..||.+||+++++++||||...
T Consensus       202 ~g~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          202 CGYPPFYEETESKLFEKIKEG-YYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             HSSCTTTTSCHHHHHHHHHHC-CCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSS
T ss_pred             HCCCCCCCCCHHHHHHHHHcC-CCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCccccCC
Confidence            999999998887777777654 3344444556788999999999999999999999999999999653

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.91  E-value=3.8e-25  Score=245.21  Aligned_cols=145  Identities=23%  Similarity=0.507  Sum_probs=121.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.+.... .....+||+.|+|||++.+..|+.++|||||||++|||
T Consensus       306 H~~gIvHrDLKP~NILl~~~g---~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyel  382 (543)
T 3c4z_A          306 HQRNIIYRDLKPENVLLDDDG---NVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEM  382 (543)
T ss_dssp             HHTTEECCCCCGGGEEECTTS---CEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HHcCCcccCCChHHEEEeCCC---CEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHH
Confidence            457999999999999999877   79999999998876443 34456999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCc----HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHH
Q 008370           81 VTGKPPFDGSN----QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQ  151 (568)
Q Consensus        81 ltG~~PF~g~~----~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~  151 (568)
                      ++|+.||.+.+    ..+....+... ...+|    ..+++.+.+||.+||..||.+||+     ++++++||||..+.|
T Consensus       383 ltG~~PF~~~~~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w  457 (543)
T 3c4z_A          383 IAARGPFRARGEKVENKELKQRVLEQ-AVTYP----DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISW  457 (543)
T ss_dssp             HHSSCSSCCTTCCCCHHHHHHHHHHC-CCCCC----TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCH
T ss_pred             HhCCCCCCCCccchhHHHHHHHHhhc-ccCCC----cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCH
Confidence            99999998753    34555555543 33333    467899999999999999999996     589999999998877


Q ss_pred             hhh
Q 008370          152 TVH  154 (568)
Q Consensus       152 ~~~  154 (568)
                      ...
T Consensus       458 ~~l  460 (543)
T 3c4z_A          458 RQL  460 (543)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            643

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.91  E-value=3.8e-25  Score=222.97  Aligned_cols=145  Identities=28%  Similarity=0.573  Sum_probs=123.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc------cCCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ------NHKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~------~~~ys~ksDIWSlGv   75 (568)
                      |..||+||||||+||+++.++   .+||+|||+++...........+|++.|+|||++.      ...++.++|||||||
T Consensus       141 H~~~i~H~dl~p~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~  217 (298)
T 1phk_A          141 HKLNIVHRDLKPENILLDDDM---NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV  217 (298)
T ss_dssp             HHTTEECSCCSGGGEEECTTC---CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHH
T ss_pred             HHCCcccCCCCcceEEEcCCC---cEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHH
Confidence            456999999999999998876   69999999998877666666778999999999985      456888999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|+|++|..||.+.+.......+... ...++...+..++..+.+|+.+||..||.+||++.++++||||....
T Consensus       218 ~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          218 IMYTLLAGSPPFWHRKQMLMLRMIMSG-NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHT-CCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             HHHHHHHCCCCCcCccHHHHHHHHhcC-CcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            999999999999988887777766654 33444444567889999999999999999999999999999997653

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.91  E-value=5.6e-25  Score=220.25  Aligned_cols=140  Identities=30%  Similarity=0.569  Sum_probs=115.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++   .+||+|||++...... ......|++.|+|||++.+..++.++||||+|+++|+|
T Consensus       125 LH~~~i~H~dlkp~Nili~~~~---~~~l~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  200 (279)
T 3fdn_A          125 CHSKRVIHRDIKPENLLLGSAG---ELKIADFGWSVHAPSS-RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF  200 (279)
T ss_dssp             HHTTTCEECCCCGGGEEECTTS---CEEECSCCEESCC---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             HHhCCEecccCChHhEEEcCCC---CEEEEeccccccCCcc-cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHH
Confidence            3567999999999999998877   6999999998654432 23456899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++|..||.+.+..+....+... ...+|    ..+++.+.+|+.+||..||.+||+++|+++||||...
T Consensus       201 ~~g~~p~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~  264 (279)
T 3fdn_A          201 LVGKPPFEANTYQETYKRISRV-EFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN  264 (279)
T ss_dssp             HHSSCTTCCSSHHHHHHHHHHT-CCCCC----TTSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             HHCCCCCCCCcHHHHHHHHHhC-CCCCC----CcCCHHHHHHHHHHhccChhhCCCHHHHhhCccccCC
Confidence            9999999998887777766543 33333    3578899999999999999999999999999999764

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.91  E-value=4.8e-25  Score=233.75  Aligned_cols=141  Identities=30%  Similarity=0.588  Sum_probs=109.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhcc-----------CCCCc
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQN-----------HKYDA   66 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~-----------~~ys~   66 (568)
                      ||..+|+||||||+|||++. +   .+||+|||+++.+....   .....+||+.|+|||++.+           ..|+.
T Consensus       171 lH~~~ivHrDlkp~NIll~~-~---~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~  246 (390)
T 2zmd_A          171 IHQHGIVHSDLKPANFLIVD-G---MLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISP  246 (390)
T ss_dssp             HHTTTCCCCCCCGGGEEESS-S---CEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCH
T ss_pred             HHHCCeeecCCCHHHEEEEC-C---eEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCC
Confidence            35679999999999999954 3   69999999998765332   2346789999999999865           36889


Q ss_pred             ccchhhHHHHHHHHHhCCCCCCCCc-HHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhch
Q 008370           67 KADLWSVGAILFQLVTGKPPFDGSN-QLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHR  144 (568)
Q Consensus        67 ksDIWSlGviL~ELltG~~PF~g~~-~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hp  144 (568)
                      ++|||||||++|+|++|+.||.+.. ....+..++... ...++    ...+..+.+||.+||..||.+||++.|+++||
T Consensus       247 ~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp  322 (390)
T 2zmd_A          247 KSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP----DIPEKDLQDVLKCCLKRDPKQRISIPELLAHP  322 (390)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCC----CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSH
T ss_pred             hhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCC----ccchHHHHHHHHHHcccChhhCCCHHHHhhCc
Confidence            9999999999999999999998754 334444454332 12222    34578899999999999999999999999999


Q ss_pred             hHHHh
Q 008370          145 FLGEL  149 (568)
Q Consensus       145 ff~~~  149 (568)
                      ||...
T Consensus       323 ~~~~~  327 (390)
T 2zmd_A          323 YVQIQ  327 (390)
T ss_dssp             HHHSC
T ss_pred             Ccccc
Confidence            99643

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.91  E-value=8.4e-26  Score=241.34  Aligned_cols=139  Identities=13%  Similarity=0.120  Sum_probs=115.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhh----------ccCCCCcccchh
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII----------QNHKYDAKADLW   71 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl----------~~~~ys~ksDIW   71 (568)
                      |..+||||||||+|||++.++   .+||+|||+++.....  ....+| +.|+|||++          ....|+.++|||
T Consensus       228 H~~~iiHrDiKp~NILl~~~~---~~kL~DFG~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~Dvw  301 (413)
T 3dzo_A          228 HHYGLVHTYLRPVDIVLDQRG---GVFLTGFEHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTW  301 (413)
T ss_dssp             HHTTEECSCCCGGGEEECTTC---CEEECCGGGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHH
T ss_pred             HhCCcccCCcccceEEEecCC---eEEEEeccceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCchhhHH
Confidence            557999999999999999887   5999999999875533  456688 999999999          555688899999


Q ss_pred             hHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           72 SVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        72 SlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      ||||++|+|++|+.||.+.+..+....+..         ....+++.+.+||.+||..||.+||++.++++||||..+..
T Consensus       302 SlGvil~elltg~~Pf~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~~~  372 (413)
T 3dzo_A          302 TLGLAIYWIWCADLPNTDDAALGGSEWIFR---------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQLRT  372 (413)
T ss_dssp             HHHHHHHHHHHSSCCCCTTGGGSCSGGGGS---------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCcchhhhHHHHHh---------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHHHH
Confidence            999999999999999988765433322221         11256789999999999999999999999999999999876


Q ss_pred             hhhh
Q 008370          152 TVHA  155 (568)
Q Consensus       152 ~~~~  155 (568)
                      ....
T Consensus       373 ~~~~  376 (413)
T 3dzo_A          373 ELSA  376 (413)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6543

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.91  E-value=1.7e-25  Score=235.53  Aligned_cols=144  Identities=29%  Similarity=0.451  Sum_probs=107.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.....  ....+||+.|+|||++.+ ..|+.++||||+||++|+|
T Consensus       149 H~~givH~Dlkp~NIll~~~~---~~kL~DFG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  223 (367)
T 2fst_X          149 HSADIIHRDLKPSNLAVNEDC---ELKILDFGLARHTADE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL  223 (367)
T ss_dssp             HHTTCCCCCCCGGGEEECTTC---CEEECC-----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHH
T ss_pred             HHCCeeeCCCCHhhEEECCCC---CEEEeecccccccccc--CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHH
Confidence            456999999999999999877   6999999999875432  345689999999999876 6789999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCC----------------------CCCCC----cccccCHHHHHHHHHhhccCCCCC
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTEL----------------------RFPPG----AIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~----------------------~~p~~----~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      ++|+.||.+.+..+.+..+......                      ..+..    .....++.+.+||.+||..||.+|
T Consensus       224 l~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R  303 (367)
T 2fst_X          224 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR  303 (367)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGS
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccC
Confidence            9999999998887776666542110                      01110    112457889999999999999999


Q ss_pred             CCHHHHHhchhHHHhH
Q 008370          135 ITFKEFFNHRFLGELR  150 (568)
Q Consensus       135 pTaeElL~Hpff~~~~  150 (568)
                      ||++|+++||||....
T Consensus       304 ~t~~e~L~hp~~~~~~  319 (367)
T 2fst_X          304 ITAAQALAHAYFAQYH  319 (367)
T ss_dssp             CCHHHHHTSGGGTTTC
T ss_pred             cCHHHHhcChhhhhcc
Confidence            9999999999997654

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.91  E-value=2.6e-25  Score=223.86  Aligned_cols=147  Identities=28%  Similarity=0.515  Sum_probs=123.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+||+++.++....+||+|||+++............|++.|+|||++.+. ++.++||||||+++|+|+
T Consensus       138 H~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~  216 (287)
T 2wei_A          138 HKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILL  216 (287)
T ss_dssp             HHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHH
T ss_pred             HHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHH
Confidence            4569999999999999987655557999999999877655555566789999999998764 889999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +|..||.+.+..+....+... ...++...+..+++.+.+|+.+||..||.+|||+.++++||||.+..
T Consensus       217 ~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  284 (287)
T 2wei_A          217 SGTPPFYGKNEYDILKRVETG-KYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS  284 (287)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHC-CCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred             hCCCCCCCCCHHHHHHHHHcC-CCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhccc
Confidence            999999998887777766654 33333333456789999999999999999999999999999998764

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.91  E-value=2.1e-25  Score=236.70  Aligned_cols=147  Identities=22%  Similarity=0.356  Sum_probs=104.4

Q ss_pred             CCCCeEecCCCCCCeEEecC-CCCCcEEEeecccceecCCC----CCCccccCCCcccChhhhccC-CCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTN-EVTPVLKIGDFGFARSLTPQ----DLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~-~~~~vvKL~DFGlAr~l~~~----~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGv   75 (568)
                      |..||+||||||+|||+..+ ...+.+||+|||+++.....    ......+||+.|+|||++.+. .|+.++|||||||
T Consensus       145 H~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~  224 (405)
T 3rgf_A          145 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGC  224 (405)
T ss_dssp             HHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHH
T ss_pred             HhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHH
Confidence            55699999999999999543 22347999999999876432    233457899999999999874 5899999999999


Q ss_pred             HHHHHHhCCCCCCCCcH---------HHHHHHHHhccCCCCCCCcc----------------------------------
Q 008370           76 ILFQLVTGKPPFDGSNQ---------LQLFQNILTSTELRFPPGAI----------------------------------  112 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~---------~~~~~~Il~~~~~~~p~~~~----------------------------------  112 (568)
                      ++|+|++|++||.+...         .+.+..+......+.. ..+                                  
T Consensus       225 il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  303 (405)
T 3rgf_A          225 IFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPAD-KDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHK  303 (405)
T ss_dssp             HHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCT-TTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTT
T ss_pred             HHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCCh-hhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcC
Confidence            99999999999986543         2334444322111100 000                                  


Q ss_pred             cccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370          113 EELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       113 ~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ...++.+.+||.+||..||.+|||++|+++||||...
T Consensus       304 ~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~  340 (405)
T 3rgf_A          304 VKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED  340 (405)
T ss_dssp             CCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSS
T ss_pred             CCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccC
Confidence            0126788999999999999999999999999999653

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.91  E-value=5.7e-25  Score=229.72  Aligned_cols=138  Identities=29%  Similarity=0.496  Sum_probs=117.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc---cCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~---~~~ys~ksDIWSlGviL~   78 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++....   ....+||+.|+|||++.   ...++.++|||||||++|
T Consensus       171 H~~~ivH~Dlkp~NIll~~~~---~~kL~DfG~a~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~  244 (348)
T 1u5q_A          171 HSHNMIHRDVKAGNILLSEPG---LVKLGDFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI  244 (348)
T ss_dssp             HHTTCBCCCCSGGGEEEETTT---EEEECCCTTCBSSSS---BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHH
T ss_pred             HhCCeeeCCCCHHHEEECCCC---CEEEeeccCceecCC---CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHH
Confidence            456999999999999999877   799999999987543   24568999999999984   567899999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      +|++|+.||.+.+....+..+.........   ....++.+.+||.+||..||.+|||++++++||||..
T Consensus       245 ell~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~  311 (348)
T 1u5q_A          245 ELAERKPPLFNMNAMSALYHIAQNESPALQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  311 (348)
T ss_dssp             HHHHSSCTTTTSCHHHHHHHHHHSCCCCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred             HHHhCCCCCCCCChHHHHHHHHhcCCCCCC---CCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence            999999999988877777766655433222   2467889999999999999999999999999999964

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.91  E-value=1.2e-24  Score=218.43  Aligned_cols=140  Identities=30%  Similarity=0.549  Sum_probs=119.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+||+++.++   .+||+|||++...... .....+|++.|+|||++.+..++.++||||||+++|+|
T Consensus       130 lH~~~i~H~dl~p~Nil~~~~~---~~kl~Dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  205 (284)
T 2vgo_A          130 CHERKVIHRDIKPENLLMGYKG---ELKIADFGWSVHAPSL-RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEF  205 (284)
T ss_dssp             HHTTTEECCCCSGGGEEECTTC---CEEECCCTTCEECSSS-CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHH
T ss_pred             HHHCCceecCCCHHHEEEcCCC---CEEEecccccccCccc-ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHH
Confidence            3567999999999999998876   6999999999765432 33456899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++|..||.+....+....+... ...+|    ..++..+.+||.+||..||.+||+++++++||||...
T Consensus       206 ~~g~~pf~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~  269 (284)
T 2vgo_A          206 LVGMPPFDSPSHTETHRRIVNV-DLKFP----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN  269 (284)
T ss_dssp             HHSSCTTCCSSHHHHHHHHHTT-CCCCC----TTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred             HHCCCCCCCCCHhHHHHHHhcc-ccCCC----CcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence            9999999988877777666543 33333    3578899999999999999999999999999999754

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.91  E-value=4.6e-25  Score=228.70  Aligned_cols=140  Identities=29%  Similarity=0.519  Sum_probs=105.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhcc-----------CCCCcc
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQN-----------HKYDAK   67 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~-----------~~ys~k   67 (568)
                      |..+|+||||||+|||++. +   .+||+|||+++......   .....+||+.|+|||++.+           ..++.+
T Consensus       125 H~~~iiHrDikp~NIll~~-~---~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~  200 (343)
T 3dbq_A          125 HQHGIVHSDLKPANFLIVD-G---MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK  200 (343)
T ss_dssp             HHTTCCCCCCCGGGEEEET-T---EEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHH
T ss_pred             HhCCeecCCCCcceEEEEC-C---cEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCch
Confidence            4569999999999999974 3   69999999998765332   2345689999999999865           678889


Q ss_pred             cchhhHHHHHHHHHhCCCCCCCCc-HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           68 ADLWSVGAILFQLVTGKPPFDGSN-QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        68 sDIWSlGviL~ELltG~~PF~g~~-~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      +|||||||++|+|++|+.||.+.. ....+..+....   .....+...+..+.+|+.+||..||.+|||+.|+++||||
T Consensus       201 ~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~  277 (343)
T 3dbq_A          201 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN---HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV  277 (343)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTT---SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred             hhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCC---cccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccc
Confidence            999999999999999999998743 333344443321   1122223556789999999999999999999999999999


Q ss_pred             HH
Q 008370          147 GE  148 (568)
Q Consensus       147 ~~  148 (568)
                      ..
T Consensus       278 ~~  279 (343)
T 3dbq_A          278 QI  279 (343)
T ss_dssp             HS
T ss_pred             cc
Confidence            64

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.91  E-value=3e-25  Score=228.95  Aligned_cols=141  Identities=23%  Similarity=0.461  Sum_probs=113.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---CCCccccCCCcccChhhhccCCC-CcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---DLADTLCGSPLYMAPEIIQNHKY-DAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---~~~~t~~GT~~YmAPEvl~~~~y-s~ksDIWSlGviL   77 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.+...   ......+||+.|+|||++.+..+ +.++|||||||++
T Consensus       122 H~~givH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il  198 (323)
T 3tki_A          122 HGIGITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL  198 (323)
T ss_dssp             HHTTEECSCCSGGGEEECTTC---CEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHH
T ss_pred             HHCCccccccchHHEEEeCCC---CEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHH
Confidence            456999999999999999877   6999999999865322   23456789999999999987765 6789999999999


Q ss_pred             HHHHhCCCCCCCCcHHH-HHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           78 FQLVTGKPPFDGSNQLQ-LFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~-~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      |+|++|+.||.+..... .+..+... ....  ..+..+++.+.+|+.+||..||.+|||++|+++||||..
T Consensus       199 ~~ll~g~~pf~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~  267 (323)
T 3tki_A          199 TAMLAGELPWDQPSDSCQEYSDWKEK-KTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNK  267 (323)
T ss_dssp             HHHHHSSCSCSSSCTTSHHHHHHHTT-CTTS--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTC
T ss_pred             HHHHhCCCCCCCCchHHHHHHHHhcc-cccC--CccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcc
Confidence            99999999998765432 22222222 2211  224578899999999999999999999999999999964

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.91  E-value=2.9e-25  Score=232.05  Aligned_cols=145  Identities=29%  Similarity=0.479  Sum_probs=115.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhc-cCCCCcccchhhHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQ-NHKYDAKADLWSVGAI   76 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~-~~~ys~ksDIWSlGvi   76 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......    .....+||+.|+|||++. ...++.++||||+||+
T Consensus       145 H~~~ivH~Dikp~NIl~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i  221 (364)
T 3qyz_A          145 HSANVLHRDLKPSNLLLNTTC---DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCI  221 (364)
T ss_dssp             HHTTEECCCCCGGGEEECTTC---CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHH
T ss_pred             HHCCeecCCCChHhEEECCCC---CEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHH
Confidence            456999999999999999877   69999999998765332    234568999999999875 4558999999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCC-------------------CC--C-----CcccccCHHHHHHHHHhhccC
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELR-------------------FP--P-----GAIEELHPDCVDLCRCLLRQN  130 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~-------------------~p--~-----~~~~~ls~~~~dLI~~cL~~d  130 (568)
                      +|+|++|++||.+.+..+.+..+.......                   .+  .     .....+++++.+||.+||..|
T Consensus       222 l~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  301 (364)
T 3qyz_A          222 LAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFN  301 (364)
T ss_dssp             HHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCC
Confidence            999999999999887666665554211100                   00  0     011356789999999999999


Q ss_pred             CCCCCCHHHHHhchhHHHh
Q 008370          131 PVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       131 P~~RpTaeElL~Hpff~~~  149 (568)
                      |.+|||++|+++||||...
T Consensus       302 P~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          302 PHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             TTTSCCHHHHHTSGGGTTT
T ss_pred             hhhCCCHHHHhcCcchhhc
Confidence            9999999999999999765

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.91  E-value=5.2e-25  Score=236.33  Aligned_cols=147  Identities=27%  Similarity=0.441  Sum_probs=106.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----------------------CCccccCCCcccChhh
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----------------------LADTLCGSPLYMAPEI   58 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----------------------~~~t~~GT~~YmAPEv   58 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......                       .....+||+.|+|||+
T Consensus       146 H~~givHrDlkp~NILl~~~~---~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~  222 (432)
T 3n9x_A          146 HESGIIHRDLKPANCLLNQDC---SVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPEL  222 (432)
T ss_dssp             HHTTEECCCCCGGGEEECTTC---CEEECCCTTCEEC-------------------------------CCCCCTTCCHHH
T ss_pred             HHCCCCCCCCCHHHeEECCCC---CEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHH
Confidence            456999999999999998877   69999999998765322                       2356789999999998


Q ss_pred             h-ccCCCCcccchhhHHHHHHHHHh-----------CCCCCCCCc-----------------HHHHHHHHHhc-------
Q 008370           59 I-QNHKYDAKADLWSVGAILFQLVT-----------GKPPFDGSN-----------------QLQLFQNILTS-------  102 (568)
Q Consensus        59 l-~~~~ys~ksDIWSlGviL~ELlt-----------G~~PF~g~~-----------------~~~~~~~Il~~-------  102 (568)
                      + ....|+.++||||+||++|||++           |.++|.+.+                 ..+.+..+...       
T Consensus       223 ~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~  302 (432)
T 3n9x_A          223 ILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTED  302 (432)
T ss_dssp             HTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHH
T ss_pred             HhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHH
Confidence            6 55679999999999999999998           455555533                 12222222210       


Q ss_pred             ----------------cCCCCCC---CcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370          103 ----------------TELRFPP---GAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       103 ----------------~~~~~p~---~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                                      .....+.   .....+++++.+||.+||..||.+|||++|+++||||..+++
T Consensus       303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  370 (432)
T 3n9x_A          303 DLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK  370 (432)
T ss_dssp             HHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred             HHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence                            0000010   011357899999999999999999999999999999987754

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.91  E-value=2.7e-25  Score=231.09  Aligned_cols=146  Identities=23%  Similarity=0.374  Sum_probs=108.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++...........+||+.|+|||++.+ ..++.++||||+||++|+|
T Consensus       151 H~~~ivH~Dlkp~NIl~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l  227 (362)
T 3pg1_A          151 HEAGVVHRDLHPGNILLADNN---DITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM  227 (362)
T ss_dssp             HHTTCCCCCCCGGGEEECTTC---CEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHH
T ss_pred             HHCcCEecCCChHHEEEcCCC---CEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHH
Confidence            456999999999999998876   699999999987665555566789999999999876 6789999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccC-----------------------CCCCCC----cccccCHHHHHHHHHhhccCCCC
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTE-----------------------LRFPPG----AIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~-----------------------~~~p~~----~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      ++|+.||.+.+..+.+..+.....                       ...+..    .....++.+.+||.+||..||.+
T Consensus       228 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  307 (362)
T 3pg1_A          228 FNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQR  307 (362)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhh
Confidence            999999999887776666543211                       011111    11345788999999999999999


Q ss_pred             CCCHHHHHhchhHHHhH
Q 008370          134 RITFKEFFNHRFLGELR  150 (568)
Q Consensus       134 RpTaeElL~Hpff~~~~  150 (568)
                      |||+.|+++||||+.+.
T Consensus       308 Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          308 RISTEQALRHPYFESLF  324 (362)
T ss_dssp             SCCHHHHHTSGGGTTTC
T ss_pred             CCCHHHHHcCchhhhcc
Confidence            99999999999997763

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.91  E-value=1.7e-24  Score=219.83  Aligned_cols=142  Identities=25%  Similarity=0.467  Sum_probs=106.9

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc-----cCCCCcccchhhHHHHHHH
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~-----~~~ys~ksDIWSlGviL~E   79 (568)
                      ||+||||||+|||++.++   .+||+|||+++............||+.|+|||++.     ...++.++|||||||++|+
T Consensus       145 ~i~H~dlkp~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~  221 (318)
T 2dyl_A          145 GVIHRDVKPSNILLDERG---QIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVE  221 (318)
T ss_dssp             CCCCCCCCGGGEEECTTS---CEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHH
T ss_pred             CEEeCCCCHHHEEECCCC---CEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHH
Confidence            899999999999998876   69999999998766555555678999999999994     4568889999999999999


Q ss_pred             HHhCCCCCCCC-cHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           80 LVTGKPPFDGS-NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        80 LltG~~PF~g~-~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      |++|+.||... ...+.+..+.......++.  ...+++++.+||.+||..||.+||+++++++||||.....
T Consensus       222 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  292 (318)
T 2dyl_A          222 LATGQFPYKNCKTDFEVLTKVLQEEPPLLPG--HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYET  292 (318)
T ss_dssp             HHHSSCTTTTCCSHHHHHHHHHHSCCCCCCS--SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHHH
T ss_pred             HHhCCCCCCCCCccHHHHHHHhccCCCCCCc--cCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhccc
Confidence            99999999873 4555566666554333332  2357899999999999999999999999999999987653

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.91  E-value=5.8e-25  Score=230.83  Aligned_cols=144  Identities=29%  Similarity=0.439  Sum_probs=113.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++....  .....+||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus       161 H~~~ivH~Dikp~NIll~~~~---~~kL~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el  235 (371)
T 4exu_A          161 HSAGVVHRDLKPGNLAVNEDC---ELKILDFGLARHADA--EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM  235 (371)
T ss_dssp             HHTTCCCSCCCGGGEEECTTC---CEEECSTTCC----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHH
T ss_pred             HHCCCcCCCcCHHHeEECCCC---CEEEEecCccccccc--CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHH
Confidence            456999999999999999877   699999999986543  2345688999999999977 6789999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCC----------------------CCC----CcccccCHHHHHHHHHhhccCCCCC
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELR----------------------FPP----GAIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~----------------------~p~----~~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      ++|+.||.+.+..+.+..+.......                      .+.    ..+..+++.+.+||.+||..||.+|
T Consensus       236 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  315 (371)
T 4exu_A          236 LTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKR  315 (371)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTS
T ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhc
Confidence            99999999988777766665421110                      000    0123457899999999999999999


Q ss_pred             CCHHHHHhchhHHHhH
Q 008370          135 ITFKEFFNHRFLGELR  150 (568)
Q Consensus       135 pTaeElL~Hpff~~~~  150 (568)
                      ||++|+++||||..+.
T Consensus       316 pt~~ell~hp~f~~~~  331 (371)
T 4exu_A          316 LTAAQALTHPFFEPFR  331 (371)
T ss_dssp             CCHHHHHTSGGGTTTC
T ss_pred             CCHHHHhcCcccccCC
Confidence            9999999999997654

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.91  E-value=5.6e-25  Score=228.22  Aligned_cols=133  Identities=23%  Similarity=0.415  Sum_probs=112.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCC-CcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKY-DAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~y-s~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++...........+||+.|+|||++.+..+ +.++|||||||++|+|
T Consensus       147 H~~~ivH~Dlkp~NIll~~~~---~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el  223 (335)
T 3dls_A          147 RLKDIIHRDIKDENIVIAEDF---TIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTL  223 (335)
T ss_dssp             HHTTEECSCCSGGGEEECTTS---CEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHH
T ss_pred             HhCCeEEeccCHHHEEEcCCC---cEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHH
Confidence            456999999999999999876   699999999998876666667889999999999988777 7889999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ++|..||.....      .... ..    ..+..+++++.+||.+||..||.+|||++++++||||..
T Consensus       224 ~~g~~pf~~~~~------~~~~-~~----~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~  280 (335)
T 3dls_A          224 VFEENPFCELEE------TVEA-AI----HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ  280 (335)
T ss_dssp             HHSSCSCSSGGG------GTTT-CC----CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred             HhCCCchhhHHH------HHhh-cc----CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcCccccC
Confidence            999999976332      1111 11    122357899999999999999999999999999999964

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.91  E-value=6.5e-25  Score=226.86  Aligned_cols=146  Identities=29%  Similarity=0.446  Sum_probs=114.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----------CCccccCCCcccChhhhcc-CCCCcccc
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----------LADTLCGSPLYMAPEIIQN-HKYDAKAD   69 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----------~~~t~~GT~~YmAPEvl~~-~~ys~ksD   69 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......           .....+||+.|+|||++.. ..++.++|
T Consensus       129 H~~~ivH~Dlkp~Nil~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~D  205 (353)
T 2b9h_A          129 HGSNVIHRDLKPSNLLINSNC---DLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMD  205 (353)
T ss_dssp             HHTTEECSCCCGGGEEECTTC---CEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHH
T ss_pred             HHCCeecCCCCHHHeEEcCCC---cEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhh
Confidence            556999999999999998876   69999999998765321           1224578999999998764 67899999


Q ss_pred             hhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCC-----------------------CCC----CcccccCHHHHHH
Q 008370           70 LWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELR-----------------------FPP----GAIEELHPDCVDL  122 (568)
Q Consensus        70 IWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~-----------------------~p~----~~~~~ls~~~~dL  122 (568)
                      ||||||++|+|++|+.||.+.+..+.+..+.......                       .+.    ..+..+++++.+|
T Consensus       206 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  285 (353)
T 2b9h_A          206 VWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDL  285 (353)
T ss_dssp             HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHH
Confidence            9999999999999999999988666555443211100                       010    0113568899999


Q ss_pred             HHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370          123 CRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus       123 I~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      |.+||..||.+|||++|+++||||....
T Consensus       286 i~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          286 LQRMLVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             HHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             HHHhcCcCcccCCCHHHHhcCccccccC
Confidence            9999999999999999999999997654

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.91  E-value=2.5e-25  Score=230.54  Aligned_cols=147  Identities=33%  Similarity=0.591  Sum_probs=95.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++.++....+||+|||+++..... .....+||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       145 H~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  223 (336)
T 3fhr_A          145 HSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILL  223 (336)
T ss_dssp             HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-----------------------CHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHH
Confidence            4569999999999999987665567999999999876533 344568899999999998888999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHH---HHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           82 TGKPPFDGSNQLQLFQ---NILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~---~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +|..||.+........   .........++...+..+++.+.+|+.+||..||.+|||++|+++||||...
T Consensus       224 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          224 CGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             HSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             HCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcCcccccc
Confidence            9999998765443321   1112223344444456789999999999999999999999999999999753

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.91  E-value=3.4e-25  Score=231.65  Aligned_cols=143  Identities=24%  Similarity=0.294  Sum_probs=109.2

Q ss_pred             CCC-CeEecCCCCCCeEEecCC----------------------------------------------CCCcEEEeeccc
Q 008370            2 CYV-FMIVSANACQNLLVSTNE----------------------------------------------VTPVLKIGDFGF   34 (568)
Q Consensus         2 ~~~-~IIHrDLKP~NILL~~~~----------------------------------------------~~~vvKL~DFGl   34 (568)
                      |.. ||+||||||+|||++.++                                              ....+||+|||+
T Consensus       163 H~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~  242 (397)
T 1wak_A          163 HTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGN  242 (397)
T ss_dssp             HHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGG
T ss_pred             HHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccc
Confidence            445 999999999999998664                                              112699999999


Q ss_pred             ceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCCCCCCCCc------HHHHHHHHHhccCCCCC
Q 008370           35 ARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPFDGSN------QLQLFQNILTSTELRFP  108 (568)
Q Consensus        35 Ar~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~~PF~g~~------~~~~~~~Il~~~~~~~p  108 (568)
                      ++.....  ....+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+      ....+..+..... ..|
T Consensus       243 a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~p  319 (397)
T 1wak_A          243 ACWVHKH--FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLG-KVP  319 (397)
T ss_dssp             CEETTBC--SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHC-SCC
T ss_pred             ccccccc--CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcC-CCC
Confidence            9876532  345689999999999999999999999999999999999999998644      2222222221100 000


Q ss_pred             --------------------------------------CCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370          109 --------------------------------------PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus       109 --------------------------------------~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                                                            .......++.+.+||.+||..||.+|||++|+++||||.
T Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  396 (397)
T 1wak_A          320 RKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN  396 (397)
T ss_dssp             HHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGG
T ss_pred             hHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCcccc
Confidence                                                  001123356788999999999999999999999999995

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.91  E-value=3e-25  Score=231.82  Aligned_cols=145  Identities=28%  Similarity=0.508  Sum_probs=114.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhcc--CCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQN--HKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~--~~ys~ksDIWSlGviL   77 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++......  .....+||+.|+|||++.+  ..++.++|||||||++
T Consensus       176 H~~~ivH~Dlkp~NIll~~~~---~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il  252 (355)
T 1vzo_A          176 HKLGIIYRDIKLENILLDSNG---HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM  252 (355)
T ss_dssp             HHTTCCCCCCCGGGEEECTTS---CEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHH
T ss_pred             HHCCcccCCCCHHHEEECCCC---cEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHH
Confidence            456999999999999998877   69999999998764322  2345689999999999975  3578899999999999


Q ss_pred             HHHHhCCCCCCCCc----HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHH
Q 008370           78 FQLVTGKPPFDGSN----QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGE  148 (568)
Q Consensus        78 ~ELltG~~PF~g~~----~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~  148 (568)
                      |+|++|+.||....    .......+... ...+    +..++..+.+||.+||..||.+||     +++++++||||..
T Consensus       253 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~  327 (355)
T 1vzo_A          253 YELLTGASPFTVDGEKNSQAEISRRILKS-EPPY----PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQK  327 (355)
T ss_dssp             HHHHHSSCTTSCTTSCCCHHHHHHHHHHC-CCCC----CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred             HHHHHCCCCCccCCccchHHHHHHHHhcc-CCCC----CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence            99999999997532    23333334332 2222    346788999999999999999999     9999999999988


Q ss_pred             hHHhhh
Q 008370          149 LRQTVH  154 (568)
Q Consensus       149 ~~~~~~  154 (568)
                      +.+...
T Consensus       328 ~~~~~l  333 (355)
T 1vzo_A          328 INWDDL  333 (355)
T ss_dssp             CCHHHH
T ss_pred             CChhHh
Confidence            766543

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.91  E-value=5.1e-25  Score=225.87  Aligned_cols=144  Identities=24%  Similarity=0.463  Sum_probs=94.8

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhh----ccCCCCcccchhhHHHHHHHH
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII----QNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl----~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||+||||||+|||++.++   .+||+|||+++............||+.|+|||++    .+..++.++|||||||++|+|
T Consensus       146 ~ivH~dlkp~NIll~~~~---~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l  222 (327)
T 3aln_A          146 KIIHRDIKPSNILLDRSG---NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYEL  222 (327)
T ss_dssp             SCCCSCCCGGGEEEETTT---EEEECCCSSSCC------------------------------CCSHHHHHHHHHHHHHH
T ss_pred             CEeECCCCHHHEEEcCCC---CEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHH
Confidence            899999999999999877   7999999999876654444456899999999998    456789999999999999999


Q ss_pred             HhCCCCCCCCcHH-HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           81 VTGKPPFDGSNQL-QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        81 ltG~~PF~g~~~~-~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      ++|+.||.+.... +.+..+.......++......+++.+.+|+.+||..||.+||++.++++||||.....
T Consensus       223 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~  294 (327)
T 3aln_A          223 ATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEE  294 (327)
T ss_dssp             HHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHH
T ss_pred             HHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhHh
Confidence            9999999875432 2222222222233333334567899999999999999999999999999999987654

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.91  E-value=1.8e-24  Score=219.08  Aligned_cols=141  Identities=28%  Similarity=0.468  Sum_probs=119.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+||+++.++   .+||+|||+++...... ......||+.|+|||++.+..++.++|||||||++|+|
T Consensus       136 H~~~i~H~dl~p~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  212 (303)
T 3a7i_A          136 HSEKKIHRDIKAANVLLSEHG---EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIEL  212 (303)
T ss_dssp             HHTTEECCCCSGGGEEECTTS---CEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HHCCCccCCCChheEEECCCC---CEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHH
Confidence            456999999999999998876   69999999998765433 33456799999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++|..||...........+......    .....++..+.+|+.+||..||.+|||++++++||||...
T Consensus       213 ~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  277 (303)
T 3a7i_A          213 ARGEPPHSELHPMKVLFLIPKNNPP----TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRN  277 (303)
T ss_dssp             HHSSCTTTTSCHHHHHHHHHHSCCC----CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHH
T ss_pred             ccCCCCCCCcCHHHHHHHhhcCCCC----CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcC
Confidence            9999999988877766655544322    2334678899999999999999999999999999999654

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.90  E-value=1.7e-24  Score=224.90  Aligned_cols=144  Identities=28%  Similarity=0.431  Sum_probs=112.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.....  ....+||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus       143 H~~~ivH~dlkp~NIl~~~~~---~~kl~Dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el  217 (353)
T 3coi_A          143 HSAGVVHRDLKPGNLAVNEDC---ELKILDFGLARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEM  217 (353)
T ss_dssp             HHTTCCCSSCCGGGEEECTTC---CEEECSTTCTTC----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHH
T ss_pred             HHCCcccCCCCHHHEeECCCC---cEEEeecccccCCCCC--ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHH
Confidence            456999999999999999876   6999999999765432  345678999999999876 6789999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCC----------------------CC----CCCcccccCHHHHHHHHHhhccCCCCC
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTEL----------------------RF----PPGAIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~----------------------~~----p~~~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      ++|+.||.+.+..+.+..+......                      ..    .......+++.+.+||.+||..||.+|
T Consensus       218 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R  297 (353)
T 3coi_A          218 LTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKR  297 (353)
T ss_dssp             HHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTS
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccC
Confidence            9999999998876666555431100                      00    011224568899999999999999999


Q ss_pred             CCHHHHHhchhHHHhH
Q 008370          135 ITFKEFFNHRFLGELR  150 (568)
Q Consensus       135 pTaeElL~Hpff~~~~  150 (568)
                      ||+.++++||||....
T Consensus       298 pt~~e~l~hp~f~~~~  313 (353)
T 3coi_A          298 LTAAQALTHPFFEPFR  313 (353)
T ss_dssp             CCHHHHHTSGGGTTTC
T ss_pred             CCHHHHhcCcchhhcc
Confidence            9999999999997543

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.90  E-value=4e-25  Score=225.22  Aligned_cols=138  Identities=22%  Similarity=0.440  Sum_probs=108.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-------------CCccccCCCcccChhhhccCCCCccc
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-------------LADTLCGSPLYMAPEIIQNHKYDAKA   68 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-------------~~~t~~GT~~YmAPEvl~~~~ys~ks   68 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......             .....+||+.|+|||++.+..++.++
T Consensus       181 H~~~ivH~Dlkp~NIll~~~~---~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  257 (332)
T 3qd2_B          181 HSKGLMHRDLKPSNIFFTMDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKV  257 (332)
T ss_dssp             HHTTEECCCCCGGGEEECTTC---CEEECCCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHH
T ss_pred             HhCCeeecCCCcccEEEeCCC---CEEEeecCcccccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchh
Confidence            456999999999999999877   79999999998765432             23446799999999999999999999


Q ss_pred             chhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           69 DLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        69 DIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      |||||||++|+|++|..|+..  .......+..   ..++ ......++.+.+|+.+||..||.+|||++|+++||||+.
T Consensus       258 Di~slG~il~el~~~~~~~~~--~~~~~~~~~~---~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          258 DIFSLGLILFELLYSFSTQME--RVRIITDVRN---LKFP-LLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             HHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHT---TCCC-HHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             hHHHHHHHHHHHHHcCCChhH--HHHHHHHhhc---cCCC-cccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence            999999999999998776532  1222222222   1222 223456788899999999999999999999999999964

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.90  E-value=3.2e-24  Score=218.08  Aligned_cols=144  Identities=28%  Similarity=0.495  Sum_probs=119.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+||+++.++   .+||+|||+++...... ......|++.|+|||++.+..++.++|||||||++|+|
T Consensus       142 H~~~i~H~dl~p~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  218 (314)
T 3com_A          142 HFMRKIHRDIKAGNILLNTEG---HAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEM  218 (314)
T ss_dssp             HHTTEECCCCSGGGEEECTTC---CEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHH
T ss_pred             HhCCCcCCCcCHHHEEECCCC---CEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHH
Confidence            557999999999999998876   69999999998765432 33456799999999999998999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|..||.+.+.......+.......+.  .+..++..+.+|+.+||..||.+|||+.++++||||....
T Consensus       219 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~  286 (314)
T 3com_A          219 AEGKPPYADIHPMRAIFMIPTNPPPTFR--KPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK  286 (314)
T ss_dssp             HHSSCTTTTSCHHHHHHHHHHSCCCCCS--SGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred             HhCCCCCCCCChHHHHHHHhcCCCcccC--CcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence            9999999988776665555443322221  2345688999999999999999999999999999997653

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.90  E-value=6.4e-25  Score=226.01  Aligned_cols=146  Identities=27%  Similarity=0.491  Sum_probs=111.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccC-CCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+|||++.++   .+||+|||+++..... ......+||+.|+|||++.+. .++.++||||+||++|+
T Consensus       141 H~~~ivH~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~  217 (331)
T 4aaa_A          141 HSHNIIHRDIKPENILVSQSG---VVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTE  217 (331)
T ss_dssp             HHTTCCCCCCCGGGEEECTTS---CEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHH
T ss_pred             HHCCEEccCcChheEEEcCCC---cEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHH
Confidence            456999999999999998877   7999999999876432 334556899999999999775 78899999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCC------------------CCCC--------CcccccCHHHHHHHHHhhccCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTEL------------------RFPP--------GAIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~------------------~~p~--------~~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      |++|+.||.+....+.+..+......                  ..+.        .....+++.+.+|+.+||..||.+
T Consensus       218 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  297 (331)
T 4aaa_A          218 MFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDK  297 (331)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGG
T ss_pred             HHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCccc
Confidence            99999999998877666555421110                  0110        011246789999999999999999


Q ss_pred             CCCHHHHHhchhHHHhH
Q 008370          134 RITFKEFFNHRFLGELR  150 (568)
Q Consensus       134 RpTaeElL~Hpff~~~~  150 (568)
                      |||+.|+++||||+...
T Consensus       298 Rpt~~ell~hp~f~~~~  314 (331)
T 4aaa_A          298 RPFCAELLHHDFFQMDG  314 (331)
T ss_dssp             SCCGGGGGGSHHHHGGG
T ss_pred             CCCHHHHhcCchhccCC
Confidence            99999999999997653

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.90  E-value=2.2e-24  Score=224.38  Aligned_cols=141  Identities=24%  Similarity=0.428  Sum_probs=111.0

