Query 008371
Match_columns 568
No_of_seqs 490 out of 3039
Neff 7.9
Searched_HMMs 46136
Date Thu Mar 28 22:59:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/008371.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/008371hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1838 Alpha/beta hydrolase [ 100.0 1E-68 2.3E-73 549.1 34.9 396 14-426 2-399 (409)
2 COG0429 Predicted hydrolase of 100.0 1.6E-53 3.5E-58 422.3 28.1 318 86-417 18-342 (345)
3 PLN02511 hydrolase 100.0 1.9E-50 4.1E-55 429.0 38.0 344 63-418 20-368 (388)
4 PRK10985 putative hydrolase; P 100.0 9.3E-45 2E-49 377.0 35.7 318 85-417 2-322 (324)
5 PLN02298 hydrolase, alpha/beta 99.9 1.6E-24 3.5E-29 225.5 22.5 280 111-417 29-319 (330)
6 PLN02385 hydrolase; alpha/beta 99.9 3.1E-24 6.6E-29 225.4 21.4 279 111-416 58-346 (349)
7 PHA02857 monoglyceride lipase; 99.9 2.2E-23 4.8E-28 211.0 23.3 263 118-415 4-273 (276)
8 TIGR02240 PHA_depoly_arom poly 99.9 2.1E-22 4.5E-27 204.2 19.7 247 153-424 24-275 (276)
9 PRK10749 lysophospholipase L2; 99.9 1.5E-22 3.3E-27 210.9 18.8 289 97-414 18-328 (330)
10 PLN02824 hydrolase, alpha/beta 99.9 5.4E-22 1.2E-26 203.0 22.3 242 154-414 29-293 (294)
11 COG2267 PldB Lysophospholipase 99.9 1.1E-21 2.3E-26 201.0 24.0 272 113-416 8-295 (298)
12 PLN02652 hydrolase; alpha/beta 99.9 1.5E-21 3.1E-26 207.5 25.4 271 114-417 110-389 (395)
13 PRK00870 haloalkane dehalogena 99.9 2.4E-22 5.1E-27 206.6 18.8 268 109-414 14-300 (302)
14 PRK03592 haloalkane dehalogena 99.9 7.3E-22 1.6E-26 202.1 21.4 244 154-416 27-290 (295)
15 KOG1455 Lysophospholipase [Lip 99.9 1.6E-21 3.4E-26 192.2 18.1 280 111-414 24-311 (313)
16 TIGR03343 biphenyl_bphD 2-hydr 99.9 1.5E-21 3.2E-26 197.7 17.3 239 154-413 30-281 (282)
17 TIGR03611 RutD pyrimidine util 99.9 2.9E-21 6.3E-26 191.0 17.6 239 152-413 11-256 (257)
18 PLN02679 hydrolase, alpha/beta 99.9 1.9E-20 4.2E-25 197.4 24.9 245 153-415 87-357 (360)
19 TIGR02427 protocat_pcaD 3-oxoa 99.9 2.3E-21 5E-26 190.0 15.9 236 153-412 12-250 (251)
20 TIGR01738 bioH putative pimelo 99.9 2.1E-21 4.5E-26 189.9 15.0 234 154-412 4-245 (245)
21 TIGR01607 PST-A Plasmodium sub 99.9 3.7E-21 7.9E-26 200.6 17.0 268 119-413 2-331 (332)
22 PLN03087 BODYGUARD 1 domain co 99.9 2.5E-20 5.4E-25 201.1 22.2 252 152-414 199-478 (481)
23 PRK13604 luxD acyl transferase 99.9 2.1E-20 4.5E-25 189.0 20.0 251 115-418 10-262 (307)
24 TIGR03056 bchO_mg_che_rel puta 99.9 2.7E-20 5.9E-25 187.3 20.6 246 153-413 27-278 (278)
25 TIGR01250 pro_imino_pep_2 prol 99.9 9.8E-20 2.1E-24 182.7 24.1 248 153-413 24-288 (288)
26 PRK10349 carboxylesterase BioH 99.9 1.3E-20 2.9E-25 188.5 17.7 233 154-413 13-254 (256)
27 PLN02578 hydrolase 99.9 3.5E-20 7.6E-25 195.0 21.2 243 154-413 86-353 (354)
28 PRK10673 acyl-CoA esterase; Pr 99.9 1.5E-20 3.3E-25 187.3 16.9 237 152-414 14-254 (255)
29 PLN02965 Probable pheophorbida 99.9 9.3E-21 2E-25 189.9 15.4 242 156-416 5-254 (255)
30 PRK06489 hypothetical protein; 99.8 6.5E-20 1.4E-24 193.4 22.2 248 154-416 69-358 (360)
31 PF12697 Abhydrolase_6: Alpha/ 99.8 2.5E-20 5.4E-25 179.3 17.0 217 157-395 1-220 (228)
32 TIGR03695 menH_SHCHC 2-succiny 99.8 1.7E-20 3.7E-25 183.2 15.3 239 154-412 1-250 (251)
33 PRK07581 hypothetical protein; 99.8 8.2E-20 1.8E-24 191.0 21.0 254 153-416 40-337 (339)
34 PRK03204 haloalkane dehalogena 99.8 1.7E-19 3.7E-24 184.2 22.8 264 112-412 12-285 (286)
35 PRK11126 2-succinyl-6-hydroxy- 99.8 3.5E-20 7.6E-25 183.4 17.0 231 154-414 2-241 (242)
36 COG1647 Esterase/lipase [Gener 99.8 1.8E-20 3.8E-25 176.4 12.8 224 155-413 16-242 (243)
37 PRK05077 frsA fermentation/res 99.8 5.8E-19 1.3E-23 189.0 25.8 244 112-415 166-412 (414)
38 PLN02872 triacylglycerol lipas 99.8 4.5E-20 9.7E-25 195.5 15.1 306 95-415 26-389 (395)
39 TIGR01249 pro_imino_pep_1 prol 99.8 7.1E-19 1.5E-23 181.3 22.4 126 115-264 5-130 (306)
40 KOG4178 Soluble epoxide hydrol 99.8 1.5E-19 3.2E-24 181.0 16.0 249 151-416 41-321 (322)
41 PLN02894 hydrolase, alpha/beta 99.8 3.8E-18 8.2E-23 182.4 27.5 259 152-422 103-392 (402)
42 KOG4409 Predicted hydrolase/ac 99.8 3.9E-18 8.5E-23 171.2 23.5 301 87-415 37-364 (365)
43 KOG1454 Predicted hydrolase/ac 99.8 4.5E-19 9.7E-24 183.6 16.5 282 114-415 25-324 (326)
44 PRK08775 homoserine O-acetyltr 99.8 3.5E-19 7.5E-24 186.7 15.7 232 171-417 84-341 (343)
45 TIGR01392 homoserO_Ac_trn homo 99.8 8.3E-19 1.8E-23 184.4 17.7 112 153-266 30-164 (351)
46 TIGR03100 hydr1_PEP hydrolase, 99.8 3.6E-18 7.9E-23 173.4 20.5 253 122-413 9-273 (274)
47 PLN03084 alpha/beta hydrolase 99.8 1.7E-17 3.6E-22 175.6 24.7 239 153-413 126-382 (383)
48 KOG4391 Predicted alpha/beta h 99.8 4.6E-18 9.9E-23 158.8 17.4 231 111-417 51-284 (300)
49 PRK00175 metX homoserine O-ace 99.8 6.5E-18 1.4E-22 179.4 21.0 253 153-417 47-376 (379)
50 PRK05855 short chain dehydroge 99.8 8.7E-18 1.9E-22 187.6 21.8 271 117-418 5-295 (582)
51 PRK14875 acetoin dehydrogenase 99.8 1.1E-17 2.3E-22 176.5 20.6 238 152-414 129-370 (371)
52 PLN02211 methyl indole-3-aceta 99.8 1.4E-17 3.1E-22 168.9 17.6 241 152-414 16-269 (273)
53 TIGR01836 PHA_synth_III_C poly 99.7 1.4E-17 3.1E-22 174.9 15.5 107 154-268 62-175 (350)
54 PF00561 Abhydrolase_1: alpha/ 99.7 1.5E-17 3.4E-22 161.8 11.6 207 184-396 1-220 (230)
55 PRK10566 esterase; Provisional 99.7 1.1E-16 2.5E-21 159.4 16.2 209 152-415 25-248 (249)
56 KOG1552 Predicted alpha/beta h 99.7 5.2E-16 1.1E-20 150.5 18.6 215 118-418 39-255 (258)
57 PLN02980 2-oxoglutarate decarb 99.7 2.5E-15 5.4E-20 184.4 26.5 246 153-417 1370-1641(1655)
58 PF12695 Abhydrolase_5: Alpha/ 99.7 7.9E-16 1.7E-20 139.7 14.9 144 156-391 1-145 (145)
59 KOG2382 Predicted alpha/beta h 99.7 2.3E-16 4.9E-21 158.3 12.0 244 151-415 49-313 (315)
60 KOG2984 Predicted hydrolase [G 99.7 1.2E-16 2.7E-21 147.8 8.8 228 156-414 44-275 (277)
61 COG1506 DAP2 Dipeptidyl aminop 99.7 5.3E-15 1.2E-19 166.4 21.3 246 111-416 362-617 (620)
62 PRK06765 homoserine O-acetyltr 99.7 8.5E-15 1.8E-19 155.3 21.6 256 152-414 54-387 (389)
63 PF06500 DUF1100: Alpha/beta h 99.6 5.8E-15 1.3E-19 153.9 18.5 240 112-415 163-409 (411)
64 TIGR00976 /NonD putative hydro 99.6 3.6E-15 7.9E-20 165.9 17.5 133 119-268 1-136 (550)
65 TIGR01838 PHA_synth_I poly(R)- 99.6 6.6E-15 1.4E-19 160.6 17.4 234 153-396 187-460 (532)
66 PRK11071 esterase YqiA; Provis 99.6 7.4E-15 1.6E-19 140.9 15.1 186 155-413 2-189 (190)
67 TIGR03101 hydr2_PEP hydrolase, 99.6 1.2E-14 2.6E-19 146.1 16.9 112 152-266 23-136 (266)
68 PF00326 Peptidase_S9: Prolyl 99.6 4.6E-15 9.9E-20 144.6 12.3 196 174-417 5-211 (213)
69 PRK07868 acyl-CoA synthetase; 99.6 5E-14 1.1E-18 166.9 20.2 255 153-418 66-364 (994)
70 COG2945 Predicted hydrolase of 99.5 1E-13 2.2E-18 128.2 14.8 177 151-413 25-205 (210)
71 KOG4667 Predicted esterase [Li 99.5 7.2E-14 1.6E-18 131.0 13.6 208 152-392 31-240 (269)
72 PLN00021 chlorophyllase 99.5 5.5E-13 1.2E-17 137.5 19.5 116 125-263 37-165 (313)
73 PLN02442 S-formylglutathione h 99.5 1.8E-12 3.8E-17 132.3 21.7 208 123-392 28-263 (283)
74 COG4757 Predicted alpha/beta h 99.5 1.8E-13 3.8E-18 129.8 11.5 259 117-412 8-280 (281)
75 PRK11460 putative hydrolase; P 99.5 2.3E-12 5.1E-17 127.6 18.3 179 151-417 13-210 (232)
76 KOG2564 Predicted acetyltransf 99.5 1.3E-12 2.9E-17 127.1 15.7 107 152-262 72-180 (343)
77 KOG2624 Triglyceride lipase-ch 99.5 8.8E-13 1.9E-17 138.6 15.5 289 111-416 45-399 (403)
78 PRK10115 protease 2; Provision 99.5 1.1E-12 2.3E-17 148.9 17.2 227 112-391 414-653 (686)