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCC
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK   84 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~   84 (568)
                      ||+||||||+|||++.++   .+||+|||+++.... ......+||+.|+|||++.+..++.++|||||||++|+|++|+
T Consensus       152 ~i~H~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  227 (360)
T 3eqc_A          152 KIMHRDVKPSNILVNSRG---EIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR  227 (360)
T ss_dssp             CCCCSCCSGGGEEECTTC---CEEECCCCCCHHHHH-HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTS
T ss_pred             CEEcCCccHHHEEECCCC---CEEEEECCCCccccc-ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCC
Confidence            899999999999999877   699999999875432 2234568999999999999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHH------------------------------------------HHHhccCCCCCCCcccccCHHHHHH
Q 008370           85 PPFDGSNQLQLFQ------------------------------------------NILTSTELRFPPGAIEELHPDCVDL  122 (568)
Q Consensus        85 ~PF~g~~~~~~~~------------------------------------------~Il~~~~~~~p~~~~~~ls~~~~dL  122 (568)
                      .||.+.+..+...                                          .+......   ......++.++.+|
T Consensus       228 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l  304 (360)
T 3eqc_A          228 YPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPP---KLPSGVFSLEFQDF  304 (360)
T ss_dssp             CCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCC---CCCTTTSCHHHHHH
T ss_pred             CCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCC---CCCcccccHHHHHH
Confidence            9998766443321                                          11111111   11123467899999


Q ss_pred             HHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370          123 CRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus       123 I~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      |.+||..||.+|||++|+++||||+...+.
T Consensus       305 i~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  334 (360)
T 3eqc_A          305 VNKCLIKNPAERADLKQLMVHAFIKRSDAE  334 (360)
T ss_dssp             HHHHHCSSTTTSCCHHHHHTSHHHHHHHHS
T ss_pred             HHHHhhcChhhCCCHHHHhhChHhhcchHh
Confidence            999999999999999999999999877643

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.90  E-value=8e-25  Score=221.83  Aligned_cols=147  Identities=27%  Similarity=0.493  Sum_probs=115.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC----CCCccccCCCcccChhhhcc-CCCCcccchhhHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ----DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAI   76 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~----~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGvi   76 (568)
                      |..||+||||||+|||++.++  ..+||+|||+++.....    .......||+.|+|||++.. ..++.++|||||||+
T Consensus       137 H~~~i~H~dlkp~Nil~~~~~--~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~i  214 (320)
T 2i6l_A          137 HSANVLHRDLKPANLFINTED--LVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCI  214 (320)
T ss_dssp             HHTTCBCCCCSGGGEEEETTT--TEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHH
T ss_pred             HhCCEecCCCCHHHEEEcCCC--CeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHH
Confidence            456999999999999998543  27999999999876432    22344568999999998865 678999999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCC---------------------CCC----CcccccCHHHHHHHHHhhccCC
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELR---------------------FPP----GAIEELHPDCVDLCRCLLRQNP  131 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~---------------------~p~----~~~~~ls~~~~dLI~~cL~~dP  131 (568)
                      +|+|++|+.||.+.+..+....+.......                     .+.    .....++..+.+||.+||..||
T Consensus       215 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  294 (320)
T 2i6l_A          215 FAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSP  294 (320)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSG
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCc
Confidence            999999999999988777766665432110                     000    0123568899999999999999


Q ss_pred             CCCCCHHHHHhchhHHHhH
Q 008370          132 VERITFKEFFNHRFLGELR  150 (568)
Q Consensus       132 ~~RpTaeElL~Hpff~~~~  150 (568)
                      .+|||++++++||||....
T Consensus       295 ~~Rpt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          295 MDRLTAEEALSHPYMSIYS  313 (320)
T ss_dssp             GGSCCHHHHHTSHHHHTTC
T ss_pred             cccCCHHHHhCCccccccc
Confidence            9999999999999997653

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.90  E-value=1.2e-24  Score=216.91  Aligned_cols=140  Identities=30%  Similarity=0.559  Sum_probs=108.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCC-CcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKY-DAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~y-s~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+||+++.++   .+||+|||+++...........+|++.|+|||++.+..+ +.++||||||+++|+|
T Consensus       128 H~~~i~H~dl~p~Nil~~~~~---~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l  204 (276)
T 2h6d_A          128 HRHMVVHRDLKPENVLLDAHM---NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYAL  204 (276)
T ss_dssp             HHHCSSCCCCCGGGEEECTTS---CEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHH
T ss_pred             HHCCCccCCCChhhEEECCCC---CEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHH
Confidence            445899999999999999876   699999999987766555556789999999999987765 5789999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++|..||.+.........+... ...+|    ..++..+.+++.+||..||.+|||++++++||||...
T Consensus       205 ~~g~~p~~~~~~~~~~~~~~~~-~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          205 LCGTLPFDDEHVPTLFKKIRGG-VFYIP----EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHC-CCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HhCCCCCCCCcHHHHHHHhhcC-cccCc----hhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence            9999999988877777666543 22333    3568899999999999999999999999999999653

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.90  E-value=2.1e-24  Score=220.66  Aligned_cols=143  Identities=25%  Similarity=0.420  Sum_probs=110.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhc-----cCCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~-----~~~ys~ksDIWSlGv   75 (568)
                      |..||+||||||+|||++.++   .+||+|||+++..... .......||+.|+|||++.     ...++.++|||||||
T Consensus       146 H~~~ivH~dlkp~NIl~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~  222 (326)
T 2x7f_A          146 HQHKVIHRDIKGQNVLLTENA---EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGI  222 (326)
T ss_dssp             HHTTCCCCCCSGGGEEECTTC---CEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHH
T ss_pred             HHCCccccCCcHHHEEEcCCC---CEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHH
Confidence            456999999999999998776   6999999999875432 2334567999999999986     567889999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|+|++|..||.+.+.......+.......   .....++..+.+||.+||..||.+||+++++++||||....
T Consensus       223 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  294 (326)
T 2x7f_A          223 TAIEMAEGAPPLCDMHPMRALFLIPRNPAPR---LKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP  294 (326)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC---CSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred             HHHHHHhCCCCCCCCcHHHHHHHhhcCcccc---CCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence            9999999999999888776666555443222   22346788999999999999999999999999999997653

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.90  E-value=2e-24  Score=223.18  Aligned_cols=139  Identities=30%  Similarity=0.602  Sum_probs=119.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+|||++.++   .+||+|||+++..... ......+||+.|+|||++.+..++.++|||||||++|+|
T Consensus       158 H~~~ivH~dlkp~NIl~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l  234 (335)
T 2owb_A          158 HRNRVIHRDLKLGNLFLNEDL---EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL  234 (335)
T ss_dssp             HHTTEECSCCCGGGEEECTTC---CEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHH
T ss_pred             HHCCCEecCCCchhEEEcCCC---CEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHH
Confidence            556999999999999999876   6999999999876532 234556899999999999998999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ++|+.||.+....+.+..+... ...++    ..+++.+.+||.+||..||.+||+++++++||||..
T Consensus       235 ~~g~~pf~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~  297 (335)
T 2owb_A          235 LVGKPPFETSCLKETYLRIKKN-EYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS  297 (335)
T ss_dssp             HHSSCTTCCSSHHHHHHHHHHT-CCCCC----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred             HHCcCCCCCCCHHHHHHHHhcC-CCCCC----ccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence            9999999988877776666543 33333    357889999999999999999999999999999964

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.90  E-value=2.6e-24  Score=216.62  Aligned_cols=140  Identities=26%  Similarity=0.487  Sum_probs=109.9

Q ss_pred             CCCC--eEecCCCCCCeEEe-cCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVF--MIVSANACQNLLVS-TNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~--IIHrDLKP~NILL~-~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+  |+||||||+|||++ .++   .+||+|||++..... ......+||+.|+|||++.+ .++.++||||+||++|
T Consensus       146 H~~~~~i~H~dikp~Nil~~~~~~---~~kl~Dfg~~~~~~~-~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~  220 (290)
T 1t4h_A          146 HTRTPPIIHRDLKCDNIFITGPTG---SVKIGDLGLATLKRA-SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCML  220 (290)
T ss_dssp             HTSSSCCCCSCCCGGGEEESSTTS---CEEECCTTGGGGCCT-TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHH
T ss_pred             HcCCCCEEECCCCHHHEEEECCCC---CEEEeeCCCcccccc-cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHH
Confidence            3445  99999999999997 444   699999999975443 33445679999999998864 5899999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      +|++|+.||.+..............  ..+.......++.+.+||.+||..||.+|||++++++||||++
T Consensus       221 ~l~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~  288 (290)
T 1t4h_A          221 EMATSEYPYSECQNAAQIYRRVTSG--VKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHHSSCTTTTCSSHHHHHHHHTTT--CCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHhCCCCCCCcCcHHHHHHHHhcc--CCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence            9999999998855444433333222  1222333456789999999999999999999999999999964

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.90  E-value=3.9e-24  Score=216.25  Aligned_cols=140  Identities=31%  Similarity=0.517  Sum_probs=116.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---CCCccccCCCcccChhhhccCC--CCcccchhhHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---DLADTLCGSPLYMAPEIIQNHK--YDAKADLWSVGAI   76 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---~~~~t~~GT~~YmAPEvl~~~~--ys~ksDIWSlGvi   76 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++.....   .......||+.|+|||++.+..  ++.++|||||||+
T Consensus       126 H~~~i~H~dlkp~NIl~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~i  202 (305)
T 2wtk_C          126 HSQGIVHKDIKPGNLLLTTGG---TLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVT  202 (305)
T ss_dssp             HHTTEECSCCSGGGEEECTTC---CEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHH
T ss_pred             HHCCeeecCCCcccEEEcCCC---cEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHH
Confidence            456999999999999998876   6999999999876432   2234567999999999997643  3778999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +|+|++|..||.+.+..+....+... ...++    ..+++.+.+|+.+||..||.+||+++++++||||...
T Consensus       203 l~~l~~g~~p~~~~~~~~~~~~i~~~-~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~  270 (305)
T 2wtk_C          203 LYNITTGLYPFEGDNIYKLFENIGKG-SYAIP----GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKK  270 (305)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHC-CCCCC----SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSC
T ss_pred             HHHHHhCCCCCCCchHHHHHHHHhcC-CCCCC----CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccC
Confidence            99999999999998887777766554 33333    3678899999999999999999999999999999654

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.90  E-value=2.6e-24  Score=216.97  Aligned_cols=139  Identities=30%  Similarity=0.602  Sum_probs=118.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+||+++.++   .+||+|||+++..... ......+||+.|+|||++.+..++.++||||+|+++|+|
T Consensus       132 H~~~i~H~dl~p~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l  208 (294)
T 2rku_A          132 HRNRVIHRDLKLGNLFLNEDL---EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL  208 (294)
T ss_dssp             HHTTEECCCCCGGGEEECTTC---CEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHH
T ss_pred             HHCCccccCCChHhEEEcCCC---CEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHH
Confidence            456999999999999999876   6999999999876532 234456799999999999988899999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ++|+.||.+....+.+..+... ...+|    ..+++.+.+++.+||..||.+||+++++++||||..
T Consensus       209 ~~g~~p~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~  271 (294)
T 2rku_A          209 LVGKPPFETSCLKETYLRIKKN-EYSIP----KHINPVAASLIQKMLQTDPTARPTINELLNDEFFTS  271 (294)
T ss_dssp             HHSSCTTCCSSHHHHHHHHHTT-CCCCC----TTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred             HhCCCCCCCCCHHHHHHHHhhc-cCCCc----cccCHHHHHHHHHHcccChhhCcCHHHHhhChheec
Confidence            9999999998877776666543 33333    367889999999999999999999999999999964

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.90  E-value=7.3e-25  Score=219.01  Aligned_cols=140  Identities=29%  Similarity=0.567  Sum_probs=90.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..+|+||||||+||+++.++   .+||+|||+++..... ......+||+.|+|||++.+..++.++||||+||++|+|
T Consensus       129 H~~~i~H~dl~p~Nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l  205 (278)
T 3cok_A          129 HSHGILHRDLTLSNLLLTRNM---NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTL  205 (278)
T ss_dssp             HHTTEECSSCCGGGEEECTTC---CEEECCCTTCEECC----------------------------CTHHHHHHHHHHHH
T ss_pred             HHCCeecCCCCHHHEEEcCCC---CEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHH
Confidence            456999999999999998876   6999999999876532 233456799999999999988899999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++|+.||........+..+... ...    .+..++.++.+|+.+||..||.+||+++++++||||...
T Consensus       206 ~~g~~p~~~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          206 LIGRPPFDTDTVKNTLNKVVLA-DYE----MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             HHSSCSSCCCSCC-----CCSS-CCC----CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred             HhCCCCCCChhHHHHHHHHhhc-ccC----CccccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence            9999999876654444433221 122    223578899999999999999999999999999999654

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.90  E-value=1.2e-24  Score=226.26  Aligned_cols=145  Identities=20%  Similarity=0.293  Sum_probs=108.1

Q ss_pred             CCC-CeEecCCCCCCeEEecCC---CCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYV-FMIVSANACQNLLVSTNE---VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~-~IIHrDLKP~NILL~~~~---~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |.. ||+||||||+|||++.++   ....+||+|||+++....  .....+||+.|+|||++.+..++.++|||||||++
T Consensus       148 H~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il  225 (373)
T 1q8y_A          148 HRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLI  225 (373)
T ss_dssp             HHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHH
T ss_pred             HhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCC--CCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHH
Confidence            444 999999999999996532   233799999999987643  23456899999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCc------HHHHHHHHHhccCCCCC--------------------------------------CCccc
Q 008370           78 FQLVTGKPPFDGSN------QLQLFQNILTSTELRFP--------------------------------------PGAIE  113 (568)
Q Consensus        78 ~ELltG~~PF~g~~------~~~~~~~Il~~~~~~~p--------------------------------------~~~~~  113 (568)
                      |+|++|+.||.+..      ..+.+..+..... ..|                                      .....
T Consensus       226 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (373)
T 1q8y_A          226 FELITGDFLFEPDEGHSYTKDDDHIAQIIELLG-ELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSK  304 (373)
T ss_dssp             HHHHHSSCCC---------CHHHHHHHHHHHHC-SCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCH
T ss_pred             HHHHhCCCCCCCCcccccCChHHHHHHHHHhcC-CCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCc
Confidence            99999999998654      2222222221100 000                                      01112


Q ss_pred             ccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370          114 ELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       114 ~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ..+..+.+||.+||..||.+|||++|+++||||...
T Consensus       305 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  340 (373)
T 1q8y_A          305 DEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  340 (373)
T ss_dssp             HHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             chHHHHHHHHHHHhccCccccCCHHHHhhChhhhcc
Confidence            446788999999999999999999999999999654

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.90  E-value=1.3e-24  Score=221.88  Aligned_cols=144  Identities=23%  Similarity=0.412  Sum_probs=112.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++.+....    .....+||+.|+|||++.+..++.++|||||||++
T Consensus       133 H~~~ivH~dlkp~Nil~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l  209 (311)
T 3ork_A          133 HQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVL  209 (311)
T ss_dssp             HHTTCCCCCCCGGGEEEETTS---CEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred             HHCCCCcCCCCHHHEEEcCCC---CEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHH
Confidence            456999999999999999877   69999999998764322    23346799999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |+|++|+.||.+.........+...... .+......+++++.+++.+||..||.+||++.+++.|+|+...
T Consensus       210 ~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~  280 (311)
T 3ork_A          210 YEVLTGEPPFTGDSPVSVAYQHVREDPI-PPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  280 (311)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHCCCC-CHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCChHHHHHHHhcCCCC-CcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence            9999999999998887776666554321 1222234578999999999999999999999999999999654

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.90  E-value=2.7e-24  Score=231.07  Aligned_cols=145  Identities=22%  Similarity=0.383  Sum_probs=107.6

Q ss_pred             CCCCeEecCCCCCCeEEecCC----------CCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhcc-----
Q 008370            2 CYVFMIVSANACQNLLVSTNE----------VTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQN-----   61 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~----------~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~-----   61 (568)
                      |..||+||||||+|||++.++          ....+||+|||+++......     .....+||+.|+|||++.+     
T Consensus       132 H~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  211 (434)
T 2rio_A          132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQ  211 (434)
T ss_dssp             HHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTS
T ss_pred             HHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccc
Confidence            456999999999999998642          33479999999999875432     1235689999999999965     


Q ss_pred             --CCCCcccchhhHHHHHHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCC---CCcccccCHHHHHHHHHhhccCCCCCC
Q 008370           62 --HKYDAKADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFP---PGAIEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        62 --~~ys~ksDIWSlGviL~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p---~~~~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                        ..++.++|||||||++|+|++ |..||.+.....  ..+.... ...+   ......+++++.+||.+||..||.+||
T Consensus       212 ~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  288 (434)
T 2rio_A          212 TKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGI-FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRP  288 (434)
T ss_dssp             CCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTC-CCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSC
T ss_pred             cccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCC-CCcccccccccccchHHHHHHHHHHhhCChhhCC
Confidence              578899999999999999999 999997665433  2233321 1111   111234567899999999999999999


Q ss_pred             CHHHHHhchhHHHh
Q 008370          136 TFKEFFNHRFLGEL  149 (568)
Q Consensus       136 TaeElL~Hpff~~~  149 (568)
                      |+.++++||||...
T Consensus       289 s~~eil~hp~f~~~  302 (434)
T 2rio_A          289 TAMKVLRHPLFWPK  302 (434)
T ss_dssp             CHHHHHTSGGGSCH
T ss_pred             CHHHHHhCCccCCc
Confidence            99999999999543

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.90  E-value=3.2e-24  Score=213.59  Aligned_cols=138  Identities=17%  Similarity=0.287  Sum_probs=107.0

Q ss_pred             CCCCeEecCCCCCCeEEecCC----------------CCCcEEEeecccceecCCCCCCccccCCCcccChhhhccC-CC
Q 008370            2 CYVFMIVSANACQNLLVSTNE----------------VTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KY   64 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~----------------~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~-~y   64 (568)
                      |..+|+||||||+|||++.++                ....+||+|||+++.....   ....||+.|+|||++.+. .+
T Consensus       132 H~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~---~~~~gt~~y~aPE~~~~~~~~  208 (289)
T 1x8b_A          132 HSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP---QVEEGDSRFLANEVLQENYTH  208 (289)
T ss_dssp             HHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS---CCCCCCGGGCCHHHHTTCCTT
T ss_pred             HhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc---cccCCCccccChhHhcCCCCC
Confidence            456999999999999998654                3347999999999876543   235699999999999765 56


Q ss_pred             CcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhch
Q 008370           65 DAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHR  144 (568)
Q Consensus        65 s~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hp  144 (568)
                      +.++|||||||++|+|++|.+++.....   ...+.......    .+..+++.+.+|+.+||..||.+|||+.++++||
T Consensus       209 ~~~~Di~slG~il~~l~~~~~~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~  281 (289)
T 1x8b_A          209 LPKADIFALALTVVCAAGAEPLPRNGDQ---WHEIRQGRLPR----IPQVLSQEFTELLKVMIHPDPERRPSAMALVKHS  281 (289)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCCSSSHH---HHHHHTTCCCC----CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCT
T ss_pred             CchhhHHHHHHHHHHHhcCCCCCcchhH---HHHHHcCCCCC----CCcccCHHHHHHHHHHhCCCcccCCCHHHHhhCh
Confidence            6789999999999999999988765543   33344333222    2346789999999999999999999999999999


Q ss_pred             hHHHh
Q 008370          145 FLGEL  149 (568)
Q Consensus       145 ff~~~  149 (568)
                      ||...
T Consensus       282 ~~~~~  286 (289)
T 1x8b_A          282 VLLSA  286 (289)
T ss_dssp             TC---
T ss_pred             Hhhhh
Confidence            99754

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.90  E-value=2.8e-24  Score=219.89  Aligned_cols=144  Identities=22%  Similarity=0.349  Sum_probs=111.6

Q ss_pred             CCCCeEecCCCCCCeEEecC-CCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc--------cCCCCcccchhh
Q 008370            2 CYVFMIVSANACQNLLVSTN-EVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ--------NHKYDAKADLWS   72 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~-~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~--------~~~ys~ksDIWS   72 (568)
                      |..||+||||||+|||+..+ .....+||+|||+++...........+||+.|+|||++.        +..++.++||||
T Consensus       129 H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Diws  208 (319)
T 4euu_A          129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWS  208 (319)
T ss_dssp             HHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHH
T ss_pred             HHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHH
Confidence            45699999999999998322 223379999999999887666666778999999999986        577899999999


Q ss_pred             HHHHHHHHHhCCCCCCCC----cHHHHHHHHHhccCC--------------------CCCCCcccccCHHHHHHHHHhhc
Q 008370           73 VGAILFQLVTGKPPFDGS----NQLQLFQNILTSTEL--------------------RFPPGAIEELHPDCVDLCRCLLR  128 (568)
Q Consensus        73 lGviL~ELltG~~PF~g~----~~~~~~~~Il~~~~~--------------------~~p~~~~~~ls~~~~dLI~~cL~  128 (568)
                      |||++|+|++|+.||...    ...+....+......                    +.+......++..+.+|+.+||+
T Consensus       209 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~  288 (319)
T 4euu_A          209 IGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILE  288 (319)
T ss_dssp             HHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhcc
Confidence            999999999999999743    234455555543221                    11112223456688999999999


Q ss_pred             cCCCCCCCHHHHHhchh
Q 008370          129 QNPVERITFKEFFNHRF  145 (568)
Q Consensus       129 ~dP~~RpTaeElL~Hpf  145 (568)
                      .||.+|||++|+++||-
T Consensus       289 ~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          289 ADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             CCTTTSCCHHHHHHHHH
T ss_pred             CChhhhccHHHhhhccH
Confidence            99999999999999974

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.90  E-value=1.3e-24  Score=218.85  Aligned_cols=147  Identities=24%  Similarity=0.448  Sum_probs=110.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC------CCCccccCCCcccChhhhcc-CCCCcccchhhHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ------DLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVG   74 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~------~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlG   74 (568)
                      |..||+||||||+||+++.++   .+||+|||+++.....      .......||+.|+|||++.+ ..++.++||||||
T Consensus       138 H~~~i~H~dl~p~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG  214 (303)
T 2vwi_A          138 HKNGQIHRDVKAGNILLGEDG---SVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFG  214 (303)
T ss_dssp             HHTTCCCCCCSGGGEEECTTC---CEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHH
T ss_pred             HhCCCCCCCCChhhEEEcCCC---CEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHH
Confidence            456999999999999998876   6999999999765432      12345679999999999865 5688999999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCC-----CCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFP-----PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p-----~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++|+|++|+.||.+..................+     ......+++.+.+|+.+||..||.+||++.++++||||...
T Consensus       215 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  294 (303)
T 2vwi_A          215 ITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA  294 (303)
T ss_dssp             HHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred             HHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcC
Confidence            9999999999999987766555444443222211     12234677899999999999999999999999999999876


Q ss_pred             HH
Q 008370          150 RQ  151 (568)
Q Consensus       150 ~~  151 (568)
                      ..
T Consensus       295 ~~  296 (303)
T 2vwi_A          295 KN  296 (303)
T ss_dssp             --
T ss_pred             CC
Confidence            53

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.90  E-value=3e-24  Score=213.66  Aligned_cols=142  Identities=24%  Similarity=0.465  Sum_probs=112.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---CCCccccCCCcccChhhhccCCC-CcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---DLADTLCGSPLYMAPEIIQNHKY-DAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---~~~~t~~GT~~YmAPEvl~~~~y-s~ksDIWSlGviL   77 (568)
                      |..||+||||||+||+++.++   .+||+|||+++.....   ......+|++.|+|||++.+..+ +.++|||||||++
T Consensus       122 H~~~i~H~dl~p~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il  198 (276)
T 2yex_A          122 HGIGITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL  198 (276)
T ss_dssp             HHTTEECSCCSGGGEEECTTC---CEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHH
T ss_pred             HhCCeeccCCChHHEEEccCC---CEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHH
Confidence            456999999999999999876   6999999999865322   23456789999999999987665 6789999999999


Q ss_pred             HHHHhCCCCCCCCcHH-HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           78 FQLVTGKPPFDGSNQL-QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~-~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |+|++|..||.+.... ..+..+... ....  ..+..+++.+.+|+.+||..||.+|||++++++||||...
T Consensus       199 ~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (276)
T 2yex_A          199 TAMLAGELPWDQPSDSCQEYSDWKEK-KTYL--NPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  268 (276)
T ss_dssp             HHHHHSSCCCSCSCTTSHHHHHHHTT-CTTS--TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             HHHHhCCCCCCCCchHHHHHHHhhhc-cccc--CchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccCh
Confidence            9999999999876543 223333322 1111  1234678999999999999999999999999999999643

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.90  E-value=3.8e-24  Score=224.68  Aligned_cols=144  Identities=19%  Similarity=0.310  Sum_probs=120.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC---CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~---~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++....+||+|||+++....   ........||+.|+|||++.+..++.++|||||||++|
T Consensus       198 H~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~  277 (367)
T 3l9p_A          198 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW  277 (367)
T ss_dssp             HHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HhCCeeCCCCChhhEEEecCCCCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHH
Confidence            456999999999999999766555799999999985432   22334567899999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +|++ |..||.+....+....+........+    ..++..+.+|+.+||..||.+||++.++++|.++..-
T Consensus       278 ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~  345 (367)
T 3l9p_A          278 EIFSLGYMPYPSKSNQEVLEFVTSGGRMDPP----KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  345 (367)
T ss_dssp             HHHTTSCCSSTTCCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhh
Confidence            9998 99999999888888777665443333    3678899999999999999999999999999776443

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.89  E-value=3.9e-24  Score=220.53  Aligned_cols=144  Identities=27%  Similarity=0.481  Sum_probs=117.2

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccC-CCCc-ccchhhHHHHHHHHH
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDA-KADLWSVGAILFQLV   81 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~-~ys~-ksDIWSlGviL~ELl   81 (568)
                      .||+||||||+|||++.++   .+||+|||+++..... ......|++.|+|||++.+. .++. ++|||||||++|+|+
T Consensus       171 ~~i~H~dl~p~Nil~~~~~---~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~  246 (348)
T 2pml_X          171 KNICHRDVKPSNILMDKNG---RVKLSDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMF  246 (348)
T ss_dssp             SCEECCCCCGGGEEECTTS---CEEECCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHH
T ss_pred             CCEeecCCChHhEEEcCCC---cEEEeccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHH
Confidence            7999999999999998877   6999999999876443 34456799999999999877 6666 899999999999999


Q ss_pred             hCCCCCCCCcH-HHHHHHHHhccCCCCCCC---------------cccccCHHHHHHHHHhhccCCCCCCCHHHHHhchh
Q 008370           82 TGKPPFDGSNQ-LQLFQNILTSTELRFPPG---------------AIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF  145 (568)
Q Consensus        82 tG~~PF~g~~~-~~~~~~Il~~~~~~~p~~---------------~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpf  145 (568)
                      +|..||.+... .+....+... ...+|..               ....+++.+.+|+.+||..||.+||+++|+++|||
T Consensus       247 ~g~~pf~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~  325 (348)
T 2pml_X          247 YNVVPFSLKISLVELFNNIRTK-NIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEW  325 (348)
T ss_dssp             HSSCSSCCSSCSHHHHHHHTSC-CCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGG
T ss_pred             hCCCCCCCCCcHHHHHHHHhcc-CcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCcc
Confidence            99999998776 5556555433 3333321               11457889999999999999999999999999999


Q ss_pred             HHHhHHh
Q 008370          146 LGELRQT  152 (568)
Q Consensus       146 f~~~~~~  152 (568)
                      |....+.
T Consensus       326 f~~~~~~  332 (348)
T 2pml_X          326 LADTNIE  332 (348)
T ss_dssp             GTTCCHH
T ss_pred             ccCCCHH
Confidence            9876543

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.89  E-value=3.7e-24  Score=230.45  Aligned_cols=148  Identities=20%  Similarity=0.310  Sum_probs=107.1

Q ss_pred             CCCCeEecCCCCCCeEEecCC--CCCcEEEeecccceecCCC----CCCccccCCCcccChhhhc---cCCCCcccchhh
Q 008370            2 CYVFMIVSANACQNLLVSTNE--VTPVLKIGDFGFARSLTPQ----DLADTLCGSPLYMAPEIIQ---NHKYDAKADLWS   72 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~--~~~vvKL~DFGlAr~l~~~----~~~~t~~GT~~YmAPEvl~---~~~ys~ksDIWS   72 (568)
                      |..+||||||||+|||++.++  ....+||+|||+++.....    ......+||+.|+|||++.   ...++.++||||
T Consensus       135 H~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwS  214 (432)
T 3p23_A          135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFS  214 (432)
T ss_dssp             HHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHH
T ss_pred             HHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHH
Confidence            556999999999999996433  2336889999999876533    2334578999999999997   456778999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370           73 VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus        73 lGviL~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      |||++|+|++ |..||.......... +......... ......+..+.+||.+||..||.+|||++++++||||..+.+
T Consensus       215 lG~il~ellt~g~~pf~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~~~  292 (432)
T 3p23_A          215 AGCVFYYVISEGSHPFGKSLQRQANI-LLGACSLDCL-HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSLEK  292 (432)
T ss_dssp             HHHHHHHHHTTSCBTTBSTTTHHHHH-HTTCCCCTTS-CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCHHH
T ss_pred             HHHHHHHHHcCCCCCcchhhHHHHHH-HhccCCcccc-CccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccChHH
Confidence            9999999999 999997655443322 2222111111 111234567899999999999999999999999999976654

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.89  E-value=5e-24  Score=214.44  Aligned_cols=143  Identities=12%  Similarity=0.152  Sum_probs=110.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCC--CCCcEEEeecccceecCCCC--------CCccccCCCcccChhhhccCCCCcccch
Q 008370            1 MCYVFMIVSANACQNLLVSTNE--VTPVLKIGDFGFARSLTPQD--------LADTLCGSPLYMAPEIIQNHKYDAKADL   70 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~--~~~vvKL~DFGlAr~l~~~~--------~~~t~~GT~~YmAPEvl~~~~ys~ksDI   70 (568)
                      ||..||+||||||+|||++.++  ....+||+|||+++......        .....+||+.|+|||++.+..++.++||
T Consensus       122 lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  201 (298)
T 1csn_A          122 IHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDL  201 (298)
T ss_dssp             HHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHH
T ss_pred             HHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHH
Confidence            3567999999999999998764  23359999999998765432        2345679999999999999999999999


Q ss_pred             hhHHHHHHHHHhCCCCCCCC---cHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           71 WSVGAILFQLVTGKPPFDGS---NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        71 WSlGviL~ELltG~~PF~g~---~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |||||++|+|++|+.||.+.   ...+.+..+.........+.....+++.+.+|+.+||..||.+||+++++++.
T Consensus       202 ~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~  277 (298)
T 1csn_A          202 EALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGL  277 (298)
T ss_dssp             HHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            99999999999999999874   34444444433221111112223678899999999999999999999998654

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.89  E-value=1.9e-24  Score=218.28  Aligned_cols=144  Identities=24%  Similarity=0.445  Sum_probs=114.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhh-----ccCCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEII-----QNHKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl-----~~~~ys~ksDIWSlGv   75 (568)
                      |..||+||||||+|||++.++   .+||+|||++..... ........||+.|+|||++     ....++.++|||||||
T Consensus       134 H~~~i~H~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~  210 (302)
T 2j7t_A          134 HSKRIIHRDLKAGNVLMTLEG---DIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGI  210 (302)
T ss_dssp             HHTTCCCCCCSGGGEEECTTS---CEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHH
T ss_pred             hcCCcccCCCCHHHEEECCCC---CEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHH
Confidence            456999999999999998776   699999999754321 1123346799999999998     3667889999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|+|++|..||.+.+.......+........  .....++..+.+|+.+||..||.+|||+.++++||||....
T Consensus       211 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          211 TLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL--LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             HHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC--SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             HHHHHhcCCCCCccCCHHHHHHHHhccCCccc--CCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence            99999999999999887777666655432221  12346788999999999999999999999999999997654

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.89  E-value=4.5e-24  Score=214.47  Aligned_cols=143  Identities=27%  Similarity=0.451  Sum_probs=109.7

Q ss_pred             CCCCeEecCCCCCCeEEec-CCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccC--CCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVST-NEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNH--KYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~-~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~--~ys~ksDIWSlGviL   77 (568)
                      |..||+||||||+||+++. ++   .+||+|||+++...... ......|++.|+|||++.+.  .++.++|||||||++
T Consensus       139 H~~~i~H~dl~p~Nil~~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il  215 (295)
T 2clq_A          139 HDNQIVHRDIKGDNVLINTYSG---VLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTI  215 (295)
T ss_dssp             HHTTEECCCCSGGGEEEETTTC---CEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHH
T ss_pred             HhCCEEccCCChhhEEEECCCC---CEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHH
Confidence            4569999999999999987 44   79999999998765422 34456799999999998764  378899999999999


Q ss_pred             HHHHhCCCCCCCCcHHHH-HHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           78 FQLVTGKPPFDGSNQLQL-FQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~-~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      |+|++|+.||........ .......   ...+..+..+++.+.+|+.+||..||.+||+++++++||||....
T Consensus       216 ~~l~~g~~pf~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  286 (295)
T 2clq_A          216 IEMATGKPPFYELGEPQAAMFKVGMF---KVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSS  286 (295)
T ss_dssp             HHHHHTSCTTGGGSSHHHHHHHHHHH---CCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC--
T ss_pred             HHHHHCCCCccCCCchhHHHHhhccc---cccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhcc
Confidence            999999999976433221 2111111   112233346789999999999999999999999999999996543

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.89  E-value=8.2e-24  Score=222.57  Aligned_cols=135  Identities=27%  Similarity=0.455  Sum_probs=113.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......   ......||+.|+|||++.+..|+.++|||||||++|
T Consensus       220 H~~~ivHrDlkp~NIll~~~~---~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~  296 (370)
T 2psq_A          220 ASQKCIHRDLAARNVLVTENN---VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW  296 (370)
T ss_dssp             HHTTEECSCCCGGGEEECTTC---CEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHH
T ss_pred             HhCCeeccccchhhEEECCCC---CEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHH
Confidence            456999999999999998877   79999999998765432   223456788999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ||++ |..||.+....+.+..+........|    ..++..+.+||.+||..||.+||++.|++++
T Consensus       297 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          297 EIFTLGGSPYPGIPVEELFKLLKEGHRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             HHHTTSCCSSTTCCGGGHHHHHHTTCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999 99999998877777666554333333    4678899999999999999999999999765

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.89  E-value=4.8e-24  Score=217.92  Aligned_cols=141  Identities=18%  Similarity=0.379  Sum_probs=105.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC---ccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA---DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~---~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++   .+||+|||+++........   ....+++.|+|||++.+..++.++|||||||++|
T Consensus       154 H~~~ivH~Dikp~NIli~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  230 (323)
T 3qup_A          154 SSRNFIHRDLAARNCMLAEDM---TVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMW  230 (323)
T ss_dssp             HHTTCCCSCCSGGGEEECTTS---CEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HcCCcccCCCCcceEEEcCCC---CEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHH
Confidence            456999999999999999876   6999999999876543322   2345677899999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-------HHHHHhchhHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-------FKEFFNHRFLGEL  149 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-------aeElL~Hpff~~~  149 (568)
                      +|++ |..||.+....+....+........+    ..+++.+.+|+.+||..||.+|||       +++++.|+|+...
T Consensus       231 ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~  305 (323)
T 3qup_A          231 EIMTRGQTPYAGIENAEIYNYLIGGNRLKQP----PECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST  305 (323)
T ss_dssp             HHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred             HHHhCCCCCccccChHHHHHHHhcCCCCCCC----CccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence            9999 99999998887777777665444333    367889999999999999999999       5567778887543

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.89  E-value=6.6e-24  Score=213.08  Aligned_cols=141  Identities=23%  Similarity=0.472  Sum_probs=106.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---------------CCCccccCCCcccChhhhccC-CCC
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---------------DLADTLCGSPLYMAPEIIQNH-KYD   65 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---------------~~~~t~~GT~~YmAPEvl~~~-~ys   65 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.....               ......+||+.|+|||++.+. .++
T Consensus       133 H~~~i~H~dlkp~Nil~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  209 (303)
T 1zy4_A          133 HSQGIIHRDLKPMNIFIDESR---NVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYN  209 (303)
T ss_dssp             HHTTCCCSCCCGGGEEECTTS---CEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCC
T ss_pred             HhCCeecccCCHHhEEEcCCC---CEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCc
Confidence            456999999999999998876   6999999999865421               123456799999999999764 689


Q ss_pred             cccchhhHHHHHHHHHhCCCCCCCC-cHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhch
Q 008370           66 AKADLWSVGAILFQLVTGKPPFDGS-NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHR  144 (568)
Q Consensus        66 ~ksDIWSlGviL~ELltG~~PF~g~-~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hp  144 (568)
                      .++|||||||++|+|++   ||... ........+. .....+|+......++.+.+++.+||..||.+|||++++++||
T Consensus       210 ~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~  285 (303)
T 1zy4_A          210 EKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLR-SVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSG  285 (303)
T ss_dssp             THHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHH-STTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSS
T ss_pred             chhhHHHHHHHHHHHHh---ccCCchhHHHHHHhcc-ccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCC
Confidence            99999999999999998   56533 3333343333 3345566666667788899999999999999999999999999


Q ss_pred             hHHHh
Q 008370          145 FLGEL  149 (568)
Q Consensus       145 ff~~~  149 (568)
                      ||...
T Consensus       286 ~~~~~  290 (303)
T 1zy4_A          286 WLPVK  290 (303)
T ss_dssp             CSCCC
T ss_pred             CcCCC
Confidence            99643

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.89  E-value=2.6e-24  Score=214.78  Aligned_cols=136  Identities=27%  Similarity=0.519  Sum_probs=113.2

Q ss_pred             eEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhCC
Q 008370            6 MIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGK   84 (568)
Q Consensus         6 IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG~   84 (568)
                      |+||||||+|||++.++   .+||+|||+++...... ......|++.|+|||++.+..++.++|||||||++|+|++|.
T Consensus       137 ivH~dl~p~NIl~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~  213 (279)
T 2w5a_A          137 VLHRDLKPANVFLDGKQ---NVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM  213 (279)
T ss_dssp             -CCCCCSGGGEEECSSS---CEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSS
T ss_pred             eEEeccchhhEEEcCCC---CEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCC
Confidence            99999999999998776   69999999998765332 223457899999999999889999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           85 PPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        85 ~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      .||.+.+..+....+.......++    ..++..+.+++.+||..||.+||+++++++|+|+.+
T Consensus       214 ~p~~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          214 PPFTAFSQKELAGKIREGKFRRIP----YRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             CSSCCSSHHHHHHHHHHTCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             CCCcccCHHHHHHHHhhcccccCC----cccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence            999998887777777655433333    367889999999999999999999999999999854

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.89  E-value=8.5e-24  Score=217.32  Aligned_cols=135  Identities=27%  Similarity=0.337  Sum_probs=110.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......   ......|++.|+|||++.+..++.++|||||||++|
T Consensus       132 H~~~ivH~Dikp~Nil~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  208 (325)
T 3kex_A          132 EEHGMVHRNLAARNVLLKSPS---QVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVW  208 (325)
T ss_dssp             HHTTCCCSCCSSTTEEESSSS---CEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HhCCCCCCccchheEEECCCC---eEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHH
Confidence            456999999999999998876   69999999998765432   234456888999999999889999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+....+....+........+.    .+++++.+++.+||..||.+||++.++++|
T Consensus       209 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          209 ELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQ----ICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             HHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCT----TBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             HHHhCCCCCccccCHHHHHHHHHcCCCCCCCC----cCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999 999999887777766665544433333    467788999999999999999999999877

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.89  E-value=4.5e-24  Score=214.57  Aligned_cols=140  Identities=16%  Similarity=0.178  Sum_probs=106.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--------CccccCCCcccChhhhccCCCCcccchhhH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--------ADTLCGSPLYMAPEIIQNHKYDAKADLWSV   73 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--------~~t~~GT~~YmAPEvl~~~~ys~ksDIWSl   73 (568)
                      |..+|+||||||+|||++.++....+||+|||+++.......        .....||+.|+|||++.+..++.++|||||
T Consensus       122 H~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl  201 (296)
T 3uzp_A          122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESL  201 (296)
T ss_dssp             HHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred             HhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHH
Confidence            556999999999999996322233799999999987654322        345689999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCc---HHHHHHHHHhccCCCCC-CCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           74 GAILFQLVTGKPPFDGSN---QLQLFQNILTSTELRFP-PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        74 GviL~ELltG~~PF~g~~---~~~~~~~Il~~~~~~~p-~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ||++|+|++|+.||.+..   ..+.+..+..... ..+ +.....+++.+.+|+.+||..||.+||+++++++
T Consensus       202 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          202 GYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM-STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH-HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc-CCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence            999999999999998643   2222333322211 111 1112356889999999999999999999999865

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.89  E-value=1.7e-23  Score=213.21  Aligned_cols=141  Identities=28%  Similarity=0.513  Sum_probs=105.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhcc-----------CCCCcc
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQN-----------HKYDAK   67 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~-----------~~ys~k   67 (568)
                      |..+|+||||||+|||++. +   .+||+|||+++......   .....+||+.|+|||++.+           ..++.+
T Consensus       144 H~~~ivH~dlkp~NIl~~~-~---~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~  219 (313)
T 3cek_A          144 HQHGIVHSDLKPANFLIVD-G---MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPK  219 (313)
T ss_dssp             HHTTCCCCCCCGGGEEEET-T---EEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHH
T ss_pred             HHCCceecCCCcccEEEEC-C---eEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCch
Confidence            4569999999999999964 3   69999999998764332   2235679999999999865           468889


Q ss_pred             cchhhHHHHHHHHHhCCCCCCCCc-HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           68 ADLWSVGAILFQLVTGKPPFDGSN-QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        68 sDIWSlGviL~ELltG~~PF~g~~-~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      +|||||||++|+|++|+.||.... ....+..+.....   ....+...+..+.+|+.+||..||.+||++.++++||||
T Consensus       220 ~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~  296 (313)
T 3cek_A          220 SDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH---EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV  296 (313)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS---CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHH
T ss_pred             HHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhccc---ccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccc
Confidence            999999999999999999998754 3333333433221   111223457889999999999999999999999999999


Q ss_pred             HHh
Q 008370          147 GEL  149 (568)
Q Consensus       147 ~~~  149 (568)
                      ...
T Consensus       297 ~~~  299 (313)
T 3cek_A          297 QIQ  299 (313)
T ss_dssp             HCC
T ss_pred             cCC
Confidence            654

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.88  E-value=7.6e-24  Score=217.47  Aligned_cols=134  Identities=28%  Similarity=0.538  Sum_probs=109.2

Q ss_pred             CCCCeEecCCCCCCeEEe-cCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCC-CcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVS-TNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKY-DAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~-~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~y-s~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+|||++ .++   .+||+|||+++..... ......||+.|+|||++.+..+ +.++|||||||++|+
T Consensus       166 H~~~ivH~Dlkp~NIll~~~~~---~~kL~Dfg~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~e  241 (320)
T 3a99_A          166 HNCGVLHRDIKDENILIDLNRG---ELKLIDFGSGALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD  241 (320)
T ss_dssp             HHTTEECCCCSGGGEEEETTTT---EEEECCCTTCEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred             HHCCcEeCCCCHHHEEEeCCCC---CEEEeeCccccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHH
Confidence            456999999999999998 444   7999999999876543 3445679999999999987666 677899999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      |++|+.||.....      +... ...++    ..+++.+.+||.+||..||.+||+++++++||||....
T Consensus       242 l~~g~~pf~~~~~------~~~~-~~~~~----~~~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  301 (320)
T 3a99_A          242 MVCGDIPFEHDEE------IIRG-QVFFR----QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  301 (320)
T ss_dssp             HHHSSCSCCSHHH------HHHC-CCCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             HHHCCCCCCChhh------hhcc-ccccc----ccCCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence            9999999976431      2222 22222    36788999999999999999999999999999997653

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.88  E-value=9.1e-24  Score=217.52  Aligned_cols=135  Identities=25%  Similarity=0.329  Sum_probs=111.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++.......   .....||+.|+|||++.+..++.++|||||||++|
T Consensus       134 H~~~ivH~Dikp~NIll~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~  210 (327)
T 3poz_A          134 EDRRLVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW  210 (327)
T ss_dssp             HHTTCCCSCCCGGGEEEEETT---EEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             hhCCeeCCCCChheEEECCCC---CEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHH
Confidence            456999999999999999877   799999999987654332   22345688999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |+.||.+....+....+........+    ...+..+.+++.+||..||.+||++.+++++
T Consensus       211 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          211 ELMTFGSKPYDGIPASEISSILEKGERLPQP----PICTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC----TTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHhcCCCCccCCCHHHHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            9999 99999988776666555544333333    3578899999999999999999999999876

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.88  E-value=7.7e-24  Score=214.85  Aligned_cols=142  Identities=19%  Similarity=0.380  Sum_probs=108.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......  .....+||+.|+|||++.+..++.++||||+||++|+
T Consensus       128 H~~~i~H~Dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~  204 (294)
T 4eqm_A          128 HDMRIVHRDIKPQNILIDSNK---TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYE  204 (294)
T ss_dssp             HHTTCCCCCCCGGGEEECTTS---CEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHH
T ss_pred             HHCCcccCCCCHHHEEECCCC---CEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHH
Confidence            556999999999999998877   69999999998765332  2345679999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      |++|+.||.+.+......+.........+......+++.+.+++.+||..||.+||+..+.+.+.|.
T Consensus       205 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~  271 (294)
T 4eqm_A          205 MLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLS  271 (294)
T ss_dssp             HHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHH
T ss_pred             HHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHH
Confidence            9999999999887776665555433332223345678999999999999999999955555555543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.88  E-value=1.1e-23  Score=211.32  Aligned_cols=135  Identities=25%  Similarity=0.436  Sum_probs=103.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.......  .....+++.|+|||++.+..++.++|||||||++|+
T Consensus       133 H~~~i~H~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e  209 (281)
T 1mp8_A          133 ESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE  209 (281)
T ss_dssp             HHTTCCCSCCSGGGEEEEETT---EEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred             HhCCeecccccHHHEEECCCC---CEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHH
Confidence            556999999999999999876   799999999987654332  233456788999999998899999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++ |..||.+....+....+........+    ..+++.+.+++.+||..||.+||++.+++++
T Consensus       210 ll~~g~~pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          210 ILMHGVKPFQGVKNNDVIGRIENGERLPMP----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHTTSCCTTTTCCGGGHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCCCCCcCCHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            997 99999988877777777655433333    3678999999999999999999999999765

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.88  E-value=3e-23  Score=212.62  Aligned_cols=134  Identities=24%  Similarity=0.411  Sum_probs=102.7

Q ss_pred             CCCC--eEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVF--MIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~--IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..|  |+||||||+|||++.++   .+||+|||+++...... .....+||+.|+|||++.+..++.++|||||||++|
T Consensus       154 H~~~~~ivH~Dikp~NIll~~~~---~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  230 (309)
T 3p86_A          154 HNRNPPIVHRNLKSPNLLVDKKY---TVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILW  230 (309)
T ss_dssp             HTSSSCCCCTTCCGGGEEECTTC---CEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHH
T ss_pred             HcCCCCEECCCCChhhEEEeCCC---cEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHH
Confidence            4456  99999999999998876   69999999998654332 234568999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|++|+.||.+.+..+....+.... ...    .+..+++.+.+||.+||..||.+|||+.++++
T Consensus       231 elltg~~Pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  291 (309)
T 3p86_A          231 ELATLQQPWGNLNPAQVVAAVGFKCKRLE----IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD  291 (309)
T ss_dssp             HHHHCCCTTTTSCHHHHHHHHHHSCCCCC----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHhcCCCCC----CCccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            9999999999988877766554332 222    23467899999999999999999999999975

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.88  E-value=2.5e-23  Score=210.83  Aligned_cols=135  Identities=25%  Similarity=0.418  Sum_probs=112.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++......   ......|++.|+|||++.+..++.++|||||||++|
T Consensus       167 H~~~ivH~dikp~NIli~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  243 (314)
T 2ivs_A          167 AEMKLVHRDLAARNILVAEGR---KMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLW  243 (314)
T ss_dssp             HHTTEECCCCSGGGEEEETTT---EEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred             HHCCCcccccchheEEEcCCC---CEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHH
Confidence            556999999999999999876   79999999998765432   223446788899999999989999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+.........+........    +..+++.+.+++.+||..||.+||++.+++++
T Consensus       244 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          244 EIVTLGGNPYPGIPPERLFNLLKTGHRMER----PDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             HHHTTSCCSSTTCCGGGHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhCCCCCCCCCCHHHHHHHhhcCCcCCC----CccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            9999 9999998887776666654433332    34678999999999999999999999999776

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.88  E-value=1.1e-23  Score=211.42  Aligned_cols=141  Identities=15%  Similarity=0.138  Sum_probs=105.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--------CCccccCCCcccChhhhccCCCCcccchhhH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--------LADTLCGSPLYMAPEIIQNHKYDAKADLWSV   73 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--------~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSl   73 (568)
                      |..+|+||||||+|||++.+...+.+||+|||+++......        ......||+.|+|||++.+..++.++|||||
T Consensus       122 H~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl  201 (296)
T 4hgt_A          122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESL  201 (296)
T ss_dssp             HHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHH
T ss_pred             HHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHH
Confidence            55699999999999999422223379999999998765432        2235689999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCcHH---HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           74 GAILFQLVTGKPPFDGSNQL---QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        74 GviL~ELltG~~PF~g~~~~---~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ||++|+|++|+.||.+....   ..+..+.........+.....+++.+.+|+.+||..||.+||+++++++
T Consensus       202 G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          202 GYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            99999999999999864321   2222222211111111112356889999999999999999999999965

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.88  E-value=2.1e-23  Score=212.80  Aligned_cols=135  Identities=24%  Similarity=0.413  Sum_probs=113.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......   ......||+.|+|||++.+..++.++|||||||++|
T Consensus       155 H~~~i~H~dikp~NIli~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  231 (322)
T 1p4o_A          155 NANKFVHRDLAARNCMVAEDF---TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW  231 (322)
T ss_dssp             HHTTCBCSCCSGGGEEECTTC---CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHCCCccCCCccceEEEcCCC---eEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHH
Confidence            456999999999999999876   69999999998654332   223446788999999999889999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+.+..+....+........+    ..++..+.+|+.+||..||.+||++.++++|
T Consensus       232 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          232 EIATLAEQPYQGLSNEQVLRFVMEGGLLDKP----DNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             HHHHTSCCTTTTSCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhcCCCccccCCHHHHHHHHHcCCcCCCC----CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            9999 89999998887777777655433332    3678899999999999999999999999876

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.88  E-value=1.6e-23  Score=215.49  Aligned_cols=140  Identities=19%  Similarity=0.278  Sum_probs=107.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCC--CCcEEEeecccceecCCCCC--------CccccCCCcccChhhhccCCCCcccchh
Q 008370            2 CYVFMIVSANACQNLLVSTNEV--TPVLKIGDFGFARSLTPQDL--------ADTLCGSPLYMAPEIIQNHKYDAKADLW   71 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~--~~vvKL~DFGlAr~l~~~~~--------~~t~~GT~~YmAPEvl~~~~ys~ksDIW   71 (568)
                      |..||+||||||+|||++.++.  ...+||+|||+++.......        ....+||+.|+|||++.+..++.++|||
T Consensus       122 H~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  201 (330)
T 2izr_A          122 HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLE  201 (330)
T ss_dssp             HHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHH
T ss_pred             HhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHH
Confidence            5569999999999999987752  12399999999987643321        2467899999999999999999999999


Q ss_pred             hHHHHHHHHHhCCCCCCCC---cHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           72 SVGAILFQLVTGKPPFDGS---NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        72 SlGviL~ELltG~~PF~g~---~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ||||++|+|++|+.||.+.   ...+.+..+.... ...+........+.+.+++.+||..||.+||+++++.+
T Consensus       202 slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          202 ALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTK-RATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHH-HHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHHhcCCCCccccccccHHHHHHHHHhhh-ccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            9999999999999999874   3344444443321 11121111122349999999999999999999999865

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.88  E-value=2.1e-23  Score=207.70  Aligned_cols=135  Identities=23%  Similarity=0.441  Sum_probs=113.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+||+++.++   .+||+|||+++......  ......|++.|+|||++.+..++.++||||+||++|+
T Consensus       123 H~~~i~H~dikp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~  199 (269)
T 4hcu_A          123 EEACVIHRDLAARNCLVGENQ---VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE  199 (269)
T ss_dssp             HHTTCCCSCCCGGGEEECGGG---CEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HhCCeecCCcchheEEEcCCC---CEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHH
Confidence            557999999999999998776   69999999998664332  2234556788999999998899999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++ |..||.+....+....+........+    ...++.+.+++.+||..||.+||++.++++|
T Consensus       200 ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          200 VFSEGKIPYENRSNSEVVEDISTGFRLYKP----RLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHHHTTCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCCCCCCCCCHHHHHHHHhcCccCCCC----CcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            999 99999999888887777655333322    3568899999999999999999999999876

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.88  E-value=3.5e-23  Score=218.05  Aligned_cols=135  Identities=27%  Similarity=0.453  Sum_probs=114.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++......   ......||+.|+|||++.+..++.++|||||||++|
T Consensus       208 H~~~ivH~Dlkp~NIll~~~~---~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~  284 (382)
T 3tt0_A          208 ASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW  284 (382)
T ss_dssp             HHTTCCCSCCCGGGEEECTTC---CEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHH
T ss_pred             HhCCEecCCCCcceEEEcCCC---cEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHH
Confidence            456999999999999999876   69999999998765432   233456788999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+....+....+........+    ..+++++.+|+.+||..||.+||++.+++++
T Consensus       285 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          285 EIFTLGGSPYPGVPVEELFKLLKEGHRMDKP----SNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             HHHTTSCCSSTTCCHHHHHHHHHTTCCCCCC----SSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999 99999998888877766655443333    4678999999999999999999999999876

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.88  E-value=3.9e-23  Score=205.31  Aligned_cols=135  Identities=21%  Similarity=0.365  Sum_probs=112.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+||+++.++   .+||+|||+++.......  .....||+.|+|||++.+..++.++||||+|+++|+
T Consensus       121 H~~~i~H~dikp~Nil~~~~~---~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  197 (268)
T 3sxs_A          121 ESHQFIHRDLAARNCLVDRDL---CVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWE  197 (268)
T ss_dssp             HHTTEEESSCSGGGEEECTTC---CEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHH
T ss_pred             HHCCeecCCcCcceEEECCCC---CEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHH
Confidence            456999999999999998877   699999999987654432  223456778999999998889999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++ |..||.+....+....+........+    ...++.+.+++.+||..||.+|||+.++++|
T Consensus       198 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          198 VFSLGKMPYDLYTNSEVVLKVSQGHRLYRP----HLASDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             HHTTTCCTTTTSCHHHHHHHHHTTCCCCCC----TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCCCccccChHHHHHHHHcCCCCCCC----CcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999 99999998888777766655433322    3567899999999999999999999999876

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.88  E-value=1.6e-23  Score=216.96  Aligned_cols=135  Identities=28%  Similarity=0.461  Sum_probs=109.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......   ......||+.|+|||++.+..++.++|||||||++|
T Consensus       210 H~~~ivH~Dikp~NIll~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~  286 (359)
T 3vhe_A          210 ASRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW  286 (359)
T ss_dssp             HHTTCCCSCCSGGGEEECGGG---CEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHCCcccCCCChhhEEEcCCC---cEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHH
Confidence            456999999999999998776   69999999998764332   233467889999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHH-HHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQN-ILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~-Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+....+.+.. +........+    ..+++.+.+++.+||..||.+|||+.++++|
T Consensus       287 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          287 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             HHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhcCCCCCCccchhHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            9998 9999988764444433 3333233322    3578899999999999999999999999887

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.88  E-value=2.4e-23  Score=214.81  Aligned_cols=135  Identities=26%  Similarity=0.345  Sum_probs=105.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.......   .....||+.|+|||++.+..|+.++|||||||++|
T Consensus       134 H~~~ivH~Dikp~NIl~~~~~---~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~  210 (327)
T 3lzb_A          134 EDRRLVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVW  210 (327)
T ss_dssp             HHTTCCCSCCCGGGEEEEETT---EEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             hhCCCcCCCCCHHHEEEcCCC---CEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHH
Confidence            557999999999999999877   799999999987643322   22345678899999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+....+....+........+    ..++.++.+|+.+||..||.+||++.|+++.
T Consensus       211 ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  272 (327)
T 3lzb_A          211 ELMTFGSKPYDGIPASEISSILEKGERLPQP----PICTIDVYMIMRKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHCCCCCCCCCCHHHHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            9999 99999988877766656544333333    3578899999999999999999999999764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.88  E-value=3.7e-23  Score=213.22  Aligned_cols=135  Identities=20%  Similarity=0.310  Sum_probs=110.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC----CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL----ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~----~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++.......    .....+|+.|+|||++.+..++.++|||||||++
T Consensus       168 H~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il  244 (325)
T 3kul_A          168 SDLGYVHRDLAARNVLVDSNL---VCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVM  244 (325)
T ss_dssp             HHTTEECSCCSGGGEEECTTC---CEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHH
T ss_pred             HHCCeeCCCCCcceEEECCCC---CEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHH
Confidence            456999999999999998876   799999999987654321    2233467789999999989999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+|++ |..||.+....+....+........+    ..+++.+.+|+.+||..||.+||++.++++.
T Consensus       245 ~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~eil~~  307 (325)
T 3kul_A          245 WEVLAYGERPYWNMTNRDVISSVEEGYRLPAP----MGCPHALHQLMLDCWHKDRAQRPRFSQIVSV  307 (325)
T ss_dssp             HHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCCCcccCCHHHHHHHHHcCCCCCCC----CCcCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99999 99999999888888777665433333    3678899999999999999999999999653

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.88  E-value=2.5e-23  Score=213.54  Aligned_cols=135  Identities=27%  Similarity=0.390  Sum_probs=111.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++.++   .+||+|||+++............+++.|+|||++.+..++.++|||||||++|+|+
T Consensus       159 H~~~ivH~dlkp~NIl~~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell  235 (327)
T 1fvr_A          159 SQKQFIHRDLAARNILVGENY---VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV  235 (327)
T ss_dssp             HHTTEECSCCSGGGEEECGGG---CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred             HhCCccCCCCccceEEEcCCC---eEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHH
Confidence            456999999999999998876   69999999998544333334456788999999999888999999999999999999


Q ss_pred             h-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           82 T-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        82 t-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      + |..||.+.+..+....+........    +..+++.+.+|+.+||..||.+||++++++++
T Consensus       236 t~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          236 SLGGTPYCGMTCAELYEKLPQGYRLEK----PLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             TTSCCTTTTCCHHHHHHHGGGTCCCCC----CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCCCCCcHHHHHHHhhcCCCCCC----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            8 9999999888777766654433322    24678999999999999999999999999876

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.88  E-value=5.1e-23  Score=207.10  Aligned_cols=136  Identities=21%  Similarity=0.315  Sum_probs=114.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC----CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL----ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~----~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..+|+||||||+||+++.++   .+||+|||+++.......    .....||+.|+|||++.+..++.++|||||||++
T Consensus       127 H~~~i~H~dlkp~Nili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  203 (287)
T 1u59_A          127 EEKNFVHRDLAARNVLLVNRH---YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM  203 (287)
T ss_dssp             HHTTEECCCCSGGGEEEEETT---EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred             HHCCEeeCCCchheEEEcCCC---CEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHH
Confidence            456999999999999999876   799999999987654321    2334568899999999888899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhch
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHR  144 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hp  144 (568)
                      |+|++ |+.||.+....+....+.......++    ..+++.+.++|.+||..||.+||++.++++|.
T Consensus       204 ~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          204 WEALSYGQKPYKKMKGPEVMAFIEQGKRMECP----PECPPELYALMSDCWIYKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             HHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHcCCCCCcccCCHHHHHHHHhcCCcCCCC----CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            99998 99999988877777766655433333    36789999999999999999999999998873

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.88  E-value=1.2e-23  Score=219.71  Aligned_cols=137  Identities=13%  Similarity=0.176  Sum_probs=103.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--------CccccCCCcccChhhhccCCCCcccchhhH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--------ADTLCGSPLYMAPEIIQNHKYDAKADLWSV   73 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--------~~t~~GT~~YmAPEvl~~~~ys~ksDIWSl   73 (568)
                      |..||+||||||+|||++.+. .+.+||+|||+++.+.....        ....+||+.|+|||++.+..++.++|||||
T Consensus       169 H~~~iiHrDlkp~Nill~~~~-~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl  247 (364)
T 3op5_A          169 HEHEYVHGDIKASNLLLNYKN-PDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEIL  247 (364)
T ss_dssp             HHTTEECCCCCGGGEEEESSC-TTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred             HHCCeEEecCCHHHEEEecCC-CCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHH
Confidence            556999999999999998322 23799999999987653221        234569999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCcHHHHHHHHHh-c---c-----CCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           74 GAILFQLVTGKPPFDGSNQLQLFQNILT-S---T-----ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        74 GviL~ELltG~~PF~g~~~~~~~~~Il~-~---~-----~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ||++|+|++|+.||.+............ .   .     ...++   ...++..+.+++..||..+|.+||+++++++
T Consensus       248 G~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          248 GYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFP---AANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSC---TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcc---cccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            9999999999999986432211111111 0   0     00111   1356889999999999999999999999865

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.88  E-value=2.2e-23  Score=214.28  Aligned_cols=135  Identities=24%  Similarity=0.410  Sum_probs=112.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++......   ......||+.|+|||++.+..++.++|||||||++|
T Consensus       191 H~~~ivH~Dlkp~NIl~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~  267 (343)
T 1luf_A          191 SERKFVHRDLATRNCLVGENM---VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLW  267 (343)
T ss_dssp             HHTTCCCSCCSGGGEEECGGG---CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HhCCeecCCCCcceEEECCCC---eEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHH
Confidence            556999999999999998876   69999999998654322   223456888999999999889999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+....+....+........+    ..+++.+.+|+.+||..||.+||++.+++++
T Consensus       268 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          268 EIFSYGLQPYYGMAHEEVIYYVRDGNILACP----ENCPLELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             HHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhcCCCcCCCCChHHHHHHHhCCCcCCCC----CCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            9999 99999998888877777665433333    3678899999999999999999999999654

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.88  E-value=3.7e-23  Score=212.27  Aligned_cols=144  Identities=19%  Similarity=0.315  Sum_probs=118.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++....+||+|||+++......   ......|++.|+|||++.+..++.++|||||||++|
T Consensus       157 H~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  236 (327)
T 2yfx_A          157 EENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLW  236 (327)
T ss_dssp             HHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             hhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHH
Confidence            45699999999999999966555579999999997543222   233456889999999998889999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +|++ |..||.+....+....+........+    ..+++.+.++|.+||..||.+||++.++++|.|+-..
T Consensus       237 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~  304 (327)
T 2yfx_A          237 EIFSLGYMPYPSKSNQEVLEFVTSGGRMDPP----KNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQ  304 (327)
T ss_dssp             HHHTTSCCSSTTCCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCCcCHHHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhc
Confidence            9998 99999988887777766655433332    3678899999999999999999999999999876543

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.88  E-value=4.7e-23  Score=204.82  Aligned_cols=135  Identities=24%  Similarity=0.419  Sum_probs=103.4

Q ss_pred             CeEecCCCCCCeEEecCCC-----CCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            5 FMIVSANACQNLLVSTNEV-----TPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~-----~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      +|+||||||+|||++....     .+.+||+|||+++...... .....||+.|+|||++.+..++.++||||+|+++|+
T Consensus       128 ~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~  206 (271)
T 3dtc_A          128 PIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWE  206 (271)
T ss_dssp             CCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred             ceeecCCchHHEEEecccccccccCcceEEccCCccccccccc-ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHH
Confidence            3999999999999986321     3479999999998655432 235679999999999999899999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++|+.||.+.+.......+.....   ....+..+++.+.+++.+||..||.+|||+.|+++|
T Consensus       207 l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          207 LLTGEVPFRGIDGLAVAYGVAMNKL---ALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             HHHCCCTTTTSCHHHHHHHHHTSCC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCCCCCHHHHHHhhhcCCC---CCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            9999999999887776665554321   122334678899999999999999999999999865

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.88  E-value=4.1e-23  Score=206.77  Aligned_cols=135  Identities=21%  Similarity=0.357  Sum_probs=113.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++......  ......||+.|+|||++.+..++.++||||+||++|+
T Consensus       137 H~~~i~H~dikp~Nili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~  213 (283)
T 3gen_A          137 ESKQFLHRDLAARNCLVNDQG---VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE  213 (283)
T ss_dssp             HHTTCCCSSCSGGGEEECTTS---CEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred             HHCCccCCCCccceEEEcCCC---CEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHH
Confidence            556999999999999999876   69999999998664332  2233456788999999998899999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++ |+.||.+.+..+....+........+    ...++.+.+++.+||..+|.+|||++++++|
T Consensus       214 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          214 IYSLGKMPYERFTNSETAEHIAQGLRLYRP----HLASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             HHTTTCCTTTTSCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCccccChhHHHHHHhcccCCCCC----CcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            998 99999998888877777655333322    3567899999999999999999999999877

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.87  E-value=6.7e-23  Score=206.70  Aligned_cols=139  Identities=24%  Similarity=0.402  Sum_probs=101.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC---CCCCccccCCCcccChhhhc---cCCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQ---NHKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~---~~~~~t~~GT~~YmAPEvl~---~~~ys~ksDIWSlGv   75 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++....   ........||+.|+|||++.   +..++.++|||||||
T Consensus       137 H~~~i~H~Dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~  213 (289)
T 3og7_A          137 HAKSIIHRDLKSNNIFLHEDN---TVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGI  213 (289)
T ss_dssp             HHTTCCCSCCCGGGEEEETTT---EEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHH
T ss_pred             HhCCcccccCccceEEECCCC---CEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHH
Confidence            456999999999999999877   799999999976543   22334567999999999986   567888999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCC-CCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTEL-RFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~-~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ++|+|++|+.||.+....+........... .........+++.+.+|+.+||..||.+||++.++++.
T Consensus       214 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  282 (289)
T 3og7_A          214 VLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAE  282 (289)
T ss_dssp             HHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            999999999999886655554444433322 22223345678999999999999999999999998653

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.87  E-value=4e-23  Score=206.92  Aligned_cols=135  Identities=23%  Similarity=0.387  Sum_probs=109.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......  ......|++.|+|||++.+..++.++|||||||++|+
T Consensus       130 H~~~i~H~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  206 (281)
T 3cc6_A          130 ESINCVHRDIAVRNILVASPE---CVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWE  206 (281)
T ss_dssp             HHTTCCCCCCSGGGEEEEETT---EEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHCCcccCCCccceEEECCCC---cEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHH
Confidence            557999999999999999877   79999999998765432  2234567888999999998899999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++ |+.||......+....+........+    ..+++.+.+++.+||..||.+||++.+++++
T Consensus       207 llt~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          207 ILSFGKQPFFWLENKDVIGVLEKGDRLPKP----DLCPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHTTTCCTTTTSCGGGHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCcccCChHHHHHHHhcCCCCCCC----CCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            998 99999877766666655554333333    3578899999999999999999999999876

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.87  E-value=3.8e-23  Score=210.25  Aligned_cols=136  Identities=28%  Similarity=0.523  Sum_probs=108.4

Q ss_pred             CCCCeEecCCCCCCeEEe-cCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCC-cccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVS-TNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYD-AKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~-~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys-~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+||+++ .++   .+||+|||+++..... ......|++.|+|||++.+..+. .++|||||||++|+
T Consensus       156 H~~~i~H~dlkp~Nil~~~~~~---~~kl~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~  231 (312)
T 2iwi_A          156 HSRGVVHRDIKDENILIDLRRG---CAKLIDFGSGALLHDE-PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYD  231 (312)
T ss_dssp             HHHTEECCCCSGGGEEEETTTT---EEEECCCSSCEECCSS-CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred             HHCCeeecCCChhhEEEeCCCC---eEEEEEcchhhhcccC-cccccCCcccccCceeeecCCCCCccchHHHHHHHHHH
Confidence            445899999999999998 444   7999999999876543 34456799999999999776664 48999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      |++|+.||.+...      +... ...++    ..++..+.+||.+||..||.+||+++|+++||||......
T Consensus       232 l~~g~~pf~~~~~------~~~~-~~~~~----~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~~  293 (312)
T 2iwi_A          232 MVCGDIPFERDQE------ILEA-ELHFP----AHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAED  293 (312)
T ss_dssp             HHHSSCSCCSHHH------HHHT-CCCCC----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC----
T ss_pred             HHHCCCCCCChHH------Hhhh-ccCCc----ccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchhc
Confidence            9999999976421      2221 22333    3678899999999999999999999999999999765443

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.87  E-value=3.9e-23  Score=212.99  Aligned_cols=136  Identities=21%  Similarity=0.328  Sum_probs=110.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......   ......||+.|+|||++.+..++.++|||||||++|
T Consensus       189 H~~~ivH~Dikp~NIll~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~  265 (344)
T 1rjb_A          189 EFKSCVHRDLAARNVLVTHGK---VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLW  265 (344)
T ss_dssp             HHTTEEETTCSGGGEEEETTT---EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HhCCcccCCCChhhEEEcCCC---cEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHH
Confidence            456999999999999999877   79999999998654332   123456788999999999889999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+......+..++....   ....+..+++.+.+|+.+||..||.+||++.++++|
T Consensus       266 el~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          266 EIFSLGVNPYPGIPVDANFYKLIQNGF---KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             HHTTTSCCSSTTCCCSHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCCCcccCCcHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            9998 9999988765555544444321   112234678999999999999999999999999876

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.87  E-value=5.4e-23  Score=216.47  Aligned_cols=135  Identities=24%  Similarity=0.362  Sum_probs=110.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC---ccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA---DTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~---~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++........   ....+++.|+|||++.+..++.++|||||||++|
T Consensus       230 H~~~ivHrDlkp~Nil~~~~~---~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~  306 (377)
T 3cbl_A          230 ESKCCIHRDLAARNCLVTEKN---VLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLW  306 (377)
T ss_dssp             HHTTEECSCCSGGGEEECTTC---CEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHH
T ss_pred             HHCCcCCcccCHHHEEEcCCC---cEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHH
Confidence            456999999999999998876   7999999999875433211   1233567899999999889999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ||++ |..||.+....+....+........|    ..+++.+.+||.+||..||.+|||++++++.
T Consensus       307 el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~  368 (377)
T 3cbl_A          307 ETFSLGASPYPNLSNQQTREFVEKGGRLPCP----ELCPDAVFRLMEQCWAYEPGQRPSFSTIYQE  368 (377)
T ss_dssp             HHHTTSCCSSTTSCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            9998 99999998887777666655444333    3568899999999999999999999998643

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.87  E-value=6e-23  Score=208.84  Aligned_cols=136  Identities=18%  Similarity=0.395  Sum_probs=107.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..||+||||||+|||++.++   .+||+|||+++......   ......+++.|+|||++.+..++.++|||||||++
T Consensus       163 LH~~~ivH~dikp~NIli~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  239 (313)
T 3brb_A          163 LSNRNFLHRDLAARNCMLRDDM---TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM  239 (313)
T ss_dssp             HHTTTCCCCCCSGGGEEECTTS---CEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHH
T ss_pred             HHhCCcccCCCCcceEEEcCCC---cEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHH
Confidence            3567999999999999999876   69999999998764332   12334578889999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+|++ |..||.+.........+........    +..+++.+.+++.+||..||.+||++.+++++
T Consensus       240 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          240 WEIATRGMTPYPGVQNHEMYDYLLHGHRLKQ----PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             HHHHTTSCCSSTTCCGGGHHHHHHTTCCCCC----BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhcCCCCCccCCHHHHHHHHHcCCCCCC----CccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99999 9999998887777776665543333    34678899999999999999999999999776

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.87  E-value=6.7e-23  Score=221.33  Aligned_cols=134  Identities=26%  Similarity=0.398  Sum_probs=112.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++......  ......+++.|+|||++....++.++|||||||++||
T Consensus       301 H~~~ivHrDlkp~Nill~~~~---~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~e  377 (454)
T 1qcf_A          301 EQRNYIHRDLRAANILVSASL---VCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLME  377 (454)
T ss_dssp             HHTTCCCSSCSGGGEEECTTC---CEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HhCCccCCCCCHHHEEECCCC---cEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHH
Confidence            456999999999999999876   79999999998765322  1223456778999999998899999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |++ |+.||.+.+..+....+........|    ..+++.+.+||.+||..||.+|||+++++.
T Consensus       378 l~t~g~~P~~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          378 IVTYGRIPYPGMSNPEVIRALERGYRMPRP----ENCPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             HHTTSCCSSTTCCHHHHHHHHHHTCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            999 99999999888887777665443333    367889999999999999999999999853

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.87  E-value=7.5e-23  Score=207.29  Aligned_cols=136  Identities=26%  Similarity=0.391  Sum_probs=110.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.......   .....||+.|+|||++.+..++.++|||||||++|
T Consensus       162 H~~~i~H~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  238 (313)
T 1t46_A          162 ASKNCIHRDLAARNILLTHGR---ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW  238 (313)
T ss_dssp             HHTTCCCSCCSGGGEEEETTT---EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HHCCeecCCCccceEEEcCCC---CEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHH
Confidence            456999999999999999876   799999999987654332   23456788999999999889999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+.................   ..+..++..+.+++.+||..||.+|||+.+++++
T Consensus       239 ellt~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          239 ELFSLGSSPYPGMPVDSKFYKMIKEGFRM---LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             HHHTTTCCSSTTCCSSHHHHHHHHHTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhCCCCCCCcccchhHHHHHhccCCCC---CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            9999 999998876544444444332211   1224678899999999999999999999999765

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.87  E-value=4.3e-23  Score=225.64  Aligned_cols=141  Identities=14%  Similarity=0.166  Sum_probs=108.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--------CccccCCCcccChhhhccCCCCcccchhhH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--------ADTLCGSPLYMAPEIIQNHKYDAKADLWSV   73 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--------~~t~~GT~~YmAPEvl~~~~ys~ksDIWSl   73 (568)
                      |..+||||||||+||||+.+.....+||+|||+++.+.....        ....+||+.|+|||++.+..++.++|||||
T Consensus       120 H~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSl  199 (483)
T 3sv0_A          120 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESL  199 (483)
T ss_dssp             HHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred             HHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHH
Confidence            456999999999999995322233799999999987654321        235789999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCc---HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           74 GAILFQLVTGKPPFDGSN---QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        74 GviL~ELltG~~PF~g~~---~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ||++|+|++|+.||.+..   ..+.+..+...............++.++.+||.+||..+|.+||++++|++
T Consensus       200 Gvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          200 GYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            999999999999998743   333444443322111111122456889999999999999999999998864

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.87  E-value=5.5e-23  Score=213.22  Aligned_cols=139  Identities=12%  Similarity=0.183  Sum_probs=104.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--------CCccccCCCcccChhhhccCCCCcccchhhH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--------LADTLCGSPLYMAPEIIQNHKYDAKADLWSV   73 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--------~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSl   73 (568)
                      |..+|+||||||+|||++.++. ..+||+|||+++.+....        .....+||+.|+|||++.+..++.++|||||
T Consensus       168 H~~~ivH~Dlkp~NIll~~~~~-~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl  246 (345)
T 2v62_A          168 HENEYVHGDIKAANLLLGYKNP-DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEIL  246 (345)
T ss_dssp             HHTTEECSCCSGGGEEEESSST-TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHH
T ss_pred             HhCCeeCCCcCHHHEEEccCCC-CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHH
Confidence            4569999999999999987652 369999999998764321        1245689999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCC--cHHHHHHHHHhccCCCCCCCc-----ccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           74 GAILFQLVTGKPPFDGS--NQLQLFQNILTSTELRFPPGA-----IEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        74 GviL~ELltG~~PF~g~--~~~~~~~~Il~~~~~~~p~~~-----~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ||++|+|++|+.||.+.  +.... ..........++...     ...+++.+.+++.+||..||.+||+++++++
T Consensus       247 G~il~ell~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          247 GYCMLRWLCGKLPWEQNLKDPVAV-QTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             HHHHHHHHHSSCTTGGGTTCHHHH-HHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHHHHhCCCCccccccccHHH-HHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            99999999999999652  22222 111111111122110     1157889999999999999999999999854

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.87  E-value=8.4e-23  Score=209.87  Aligned_cols=136  Identities=15%  Similarity=0.194  Sum_probs=100.1

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhcc-----CCCCcccchhhHHHH
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQN-----HKYDAKADLWSVGAI   76 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~-----~~ys~ksDIWSlGvi   76 (568)
                      +|+||||||+|||++.++   .+||+|||+++......   .....+||+.|+|||++.+     ..++.++|||||||+
T Consensus       151 ~ivH~Dlkp~Nill~~~~---~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~i  227 (322)
T 3soc_A          151 AISHRDIKSKNVLLKNNL---TACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLV  227 (322)
T ss_dssp             EEECSCCSGGGEEECTTC---CEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHH
T ss_pred             CEEeCCCChHhEEECCCC---eEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHH
Confidence            999999999999998876   79999999998765433   2334689999999999976     345667899999999


Q ss_pred             HHHHHhCCCCCCCCc----------------HHHHHHHHHhccCCCCCCCcc--cccCHHHHHHHHHhhccCCCCCCCHH
Q 008370           77 LFQLVTGKPPFDGSN----------------QLQLFQNILTSTELRFPPGAI--EELHPDCVDLCRCLLRQNPVERITFK  138 (568)
Q Consensus        77 L~ELltG~~PF~g~~----------------~~~~~~~Il~~~~~~~p~~~~--~~ls~~~~dLI~~cL~~dP~~RpTae  138 (568)
                      +|+|++|+.||.+..                .......+......+..+..+  ...++.+.+||.+||..||.+|||+.
T Consensus       228 l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~  307 (322)
T 3soc_A          228 LWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAG  307 (322)
T ss_dssp             HHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             HHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHH
Confidence            999999999997642                112222222221111111111  12245699999999999999999999


Q ss_pred             HHHhc
Q 008370          139 EFFNH  143 (568)
Q Consensus       139 ElL~H  143 (568)
                      ++++.
T Consensus       308 ell~~  312 (322)
T 3soc_A          308 CVGER  312 (322)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.87  E-value=1.6e-22  Score=203.81  Aligned_cols=134  Identities=21%  Similarity=0.327  Sum_probs=111.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC----CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL----ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~----~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.......    .....|++.|+|||++.+..++.++|||||||++
T Consensus       134 H~~~i~H~dikp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  210 (291)
T 1xbb_A          134 EESNFVHRDLAARNVLLVTQH---YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM  210 (291)
T ss_dssp             HHTTEECSCCSGGGEEEEETT---EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred             HhCCeEcCCCCcceEEEeCCC---cEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHH
Confidence            456999999999999999877   799999999987654332    2234567889999999988899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++ |+.||.+....+....+........+    ..+++.+.+++.+||..||.+||++.++++
T Consensus       211 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          211 WEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP----AGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            99999 99999998887777666654333333    467899999999999999999999999875

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.87  E-value=1e-22  Score=219.75  Aligned_cols=132  Identities=23%  Similarity=0.405  Sum_probs=109.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++.....  .....+++.|+|||++.+..++.++|||||||++|||+
T Consensus       306 H~~~ivHrDlkp~Nill~~~~---~~kl~DfG~a~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~  380 (450)
T 1k9a_A          306 EGNNFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY  380 (450)
T ss_dssp             HHTTEECSCCCGGGEEECTTS---CEEECCCTTCEECC--------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHH
T ss_pred             HhCCeeCCCCCHhhEEECCCC---CEEEeeCCCccccccc--ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHH
Confidence            456999999999999999876   7999999999865432  22346788999999999999999999999999999999


Q ss_pred             h-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           82 T-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        82 t-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      + |+.||.+....+....+..+.....|    ..+++.+.+||.+||..||.+|||+.++++
T Consensus       381 t~g~~P~~~~~~~~~~~~i~~~~~~~~p----~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          381 SFGRVPYPRIPLKDVVPRVEKGYKMDAP----DGCPPAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             TTTCCSSTTSCTTTHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hCCCCCCCCCCHHHHHHHHHcCCCCCCC----CcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            8 99999988777777766655443333    467899999999999999999999999864

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.87  E-value=1.6e-22  Score=208.42  Aligned_cols=135  Identities=27%  Similarity=0.460  Sum_probs=113.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.......   .....+++.|+|||++.+..++.++|||||||++|
T Consensus       174 H~~~ivH~Dlkp~NIll~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  250 (334)
T 2pvf_A          174 ASQKCIHRDLAARNVLVTENN---VMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW  250 (334)
T ss_dssp             HHTTEECSCCSGGGEEECTTC---CEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHH
T ss_pred             HhCCeeCCCCccceEEEcCCC---CEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHH
Confidence            456999999999999998876   699999999987654332   23345788899999998888999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+....+....+........+    ..++..+.+++.+||..||.+||++.+++++
T Consensus       251 ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          251 EIFTLGGSPYPGIPVEELFKLLKEGHRMDKP----ANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HHHTTSCCSSTTCCHHHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhCCCCCcCcCCHHHHHHHHhcCCCCCCC----ccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            9999 99999998887777766655433333    3678899999999999999999999999776

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.87  E-value=1.3e-22  Score=203.33  Aligned_cols=136  Identities=27%  Similarity=0.441  Sum_probs=110.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..+|+||||||+||+++.++   .+||+|||+++......    ......||+.|+|||++.+..++.++|||||||++
T Consensus       138 H~~~i~H~dikp~Nili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  214 (291)
T 1u46_A          138 ESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL  214 (291)
T ss_dssp             HHTTEECSCCCGGGEEEEETT---EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred             HhCCcccCCCchheEEEcCCC---CEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHH
Confidence            456999999999999999877   79999999998765433    22345678889999999988899999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+|++ |+.||.+.+..+....+..... ..  .....++..+.+++.+||..||.+||++.+++++
T Consensus       215 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          215 WEMFTYGQEPWIGLNGSQILHKIDKEGE-RL--PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             HHHHTTSCCTTTTCCHHHHHHHHHTSCC-CC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhCCCCCcccCCHHHHHHHHHccCC-CC--CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            99999 9999999888877777655432 11  1234678999999999999999999999999763

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.87  E-value=6.7e-23  Score=206.47  Aligned_cols=138  Identities=21%  Similarity=0.335  Sum_probs=102.8

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC-----CccccCCCcccChhhhccC------CCCcccchh
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-----ADTLCGSPLYMAPEIIQNH------KYDAKADLW   71 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~-----~~t~~GT~~YmAPEvl~~~------~ys~ksDIW   71 (568)
                      ..+|+||||||+|||++.++   .+||+|||+++.......     ....+||+.|+|||++.+.      .++.++|||
T Consensus       131 ~~~ivH~Dlkp~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (301)
T 3q4u_A          131 KPAIAHRDLKSKNILVKKNG---QCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIW  207 (301)
T ss_dssp             BCEEECSCCCGGGEEECTTS---CEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHH
T ss_pred             CCCeecCCCChHhEEEcCCC---CEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHH
Confidence            67999999999999999876   799999999986543321     2345899999999999776      455789999


Q ss_pred             hHHHHHHHHHhC----------CCCCCCCc----HHHHHHHHHhcc--CCCCCCC-cccccCHHHHHHHHHhhccCCCCC
Q 008370           72 SVGAILFQLVTG----------KPPFDGSN----QLQLFQNILTST--ELRFPPG-AIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        72 SlGviL~ELltG----------~~PF~g~~----~~~~~~~Il~~~--~~~~p~~-~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      ||||++|+|++|          ..||....    ............  ....+.. .....++.+.+|+.+||..||.+|
T Consensus       208 slG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R  287 (301)
T 3q4u_A          208 AFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSAR  287 (301)
T ss_dssp             HHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGS
T ss_pred             HHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhC
Confidence            999999999999          88886532    223333333221  1112211 112345789999999999999999


Q ss_pred             CCHHHHHhc
Q 008370          135 ITFKEFFNH  143 (568)
Q Consensus       135 pTaeElL~H  143 (568)
                      ||+.++++.
T Consensus       288 ps~~~i~~~  296 (301)
T 3q4u_A          288 LTALRIKKT  296 (301)
T ss_dssp             CCHHHHHHH
T ss_pred             CCHHHHHHH
Confidence            999999653

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.87  E-value=1.1e-22  Score=201.45  Aligned_cols=135  Identities=23%  Similarity=0.441  Sum_probs=112.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+||+++.++   .+||+|||+++......  ......|++.|+|||++.+..++.++||||+|+++|+
T Consensus       121 H~~~i~H~dl~p~Nili~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  197 (267)
T 3t9t_A          121 EEACVIHRDLAARNCLVGENQ---VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE  197 (267)
T ss_dssp             HHTTCCCSSCCGGGEEECGGG---CEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HhCCcccCCCchheEEECCCC---CEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHH
Confidence            556999999999999998776   69999999998654322  2233467788999999998889999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++ |..||.+....+....+........+    ...++.+.+++.+||..||.+||++.+++++
T Consensus       198 l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          198 VFSEGKIPYENRSNSEVVEDISTGFRLYKP----RLASTHVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHHHTTCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhccCCCCCCCCCHHHHHHHHhcCCcCCCC----ccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999 89999998888777777654333222    3568899999999999999999999999765

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.87  E-value=1.4e-22  Score=203.34  Aligned_cols=136  Identities=23%  Similarity=0.362  Sum_probs=105.6