79 PF05448 AXE1: Acetyl xylan es 99.4 1.4E-12 3.1E-17 134.7 15.2 245 110-414 52-319 (320)
80 PF02129 Peptidase_S15: X-Pro 99.4 1.3E-13 2.7E-18 139.9 7.1 130 123-268 1-140 (272)
81 TIGR01840 esterase_phb esteras 99.4 5.7E-12 1.2E-16 122.9 18.5 110 152-264 11-130 (212)
82 TIGR02821 fghA_ester_D S-formy 99.4 8.8E-12 1.9E-16 126.6 20.4 129 123-266 23-175 (275)
83 COG0596 MhpC Predicted hydrola 99.4 4.4E-12 9.5E-17 123.1 16.7 102 154-265 21-124 (282)
84 PF01738 DLH: Dienelactone hyd 99.4 2.2E-12 4.8E-17 126.3 12.0 186 152-415 12-217 (218)
85 TIGR01849 PHB_depoly_PhaZ poly 99.3 4.8E-11 1E-15 125.8 19.2 250 154-414 102-405 (406)
86 PRK10162 acetyl esterase; Prov 99.3 7.3E-11 1.6E-15 122.5 20.0 131 112-266 55-197 (318)
87 TIGR01839 PHA_synth_II poly(R) 99.3 1.4E-11 2.9E-16 133.6 14.6 108 154-268 215-332 (560)
88 COG0412 Dienelactone hydrolase 99.3 1.7E-10 3.7E-15 114.4 20.0 207 116-416 4-234 (236)
89 COG3458 Acetyl esterase (deace 99.3 2.4E-11 5.3E-16 118.0 12.9 243 111-416 53-318 (321)
90 COG2021 MET2 Homoserine acetyl 99.2 3.4E-10 7.4E-15 115.6 18.1 114 152-267 49-185 (368)
91 PF02230 Abhydrolase_2: Phosph 99.2 3E-10 6.6E-15 111.1 17.2 182 150-415 10-215 (216)
92 TIGR03230 lipo_lipase lipoprot 99.2 7E-11 1.5E-15 125.9 13.2 112 151-264 38-154 (442)
93 COG2936 Predicted acyl esteras 99.2 1.3E-10 2.9E-15 125.4 14.7 139 113-270 18-165 (563)
94 PF08538 DUF1749: Protein of u 99.2 5.1E-11 1.1E-15 119.8 10.3 244 153-413 32-303 (303)
95 cd00707 Pancreat_lipase_like P 99.2 3.2E-11 7E-16 122.4 8.9 112 151-264 33-147 (275)
96 PRK05371 x-prolyl-dipeptidyl a 99.2 2.8E-10 6.1E-15 130.3 16.7 227 174-417 270-521 (767)
97 PF06342 DUF1057: Alpha/beta h 99.2 2.9E-09 6.2E-14 105.2 20.3 128 117-264 9-137 (297)
98 PF06821 Ser_hydrolase: Serine 99.1 9.1E-10 2E-14 103.6 11.8 156 157-397 1-159 (171)
99 PF02273 Acyl_transf_2: Acyl t 99.1 2.8E-09 6.1E-14 102.4 15.0 250 115-417 3-254 (294)
100 COG3571 Predicted hydrolase of 99.1 3.5E-09 7.6E-14 95.3 14.1 168 152-391 12-181 (213)
101 PF12146 Hydrolase_4: Putative 99.0 1.5E-09 3.3E-14 88.5 7.9 60 124-200 1-60 (79)
102 COG0657 Aes Esterase/lipase [L 99.0 2.6E-08 5.7E-13 103.0 17.7 130 120-268 57-195 (312)
103 PF07859 Abhydrolase_3: alpha/ 98.9 2E-09 4.3E-14 104.4 8.2 102 157-266 1-112 (211)
104 KOG2931 Differentiation-relate 98.9 6.8E-07 1.5E-11 88.4 25.7 274 114-417 22-308 (326)
105 COG3208 GrsT Predicted thioest 98.9 8.8E-09 1.9E-13 99.9 12.4 211 152-395 5-220 (244)
106 PF12740 Chlorophyllase2: Chlo 98.9 3.2E-08 7E-13 98.0 16.1 104 151-263 14-130 (259)
107 KOG2281 Dipeptidyl aminopeptid 98.9 1.7E-08 3.7E-13 108.0 14.9 249 98-414 592-866 (867)
108 COG0400 Predicted esterase [Ge 98.9 3.1E-08 6.8E-13 95.7 15.1 177 149-415 13-205 (207)
109 KOG2100 Dipeptidyl aminopeptid 98.9 4.3E-08 9.4E-13 112.2 18.7 256 93-418 481-750 (755)
110 TIGR03502 lipase_Pla1_cef extr 98.9 1E-08 2.3E-13 115.8 12.3 95 153-249 448-577 (792)
111 COG4188 Predicted dienelactone 98.9 2.5E-08 5.3E-13 102.4 13.5 117 124-250 49-182 (365)
112 PF12715 Abhydrolase_7: Abhydr 98.9 3.3E-09 7.2E-14 109.4 6.4 133 115-264 89-260 (390)
113 KOG3043 Predicted hydrolase re 98.8 2.6E-08 5.7E-13 94.8 11.5 159 155-394 40-211 (242)
114 PF00975 Thioesterase: Thioest 98.8 1.6E-07 3.5E-12 92.1 17.2 103 156-265 2-105 (229)
115 PF10230 DUF2305: Uncharacteri 98.8 4.8E-07 1E-11 91.5 20.6 107 154-264 2-122 (266)
116 PF09752 DUF2048: Uncharacteri 98.8 1.9E-07 4.2E-12 95.5 17.1 107 152-262 90-208 (348)
117 KOG1515 Arylacetamide deacetyl 98.8 5.2E-07 1.1E-11 93.4 19.7 253 119-415 66-335 (336)
118 COG3243 PhaC Poly(3-hydroxyalk 98.7 6.2E-08 1.3E-12 100.4 10.6 108 154-268 107-221 (445)
119 PF05728 UPF0227: Uncharacteri 98.7 3.3E-07 7.2E-12 87.4 14.5 90 157-266 2-93 (187)
120 PF03583 LIP: Secretory lipase 98.7 1.1E-06 2.4E-11 90.0 19.3 233 171-418 14-284 (290)
121 PF07819 PGAP1: PGAP1-like pro 98.7 3.5E-07 7.5E-12 90.1 14.4 109 154-267 4-126 (225)
122 PF06028 DUF915: Alpha/beta hy 98.7 1E-07 2.2E-12 95.2 10.4 112 155-268 12-147 (255)
123 PF03403 PAF-AH_p_II: Platelet 98.7 4.8E-08 1E-12 103.4 8.3 107 152-263 98-261 (379)
124 PF03096 Ndr: Ndr family; Int 98.7 1E-06 2.2E-11 88.3 16.6 248 152-415 21-279 (283)
125 PF06057 VirJ: Bacterial virul 98.6 2.2E-07 4.8E-12 87.4 10.4 102 156-264 4-107 (192)
126 PF07224 Chlorophyllase: Chlor 98.6 5.7E-07 1.2E-11 87.7 13.4 104 151-263 43-156 (307)
127 COG3545 Predicted esterase of 98.6 7.4E-07 1.6E-11 82.2 13.2 175 155-413 3-177 (181)
128 COG4099 Predicted peptidase [G 98.5 2.7E-06 5.8E-11 84.2 15.8 125 122-265 169-305 (387)
129 PF05677 DUF818: Chlamydia CHL 98.5 7.2E-06 1.6E-10 83.3 19.0 119 113-249 111-237 (365)
130 KOG4627 Kynurenine formamidase 98.5 4.2E-07 9.1E-12 85.3 8.8 202 118-397 47-253 (270)
131 PLN02733 phosphatidylcholine-s 98.5 7.7E-07 1.7E-11 95.7 11.4 96 169-267 107-204 (440)
132 PF10503 Esterase_phd: Esteras 98.5 2E-06 4.4E-11 84.0 12.9 109 152-263 14-131 (220)
133 PTZ00472 serine carboxypeptida 98.4 3.6E-05 7.9E-10 83.8 21.5 135 115-265 48-217 (462)
134 PF01674 Lipase_2: Lipase (cla 98.3 1.9E-07 4.1E-12 91.1 2.4 90 157-248 4-96 (219)
135 KOG1553 Predicted alpha/beta h 98.3 5.8E-06 1.3E-10 83.2 12.3 134 112-266 212-347 (517)
136 KOG2565 Predicted hydrolases o 98.3 2.4E-05 5.1E-10 79.8 16.4 117 123-257 132-257 (469)
137 PF00151 Lipase: Lipase; Inte 98.3 4.7E-07 1E-11 94.1 3.8 109 151-265 68-188 (331)
138 PF08840 BAAT_C: BAAT / Acyl-C 98.3 3.5E-07 7.6E-12 89.3 2.1 53 211-266 4-58 (213)
139 KOG3847 Phospholipase A2 (plat 98.2 1.2E-05 2.6E-10 80.2 12.4 107 151-262 115-273 (399)
140 PF05705 DUF829: Eukaryotic pr 98.2 5.3E-05 1.1E-09 75.3 17.0 218 157-412 2-240 (240)
141 PF11339 DUF3141: Protein of u 98.2 4.1E-05 8.8E-10 81.6 16.5 103 151-268 66-179 (581)
142 PF05990 DUF900: Alpha/beta hy 98.2 1.4E-05 3.1E-10 79.1 11.5 115 151-266 15-139 (233)
143 KOG2237 Predicted serine prote 98.2 7.6E-06 1.6E-10 88.6 10.0 140 114-266 441-586 (712)
144 COG1770 PtrB Protease II [Amin 98.2 1.6E-05 3.4E-10 86.8 12.4 139 115-266 420-564 (682)
145 KOG3253 Predicted alpha/beta h 98.2 4.3E-06 9.2E-11 89.6 7.6 168 152-395 174-349 (784)
146 PF03959 FSH1: Serine hydrolas 98.1 8.2E-06 1.8E-10 79.7 8.8 108 153-264 3-145 (212)
147 COG3509 LpqC Poly(3-hydroxybut 98.1 3.4E-05 7.4E-10 76.9 12.3 126 122-264 42-179 (312)
148 KOG2551 Phospholipase/carboxyh 98.1 0.00018 3.9E-09 69.0 16.3 184 153-418 4-223 (230)
149 PRK10252 entF enterobactin syn 98.1 0.0002 4.4E-09 88.0 20.8 99 154-262 1068-1169(1296)
150 PF00756 Esterase: Putative es 98.0 1.8E-05 3.9E-10 78.8 9.1 130 124-266 5-152 (251)
151 PF05057 DUF676: Putative seri 98.0 6.5E-05 1.4E-09 73.6 11.5 112 153-267 3-128 (217)
152 COG4814 Uncharacterized protei 97.9 4.2E-05 9.2E-10 74.4 9.3 109 154-265 46-177 (288)
153 PF12048 DUF3530: Protein of u 97.9 0.00033 7.2E-09 72.4 16.4 114 151-266 84-231 (310)
154 PRK04940 hypothetical protein; 97.9 0.00038 8.2E-09 65.5 15.1 35 227-266 60-94 (180)
155 COG3319 Thioesterase domains o 97.9 8.6E-05 1.9E-09 74.2 11.4 103 155-265 1-104 (257)
156 KOG4840 Predicted hydrolases o 97.9 0.00022 4.9E-09 68.0 12.7 108 153-267 35-147 (299)
157 cd00312 Esterase_lipase Estera 97.8 6.4E-05 1.4E-09 82.8 9.0 126 125-265 77-214 (493)
158 KOG1551 Uncharacterized conser 97.6 0.00045 9.8E-09 67.6 10.8 59 353-416 309-367 (371)
159 KOG3975 Uncharacterized conser 97.6 0.001 2.2E-08 64.8 12.6 110 151-262 26-145 (301)