Q ss_pred             CCCC--eEecCCCCCCeEEecCCC--CCcEEEeecccceecCCCCCCccccCCCcccChhhh--ccCCCCcccchhhHHH
Q 008370            2 CYVF--MIVSANACQNLLVSTNEV--TPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEII--QNHKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~--IIHrDLKP~NILL~~~~~--~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl--~~~~ys~ksDIWSlGv   75 (568)
                      |..+  |+||||||+|||++.++.  ...+||+|||+++....  ......||+.|+|||++  ....++.++||||+||
T Consensus       139 H~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~  216 (287)
T 4f0f_A          139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAM  216 (287)
T ss_dssp             HTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHH
T ss_pred             HhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHH
Confidence            4456  999999999999987652  23499999999975433  34456899999999998  4556788999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHH--HHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           76 ILFQLVTGKPPFDGSNQLQ--LFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~--~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ++|+|++|+.||.+.....  ....+....   .++..+..+++.+.+|+.+||..||.+||+++++++
T Consensus       217 ~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          217 ILYTILTGEGPFDEYSYGKIKFINMIREEG---LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHHHHHHSSCTTTTCCCCHHHHHHHHHHSC---CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCCCCccccccHHHHHHHHhccC---CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            9999999999998754332  233333222   222334577899999999999999999999999865

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.87  E-value=6.2e-23  Score=210.03  Aligned_cols=139  Identities=19%  Similarity=0.233  Sum_probs=105.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---CCCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.....   .......||+.|+|||++.+..++.++|||||||++|
T Consensus       156 H~~~ivH~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~  232 (321)
T 2qkw_B          156 HTRAIIHRDVKSINILLDENF---VPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLF  232 (321)
T ss_dssp             HHTTEECSCCCSTTEEECTTC---CEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHH
T ss_pred             cCCCeecCCCCHHHEEECCCC---CEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHH
Confidence            456999999999999998876   7999999999875432   2234457899999999998889999999999999999


Q ss_pred             HHHhCCCCCCCCcHHHH------HHHHHhccC------CCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVTGKPPFDGSNQLQL------FQNILTSTE------LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~------~~~Il~~~~------~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++|+.||.+....+.      .........      ...........+..+.+++.+||..||.+|||+.++++|
T Consensus       233 ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          233 EVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             HHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            99999999976432211      111111111      111122223456788999999999999999999999876

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.86  E-value=2.5e-22  Score=200.72  Aligned_cols=134  Identities=26%  Similarity=0.373  Sum_probs=112.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+||+++.++   .+||+|||+++......  ......+++.|+|||++.+..++.++|||||||++|+
T Consensus       126 H~~~i~H~dikp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  202 (279)
T 1qpc_A          126 EERNYIHRDLRAANILVSDTL---SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE  202 (279)
T ss_dssp             HHTTEECSCCSGGGEEECTTS---CEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             HHCCeeccCCCHhhEEEcCCC---CEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHH
Confidence            456999999999999998776   69999999998765433  2233456788999999998889999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |++ |+.||.+....+....+........    +..+++.+.+++.+||..||.+|||++++++
T Consensus       203 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          203 IVTHGRIPYPGMTNPEVIQNLERGYRMVR----PDNCPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HHTTTCCSSTTCCHHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCcccCHHHHHHHHhcccCCCC----cccccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            999 9999999888777777665433322    2467889999999999999999999999865

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.86  E-value=7.6e-23  Score=207.50  Aligned_cols=135  Identities=28%  Similarity=0.466  Sum_probs=109.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+||+++.++   .+||+|||+++.......   .....||+.|+|||++.+..++.++|||||||++|
T Consensus       165 H~~~i~H~dikp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~  241 (316)
T 2xir_A          165 ASRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLW  241 (316)
T ss_dssp             HHTTCCCSCCSGGGEEECGGG---CEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HhCCcccccCccceEEECCCC---CEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHH
Confidence            456999999999999998776   699999999987643321   23456788999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHH-HHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVT-GKPPFDGSNQLQLF-QNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~-~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++ |..||.+......+ ..+........+    ..+++.+.+++.+||..||.+||++.++++|
T Consensus       242 ~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          242 EIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             HHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhCCCCCCcccchhHHHHHHhccCccCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9998 99999876643333 333333222222    3578899999999999999999999999887

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.86  E-value=2.1e-22  Score=200.89  Aligned_cols=133  Identities=23%  Similarity=0.324  Sum_probs=110.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++.++   .+||+|||+++............||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       139 H~~~i~H~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  215 (284)
T 2a19_B          139 HSKKLINRDLKPSNIFLVDTK---QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL  215 (284)
T ss_dssp             HHTTEECSCCSGGGEEEEETT---EEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHH
T ss_pred             HhCCeeeccCCHHHEEEcCCC---CEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHH
Confidence            456999999999999999877   79999999998877655556678999999999999989999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      +|..||...  ......+...   .++    ..++..+.+++.+||..||.+||++.++++|.+.
T Consensus       216 ~~~~~~~~~--~~~~~~~~~~---~~~----~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~  271 (284)
T 2a19_B          216 HVCDTAFET--SKFFTDLRDG---IIS----DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTV  271 (284)
T ss_dssp             SCCSSHHHH--HHHHHHHHTT---CCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hcCCcchhH--HHHHHHhhcc---ccc----ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence            999988532  2222223221   122    3567899999999999999999999999999765

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.86  E-value=1.3e-22  Score=204.74  Aligned_cols=135  Identities=21%  Similarity=0.320  Sum_probs=101.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++......    ......|++.|+|||++.+..++.++|||||||++
T Consensus       131 H~~~ivH~Dikp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l  207 (295)
T 3ugc_A          131 GTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL  207 (295)
T ss_dssp             HHTTCCCSCCSGGGEEEEETT---EEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             hcCCcccCCCCHhhEEEcCCC---eEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHH
Confidence            557999999999999999887   79999999998765332    22334577789999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCcHH----------------HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           78 FQLVTGKPPFDGSNQL----------------QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~----------------~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      |+|++|..||......                .....+.......    .+..+++.+.+|+.+||..||.+|||+.+++
T Consensus       208 ~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~el~  283 (295)
T 3ugc_A          208 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLA  283 (295)
T ss_dssp             HHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCC----CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             HHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCC----CCcCcCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence            9999999998643211                1122222222222    2346789999999999999999999999996


Q ss_pred             hc
Q 008370          142 NH  143 (568)
Q Consensus       142 ~H  143 (568)
                      +.
T Consensus       284 ~~  285 (295)
T 3ugc_A          284 LR  285 (295)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.86  E-value=3e-22  Score=204.37  Aligned_cols=132  Identities=28%  Similarity=0.447  Sum_probs=100.0

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhC
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG   83 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG   83 (568)
                      .||+||||||+|||++.++.  ++||+|||+++.....  .....||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus       124 ~~ivH~dlkp~NIll~~~~~--~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g  199 (307)
T 2eva_A          124 KALIHRDLKPPNLLLVAGGT--VLKICDFGTACDIQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITR  199 (307)
T ss_dssp             SCCCCCCCSGGGEEEETTTT--EEEECCCCC--------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHT
T ss_pred             CCeecCCCChhHEEEeCCCC--EEEEcccccccccccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHC
Confidence            68999999999999987763  5899999999765432  2345799999999999999999999999999999999999


Q ss_pred             CCCCCCCc--HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           84 KPPFDGSN--QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        84 ~~PF~g~~--~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +.||....  .......+.....    +.....+++.+.+++.+||..||.+|||+++++++
T Consensus       200 ~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          200 RKPFDEIGGPAFRIMWAVHNGTR----PPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             CCTTTTTCSSHHHHHHHHHTTCC----CCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCchhhCccHHHHHHHHhcCCC----CCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            99998543  3333333333222    22334678999999999999999999999999765

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=9.6e-23  Score=215.08  Aligned_cols=135  Identities=24%  Similarity=0.399  Sum_probs=101.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC-----CccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-----ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~-----~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++.......     .....|++.|+|||++.+..++.++|||||||+
T Consensus       209 H~~~ivHrDlkp~NIll~~~~---~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~i  285 (373)
T 3c1x_A          209 ASKKFVHRDLAARNCMLDEKF---TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL  285 (373)
T ss_dssp             HHTTCCCSCCCGGGEEECTTC---CEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             HHCCEecCccchheEEECCCC---CEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHH
Confidence            456999999999999998876   699999999986643221     223457788999999999999999999999999


Q ss_pred             HHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           77 LFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        77 L~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|+|++ |.+||.+.+..+....+........|    ..++..+.++|.+||..||.+||++.+++++
T Consensus       286 l~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p----~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          286 LWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP----EYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999 78889877766666556554333322    3578899999999999999999999999765

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=3.1e-22  Score=201.27  Aligned_cols=135  Identities=22%  Similarity=0.386  Sum_probs=108.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......     ......|++.|+|||.+.+..++.++|||||||+
T Consensus       141 H~~~i~H~dikp~Nili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  217 (298)
T 3pls_A          141 AEQKFVHRDLAARNCMLDESF---TVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVL  217 (298)
T ss_dssp             HHTTCCCSCCSGGGEEECTTC---CEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             HhCCcccCCCCcceEEEcCCC---cEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHH
Confidence            556999999999999998876   69999999998654322     2334567889999999999999999999999999


Q ss_pred             HHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           77 LFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        77 L~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|+|++ |.+||.+.+..+....+........+    ..+++.+.+++.+||..||.+|||++++++.
T Consensus       218 l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~  281 (298)
T 3pls_A          218 LWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQP----EYCPDSLYQVMQQCWEADPAVRPTFRVLVGE  281 (298)
T ss_dssp             HHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCC----ccchHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            999999 55666666666666555544333322    3578899999999999999999999999654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=3e-22  Score=206.91  Aligned_cols=135  Identities=23%  Similarity=0.366  Sum_probs=106.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......    ......+|+.|+|||++.+..++.++|||||||++
T Consensus       164 H~~~ivH~Dikp~NIl~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  240 (333)
T 1mqb_A          164 ANMNYVHRDLAARNILVNSNL---VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVM  240 (333)
T ss_dssp             HHTTCCCSCCCGGGEEECTTC---CEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHH
T ss_pred             HhCCeeCCCCChheEEECCCC---cEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHH
Confidence            456999999999999998876   79999999998765322    11223467889999999988999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+|++ |..||.+....+....+........+    ..+++.+.+++.+||..||.+||++.+++++
T Consensus       241 ~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          241 WEVMTYGERPYWELSNHEVMKAINDGFRLPTP----MDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             HHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC----TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHcCCCCCcccCCHHHHHHHHHCCCcCCCc----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            99998 99999988887777777654333322    3678899999999999999999999999765

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.86  E-value=1.2e-22  Score=208.38  Aligned_cols=140  Identities=24%  Similarity=0.379  Sum_probs=110.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......   ......||+.|+|||++.+..++.++|||||||++|
T Consensus       181 H~~~ivH~Dlkp~NIl~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  257 (333)
T 2i1m_A          181 ASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLW  257 (333)
T ss_dssp             HHTTEECSCCSGGGCEEEGGG---EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             hcCCcccCCcccceEEECCCC---eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHH
Confidence            456999999999999999876   79999999998654322   123456788999999999889999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      +|++ |..||.+......+..+......   ...+...++.+.+++.+||..||.+|||+.+++++  +..+
T Consensus       258 el~t~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~--L~~~  324 (333)
T 2i1m_A          258 EIFSLGLNPYPGILVNSKFYKLVKDGYQ---MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSF--LQEQ  324 (333)
T ss_dssp             HHTTTSCCSSTTCCSSHHHHHHHHHTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH--HHHH
T ss_pred             HHHcCCCCCCcccchhHHHHHHHhcCCC---CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHH--HHHH
Confidence            9998 99999887655554444443221   11223568899999999999999999999999764  4444

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.86  E-value=1.9e-22  Score=201.76  Aligned_cols=132  Identities=21%  Similarity=0.379  Sum_probs=104.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+||+++.++   .+||+|||+++.....  .....+++.|+|||++.+..++.++|||||||++|+|+
T Consensus       134 H~~~i~H~dlkp~Nil~~~~~---~~~l~Dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  208 (278)
T 1byg_A          134 EGNNFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY  208 (278)
T ss_dssp             HHTTCCCSCCSGGGEEECTTS---CEEECCCCC--------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             HhCCccccCCCcceEEEeCCC---cEEEeecccccccccc--ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHH
Confidence            456999999999999999876   6999999999765432  23446788999999999889999999999999999999


Q ss_pred             h-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           82 T-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        82 t-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      + |..||.+.+..+....+.......    .+..+++.+.+++.+||..||.+||++.++++
T Consensus       209 t~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          209 SFGRVPYPRIPLKDVVPRVEKGYKMD----APDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             TTSCCSCTTSCGGGHHHHHTTTCCCC----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hCCCCCCCCCCHHHHHHHHhcCCCCC----CcccCCHHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            8 999999887766666665443322    23467899999999999999999999999865

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.86  E-value=1.9e-22  Score=217.81  Aligned_cols=134  Identities=26%  Similarity=0.386  Sum_probs=107.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++.......  .....+++.|+|||++.+..++.++|||||||++||
T Consensus       297 H~~~ivHrDlkp~Nill~~~~---~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~e  373 (452)
T 1fmk_A          297 ERMNYVHRDLRAANILVGENL---VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE  373 (452)
T ss_dssp             HHTTCCCSCCSGGGEEECGGG---CEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HhCCeeCCCCChhhEEECCCC---CEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHH
Confidence            456999999999999998776   699999999987653321  223456788999999998899999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |++ |+.||.+....+....+........|    ..+++.+.+||.+||..||.+|||++++++
T Consensus       374 l~t~g~~P~~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          374 LTTKGRVPYPGMVNREVLDQVERGYRMPCP----PECPESLHDLMCQCWRKEPEERPTFEYLQA  433 (452)
T ss_dssp             HHTTTCCSSTTCCHHHHHHHHHTTCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            999 99999999888888777655443333    367889999999999999999999999864

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.86  E-value=5e-22  Score=203.29  Aligned_cols=137  Identities=22%  Similarity=0.315  Sum_probs=101.0

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC-----CccccCCCcccChhhhccCCCCcc------cchhh
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-----ADTLCGSPLYMAPEIIQNHKYDAK------ADLWS   72 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~-----~~t~~GT~~YmAPEvl~~~~ys~k------sDIWS   72 (568)
                      .+|+||||||+|||++.++   .+||+|||+++.......     ....+||+.|+|||++.+..+...      +||||
T Consensus       161 ~~ivH~Dikp~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diws  237 (337)
T 3mdy_A          161 PAIAHRDLKSKNILVKKNG---TCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYS  237 (337)
T ss_dssp             CCEECSCCCGGGEEECTTS---CEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHH
T ss_pred             CCEEecccchHHEEECCCC---CEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHH
Confidence            3999999999999999876   699999999987654322     235689999999999987766665      89999


Q ss_pred             HHHHHHHHHhC----------CCCCCCCc----HHHHHHHHHhcc--CCCCCCCc-ccccCHHHHHHHHHhhccCCCCCC
Q 008370           73 VGAILFQLVTG----------KPPFDGSN----QLQLFQNILTST--ELRFPPGA-IEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        73 lGviL~ELltG----------~~PF~g~~----~~~~~~~Il~~~--~~~~p~~~-~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      |||++|||++|          ..||....    ............  ...++... ...+++.+.+|+.+||..||.+||
T Consensus       238 lG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp  317 (337)
T 3mdy_A          238 FGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRL  317 (337)
T ss_dssp             HHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSC
T ss_pred             HHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCC
Confidence            99999999999          77775432    222233332221  11122111 124567799999999999999999


Q ss_pred             CHHHHHhc
Q 008370          136 TFKEFFNH  143 (568)
Q Consensus       136 TaeElL~H  143 (568)
                      |+.++++|
T Consensus       318 s~~ell~~  325 (337)
T 3mdy_A          318 TALRVKKT  325 (337)
T ss_dssp             CHHHHHHH
T ss_pred             CHHHHHHH
Confidence            99999876

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.86  E-value=2e-22  Score=203.23  Aligned_cols=135  Identities=24%  Similarity=0.387  Sum_probs=108.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......     ......||+.|+|||++.+..++.++||||+||+
T Consensus       145 H~~~i~H~dikp~Nil~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  221 (298)
T 3f66_A          145 ASKKFVHRDLAARNCMLDEKF---TVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL  221 (298)
T ss_dssp             HHTTCCCSCCSGGGEEECTTC---CEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             HhCCccCCCCchheEEECCCC---CEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHH
Confidence            456999999999999998876   79999999998765332     1233567888999999999999999999999999


Q ss_pred             HHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           77 LFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        77 L~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|+|++ |.+||.+.+..+....+........+    ..++..+.+++.+||..||.+||++.++++.
T Consensus       222 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~~p~~Rps~~ell~~  285 (298)
T 3f66_A          222 LWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP----EYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  285 (298)
T ss_dssp             HHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCC----ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            999999 77788877766666666554433322    3567899999999999999999999999653

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.86  E-value=8.9e-23  Score=208.26  Aligned_cols=132  Identities=29%  Similarity=0.487  Sum_probs=86.4

Q ss_pred             CCCC--eEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC-------------CccccCCCcccChhhh---ccCC
Q 008370            2 CYVF--MIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL-------------ADTLCGSPLYMAPEII---QNHK   63 (568)
Q Consensus         2 ~~~~--IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~-------------~~t~~GT~~YmAPEvl---~~~~   63 (568)
                      |..+  |+||||||+|||++.++   .+||+|||+++.......             ....+||+.|+|||++   .+..
T Consensus       153 H~~~~~ivH~Dikp~NIl~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~  229 (337)
T 3ll6_A          153 HRQKPPIIHRDLKVENLLLSNQG---TIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFP  229 (337)
T ss_dssp             HTSSSCCBCCCCCGGGCEECTTS---CEEBCCCTTCBCCSSCC-------------------------------CCTTSC
T ss_pred             HhCCCCEEEccCCcccEEECCCC---CEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCC
Confidence            4456  99999999999999876   699999999987653221             1145699999999998   5667


Q ss_pred             CCcccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           64 YDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        64 ys~ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ++.++|||||||++|+|++|+.||.+..........     ...+.  ....+..+.+|+.+||..||.+||++.|+++|
T Consensus       230 ~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          230 IGEKQDIWALGCILYLLCFRQHPFEDGAKLRIVNGK-----YSIPP--HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             SSHHHHHHHHHHHHHHHHHSSCCC-----------------CCCCT--TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CChHHhHHHHHHHHHHHHhCCCCCcchhHHHhhcCc-----ccCCc--ccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            889999999999999999999999875544332211     11121  23556778999999999999999999999887

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.86  E-value=1.6e-22  Score=228.51  Aligned_cols=153  Identities=24%  Similarity=0.334  Sum_probs=118.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++.++....+||+|||+++...........+||+.|+|||++.+..++.++||||+||++|+|+
T Consensus       138 Hs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLl  217 (676)
T 3qa8_A          138 HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECI  217 (676)
T ss_dssp             HHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHH
T ss_pred             HHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHH
Confidence            45699999999999999988766679999999999877666666788999999999999999999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHH---------HHh----cc------CCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           82 TGKPPFDGSNQLQLFQN---------ILT----ST------ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~---------Il~----~~------~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      +|..||.+......+..         +..    ..      ..+.+......+++.+.+|+.+||..||.+|||+.++++
T Consensus       218 tG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~  297 (676)
T 3qa8_A          218 TGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPN  297 (676)
T ss_dssp             SSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCC
T ss_pred             HCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhc
Confidence            99999976543221100         000    00      111122233456788999999999999999999999999


Q ss_pred             chhHHHhHHhhh
Q 008370          143 HRFLGELRQTVH  154 (568)
Q Consensus       143 Hpff~~~~~~~~  154 (568)
                      ||||..+.....
T Consensus       298 hp~F~~l~~iL~  309 (676)
T 3qa8_A          298 VGCFQALDSILS  309 (676)
T ss_dssp             CTTHHHHHHHHC
T ss_pred             CHHHHHHHHHHh
Confidence            999998876543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.86  E-value=1.3e-22  Score=206.28  Aligned_cols=140  Identities=24%  Similarity=0.382  Sum_probs=107.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---------------CccccCCCcccChhhhccCCCCc
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---------------ADTLCGSPLYMAPEIIQNHKYDA   66 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---------------~~t~~GT~~YmAPEvl~~~~ys~   66 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++.......               ....+||+.|+|||++.+..++.
T Consensus       125 H~~~ivH~dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  201 (310)
T 3s95_A          125 HSMNIIHRDLNSHNCLVRENK---NVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDE  201 (310)
T ss_dssp             HHTTEECSCCSTTSEEECTTS---CEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCT
T ss_pred             HhCCccCCCCCcCeEEECCCC---CEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCc
Confidence            557999999999999999876   699999999987643221               12568999999999999999999


Q ss_pred             ccchhhHHHHHHHHHhCCCCCCCCcHHH-----HHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           67 KADLWSVGAILFQLVTGKPPFDGSNQLQ-----LFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        67 ksDIWSlGviL~ELltG~~PF~g~~~~~-----~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      ++|||||||++|+|++|..||.......     ........   ..+    ..+++.+.+++.+||..||.+|||+.+++
T Consensus       202 ~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~~~~l~~li~~~l~~dP~~Rps~~~l~  274 (310)
T 3s95_A          202 KVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR---YCP----PNCPPSFFPITVRCCDLDPEKRPSFVKLE  274 (310)
T ss_dssp             HHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH---TCC----TTCCTTHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc---cCC----CCCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence            9999999999999999999987532110     01111111   112    35677899999999999999999999997


Q ss_pred             hchhHHHhHHhh
Q 008370          142 NHRFLGELRQTV  153 (568)
Q Consensus       142 ~Hpff~~~~~~~  153 (568)
                      +  ++..++...
T Consensus       275 ~--~L~~l~~~~  284 (310)
T 3s95_A          275 H--WLETLRMHL  284 (310)
T ss_dssp             H--HHHHHHHHH
T ss_pred             H--HHHHHHHhc
Confidence            6  666665543

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.86  E-value=2.3e-22  Score=219.78  Aligned_cols=134  Identities=26%  Similarity=0.447  Sum_probs=110.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++.......  .....+++.|+|||++.+..|+.++|||||||++||
T Consensus       335 H~~~ivHrDlkp~NIll~~~~---~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~e  411 (495)
T 1opk_A          335 EKKNFIHRNLAARNCLVGENH---LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE  411 (495)
T ss_dssp             HHTTEECSCCSGGGEEECGGG---CEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             HhCCcccCCCChhhEEECCCC---cEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHH
Confidence            456999999999999998876   799999999987654321  223456778999999998999999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |++ |..||.+.+..+....+........|    ..+++.+.+||.+||..||.+|||+.++++
T Consensus       412 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          412 IATYGMSPYPGIDLSQVYELLEKDYRMERP----EGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             HHTTSCCSSTTCCGGGHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            999 99999998877766666544333333    467889999999999999999999999864

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.86  E-value=1.7e-22  Score=202.47  Aligned_cols=135  Identities=26%  Similarity=0.442  Sum_probs=111.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+||+++.++   .+||+|||+++.......  .....||+.|+|||++.+..++.++||||+|+++|+
T Consensus       128 H~~~i~H~dikp~Nil~~~~~---~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  204 (288)
T 3kfa_A          128 EKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWE  204 (288)
T ss_dssp             HHHTCCCSCCSGGGEEECGGG---CEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HHCCccCCCCCcceEEEcCCC---CEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHH
Confidence            445899999999999998876   699999999987654332  233456788999999998899999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++ |..||.+.+.......+........+    ..+++.+.+|+.+||..||.+||++.++++.
T Consensus       205 ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~  265 (288)
T 3kfa_A          205 IATYGMSPYPGIDLSQVYELLEKDYRMERP----EGCPEKVYELMRACWQWNPSDRPSFAEIHQA  265 (288)
T ss_dssp             HHTTSCCSSTTCCGGGHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHhccCCCCCC----CCCCHHHHHHHHHHhCCChhhCcCHHHHHHH
Confidence            999 99999988777666656544333322    4678999999999999999999999999653

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.86  E-value=2.7e-22  Score=211.40  Aligned_cols=134  Identities=20%  Similarity=0.333  Sum_probs=100.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC----CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL----ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~----~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++.......    .....+++.|+|||++.+..++.++|||||||++
T Consensus       164 H~~~ivH~Dlkp~NIll~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il  240 (373)
T 2qol_A          164 SDMGYVHRDLAARNILINSNL---VCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVL  240 (373)
T ss_dssp             HHTTCCCSCCCGGGEEECTTC---CEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHCCeeCCCCCcceEEEcCCC---CEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHH
Confidence            456999999999999998876   799999999987653321    1123457789999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |||++ |+.||.+....+....+........+    ..++..+.+++.+||..||.+||+++++++
T Consensus       241 ~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          241 WEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP----MDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             HHHHTTC-CTTTTCCHHHHHHHHHTTEECCCC----TTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----ccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            99998 99999998887777766554333222    367889999999999999999999999975

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.85  E-value=1.6e-22  Score=214.23  Aligned_cols=142  Identities=23%  Similarity=0.366  Sum_probs=108.3

Q ss_pred             CCCCeEecCCCCCCeEEecC-CCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc--------CCCCcccchhh
Q 008370            2 CYVFMIVSANACQNLLVSTN-EVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN--------HKYDAKADLWS   72 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~-~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~--------~~ys~ksDIWS   72 (568)
                      |..||+||||||+|||+..+ .....+||+|||+++...........+||+.|+|||++..        ..++.++||||
T Consensus       129 H~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwS  208 (396)
T 4eut_A          129 RENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWS  208 (396)
T ss_dssp             HHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHH
T ss_pred             HHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHH
Confidence            45699999999999998322 2233799999999998876666667889999999999864        56788999999


Q ss_pred             HHHHHHHHHhCCCCCCC----CcHHHHHHHHHhccCCC--------------------CCCCcccccCHHHHHHHHHhhc
Q 008370           73 VGAILFQLVTGKPPFDG----SNQLQLFQNILTSTELR--------------------FPPGAIEELHPDCVDLCRCLLR  128 (568)
Q Consensus        73 lGviL~ELltG~~PF~g----~~~~~~~~~Il~~~~~~--------------------~p~~~~~~ls~~~~dLI~~cL~  128 (568)
                      |||++|+|++|+.||.+    ....+.+.++.......                    .+......++..+.+++.+||.
T Consensus       209 lG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~  288 (396)
T 4eut_A          209 IGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILE  288 (396)
T ss_dssp             HHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhc
Confidence            99999999999999964    23345555565443211                    1111223455678899999999


Q ss_pred             cCCCCCCCHHHHHhc
Q 008370          129 QNPVERITFKEFFNH  143 (568)
Q Consensus       129 ~dP~~RpTaeElL~H  143 (568)
                      .||.+||++++++++
T Consensus       289 ~dP~~R~s~~e~l~~  303 (396)
T 4eut_A          289 ADQEKCWGFDQFFAE  303 (396)
T ss_dssp             CCTTTSCCHHHHHHH
T ss_pred             cChhhhccHHHHHHH
Confidence            999999999998654

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.85  E-value=4e-22  Score=223.79  Aligned_cols=134  Identities=21%  Similarity=0.322  Sum_probs=109.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC----CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL----ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~----~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..+||||||||+|||++.++   .+||+|||+++.+.....    .....+++.|+|||++.+..|+.++|||||||++
T Consensus       453 H~~~iiHrDlkp~NILl~~~~---~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l  529 (613)
T 2ozo_A          453 EEKNFVHRNLAARNVLLVNRH---YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM  529 (613)
T ss_dssp             HHTTCCCSCCSGGGEEEEETT---EEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHCCEEcCcCCHHHEEEcCCC---cEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHH
Confidence            456999999999999999877   799999999987643321    1223456889999999989999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |||++ |+.||.+.+..+....+..+.....|    ..+++.+.+||.+||..+|.+||++.++++
T Consensus       530 ~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p----~~~~~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          530 WEALSYGQKPYKKMKGPEVMAFIEQGKRMECP----PECPPELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             HHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             HHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCC----CcCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99998 99999998888888777765544444    367899999999999999999999999853

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.85  E-value=2.4e-22  Score=206.10  Aligned_cols=136  Identities=18%  Similarity=0.243  Sum_probs=98.1

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---------CCccccCCCcccChhhhcc-------CCCCccc
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---------LADTLCGSPLYMAPEIIQN-------HKYDAKA   68 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---------~~~t~~GT~~YmAPEvl~~-------~~ys~ks   68 (568)
                      +|+||||||+|||++.++   .+||+|||+++.+....         .....+||+.|+|||++.+       ..++.++
T Consensus       140 ~ivH~Dikp~Nill~~~~---~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~  216 (336)
T 3g2f_A          140 AISHRDLNSRNVLVKNDG---TCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQV  216 (336)
T ss_dssp             CEECSSCSGGGEEECTTS---CEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHH
T ss_pred             ceeecccccceEEEcCCC---cEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCccccccccccccc
Confidence            999999999999999876   69999999998765322         2234579999999999976       4566789


Q ss_pred             chhhHHHHHHHHHhCCCCCCCCc-----------------HHHHHHHHHhcc--CCCCCCCc--ccccCHHHHHHHHHhh
Q 008370           69 DLWSVGAILFQLVTGKPPFDGSN-----------------QLQLFQNILTST--ELRFPPGA--IEELHPDCVDLCRCLL  127 (568)
Q Consensus        69 DIWSlGviL~ELltG~~PF~g~~-----------------~~~~~~~Il~~~--~~~~p~~~--~~~ls~~~~dLI~~cL  127 (568)
                      |||||||++|+|++|..||....                 .......+....  ...+|...  ....++.+.+||.+||
T Consensus       217 DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl  296 (336)
T 3g2f_A          217 DMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCW  296 (336)
T ss_dssp             HHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHS
T ss_pred             chHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHh
Confidence            99999999999999976653211                 111112222111  12222211  1124567999999999


Q ss_pred             ccCCCCCCCHHHHHhc
Q 008370          128 RQNPVERITFKEFFNH  143 (568)
Q Consensus       128 ~~dP~~RpTaeElL~H  143 (568)
                      ..||.+|||+.|+++.
T Consensus       297 ~~dP~~Rps~~e~l~~  312 (336)
T 3g2f_A          297 DQDAEARLTAQXAEER  312 (336)
T ss_dssp             CSSGGGSCCHHHHHHH
T ss_pred             cCChhhCcchHHHHHH
Confidence            9999999999999653

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.85  E-value=3e-22  Score=205.44  Aligned_cols=135  Identities=21%  Similarity=0.325  Sum_probs=106.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......    ......||+.|+|||++.+..++.++|||||||++
T Consensus       144 H~~~ivH~Dikp~NIl~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  220 (327)
T 3lxl_A          144 GSRRCVHRDLAARNILVESEA---HVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVL  220 (327)
T ss_dssp             HHTTEECSCCSGGGEEEEETT---EEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred             HhCCccCCCCChhhEEECCCC---CEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHH
Confidence            456999999999999999877   79999999998765433    23345688889999999998999999999999999


Q ss_pred             HHHHhCCCCCCCCcHH---------------HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVTGKPPFDGSNQL---------------QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~---------------~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++|..||......               .....+......    ..+..+++.+.+|+.+||..||.+|||+.++++
T Consensus       221 ~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  296 (327)
T 3lxl_A          221 YELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRL----PAPPACPAEVHELMKLCWAPSPQDRPSFSALGP  296 (327)
T ss_dssp             HHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCC----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCC----CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9999999998654321               122222222222    223467899999999999999999999999976


Q ss_pred             c
Q 008370          143 H  143 (568)
Q Consensus       143 H  143 (568)
                      +
T Consensus       297 ~  297 (327)
T 3lxl_A          297 Q  297 (327)
T ss_dssp             H
T ss_pred             H
Confidence            5

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.85  E-value=3.8e-22  Score=224.97  Aligned_cols=135  Identities=21%  Similarity=0.330  Sum_probs=110.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..+||||||||+|||++.++   .+||+|||+++.+....    ......||+.|+|||++.+..|+.++|||||||++
T Consensus       486 H~~~iiHrDLkp~NILl~~~~---~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l  562 (635)
T 4fl3_A          486 EESNFVHRDLAARNVLLVTQH---YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM  562 (635)
T ss_dssp             HHTTCCCSCCSGGGEEEEETT---EEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHCCEeCCCCChHhEEEeCCC---CEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHH
Confidence            456999999999999999877   79999999998765432    12234567889999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |||++ |+.||.+.+..+....+........|    ..+++++.+||.+||..||.+||+++++++.
T Consensus       563 ~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p----~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~  625 (635)
T 4fl3_A          563 WEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP----AGCPREMYDLMNLCWTYDVENRPGFAAVELR  625 (635)
T ss_dssp             HHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            99998 99999999988888777665444443    3678999999999999999999999998653

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.85  E-value=9.6e-22  Score=194.40  Aligned_cols=132  Identities=19%  Similarity=0.322  Sum_probs=107.2

Q ss_pred             CCCC--eEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCc---ccchhhHHHH
Q 008370            2 CYVF--MIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDA---KADLWSVGAI   76 (568)
Q Consensus         2 ~~~~--IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~---ksDIWSlGvi   76 (568)
                      |..+  |+||||||+|||++.++   .+||+|||++....    .....||+.|+|||++.+..++.   ++|||||||+
T Consensus       128 H~~~~~i~H~dikp~Nil~~~~~---~~~l~~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~i  200 (271)
T 3kmu_A          128 HTLEPLIPRHALNSRSVMIDEDM---TARISMADVKFSFQ----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVL  200 (271)
T ss_dssp             TTSSSCCTTCCCSGGGEEECTTS---CEEEEGGGSCCTTS----CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHH
T ss_pred             hcCCCceecCCCccceEEEcCCc---ceeEEeccceeeec----ccCccCCccccChhhhccCCCCCCCchhhHHHHHHH
Confidence            4556  99999999999999876   68999998875432    23457899999999998766554   7999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|+|++|+.||.+.+..+....+.....   .+..+..+++.+.+++.+||..||.+|||++++++.
T Consensus       201 l~el~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  264 (271)
T 3kmu_A          201 LWELVTREVPFADLSNMEIGMKVALEGL---RPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPI  264 (271)
T ss_dssp             HHHHHHCSCTTTTSCHHHHHHHHHHSCC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhCCCCccccChHHHHHHHHhcCC---CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999888777666654432   122334678999999999999999999999999653

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.85  E-value=7.9e-22  Score=200.55  Aligned_cols=134  Identities=18%  Similarity=0.235  Sum_probs=105.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC------CCCCccccCCCcccChhhhcc---------CCCCc
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP------QDLADTLCGSPLYMAPEIIQN---------HKYDA   66 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~------~~~~~t~~GT~~YmAPEvl~~---------~~ys~   66 (568)
                      |..||+||||||+|||++. +   .+||+|||+++....      ........||+.|+|||++.+         ..++.
T Consensus       147 H~~~i~H~dlkp~NIl~~~-~---~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~  222 (319)
T 2y4i_B          147 HAKGILHKDLKSKNVFYDN-G---KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSK  222 (319)
T ss_dssp             HHTTCCCCCCCSTTEEEC------CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCH
T ss_pred             HhCCccccCCChhhEEEeC-C---CEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCc
Confidence            4569999999999999983 3   589999999875431      122334568999999999864         35788


Q ss_pred             ccchhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           67 KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        67 ksDIWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ++|||||||++|+|++|+.||.+.........+........+   ...++..+.+++.+||..||.+|||+.++++
T Consensus       223 ~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          223 HSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLS---QIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCC---CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCC---cCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            999999999999999999999998887777666554332222   2356788999999999999999999999865

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.85  E-value=3.2e-22  Score=204.65  Aligned_cols=138  Identities=22%  Similarity=0.359  Sum_probs=103.3

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      .||+||||||+|||++.++   .+||+|||+++......  .....+||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       153 ~~ivH~Dlkp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~  229 (326)
T 3uim_A          153 PKIIHRDVKAANILLDEEF---EAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELI  229 (326)
T ss_dssp             SCEECCCCSGGGEEECTTC---CEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHH
T ss_pred             CCeEeCCCchhhEEECCCC---CEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHH
Confidence            3999999999999999876   69999999998765332  234466999999999998888999999999999999999


Q ss_pred             hCCCCCCCCc--------HHHHHHHHHhccC------CCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhch
Q 008370           82 TGKPPFDGSN--------QLQLFQNILTSTE------LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHR  144 (568)
Q Consensus        82 tG~~PF~g~~--------~~~~~~~Il~~~~------~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hp  144 (568)
                      +|+.||....        ..+..........      ...........+..+.+++.+||..||.+|||+.++++|-
T Consensus       230 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L  306 (326)
T 3uim_A          230 TGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML  306 (326)
T ss_dssp             HCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHH
T ss_pred             hCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHh
Confidence            9999995211        1111111111100      0111122233457899999999999999999999998773

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.85  E-value=3.7e-22  Score=207.35  Aligned_cols=141  Identities=12%  Similarity=0.180  Sum_probs=106.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--------CCccccCCCcccChhhhccCCCCcccchhhH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--------LADTLCGSPLYMAPEIIQNHKYDAKADLWSV   73 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--------~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSl   73 (568)
                      |..||+||||||+|||++.++ ...+||+|||+++.+....        ......||+.|+|||++.+..++.++|||||
T Consensus       176 H~~~ivH~Dikp~NIl~~~~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl  254 (352)
T 2jii_A          176 HENEYVHGNVTAENIFVDPED-QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSL  254 (352)
T ss_dssp             HHTTCBCSCCCGGGEEEETTE-EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHH
T ss_pred             HhCCccCCCCCHHHEEEcCCC-CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHH
Confidence            456999999999999999764 1269999999998764322        2234589999999999999899999999999


Q ss_pred             HHHHHHHHhCCCCCCCCc--HHHHHHHHH--hccCCCCCC--CcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           74 GAILFQLVTGKPPFDGSN--QLQLFQNIL--TSTELRFPP--GAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        74 GviL~ELltG~~PF~g~~--~~~~~~~Il--~~~~~~~p~--~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ||++|+|++|+.||.+..  .........  ......++.  ..+..+++.+.+|+.+||..||.+||+++++++.
T Consensus       255 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  330 (352)
T 2jii_A          255 GYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNN  330 (352)
T ss_dssp             HHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             HHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHH
Confidence            999999999999998753  222222111  111111111  1123568999999999999999999999999653

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.85  E-value=4.8e-22  Score=219.45  Aligned_cols=134  Identities=26%  Similarity=0.383  Sum_probs=112.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..+||||||||+|||++.++   .+||+|||+++......  ......++..|+|||++.+..|+.++|||||||++||
T Consensus       380 H~~~ivHrDlkp~NIll~~~~---~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~e  456 (535)
T 2h8h_A          380 ERMNYVHRDLRAANILVGENL---VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE  456 (535)
T ss_dssp             HHTTCCCSCCSGGGEEECGGG---CEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HhCCeeCCCCCHhhEEEcCCC---cEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence            456999999999999998776   79999999998765322  1223456788999999998899999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |++ |+.||.+....+.+..+........+    ..++..+.+||.+||..||.+|||++++++
T Consensus       457 l~t~g~~P~~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          457 LTTKGRVPYPGMVNREVLDQVERGYRMPCP----PECPESLHDLMCQCWRKEPEERPTFEYLQA  516 (535)
T ss_dssp             HTTTTCCSSTTCCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            999 99999999888888777655443333    367889999999999999999999999864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.85  E-value=5e-22  Score=200.49  Aligned_cols=134  Identities=22%  Similarity=0.367  Sum_probs=105.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......    ......||+.|+|||++.+..++.++||||+||++
T Consensus       143 H~~~i~H~dikp~Nil~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  219 (302)
T 4e5w_A          143 GSRQYVHRDLAARNVLVESEH---QVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTL  219 (302)
T ss_dssp             HHTTEECSCCSGGGEEEEETT---EEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred             hcCCcccCCCchheEEEcCCC---CEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHH
Confidence            457999999999999999877   79999999998775443    23456788889999999998999999999999999


Q ss_pred             HHHHhCCCCCCCC--------------cHH-HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVTGKPPFDGS--------------NQL-QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELltG~~PF~g~--------------~~~-~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |+|++|..|+...              ... .....+.......    .+..+++.+.+|+.+||..||.+|||+.++++
T Consensus       220 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          220 HELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLP----CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCC----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCC----CCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            9999999876421              111 2222222222222    23467899999999999999999999999864

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.85  E-value=8.7e-22  Score=200.90  Aligned_cols=136  Identities=21%  Similarity=0.322  Sum_probs=98.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++......  ......|++.|+|||++.+..++.++||||||+++|+
T Consensus       151 H~~~i~H~dlkp~NIl~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~  227 (309)
T 2h34_A          151 HAAGATHRDVKPENILVSADD---FAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYE  227 (309)
T ss_dssp             HHTTCCCSCCCGGGEEECTTS---CEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHH
T ss_pred             HHCcCCcCCCChHHEEEcCCC---CEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHH
Confidence            456999999999999999876   69999999998765432  2335679999999999998899999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-CHHHHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-TFKEFFN  142 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-TaeElL~  142 (568)
                      |++|+.||.+.+.......+...  ...+......+++.+.+++.+||..||.+|| +++++++
T Consensus       228 l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          228 CLTGSPPYQGDQLSVMGAHINQA--IPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             HHHSSCSSCSCHHHHHHHHHHSC--CCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             HHHCCCCCCCchHHHHHHHhccC--CCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence            99999999987765444333322  1222233456788999999999999999999 8888753

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.84  E-value=7.1e-22  Score=202.86  Aligned_cols=138  Identities=17%  Similarity=0.229  Sum_probs=102.7

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhccC------CCCcccchh
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQNH------KYDAKADLW   71 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~~------~ys~ksDIW   71 (568)
                      ..+|+||||||+|||++.++   .+||+|||+++......     .....+||+.|+|||++.+.      .++.++|||
T Consensus       165 ~~~ivH~Dlkp~NIll~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~  241 (342)
T 1b6c_B          165 KPAIAHRDLKSKNILVKKNG---TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY  241 (342)
T ss_dssp             BCEEECSCCSGGGEEECTTS---CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHH
T ss_pred             cCCeeeCCCCHHHEEECCCC---CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHH
Confidence            57899999999999998877   69999999998765433     23456899999999999765      233689999


Q ss_pred             hHHHHHHHHHhC----------CCCCCCCc-----HHHHHHHHHhcc-CCCCCCCc-ccccCHHHHHHHHHhhccCCCCC
Q 008370           72 SVGAILFQLVTG----------KPPFDGSN-----QLQLFQNILTST-ELRFPPGA-IEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        72 SlGviL~ELltG----------~~PF~g~~-----~~~~~~~Il~~~-~~~~p~~~-~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      ||||++|+|++|          ..||....     .......+.... ...++... .......+.+|+.+||..||.+|
T Consensus       242 slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~R  321 (342)
T 1b6c_B          242 AMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR  321 (342)
T ss_dssp             HHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGS
T ss_pred             HHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhC
Confidence            999999999999          78887642     223333332221 11122110 12344678999999999999999


Q ss_pred             CCHHHHHhc
Q 008370          135 ITFKEFFNH  143 (568)
Q Consensus       135 pTaeElL~H  143 (568)
                      ||++++++|
T Consensus       322 ps~~~i~~~  330 (342)
T 1b6c_B          322 LTALRIKKT  330 (342)
T ss_dssp             CCHHHHHHH
T ss_pred             CCHHHHHHH
Confidence            999999876

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.84  E-value=4.2e-22  Score=199.77  Aligned_cols=133  Identities=21%  Similarity=0.387  Sum_probs=102.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCC-----CcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVT-----PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~-----~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGv   75 (568)
                      |..+|+||||||+|||++.++..     +.+||+|||+++....   .....||+.|+|||++.+ ..++.++|||||||
T Consensus       130 H~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~  206 (289)
T 4fvq_A          130 EENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLP---KDILQERIPWVPPECIENPKNLNLATDKWSFGT  206 (289)
T ss_dssp             HHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSC---HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHH
T ss_pred             hhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccC---ccccCCcCcccCHHHhCCCCCCCchhHHHHHHH
Confidence            45699999999999999987631     2399999999865432   234568999999999987 67899999999999


Q ss_pred             HHHHHHhC-CCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           76 ILFQLVTG-KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        76 iL~ELltG-~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ++|+|++| .+||............. . ...++    ...++.+.+|+.+||..||.+|||++++++|
T Consensus       207 il~el~~g~~~~~~~~~~~~~~~~~~-~-~~~~~----~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          207 TLWEICSGGDKPLSALDSQRKLQFYE-D-RHQLP----APKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHHHHHTTTCCTTTTSCHHHHHHHHH-T-TCCCC----CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCCCccccchHHHHHHhh-c-cCCCC----CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            99999995 55665555544443332 2 22223    2446788999999999999999999999766

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.84  E-value=1.4e-21  Score=198.56  Aligned_cols=141  Identities=23%  Similarity=0.504  Sum_probs=99.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..||+||||||+||+++.++   .+||+|||+++...... ......|++.|+|||++.+..++.++|||||||++|+|
T Consensus       153 H~~~i~H~dl~p~NIl~~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l  229 (310)
T 2wqm_A          153 HSRRVMHRDIKPANVFITATG---VVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM  229 (310)
T ss_dssp             HHTTCCCCCCCGGGEEECTTS---CEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             hhCCeeCCCCcHHHEEEcCCC---CEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHH
Confidence            456999999999999998776   69999999998765332 23456789999999999999999999999999999999


Q ss_pred             HhCCCCCCCCc--HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           81 VTGKPPFDGSN--QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        81 ltG~~PF~g~~--~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++|..||.+..  .......+....   +++.....+++.+.+|+.+||..||.+||++.+++++  +..+.
T Consensus       230 ~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~--l~~l~  296 (310)
T 2wqm_A          230 AALQSPFYGDKMNLYSLCKKIEQCD---YPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV--AKRMH  296 (310)
T ss_dssp             HHSSCTTC---CCHHHHHHHHHTTC---SCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH--HHHHH
T ss_pred             HhCCCCCcccchhHHHHHHHhhccc---CCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHH--HHHHH
Confidence            99999997643  333444443322   2222234678899999999999999999999999754  44443

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.84  E-value=1.3e-21  Score=221.38  Aligned_cols=135  Identities=25%  Similarity=0.436  Sum_probs=111.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.......  .....||+.|+|||++.+..++.++|||||||++||
T Consensus       508 H~~givHrDikp~NILl~~~~---~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~e  584 (656)
T 2j0j_A          508 ESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE  584 (656)
T ss_dssp             HHTTCCCSCCSGGGEEEEETT---EEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             HhCCccccccchHhEEEeCCC---CEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHH
Confidence            456999999999999999877   799999999987654332  223456789999999998899999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++ |..||.+....+....+........+    ..+++.+.+||.+||..||.+||++.++++.
T Consensus       585 llt~g~~Pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~~l~~dP~~RPs~~el~~~  645 (656)
T 2j0j_A          585 ILMHGVKPFQGVKNNDVIGRIENGERLPMP----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  645 (656)
T ss_dssp             HHTTSCCTTTTCCHHHHHHHHHHTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCCCCCCCHHHHHHHHHcCCCCCCC----ccccHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            997 99999999888888777765444444    3678899999999999999999999999754

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.84  E-value=7.8e-22  Score=199.79  Aligned_cols=138  Identities=23%  Similarity=0.335  Sum_probs=103.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..||+||||||+||+++.++   .+||+|||+++......   ......||+.|+|||++.+ .++.++|||||||++|
T Consensus       150 H~~~i~H~dlkp~Nili~~~~---~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~  225 (307)
T 2nru_A          150 HENHHIHRDIKSANILLDEAF---TAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLL  225 (307)
T ss_dssp             HHTTEECSCCCGGGEEECTTC---CEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHH
T ss_pred             hcCCeecCCCCHHHEEEcCCC---cEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHH
Confidence            556999999999999998776   69999999998765322   2334679999999998865 4788999999999999


Q ss_pred             HHHhCCCCCCCCcHHHHH----HHHHhccC------CCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           79 QLVTGKPPFDGSNQLQLF----QNILTSTE------LRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~----~~Il~~~~------~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +|++|..||.+.......    ..+.....      ...........+..+.+++.+||..||.+||++.+++++
T Consensus       226 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          226 EIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            999999999875432211    11111100      000111223445778999999999999999999999765

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.84  E-value=1.1e-21  Score=200.92  Aligned_cols=142  Identities=20%  Similarity=0.321  Sum_probs=107.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..||+||||||+|||++.++   .+||+|||+++......    ......||+.|+|||++.+..++.++|||||||++
T Consensus       151 H~~~ivH~Dikp~Nil~~~~~---~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  227 (318)
T 3lxp_A          151 HAQHYIHRDLAARNVLLDNDR---LVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTL  227 (318)
T ss_dssp             HHTTEECSCCSGGGEEECTTC---CEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred             HhCCccCCCCchheEEEcCCC---CEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHH
Confidence            456999999999999998876   69999999998875433    23345688889999999998899999999999999


Q ss_pred             HHHHhCCCCCCCCcHH--------------HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVTGKPPFDGSNQL--------------QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~--------------~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |+|++|..||......              ......+...   .....+..+++.+.+||.+||..||.+|||++++++ 
T Consensus       228 ~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~-  303 (318)
T 3lxp_A          228 YELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERG---ERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIP-  303 (318)
T ss_dssp             HHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTT---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH-
T ss_pred             HHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcc---cCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHH-
Confidence            9999999999753211              0111122111   112223467899999999999999999999999974 


Q ss_pred             hhHHHhHH
Q 008370          144 RFLGELRQ  151 (568)
Q Consensus       144 pff~~~~~  151 (568)
                       ++..+..
T Consensus       304 -~L~~l~~  310 (318)
T 3lxp_A          304 -ILKTVHE  310 (318)
T ss_dssp             -HHHHHHH
T ss_pred             -HHHHHHH
Confidence             4555443

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.83  E-value=1.9e-21  Score=197.15  Aligned_cols=128  Identities=31%  Similarity=0.572  Sum_probs=94.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..||+||||||+|||++.++....+||+|||+++....                     ..|+.++||||+||++|+|+
T Consensus       134 H~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~---------------------~~~~~~~DiwslG~il~el~  192 (299)
T 3m2w_A          134 HSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG---------------------EKYDKSCDMWSLGVIMYILL  192 (299)
T ss_dssp             HHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT---------------------CGGGGHHHHHHHHHHHHHHH
T ss_pred             HhCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc---------------------ccCCchhhHHHHHHHHHHHH
Confidence            456999999999999999854344799999999876432                     34678899999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhc---cCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           82 TGKPPFDGSNQLQLFQNILTS---TELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~---~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +|..||.+.........+...   ....++...+..+++++.+|+.+||..||.+|||++|+++||||....
T Consensus       193 tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~  264 (299)
T 3m2w_A          193 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST  264 (299)
T ss_dssp             HSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGG
T ss_pred             HCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhcccc
Confidence            999999876544332211111   111222222246789999999999999999999999999999997643

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.83  E-value=3.1e-21  Score=201.33  Aligned_cols=135  Identities=11%  Similarity=0.169  Sum_probs=100.1

Q ss_pred             CCCCCeEecCCCCCCeEEec--------CCCCCcEEEeecccceecC---CCCCCccccCCCcccChhhhccCCCCcccc
Q 008370            1 MCYVFMIVSANACQNLLVST--------NEVTPVLKIGDFGFARSLT---PQDLADTLCGSPLYMAPEIIQNHKYDAKAD   69 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~--------~~~~~vvKL~DFGlAr~l~---~~~~~~t~~GT~~YmAPEvl~~~~ys~ksD   69 (568)
                      ||..|||||||||+|||++.        +...+.+||+|||+++.+.   ........+||+.|+|||++.+..|+.++|
T Consensus       188 lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  267 (365)
T 3e7e_A          188 VHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQID  267 (365)
T ss_dssp             HHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHH
T ss_pred             HhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCcccc
Confidence            35679999999999999987        1112379999999997653   233445678999999999999999999999


Q ss_pred             hhhHHHHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhch
Q 008370           70 LWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHR  144 (568)
Q Consensus        70 IWSlGviL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hp  144 (568)
                      ||||||++|+|++|+.||.......      ......++..   .....+.+++.+||..+|.+|++..+.+.+.
T Consensus       268 iwslG~il~elltg~~pf~~~~~~~------~~~~~~~~~~---~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~  333 (365)
T 3e7e_A          268 YFGVAATVYCMLFGTYMKVKNEGGE------CKPEGLFRRL---PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQK  333 (365)
T ss_dssp             HHHHHHHHHHHHHSSCCCEEEETTE------EEECSCCTTC---SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCccccCCCCc------eeechhcccc---CcHHHHHHHHHHHcCCCCCCcchHHHHHHHH
Confidence            9999999999999999996543210      0001111111   2356788999999999999996654444443

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.83  E-value=9.9e-22  Score=199.92  Aligned_cols=135  Identities=17%  Similarity=0.240  Sum_probs=101.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC----------CccccCCCcccChhhhccCC---CCccc
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL----------ADTLCGSPLYMAPEIIQNHK---YDAKA   68 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~----------~~t~~GT~~YmAPEvl~~~~---ys~ks   68 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++.......          .....||+.|+|||++.+..   ++.++
T Consensus       151 H~~~ivH~dlkp~NIl~~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  227 (317)
T 2buj_A          151 HAKGYAHRDLKPTNILLGDEG---QPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERT  227 (317)
T ss_dssp             HHTTEECCCCCGGGEEECTTS---CEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHH
T ss_pred             HhCCcccCCCCHHHEEEcCCC---CEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchh
Confidence            456999999999999998876   699999999876542110          12346799999999987553   68899


Q ss_pred             chhhHHHHHHHHHhCCCCCCCCcHH--HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           69 DLWSVGAILFQLVTGKPPFDGSNQL--QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        69 DIWSlGviL~ELltG~~PF~g~~~~--~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |||||||++|+|++|+.||......  .....+..  ...++.  ...+++.+.+||.+||..||.+||++++++++
T Consensus       228 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          228 DVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN--QLSIPQ--SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             HHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHC--C--CCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhc--cCCCCc--cccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            9999999999999999999542110  11111221  222222  23678899999999999999999999999876

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.82  E-value=4.4e-21  Score=196.93  Aligned_cols=135  Identities=21%  Similarity=0.308  Sum_probs=104.3

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC----CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL----ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~----~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.......    .....++..|+|||++.+..++.++|||||||++
T Consensus       162 H~~~ivH~dikp~NIli~~~~---~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  238 (326)
T 2w1i_A          162 GTKRYIHRDLATRNILVENEN---RVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVL  238 (326)
T ss_dssp             HHTTEECSCCCGGGEEEEETT---EEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred             HhCCEeccCCCcceEEEcCCC---cEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHH
Confidence            456999999999999999877   799999999988654332    2334577789999999988899999999999999


Q ss_pred             HHHHhCCCCCCCCcHH----------------HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           78 FQLVTGKPPFDGSNQL----------------QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~----------------~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      |+|++|..||......                .....+.......    .+..+++.+.+||.+||..||.+||++.+++
T Consensus       239 ~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~Rps~~el~  314 (326)
T 2w1i_A          239 YELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLP----RPDGCPDEIYMIMTECWNNNVNQRPSFRDLA  314 (326)
T ss_dssp             HHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCC----CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             HHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCC----CCCcccHHHHHHHHHHcCCChhhCcCHHHHH
Confidence            9999999998642110                1111122221222    2346789999999999999999999999996


Q ss_pred             hc
Q 008370          142 NH  143 (568)
Q Consensus       142 ~H  143 (568)
                      +.
T Consensus       315 ~~  316 (326)
T 2w1i_A          315 LR  316 (326)
T ss_dssp             HH
T ss_pred             HH
Confidence            53

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.81  E-value=2.6e-21  Score=199.47  Aligned_cols=135  Identities=11%  Similarity=0.146  Sum_probs=101.5

Q ss_pred             CCCeEecCCCCCCeEEecCCC-----------------CCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCC
Q 008370            3 YVFMIVSANACQNLLVSTNEV-----------------TPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYD   65 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~-----------------~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys   65 (568)
                      ..+||||||||+|||++.++.                 ...+||+|||+|+....    ...+||+.|+|||++.+.. +
T Consensus       180 ~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~----~~~~gt~~y~aPE~~~g~~-~  254 (336)
T 2vuw_A          180 SLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD----GIVVFCDVSMDEDLFTGDG-D  254 (336)
T ss_dssp             HHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET----TEEECCCCTTCSGGGCCCS-S
T ss_pred             hCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC----CcEEEeecccChhhhcCCC-c
Confidence            568999999999999998751                 12699999999987653    2458999999999998776 8


Q ss_pred             cccchhhHHHH-HHHHHhCCCCCCCCcH-HHHHHHHHhccCC--CCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           66 AKADLWSVGAI-LFQLVTGKPPFDGSNQ-LQLFQNILTSTEL--RFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        66 ~ksDIWSlGvi-L~ELltG~~PF~g~~~-~~~~~~Il~~~~~--~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      .++||||+|++ .++++.|..||.+... ......+......  ..+...+..+++++.+||.+||..|     |++|++
T Consensus       255 ~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          255 YQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred             cceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence            89999998777 7788899999954321 1222333322211  1122223457889999999999976     999999


Q ss_pred             -hchhHH
Q 008370          142 -NHRFLG  147 (568)
Q Consensus       142 -~Hpff~  147 (568)
                       +||||+
T Consensus       330 ~~Hp~f~  336 (336)
T 2vuw_A          330 CQHSLFK  336 (336)
T ss_dssp             HHCGGGC
T ss_pred             hcCCCcC
Confidence             999984

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.78  E-value=8.7e-20  Score=206.81  Aligned_cols=131  Identities=22%  Similarity=0.339  Sum_probs=105.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..|||||||||+|||++.+    .+||+|||+++.....   ...+||+.|+|||++.+. ++.++|||||||++|+|+
T Consensus       199 H~~giiHrDlkp~NIll~~~----~~kl~DFG~a~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~  270 (681)
T 2pzi_A          199 HSIGLVYNDLKPENIMLTEE----QLKLIDLGAVSRINSF---GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALT  270 (681)
T ss_dssp             HHTTEECCCCSGGGEEECSS----CEEECCCTTCEETTCC---SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHH
T ss_pred             HHCCCeecccChHHeEEeCC----cEEEEecccchhcccC---CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHH
Confidence            55799999999999999874    5899999999886543   456899999999998765 488999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCC-CcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhHHh
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPP-GAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQT  152 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~-~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~~~  152 (568)
                      +|.+||.+....            ..+. ......++.+.+||.+||..||.+||+..+.+.|+|+..++..
T Consensus       271 ~g~~~~~~~~~~------------~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~  330 (681)
T 2pzi_A          271 LDLPTRNGRYVD------------GLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV  330 (681)
T ss_dssp             SCCCEETTEECS------------SCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred             hCCCCCcccccc------------cccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence            999998753210            1111 1112346789999999999999999999999999998766544

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.62  E-value=4.7e-17  Score=165.03  Aligned_cols=113  Identities=12%  Similarity=0.078  Sum_probs=82.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++   .+||+++|                   |++|       ++.++|||||||++|+|
T Consensus       145 lH~~givH~Dikp~NIll~~~g---~~kl~~~~-------------------~~~~-------~~~~~Di~slG~il~el  195 (286)
T 3uqc_A          145 AHRAGVALSIDHPSRVRVSIDG---DVVLAYPA-------------------TMPD-------ANPQDDIRGIGASLYAL  195 (286)
T ss_dssp             HHHTTCCCCCCSGGGEEEETTS---CEEECSCC-------------------CCTT-------CCHHHHHHHHHHHHHHH
T ss_pred             HHHCCCccCCCCcccEEEcCCC---CEEEEecc-------------------ccCC-------CCchhHHHHHHHHHHHH
Confidence            3557999999999999999877   68988544                   3333       78899999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhc--cCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           81 VTGKPPFDGSNQLQLFQNILTS--TELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~--~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ++|+.||.+.+....+......  .....+......+++.+.+||.+||..||.+| |+.|+++.
T Consensus       196 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          196 LVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             HHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred             HHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence            9999999886543211000000  01111112234678899999999999999999 99999653

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.49  E-value=5.4e-16  Score=172.67  Aligned_cols=126  Identities=11%  Similarity=0.034  Sum_probs=75.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..|||||||||+||||+.++   .+||+|||+|+..... ....+.+||+.|||||++.+. +...+|+|++|++++++
T Consensus       356 H~~GIIHRDIKPeNILL~~dg---~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l  431 (569)
T 4azs_A          356 EKQGFWHDDVRPWNVMVDARQ---HARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNL  431 (569)
T ss_dssp             HHTTCEESCCCGGGEEECTTS---CEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------CCC
T ss_pred             HHCCceeccCchHhEEECCCC---CEEEeecccCeeCCCCCccccCceechhhccHHHhCCC-CCCcccccccccchhhh
Confidence            567999999999999999887   6999999999876543 345678999999999998764 56779999999998887


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      .++..+|        ...+...     +..     ...+..+...+...+|..|+.......|+|....
T Consensus       432 ~~~~~~~--------~~~l~~~-----~~~-----~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  482 (569)
T 4azs_A          432 PQPWSNW--------LYAVWQE-----PVE-----RWNFVLLLALFEKKAKLPSAEQQRGATEQWIIAQ  482 (569)
T ss_dssp             CTTHHHH--------HHHHHTS-----CGG-----GCSHHHHHHHHHTGGGSCCGGGSSCCHHHHHHHH
T ss_pred             ccccchh--------HHHhhcC-----CCC-----CCcHHHHHHHHhCCCCCCCCChhhhccchhHHHH
Confidence            6654332        1111111     110     1123456666777788888777766677776443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.04  E-value=1.2e-11  Score=136.75  Aligned_cols=83  Identities=17%  Similarity=0.187  Sum_probs=68.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--------CccccCCCcccChhhhcc--CCCCcccch
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--------ADTLCGSPLYMAPEIIQN--HKYDAKADL   70 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--------~~t~~GT~~YmAPEvl~~--~~ys~ksDI   70 (568)
                      ||..+|+||||||+|||++.     .+||+|||+++.......        ..+.+||+.|||||++..  ..|+..+|+
T Consensus       447 LH~~gIiHrDiKp~NILl~~-----~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~  521 (540)
T 3en9_A          447 LHKNDVIHNDLTTSNFIFDK-----DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDR  521 (540)
T ss_dssp             HHHTTEECTTCCTTSEEESS-----SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTT
T ss_pred             HHHCcCccCCCCHHHEEECC-----eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhH
Confidence            35679999999999999987     499999999998765321        246789999999999976  678888999


Q ss_pred             hhHHHHHHHHHhCCCCCC
Q 008370           71 WSVGAILFQLVTGKPPFD   88 (568)
Q Consensus        71 WSlGviL~ELltG~~PF~   88 (568)
                      |+..+-..+.+.++.+|.
T Consensus       522 ws~vl~~l~~v~~r~rY~  539 (540)
T 3en9_A          522 WEIILELMKDVERRARYV  539 (540)
T ss_dssp             HHHHHHHHHHHHTCSCCC
T ss_pred             HHHHHHHHHHHHhccccC
Confidence            999998888887777663

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.45  E-value=3.2e-08  Score=100.13  Aligned_cols=44  Identities=23%  Similarity=0.058  Sum_probs=36.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ   60 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~   60 (568)
                      ||..||+||||||+|||++ ++   .+||+|||+|+.            +..|+|||++.
T Consensus       209 lH~~giiHrDlkp~NILl~-~~---~vkl~DFG~a~~------------~~~~~a~e~l~  252 (282)
T 1zar_A          209 FYHRGIVHGDLSQYNVLVS-EE---GIWIIDFPQSVE------------VGEEGWREILE  252 (282)
T ss_dssp             HHHTTEECSCCSTTSEEEE-TT---EEEECCCTTCEE------------TTSTTHHHHHH
T ss_pred             HHHCCCEeCCCCHHHEEEE-CC---cEEEEECCCCeE------------CCCCCHHHHHH
Confidence            3567999999999999999 55   799999999864            34578999874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.75  E-value=9.6e-06  Score=80.43  Aligned_cols=31  Identities=16%  Similarity=0.097  Sum_probs=27.9

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceec
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSL   38 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l   38 (568)
                      ..|||||||||.|||++.     .+||+|||+|...
T Consensus       189 ~~givHrDlkp~NILl~~-----~~~liDFG~a~~~  219 (258)
T 1zth_A          189 EAELVHADLSEYNIMYID-----KVYFIDMGQAVTL  219 (258)
T ss_dssp             TSCEECSSCSTTSEEESS-----SEEECCCTTCEET
T ss_pred             HCCEEeCCCCHHHEEEcC-----cEEEEECcccccC
Confidence            679999999999999986     3899999999764

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=96.13  E-value=0.0014  Score=69.48  Aligned_cols=37  Identities=16%  Similarity=-0.009  Sum_probs=29.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCC-------CcEEEeeccccee
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVT-------PVLKIGDFGFARS   37 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~-------~vvKL~DFGlAr~   37 (568)
                      ||..|||||||||.|||++.++..       ..+.|+||+-+..
T Consensus       221 lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          221 LAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             HHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             HHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            456799999999999999987521       1378999997755

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=96.03  E-value=0.0012  Score=66.33  Aligned_cols=81  Identities=20%  Similarity=0.275  Sum_probs=50.1

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcc---cChhhhc----c-CC---------CCc
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLY---MAPEIIQ----N-HK---------YDA   66 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~Y---mAPEvl~----~-~~---------ys~   66 (568)
                      +.++|+|++|.||+++.+. ...+.|+||+.+........   ......+   ..|+...    . ..         ...
T Consensus       191 ~~~~HgD~~~~N~l~~~~~-~~~~~~iD~~~~~~~~~~~D---l~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~  266 (304)
T 3sg8_A          191 PCLIHNDFSSDHILFDTEK-NTICGIIDFGDAAISDPDND---FISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRM  266 (304)
T ss_dssp             CEEECSCCCGGGEEEETTT-TEEEEECCCTTCEEECTTHH---HHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHH
T ss_pred             ceeEeCCCCcccEEEeCCC-CCEEEEEeCCCCccCChHHH---HHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHHH
Confidence            4689999999999999741 12689999999876432110   0000011   2222211    0 00         011


Q ss_pred             ccchhhHHHHHHHHHhCCCCCC
Q 008370           67 KADLWSVGAILFQLVTGKPPFD   88 (568)
Q Consensus        67 ksDIWSlGviL~ELltG~~PF~   88 (568)
                      ..+.|++|.++|.+.+|..+|.
T Consensus       267 ~~~~~~l~~~~~~~~~g~~~~~  288 (304)
T 3sg8_A          267 KEKYWSFEKIIYGKEYGYMDWY  288 (304)
T ss_dssp             HHHHHHHHHHHHHHHTTCHHHH
T ss_pred             HHHHHHHHHHHHHHHcCCHHHH
Confidence            2578999999999999988763

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=94.98  E-value=0.0068  Score=58.26  Aligned_cols=30  Identities=13%  Similarity=0.108  Sum_probs=25.3

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      +++|||++|.|||++.++   .++|+|||.+..
T Consensus       185 ~l~HgDl~~~Nil~~~~~---~~~liD~~~a~~  214 (264)
T 1nd4_A          185 VVTHGDACLPNIMVENGR---FSGFIDCGRLGV  214 (264)
T ss_dssp             EEECSSCCGGGEEEETTE---EEEECCCTTCEE
T ss_pred             EEECCCCCCCcEEEECCc---EEEEEcchhccc
Confidence            599999999999997654   567999998754

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=93.07  E-value=0.039  Score=53.60  Aligned_cols=31  Identities=16%  Similarity=0.160  Sum_probs=25.4

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      ..++|||++|.|||++.+.   .+.|+||+.+..
T Consensus       183 ~~l~HgDl~~~Nil~~~~~---~~~lIDwe~a~~  213 (263)
T 3tm0_A          183 LVFSHGDLGDSNIFVKDGK---VSGFIDLGRSGR  213 (263)
T ss_dssp             EEEECSSCCTTSEEEETTE---EEEECCCTTCEE
T ss_pred             ceEECCCCCcCcEEEECCc---EEEEEEchhccc
Confidence            4699999999999997643   567999997743

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=92.76  E-value=0.041  Score=56.35  Aligned_cols=34  Identities=18%  Similarity=0.197  Sum_probs=28.2

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceec
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSL   38 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l   38 (568)
                      .+++|||+++.|||++.++. .++.|+||+.+...
T Consensus       216 ~~lvHgD~~~~Nil~~~~~~-~v~~viDwe~a~~g  249 (359)
T 3dxp_A          216 TSIVHGDYRLDNLMFHPTEP-RVLAVLDWELSTLG  249 (359)
T ss_dssp             CEEECSSCSGGGEEECSSSS-CEEEECCCTTCEEE
T ss_pred             ceEEeCCCCCCcEEEeCCCC-cEEEEECccccccC
Confidence            57999999999999987642 35799999998753

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=90.90  E-value=0.12  Score=51.72  Aligned_cols=31  Identities=16%  Similarity=0.071  Sum_probs=26.5

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      .+++|||+++.|||++.++   .+.|+||+.+..
T Consensus       222 ~~l~HgD~~~~Nil~~~~~---~~~lIDfe~a~~  252 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLGENE---QIWVIDLDTVSF  252 (346)
T ss_dssp             CCEECSSCSTTSEEECGGG---CEEECCCTTCEE
T ss_pred             CceecCCCCcccEEEeCCC---cEEEEehhhccc
Confidence            5799999999999997654   589999998754

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=88.06  E-value=0.19  Score=52.83  Aligned_cols=32  Identities=13%  Similarity=0.043  Sum_probs=27.1

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceec
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSL   38 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l   38 (568)
                      ...++|||+++.||+++.++    ++|+||+.+...
T Consensus       231 ~~~liHGDl~~~Nil~~~~~----~~lID~e~a~~G  262 (420)
T 2pyw_A          231 AQALIHGDLHTGSVMVTQDS----TQVIDPEFSFYG  262 (420)
T ss_dssp             CCEEECSCCSGGGEEECSSC----EEECCCTTCEEE
T ss_pred             CCeEEecCCCCCcEEEeCCC----CEEEeCcccccC
Confidence            35799999999999998654    899999998753

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=87.12  E-value=0.19  Score=50.17  Aligned_cols=31  Identities=23%  Similarity=0.169  Sum_probs=25.6

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      .+++|+|+.+.|||++.++   .+.|+||+.+..
T Consensus       187 ~~liHgDl~~~Nil~~~~~---~~~lIDf~~a~~  217 (322)
T 2ppq_A          187 AGVIHADLFQDNVFFLGDE---LSGLIDFYFACN  217 (322)
T ss_dssp             EEEECSCCCGGGEEEETTE---EEEECCCTTCEE
T ss_pred             cccCCCCCCccCEEEeCCc---eEEEecchhccC
Confidence            4689999999999998754   457999997753

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=86.50  E-value=0.33  Score=47.00  Aligned_cols=30  Identities=13%  Similarity=0.143  Sum_probs=25.1

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      .++|+|+.+.|||++.++   ++-|+||+.+..
T Consensus       194 ~l~HGDl~~~Nil~~~~~---~~~viDwe~a~~  223 (272)
T 4gkh_A          194 VVTHGDFSLDNLIFDEGK---LIGCIDVGRVGI  223 (272)
T ss_dssp             EEECSCCCTTSEEEETTE---EEEECCCTTCEE
T ss_pred             EEEcCCCCCCeEEEECCe---EEEEEECccccc
Confidence            489999999999998654   567999998754

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=85.73  E-value=0.26  Score=50.04  Aligned_cols=32  Identities=9%  Similarity=0.091  Sum_probs=26.2

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      ...++|+|+.+.|||++.+.   ++.|+||+.+..
T Consensus       221 ~~~l~HgDl~~~Nil~~~~~---~~~vIDwe~a~~  252 (357)
T 3ats_A          221 EPVLLWGDARVGNVLYRDFQ---PVAVLDWEMVAL  252 (357)
T ss_dssp             CCEEECSSCSGGGEEEETTE---EEEECCGGGCEE
T ss_pred             CceEEeCCCCCCeEEEeCCc---EEEEEccccccc
Confidence            35799999999999998432   578999998754

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=85.44  E-value=0.31  Score=48.88  Aligned_cols=34  Identities=29%  Similarity=0.270  Sum_probs=26.2

Q ss_pred             CCeEecCCCCCCeEEecCCC-CCcEEEeeccccee
Q 008370            4 VFMIVSANACQNLLVSTNEV-TPVLKIGDFGFARS   37 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~-~~vvKL~DFGlAr~   37 (568)
                      ..++|+|+++.|||++.+.. ..++.|+||+.+..
T Consensus       190 ~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~  224 (306)
T 3tdw_A          190 PRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI  224 (306)
T ss_dssp             CEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred             CeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence            46899999999999987211 12568999998865

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=82.77  E-value=0.44  Score=47.96  Aligned_cols=35  Identities=20%  Similarity=0.106  Sum_probs=27.3

Q ss_pred             CCeEecCCCCCCeEEecCCC-CCcEEEeecccceec
Q 008370            4 VFMIVSANACQNLLVSTNEV-TPVLKIGDFGFARSL   38 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~-~~vvKL~DFGlAr~l   38 (568)
                      ..++|||+.+.||+++.+.. ...+.|+||+.+...
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G  218 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG  218 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred             CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence            46999999999999986411 126899999998754

>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1

Probab=81.04  E-value=7.4  Score=33.79  Aligned_cols=72  Identities=22%  Similarity=0.279  Sum_probs=49.7

Q ss_pred             CCCCCCCcH-HHHHHHHHHhhhhhhHHHHhhcccchhHHHHHHHHHHHHHHHhhcccCCCCCCCCCChhhHHHHHHHHHH
Q 008370          466 DGAAEMPDA-MEIIYQRALSVGKIGAVEEYMGNKASASALYSKAMLLLSFIVGEAASLSLYPPFSLNPSDKKRIQGYINN  544 (568)
Q Consensus       466 ~~~~~mpda-~e~ifq~aL~~gr~~av~El~~~~~~~~~~Y~~a~~lL~fll~e~~~l~~np~~~l~~~d~~r~~~~i~~  544 (568)
                      .+...|+.. .  +.++|..+.+.|--.+-.|+-..|..+|..|+-+|.-++...+         .++..|+.|+.-+..
T Consensus         3 ~~~~~m~~~~~--~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~alk~e~---------~~~~~k~~lr~K~~e   71 (117)
T 2cpt_A            3 SGSSGMSSTSP--NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEA---------QGDKAKQSIRAKCTE   71 (117)
T ss_dssp             CCCCCSCCCCH--HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTSC---------CCHHHHHHHHHHHHH
T ss_pred             CCcccCCccHH--HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcc---------CCHHHHHHHHHHHHH
Confidence            456677743 2  6788999888887667778889999999999998887775420         244556655554443


Q ss_pred             Hhhh
Q 008370          545 LQSH  548 (568)
Q Consensus       545 l~~r  548 (568)
                      .-.|
T Consensus        72 Yl~R   75 (117)
T 2cpt_A           72 YLDR   75 (117)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            3333

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	568
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-35
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	4e-35
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	6e-34
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	8e-34
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-33
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	1e-32
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-32
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	2e-31
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	5e-31
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-30
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-30
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	5e-30
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	5e-30
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-29
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	9e-28
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	8e-27
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-26
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-26
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	5e-26
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	8e-26
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	2e-25
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	2e-25
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	4e-24
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-24
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	9e-24
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-23
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-23
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	3e-23
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	3e-23
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-23
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	1e-22
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	2e-22
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-22
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	3e-22
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	3e-22
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	8e-22
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	9e-22
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	1e-21
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	3e-21
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	5e-21
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	7e-21
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-20
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-20
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	2e-20
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	4e-20
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	5e-20
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	7e-20
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-19
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	1e-19
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-19
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	3e-19
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	4e-19
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	5e-19
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-18
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	2e-18
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-18
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-18
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	7e-18
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-17
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-15
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	7e-15
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-14

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  132 bits (332), Expect = 4e-35
 Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 1/166 (0%)

Query: 1   MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ 60
           +  + ++      +NLL  + +    + I DFG ++   P  +  T CG+P Y+APE++ 
Sbjct: 123 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLA 182

Query: 61  NHKYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCV 120
              Y    D WS+G I + L+ G PPF   N  +LF+ IL   E  F     +++     
Sbjct: 183 QKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQIL-KAEYEFDSPYWDDISDSAK 241

Query: 121 DLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKP 166
           D  R L+ ++P +R T ++   H ++            SV  + K 
Sbjct: 242 DFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKK 287

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  133 bits (335), Expect = 4e-35
 Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 4/184 (2%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
            +N++ +T   +  LK+ DFG    L P+       G+  + APE+ +        D+WS
Sbjct: 152 PENIMFTTKR-SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWS 210

Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           VG + + L++G  PF G N  +  +N+  S +      A   +  D  D  R LL  +P 
Sbjct: 211 VGVLSYILLSGLSPFGGENDDETLRNVK-SCDWNMDDSAFSGISEDGKDFIRKLLLADPN 269

Query: 133 ERITFKEFFNHRFLGELRQTVHAEQ--HSVVPETKPMVELLNSSTPEDRHSLHSEHPTNS 190
            R+T  +   H +L          Q   S   + +  ++    + PE    L      +S
Sbjct: 270 TRMTIHQALEHPWLTPGNAPGRDSQIPSSRYTKIRDSIKTKYDAWPEPLPPLGRISNYSS 329

Query: 191 SSKN 194
             K+
Sbjct: 330 LRKH 333

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (320), Expect = 6e-34
 Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+ +      LKI DFG++    P     TLCG+  Y+ PE+I+   +D K DLWS+
Sbjct: 135 ENLLLGSA---GELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSL 190

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G + ++ + GKPPF+ +   + ++ I    E  FP      +     DL   LL+ NP +
Sbjct: 191 GVLCYEFLVGKPPFEANTYQETYKRIS-RVEFTFPD----FVTEGARDLISRLLKHNPSQ 245

Query: 134 RITFKEFFNHRFL 146
           R   +E   H ++
Sbjct: 246 RPMLREVLEHPWI 258

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (323), Expect = 8e-34
 Identities = 46/190 (24%), Positives = 82/190 (43%), Gaps = 5/190 (2%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
            +N++  T   +  +KI +FG AR L P D    L  +P Y APE+ Q+       D+WS
Sbjct: 130 PENIIYQTRR-SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWS 188

Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           +G +++ L++G  PF      Q+ +NI+ + E  F   A +E+  + +D    LL +   
Sbjct: 189 LGTLVYVLLSGINPFLAETNQQIIENIM-NAEYTFDEEAFKEISIEAMDFVDRLLVKERK 247

Query: 133 ERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSS 192
            R+T  E   H +   L+Q +      V+   K           +    + +   +   +
Sbjct: 248 SRMTASEALQHPW---LKQKIERVSTKVIRTLKHRRYYHTLIKKDLNMVVSAARISCGGA 304

Query: 193 KNPKSACSSA 202
              +   S A
Sbjct: 305 IRSQKGVSVA 314

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  128 bits (322), Expect = 2e-33
 Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 8/185 (4%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
            +N++  T +    +KI DFG A  L P ++      +  + APEI+         D+W+
Sbjct: 155 PENIMCETKK-ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWA 213

Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           +G + + L++G  PF G + L+  QN+    +  F   A   + P+  D  + LL++ P 
Sbjct: 214 IGVLGYVLLSGLSPFAGEDDLETLQNVK-RCDWEFDEDAFSSVSPEAKDFIKNLLQKEPR 272

Query: 133 ERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNSSS 192
           +R+T  +   H +L    +  H+   S +P ++     +     E      +  P     
Sbjct: 273 KRLTVHDALEHPWL----KGDHSNLTSRIPSSR--YNKIRQKIKEKYADWPAPQPAIGRI 326

Query: 193 KNPKS 197
            N  S
Sbjct: 327 ANFSS 331

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  124 bits (312), Expect = 1e-32
 Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 8/133 (6%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           N+ +   +    +K+GDFG AR L      A    G+P YM+PE +    Y+ K+D+WS+
Sbjct: 144 NVFLDGKQN---VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSL 200

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +L++L    PPF   +Q +L   I      R P         +  ++   +L      
Sbjct: 201 GCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY----RYSDELNEIITRMLNLKDYH 256

Query: 134 RITFKEFFNHRFL 146
           R + +E   +  +
Sbjct: 257 RPSVEEILENPLI 269

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (311), Expect = 1e-32
 Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 8/135 (5%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           C N+ ++    T  +KIGD G A  L     A  + G+P +MAPE+ +  KYD   D+++
Sbjct: 142 CDNIFITGP--TGSVKIGDLGLAT-LKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYA 197

Query: 73  VGAILFQLVTGKPPFDGS-NQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G  + ++ T + P+    N  Q+++ +        P    +   P+  ++    +RQN 
Sbjct: 198 FGMCMLEMATSEYPYSECQNAAQIYRRVT---SGVKPASFDKVAIPEVKEIIEGCIRQNK 254

Query: 132 VERITFKEFFNHRFL 146
            ER + K+  NH F 
Sbjct: 255 DERYSIKDLLNHAFF 269

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (303), Expect = 2e-31
 Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 1/131 (0%)

Query: 16  LLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGA 75
           +L+  N   P +KI DFG A  +   +    + G+P ++APEI+       +AD+WS+G 
Sbjct: 145 MLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGV 204

Query: 76  ILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI 135
           I + L++G  PF G  + +   N+  +    F             D  R LL ++P +R+
Sbjct: 205 ITYILLSGASPFLGDTKQETLANVS-AVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRM 263

Query: 136 TFKEFFNHRFL 146
           T ++   H ++
Sbjct: 264 TIQDSLQHPWI 274

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 5e-31
 Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 12/186 (6%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL ++     +LK+ DFGFA+  T  +   T C +P Y+APE++   KYD   D+WS+
Sbjct: 140 ENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSL 199

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILT---STELRFPPGAIEELHPDCVDLCRCLLRQN 130
           G I++ L+ G PPF  ++ L +   + T     +  FP     E+  +   L R LL+  
Sbjct: 200 GVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTE 259

Query: 131 PVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPTNS 190
           P +R+T  EF NH ++          Q + VP+T      +     E    +  E  +  
Sbjct: 260 PTQRMTITEFMNHPWI---------MQSTKVPQTPLHTSRVLKEDKERWEDVKEEMTSAL 310

Query: 191 SSKNPK 196
           ++    
Sbjct: 311 ATMRVD 316

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (298), Expect = 1e-30
 Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 11/139 (7%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNH-----KYDAK 67
            N+L + +     +K+ DFG +   T      D+  G+P +MAPE++         YD K
Sbjct: 139 GNILFTLD---GDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 195

Query: 68  ADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           AD+WS+G  L ++   +PP    N +++   I  S               +  D  +  L
Sbjct: 196 ADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQ--PSRWSSNFKDFLKKCL 253

Query: 128 RQNPVERITFKEFFNHRFL 146
            +N   R T  +   H F+
Sbjct: 254 EKNVDARWTTSQLLQHPFV 272

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (296), Expect = 2e-30
 Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 6/134 (4%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLT-PQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
            N+L+  +     +K+ DFGF   +T  Q    T+ G+P +MAPE++    Y  K D+WS
Sbjct: 145 DNILLGMDGS---VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWS 201

Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           +G +  +++ G+PP+   N L+    I T+          E+L     D     L  +  
Sbjct: 202 LGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQN--PEKLSAIFRDFLNRCLDMDVE 259

Query: 133 ERITFKEFFNHRFL 146
           +R + KE   H+FL
Sbjct: 260 KRGSAKELLQHQFL 273

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  117 bits (293), Expect = 5e-30
 Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 10/139 (7%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ------NHKYDAK 67
           +N+L+  +     +K+ DFGF+  L P +    +CG+P Y+APEII+      +  Y  +
Sbjct: 139 ENILLDDD---MNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKE 195

Query: 68  ADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
            D+WS G I++ L+ G PPF    Q+ + + I+ S   +F     ++      DL    L
Sbjct: 196 VDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM-SGNYQFGSPEWDDYSDTVKDLVSRFL 254

Query: 128 RQNPVERITFKEFFNHRFL 146
              P +R T +E   H F 
Sbjct: 255 VVQPQKRYTAEEALAHPFF 273

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  117 bits (295), Expect = 5e-30
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 14/164 (8%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH---KYDAKAD 69
             N+L+S   +   +K+GDFG A  + P   A++  G+P +MAPE+I      +YD K D
Sbjct: 143 AGNILLSEPGL---VKLGDFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVD 196

Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           +WS+G    +L   KPP    N +    +I  +       G          +     L++
Sbjct: 197 VWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSG---HWSEYFRNFVDSCLQK 253

Query: 130 NPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNS 173
            P +R T +    HRF+  LR+        ++  TK  V  L++
Sbjct: 254 IPQDRPTSEVLLKHRFV--LRERPPTVIMDLIQRTKDAVRELDN 295

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 1e-29
 Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 11/137 (8%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKAD 69
            +N+L++ +     ++I DFG A+ L+P+     A++  G+  Y++PE++        +D
Sbjct: 136 PENILLNED---MHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSD 192

Query: 70  LWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           LW++G I++QLV G PPF   N+  +FQ I+   E  FP    E+  P   DL   LL  
Sbjct: 193 LWALGCIIYQLVAGLPPFRAGNEYLIFQKII-KLEYDFP----EKFFPKARDLVEKLLVL 247

Query: 130 NPVERITFKEFFNHRFL 146
           +  +R+  +E   +  L
Sbjct: 248 DATKRLGCEEMEGYGPL 264

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (276), Expect = 9e-28
 Identities = 35/138 (25%), Positives = 65/138 (47%), Gaps = 9/138 (6%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTP---QDLADTLCGSPLYMAPEIIQNHKYDA-KA 68
            +NLL+   +    LKI DFG A        + L + +CG+  Y+APE+++  ++ A   
Sbjct: 131 PENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPV 187

Query: 69  DLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           D+WS G +L  ++ G+ P+D  +      +     +    P   +++    + L   +L 
Sbjct: 188 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNP--WKKIDSAPLALLHKILV 245

Query: 129 QNPVERITFKEFFNHRFL 146
           +NP  RIT  +    R+ 
Sbjct: 246 ENPSARITIPDIKKDRWY 263

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  108 bits (271), Expect = 8e-27
 Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 16/161 (9%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+L+  N     +KI DFGFA+ +   D+  TLCG+P Y+APE++    Y+   D WS 
Sbjct: 133 ENILLDKN---GHIKITDFGFAKYV--PDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSF 187