160 PRK10439 enterobactin/ferric e 97.6 0.00074 1.6E-08 72.5 12.8 123 124-263 191-322 (411)
161 COG4782 Uncharacterized protei 97.6 0.00041 8.8E-09 71.2 10.0 114 152-266 114-236 (377)
162 PF05577 Peptidase_S28: Serine 97.6 0.00057 1.2E-08 74.1 11.8 111 153-266 28-150 (434)
163 PLN02606 palmitoyl-protein thi 97.5 0.004 8.6E-08 63.2 16.2 107 153-266 26-134 (306)
164 KOG2112 Lysophospholipase [Lip 97.5 0.00093 2E-08 63.7 10.2 57 350-414 144-203 (206)
165 KOG3101 Esterase D [General fu 97.4 0.00064 1.4E-08 64.5 8.3 129 125-266 26-181 (283)
166 COG1075 LipA Predicted acetylt 97.4 0.00051 1.1E-08 71.9 8.6 105 156-268 61-168 (336)
167 COG2272 PnbA Carboxylesterase 97.4 0.00059 1.3E-08 72.8 8.7 114 151-265 91-218 (491)
168 COG1073 Hydrolases of the alph 97.3 0.0012 2.6E-08 66.3 9.5 74 342-416 223-298 (299)
169 COG1505 Serine proteases of th 97.2 0.0012 2.6E-08 71.6 8.2 160 93-267 372-538 (648)
170 smart00824 PKS_TE Thioesterase 97.1 0.0048 1E-07 58.6 11.7 88 168-262 12-100 (212)
171 PF02450 LCAT: Lecithin:choles 97.1 0.00081 1.8E-08 71.8 6.5 88 171-267 66-163 (389)
172 KOG3967 Uncharacterized conser 97.1 0.0045 9.8E-08 58.9 10.4 115 152-266 99-229 (297)
173 PF04301 DUF452: Protein of un 97.1 0.012 2.5E-07 57.2 13.6 77 154-262 11-88 (213)
174 PF00135 COesterase: Carboxyle 97.1 0.0012 2.6E-08 73.1 7.4 125 125-263 107-244 (535)
175 PF10340 DUF2424: Protein of u 96.9 0.0082 1.8E-07 62.9 11.6 110 153-267 121-238 (374)
176 KOG3724 Negative regulator of 96.9 0.0027 5.9E-08 70.7 8.3 102 154-265 89-221 (973)
177 PF11144 DUF2920: Protein of u 96.6 0.038 8.2E-07 58.3 13.5 108 151-261 32-216 (403)
178 cd00741 Lipase Lipase. Lipase 96.5 0.0067 1.5E-07 55.7 6.9 56 211-266 12-69 (153)
179 PLN02633 palmitoyl protein thi 96.3 0.033 7.2E-07 56.7 11.0 106 153-266 25-133 (314)
180 COG4553 DepA Poly-beta-hydroxy 96.2 0.11 2.4E-06 52.0 13.4 256 153-417 102-409 (415)
181 PLN02517 phosphatidylcholine-s 96.2 0.0063 1.4E-07 66.7 5.1 92 173-266 159-265 (642)
182 PF01764 Lipase_3: Lipase (cla 96.1 0.014 2.9E-07 52.5 6.3 56 210-265 47-106 (140)
183 PF08386 Abhydrolase_4: TAP-li 96.1 0.0078 1.7E-07 51.6 4.3 61 349-414 33-93 (103)
184 KOG2541 Palmitoyl protein thio 96.0 0.049 1.1E-06 54.0 10.0 105 154-266 24-130 (296)
185 PF04083 Abhydro_lipase: Parti 96.0 0.02 4.3E-07 44.4 5.7 50 111-169 9-58 (63)
186 PF00450 Peptidase_S10: Serine 95.9 0.1 2.3E-06 55.8 12.9 136 117-267 14-184 (415)
187 COG2382 Fes Enterochelin ester 95.8 0.054 1.2E-06 54.7 9.4 108 151-264 95-212 (299)
188 PF10142 PhoPQ_related: PhoPQ- 95.7 0.14 3E-06 53.9 12.7 154 225-419 170-324 (367)
189 PF06259 Abhydrolase_8: Alpha/ 95.7 0.12 2.5E-06 48.9 10.9 52 211-264 92-144 (177)
190 cd00519 Lipase_3 Lipase (class 95.7 0.02 4.4E-07 56.3 6.1 53 211-264 112-167 (229)
191 KOG2369 Lecithin:cholesterol a 95.7 0.0058 1.3E-07 64.9 2.2 91 170-266 124-227 (473)
192 KOG2183 Prolylcarboxypeptidase 95.7 0.13 2.7E-06 54.1 11.7 107 154-264 81-202 (492)
193 PF07082 DUF1350: Protein of u 95.6 0.069 1.5E-06 52.7 9.3 98 153-261 16-122 (250)
194 COG0627 Predicted esterase [Ge 95.4 0.042 9.1E-07 56.8 7.4 115 151-267 51-190 (316)
195 COG2819 Predicted hydrolase of 95.3 0.66 1.4E-05 46.3 15.0 43 219-263 127-171 (264)
196 PF01083 Cutinase: Cutinase; 95.2 0.032 6.9E-07 52.9 5.4 55 211-265 65-123 (179)
197 PF11187 DUF2974: Protein of u 95.1 0.051 1.1E-06 53.4 6.5 54 211-265 69-124 (224)
198 COG3150 Predicted esterase [Ge 94.7 0.2 4.4E-06 46.3 8.9 49 211-264 43-91 (191)
199 PF11288 DUF3089: Protein of u 94.5 0.069 1.5E-06 51.6 5.5 90 174-264 37-136 (207)
200 COG3946 VirJ Type IV secretory 94.3 0.14 3E-06 53.6 7.6 85 156-247 262-346 (456)
201 PLN03016 sinapoylglucose-malat 94.3 0.49 1.1E-05 51.3 12.2 113 151-263 63-209 (433)
202 KOG2182 Hydrolytic enzymes of 94.2 0.21 4.5E-06 53.7 9.0 112 152-266 84-209 (514)
203 PLN02454 triacylglycerol lipas 94.2 0.099 2.1E-06 55.6 6.6 38 210-247 209-248 (414)
204 PF02089 Palm_thioest: Palmito 94.2 0.11 2.3E-06 52.5 6.4 106 153-265 5-117 (279)
205 PLN02162 triacylglycerol lipas 94.1 0.12 2.7E-06 55.4 7.0 55 211-265 262-322 (475)
206 PLN00413 triacylglycerol lipas 94.0 0.13 2.9E-06 55.3 7.1 54 212-265 269-328 (479)
207 PLN02209 serine carboxypeptida 93.8 0.5 1.1E-05 51.3 11.2 114 151-266 65-214 (437)
208 PF05576 Peptidase_S37: PS-10 93.5 0.11 2.3E-06 54.8 5.2 109 151-266 60-171 (448)
209 PLN02934 triacylglycerol lipas 93.2 0.2 4.3E-06 54.4 6.7 54 211-264 305-364 (515)
210 KOG2521 Uncharacterized conser 92.5 1.5 3.2E-05 45.9 11.9 242 152-418 37-293 (350)
211 COG5153 CVT17 Putative lipase 92.3 0.26 5.7E-06 49.2 5.7 54 209-267 258-311 (425)
212 KOG4540 Putative lipase essent 92.3 0.26 5.7E-06 49.2 5.7 54 209-267 258-311 (425)
213 PLN02408 phospholipase A1 92.2 0.26 5.7E-06 51.7 5.9 54 211-264 182-240 (365)
214 PLN02847 triacylglycerol lipas 91.6 1.1 2.3E-05 49.7 9.9 36 212-247 236-271 (633)
215 KOG4372 Predicted alpha/beta h 91.1 0.39 8.5E-06 50.5 5.7 84 152-242 78-165 (405)
216 PLN02571 triacylglycerol lipas 91.0 0.33 7.2E-06 51.7 5.2 37 211-247 208-246 (413)
217 COG4947 Uncharacterized protei 90.8 0.24 5.2E-06 45.9 3.4 49 215-266 89-138 (227)
218 KOG4569 Predicted lipase [Lipi 89.9 0.47 1E-05 49.7 5.2 60 205-264 149-212 (336)
219 PLN02310 triacylglycerol lipas 89.4 0.69 1.5E-05 49.2 5.9 53 211-264 189-248 (405)
220 KOG1516 Carboxylesterase and r 89.2 1.8 3.8E-05 48.4 9.5 109 154-263 112-231 (545)
221 PLN02324 triacylglycerol lipas 89.1 0.59 1.3E-05 49.8 5.2 37 211-247 197-235 (415)
222 KOG1282 Serine carboxypeptidas 89.1 4.1 8.8E-05 44.3 11.7 130 117-262 47-211 (454)
223 COG2939 Carboxypeptidase C (ca 88.6 2.5 5.5E-05 45.8 9.6 96 151-248 98-219 (498)
224 PLN02802 triacylglycerol lipas 87.8 0.76 1.7E-05 50.0 5.1 37 211-247 312-350 (509)
225 PLN02719 triacylglycerol lipas 87.7 0.93 2E-05 49.4 5.6 38 210-247 276-318 (518)
226 PLN03037 lipase class 3 family 87.4 0.75 1.6E-05 50.2 4.8 36 212-247 299-338 (525)
227 PF06850 PHB_depo_C: PHB de-po 87.3 1.1 2.4E-05 42.6 5.3 67 347-414 130-201 (202)
228 PLN02753 triacylglycerol lipas 86.5 0.93 2E-05 49.5 4.9 36 211-246 291-331 (531)
229 PLN02761 lipase class 3 family 86.4 1 2.2E-05 49.3 5.0 37 210-246 271-313 (527)
230 COG0529 CysC Adenylylsulfate k 84.1 7.3 0.00016 36.8 8.8 41 151-191 19-59 (197)
231 PF08237 PE-PPE: PE-PPE domain 82.7 5 0.00011 39.5 7.8 83 183-265 2-90 (225)
232 PF05277 DUF726: Protein of un 81.9 3.1 6.7E-05 43.6 6.3 43 225-267 218-263 (345)
233 PLN02213 sinapoylglucose-malat 81.6 5.4 0.00012 41.4 8.0 78 185-262 3-94 (319)
234 KOG4388 Hormone-sensitive lipa 81.0 3.6 7.9E-05 45.2 6.4 101 153-264 395-508 (880)
235 COG3673 Uncharacterized conser 75.2 15 0.00033 37.7 8.5 97 151-247 28-142 (423)
236 KOG1202 Animal-type fatty acid 74.9 14 0.0003 44.2 9.0 98 151-264 2120-2219(2376)
237 PF09994 DUF2235: Uncharacteri 73.9 17 0.00036 37.0 8.7 94 155-248 2-113 (277)
238 TIGR03712 acc_sec_asp2 accesso 72.6 11 0.00023 41.0 7.2 102 149-264 284-389 (511)
239 PF07519 Tannase: Tannase and 69.9 46 0.00099 36.6 11.6 89 177-268 53-154 (474)
240 PF06309 Torsin: Torsin; Inte 68.8 8.6 0.00019 34.2 4.6 33 151-183 49-81 (127)
241 PF01583 APS_kinase: Adenylyls 66.4 11 0.00023 34.9 4.9 40 154-193 1-40 (156)
242 KOG2029 Uncharacterized conser 55.3 25 0.00055 39.1 6.0 55 213-267 510-575 (697)
243 PF03205 MobB: Molybdopterin g 55.0 25 0.00054 31.7 5.2 44 157-200 2-45 (140)