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G ++++++ G  PF  SN ++ ++ IL + ELRFPP      + D  DL   L+ ++  +
Sbjct: 188 GILIYEMLAGYTPFYDSNTMKTYEKILNA-ELRFPP----FFNEDVKDLLSRLITRDLSQ 242

Query: 134 RI-----TFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVE 169
           R+       ++  NH +  E+         ++    +P ++
Sbjct: 243 RLGNLQNGTEDVKNHPWFKEV-VWEKLLSRNIETPYEPPIQ 282

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 2e-26
 Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 12/148 (8%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHK---YDA 66
             N+ +  +     +KIGDFG A   +        + L GS L+MAPE+I+      Y  
Sbjct: 132 SNNIFLHED---LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188

Query: 67  KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAI-EELHPDCVDLCRC 125
           ++D+++ G +L++L+TG+ P+   N       ++    L      +          L   
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAE 248

Query: 126 LLRQNPVERITFKEFFNHRFLGELRQTV 153
            L++   ER  F +      +  L +++
Sbjct: 249 CLKKKRDERPLFPQILAS--IELLARSL 274

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (267), Expect = 3e-26
 Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 11/159 (6%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLW 71
             N+L+  +      KI DFG  +     D   +T CG+P Y+APEI+   KY+   D W
Sbjct: 131 LDNILLDKDGHI---KIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWW 187

Query: 72  SVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
           S G +L++++ G+ PF G ++ +LF +I       +P      L  +  DL   L  + P
Sbjct: 188 SFGVLLYEMLIGQSPFHGQDEEELFHSIRMD-NPFYPRW----LEKEAKDLLVKLFVREP 242

Query: 132 VERITFK-EFFNHRFLGELRQTVHAEQHSVVPETKPMVE 169
            +R+  + +   H    E+      E+  + P  +P V+
Sbjct: 243 EKRLGVRGDIRQHPLFREINWE-ELERKEIDPPFRPKVK 280

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 5e-26
 Identities = 40/172 (23%), Positives = 65/172 (37%), Gaps = 43/172 (25%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
            N+LV++      +K+ DFG +  L    +A++  G+  YM+PE +Q   Y  ++D+WS+
Sbjct: 134 SNILVNSRGE---IKLCDFGVSGQL-IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSM 189

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTE----------------------LRFPPGA 111
           G  L ++  G+ P    +  +L        E                         PP A
Sbjct: 190 GLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMA 249

Query: 112 IEEL-----------------HPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           I EL                   +  D     L +NP ER   K+   H F+
Sbjct: 250 IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI 301

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (261), Expect = 8e-26
 Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 15/135 (11%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAK-ADLW 71
            +N+L+  N     LK+ DFG    L    +     G+ +Y  PE I+ H+Y  + A +W
Sbjct: 138 DENILIDLNR--GELKLIDFGSGA-LLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVW 194

Query: 72  SVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
           S+G +L+ +V G  PF+   ++          ++ F       +  +C  L R  L   P
Sbjct: 195 SLGILLYDMVCGDIPFEHDEEII-------RGQVFFRQ----RVSSECQHLIRWCLALRP 243

Query: 132 VERITFKEFFNHRFL 146
            +R TF+E  NH ++
Sbjct: 244 SDRPTFEEIQNHPWM 258

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 2e-25
 Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 15/162 (9%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           +NL++  +     +KI DFG  +   +      T CG+P Y+APE+++++ Y    D W 
Sbjct: 134 ENLMLDKD---GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWG 190

Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           +G ++++++ G+ PF   +  +LF+ IL   E+RFP      L P+   L   LL+++P 
Sbjct: 191 LGVVMYEMMCGRLPFYNQDHERLFELILM-EEIRFPR----TLSPEAKSLLAGLLKKDPK 245

Query: 133 ERI-----TFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVE 169
           +R+       KE   HRF   +       Q  ++P  KP V 
Sbjct: 246 QRLGGGPSDAKEVMEHRFFLSINWQ-DVVQKKLLPPFKPQVT 286

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (259), Expect = 2e-25
 Identities = 40/160 (25%), Positives = 65/160 (40%), Gaps = 25/160 (15%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           QN+LV+++      K+ DFG AR  + Q    ++  +  Y APE++    Y    DLWSV
Sbjct: 145 QNILVTSSGQI---KLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSV 201

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILT----------------------STELRFPPGA 111
           G I  ++   KP F GS+ +     IL                       S   +     
Sbjct: 202 GCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKF 261

Query: 112 IEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ 151
           + ++     DL    L  NP +RI+     +H +  +L +
Sbjct: 262 VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 301

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.7 bits (248), Expect = 4e-24
 Identities = 29/138 (21%), Positives = 59/138 (42%), Gaps = 12/138 (8%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVG 74
           N+LVS + V    K+ DFG  +  +     DT      + APE ++  K+  K+D+WS G
Sbjct: 133 NVLVSEDNV---AKVSDFGLTKEASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFG 187

Query: 75  AILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
            +L+++ + G+ P+       +   +    ++  P G      P   ++ +     +   
Sbjct: 188 ILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG----CPPAVYEVMKNCWHLDAAM 243

Query: 134 RITFKEFFNHRFLGELRQ 151
           R +F +      L  ++ 
Sbjct: 244 RPSFLQLREQ--LEHIKT 259

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 99.4 bits (247), Expect = 7e-24
 Identities = 40/156 (25%), Positives = 63/156 (40%), Gaps = 19/156 (12%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLW 71
            N+LV  N    V K+ DFG AR +   +            + APE     ++  K+D+W
Sbjct: 142 ANILVGEN---LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVW 198

Query: 72  SVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           S G +L +L T G+ P+ G    ++   +     +  PP    E      DL     R+ 
Sbjct: 199 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPP----ECPESLHDLMCQCWRKE 254

Query: 131 PVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKP 166
           P ER TF+          L+  +     S  P+ +P
Sbjct: 255 PEERPTFE---------YLQAFLEDYFTSTEPQYQP 281

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.6 bits (245), Expect = 9e-24
 Identities = 27/134 (20%), Positives = 58/134 (43%), Gaps = 10/134 (7%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADT--LCGSPLYMAPEIIQNHKYDAKADL 70
            +N LV+      V+K+ DFG +R +   +   +        +  PE++   K+ +K+D+
Sbjct: 128 ARNCLVNDQ---GVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDI 184

Query: 71  WSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           W+ G +++++ + GK P++     +  ++I     L  P             +      +
Sbjct: 185 WAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP----HLASEKVYTIMYSCWHE 240

Query: 130 NPVERITFKEFFNH 143
              ER TFK   ++
Sbjct: 241 KADERPTFKILLSN 254

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 98.3 bits (244), Expect = 2e-23
 Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 14  QNLLVSTNEVTPVLKIGDFG-FARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
            N+++S      V+  G     A S         + G+  Y++PE  +    DA++D++S
Sbjct: 140 ANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYS 199

Query: 73  VGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           +G +L++++TG+PPF G + + +    +   +   P    E L  D   +    L +NP 
Sbjct: 200 LGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-DPIPPSARHEGLSADLDAVVLKALAKNPE 258

Query: 133 ERIT 136
            R  
Sbjct: 259 NRYQ 262

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 97.5 bits (242), Expect = 3e-23
 Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 9/119 (7%)

Query: 26  VLKIGDFGFARSLTPQDLADT----LCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV 81
             KI DFG +++L   +              + APE I  +K+ +K+D+WS G ++++  
Sbjct: 145 YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 204

Query: 82  T-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE 139
           + G+ P+ G    ++   +     +  P G       +  DL       +   R  F  
Sbjct: 205 SYGQKPYRGMKGSEVTAMLEKGERMGCPAG----CPREMYDLMNLCWTYDVENRPGFAA 259

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.3 bits (244), Expect = 3e-23
 Identities = 35/158 (22%), Positives = 62/158 (39%), Gaps = 15/158 (9%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLC-----GSPLYMAPEIIQNHKYDAK 67
            +N ++        +K+ DFG AR +  ++               +MA E +Q  K+  K
Sbjct: 158 ARNCMLDEK---FTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTK 214

Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           +D+WS G +L++L+T G PP+   N   +   +L    L  P    E       ++    
Sbjct: 215 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP----EYCPDPLYEVMLKC 270

Query: 127 LRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPET 164
                  R +F E  +   +  +  T   E +  V  T
Sbjct: 271 WHPKAEMRPSFSELVSR--ISAIFSTFIGEHYVHVNAT 306

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.3 bits (244), Expect = 3e-23
 Identities = 39/182 (21%), Positives = 70/182 (38%), Gaps = 16/182 (8%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKAD 69
            +N+LV T      +KI DFG A+ L  ++    A+       +MA E I +  Y  ++D
Sbjct: 139 ARNVLVKTP---QHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSD 195

Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G  +++L+T G  P+DG    ++   +     L  PP        D   +      
Sbjct: 196 VWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP----ICTIDVYMIMVKCWM 251

Query: 129 QNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRHSLHSEHPT 188
            +   R  F+E           +     Q  +V +    + L + +      +L  E   
Sbjct: 252 IDADSRPKFRELIIE-----FSKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMDEEDM 306

Query: 189 NS 190
           + 
Sbjct: 307 DD 308

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.0 bits (243), Expect = 4e-23
 Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 28/158 (17%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLW 71
            NLL+  N V   LK+ DFG A+S  +P         +  Y APE++   + Y    D+W
Sbjct: 129 NNLLLDENGV---LKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMW 185

Query: 72  SVGAILFQLVTGKPPFDGSNQLQLFQNIL----TSTELRFP------------------- 108
           +VG IL +L+   P   G + L     I     T TE ++P                   
Sbjct: 186 AVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPL 245

Query: 109 PGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
                    D +DL + L   NP  RIT  +    ++ 
Sbjct: 246 HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYF 283

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 96.1 bits (238), Expect = 1e-22
 Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 13/143 (9%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKAD 69
            +N LV  N    V+KI DFG +R++   D             +M PE I  ++Y  ++D
Sbjct: 168 TRNCLVGEN---MVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESD 224

Query: 70  LWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +W+ G +L+++ + G  P+ G    ++   +     L  P    E    +  +L R    
Sbjct: 225 VWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACP----ENCPLELYNLMRLCWS 280

Query: 129 QNPVERITFKEFFNHRFLGELRQ 151
           + P +R +F     HR L  + +
Sbjct: 281 KLPADRPSFCSI--HRILQRMCE 301

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 95.1 bits (236), Expect = 2e-22
 Identities = 30/142 (21%), Positives = 62/142 (43%), Gaps = 12/142 (8%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADT--LCGSPLYMAPEIIQNHKYDAKADLW 71
           +N LV  N    V+K+ DFG  R +       +        + +PE+    +Y +K+D+W
Sbjct: 130 RNCLVGEN---QVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186

Query: 72  SVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQN 130
           S G +++++ + GK P++  +  ++ ++I T   L  P             +     ++ 
Sbjct: 187 SFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP----RLASTHVYQIMNHCWKER 242

Query: 131 PVERITFKEFFNHRFLGELRQT 152
           P +R  F        L E+ ++
Sbjct: 243 PEDRPAFSRLLRQ--LAEIAES 262

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.5 bits (239), Expect = 2e-22
 Identities = 36/166 (21%), Positives = 60/166 (36%), Gaps = 36/166 (21%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-----TPQDLADTLCGSPLYMAPEIIQNHK-YDAK 67
            N+L++ + V   LK+ DFG AR+      +  +       +  Y  PE++   + Y   
Sbjct: 146 ANVLITRDGV---LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPP 202

Query: 68  ADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILT------------------STELRFPP 109
            DLW  G I+ ++ T  P   G+ +      I                      +L    
Sbjct: 203 IDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVK 262

Query: 110 GAIEEL---------HPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
           G   ++          P  +DL   LL  +P +RI   +  NH F 
Sbjct: 263 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 308

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 96.4 bits (239), Expect = 3e-22
 Identities = 49/191 (25%), Positives = 70/191 (36%), Gaps = 36/191 (18%)

Query: 28  KIGDFGFARSLTPQDLADTLCGSPLYMAP-EIIQNHKYDAKADLWSVGAILFQLVTGKPP 86
           K+ DFG A+ L   +   +   S  Y AP  I     Y +  D+WS G +L +L+ G+P 
Sbjct: 163 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222

Query: 87  FDGSNQLQLFQNILTS----------------TELRFPPGAIEELH--------PDCVDL 122
           F G + +     I+                  TE +FP                P+ + L
Sbjct: 223 FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 282

Query: 123 CRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLN------SSTP 176
           C  LL   P  R+T  E   H F  ELR     + +  +P  +    L N      SS P
Sbjct: 283 CSRLLEYTPTARLTPLEACAHSFFDELR-----DPNVKLPNGRDTPALFNFTTQELSSNP 337

Query: 177 EDRHSLHSEHP 187
                L   H 
Sbjct: 338 PLATILIPPHA 348

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 94.9 bits (235), Expect = 3e-22
 Identities = 38/155 (24%), Positives = 61/155 (39%), Gaps = 26/155 (16%)

Query: 25  PVLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHKY-DAKADLWSVGAILFQLVT 82
             +K+ DFG AR+   P         +  Y APEI+   KY     D+WS+G I  ++VT
Sbjct: 139 GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198

Query: 83  GKPPFDGSNQLQLFQNILTST-----------------ELRFPPGA-------IEELHPD 118
            +  F G +++     I  +                  +  FP  A       +  L  D
Sbjct: 199 RRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDED 258

Query: 119 CVDLCRCLLRQNPVERITFKEFFNHRFLGELRQTV 153
              L   +L  +P +RI+ K    H F  ++ + V
Sbjct: 259 GRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKPV 293

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.3 bits (231), Expect = 8e-22
 Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 13/143 (9%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKA 68
            +NLL++T ++   +KIGDFG  R+L   D    + +       + APE ++   +   +
Sbjct: 139 ARNLLLATRDL---VKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHAS 195

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D W  G  L+++ T G+ P+ G N  Q+   I      R P    E+   D  ++     
Sbjct: 196 DTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE-GERLPR--PEDCPQDIYNVMVQCW 252

Query: 128 RQNPVERITFKEFFNHRFLGELR 150
              P +R TF       FL E +
Sbjct: 253 AHKPEDRPTFVAL--RDFLLEAQ 273

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.2 bits (231), Expect = 9e-22
 Identities = 29/132 (21%), Positives = 53/132 (40%), Gaps = 12/132 (9%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTL----CGSPLYMAPEIIQNHKYDAKA 68
            +N+L+         KI DFG +++L   D   T          + APE I   K+ +++
Sbjct: 137 ARNVLLVNR---HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRS 193

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G  +++ ++ G+ P+      ++   I     +  PP    E  P+   L     
Sbjct: 194 DVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP----ECPPELYALMSDCW 249

Query: 128 RQNPVERITFKE 139
                +R  F  
Sbjct: 250 IYKWEDRPDFLT 261

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.3 bits (231), Expect = 1e-21
 Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 8/127 (6%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+LV  N    V KI DFG +R                +MA E +    Y   +D+WS 
Sbjct: 156 RNILVGEN---YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSY 212

Query: 74  GAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           G +L+++V+ G  P+ G    +L++ +     L  P         +  DL R   R+ P 
Sbjct: 213 GVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP----LNCDDEVYDLMRQCWREKPY 268

Query: 133 ERITFKE 139
           ER +F +
Sbjct: 269 ERPSFAQ 275

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 91.9 bits (227), Expect = 3e-21
 Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 26/147 (17%)

Query: 26  VLKIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTG 83
            LKI DFG AR+   P         +  Y AP+++    KY    D+WSVG I  ++V G
Sbjct: 138 ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197

Query: 84  KPPFDGSNQLQLFQNIL------------------------TSTELRFPPGAIEELHPDC 119
            P F G ++      I                         T  E       ++ L    
Sbjct: 198 TPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESG 257

Query: 120 VDLCRCLLRQNPVERITFKEFFNHRFL 146
           +DL   +L+ +P +RIT K+   H + 
Sbjct: 258 IDLLSKMLKLDPNQRITAKQALEHAYF 284

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.6 bits (229), Expect = 5e-21
 Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 34/170 (20%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTP----QDLADTLCGSPLYMAPEIIQN-HKYDAK 67
             NLL++T      LKI DFG AR   P             +  Y APEI+ N   Y   
Sbjct: 137 PSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKS 193

Query: 68  ADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILT-------------------STELRFP 108
            D+WSVG IL ++++ +P F G + L    +IL                    +  L  P
Sbjct: 194 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLP 253

Query: 109 PGAIEELH-------PDCVDLCRCLLRQNPVERITFKEFFNHRFLGELRQ 151
                  +          +DL   +L  NP +RI  ++   H +L +   
Sbjct: 254 HKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD 303

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.5 bits (224), Expect = 7e-21
 Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 10/130 (7%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADL 70
             N+LVS        KI DFG AR +   +    +       + APE I    +  K+D+
Sbjct: 137 AANILVSDTLSC---KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDV 193

Query: 71  WSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           WS G +L ++VT G+ P+ G    ++ QN+     +  P    +    +   L R   ++
Sbjct: 194 WSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEELYQLMRLCWKE 249

Query: 130 NPVERITFKE 139
            P +R TF  
Sbjct: 250 RPEDRPTFDY 259

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 89.8 bits (222), Expect = 2e-20
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 14/133 (10%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTL------CGSPLYMAPEIIQNHKYDAK 67
           +N+LV++N    V K+ DFG +R L       T            + APE IQ  K+ + 
Sbjct: 157 RNILVNSN---LVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSA 213

Query: 68  ADLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCL 126
           +D+WS G +++++++ G+ P+       +   I     L  P     +       L    
Sbjct: 214 SDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPP----MDCPSALHQLMLDC 269

Query: 127 LRQNPVERITFKE 139
            +++   R  F +
Sbjct: 270 WQKDRNHRPKFGQ 282

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.1 bits (220), Expect = 2e-20
 Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 10/132 (7%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           N+LVS+N+    +K+GDFG +R +       A        +MAPE I   ++ + +D+W 
Sbjct: 138 NVLVSSNDC---VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWM 194

Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G  +++++  G  PF G     +   I     L  PP       P    L       +P
Sbjct: 195 FGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP----NCPPTLYSLMTKCWAYDP 250

Query: 132 VERITFKEFFNH 143
             R  F E    
Sbjct: 251 SRRPRFTELKAQ 262

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 90.6 bits (224), Expect = 2e-20
 Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 15/138 (10%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +NLL+        +++ DFGFA+    +    TLCG+P  +APEII +  Y+   D W++
Sbjct: 170 ENLLIDQQ---GYIQVTDFGFAKR--VKGRTWTLCGTPEALAPEIILSKGYNKAVDWWAL 224

Query: 74  GAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVE 133
           G +++++  G PPF     +Q+++ I  S ++RFP         D  DL R LL+ +  +
Sbjct: 225 GVLIYEMAAGYPPFFADQPIQIYEKI-VSGKVRFPS----HFSSDLKDLLRNLLQVDLTK 279

Query: 134 RI-----TFKEFFNHRFL 146
           R         +  NH++ 
Sbjct: 280 RFGNLKNGVNDIKNHKWF 297

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.9 bits (222), Expect = 4e-20
 Identities = 45/191 (23%), Positives = 71/191 (37%), Gaps = 36/191 (18%)

Query: 28  KIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQLVTGKPP 86
           KI DFG AR    +        +  Y APE+I N  +Y    D+WSVG I+ +++TGK  
Sbjct: 161 KILDFGLARQADSE--MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTL 218

Query: 87  FDGSNQLQLFQNI--------------------------LTSTELRFPPGAIEELHPDCV 120
           F GS+ L   + I                          L   E +     +    P  V
Sbjct: 219 FKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAV 278

Query: 121 DLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRH 180
           +L   +L  +  +R+T  E   H +   L  T   E    V +     + ++ +  E + 
Sbjct: 279 NLLEKMLVLDAEQRVTAGEALAHPYFESLHDT---EDEPQVQKYDDSFDDVDRTLDEWKR 335

Query: 181 SLHSE----HP 187
             + E     P
Sbjct: 336 VTYKEVLSFKP 346

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 89.1 bits (220), Expect = 5e-20
 Identities = 29/134 (21%), Positives = 55/134 (41%), Gaps = 10/134 (7%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADL 70
           +N+LV+      V+KI DFG AR +       +         +MAPE +    Y  K+D+
Sbjct: 193 RNVLVTHG---KVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDV 249

Query: 71  WSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQ 129
           WS G +L+++ + G  P+ G      F  ++ +    F          +   + +     
Sbjct: 250 WSYGILLWEIFSLGVNPYPGIPVDANFYKLIQN---GFKMDQPFYATEEIYIIMQSCWAF 306

Query: 130 NPVERITFKEFFNH 143
           +  +R +F    + 
Sbjct: 307 DSRKRPSFPNLTSF 320

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 89.0 bits (220), Expect = 7e-20
 Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 13/172 (7%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLW 71
             N+L+  +     ++I D G A   + +    +  G+  YMAPE++Q    YD+ AD +
Sbjct: 135 PANILLDEH---GHVRISDLGLACDFSKKKPHAS-VGTHGYMAPEVLQKGVAYDSSADWF 190

Query: 72  SVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
           S+G +LF+L+ G  PF         +  +    L       +   P+   L   LL+++ 
Sbjct: 191 SLGCMLFKLLRGHSPFRQHKTKDKHE--IDRMTLTMAVELPDSFSPELRSLLEGLLQRDV 248

Query: 132 VERIT-----FKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPED 178
             R+       +E     F   L            P   P    +N++   D
Sbjct: 249 NRRLGCLGRGAQEVKESPFFRSL-DWQMVFLQKYPPPLIPPRGEVNAADAFD 299

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.6 bits (216), Expect = 1e-19
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 5/128 (3%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
            +N+LV+ + V  +   G       +              +MAPE + +  Y  ++D+WS
Sbjct: 163 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 222

Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L+++ T G  P+ G    +LF+ +     +  P         +   + R      P
Sbjct: 223 FGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS----NCTNELYMMMRDCWHAVP 278

Query: 132 VERITFKE 139
            +R TFK+
Sbjct: 279 SQRPTFKQ 286

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.0 bits (217), Expect = 1e-19
 Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 14/166 (8%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLC--GSPLYMAPEIIQNHK--YDAKA 68
            +N+L+ +N     + + DFG ++     +        G+  YMAP+I++     +D   
Sbjct: 157 LENILLDSN---GHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAV 213

Query: 69  DLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           D WS+G ++++L+TG  PF    +      I     L+  P   +E+     DL + LL 
Sbjct: 214 DWWSLGVLMYELLTGASPFTVDGEKNSQAEISRR-ILKSEPPYPQEMSALAKDLIQRLLM 272

Query: 129 QNPVERI-----TFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVE 169
           ++P +R+        E   H F  ++          V    KP++ 
Sbjct: 273 KDPKKRLGCGPRDADEIKEHLFFQKINWD-DLAAKKVPAPFKPVIR 317

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 87.2 bits (215), Expect = 1e-19
 Identities = 25/146 (17%), Positives = 45/146 (30%), Gaps = 16/146 (10%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLAD--------TLCGSPLYMAPEIIQNHKYDA 66
           N L+   +   ++ I DFG A+                  L G+  Y +       +   
Sbjct: 133 NFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSR 192

Query: 67  KADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC----VDL 122
           + DL S+G +L     G  P+ G       Q     +E +     IE L           
Sbjct: 193 RDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-PIEVLCKGYPSEFATY 251

Query: 123 CRCLLRQNPVERITF---KEFFNHRF 145
                     ++  +   ++ F + F
Sbjct: 252 LNFCRSLRFDDKPDYSYLRQLFRNLF 277

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 86.3 bits (213), Expect = 3e-19
 Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 12/140 (8%)

Query: 15  NLLVSTNEVTPVLKIGDFGFARSLTPQDLADT--LCGSPLYMAPEIIQNHKYDAKADLWS 72
           N LV  N +   +K+ DFG +R +T               + APE +  +K+  K+D+W+
Sbjct: 145 NCLVGENHL---VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWA 201

Query: 73  VGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNP 131
            G +L+++ T G  P+ G +  Q+++ +     +  P G  E+      +L R   + NP
Sbjct: 202 FGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEK----VYELMRACWQWNP 257

Query: 132 VERITFKEFFNHRFLGELRQ 151
            +R +F E   H+    + Q
Sbjct: 258 SDRPSFAEI--HQAFETMFQ 275

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 86.0 bits (212), Expect = 4e-19
 Identities = 20/139 (14%), Positives = 39/139 (28%), Gaps = 15/139 (10%)

Query: 15  NLLVS--TNEVTPVLKIGDFGFARSL--------TPQDLADTLCGSPLYMAPEIIQNHKY 64
           N L+    ++   ++ + DFG  +           P      L G+  YM+       + 
Sbjct: 131 NFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQ 190

Query: 65  DAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDC----V 120
             + DL ++G +    + G  P+ G       Q      E +     + EL         
Sbjct: 191 SRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST-PLRELCAGFPEEFY 249

Query: 121 DLCRCLLRQNPVERITFKE 139
                           +  
Sbjct: 250 KYMHYARNLAFDATPDYDY 268

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.5 bits (213), Expect = 5e-19
 Identities = 40/182 (21%), Positives = 68/182 (37%), Gaps = 39/182 (21%)

Query: 28  KIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGKPP 86
           KI DFG AR    +        +  Y APEI+ N   Y+   D+WSVG I+ +L+TG+  
Sbjct: 161 KILDFGLARHTDDEM--TGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 218

Query: 87  FDGSNQLQLFQNILT----------------------STELRFPPGAIEE----LHPDCV 120
           F G++ +   + IL                        +  + P           +P  V
Sbjct: 219 FPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAV 278

Query: 121 DLCRCLLRQNPVERITFKEFFNHRFLGELRQTVHAEQHSVVPETKPMVELLNSSTPEDRH 180
           DL   +L  +  +RIT  +   H +  +             P+ +P+ +  + S      
Sbjct: 279 DLLEKMLVLDSDKRITAAQALAHAYFAQYHD----------PDDEPVADPYDQSFESRDL 328

Query: 181 SL 182
            +
Sbjct: 329 LI 330

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.5 bits (208), Expect = 1e-18
 Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 12/132 (9%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADT----LCGSPLYMAPEIIQNHKYDAKA 68
            +N+LV++N V    K+ DFG +R L     A            + APE I   K+ + +
Sbjct: 138 ARNILVNSNLV---CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSAS 194

Query: 69  DLWSVGAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLL 127
           D+WS G ++++++T G+ P+   +  ++ + I     L  P     +       L     
Sbjct: 195 DVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPM----DCPSAIYQLMMQCW 250

Query: 128 RQNPVERITFKE 139
           +Q    R  F +
Sbjct: 251 QQERARRPKFAD 262

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 84.5 bits (208), Expect = 2e-18
 Identities = 32/167 (19%), Positives = 61/167 (36%), Gaps = 36/167 (21%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLW 71
             N+++        L++ D+G A    P    +    S  +  PE++ +++ YD   D+W
Sbjct: 157 PHNVMIDHE--HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMW 214

Query: 72  SVGAILFQLVTGKPPFDGSN----QLQLFQNILTSTELR--------------------- 106
           S+G +L  ++  K PF   +    QL     +L + +L                      
Sbjct: 215 SLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRH 274

Query: 107 --------FPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRF 145
                           + P+ +D    LLR +   R+T +E   H +
Sbjct: 275 SRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPY 321

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.8 bits (206), Expect = 2e-18
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 27/150 (18%)

Query: 28  KIGDFGFARSL-TPQDLADTLCGSPLYMAPEIIQNHK-YDAKADLWSVGAILFQLVTGK- 84
           K+ +FG AR+   P         +  Y  P+++   K Y    D+WS G I  +L     
Sbjct: 141 KLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGR 200

Query: 85  PPFDGSNQLQLFQNIL----TSTELRFP--------------------PGAIEELHPDCV 120
           P F G++     + I     T TE ++P                       + +L+    
Sbjct: 201 PLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGR 260

Query: 121 DLCRCLLRQNPVERITFKEFFNHRFLGELR 150
           DL + LL+ NPV+RI+ +E   H +  +  
Sbjct: 261 DLLQNLLKCNPVQRISAEEALQHPYFSDFC 290

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.8 bits (206), Expect = 2e-18
 Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 14/143 (9%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADL 70
           +N+L+S      V+KI DFG AR +                 +MAPE I +  Y  ++D+
Sbjct: 163 RNILLSEK---NVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDV 219

Query: 71  WSVGAILFQLVTG-KPPFDGSNQLQLFQNILTS-TELRFPPGAIEELHPDCVDLCRCLLR 128
           WS G +L+++ +    P+ G    + F   L   T +R P    +   P+          
Sbjct: 220 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP----DYTTPEMYQTMLDCWH 275

Query: 129 QNPVERITFKEFFNHRFLGELRQ 151
             P +R TF E   H  LG L Q
Sbjct: 276 GEPSQRPTFSELVEH--LGNLLQ 296

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.2 bits (202), Expect = 7e-18
 Identities = 31/131 (23%), Positives = 60/131 (45%), Gaps = 11/131 (8%)

Query: 13  CQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKAD 69
            +N +V+ +     +KIGDFG  R +   D             +M+PE +++  +   +D
Sbjct: 161 ARNCMVAED---FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSD 217

Query: 70  LWSVGAILFQLVTG-KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLR 128
           +WS G +L+++ T  + P+ G +  Q+ + ++    L  P    +       +L R   +
Sbjct: 218 VWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP----DNCPDMLFELMRMCWQ 273

Query: 129 QNPVERITFKE 139
            NP  R +F E
Sbjct: 274 YNPKMRPSFLE 284

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.3 bits (202), Expect = 1e-17
 Identities = 35/160 (21%), Positives = 56/160 (35%), Gaps = 37/160 (23%)

Query: 28  KIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTGKPPF 87
           KI DFG AR+     +      +  Y APE+I    Y    D+WSVG I+ ++V  K  F
Sbjct: 159 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILF 218

Query: 88  DGSNQLQLFQNILTS--------------------------TELRFPPGAIEELHP---- 117
            G + +  +  ++                              L FP    + L P    
Sbjct: 219 PGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSE 278

Query: 118 -------DCVDLCRCLLRQNPVERITFKEFFNHRFLGELR 150
                     DL   +L  +P +RI+  +   H ++    
Sbjct: 279 HNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVWY 318

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 75.8 bits (185), Expect = 2e-15
 Identities = 25/177 (14%), Positives = 54/177 (30%), Gaps = 44/177 (24%)

Query: 14  QNLLVSTNEVTPVL-KIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWS 72
           +N+L+   +    L +I       +    +       +  Y +PE++    +   AD+WS
Sbjct: 155 ENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWS 214

Query: 73  VGAILFQLVTGKPPFDGS---------NQLQLFQNIL----------------------- 100
              ++F+L+TG   F+           + +     +L                       
Sbjct: 215 TACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGL 274

Query: 101 -----------TSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL 146
                          L       ++   +  D    +L+ +P +R       NH +L
Sbjct: 275 LRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 331

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.3 bits (179), Expect = 7e-15
 Identities = 29/166 (17%), Positives = 53/166 (31%), Gaps = 33/166 (19%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSL-----TPQDLADTLCGSPLYMAPEIIQ------NH 62
           +N+LV  N       I D G A        T     +   G+  YMAPE++       + 
Sbjct: 137 KNILVKKN---GTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHF 193

Query: 63  KYDAKADLWSVGAILFQLVTGKPPFDGSNQLQLFQNILTSTE----------------LR 106
           +   +AD++++G + +++             QL    L  ++                  
Sbjct: 194 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPN 253

Query: 107 FPPGAIEELHPDCV-DLCRCLLRQNPVERITFKEFFNHRFLGELRQ 151
            P           +  + R     N   R+T       + L +L Q
Sbjct: 254 IPNRWQSCEALRVMAKIMRECWYANGAARLTALRI--KKTLSQLSQ 297

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.6 bits (172), Expect = 5e-14
 Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 4/127 (3%)

Query: 14  QNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSV 73
           +N+L++   +T +   G     ++ +   +         +MAPE I N  Y  ++D+WS 
Sbjct: 174 RNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSY 233

Query: 74  GAILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPV 132
           G  L++L + G  P+ G      F  ++      F   + E    +  D+ +     +P+
Sbjct: 234 GIFLWELFSLGSSPYPGMPVDSKFYKMIKE---GFRMLSPEHAPAEMYDIMKTCWDADPL 290

Query: 133 ERITFKE 139
           +R TFK+
Sbjct: 291 KRPTFKQ 297

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	568
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.97
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.97
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.97
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.97
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.97
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.97
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.96
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.96
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.96
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.96
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.96
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.96
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.96
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.96
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.96
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.96
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.96
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.96
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.96
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.96
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.95
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.95
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.95
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.95
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.95
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.95
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.95
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.95
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.95
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.95
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.94
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.94
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.94
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.94
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.94
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.94
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.94
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.94
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.94
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.94
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.94
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.93
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.93
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.93
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.93
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.93
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.93
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.93
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.93
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.92
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.92
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.92
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.92
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.92
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.92
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.92
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.91
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.91
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.9
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.9
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.9
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.9
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.53
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	91.0
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	85.53
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	84.73

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=8.5e-32  Score=269.74  Aligned_cols=139  Identities=31%  Similarity=0.586  Sum_probs=121.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..+||||||||+|||++.++   .+||+|||+|+..... .....+||+.|||||++.+..|+.++|||||||++|+|
T Consensus       122 lH~~~ivHrDiKp~Nill~~~~---~~kl~DFG~a~~~~~~-~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel  197 (263)
T d2j4za1         122 CHSKRVIHRDIKPENLLLGSAG---ELKIADFGWSVHAPSS-RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF  197 (263)
T ss_dssp             HHHTTCCCCCCCGGGEEECTTS---CEEECCCCSCSCCCCC-CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             HHHCCeeeeeeccccceecCCC---CEeecccceeeecCCC-cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHH
Confidence            3557999999999999999877   6999999999876543 34567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ++|+.||.+.+..+.+.++... .+.+|    ..+++++.+|+.+||..||.+|||++|+++||||..
T Consensus       198 l~G~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         198 LVGKPPFEANTYQETYKRISRV-EFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA  260 (263)
T ss_dssp             HHSSCTTCCSSHHHHHHHHHTT-CCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred             hcCCCCCCCCCHHHHHHHHHcC-CCCCC----ccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence            9999999999988888877654 33444    367899999999999999999999999999999964

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=8.3e-32  Score=275.63  Aligned_cols=146  Identities=28%  Similarity=0.561  Sum_probs=113.7

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..|||||||||+|||+...+..+.+||+|||+|+.........+.+||+.|||||++.+..|+.++||||+||++|+|+
T Consensus       124 H~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell  203 (307)
T d1a06a_         124 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL  203 (307)
T ss_dssp             HHTTCCCSCCCGGGEEESSSSTTCCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             hhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHH
Confidence            55699999999999999764444589999999999877666667789999999999999999999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      +|++||.+.+..+....+... ...++...+..+++++.+||.+||..||.+|||++|+++||||..
T Consensus       204 ~g~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  269 (307)
T d1a06a_         204 CGYPPFYDENDAKLFEQILKA-EYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG  269 (307)
T ss_dssp             HSSCSCCCSSHHHHHHHHHTT-CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTS
T ss_pred             hCCCCCCCCCHHHHHHHHhcc-CCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence            999999999888888888765 344455555688999999999999999999999999999999953

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-31  Score=271.30  Aligned_cols=143  Identities=28%  Similarity=0.512  Sum_probs=124.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..|||||||||+|||++.++   .+||+|||+|+.+.... .....+||+.|||||++.+..|+.++||||+||++|+
T Consensus       132 LH~~~iiHrDiKp~NILl~~~~---~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilye  208 (293)
T d1yhwa1         132 LHSNQVIHRDIKSDNILLGMDG---SVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIE  208 (293)
T ss_dssp             HHHTTEECCCCSGGGEEECTTC---CEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHH
T ss_pred             HHHCCCcccCCcHHHeEECCCC---cEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHH
Confidence            3557999999999999998876   69999999999875433 4556789999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      |++|+.||.+.+..+.+..+.....+.+  ..+..+++++++||.+||..||.+|||++|+++||||+.
T Consensus       209 mltG~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         209 MIEGEPPYLNENPLRALYLIATNGTPEL--QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             HHHSSCTTTTSCHHHHHHHHHHHCSCCC--SSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred             HhhCCCCCCCCCHHHHHHHHHhCCCCCC--CCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence            9999999999888887777766544332  234578999999999999999999999999999999964

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=1.1e-30  Score=268.24  Aligned_cols=144  Identities=31%  Similarity=0.599  Sum_probs=126.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..|||||||||+|||++.++   .+||+|||+|+....  ...+.+||+.|||||++.+..|+.++||||+||++|+|
T Consensus       120 lH~~~iiHrDiKp~NILl~~~g---~vkL~DFG~a~~~~~--~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyem  194 (316)
T d1fota_         120 LHSKDIIYRDLKPENILLDKNG---HIKITDFGFAKYVPD--VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEM  194 (316)
T ss_dssp             HHTTTEECCCCCGGGEEECTTS---CEEECCCSSCEECSS--CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHH
T ss_pred             hccCcEEccccCchheeEcCCC---CEEEecCccceEecc--ccccccCcccccCHHHHcCCCCCchhhccccchhHHHH
Confidence            4667999999999999999877   699999999988654  34568999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~~~  154 (568)
                      ++|+.||.+.+..+.+.++... ...+|    ..+++++.+++.+||..||.+|+     |++++++||||+.+.+...
T Consensus       195 ltG~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i~~~~l  268 (316)
T d1fota_         195 LAGYTPFYDSNTMKTYEKILNA-ELRFP----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKL  268 (316)
T ss_dssp             HHSSCTTCCSSHHHHHHHHHHC-CCCCC----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHH
T ss_pred             HhCCCCCCCcCHHHHHHHHHcC-CCCCC----CCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccCCHHHH
Confidence            9999999999998888888765 33444    36789999999999999999996     9999999999998876543

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.2e-31  Score=272.69  Aligned_cols=145  Identities=29%  Similarity=0.627  Sum_probs=127.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..|||||||||+|||++.++   .+||+|||+|+.... .....+.+||+.|||||++.+..|+.++||||+||++||
T Consensus       121 lH~~~iiHRDlKP~NILl~~~g---~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilye  197 (337)
T d1o6la_         121 LHSRDVVYRDIKLENLMLDKDG---HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYE  197 (337)
T ss_dssp             HHHTTCBCCCCCGGGEEECTTS---CEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHH
T ss_pred             hhhcCccccccCHHHeEecCCC---CEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHH
Confidence            3567999999999999999887   799999999987643 445667899999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQTV  153 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~~  153 (568)
                      |++|++||.+.+..+++..+... .+.+|    ..+++++++||.+||+.||.+|++     ++|+++||||..+.+..
T Consensus       198 ml~G~~pf~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i~~~~  271 (337)
T d1o6la_         198 MMCGRLPFYNQDHERLFELILME-EIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQD  271 (337)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHC-CCCCC----TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHH
T ss_pred             HHHCCCCCCCcCHHHHHHHHhcC-CCCCC----ccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcccccCCHHH
Confidence            99999999999998888877664 34444    468999999999999999999994     99999999998876654

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.6e-31  Score=271.14  Aligned_cols=144  Identities=31%  Similarity=0.583  Sum_probs=121.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---CCCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+||||||||+|||++.++   .+||+|||+|+.+...   ....+.+||+.|||||++.+..|+.++||||+||++
T Consensus       124 lH~~~iiHrDiKp~NIll~~~~---~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvil  200 (288)
T d1uu3a_         124 LHGKGIIHRDLKPENILLNEDM---HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII  200 (288)
T ss_dssp             HHHTTEECSCCSGGGEEECTTS---CEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred             hccccEEcCcCCccccccCCCc---eEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHH
Confidence            3557999999999999999877   6999999999987533   234567899999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHH------HHhchhHHHhHH
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKE------FFNHRFLGELRQ  151 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeE------lL~Hpff~~~~~  151 (568)
                      |+|++|+.||.+.+..+++.++... .+.+|    ..+++++++||.+||+.||.+|||++|      +++||||+.+.|
T Consensus       201 yell~g~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~w  275 (288)
T d1uu3a_         201 YQLVAGLPPFRAGNEYLIFQKIIKL-EYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW  275 (288)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHTT-CCCCC----TTCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCC
T ss_pred             HHHhhCCCCCCCcCHHHHHHHHHcC-CCCCC----ccCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCCH
Confidence            9999999999999998888888764 34444    367899999999999999999999987      688999987765


Q ss_pred             h
Q 008370          152 T  152 (568)
Q Consensus       152 ~  152 (568)
                      .
T Consensus       276 ~  276 (288)
T d1uu3a_         276 E  276 (288)
T ss_dssp             T
T ss_pred             H
Confidence            4

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.4e-31  Score=267.80  Aligned_cols=146  Identities=28%  Similarity=0.445  Sum_probs=123.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..+||||||||+|||++.++   .+||+|||+++...........+||+.|+|||++.+..|+.++||||+||++|||+
T Consensus       133 H~~~ivHrDiKp~NILi~~~~---~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell  209 (305)
T d1blxa_         133 HSHRVVHRDLKPQNILVTSSG---QIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF  209 (305)
T ss_dssp             HHTTCCCCCCCGGGEEECTTC---CEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred             HhCCEEecCCCccEEEEcCCC---CeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHH
Confidence            557999999999999999877   69999999998776666667889999999999999999999999999999999999


Q ss_pred             hCCCCCCCCcHHHHHHHHHhccCC----CCC------------------CCcccccCHHHHHHHHHhhccCCCCCCCHHH
Q 008370           82 TGKPPFDGSNQLQLFQNILTSTEL----RFP------------------PGAIEELHPDCVDLCRCLLRQNPVERITFKE  139 (568)
Q Consensus        82 tG~~PF~g~~~~~~~~~Il~~~~~----~~p------------------~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeE  139 (568)
                      +|++||.+.+..+.+.++......    .++                  ......+++.+.+||.+||+.||.+|||++|
T Consensus       210 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e  289 (305)
T d1blxa_         210 RRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYS  289 (305)
T ss_dssp             HSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHH
Confidence            999999999888877776542110    000                  0122456789999999999999999999999


Q ss_pred             HHhchhHHHhH
Q 008370          140 FFNHRFLGELR  150 (568)
Q Consensus       140 lL~Hpff~~~~  150 (568)
                      +++||||+++.
T Consensus       290 ~L~Hpff~~i~  300 (305)
T d1blxa_         290 ALSHPYFQDLE  300 (305)
T ss_dssp             HHTSGGGTTCC
T ss_pred             HhcChhhcCch
Confidence            99999997664

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.7e-31  Score=265.03  Aligned_cols=135  Identities=26%  Similarity=0.515  Sum_probs=108.4

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhC
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG   83 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG   83 (568)
                      +||||||||+|||++.++   .+||+|||+|+.+.... ...+.+||+.|||||++.+..|+.++|||||||++|||++|
T Consensus       134 ~IiHrDiKp~NIll~~~~---~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg  210 (269)
T d2java1         134 TVLHRDLKPANVFLDGKQ---NVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCAL  210 (269)
T ss_dssp             ------CCGGGEEECTTS---CEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             CEEeCcCchhhcCcCCCC---cEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhC
Confidence            599999999999999877   69999999998875433 44568999999999999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhH
Q 008370           84 KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFL  146 (568)
Q Consensus        84 ~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff  146 (568)
                      +.||.+.+..++..++.......+|    ..+++++.+||.+||..||.+|||++|+++|||+
T Consensus       211 ~~Pf~~~~~~~~~~~i~~~~~~~~~----~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         211 MPPFTAFSQKELAGKIREGKFRRIP----YRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             SCSCCCSSHHHHHHHHHHTCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             CCCCCCCCHHHHHHHHHcCCCCCCC----cccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            9999999988888888765433333    4678999999999999999999999999999995

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.2e-31  Score=266.69  Aligned_cols=142  Identities=23%  Similarity=0.422  Sum_probs=114.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---CCCccccCCCcccChhhhccCCC-CcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---DLADTLCGSPLYMAPEIIQNHKY-DAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---~~~~t~~GT~~YmAPEvl~~~~y-s~ksDIWSlGvi   76 (568)
                      ||..|||||||||+|||++.++   .+||+|||+|+.+...   ....+.+||+.|||||++.+..+ +.++||||+||+
T Consensus       119 lH~~~IiHrDiKp~NILl~~~~---~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvi  195 (271)
T d1nvra_         119 LHGIGITHRDIKPENLLLDERD---NLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIV  195 (271)
T ss_dssp             HHHTTEECSCCCGGGEEECTTC---CEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHH
T ss_pred             HHHcCCccCcccHHHEEECCCC---CEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHH
Confidence            3557999999999999999876   6999999999876432   23456789999999999988876 467999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                      +|+|++|++||.+................  ....+..+++++.+|+.+||..||.+|||++|+++||||+
T Consensus       196 lyeml~G~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~  264 (271)
T d1nvra_         196 LTAMLAGELPWDQPSDSCQEYSDWKEKKT--YLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYN  264 (271)
T ss_dssp             HHHHHHSSCSCSSSSTTSHHHHHHHTTCT--TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTT
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHhcCCC--CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhC
Confidence            99999999999876543332222222221  1223457889999999999999999999999999999995

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.96  E-value=7.1e-31  Score=273.52  Aligned_cols=147  Identities=25%  Similarity=0.441  Sum_probs=129.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..|||||||||+|||++.+. .+.+||+|||+|+.+.......+.+||+.|||||++.+..|+.++||||+||++|+|
T Consensus       140 lH~~~iiHrDiKp~NIll~~~~-~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyel  218 (350)
T d1koaa2         140 MHENNYVHLDLKPENIMFTTKR-SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYIL  218 (350)
T ss_dssp             HHHTTEECCCCCGGGEEESSTT-SCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHH
T ss_pred             HHhcCCeeeeechhHeeeccCC-CCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHH
Confidence            3567999999999999997543 247999999999988777777778999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++|+.||.+.+..+.+..+... ...++...+..+++++++||.+||..||.+|||++|+++||||...
T Consensus       219 l~G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~  286 (350)
T d1koaa2         219 LSGLSPFGGENDDETLRNVKSC-DWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG  286 (350)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHT-CCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCT
T ss_pred             HhCCCCCCCCCHHHHHHHHHhC-CCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            9999999999988888888764 3445555566789999999999999999999999999999999654

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=1.4e-30  Score=271.24  Aligned_cols=144  Identities=28%  Similarity=0.595  Sum_probs=126.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..+||||||||+|||++.++   .+||+|||+|+.+..  ...+.+||+.|||||++.+..|+.++|||||||++|+|
T Consensus       157 LH~~~iiHRDIKP~NILl~~~g---~ikL~DFG~a~~~~~--~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyem  231 (350)
T d1rdqe_         157 LHSLDLIYRDLKPENLLIDQQG---YIQVTDFGFAKRVKG--RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEM  231 (350)
T ss_dssp             HHHTTEECCCCSGGGEEECTTS---CEEECCCTTCEECSS--CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HHhCCEecCcCCHHHcccCCCC---CEEeeeceeeeeccc--ccccccCccccCCHHHHcCCCCCccccccchhHHHHHH
Confidence            3567999999999999999877   799999999998753  34567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHhhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~~~  154 (568)
                      ++|+.||.+.+....+.++... ...+|    ..+++++.+||++||..||.+|+     |++++++||||..+.+...
T Consensus       232 ltG~~Pf~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~~~~~~  305 (350)
T d1rdqe_         232 AAGYPPFFADQPIQIYEKIVSG-KVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAI  305 (350)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHC-CCCCC----TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHH
T ss_pred             HhCCCCCCCcCHHHHHHHHhcC-CCCCC----ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccccCCCHHHH
Confidence            9999999999988888888765 33333    36889999999999999999995     9999999999988876544

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.2e-31  Score=266.51  Aligned_cols=149  Identities=24%  Similarity=0.458  Sum_probs=128.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCC-CCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEV-TPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~-~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..+||||||||+|||++.++. ...+||+|||+|+.........+.+||+.|+|||++.+..|+.++||||+||++|+
T Consensus       129 LH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilye  208 (293)
T d1jksa_         129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYI  208 (293)
T ss_dssp             HHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHH
T ss_pred             hhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHH
Confidence            35579999999999999987653 34699999999998876666777899999999999999999999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      |++|+.||.+.+..+.+..+... ...++...+..+++.+.+||++||..||.+|||++|+++||||+...
T Consensus       209 ll~g~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~  278 (293)
T d1jksa_         209 LLSGASPFLGDTKQETLANVSAV-NYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  278 (293)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHTT-CCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC--
T ss_pred             HHcCCCCCCCCCHHHHHHHHHhc-CCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence            99999999999988888877654 34444444567889999999999999999999999999999996543

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.96  E-value=8.8e-31  Score=273.02  Aligned_cols=146  Identities=25%  Similarity=0.524  Sum_probs=129.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..|||||||||+||||+... .+.+||+|||+|+.+.......+.+||+.|||||++.+..|+.++||||+||++|+|
T Consensus       143 lH~~~iiHRDiKp~NILl~~~~-~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyel  221 (352)
T d1koba_         143 MHEHSIVHLDIKPENIMCETKK-ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVL  221 (352)
T ss_dssp             HHHTTEECCCCCGGGEEESSTT-CCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHH
T ss_pred             HHHCCeeecccccccccccccC-CCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHH
Confidence            3557999999999999998532 237999999999998877777788999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ++|+.||.+.+..+.+..+... ...++...+..+++++.+||.+||..||.+|||++|+++||||+.
T Consensus       222 ltG~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~  288 (352)
T d1koba_         222 LSGLSPFAGEDDLETLQNVKRC-DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKG  288 (352)
T ss_dssp             HHSCCSSCCSSHHHHHHHHHHC-CCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSS
T ss_pred             HhCCCCCCCCCHHHHHHHHHhC-CCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence            9999999999988888887765 445566666788999999999999999999999999999999964

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.4e-31  Score=272.16  Aligned_cols=148  Identities=32%  Similarity=0.607  Sum_probs=122.8

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++..+++||+|||+|+...........+||+.|||||++.+..|+.++||||+||++|+|
T Consensus       127 lH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~l  206 (335)
T d2ozaa1         127 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL  206 (335)
T ss_dssp             HHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHH
T ss_pred             HHHcCCccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHH
Confidence            35679999999999999998666668999999999988777777788999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHh---ccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILT---STELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~---~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ++|++||.+.+.......+..   .....+|...+..+++++.+||++||+.||.+|||++|+++||||.+
T Consensus       207 ltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~  277 (335)
T d2ozaa1         207 LCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ  277 (335)
T ss_dssp             TTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHT
T ss_pred             hhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhC
Confidence            999999987765444333322   23444555555678999999999999999999999999999999954

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=9.2e-31  Score=265.48  Aligned_cols=142  Identities=25%  Similarity=0.442  Sum_probs=120.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhc-----cCCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQ-----NHKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~-----~~~ys~ksDIWSlG   74 (568)
                      ||..|||||||||+|||++.++   .+||+|||+|+..... ....+.+||+.|||||++.     ...|+.++||||+|
T Consensus       126 lH~~~ivHrDiKp~NIll~~~~---~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlG  202 (288)
T d2jfla1         126 LHDNKIIHRDLKAGNILFTLDG---DIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLG  202 (288)
T ss_dssp             HHHTTEECCCCSGGGEEECTTS---CEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHH
T ss_pred             HHHCCEEEeecChhheeECCCC---CEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHH
Confidence            3556999999999999999877   6999999999875432 2334678999999999984     45688999999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                      |++|+|++|+.||.+.+..+.+.++.......+  ..+..+++++.+||.+||+.||.+|||++|+++||||+
T Consensus       203 vilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~  273 (288)
T d2jfla1         203 ITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL--AQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVT  273 (288)
T ss_dssp             HHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCC--SSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGC
T ss_pred             HHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC--CccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence            999999999999999888888888876543222  23457889999999999999999999999999999995

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.6e-30  Score=265.68  Aligned_cols=141  Identities=25%  Similarity=0.444  Sum_probs=110.3

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhC
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG   83 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG   83 (568)
                      .|||||||||+|||++.++   .+||+|||+|+.... ....+.+||+.|||||++.+..|+.++||||+||++|||++|
T Consensus       124 ~~IiHRDiKP~NILl~~~~---~vkl~DFGla~~~~~-~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G  199 (322)
T d1s9ja_         124 HKIMHRDVKPSNILVNSRG---EIKLCDFGVSGQLID-SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG  199 (322)
T ss_dssp             HCCCCSCCSGGGEEECTTC---CEEECCCCCCHHHHH-HTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHS
T ss_pred             CCEEccccCHHHeeECCCC---CEEEeeCCCccccCC-CccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHC
Confidence            3899999999999999877   699999999986543 234567999999999999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHH------------------------------------------HHHHhccCCCCCCCcccccCHHHHH
Q 008370           84 KPPFDGSNQLQLF------------------------------------------QNILTSTELRFPPGAIEELHPDCVD  121 (568)
Q Consensus        84 ~~PF~g~~~~~~~------------------------------------------~~Il~~~~~~~p~~~~~~ls~~~~d  121 (568)
                      +.||.+.+.....                                          ..+....   .+......++.++++
T Consensus       200 ~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~d  276 (322)
T d1s9ja_         200 RYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEP---PPKLPSGVFSLEFQD  276 (322)
T ss_dssp             SCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSC---CCCCCBTTBCHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccC---CccCccccCCHHHHH
Confidence            9999875432210                                          0000000   011111235789999


Q ss_pred             HHHHhhccCCCCCCCHHHHHhchhHHHhHH
Q 008370          122 LCRCLLRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       122 LI~~cL~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      |+.+||..||.+|||++|+++||||++..+
T Consensus       277 li~~~L~~dP~~R~ta~e~L~Hpf~~~~~~  306 (322)
T d1s9ja_         277 FVNKCLIKNPAERADLKQLMVHAFIKRSDA  306 (322)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSHHHHHHHH
T ss_pred             HHHHHcCCChhHCcCHHHHhhCHhhCcCCc
Confidence            999999999999999999999999987654

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=2.8e-30  Score=264.52  Aligned_cols=139  Identities=29%  Similarity=0.497  Sum_probs=119.7

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc---CCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN---HKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~---~~ys~ksDIWSlGviL   77 (568)
                      ||..|||||||||+|||++.++   .+||+|||+|+....   ....+||+.|||||++.+   ..|+.++|||||||++
T Consensus       131 LH~~~iiHrDiKp~NILl~~~~---~~Kl~DFG~a~~~~~---~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvil  204 (309)
T d1u5ra_         131 LHSHNMIHRDVKAGNILLSEPG---LVKLGDFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITC  204 (309)
T ss_dssp             HHHTTCBCCCCSGGGEEEETTT---EEEECCCTTCBSSSS---BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHH
T ss_pred             HHhCCEeccCCCcceEEECCCC---CEEEeecccccccCC---CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHH
Confidence            3567999999999999999877   799999999987543   345789999999999864   4689999999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      |||++|..||.+.+..+.+.++.......++   ...+++.+.+||.+||..||.+|||++|+++||||..
T Consensus       205 yel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~  272 (309)
T d1u5ra_         205 IELAERKPPLFNMNAMSALYHIAQNESPALQ---SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (309)
T ss_dssp             HHHHHSSCTTTTSCHHHHHHHHHHSCCCCCS---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred             HHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcC
Confidence            9999999999999888888888766443333   2367899999999999999999999999999999964

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.8e-30  Score=259.54  Aligned_cols=135  Identities=26%  Similarity=0.544  Sum_probs=110.6

Q ss_pred             CeEecCCCCCCeEEec-CCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHHhC
Q 008370            5 FMIVSANACQNLLVST-NEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLVTG   83 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~-~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELltG   83 (568)
                      +||||||||+|||++. ++   .+||+|||+|+.... ....+.+||+.|||||++.+ +|+.++||||+||++|||++|
T Consensus       134 ~IiHrDiKp~NILl~~~~~---~~Kl~DFGla~~~~~-~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g  208 (270)
T d1t4ha_         134 PIIHRDLKCDNIFITGPTG---SVKIGDLGLATLKRA-SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATS  208 (270)
T ss_dssp             CCCCSCCCGGGEEESSTTS---CEEECCTTGGGGCCT-TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHS
T ss_pred             CEEeCCcChhhceeeCCCC---CEEEeecCcceeccC-CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHC
Confidence            3999999999999964 44   699999999976433 34557899999999999865 599999999999999999999


Q ss_pred             CCCCCCCcHH-HHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHH
Q 008370           84 KPPFDGSNQL-QLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus        84 ~~PF~g~~~~-~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~  147 (568)
                      +.||.+.... .++..+....   .|.......++++.+||.+||..||++|||++|+++||||+
T Consensus       209 ~~Pf~~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         209 EYPYSECQNAAQIYRRVTSGV---KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             SCTTTTCSSHHHHHHHHTTTC---CCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             CCCCCCcccHHHHHHHHHcCC---CCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            9999876544 4444444332   22333456788999999999999999999999999999984

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.96  E-value=6.6e-30  Score=267.43  Aligned_cols=148  Identities=25%  Similarity=0.419  Sum_probs=119.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhc-cCCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQ-NHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~-~~~ys~ksDIWSlGviL~E   79 (568)
                      ||..|||||||||+|||++.++   .+||+|||+|+.+... .....+||+.|||||++. +..|+.++|||||||++|+
T Consensus       123 lH~~~iiHrDlKP~NILl~~~g---~iKl~DFGla~~~~~~-~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilye  198 (364)
T d1omwa3         123 MHNRFVVYRDLKPANILLDEHG---HVRISDLGLACDFSKK-KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFK  198 (364)
T ss_dssp             HHHTTEECCCCSGGGEEECSSS---CEEECCCTTCEECSSS-CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHH
T ss_pred             HHHCCccceeeccceeEEcCCC---cEEEeeeceeeecCCC-cccccccccccchhHHhhcCCCCCcccchhHHHHHHHH
Confidence            3557999999999999999877   7999999999977644 345678999999999996 4578999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCC-----HHHHHhchhHHHhHHhhh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERIT-----FKEFFNHRFLGELRQTVH  154 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpT-----aeElL~Hpff~~~~~~~~  154 (568)
                      |++|+.||.+.+...... +... ....+...+..+++++.+||.+||..||.+|||     ++|+++||||+.+.|...
T Consensus       199 mltG~~Pf~~~~~~~~~~-~~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i~~~~~  276 (364)
T d1omwa3         199 LLRGHSPFRQHKTKDKHE-IDRM-TLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMV  276 (364)
T ss_dssp             HHHSSCSSCSSCSSCHHH-HHHH-SSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTCCHHHH
T ss_pred             HHhCCCCCCCCCHHHHHH-HHHh-cccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCCCHHHH
Confidence            999999998755332222 1111 112223344578999999999999999999999     799999999998876544

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.96  E-value=1.7e-29  Score=254.74  Aligned_cols=144  Identities=28%  Similarity=0.581  Sum_probs=125.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc------CCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN------HKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~------~~ys~ksDIWSlG   74 (568)
                      ||..|||||||||+|||++.++   .+||+|||+++.+.........+||+.|+|||++.+      ..|+.++||||+|
T Consensus       126 lH~~~ivHrDlkp~Nill~~~~---~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslG  202 (277)
T d1phka_         126 LHKLNIVHRDLKPENILLDDDM---NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG  202 (277)
T ss_dssp             HHHTTEECSCCSGGGEEECTTC---CEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHH
T ss_pred             HHHcCCcccccccceEEEcCCC---CeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccc
Confidence            3557999999999999999877   799999999998876666667889999999999853      4578899999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      |++|+|++|+.||.+.+.......+... ...++......+++++++|+.+||..||.+|||++|+++||||++
T Consensus       203 vilyeml~g~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         203 VIMYTLLAGSPPFWHRKQMLMLRMIMSG-NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             HHHHHHHHSSCSSCCSSHHHHHHHHHHT-CCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             hhhhhhccCCCCCCCCCHHHHHHHHHhC-CCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence            9999999999999999988888877765 334455555688999999999999999999999999999999965

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.2e-29  Score=255.14  Aligned_cols=144  Identities=27%  Similarity=0.451  Sum_probs=117.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      |..|||||||||+|||++.++   .+||+|||+|+...... ...+.+||+.|+|||++.. ..|+.++||||+||++||
T Consensus       117 H~~~iiHrDiKp~NIli~~~~---~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~e  193 (299)
T d1ua2a_         117 HQHWILHRDLKPNNLLLDENG---VLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAE  193 (299)
T ss_dssp             HHTTCCCCCCCGGGEEECTTC---CEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHH
T ss_pred             hccceecccCCcceEEecCCC---ccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHH
Confidence            456999999999999999877   69999999998765433 3456789999999999865 467999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCC-------------------CCCC----cccccCHHHHHHHHHhhccCCCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELR-------------------FPPG----AIEELHPDCVDLCRCLLRQNPVERIT  136 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~-------------------~p~~----~~~~ls~~~~dLI~~cL~~dP~~RpT  136 (568)
                      |++|.+||.+.+..+.+.++.......                   .+..    ....+++++.+||.+||+.||++|||
T Consensus       194 l~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~s  273 (299)
T d1ua2a_         194 LLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT  273 (299)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred             HHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcC
Confidence            999999999999888877776421100                   0000    11245789999999999999999999


Q ss_pred             HHHHHhchhHHH
Q 008370          137 FKEFFNHRFLGE  148 (568)
Q Consensus       137 aeElL~Hpff~~  148 (568)
                      ++|+++||||+.
T Consensus       274 a~e~L~Hp~f~~  285 (299)
T d1ua2a_         274 ATQALKMKYFSN  285 (299)
T ss_dssp             HHHHHTSGGGTS
T ss_pred             HHHHhCCHhhCC
Confidence            999999999954

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=8.6e-30  Score=262.02  Aligned_cols=146  Identities=28%  Similarity=0.466  Sum_probs=128.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++ ...+||+|||+++.........+.+||+.|+|||++.+..|+.++||||+||++|+|
T Consensus       118 LH~~~iiHrDlKp~NIll~~~~-~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~l  196 (321)
T d1tkia_         118 LHSHNIGHFDIRPENIIYQTRR-SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVL  196 (321)
T ss_dssp             HHHTTEECCCCCGGGEEESSSS-CCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCcccccccceeecCCC-ceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHH
Confidence            3567999999999999998654 347999999999988766666778899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGE  148 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~  148 (568)
                      ++|..||.+.+..+.+.++... ...++...+..+++++++||.+||..||.+|||++|+++||||.+
T Consensus       197 l~G~~Pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~  263 (321)
T d1tkia_         197 LSGINPFLAETNQQIIENIMNA-EYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             HHSSCTTCCSSHHHHHHHHHHT-CCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHS
T ss_pred             HhCCCCCCCCCHHHHHHHHHhC-CCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence            9999999999998888888765 444555455578999999999999999999999999999999964

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.4e-29  Score=260.48  Aligned_cols=144  Identities=27%  Similarity=0.554  Sum_probs=125.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-CCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-DLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      |..+||||||||+|||++.++   .+||+|||+++..... ......+||+.|+|||++.+..|+.++||||+||++|+|
T Consensus       120 H~~~iiHrDikp~NiL~~~~~---~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyem  196 (320)
T d1xjda_         120 HSKGIVYRDLKLDNILLDKDG---HIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEM  196 (320)
T ss_dssp             HHTTCBCCCCCGGGEEECTTS---CEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHH
T ss_pred             HhCCeeeccCcccceeecCCC---ceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHH
Confidence            556999999999999999877   6999999999876543 344557899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHH-HHHhchhHHHhHHhh
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFK-EFFNHRFLGELRQTV  153 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTae-ElL~Hpff~~~~~~~  153 (568)
                      ++|+.||.+.+..+++.++... .+.+|    ..+++++.+||.+||..||.+||++. ++++||||+.+.+..
T Consensus       197 ltG~~PF~~~~~~~~~~~i~~~-~~~~p----~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~~~~~  265 (320)
T d1xjda_         197 LIGQSPFHGQDEEELFHSIRMD-NPFYP----RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREINWEE  265 (320)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHC-CCCCC----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCCHHH
T ss_pred             HhCCCCCCCCCHHHHHHHHHcC-CCCCC----ccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccCCHHH
Confidence            9999999999998888887654 33444    36789999999999999999999996 899999998876543

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.3e-29  Score=251.42  Aligned_cols=135  Identities=28%  Similarity=0.538  Sum_probs=111.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCC-CcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKY-DAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~y-s~ksDIWSlGviL~E   79 (568)
                      ||..+||||||||+|||++.+.  +.+||+|||+|+.... ....+.+||+.|+|||++.+..+ +.++||||+||++|+
T Consensus       126 lH~~~iiHrDiKp~NIll~~~~--~~vkl~DFG~a~~~~~-~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilye  202 (273)
T d1xwsa_         126 CHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYD  202 (273)
T ss_dssp             HHHTTEECSCCSGGGEEEETTT--TEEEECCCTTCEECCS-SCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred             HHHCCCccccCcccceEEecCC--CeEEECccccceeccc-ccccccccCCCcCCHHHHcCCCCCCcccccccceeeehh
Confidence            3557999999999999998653  2799999999987543 34557889999999999987765 566899999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++|+.||.+.+      .+... ...++    ..+++++.+||.+||..||.+|||++|+++||||+.+
T Consensus       203 ll~g~~Pf~~~~------~i~~~-~~~~~----~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  261 (273)
T d1xwsa_         203 MVCGDIPFEHDE------EIIRG-QVFFR----QRVSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV  261 (273)
T ss_dssp             HHHSSCSCCSHH------HHHHC-CCCCS----SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             HhhCCCCCCCch------HHhhc-ccCCC----CCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence            999999997643      23332 33333    3678999999999999999999999999999999764

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.6e-28  Score=254.64  Aligned_cols=148  Identities=32%  Similarity=0.518  Sum_probs=122.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      ||..|||||||||+|||++.++.  .+||+|||+++.+.......+.+||+.|+|||++.+ ..|+.++||||+||++||
T Consensus       138 LH~~~IiHrDiKp~NILl~~~~~--~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~e  215 (350)
T d1q5ka_         138 IHSFGICHRDIKPQNLLLDPDTA--VLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE  215 (350)
T ss_dssp             HHTTTEECCCCCGGGEEECTTTC--CEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             HHhcCCcccCCCcceEEEecCCC--ceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEe
Confidence            46679999999999999987653  699999999998877777778899999999998865 578999999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhcc----------------CCCCCC--------CcccccCHHHHHHHHHhhccCCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTST----------------ELRFPP--------GAIEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~----------------~~~~p~--------~~~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      |++|++||.+.+..+.+..+....                ...++.        ......++++.+||.+||..||.+||
T Consensus       216 l~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~  295 (350)
T d1q5ka_         216 LLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL  295 (350)
T ss_dssp             HHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred             hhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCc
Confidence            999999999988777766654310                011111        11234688999999999999999999


Q ss_pred             CHHHHHhchhHHHhH
Q 008370          136 TFKEFFNHRFLGELR  150 (568)
Q Consensus       136 TaeElL~Hpff~~~~  150 (568)
                      |+.|+++||||+++.
T Consensus       296 ta~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         296 TPLEACAHSFFDELR  310 (350)
T ss_dssp             CHHHHHTSGGGGGGG
T ss_pred             CHHHHhcCHhhcccc
Confidence            999999999997764

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.9e-28  Score=246.78  Aligned_cols=142  Identities=20%  Similarity=0.345  Sum_probs=117.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..+||||||||+|||++.++   .+||+|||+++.+....    ......||+.|||||++.+..|+.++|||||||++
T Consensus       124 H~~~iiHrDlKp~Nill~~~~---~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l  200 (277)
T d1xbba_         124 EESNFVHRDLAARNVLLVTQH---YAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLM  200 (277)
T ss_dssp             HHTTEECSCCSGGGEEEEETT---EEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred             HhCCcccCCCcchhhcccccC---cccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhh
Confidence            456999999999999999887   79999999999765432    22345789999999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHH---HhchhHHHhH
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF---FNHRFLGELR  150 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeEl---L~Hpff~~~~  150 (568)
                      |||++ |++||.+.+..+....+..+..+..|    ..+++++.+||.+||..||.+|||++++   |+|+|+..+.
T Consensus       201 ~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p----~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~~  273 (277)
T d1xbba_         201 WEAFSYGQKPYRGMKGSEVTAMLEKGERMGCP----AGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVN  273 (277)
T ss_dssp             HHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHH
T ss_pred             hHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCC----cccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhhcCC
Confidence            99998 89999999888887777665444444    3678999999999999999999999998   4566665443

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2e-28  Score=245.62  Aligned_cols=140  Identities=26%  Similarity=0.400  Sum_probs=117.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..+||||||||+||||+.++   .+||+|||+|+.+....  ......||+.|||||++.+..|+.++|||||||++||
T Consensus       126 H~~~ivHrDiKp~NIll~~~~---~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~e  202 (272)
T d1qpca_         126 EERNYIHRDLRAANILVSDTL---SCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE  202 (272)
T ss_dssp             HHTTEECSCCSGGGEEECTTS---CEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHH
T ss_pred             HhCCcccCccchhheeeeccc---ceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHH
Confidence            567999999999999999877   79999999999876443  2345678999999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh--chhHHH
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN--HRFLGE  148 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~--Hpff~~  148 (568)
                      |++ |.+||...+..+.+..+.....+..|    ..+++++.+|+.+||..||++|||++++++  |+||..
T Consensus       203 llt~~~~~~~~~~~~~~~~~i~~~~~~~~p----~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         203 IVTHGRIPYPGMTNPEVIQNLERGYRMVRP----DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             HHTTTCCSSTTCCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHhcCCCCCc----ccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence            999 56667777777777777665444333    467889999999999999999999999987  788853

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.2e-28  Score=248.14  Aligned_cols=139  Identities=23%  Similarity=0.339  Sum_probs=108.4

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC---CCCccccCCCcccChhhhcc---CCCCcccchhhHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ---DLADTLCGSPLYMAPEIIQN---HKYDAKADLWSVGA   75 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~---~~~~t~~GT~~YmAPEvl~~---~~ys~ksDIWSlGv   75 (568)
                      |..+||||||||+|||++.++   .+||+|||+|+.....   ....+.+||+.|||||++.+   ..|+.++|||||||
T Consensus       121 H~~~ivHrDlKp~NiLl~~~~---~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv  197 (276)
T d1uwha_         121 HAKSIIHRDLKSNNIFLHEDL---TVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGI  197 (276)
T ss_dssp             HHTTCCCSCCCGGGEEEETTS---SEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHH
T ss_pred             hcCCEeccccCHHHEEEcCCC---CEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHH
Confidence            456999999999999999887   7999999999876532   23456789999999999964   35889999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhcc-CCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTST-ELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~-~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      ++|||++|+.||.+.+....+..++... ..+........+++.+.+||.+||..||.+|||++|++++
T Consensus       198 ~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         198 VLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            9999999999999877665554444332 2222223345678999999999999999999999999877

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=2.1e-28  Score=248.17  Aligned_cols=147  Identities=27%  Similarity=0.447  Sum_probs=118.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCC-CCCCccccCCCcccChhhhccCCC-CcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTP-QDLADTLCGSPLYMAPEIIQNHKY-DAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~-~~~~~t~~GT~~YmAPEvl~~~~y-s~ksDIWSlGviL~   78 (568)
                      ||..|||||||||+|||++.++   .+||+|||+|+.... .......+||+.|+|||++....+ +.++|+||+||++|
T Consensus       118 LH~~~IiHrDiKpeNIl~~~~~---~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily  194 (298)
T d1gz8a_         118 CHSHRVLHRDLKPQNLLINTEG---AIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFA  194 (298)
T ss_dssp             HHHTTCCCSCCCGGGEEECTTS---CEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHH
T ss_pred             hhcCCEEccccCchheeecccC---cceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhh
Confidence            3557999999999999998876   699999999987654 334556789999999999877654 78899999999999


Q ss_pred             HHHhCCCCCCCCcHHHHHHHHHhccCCC-----------------CCC-------CcccccCHHHHHHHHHhhccCCCCC
Q 008370           79 QLVTGKPPFDGSNQLQLFQNILTSTELR-----------------FPP-------GAIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        79 ELltG~~PF~g~~~~~~~~~Il~~~~~~-----------------~p~-------~~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      +|++|+.||.+.+..+.+.++.......                 ++.       .....+++++++|+.+||..||.+|
T Consensus       195 ~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R  274 (298)
T d1gz8a_         195 EMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKR  274 (298)
T ss_dssp             HHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTS
T ss_pred             HHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHC
Confidence            9999999999998877776665321100                 000       0112456889999999999999999


Q ss_pred             CCHHHHHhchhHHHhH
Q 008370          135 ITFKEFFNHRFLGELR  150 (568)
Q Consensus       135 pTaeElL~Hpff~~~~  150 (568)
                      ||++|+++||||+.+.
T Consensus       275 ~t~~ell~H~ff~~~~  290 (298)
T d1gz8a_         275 ISAKAALAHPFFQDVT  290 (298)
T ss_dssp             CCHHHHHTSGGGTTCC
T ss_pred             cCHHHHhCCHhhccCC
Confidence            9999999999997653

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=9.6e-29  Score=254.15  Aligned_cols=137  Identities=21%  Similarity=0.332  Sum_probs=114.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+||||||||+|||++.++   .+||+|||+|+......   ...+.+||+.|||||++.+..|+.++|||||||++
T Consensus       180 LH~~~IiHRDlKp~Nill~~~~---~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil  256 (325)
T d1rjba_         180 LEFKSCVHRDLAARNVLVTHGK---VVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL  256 (325)
T ss_dssp             HHHTTEEETTCSGGGEEEETTT---EEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHhCCeeeccCchhccccccCC---eEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHH
Confidence            3556999999999999999887   79999999998765433   23456789999999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |||++ |++||.+.+..+.+.+++....   .+..+..+++++.+||.+||+.||++|||++||++|
T Consensus       257 ~emlt~g~~Pf~~~~~~~~~~~~~~~~~---~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         257 WEIFSLGVNPYPGIPVDANFYKLIQNGF---KMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             HHHTTTSCCSSTTCCCSHHHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhcCC---CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            99998 8999998776666666655432   122334678999999999999999999999999876

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.5e-28  Score=247.07  Aligned_cols=143  Identities=24%  Similarity=0.406  Sum_probs=114.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCC-----CCCccccCCCcccChhhhccC-CCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQ-----DLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~-----~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlG   74 (568)
                      ||..|||||||||+|||++.++   .+||+|||+++.....     ....+.+||+.|+|||++.+. .|+.++||||+|
T Consensus       133 lH~~~ivHrDlKp~NILl~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlG  209 (318)
T d3blha1         133 IHRNKILHRDMKAANVLITRDG---VLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAG  209 (318)
T ss_dssp             HHHTTEECCCCCGGGEEECTTS---CEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHH
T ss_pred             hccCCEEecCcCchheeecCCC---cEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCC
Confidence            3557999999999999999887   6999999999876532     233456899999999998765 689999999999


Q ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcc----------------------------cccCHHHHHHHHHh
Q 008370           75 AILFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAI----------------------------EELHPDCVDLCRCL  126 (568)
Q Consensus        75 viL~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~----------------------------~~ls~~~~dLI~~c  126 (568)
                      |++|||++|++||.+.+.......+...... +++...                            ...++.+++||.+|
T Consensus       210 vil~el~~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~m  288 (318)
T d3blha1         210 CIMAEMWTRSPIMQGNTEQHQLALISQLCGS-ITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKL  288 (318)
T ss_dssp             HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCC-CCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHH
T ss_pred             ceeeeHhhCCCCCCCCCHHHHHHHHHHhcCC-CChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHH
Confidence            9999999999999998877776655432111 110000                            01256788999999


Q ss_pred             hccCCCCCCCHHHHHhchhHH
Q 008370          127 LRQNPVERITFKEFFNHRFLG  147 (568)
Q Consensus       127 L~~dP~~RpTaeElL~Hpff~  147 (568)
                      |..||++|||++|+++||||+
T Consensus       289 L~~dP~~R~sa~elL~Hpff~  309 (318)
T d3blha1         289 LVLDPAQRIDSDDALNHDFFW  309 (318)
T ss_dssp             SCSSTTTSCCHHHHHHSGGGS
T ss_pred             CcCChhHCcCHHHHHcChhhc
Confidence            999999999999999999995

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.2e-28  Score=246.26  Aligned_cols=139  Identities=20%  Similarity=0.331  Sum_probs=118.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..+||||||||+|||++.++   .+||+|||+++.+....    .....+||+.|||||++.+..|+.++|||||||++
T Consensus       126 H~~~iiHrDlKp~Nill~~~~---~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l  202 (285)
T d1u59a_         126 EEKNFVHRDLAARNVLLVNRH---YAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTM  202 (285)
T ss_dssp             HHTTEECCCCSGGGEEEEETT---EEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred             HhCCeecCcCchhheeeccCC---ceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHH
Confidence            456999999999999999877   79999999999876433    23345789999999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHH---HhchhHH
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEF---FNHRFLG  147 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeEl---L~Hpff~  147 (568)
                      |||++ |+.||.+.+..+....+..+..+..|    ..+++++.+||.+||..||++|||+.++   |+|+|+.
T Consensus       203 ~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p----~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         203 WEALSYGQKPYKKMKGPEVMAFIEQGKRMECP----PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             HHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----CcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            99998 99999998888888777766554444    3678999999999999999999999988   5566663

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.94  E-value=5.9e-28  Score=242.81  Aligned_cols=143  Identities=27%  Similarity=0.432  Sum_probs=111.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      |..+||||||||+|||++.++   .+||+|||++....... ......|++.|+|||++.+ ..++.++||||+||++||
T Consensus       117 H~~~IvHrDiKp~NIll~~~~---~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~e  193 (286)
T d1ob3a_         117 HDRRVLHRDLKPQNLLINREG---ELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAE  193 (286)
T ss_dssp             HHTTCCCSCCCGGGEEECTTS---CEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHH
T ss_pred             ccCcEEecCCCCceeeEcCCC---CEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHH
Confidence            456999999999999999887   69999999998765432 3345678999999999875 456899999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCCC----C--------------------CCCcccccCHHHHHHHHHhhccCCCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTELR----F--------------------PPGAIEELHPDCVDLCRCLLRQNPVERI  135 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~~----~--------------------p~~~~~~ls~~~~dLI~~cL~~dP~~Rp  135 (568)
                      |++|+.||.+.+..+.+.++.......    +                    .......+++.+.+|+++||+.||++||
T Consensus       194 l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~  273 (286)
T d1ob3a_         194 MVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRI  273 (286)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSC
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCc
Confidence            999999999988877776654321000    0                    0111235678999999999999999999


Q ss_pred             CHHHHHhchhHH
Q 008370          136 TFKEFFNHRFLG  147 (568)
Q Consensus       136 TaeElL~Hpff~  147 (568)
                      |++|+++||||+
T Consensus       274 s~~ell~Hp~f~  285 (286)
T d1ob3a_         274 TAKQALEHAYFK  285 (286)
T ss_dssp             CHHHHHTSGGGG
T ss_pred             CHHHHhcCcccC
Confidence            999999999996

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=3.9e-28  Score=245.85  Aligned_cols=136  Identities=27%  Similarity=0.415  Sum_probs=106.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+||||||||+||||+.++   .+||+|||+|+......   .....+||+.|||||++.+..|+.++|||||||++
T Consensus       150 lH~~~ivHrDlKp~NILl~~~~---~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil  226 (299)
T d1ywna1         150 LASRKCIHRDLAARNILLSEKN---VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL  226 (299)
T ss_dssp             HHHTTCCCSCCCGGGEEECGGG---CEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHhCCCcCCcCCccceeECCCC---cEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHH
Confidence            3567999999999999999876   79999999998764332   33457899999999999999999999999999999


Q ss_pred             HHHHhC-CCCCCCCcHHHHHHHHHh-ccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVTG-KPPFDGSNQLQLFQNILT-STELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELltG-~~PF~g~~~~~~~~~Il~-~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |||++| .+||.+....+.+..++. +..+..    +..+++++.+||.+||..||.+|||++|+++|
T Consensus       227 ~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         227 WEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA----PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCC----CccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            999986 578887665554444443 333333    34678999999999999999999999999987

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.9e-28  Score=239.99  Aligned_cols=139  Identities=23%  Similarity=0.454  Sum_probs=107.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++.......  .....||+.|+|||++.+..|+.++|||||||++||
T Consensus       118 H~~~iiHrDlKp~Nill~~~~---~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~e  194 (263)
T d1sm2a_         118 EEACVIHRDLAARNCLVGENQ---VIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWE  194 (263)
T ss_dssp             HHTTCCCTTCSGGGEEECGGG---CEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             hccceeecccchhheeecCCC---CeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHH
Confidence            456899999999999999877   699999999987654332  234678999999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++ |.+||.+.+..+.+..+........|    ...++++.+|+.+||+.||.+|||++|+++|  ++++
T Consensus       195 l~t~~~~~~~~~~~~~~~~~i~~~~~~~~p----~~~~~~l~~li~~cl~~~p~~Rps~~~il~~--L~~i  259 (263)
T d1sm2a_         195 VFSEGKIPYENRSNSEVVEDISTGFRLYKP----RLASTHVYQIMNHCWKERPEDRPAFSRLLRQ--LAEI  259 (263)
T ss_dssp             HHTTSCCTTCSCCHHHHHHHHHHTCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH--HHHH
T ss_pred             HHHCCCCCCCCCCHHHHHHHHHhcCCCCCc----cccCHHHHHHHHHHccCCHhHCcCHHHHHHH--HHHH
Confidence            999 67778888887788777765444333    3568899999999999999999999999887  5444

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.94  E-value=8.8e-28  Score=244.38  Aligned_cols=136  Identities=23%  Similarity=0.341  Sum_probs=105.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCC------ccccCCCcccChhhhccCCCCcccchhhHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLA------DTLCGSPLYMAPEIIQNHKYDAKADLWSVG   74 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~------~t~~GT~~YmAPEvl~~~~ys~ksDIWSlG   74 (568)
                      ||..+||||||||+||||+.++   ++||+|||+++.+......      ....||+.|||||++.+..|+.++||||||
T Consensus       144 LH~~~iiHrDlKp~NILl~~~~---~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~G  220 (299)
T d1jpaa_         144 LADMNYVHRDLAARNILVNSNL---VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYG  220 (299)
T ss_dssp             HHHTTCCCSCCCGGGEEECTTC---CEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHH
T ss_pred             HhhCCCccCccccceEEECCCC---cEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccch
Confidence            3557999999999999999877   7999999999876543221      124578999999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           75 AILFQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        75 viL~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++|||++ |++||.+.+..+....+.....++.|    ..+++.+.+|+.+||..||.+|||+.|++++
T Consensus       221 vvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         221 IVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPP----MDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             HHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC----ccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            99999998 89999999988888877765444333    3678899999999999999999999999765

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.7e-27  Score=244.49  Aligned_cols=145  Identities=30%  Similarity=0.456  Sum_probs=117.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhcc-CCCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQN-HKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~-~~ys~ksDIWSlGviL~E   79 (568)
                      ||..|||||||||+|||++.++   .+||+|||+|+....  .....+||+.|+|||++.+ ..++.++||||+||++|+
T Consensus       137 LH~~~IiHrDiKp~NIL~~~~~---~~kl~Dfg~a~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~e  211 (346)
T d1cm8a_         137 IHAAGIIHRDLKPGNLAVNEDC---ELKILDFGLARQADS--EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAE  211 (346)
T ss_dssp             HHHTTEECCCCCGGGEEECTTC---CEEECCCTTCEECCS--SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHH
T ss_pred             HHhCCCcccccCcchhhccccc---ccccccccceeccCC--ccccccccccccCHHHHcCCCCCCccchhhcchHHHHH
Confidence            3557999999999999999887   699999999987653  3456789999999999876 456889999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCC----------------------CCC----CCcccccCHHHHHHHHHhhccCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTEL----------------------RFP----PGAIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~----------------------~~p----~~~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      |++|++||.+.+..+.+..+......                      ...    ......+++++.+||.+||..||.+
T Consensus       212 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~  291 (346)
T d1cm8a_         212 MITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQ  291 (346)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTT
T ss_pred             HHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhH
Confidence            99999999998876665544321100                      011    1122456889999999999999999


Q ss_pred             CCCHHHHHhchhHHHhH
Q 008370          134 RITFKEFFNHRFLGELR  150 (568)
Q Consensus       134 RpTaeElL~Hpff~~~~  150 (568)
                      |||++|+++||||+.+.
T Consensus       292 R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         292 RVTAGEALAHPYFESLH  308 (346)
T ss_dssp             SCCHHHHHHSGGGTTTC
T ss_pred             CcCHHHHhcChhhCcCC
Confidence            99999999999998764

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.94  E-value=1.5e-27  Score=244.35  Aligned_cols=149  Identities=19%  Similarity=0.341  Sum_probs=116.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccC-CCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~E   79 (568)
                      ||..|||||||||+|||++.++.  .+||+|||+|+...........+||+.|+|||++.+. .|+.++||||+||++|+
T Consensus       145 LH~~gIvHrDiKp~NILi~~~~~--~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e  222 (328)
T d3bqca1         145 CHSMGIMHRDVKPHNVMIDHEHR--KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS  222 (328)
T ss_dssp             HHHTTEECCCCSGGGEEEETTTT--EEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHH
T ss_pred             HhhcccccccccccceEEcCCCC--eeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHH
Confidence            35679999999999999987653  6999999999988776677788999999999998765 57999999999999999