244 PF09949 DUF2183: Uncharacteri 54.9 1.2E+02 0.0025 25.8 8.9 83 171-258 12-96 (100)
245 PF03283 PAE: Pectinacetyleste 54.4 14 0.00031 39.0 4.0 35 211-245 138-174 (361)
246 PF06441 EHN: Epoxide hydrolas 53.5 18 0.00039 31.4 3.8 31 123-168 76-106 (112)
247 COG2830 Uncharacterized protei 50.7 42 0.00092 31.1 5.8 75 156-262 13-88 (214)
248 COG4822 CbiK Cobalamin biosynt 50.7 83 0.0018 30.6 8.0 56 151-223 135-191 (265)
249 KOG2385 Uncharacterized conser 49.7 33 0.00072 37.5 5.8 44 224-267 444-490 (633)
250 TIGR03709 PPK2_rel_1 polyphosp 46.3 25 0.00055 35.4 4.1 40 152-191 53-92 (264)
251 PF07519 Tannase: Tannase and 44.7 38 0.00083 37.2 5.6 67 348-416 351-428 (474)
252 COG4287 PqaA PhoPQ-activated p 43.0 1.6E+02 0.0034 31.2 9.2 66 346-418 325-390 (507)
253 PRK00889 adenylylsulfate kinas 41.7 55 0.0012 30.3 5.5 37 155-191 4-40 (175)
254 TIGR03707 PPK2_P_aer polyphosp 40.7 35 0.00075 33.7 4.0 74 152-240 28-102 (230)
255 PF01580 FtsK_SpoIIIE: FtsK/Sp 40.4 1.2E+02 0.0027 28.6 7.9 65 158-222 41-113 (205)
256 PRK05282 (alpha)-aspartyl dipe 39.6 1.6E+02 0.0035 29.1 8.6 92 153-245 30-130 (233)
257 cd03146 GAT1_Peptidase_E Type 38.7 1.9E+02 0.0042 27.8 9.0 85 153-243 30-129 (212)
258 KOG1283 Serine carboxypeptidas 36.6 2E+02 0.0044 29.9 8.7 93 152-247 29-142 (414)
259 PF10081 Abhydrolase_9: Alpha/ 36.0 1.7E+02 0.0036 29.9 8.0 107 154-266 33-149 (289)
260 PRK10751 molybdopterin-guanine 35.7 80 0.0017 29.7 5.5 43 154-196 5-47 (173)
261 KOG1532 GTPase XAB1, interacts 35.4 46 0.001 33.7 3.9 41 151-191 15-55 (366)
262 TIGR00176 mobB molybdopterin-g 35.2 63 0.0014 29.6 4.7 38 158-195 2-39 (155)
263 PF13396 PLDc_N: Phospholipase 35.2 11 0.00024 26.9 -0.3 26 527-556 21-46 (46)
264 PRK03846 adenylylsulfate kinas 35.2 2.1E+02 0.0045 27.1 8.5 40 152-191 21-60 (198)
265 PRK07933 thymidylate kinase; V 34.5 83 0.0018 30.4 5.6 42 157-198 2-43 (213)
266 cd01983 Fer4_NifH The Fer4_Nif 34.0 68 0.0015 25.5 4.3 32 159-190 3-34 (99)
267 PF03976 PPK2: Polyphosphate k 33.7 23 0.00049 35.0 1.5 40 153-192 29-68 (228)
268 PF05576 Peptidase_S37: PS-10 33.3 65 0.0014 34.6 4.8 63 348-413 349-412 (448)
269 COG5192 BMS1 GTP-binding prote 33.1 4.2E+02 0.009 29.8 10.8 100 151-259 65-171 (1077)
270 cd04951 GT1_WbdM_like This fam 32.4 2.5E+02 0.0055 28.3 9.3 38 156-193 2-39 (360)
271 COG1073 Hydrolases of the alph 31.7 3 6.4E-05 41.5 -5.3 95 152-249 47-154 (299)
272 PF04084 ORC2: Origin recognit 31.7 2.4E+02 0.0052 29.4 8.8 100 158-262 57-177 (326)
273 cd04502 SGNH_hydrolase_like_7 31.3 1.6E+02 0.0034 26.8 6.8 75 156-234 23-97 (171)
274 COG1087 GalE UDP-glucose 4-epi 31.2 73 0.0016 32.8 4.6 86 173-262 14-118 (329)
275 cd01841 NnaC_like NnaC (CMP-Ne 31.0 2.3E+02 0.005 25.7 7.9 75 155-233 23-97 (174)
276 CHL00175 minD septum-site dete 30.9 1.1E+02 0.0023 30.8 6.0 39 154-192 15-53 (281)
277 COG1763 MobB Molybdopterin-gua 30.5 84 0.0018 29.2 4.6 40 156-195 3-42 (161)
278 TIGR02069 cyanophycinase cyano 30.3 1.8E+02 0.0038 29.1 7.3 92 152-245 26-133 (250)
279 PF01656 CbiA: CobQ/CobB/MinD/ 30.3 71 0.0015 29.6 4.3 33 159-191 3-35 (195)
280 TIGR00455 apsK adenylylsulfate 30.2 4.4E+02 0.0096 24.3 10.3 40 152-191 15-54 (184)
281 cd05312 NAD_bind_1_malic_enz N 29.6 40 0.00088 34.2 2.6 82 158-246 28-125 (279)
282 TIGR02690 resist_ArsH arsenica 29.3 5.5E+02 0.012 25.1 10.5 41 153-193 25-67 (219)
283 KOG2170 ATPase of the AAA+ sup 29.0 82 0.0018 32.4 4.5 32 151-183 106-138 (344)
284 PF09419 PGP_phosphatase: Mito 28.3 1.5E+02 0.0033 27.7 5.9 54 178-237 35-88 (168)
285 PF05577 Peptidase_S28: Serine 28.1 86 0.0019 33.8 5.0 42 351-396 377-418 (434)
286 PF00450 Peptidase_S10: Serine 28.0 50 0.0011 35.1 3.1 60 350-413 330-414 (415)
287 KOG4389 Acetylcholinesterase/B 27.5 1.4E+02 0.003 32.8 6.1 105 154-262 135-253 (601)
288 TIGR01425 SRP54_euk signal rec 27.3 1.1E+02 0.0023 33.3 5.3 38 153-190 98-135 (429)
289 PF08484 Methyltransf_14: C-me 27.1 1.2E+02 0.0027 28.0 5.2 45 211-259 55-99 (160)
290 COG4088 Predicted nucleotide k 26.5 66 0.0014 31.3 3.2 35 157-191 3-37 (261)
291 PLN02213 sinapoylglucose-malat 26.2 1.1E+02 0.0024 31.6 5.2 59 350-413 233-315 (319)
292 PRK06696 uridine kinase; Valid 25.6 1.2E+02 0.0027 29.3 5.2 39 152-190 19-57 (223)
293 PRK13230 nitrogenase reductase 24.7 1.2E+02 0.0027 30.3 5.2 41 156-197 3-43 (279)
294 TIGR03063 srtB_target sortase 24.7 37 0.00079 22.0 0.8 11 544-554 17-27 (29)
295 TIGR03371 cellulose_yhjQ cellu 24.0 1.4E+02 0.0029 29.1 5.2 40 156-195 3-42 (246)
296 COG2240 PdxK Pyridoxal/pyridox 24.0 2.4E+02 0.0051 28.8 6.8 64 159-234 10-81 (281)
297 cd02036 MinD Bacterial cell di 23.9 1.3E+02 0.0029 27.3 4.9 35 158-192 3-37 (179)
298 PF00004 AAA: ATPase family as 23.8 2E+02 0.0043 24.4 5.7 35 158-195 1-35 (132)
299 KOG1282 Serine carboxypeptidas 23.7 1.3E+02 0.0028 32.9 5.2 60 351-414 364-447 (454)
300 KOG3551 Syntrophins (type beta 23.6 59 0.0013 34.2 2.5 45 113-164 450-495 (506)
301 TIGR03708 poly_P_AMP_trns poly 23.6 1.1E+02 0.0024 33.7 4.8 42 152-193 37-78 (493)
302 PLN02209 serine carboxypeptida 23.3 1.4E+02 0.003 32.5 5.4 59 350-413 351-433 (437)
303 PRK13768 GTPase; Provisional 23.2 1.3E+02 0.0028 30.0 4.8 35 157-191 4-38 (253)
304 PF01935 DUF87: Domain of unkn 23.2 1.2E+02 0.0026 29.3 4.6 36 158-193 26-62 (229)
305 PF02606 LpxK: Tetraacyldisacc 23.1 1.8E+02 0.0039 30.3 6.0 34 165-199 47-80 (326)
306 COG0552 FtsY Signal recognitio 23.1 4.6E+02 0.01 27.4 8.8 94 158-260 197-292 (340)
307 PRK05541 adenylylsulfate kinas 22.5 1.4E+02 0.0031 27.4 4.8 38 153-190 5-42 (176)
308 PLN02924 thymidylate kinase 22.1 2E+02 0.0044 28.0 5.9 42 152-193 13-54 (220)
309 cd02028 UMPK_like Uridine mono 22.0 2.9E+02 0.0063 25.7 6.8 38 157-194 1-38 (179)
310 PF14606 Lipase_GDSL_3: GDSL-l 21.6 1.6E+02 0.0034 27.9 4.8 52 174-234 50-101 (178)
311 PF06624 RAMP4: Ribosome assoc 21.4 58 0.0013 25.2 1.5 26 525-554 34-59 (63)
312 cd01828 sialate_O-acetylestera 21.4 2.9E+02 0.0063 24.9 6.6 72 157-233 23-94 (169)
313 cd01523 RHOD_Lact_B Member of 21.3 1.6E+02 0.0034 24.2 4.4 34 152-193 60-93 (100)
314 COG1089 Gmd GDP-D-mannose dehy 21.1 2.6E+02 0.0057 28.7 6.3 75 157-235 4-89 (345)
315 COG0552 FtsY Signal recognitio 21.1 1.5E+02 0.0033 30.9 4.9 38 152-189 136-173 (340)
316 PLN03016 sinapoylglucose-malat 20.8 1.7E+02 0.0037 31.8 5.5 59 350-413 347-429 (433)
317 COG3340 PepE Peptidase E [Amin 20.3 1.3E+02 0.0028 29.4 3.8 90 152-242 30-132 (224)
318 PF10605 3HBOH: 3HB-oligomer h 20.0 1.2E+02 0.0026 34.1 4.0 47 348-394 552-606 (690)
No 1
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=100.00 E-value=1e-68 Score=549.10 Aligned_cols=396 Identities=42% Similarity=0.741 Sum_probs=360.5
Q ss_pred HHhHHHHhcccchhHHHHHHHHHHHHHHHhhhhheeecccccccCCCCeEEEEcCChHHHHHHHhhcccccCCCCCCCCC
Q 008371 14 YNLLFKSLSLIPLSHYFLFIFLIFIIFLYNFLEIHFLRDLVTGFRGDPVYLTYSASSKLYQSLAAKCHVLHGRYLPTPWL 93 (568)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~cp~l~~~y~P~~wl 93 (568)
+.++++.....++..+.+..++.+.+++|.+.++++. .+++.+.+. +++|.++++++||.++++|.|++|+
T Consensus 2 ~~l~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~--------~~~~~l~~~-~~~f~~~l~~~~~~l~~~y~p~~w~ 72 (409)
T KOG1838|consen 2 LLLLFQSLLGPVLSPVLLGLLIGVAVVLYAFLYLKSP--------PRKPSLFCG-DSGFARFLVPKCPLLEEKYLPTLWL 72 (409)
T ss_pred ccccccccccccccHHHHHHhhhhheeeeecceeecc--------CCCCeeecC-chHHHHHHHhhccccccccccceee
Confidence 4567777777778888888788888888999998863 455555555 6899999999999999999999999
Q ss_pred CchhhHHhhhhhhcCCCCCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHH
Q 008371 94 SSPHLQTAFLTFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIK 173 (568)
Q Consensus 94 ~~ghlqT~~~~~~~~~p~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~ 173 (568)
++||+||++..+++++|.+.|+|++++++|||++++||+.+++.. + ..+++..|+||++||++|+|.+.|++
T Consensus 73 ~~ghlQT~~~~~~~~~p~~~y~Reii~~~DGG~~~lDW~~~~~~~-----~---~~~~~~~P~vvilpGltg~S~~~YVr 144 (409)
T KOG1838|consen 73 FSGHLQTLLLSFFGSKPPVEYTREIIKTSDGGTVTLDWVENPDSR-----C---RTDDGTDPIVVILPGLTGGSHESYVR 144 (409)
T ss_pred cCCeeeeeehhhcCCCCCCcceeEEEEeCCCCEEEEeeccCcccc-----c---CCCCCCCcEEEEecCCCCCChhHHHH
Confidence 999999999999999999999999999999999999999876521 1 12346779999999999999999999
Q ss_pred HHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCC
Q 008371 174 HLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTP 253 (568)
Q Consensus 174 ~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~ 253 (568)
+++..+.++||+|+++|.||+|+++.++++.|+++|++|+++++++++++||.++++++|+||||+++++|+++.+++++
T Consensus 145 ~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~ 224 (409)
T KOG1838|consen 145 HLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTP 224 (409)
T ss_pred HHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhh-hhhccCChhhhhccCCHHHHHHhhhcccCCCCC
Q 008371 254 LVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQS-TVARLADWEGITKSRSIRDFDNHATRVLGKFET 332 (568)
Q Consensus 254 I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~ 332 (568)
+.+++++|.|||.....+.+.+...+++|+++++.++++++..|.. .+.+..+++.+.+.+++++||+.++++.+||++
T Consensus 225 l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~ 304 (409)
T KOG1838|consen 225 LIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKS 304 (409)
T ss_pred ceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCc
Confidence 9999999999999888888888899999999999999999999888 556678899999999999999999999999999
Q ss_pred HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcc-cHHHHHHHH
Q 008371 333 VDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSL-WWVRAVNVF 411 (568)
Q Consensus 333 ~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~-w~~~~i~eF 411 (568)
.++||+.+|+.+++++|++|+|+|++.|||++|++.++...+..+|++.++++.+|||+||+||+.++.. |+.+.+.+|
T Consensus 305 ~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef 384 (409)
T KOG1838|consen 305 VDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEF 384 (409)
T ss_pred HHHHHhhcchhhhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999766655 555569999
Q ss_pred HHHhhcCCCCCCccc
Q 008371 412 LDALNTSPYVNRSTK 426 (568)
Q Consensus 412 L~~~~~~~~~~~~~~ 426 (568)
+.++.......+.+.
T Consensus 385 ~~~~~~~~~~~~~~~ 399 (409)
T KOG1838|consen 385 LGNAIFQDEVGRHRP 399 (409)
T ss_pred HHHHHhhhcccccCc
Confidence 999988776666553
No 2
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=100.00 E-value=1.6e-53 Score=422.28 Aligned_cols=318 Identities=35% Similarity=0.606 Sum_probs=289.2
Q ss_pred CCCC-CCCCCchhhHHhhh--hhhcCCCCCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCC
Q 008371 86 RYLP-TPWLSSPHLQTAFL--TFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPG 162 (568)
Q Consensus 86 ~y~P-~~wl~~ghlqT~~~--~~~~~~p~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHG 162 (568)
+|.| ++|++|||+||+++ ..+++++.+.|+||.+.++||+.+.+||..++. +..+|.||++||
T Consensus 18 ~f~p~~~~L~ng~lqTl~~~~~~frr~~~~~~~re~v~~pdg~~~~ldw~~~p~--------------~~~~P~vVl~HG 83 (345)
T COG0429 18 PFDPLPWGLFNGHLQTLYPSLRLFRRKPKVAYTRERLETPDGGFIDLDWSEDPR--------------AAKKPLVVLFHG 83 (345)
T ss_pred cCCCCcccccCcchhhhhhhHHHhhcccccccceEEEEcCCCCEEEEeeccCcc--------------ccCCceEEEEec
Confidence 4777 78999999999998 667888999999999999999999999998644 467799999999
Q ss_pred CCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHH
Q 008371 163 LTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILV 242 (568)
Q Consensus 163 l~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial 242 (568)
++|++.+.|++.+++.+.++||.||++|.|||+++..++++.|+.++++|++.++++++++++..|+.+||+||||+++.
T Consensus 84 L~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa 163 (345)
T COG0429 84 LEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLA 163 (345)
T ss_pred cCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhc-c-CC-hhhhhccCCHHHH
Q 008371 243 KYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVAR-L-AD-WEGITKSRSIRDF 319 (568)
Q Consensus 243 ~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~-~-~d-~~~i~~~~~l~~f 319 (568)
+|+++.++++++.+++++|.|+|+..+...+...+..++|.+.+...+++.+..+...+.. . .+ .+.+++.+++++|
T Consensus 164 ~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~~~~~ik~~~ti~eF 243 (345)
T COG0429 164 NYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRYLLRNLKRNAARKLKELEPSLPGTVLAAIKRCRTIREF 243 (345)
T ss_pred HHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHHHHHHHhcCcccCcHHHHHHHhhchHHhc
Confidence 9999999999999999999999999888888777655899999998888888776666522 2 22 4577888999999
Q ss_pred HHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcccccccccc
Q 008371 320 DNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITA 399 (568)
Q Consensus 320 d~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~ 399 (568)
|+.++.+.+||.++.+||+.+|+...+++|++|+|+||+.|||+++++.++......+|++.+..+++|||+||+.+...
T Consensus 244 D~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~ 323 (345)
T COG0429 244 DDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLL 323 (345)
T ss_pred cceeeecccCCCcHHHHHHhccccccccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccc
Confidence 99999999999999999999999999999999999999999999999999986666999999999999999999987433
Q ss_pred Cc-ccHHHHHHHHHHHhhc
Q 008371 400 KS-LWWVRAVNVFLDALNT 417 (568)
Q Consensus 400 ~~-~w~~~~i~eFL~~~~~ 417 (568)
.+ .|..+++.+||+...+
T Consensus 324 ~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 324 HPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred cchhhHHHHHHHHHHHHHh
Confidence 33 3999999999998764
No 3
>PLN02511 hydrolase
Probab=100.00 E-value=1.9e-50 Score=428.98 Aligned_cols=344 Identities=37% Similarity=0.666 Sum_probs=286.5
Q ss_pred EEEEcCChHHHHHHHhhcccccCCCCCCCCCCchhhHHhhhhhhcCCCCCCceEEEEEcCCCCEEEEEEeccCccccCCc
Q 008371 63 YLTYSASSKLYQSLAAKCHVLHGRYLPTPWLSSPHLQTAFLTFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQGST 142 (568)
Q Consensus 63 ~l~~~~~~~~~~~i~~~cp~l~~~y~P~~wl~~ghlqT~~~~~~~~~p~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~ 142 (568)
..++.+....+++++++||+|.++|.|++|++|||+||++..++++.+.++|+|+.+.++||+++.+||+.+...
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~l~~~y~p~~wl~n~h~qT~~~~~~~~~~~~~~~re~l~~~DG~~~~ldw~~~~~~----- 94 (388)
T PLN02511 20 HSSLEVIGGGRDSFLPKFKSLERPYDAFPLLGNRHVETIFASFFRSLPAVRYRRECLRTPDGGAVALDWVSGDDR----- 94 (388)
T ss_pred ccceeeccchHHHHHHhhhhhcCCccCCccCCCccHHHhhHHHhcCCCCCceeEEEEECCCCCEEEEEecCcccc-----
Confidence 344444445589999999999999999999999999999999998888899999999999999999999864220
Q ss_pred cccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH
Q 008371 143 HVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHC 222 (568)
Q Consensus 143 ~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~ 222 (568)
....++|+||++||++|++.+.|++.++..+.++||+|+++|+||||+|+.+.++.+..++++|+.+++++++.