Q ss_pred             HHhCCCCCCCCc-HHHHHHHHHhc------------cCC--------------------CCCCCcccccCHHHHHHHHHh
Q 008370           80 LVTGKPPFDGSN-QLQLFQNILTS------------TEL--------------------RFPPGAIEELHPDCVDLCRCL  126 (568)
Q Consensus        80 LltG~~PF~g~~-~~~~~~~Il~~------------~~~--------------------~~p~~~~~~ls~~~~dLI~~c  126 (568)
                      |++|+.||.... .......+...            ...                    ..+......+++++++||++|
T Consensus       223 ~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~m  302 (328)
T d3bqca1         223 MIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKL  302 (328)
T ss_dssp             HHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHH
T ss_pred             hccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHH
Confidence            999999997654 22222222110            000                    011112245678999999999


Q ss_pred             hccCCCCCCCHHHHHhchhHHHhHH
Q 008370          127 LRQNPVERITFKEFFNHRFLGELRQ  151 (568)
Q Consensus       127 L~~dP~~RpTaeElL~Hpff~~~~~  151 (568)
                      |..||.+|||++|+|+||||..+.+
T Consensus       303 L~~dP~~R~ta~e~L~Hp~F~~v~~  327 (328)
T d3bqca1         303 LRYDHQSRLTAREAMEHPYFYTVVK  327 (328)
T ss_dssp             SCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred             ccCChhHCcCHHHHhcCcccCCCCC
Confidence            9999999999999999999976643

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=9.7e-28  Score=240.25  Aligned_cols=139  Identities=25%  Similarity=0.435  Sum_probs=108.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..+||||||||+||+++.++   .+||+|||+|+.+....  .....+||+.|+|||++.+..|+.++|||||||++||
T Consensus       125 H~~~iiHrDlKp~NIll~~~~---~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e  201 (273)
T d1mp8a_         125 ESKRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWE  201 (273)
T ss_dssp             HHTTCCCSCCSGGGEEEEETT---EEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred             cccCeeccccchhheeecCCC---cEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHH
Confidence            456999999999999999887   79999999998765432  2344678999999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      |++ |.+||.+.+..+.+.++......++|    ..+++.+.+||.+||..||.+|||++|+++|  +..+
T Consensus       202 ~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~--L~~i  266 (273)
T d1mp8a_         202 ILMHGVKPFQGVKNNDVIGRIENGERLPMP----PNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ--LSTI  266 (273)
T ss_dssp             HHTTSCCTTTTCCGGGHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH--HHHH
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH--HHHH
Confidence            998 89999999888888888766544444    3678999999999999999999999999877  4444

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.1e-27  Score=245.22  Aligned_cols=136  Identities=25%  Similarity=0.333  Sum_probs=113.6

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC---CccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL---ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~---~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      ||..+||||||||+|||++.++   .+||+|||+|+.......   .....||+.|||||++.+..|+.++|||||||++
T Consensus       127 LH~~~iiHrDlKp~NIll~~~~---~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil  203 (317)
T d1xkka_         127 LEDRRLVHRDLAARNVLVKTPQ---HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTV  203 (317)
T ss_dssp             HHHTTCCCSCCCGGGEEEEETT---EEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred             HHHcCcccCcchhhcceeCCCC---CeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHH
Confidence            3567999999999999999887   799999999987654332   2345689999999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |||+| |.+||.+.+..+....+..+..+..|    ..+++.+.+|+.+||..||.+|||+.|++.|
T Consensus       204 ~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p----~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         204 WELMTFGSKPYDGIPASEISSILEKGERLPQP----PICTIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             HHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCC----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCC----cccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence            99998 89999988877777666655444443    3678899999999999999999999999988

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.5e-27  Score=236.24  Aligned_cols=135  Identities=21%  Similarity=0.362  Sum_probs=116.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..||+||||||+|||++.++   .+||+|||+++.+.....  .....||+.|+|||++.+..|+.++|||||||++||
T Consensus       117 H~~~iiH~dlk~~Nill~~~~---~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~e  193 (258)
T d1k2pa_         117 ESKQFLHRDLAARNCLVNDQG---VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWE  193 (258)
T ss_dssp             HHTTBCCSCCSGGGEEECTTC---CEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             hhcCcccccccceeEEEcCCC---cEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHh
Confidence            557999999999999999876   799999999987654432  223678999999999999999999999999999999


Q ss_pred             HHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           80 LVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        80 Llt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      |++ |+.||.+.+..++..++........|    ...++.+.+||.+||+.||.+|||++++++|
T Consensus       194 l~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p----~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         194 IYSLGKMPYERFTNSETAEHIAQGLRLYRP----HLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             HHTTSCCTTTTSCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCCCCCCCCHHHHHHHHHhCCCCCCc----ccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            998 89999999988888888765443333    3677899999999999999999999999987

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=8.7e-28  Score=247.02  Aligned_cols=148  Identities=25%  Similarity=0.447  Sum_probs=116.0

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccC--CCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNH--KYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~--~ys~ksDIWSlGviL   77 (568)
                      |..+||||||||+|||++.++   .+||+|||+++.+....  ...+..|++.|++||.+.+.  .++.++||||+||++
T Consensus       146 H~~~ivHrDiKp~Nill~~~~---~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iL  222 (322)
T d1vzoa_         146 HKLGIIYRDIKLENILLDSNG---HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLM  222 (322)
T ss_dssp             HHTTCCCCCCCGGGEEECTTS---CEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHH
T ss_pred             hcCCEEeccCCccceeecCCC---CEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHH
Confidence            456999999999999999887   69999999998765332  34567899999999999754  467889999999999


Q ss_pred             HHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-----CHHHHHhchhHHHhHHh
Q 008370           78 FQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-----TFKEFFNHRFLGELRQT  152 (568)
Q Consensus        78 ~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-----TaeElL~Hpff~~~~~~  152 (568)
                      |+|++|+.||.+.+..+....+..... ..++..+..+++++.+||.+||..||.+||     |++|+++||||+.+.+.
T Consensus       223 yelltG~~PF~~~~~~~~~~~i~~~~~-~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~~~  301 (322)
T d1vzoa_         223 YELLTGASPFTVDGEKNSQAEISRRIL-KSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWD  301 (322)
T ss_dssp             HHHHHSSCTTSCTTSCCCHHHHHHHHH-HCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHH
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHhcc-cCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCCCHH
Confidence            999999999987654433333332211 111223346899999999999999999999     58999999999887665


Q ss_pred             h
Q 008370          153 V  153 (568)
Q Consensus       153 ~  153 (568)
                      .
T Consensus       302 ~  302 (322)
T d1vzoa_         302 D  302 (322)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.1e-27  Score=238.13  Aligned_cols=134  Identities=22%  Similarity=0.347  Sum_probs=104.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..+||||||||+||||+.++   .+||+|||+++.+....    ......||+.|||||++.+..|+.++|||||||++
T Consensus       127 H~~~iiHrDlKp~NILl~~~~---~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil  203 (283)
T d1mqba_         127 ANMNYVHRDLAARNILVNSNL---VCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVM  203 (283)
T ss_dssp             HHTTCCCSCCCGGGEEECTTC---CEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHH
T ss_pred             cccccccCccccceEEECCCC---eEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHH
Confidence            456999999999999999877   79999999998765332    22235689999999999999999999999999999


Q ss_pred             HHHHhC-CCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           78 FQLVTG-KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        78 ~ELltG-~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      |||++| .+||.+.+..+.+..+..+..++.|    ..++..+.+|+.+||..||.+|||+.|+++
T Consensus       204 ~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         204 WEVMTYGERPYWELSNHEVMKAINDGFRLPTP----MDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC----TTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHhCCCCccccCCHHHHHHHHhccCCCCCc----hhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            999995 5556666777777666655444333    367889999999999999999999999976

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=3.8e-27  Score=243.80  Aligned_cols=146  Identities=29%  Similarity=0.482  Sum_probs=115.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhc-cCCCCcccchhhHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQ-NHKYDAKADLWSVGA   75 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~-~~~ys~ksDIWSlGv   75 (568)
                      ||..|||||||||+|||++.++   .+||+|||+++......    .....+||+.|+|||++. ...|+.++||||+||
T Consensus       125 LH~~~iiHRDIKp~NILl~~~~---~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~  201 (345)
T d1pmea_         125 IHSANVLHRDLKPSNLLLNTTC---DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGC  201 (345)
T ss_dssp             HHHTTEECCCCCGGGEEECTTC---CEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHH
T ss_pred             HHHCCCcCCCCCcceEEECCCC---CEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCc
Confidence            3557999999999999999876   79999999998764322    345678999999999984 456788999999999


Q ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHhccCC-------------------CCCC-------CcccccCHHHHHHHHHhhcc
Q 008370           76 ILFQLVTGKPPFDGSNQLQLFQNILTSTEL-------------------RFPP-------GAIEELHPDCVDLCRCLLRQ  129 (568)
Q Consensus        76 iL~ELltG~~PF~g~~~~~~~~~Il~~~~~-------------------~~p~-------~~~~~ls~~~~dLI~~cL~~  129 (568)
                      ++|+|++|+.||.+.+..+...........                   ..+.       .....+++++++|+.+||..
T Consensus       202 il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~  281 (345)
T d1pmea_         202 ILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTF  281 (345)
T ss_dssp             HHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCS
T ss_pred             eehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccC
Confidence            999999999999988766555443321000                   0000       11235678899999999999


Q ss_pred             CCCCCCCHHHHHhchhHHHh
Q 008370          130 NPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       130 dP~~RpTaeElL~Hpff~~~  149 (568)
                      ||.+|||++|+++||||...
T Consensus       282 dP~~R~ta~e~L~hpf~~~~  301 (345)
T d1pmea_         282 NPHKRIEVEQALAHPYLEQY  301 (345)
T ss_dssp             STTTSCCHHHHHTSGGGTTT
T ss_pred             ChhHCcCHHHHhcCHhhccC
Confidence            99999999999999999654

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.93  E-value=5.6e-27  Score=234.93  Aligned_cols=142  Identities=25%  Similarity=0.435  Sum_probs=110.3

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      ||..|||||||||+|||++.++   .+||+|||+++......    ...+.+||+.|||||++.+..|+.++||||+||+
T Consensus       127 lH~~~iiHrDiKP~NIll~~~~---~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvi  203 (277)
T d1o6ya_         127 SHQNGIIHRDVKPANIMISATN---AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCV  203 (277)
T ss_dssp             HHHTTEECCCCSGGGEEEETTS---CEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             HHhCCccCccccCcccccCccc---cceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHH
Confidence            3557999999999999999887   68999999988654322    3456789999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCC-CHHHHHhchhHH
Q 008370           77 LFQLVTGKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERI-TFKEFFNHRFLG  147 (568)
Q Consensus        77 L~ELltG~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~Rp-TaeElL~Hpff~  147 (568)
                      +|+|++|++||.+.+..+.+.+++.... ..+......+++.+.+||.+||..||.+|| |++++ .|+|.+
T Consensus       204 lyelltG~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l-~~~l~r  273 (277)
T d1o6ya_         204 LYEVLTGEPPFTGDSPVSVAYQHVREDP-IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM-RADLVR  273 (277)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHCCC-CCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHH-HHHHHH
T ss_pred             HHHHHhCCCCCCCcCHHHHHHHHHhcCC-CCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHH-HHHHHH
Confidence            9999999999999998888877776532 223334457889999999999999999999 56554 577664

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=3.4e-27  Score=239.70  Aligned_cols=133  Identities=24%  Similarity=0.397  Sum_probs=112.1

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+||||||||+|||++.++   .+||+|||+|+.+....   ...+.+||+.|+|||++.+..|+.++|||||||++|
T Consensus       157 H~~~ivHrDlKp~NILld~~~---~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~  233 (301)
T d1lufa_         157 SERKFVHRDLATRNCLVGENM---VVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLW  233 (301)
T ss_dssp             HHTTCCCSCCSGGGEEECGGG---CEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             ccCCeEeeEEcccceEECCCC---cEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHH
Confidence            456999999999999999876   79999999998664332   334578899999999999999999999999999999


Q ss_pred             HHHhCC-CCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           79 QLVTGK-PPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        79 ELltG~-~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      ||++|. +||.+.+..+....+.....+..|    ..+++++.+||.+||+.+|++|||+.||+
T Consensus       234 ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p----~~~~~~~~~li~~cl~~~P~~RPt~~ev~  293 (301)
T d1lufa_         234 EIFSYGLQPYYGMAHEEVIYYVRDGNILACP----ENCPLELYNLMRLCWSKLPADRPSFCSIH  293 (301)
T ss_dssp             HHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHccCCCCCCCCCHHHHHHHHHcCCCCCCC----ccchHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            999984 789999988888887766443333    46788999999999999999999999994

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=5.3e-27  Score=243.59  Aligned_cols=147  Identities=23%  Similarity=0.366  Sum_probs=109.0

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      ||..||+||||||+|||++.++   .+|++|||+++...........+||+.|+|||++.+..++.++||||+||++|+|
T Consensus       135 LH~~giiHrDlKP~Nil~~~~~---~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~el  211 (355)
T d2b1pa1         135 LHSAGIIHRDLKPSNIVVKSDC---TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEM  211 (355)
T ss_dssp             HHHTTCCCSCCCGGGEEECTTC---CEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHH
T ss_pred             hhhcccccccCCcccccccccc---ceeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHH
Confidence            3567999999999999999877   6899999999887766666778899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHHHHHHHHHhccCCC---------------------CCCC----------------cccccCHHHHHHH
Q 008370           81 VTGKPPFDGSNQLQLFQNILTSTELR---------------------FPPG----------------AIEELHPDCVDLC  123 (568)
Q Consensus        81 ltG~~PF~g~~~~~~~~~Il~~~~~~---------------------~p~~----------------~~~~ls~~~~dLI  123 (568)
                      ++|++||.+.+......++.......                     ....                .....++++++||
T Consensus       212 l~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll  291 (355)
T d2b1pa1         212 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLL  291 (355)
T ss_dssp             HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHH
T ss_pred             hhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHH
Confidence            99999999988776666554321110                     0000                0112356889999


Q ss_pred             HHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370          124 RCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus       124 ~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      ++||..||++|||++|+|+||||+...
T Consensus       292 ~~mL~~dP~~R~ta~elL~Hpw~~~~~  318 (355)
T d2b1pa1         292 SKMLVIDPAKRISVDDALQHPYINVWY  318 (355)
T ss_dssp             HHHSCSSTTTSCCHHHHHTSTTTGGGC
T ss_pred             HHHCcCChhHCcCHHHHhcCcccCCCC
Confidence            999999999999999999999998754

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=5.6e-27  Score=237.04  Aligned_cols=140  Identities=23%  Similarity=0.366  Sum_probs=110.5

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCC--CccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDL--ADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~--~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      ||..+||||||||+||||+.++   .+||+|||+|+.......  .....|++.|+|||++.+..|+.++|||||||++|
T Consensus       131 LH~~~iiHrDlKp~NILl~~~~---~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~  207 (287)
T d1opja_         131 LEKKNFIHRDLAARNCLVGENH---LVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLW  207 (287)
T ss_dssp             HHHTTCCCSCCSGGGEEECGGG---CEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHH
T ss_pred             HHHCCcccCccccCeEEECCCC---cEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHH
Confidence            3557999999999999999877   799999999987654332  22345889999999999999999999999999999


Q ss_pred             HHHhCCCC-CCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           79 QLVTGKPP-FDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        79 ELltG~~P-F~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ||++|..| |.+.+..+....+.....+..    +..+++++.+|+.+||..||.+|||++|+++  +|..+
T Consensus       208 ell~~~~p~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~--~L~~~  273 (287)
T d1opja_         208 EIATYGMSPYPGIDLSQVYELLEKDYRMER----PEGCPEKVYELMRACWQWNPSDRPSFAEIHQ--AFETM  273 (287)
T ss_dssp             HHHTTSCCSSTTCCHHHHHHHHHTTCCCCC----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH--HHHHT
T ss_pred             HHHhCCCCCCCcchHHHHHHHHhcCCCCCC----CccchHHHHHHHHHHcCCCHhHCcCHHHHHH--HHHHH
Confidence            99996555 555555555554444333333    3467899999999999999999999999954  45443

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=2.3e-26  Score=230.54  Aligned_cols=145  Identities=25%  Similarity=0.404  Sum_probs=112.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-CCccccCCCcccChhhhccCC-CCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-LADTLCGSPLYMAPEIIQNHK-YDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-~~~t~~GT~~YmAPEvl~~~~-ys~ksDIWSlGviL~E   79 (568)
                      |..+||||||||+|||++.++   .+||+|||.++...... ......+++.|+|||++.... ++.++||||+||++||
T Consensus       118 H~~~IvHrDiKP~NIli~~~~---~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~e  194 (292)
T d1unla_         118 HSRNVLHRDLKPQNLLINRNG---ELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAE  194 (292)
T ss_dssp             HHTTEECCCCSGGGEEECTTC---CEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHH
T ss_pred             hcCCEeeecccCcccccccCC---ceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHH
Confidence            456999999999999999877   69999999999876443 333456778899999987664 6889999999999999


Q ss_pred             HHhCCCCC-CCCcHHHHHHHHHhccCCC------------------------CCCCcccccCHHHHHHHHHhhccCCCCC
Q 008370           80 LVTGKPPF-DGSNQLQLFQNILTSTELR------------------------FPPGAIEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        80 LltG~~PF-~g~~~~~~~~~Il~~~~~~------------------------~p~~~~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      |++|+.|| .+.+..+.+.++.......                        ........+++.+.+|+.+||+.||.+|
T Consensus       195 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R  274 (292)
T d1unla_         195 LANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQR  274 (292)
T ss_dssp             HTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGS
T ss_pred             HhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHC
Confidence            99999885 4555555555543211100                        0011223567899999999999999999


Q ss_pred             CCHHHHHhchhHHHh
Q 008370          135 ITFKEFFNHRFLGEL  149 (568)
Q Consensus       135 pTaeElL~Hpff~~~  149 (568)
                      ||++|+++||||+++
T Consensus       275 ~sa~e~L~Hp~f~~~  289 (292)
T d1unla_         275 ISAEEALQHPYFSDF  289 (292)
T ss_dssp             CCHHHHTTSGGGSSC
T ss_pred             cCHHHHhcChhhcCC
Confidence            999999999999754

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.6e-26  Score=235.69  Aligned_cols=135  Identities=27%  Similarity=0.388  Sum_probs=113.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..+||||||||+|||++.++   .+||+|||+++...........+||+.|+|||.+.+..|+.++|||||||++|||+
T Consensus       144 H~~~iiHrDlkp~NIL~~~~~---~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell  220 (309)
T d1fvra_         144 SQKQFIHRDLAARNILVGENY---VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV  220 (309)
T ss_dssp             HHTTEECSCCSGGGEEECGGG---CEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred             hcCCccccccccceEEEcCCC---ceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHH
Confidence            456999999999999999877   69999999998766554455678999999999999999999999999999999999


Q ss_pred             hC-CCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhc
Q 008370           82 TG-KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNH  143 (568)
Q Consensus        82 tG-~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~H  143 (568)
                      +| .+||.+.+..+.+..+..+..+..|    ..+++++.+||.+||..||++|||++|+++|
T Consensus       221 ~~~~~p~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         221 SLGGTPYCGMTCAELYEKLPQGYRLEKP----LNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             TTSCCTTTTCCHHHHHHHGGGTCCCCCC----TTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hcCCCCCCCCCHHHHHHHHHhcCCCCCC----ccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            96 5689888888888877665444333    4678999999999999999999999999887

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.2e-26  Score=234.69  Aligned_cols=138  Identities=25%  Similarity=0.371  Sum_probs=108.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--CCccccCCCcccChhhhccCCCCcccchhhHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQ   79 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~E   79 (568)
                      |..+|+||||||+||||+.++   .+||+|||+++......  ......||+.|+|||++....++.++|||||||++||
T Consensus       130 H~~~ivH~DlKp~NIll~~~~---~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~e  206 (285)
T d1fmka3         130 ERMNYVHRDLRAANILVGENL---VCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE  206 (285)
T ss_dssp             HHTTCCCSCCSGGGEEECGGG---CEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             hhhheecccccceEEEECCCC---cEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHH
Confidence            556999999999999999876   69999999998764333  2334678999999999999999999999999999999


Q ss_pred             HHhC-CCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh--chhH
Q 008370           80 LVTG-KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN--HRFL  146 (568)
Q Consensus        80 LltG-~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~--Hpff  146 (568)
                      |++| .+||.+....+.+..+......+.+    ..+++.+.+||.+||+.||++||++++|+.  |+||
T Consensus       207 l~t~~~p~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~  272 (285)
T d1fmka3         207 LTTKGRVPYPGMVNREVLDQVERGYRMPCP----PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  272 (285)
T ss_dssp             HHTTTCCSSTTCCHHHHHHHHHTTCCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHhcCCCCCC----cccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhh
Confidence            9995 5666777777777777655443333    467889999999999999999999999976  5555

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.1e-26  Score=231.14  Aligned_cols=134  Identities=27%  Similarity=0.415  Sum_probs=111.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC----CCccccCCCcccChhhhccCCCCcccchhhHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAIL   77 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL   77 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++.+....    ......|++.|+|||++.+..++.++|||||||++
T Consensus       128 H~~~iiHrDikp~NIll~~~~---~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil  204 (273)
T d1u46a_         128 ESKRFIHRDLAARNLLLATRD---LVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTL  204 (273)
T ss_dssp             HHTTEECSCCCGGGEEEEETT---EEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHH
T ss_pred             hhCCEeeeeecHHHhcccccc---ceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHH
Confidence            456999999999999999877   79999999999875432    23345678899999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           78 FQLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        78 ~ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      |||++ |+.||.+.+..+...++......   +..+..+++.+.+||.+||..||.+|||+.+++
T Consensus       205 ~emlt~G~~Pf~~~~~~~~~~~i~~~~~~---~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~  266 (273)
T d1u46a_         205 WEMFTYGQEPWIGLNGSQILHKIDKEGER---LPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALR  266 (273)
T ss_dssp             HHHHTTSCCTTTTCCHHHHHHHHHTSCCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHhCCCCCCCCcCHHHHHHHHHhCCCC---CCCcccccHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            99998 89999999999888888765321   123346789999999999999999999999985

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.92  E-value=1.9e-26  Score=233.09  Aligned_cols=145  Identities=16%  Similarity=0.177  Sum_probs=108.2

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC--------CCccccCCCcccChhhhccCCCCcccchhhH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD--------LADTLCGSPLYMAPEIIQNHKYDAKADLWSV   73 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~--------~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSl   73 (568)
                      |..|||||||||+|||++..+....+||+|||+|+.+....        ...+.+||+.|||||++.+..|+.++|||||
T Consensus       120 H~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl  199 (299)
T d1ckia_         120 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESL  199 (299)
T ss_dssp             HHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHH
T ss_pred             HHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEec
Confidence            55799999999999999766555579999999999765322        2345689999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCCcHHHHHHHHHhcc--CCCCC-CCcccccCHHHHHHHHHhhccCCCCCCCHHHH---HhchhH
Q 008370           74 GAILFQLVTGKPPFDGSNQLQLFQNILTST--ELRFP-PGAIEELHPDCVDLCRCLLRQNPVERITFKEF---FNHRFL  146 (568)
Q Consensus        74 GviL~ELltG~~PF~g~~~~~~~~~Il~~~--~~~~p-~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeEl---L~Hpff  146 (568)
                      ||++|||++|+.||.+.........+....  ....+ +.....+++++.+||.+||..+|.+||+++++   ++|+|.
T Consensus       200 G~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         200 GYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             HHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence            999999999999998765443322221110  11111 11234678899999999999999999999865   555544

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=4.5e-26  Score=231.28  Aligned_cols=134  Identities=28%  Similarity=0.455  Sum_probs=114.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+||||||||+|||++.++   .+||+|||+++......   .....+||+.|+|||++.+..|+.++|||||||++|
T Consensus       152 H~~~ivHrDiKp~NiLl~~~~---~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~  228 (299)
T d1fgka_         152 ASKKCIHRDLAARNVLVTEDN---VMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLW  228 (299)
T ss_dssp             HHTTCCCSCCSGGGEEECTTC---CEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             hhCCEEeeeecccceeecCCC---CeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHH
Confidence            456999999999999999887   69999999998764332   334567899999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ||++ |.+||.+.+..+.+..+..+..+..|    ..+++.+.+||.+||+.||.+|||+.||++
T Consensus       229 ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p----~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         229 EIFTLGGSPYPGVPVEELFKLLKEGHRMDKP----SNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             HHHTTSCCSSTTCCHHHHHHHHHTTCCCCCC----SSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HhccCCCCCCCCCCHHHHHHHHHcCCCCCCC----ccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            9998 79999988888777766655444433    467899999999999999999999999976

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=5.1e-26  Score=231.95  Aligned_cols=134  Identities=24%  Similarity=0.404  Sum_probs=114.8

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+||||||||+|||++.++   .+||+|||+++.+....   .....+||+.|+|||.+.+..++.++|||||||++|
T Consensus       150 H~~~ivHrDlk~~NiLld~~~---~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~  226 (308)
T d1p4oa_         150 NANKFVHRDLAARNCMVAEDF---TVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW  226 (308)
T ss_dssp             HHTTCBCSCCSGGGEEECTTC---CEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             hhCCeeeceEcCCceeecCCc---eEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHH
Confidence            456899999999999999877   79999999998764332   234457899999999999999999999999999999


Q ss_pred             HHHhC-CCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVTG-KPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELltG-~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ||++| .+||.+.+..+.+..+.....+..|    ..+++.+.++|.+||+.+|.+|||++++++
T Consensus       227 El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p----~~~~~~l~~li~~cl~~~P~~RPs~~~il~  287 (308)
T d1p4oa_         227 EIATLAEQPYQGLSNEQVLRFVMEGGLLDKP----DNCPDMLFELMRMCWQYNPKMRPSFLEIIS  287 (308)
T ss_dssp             HHHHTSCCTTTTSCHHHHHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHhCCCCCCc----ccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99997 5889999998888888766544333    367889999999999999999999999987

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=2.5e-26  Score=236.70  Aligned_cols=144  Identities=29%  Similarity=0.445  Sum_probs=112.9

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccC-CCCcccchhhHHHHHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNH-KYDAKADLWSVGAILFQ   79 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~-~ys~ksDIWSlGviL~E   79 (568)
                      ||..|||||||||+|||++.++   .+|++|||++.....  ...+.+||+.|+|||++.+. .++.++||||+||++|+
T Consensus       137 LH~~giiHrDiKp~NILi~~~~---~~kl~dfg~a~~~~~--~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~  211 (348)
T d2gfsa1         137 IHSADIIHRDLKPSNLAVNEDC---ELKILDFGLARHTDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAE  211 (348)
T ss_dssp             HHHTTCCCCCCCGGGEEECTTC---CEEECCC----CCTG--GGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHH
T ss_pred             HHhCCCcccccCCccccccccc---cccccccchhcccCc--ccccccccccccCchhhcCCccCCcccchhhhhHHHHH
Confidence            3567999999999999999887   699999999976532  34567899999999987765 46889999999999999


Q ss_pred             HHhCCCCCCCCcHHHHHHHHHhccCC----------------------CCCCC----cccccCHHHHHHHHHhhccCCCC
Q 008370           80 LVTGKPPFDGSNQLQLFQNILTSTEL----------------------RFPPG----AIEELHPDCVDLCRCLLRQNPVE  133 (568)
Q Consensus        80 LltG~~PF~g~~~~~~~~~Il~~~~~----------------------~~p~~----~~~~ls~~~~dLI~~cL~~dP~~  133 (568)
                      |++|++||.+.+.......+......                      ..+..    ....+++++++||.+||..||.+
T Consensus       212 ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~  291 (348)
T d2gfsa1         212 LLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDK  291 (348)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGG
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhh
Confidence            99999999998877776666543211                      00100    11346789999999999999999


Q ss_pred             CCCHHHHHhchhHHHh
Q 008370          134 RITFKEFFNHRFLGEL  149 (568)
Q Consensus       134 RpTaeElL~Hpff~~~  149 (568)
                      |||++|+++||||++.
T Consensus       292 R~ta~elL~Hp~f~~~  307 (348)
T d2gfsa1         292 RITAAQALAHAYFAQY  307 (348)
T ss_dssp             SCCHHHHHTSGGGTTT
T ss_pred             CcCHHHHhcCHhhCCC
Confidence            9999999999999765

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=1.2e-25  Score=224.65  Aligned_cols=137  Identities=21%  Similarity=0.397  Sum_probs=109.5

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQLV   81 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~ELl   81 (568)
                      |..+||||||||+|||++.++   .+||+|||+++.....  .....+++.|+|||++.+..|+.++|||||||++|||+
T Consensus       120 H~~~ivH~dlkp~Nil~~~~~---~~kl~dfg~s~~~~~~--~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~  194 (262)
T d1byga_         120 EGNNFVHRDLAARNVLVSEDN---VAKVSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY  194 (262)
T ss_dssp             HHTTCCCSCCSGGGEEECTTS---CEEECCCCC--------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             ccCceeccccchHhheecCCC---CEeecccccceecCCC--CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHH
Confidence            456999999999999999887   7999999999875432  34567899999999999999999999999999999999


Q ss_pred             h-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370           82 T-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus        82 t-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      + |++||.+.+..+....+..+..+.+|    ..+++.+.+|+.+||..||.+|||+.+++++  ++.+
T Consensus       195 t~~~~p~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~--L~~i  257 (262)
T d1byga_         195 SFGRVPYPRIPLKDVVPRVEKGYKMDAP----DGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ--LEHI  257 (262)
T ss_dssp             TTSCCSCTTSCGGGHHHHHTTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH--HHHH
T ss_pred             HCCCCCCCCCCHHHHHHHHHcCCCCCCC----ccCCHHHHHHHHHHcccCHhHCcCHHHHHHH--HHHH
Confidence            8 79999988888888777665444444    3678999999999999999999999999764  4444

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=2.7e-25  Score=227.21  Aligned_cols=140  Identities=21%  Similarity=0.313  Sum_probs=109.9

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhccCCCCcccchhhHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAI   76 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGvi   76 (568)
                      |..+|+||||||+|||++.++   .+||+|||+++......     ......||+.|+|||++....++.++|||||||+
T Consensus       147 H~~~iiHrDLK~~NILl~~~~---~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGiv  223 (311)
T d1r0pa_         147 ASKKFVHRDLAARNCMLDEKF---TVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL  223 (311)
T ss_dssp             HHTTCCCSCCSGGGEEECTTC---CEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             cccCcccCCccHHhEeECCCC---CEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHH
Confidence            557999999999999998776   79999999998765432     1223568999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCC-CcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHhchhHHHhH
Q 008370           77 LFQLVTGKPPFDG-SNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFNHRFLGELR  150 (568)
Q Consensus        77 L~ELltG~~PF~g-~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~~  150 (568)
                      +|||++|..||.. .+..+....+..+..+..|    ..+++.+.+||.+||..||++||++.||++|  +..+.
T Consensus       224 l~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p----~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~--L~~i~  292 (311)
T d1r0pa_         224 LWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP----EYCPDPLYEVMLKCWHPKAEMRPSFSELVSR--ISAIF  292 (311)
T ss_dssp             HHHHHTTSCCSCC------CHHHHHTTCCCCCC----TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH--HHHHH
T ss_pred             HHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCc----ccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH--HHHHH
Confidence            9999997766654 3444555556555444333    3678899999999999999999999999887  54443

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.5e-25  Score=225.84  Aligned_cols=135  Identities=26%  Similarity=0.409  Sum_probs=111.6

Q ss_pred             CCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC---CCccccCCCcccChhhhccCCCCcccchhhHHHHHH
Q 008370            2 CYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD---LADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILF   78 (568)
Q Consensus         2 ~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~---~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~   78 (568)
                      |..+||||||||+|||++.++   .+||+|||+++......   .....+||+.|+|||++.+..++.++|||||||++|
T Consensus       162 H~~~ivHrDLKp~NIl~~~~~---~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~  238 (311)
T d1t46a_         162 ASKNCIHRDLAARNILLTHGR---ITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW  238 (311)
T ss_dssp             HHTTCCCSCCSGGGEEEETTT---EEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             HhCCeeecccccccccccccC---cccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHH
Confidence            557999999999999999877   79999999998765432   234468899999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCcHHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHHh
Q 008370           79 QLVT-GKPPFDGSNQLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFFN  142 (568)
Q Consensus        79 ELlt-G~~PF~g~~~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL~  142 (568)
                      ||++ |.+||.+.+..+.+.+++.....   +..+...++.+.+||.+||..||.+|||++++++
T Consensus       239 ellt~g~p~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         239 ELFSLGSSPYPGMPVDSKFYKMIKEGFR---MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HHHTTTCCSSTTCCSSHHHHHHHHHTCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHhcCCC---CCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            9998 77778777766666666554322   2223467899999999999999999999999975

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.90  E-value=6.8e-25  Score=226.38  Aligned_cols=144  Identities=20%  Similarity=0.299  Sum_probs=106.5

Q ss_pred             CCeEecCCCCCCeEEecCCCC---CcEEEeecccceecCCCCCCccccCCCcccChhhhccCCCCcccchhhHHHHHHHH
Q 008370            4 VFMIVSANACQNLLVSTNEVT---PVLKIGDFGFARSLTPQDLADTLCGSPLYMAPEIIQNHKYDAKADLWSVGAILFQL   80 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~---~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAPEvl~~~~ys~ksDIWSlGviL~EL   80 (568)
                      .||+||||||+|||++.++..   ..+|++|||.++....  .....+||+.|+|||++.+..|+.++|+||+||++++|
T Consensus       145 ~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el  222 (362)
T d1q8ya_         145 CGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFEL  222 (362)
T ss_dssp             TCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHH
T ss_pred             cCcccccCChhHeeeeccCcccccceeeEeeccccccccc--ccccccccccccChhhccccCCCccccccchHHHHHHH
Confidence            689999999999999876532   2489999999987543  33567899999999999999999999999999999999


Q ss_pred             HhCCCCCCCCcHH------HHHHHHHhc-cC----------------------CCCC--------------CCcccccCH
Q 008370           81 VTGKPPFDGSNQL------QLFQNILTS-TE----------------------LRFP--------------PGAIEELHP  117 (568)
Q Consensus        81 ltG~~PF~g~~~~------~~~~~Il~~-~~----------------------~~~p--------------~~~~~~ls~  117 (568)
                      ++|+.||.+....      ..+...... +.                      ....              .......++
T Consensus       223 ~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  302 (362)
T d1q8ya_         223 ITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAK  302 (362)
T ss_dssp             HHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHH
T ss_pred             HHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCH
Confidence            9999999754321      111111100 00                      0000              011123457


Q ss_pred             HHHHHHHHhhccCCCCCCCHHHHHhchhHHHh
Q 008370          118 DCVDLCRCLLRQNPVERITFKEFFNHRFLGEL  149 (568)
Q Consensus       118 ~~~dLI~~cL~~dP~~RpTaeElL~Hpff~~~  149 (568)
                      ++.+|+.+||..||.+|||++|+|+||||++.
T Consensus       303 ~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         303 EISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  334 (362)
T ss_dssp             HHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence            89999999999999999999999999999743

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.90  E-value=1.4e-24  Score=219.47  Aligned_cols=141  Identities=12%  Similarity=0.165  Sum_probs=108.1

Q ss_pred             CCCCCeEecCCCCCCeEEecCC--CCCcEEEeecccceecCCC--------CCCccccCCCcccChhhhccCCCCcccch
Q 008370            1 MCYVFMIVSANACQNLLVSTNE--VTPVLKIGDFGFARSLTPQ--------DLADTLCGSPLYMAPEIIQNHKYDAKADL   70 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~--~~~vvKL~DFGlAr~l~~~--------~~~~t~~GT~~YmAPEvl~~~~ys~ksDI   70 (568)
                      ||..|||||||||+|||++...  ..+.+||+|||+|+.....        ....+.+||+.|||||++.+..++.++||
T Consensus       117 lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~Di  196 (293)
T d1csna_         117 IHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDL  196 (293)
T ss_dssp             HHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHH
T ss_pred             HHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHH
Confidence            4678999999999999998642  2347999999999876432        12345789999999999999999999999


Q ss_pred             hhHHHHHHHHHhCCCCCCCCc---HHHHHHHHHhccCCCCCCCcccccCHHHHHHHHHhhccCCCCCCCHHHHH
Q 008370           71 WSVGAILFQLVTGKPPFDGSN---QLQLFQNILTSTELRFPPGAIEELHPDCVDLCRCLLRQNPVERITFKEFF  141 (568)
Q Consensus        71 WSlGviL~ELltG~~PF~g~~---~~~~~~~Il~~~~~~~p~~~~~~ls~~~~dLI~~cL~~dP~~RpTaeElL  141 (568)
                      |||||++|||++|+.||.+..   ....+.++........++.....+++++.+++..|+..+|.+||+++.+.
T Consensus       197 wSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         197 EALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             HHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             HHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence            999999999999999998643   33333333322211111222245788999999999999999999988764

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.1e-24  Score=221.67  Aligned_cols=138  Identities=17%  Similarity=0.229  Sum_probs=98.7

Q ss_pred             CCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCC-----CCccccCCCcccChhhhccC------CCCcccchh
Q 008370            3 YVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQD-----LADTLCGSPLYMAPEIIQNH------KYDAKADLW   71 (568)
Q Consensus         3 ~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~-----~~~t~~GT~~YmAPEvl~~~------~ys~ksDIW   71 (568)
                      ..+||||||||+||||+.++   .+||+|||+++......     .....+||+.|||||++.+.      .++.++|||
T Consensus       126 ~~~IvHrDlKp~NILl~~~~---~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~  202 (303)
T d1vjya_         126 KPAIAHRDLKSKNILVKKNG---TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY  202 (303)
T ss_dssp             BCEEECSCCCGGGEEECTTS---CEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHH
T ss_pred             CCCeeccccCccceEEcCCC---CeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhh
Confidence            46999999999999998877   79999999998765432     23457899999999998654      256789999


Q ss_pred             hHHHHHHHHHhCCCCCCCCc--------------HHHHHHHHHhccCC--CCCCCc-ccccCHHHHHHHHHhhccCCCCC
Q 008370           72 SVGAILFQLVTGKPPFDGSN--------------QLQLFQNILTSTEL--RFPPGA-IEELHPDCVDLCRCLLRQNPVER  134 (568)
Q Consensus        72 SlGviL~ELltG~~PF~g~~--------------~~~~~~~Il~~~~~--~~p~~~-~~~ls~~~~dLI~~cL~~dP~~R  134 (568)
                      ||||++|||++|..||....              ..............  .++... .......+.+|+.+||+.||.+|
T Consensus       203 S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~R  282 (303)
T d1vjya_         203 AMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAAR  282 (303)
T ss_dssp             HHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGS
T ss_pred             hhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHC
Confidence            99999999999988774211              12222223222111  112111 11223468899999999999999


Q ss_pred             CCHHHHHhc
Q 008370          135 ITFKEFFNH  143 (568)
Q Consensus       135 pTaeElL~H  143 (568)
                      ||+.||+++
T Consensus       283 ps~~ei~~~  291 (303)
T d1vjya_         283 LTALRIKKT  291 (303)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999764

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.53  E-value=7.2e-09  Score=96.14  Aligned_cols=65  Identities=15%  Similarity=0.071  Sum_probs=44.2

Q ss_pred             CCCCCeEecCCCCCCeEEecCCCCCcEEEeecccceecCCCCCCccccCCCcccCh--hh---hccCCCCcccchhhHHH
Q 008370            1 MCYVFMIVSANACQNLLVSTNEVTPVLKIGDFGFARSLTPQDLADTLCGSPLYMAP--EI---IQNHKYDAKADLWSVGA   75 (568)
Q Consensus         1 m~~~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~l~~~~~~~t~~GT~~YmAP--Ev---l~~~~ys~ksDIWSlGv   75 (568)
                      ||..||+||||||+|||++.++    ++|+|||.|+....... .      .|...  +.   +-...|+.++|+||..-
T Consensus       119 lH~~giiHrDiKP~NILv~~~~----~~liDFG~a~~~~~~~~-~------~~l~rd~~~~~~~f~r~y~~~~d~~s~~~  187 (191)
T d1zara2         119 FYHRGIVHGDLSQYNVLVSEEG----IWIIDFPQSVEVGEEGW-R------EILERDVRNIITYFSRTYRTEKDINSAID  187 (191)
T ss_dssp             HHHTTEECSCCSTTSEEEETTE----EEECCCTTCEETTSTTH-H------HHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred             HhhCCEEEccCChhheeeeCCC----EEEEECCCcccCCCCCc-H------HHHHHHHHHHHHHHcCCCCCcccHHHHHH
Confidence            3557999999999999999654    89999999977543221 0      11111  00   11356888999999764


Q ss_pred             H
Q 008370           76 I   76 (568)
Q Consensus        76 i   76 (568)
                      -
T Consensus       188 ~  188 (191)
T d1zara2         188 R  188 (191)
T ss_dssp             H
T ss_pred             H
Confidence            3

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=91.00  E-value=0.032  Score=53.59  Aligned_cols=30  Identities=23%  Similarity=0.164  Sum_probs=25.9

Q ss_pred             CCeEecCCCCCCeEEecCCCCCcEEEeecccce
Q 008370            4 VFMIVSANACQNLLVSTNEVTPVLKIGDFGFAR   36 (568)
Q Consensus         4 ~~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr   36 (568)
                      .|+||+|+.+.||+++.+.   +.-|.||+.+.
T Consensus       183 ~giIHgDl~~dNvl~~~~~---v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDE---LSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEETTE---EEEECCCTTCE
T ss_pred             cccccCCcchhhhhccccc---ceeEecccccc
Confidence            4899999999999999765   56799999874

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=85.53  E-value=0.19  Score=46.17  Aligned_cols=30  Identities=17%  Similarity=0.145  Sum_probs=24.9

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      .++|+|+.|.|||++.++   ++-|+||+.+..
T Consensus       184 ~l~HgD~~~~Nil~~~~~---~~~lIDwe~a~~  213 (263)
T d1j7la_         184 VFSHGDLGDSNIFVKDGK---VSGFIDLGRSGR  213 (263)
T ss_dssp             EEECSCCCTTSEEEETTE---EEEECCCTTCEE
T ss_pred             EEEEeeccCcceeecCCc---eEEEeechhccc
Confidence            489999999999998754   456999998753

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=84.73  E-value=0.16  Score=46.38  Aligned_cols=30  Identities=13%  Similarity=0.108  Sum_probs=25.2

Q ss_pred             CeEecCCCCCCeEEecCCCCCcEEEeeccccee
Q 008370            5 FMIVSANACQNLLVSTNEVTPVLKIGDFGFARS   37 (568)
Q Consensus         5 ~IIHrDLKP~NILL~~~~~~~vvKL~DFGlAr~   37 (568)
                      .++|+|+.|.|||++.+.   ++-|+||+.+..
T Consensus       176 ~liHgD~~~~Nvl~~~~~---~~~iID~~~~~~  205 (255)
T d1nd4a_         176 VVTHGDACLPNIMVENGR---FSGFIDCGRLGV  205 (255)
T ss_dssp             EEECSSCCGGGEEEETTE---EEEECCCTTCEE
T ss_pred             eEEeCCCCCcceEEeCCc---eEEEEEchhccc
Confidence            589999999999998764   567999998753