T Consensus 95 ------~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~ 168 (388)
T PLN02511 95 ------ALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAG 168 (388)
T ss_pred ------cCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHH
Confidence 01346799999999998887778888888888999999999999999999877788888999999999999999
Q ss_pred HCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhh
Q 008371 223 QYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVA 302 (568)
Q Consensus 223 ~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 302 (568)
+++..+++++||||||+++++|++++++..+|.+++++++|+++......+... ....|...+...+++....+...+.
T Consensus 169 ~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~~~~~~~-~~~~y~~~~~~~l~~~~~~~~~~~~ 247 (388)
T PLN02511 169 RYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIADEDFHKG-FNNVYDKALAKALRKIFAKHALLFE 247 (388)
T ss_pred HCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999889999999999999999999999855699999999999875444333332 2356666666666555544333332
Q ss_pred c---cCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCC
Q 008371 303 R---LADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEK 379 (568)
Q Consensus 303 ~---~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~ 379 (568)
. ..+...+.+.+++.+|++.++.+..+|.+.++||...+....+.+|++|+|+|+|+||+++|.+..+......+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~ 327 (388)
T PLN02511 248 GLGGEYNIPLVANAKTVRDFDDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPN 327 (388)
T ss_pred hCCCccCHHHHHhCCCHHHHHHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCC
Confidence 2 2344556677899999999999999999999999999999999999999999999999999988776556678899
Q ss_pred EEEEEeCCCCcccccccccc--CcccHHHHHHHHHHHhhcC
Q 008371 380 IILATTRHGGHLAFYEGITA--KSLWWVRAVNVFLDALNTS 418 (568)
Q Consensus 380 ~~l~~~~~GGH~~f~eg~~~--~~~w~~~~i~eFL~~~~~~ 418 (568)
++++++++|||++|+|+... ...|+++.+.+||+.+.+.
T Consensus 328 ~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl~~~~~~ 368 (388)
T PLN02511 328 CLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFLEALEEG 368 (388)
T ss_pred EEEEECCCcceeccccCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 99999999999999997321 2459999999999988754
No 4
>PRK10985 putative hydrolase; Provisional
Probab=100.00 E-value=9.3e-45 Score=376.99 Aligned_cols=318 Identities=26% Similarity=0.420 Sum_probs=265.4
Q ss_pred CCCCCCCCCCchhhHHhhhhhhcCCCCCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCC
Q 008371 85 GRYLPTPWLSSPHLQTAFLTFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT 164 (568)
Q Consensus 85 ~~y~P~~wl~~ghlqT~~~~~~~~~p~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~ 164 (568)
.+|.||+|+.|||+||++..++++.+.+.++|+.++++||+.+.++|...+. ....+|+||++||++
T Consensus 2 ~~~~p~~~~~~~h~qt~~~~~~~~~~~~~~~~~~~~~~dg~~~~l~w~~~~~-------------~~~~~p~vll~HG~~ 68 (324)
T PRK10985 2 AEFTPMRGASNPHLQTLLPRLIRRKVLFTPYWQRLELPDGDFVDLAWSEDPA-------------QARHKPRLVLFHGLE 68 (324)
T ss_pred CCCCCCcCCCCCcHHHhhHHHhcCCCCCCcceeEEECCCCCEEEEecCCCCc-------------cCCCCCEEEEeCCCC
Confidence 4699999999999999999999888889999999999999999999975422 134579999999999
Q ss_pred CCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHH
Q 008371 165 SDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKY 244 (568)
Q Consensus 165 G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~y 244 (568)
|++.+.|+..++..|.++||+|+++|+||||+++...++.+..+.++|+.+++++++++++..+++++||||||++++.|
T Consensus 69 g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~ 148 (324)
T PRK10985 69 GSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACL 148 (324)
T ss_pred CCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHH
Confidence 88777788889999999999999999999999876656667777889999999999998888899999999999999999
Q ss_pred HHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhc--cCChhhhhccCCHHHHHHh
Q 008371 245 LGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVAR--LADWEGITKSRSIRDFDNH 322 (568)
Q Consensus 245 a~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~d~~~i~~~~~l~~fd~~ 322 (568)
+++++++.+++++|++++|+++..+...+... ..++|...+...++.........+.. ..+.+.+...+++++||+.
T Consensus 149 ~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~ 227 (324)
T PRK10985 149 LAKEGDDLPLDAAVIVSAPLMLEACSYRMEQG-FSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDL 227 (324)
T ss_pred HHhhCCCCCccEEEEEcCCCCHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhh
Confidence 99987654699999999999987665554443 24566666655555443332222222 2345567778899999999
Q ss_pred hhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccc-cCc
Q 008371 323 ATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGIT-AKS 401 (568)
Q Consensus 323 ~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~-~~~ 401 (568)
++.+..+|.+..+||...+....+++|++|+|+|+|++|++++.+..+. ..+..+++.++++++|||++|+||.. ...
T Consensus 228 ~~~~~~g~~~~~~~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~GH~~~~~g~~~~~~ 306 (324)
T PRK10985 228 ITARIHGFADAIDYYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPK-PESLPPNVEYQLTEHGGHVGFVGGTLLKPQ 306 (324)
T ss_pred heeccCCCCCHHHHHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChH-HHHhCCCeEEEECCCCCceeeCCCCCCCCC
Confidence 9999999999999999999889999999999999999999999887765 34667899999999999999999853 345
Q ss_pred ccHHHHHHHHHHHhhc
Q 008371 402 LWWVRAVNVFLDALNT 417 (568)
Q Consensus 402 ~w~~~~i~eFL~~~~~ 417 (568)
.|+.+.+.+|++.+..
T Consensus 307 ~w~~~~~~~~~~~~~~ 322 (324)
T PRK10985 307 MWLEQRIPDWLTTYLE 322 (324)
T ss_pred ccHHHHHHHHHHHhhc
Confidence 7999999999987653
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=1.6e-24 Score=225.52 Aligned_cols=280 Identities=15% Similarity=0.122 Sum_probs=169.2
Q ss_pred CCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEc
Q 008371 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (568)
Q Consensus 111 ~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D 190 (568)
.+.+++..+...||.++.+..+.+.+. ...+++||++||++++. .+++..++..|+++||+|+++|
T Consensus 29 ~~~~~~~~~~~~dg~~l~~~~~~~~~~-------------~~~~~~VvllHG~~~~~-~~~~~~~~~~L~~~Gy~V~~~D 94 (330)
T PLN02298 29 GIKGSKSFFTSPRGLSLFTRSWLPSSS-------------SPPRALIFMVHGYGNDI-SWTFQSTAIFLAQMGFACFALD 94 (330)
T ss_pred CCccccceEEcCCCCEEEEEEEecCCC-------------CCCceEEEEEcCCCCCc-ceehhHHHHHHHhCCCEEEEec
Confidence 367788889999999999876554321 24578999999996543 3344667888999999999999
Q ss_pred CCCCCCCCCCCCCC-CCCCcHHHHHHHHHHHHHH--CCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChh
Q 008371 191 HRGLGGISLTSDCF-YNGGWTEDLRRVIDYLHCQ--YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (568)
Q Consensus 191 ~RG~G~S~~~~~~~-~~~~~~~Dl~~vi~~l~~~--~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~ 267 (568)
+||||.|+...... ......+|+.+++++++.. ++..+++++||||||++++.++.++|+ +++++|++++.....
T Consensus 95 ~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~ 172 (330)
T PLN02298 95 LEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE--GFDGAVLVAPMCKIS 172 (330)
T ss_pred CCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc--cceeEEEecccccCC
Confidence 99999997432211 1123568999999999764 345689999999999999999999887 799999998865432
Q ss_pred hhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCC---C---HHHHHHhC-
Q 008371 268 ICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFE---T---VDAYYRHS- 340 (568)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~---~---~~~yy~~~- 340 (568)
.... ......... .. +..+.. .+........+...................+. . .....+..
T Consensus 173 ~~~~--~~~~~~~~~-~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (330)
T PLN02298 173 DKIR--PPWPIPQIL-TF----VARFLP----TLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTD 241 (330)
T ss_pred cccC--CchHHHHHH-HH----HHHHCC----CCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHH
Confidence 2100 000000000 00 000000 00000000000000000000000000000111 0 11111111
Q ss_pred CcccccCCCccceEEEEeCCCCCCCCCCcchHHH-hcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhhc
Q 008371 341 SSANFVRNVSVPLLCISTLDDPVCTREAIPWDEC-RANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (568)
Q Consensus 341 s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~-~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~ 417 (568)
.....+.+|++|+|+|+|++|+++|++....... ...++.++++++++||..+++........+.+.+.+||++...
T Consensus 242 ~~~~~l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~ 319 (330)
T PLN02298 242 YLGKKLKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCT 319 (330)
T ss_pred HHHHhhhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhcc
Confidence 0134577899999999999999999886654322 2346789999999999998863211123567888899988653
No 6
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.92 E-value=3.1e-24 Score=225.38 Aligned_cols=279 Identities=15% Similarity=0.128 Sum_probs=164.2
Q ss_pred CCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEc
Q 008371 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (568)
Q Consensus 111 ~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D 190 (568)
.+.+++.++..+||.++.+..+.|.+ +..+|+|||+||+++++ ..|++.++..|+++||+|+++|
T Consensus 58 ~~~~~~~~~~~~~g~~l~~~~~~p~~--------------~~~~~~iv~lHG~~~~~-~~~~~~~~~~l~~~g~~v~~~D 122 (349)
T PLN02385 58 GIKTEESYEVNSRGVEIFSKSWLPEN--------------SRPKAAVCFCHGYGDTC-TFFFEGIARKIASSGYGVFAMD 122 (349)
T ss_pred CcceeeeeEEcCCCCEEEEEEEecCC--------------CCCCeEEEEECCCCCcc-chHHHHHHHHHHhCCCEEEEec
Confidence 44555556666777777665444422 24578999999996543 3455788899998999999999
Q ss_pred CCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHH--CCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChh
Q 008371 191 HRGLGGISLTSDCFYN-GGWTEDLRRVIDYLHCQ--YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (568)
Q Consensus 191 ~RG~G~S~~~~~~~~~-~~~~~Dl~~vi~~l~~~--~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~ 267 (568)
+||||.|+........ ..+.+|+.++++.+... ++..+++++||||||++++.++.++|+ +++++|++++.....
T Consensus 123 ~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~--~v~glVLi~p~~~~~ 200 (349)
T PLN02385 123 YPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN--AWDGAILVAPMCKIA 200 (349)
T ss_pred CCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcc--hhhheeEeccccccc
Confidence 9999999864322111 34567888888877653 345589999999999999999999988 799999998755432
Q ss_pred hhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhccc---CCCCCHHHHHHhC-Ccc
Q 008371 268 ICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVL---GKFETVDAYYRHS-SSA 343 (568)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~---~g~~~~~~yy~~~-s~~ 343 (568)
... ........+... +...+..........+... ........+......... ..+....+.++.. ...
T Consensus 201 ~~~--~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 272 (349)
T PLN02385 201 DDV--VPPPLVLQILIL-LANLLPKAKLVPQKDLAEL-----AFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIE 272 (349)
T ss_pred ccc--cCchHHHHHHHH-HHHHCCCceecCCCccccc-----cccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHH
Confidence 110 000000111100 0000000000000000000 000000000000000000 0111112222211 223
Q ss_pred cccCCCccceEEEEeCCCCCCCCCCcchHHHh-cCCCEEEEEeCCCCccccccccccCc--ccHHHHHHHHHHHhh
Q 008371 344 NFVRNVSVPLLCISTLDDPVCTREAIPWDECR-ANEKIILATTRHGGHLAFYEGITAKS--LWWVRAVNVFLDALN 416 (568)
Q Consensus 344 ~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~-~~~~~~l~~~~~GGH~~f~eg~~~~~--~w~~~~i~eFL~~~~ 416 (568)
..+.+|++|+|+|+|++|.++|++........ ..+++++.+++++||..+.|. ++. .-+.+.+.+||++..
T Consensus 273 ~~l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~--p~~~~~~v~~~i~~wL~~~~ 346 (349)
T PLN02385 273 MQLEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGE--PDEMIFQVLDDIISWLDSHS 346 (349)
T ss_pred HhcccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCC--ChhhHHHHHHHHHHHHHHhc
Confidence 45788999999999999999998765543222 346789999999999988763 221 126678899998764
No 7
>PHA02857 monoglyceride lipase; Provisional
Probab=99.92 E-value=2.2e-23 Score=211.05 Aligned_cols=263 Identities=14% Similarity=0.127 Sum_probs=161.4
Q ss_pred EEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCC
Q 008371 118 LFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGI 197 (568)
Q Consensus 118 ~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S 197 (568)
.+..+||..+.+.++.|.+ ..+++|+++||+++ +...| ..++..|+++||+|+++|+||||.|
T Consensus 4 ~~~~~~g~~l~~~~~~~~~---------------~~~~~v~llHG~~~-~~~~~-~~~~~~l~~~g~~via~D~~G~G~S 66 (276)
T PHA02857 4 CMFNLDNDYIYCKYWKPIT---------------YPKALVFISHGAGE-HSGRY-EELAENISSLGILVFSHDHIGHGRS 66 (276)
T ss_pred eeecCCCCEEEEEeccCCC---------------CCCEEEEEeCCCcc-ccchH-HHHHHHHHhCCCEEEEccCCCCCCC
Confidence 4566799999998776632 35688888899965 34344 7899999999999999999999999
Q ss_pred CCCCCCCCC-CCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHH
Q 008371 198 SLTSDCFYN-GGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRR 276 (568)
Q Consensus 198 ~~~~~~~~~-~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~ 276 (568)
+........ ..+.+|+.+.++++++.++..+++++||||||++++.++.++++ +++++|+++++...... ..
T Consensus 67 ~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~--~i~~lil~~p~~~~~~~-~~---- 139 (276)
T PHA02857 67 NGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPN--LFTAMILMSPLVNAEAV-PR---- 139 (276)
T ss_pred CCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCcc--ccceEEEeccccccccc-cH----
Confidence 753211111 22456777777777777777899999999999999999999888 79999999986542110 00
Q ss_pred HHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccC--CCCCH---HHHHHh-CCcccccCCCc
Q 008371 277 LVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLG--KFETV---DAYYRH-SSSANFVRNVS 350 (568)
Q Consensus 277 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~--g~~~~---~~yy~~-~s~~~~l~~I~ 350 (568)
.......+. ..... .... .......+ .+...+.......+.. ..... ...... ......+.+++
T Consensus 140 --~~~~~~~~~----~~~~~-~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 209 (276)
T PHA02857 140 --LNLLAAKLM----GIFYP-NKIV-GKLCPESV--SRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIK 209 (276)
T ss_pred --HHHHHHHHH----HHhCC-CCcc-CCCCHhhc--cCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCC
Confidence 000000000 00000 0000 00000000 0001111011000000 00000 111111 11234678999
Q ss_pred cceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHh
Q 008371 351 VPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (568)
Q Consensus 351 vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~ 415 (568)
+|+|+|+|++|.++|++..........+++++.+++++||+.+.|.. .....+.+.+.+||+..
T Consensus 210 ~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~-~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 210 TPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETD-EVKKSVMKEIETWIFNR 273 (276)
T ss_pred CCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCch-hHHHHHHHHHHHHHHHh
Confidence 99999999999999988765543334457899999999999998831 11234667888898864
No 8
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.89 E-value=2.1e-22 Score=204.21 Aligned_cols=247 Identities=14% Similarity=0.137 Sum_probs=149.1
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEE
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAV 232 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lv 232 (568)
..++|||+||+++++ ..| ..+++.|.+ +|+|+++|+||||.|+..........+.+|+.++++++. ..+++++
T Consensus 24 ~~~plvllHG~~~~~-~~w-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~----~~~~~Lv 96 (276)
T TIGR02240 24 GLTPLLIFNGIGANL-ELV-FPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD----YGQVNAI 96 (276)
T ss_pred CCCcEEEEeCCCcch-HHH-HHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC----cCceEEE
Confidence 346799999996644 344 678888865 799999999999999754322222445677777777763 3589999
Q ss_pred EecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHH-HHHHHHHHHHHHhHhhHHhhhhhhhcc--CChhh
Q 008371 233 GTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRL-VQKCYDRVIAIGLRGFAQLHQSTVARL--ADWEG 309 (568)
Q Consensus 233 G~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~-~~~~~~~~l~~~l~~~~~~~~~~~~~~--~d~~~ 309 (568)
||||||.+++.++.++|+ +|+++|+++++.............. .... ..... .... .......+... .+.+.
T Consensus 97 G~S~GG~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~-~~~~~~~~~~~~~~~~~~ 171 (276)
T TIGR02240 97 GVSWGGALAQQFAHDYPE--RCKKLILAATAAGAVMVPGKPKVLMMMASP-RRYIQ-PSHG-IHIAPDIYGGAFRRDPEL 171 (276)
T ss_pred EECHHHHHHHHHHHHCHH--HhhheEEeccCCccccCCCchhHHHHhcCc-hhhhc-cccc-cchhhhhccceeeccchh
Confidence 999999999999999998 8999999998654211000000000 0000 00000 0000 00000000000 00000
Q ss_pred hhccCCHHHHHHhhhcccCCCCCHHHHHH--hCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC
Q 008371 310 ITKSRSIRDFDNHATRVLGKFETVDAYYR--HSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRH 387 (568)
Q Consensus 310 i~~~~~l~~fd~~~~~~~~g~~~~~~yy~--~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~ 387 (568)
...+.... ...........+.. .......+.+|++|+|+|+|++|+++|++.... .....++.++++++
T Consensus 172 ------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~-l~~~~~~~~~~~i~- 242 (276)
T TIGR02240 172 ------AMAHASKV-RSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRL-LAWRIPNAELHIID- 242 (276)
T ss_pred ------hhhhhhhc-ccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHH-HHHhCCCCEEEEEc-
Confidence 00000000 00000000111111 111234578999999999999999999886654 45667888999997
Q ss_pred CCccccccccccCcccHHHHHHHHHHHhhcCCCCCCc
Q 008371 388 GGHLAFYEGITAKSLWWVRAVNVFLDALNTSPYVNRS 424 (568)
Q Consensus 388 GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~~~~~~~~ 424 (568)
+||+.+.| .+..+.+.+.+|++......++|.+
T Consensus 243 ~gH~~~~e----~p~~~~~~i~~fl~~~~~~~~~~~~ 275 (276)
T TIGR02240 243 DGHLFLIT----RAEAVAPIIMKFLAEERQRAVMHPR 275 (276)
T ss_pred CCCchhhc----cHHHHHHHHHHHHHHhhhhccCCCC
Confidence 59999987 4557899999999999888888754
No 9
>PRK10749 lysophospholipase L2; Provisional
Probab=99.89 E-value=1.5e-22 Score=210.89 Aligned_cols=289 Identities=16% Similarity=0.127 Sum_probs=166.7
Q ss_pred hhHHhhhhhhcCCCCCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHH
Q 008371 97 HLQTAFLTFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLA 176 (568)
Q Consensus 97 hlqT~~~~~~~~~p~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~ 176 (568)
..|++...++. ..+...+...||..+.+..+.+. +.+++||++||+++ +...| ..++
T Consensus 18 ~~~~~~~~~~~-----~~~~~~~~~~~g~~l~~~~~~~~----------------~~~~~vll~HG~~~-~~~~y-~~~~ 74 (330)
T PRK10749 18 FTMGPLLDFWR-----QREEAEFTGVDDIPIRFVRFRAP----------------HHDRVVVICPGRIE-SYVKY-AELA 74 (330)
T ss_pred HHHHHHHHHHh-----hccceEEEcCCCCEEEEEEccCC----------------CCCcEEEEECCccc-hHHHH-HHHH
Confidence 45666666652 33456677789988887665431 24578999999964 44455 6788
Q ss_pred HHHHhCCceEEEEcCCCCCCCCCCCCC---C---CCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCC
Q 008371 177 FKMAGHGWNVVVSNHRGLGGISLTSDC---F---YNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGV 250 (568)
Q Consensus 177 ~~l~~~Gy~Vvv~D~RG~G~S~~~~~~---~---~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~ 250 (568)
..++++||+|+++|+||||.|+...+. . ....+.+|+.++++.+...++..+++++||||||.+++.++.++++
T Consensus 75 ~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~ 154 (330)
T PRK10749 75 YDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPG 154 (330)
T ss_pred HHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCC
Confidence 888899999999999999999753221 1 1134567888888887766677899999999999999999999988
Q ss_pred CCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHH-HhHhhHHhhhhhhhccC-ChhhhhccC-CHHHHHHhh-hcc
Q 008371 251 NTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAI-GLRGFAQLHQSTVARLA-DWEGITKSR-SIRDFDNHA-TRV 326 (568)
Q Consensus 251 ~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~-~l~~~~~~~~~~~~~~~-d~~~i~~~~-~l~~fd~~~-~~~ 326 (568)
.++++|++++......... ......+....... ................. ....+.... ...++.+.+ ..+
T Consensus 155 --~v~~lvl~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 229 (330)
T PRK10749 155 --VFDAIALCAPMFGIVLPLP---SWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDP 229 (330)
T ss_pred --CcceEEEECchhccCCCCC---cHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCC
Confidence 7999999987543211100 00001111100000 00000000000000000 000000000 000111111 111
Q ss_pred c--CCCCCH---HHHHHh-CCcccccCCCccceEEEEeCCCCCCCCCCcchHHHh------cCCCEEEEEeCCCCccccc
Q 008371 327 L--GKFETV---DAYYRH-SSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECR------ANEKIILATTRHGGHLAFY 394 (568)
Q Consensus 327 ~--~g~~~~---~~yy~~-~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~------~~~~~~l~~~~~GGH~~f~ 394 (568)
. .+.... .+.... ......+.++++|+|+|+|++|++++++........ ..+++++++++++||..+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~ 309 (330)
T PRK10749 230 ELRVGGPTYHWVRESILAGEQVLAGAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILF 309 (330)
T ss_pred CcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhh
Confidence 0 000111 111111 112345678999999999999999998754432111 1256789999999999998
Q ss_pred cccccCcccHHHHHHHHHHH
Q 008371 395 EGITAKSLWWVRAVNVFLDA 414 (568)
Q Consensus 395 eg~~~~~~w~~~~i~eFL~~ 414 (568)
|... ...-+.+.|.+||++
T Consensus 310 E~~~-~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 310 EKDA-MRSVALNAIVDFFNR 328 (330)
T ss_pred CCcH-HHHHHHHHHHHHHhh
Confidence 8311 123455778888875
No 10
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.89 E-value=5.4e-22 Score=202.98 Aligned_cols=242 Identities=14% Similarity=0.148 Sum_probs=141.3
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCC------CCC-CCcHHHHHHHHHHHHHHCCC
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDC------FYN-GGWTEDLRRVIDYLHCQYPE 226 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~------~~~-~~~~~Dl~~vi~~l~~~~~~ 226 (568)
.|+|||+||+++++. .| +.++..|.++ |+|+++|+||||.|+...+. .|+ ..+.+|+.++++.+ ..
T Consensus 29 ~~~vlllHG~~~~~~-~w-~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l----~~ 101 (294)
T PLN02824 29 GPALVLVHGFGGNAD-HW-RKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV----VG 101 (294)
T ss_pred CCeEEEECCCCCChh-HH-HHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh----cC
Confidence 478999999976543 45 6788888875 79999999999999864321 122 33445666666554 34
Q ss_pred CcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhh--hHHHhHHHHHHHHHHHHHHHh-HhhHH------hh
Q 008371 227 VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLIC--DRFINRRLVQKCYDRVIAIGL-RGFAQ------LH 297 (568)
Q Consensus 227 ~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~--~~~~~~~~~~~~~~~~l~~~l-~~~~~------~~ 297 (568)
.+++++||||||++++.++.++|+ +|+++|+++++...... .....+.....+......... +.+.. ..
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~~~p~--~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAVDAPE--LVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETV 179 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHHhChh--heeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHH
Confidence 689999999999999999999998 89999999875421100 000001000000000000000 00000 00
Q ss_pred hhhhhc-cCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhC------CcccccCCCccceEEEEeCCCCCCCCCCcc
Q 008371 298 QSTVAR-LADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHS------SSANFVRNVSVPLLCISTLDDPVCTREAIP 370 (568)
Q Consensus 298 ~~~~~~-~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~------s~~~~l~~I~vPvLiI~G~dDpivp~~~~~ 370 (568)
...+.. ..+... .. .+..+.+............+.... .....+++|++|+|+|+|++|+++|.+...
T Consensus 180 ~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~~~~~~~~~ 254 (294)
T PLN02824 180 KNILCQCYHDDSA----VT-DELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDPWEPVELGR 254 (294)
T ss_pred HHHHHHhccChhh----cc-HHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCCCCChHHHH
Confidence 000000 000000 00 000011110000000001111100 112457889999999999999999987665
Q ss_pred hHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHH
Q 008371 371 WDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (568)
Q Consensus 371 ~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~ 414 (568)
. .....++.++++++++||+.++| .+..+.+.|.+|+++
T Consensus 255 ~-~~~~~~~~~~~~i~~~gH~~~~e----~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 255 A-YANFDAVEDFIVLPGVGHCPQDE----APELVNPLIESFVAR 293 (294)
T ss_pred H-HHhcCCccceEEeCCCCCChhhh----CHHHHHHHHHHHHhc
Confidence 5 45567778999999999999998 556799999999975
No 11
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.89 E-value=1.1e-21 Score=200.96 Aligned_cols=272 Identities=18% Similarity=0.179 Sum_probs=174.2
Q ss_pred CceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCC
Q 008371 113 SYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (568)
Q Consensus 113 ~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~R 192 (568)
...+..+...||..+.+.-+.+.. +.+.+||++||+.. +...| ..++..|..+||.|+++|+|
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~~---------------~~~g~Vvl~HG~~E-h~~ry-~~la~~l~~~G~~V~~~D~R 70 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAPE---------------PPKGVVVLVHGLGE-HSGRY-EELADDLAARGFDVYALDLR 70 (298)
T ss_pred ccccceeecCCCceEEEEeecCCC---------------CCCcEEEEecCchH-HHHHH-HHHHHHHHhCCCEEEEecCC
Confidence 446678899999999887665422 33378999999954 55567 67999999999999999999
Q ss_pred CCCCCC-CCCCCCC-CCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhh
Q 008371 193 GLGGIS-LTSDCFY-NGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICD 270 (568)
Q Consensus 193 G~G~S~-~~~~~~~-~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~ 270 (568)
|||.|. ......- ...+.+|+.++++.+...++..|++++||||||.|++.|+.+++. +|+++|+.+|.+....
T Consensus 71 GhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~--~i~~~vLssP~~~l~~-- 146 (298)
T COG2267 71 GHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPP--RIDGLVLSSPALGLGG-- 146 (298)
T ss_pred CCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCc--cccEEEEECccccCCh--
Confidence 999997 3222211 134568999999999888888999999999999999999999996 8999999988776652
Q ss_pred HHHhHHHHHHHHHHHHHHHhHhhHH---hhhhhhhccCChhhhhccCCHHHHHHhhhccc--CCCCC---HHHHHHhCC-
Q 008371 271 RFINRRLVQKCYDRVIAIGLRGFAQ---LHQSTVARLADWEGITKSRSIRDFDNHATRVL--GKFET---VDAYYRHSS- 341 (568)
Q Consensus 271 ~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~--~g~~~---~~~yy~~~s- 341 (568)
..... .........+.+... ... .......... ..+.....+.....+. .+..+ +..+.....
T Consensus 147 -~~~~~----~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~--~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~ 218 (298)
T COG2267 147 -AILRL----ILARLALKLLGRIRPKLPVDS-NLLEGVLTDD--LSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRV 218 (298)
T ss_pred -hHHHH----HHHHHhcccccccccccccCc-ccccCcCcch--hhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcc
Confidence 00000 000111100100000 000 0000000000 0122222222222221 11111 122222222
Q ss_pred -cccccCCCccceEEEEeCCCCCCC-CCCc-chHHHhcCCCEEEEEeCCCCccccccccccCc--ccHHHHHHHHHHHhh
Q 008371 342 -SANFVRNVSVPLLCISTLDDPVCT-REAI-PWDECRANEKIILATTRHGGHLAFYEGITAKS--LWWVRAVNVFLDALN 416 (568)
Q Consensus 342 -~~~~l~~I~vPvLiI~G~dDpivp-~~~~-~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~--~w~~~~i~eFL~~~~ 416 (568)
......++++|+|+++|++|++++ .+.. ++......+++.+.+++++.|-.+.|. +. ..+.+.+.+|+....
T Consensus 219 ~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~---~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 219 PALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEP---DRAREEVLKDILAWLAEAL 295 (298)
T ss_pred cchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCc---chHHHHHHHHHHHHHHhhc
Confidence 233456889999999999999999 4533 344556788899999999999999983 33 456677788877543
No 12
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.89 E-value=1.5e-21 Score=207.50 Aligned_cols=271 Identities=18% Similarity=0.176 Sum_probs=167.2
Q ss_pred ceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCC
Q 008371 114 YKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (568)
Q Consensus 114 y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG 193 (568)
+....+..+||..+.+..+.|.. .+.+|+||++||++++ ...| ..++..|+++||+|+++|+||
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~~--------------~~~~~~Vl~lHG~~~~-~~~~-~~~a~~L~~~Gy~V~~~D~rG 173 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPAA--------------GEMRGILIIIHGLNEH-SGRY-LHFAKQLTSCGFGVYAMDWIG 173 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCCC--------------CCCceEEEEECCchHH-HHHH-HHHHHHHHHCCCEEEEeCCCC
Confidence 45556777888888777665532 2457899999999653 3345 689999999999999999999
Q ss_pred CCCCCCCCCCCCC-CCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCC-CCCceEEEEEcCCCChhhhhH
Q 008371 194 LGGISLTSDCFYN-GGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGV-NTPLVGAAAICSPWDLLICDR 271 (568)
Q Consensus 194 ~G~S~~~~~~~~~-~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~-~~~I~a~V~is~p~d~~~~~~ 271 (568)
||.|+........ ..+.+|+.++++++..+++..+++++||||||.+++.++. +++ ..+++++|+.++.........
T Consensus 174 hG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~ 252 (395)
T PLN02652 174 HGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHP 252 (395)
T ss_pred CCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchH
Confidence 9999864322212 2345899999999998887779999999999999997764 443 226999999877654432111
Q ss_pred HHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhccc--CCCCCHH---HHHHhCC-cccc
Q 008371 272 FINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVL--GKFETVD---AYYRHSS-SANF 345 (568)
Q Consensus 272 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~--~g~~~~~---~yy~~~s-~~~~ 345 (568)
... ....++... ...+. +.. .+.......+...........+. .+..... +.++... ....
T Consensus 253 -~~~-~~~~l~~~~----~p~~~------~~~-~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~ 319 (395)
T PLN02652 253 -IVG-AVAPIFSLV----APRFQ------FKG-ANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRN 319 (395)
T ss_pred -HHH-HHHHHHHHh----CCCCc------ccC-cccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhh
Confidence 000 001111110 00000 000 00000000000111111111110 0111111 1111111 1345
Q ss_pred cCCCccceEEEEeCCCCCCCCCCcchHHHh-cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhhc
Q 008371 346 VRNVSVPLLCISTLDDPVCTREAIPWDECR-ANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (568)
Q Consensus 346 l~~I~vPvLiI~G~dDpivp~~~~~~~~~~-~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~ 417 (568)
+.+|++|+|+++|++|.++|++........ .+++..+.++++++|..++| +.+..+.+.+.+||+...+
T Consensus 320 L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e---~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 320 FKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFE---PEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred cccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccC---CCHHHHHHHHHHHHHHHhh
Confidence 788999999999999999998766553333 44568899999999999887 4556788999999997654
No 13
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.89 E-value=2.4e-22 Score=206.60 Aligned_cols=268 Identities=14% Similarity=0.105 Sum_probs=150.9
Q ss_pred CCCCCceEEEEEcCC--CCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceE
Q 008371 109 APDISYKRHLFQTPD--GGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNV 186 (568)
Q Consensus 109 ~p~~~y~r~~~~~~D--Gg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~V 186 (568)
.+.+++...++.+.+ |+.+.+.+... + ++++|+|||+||++++ ...| ..++..|.++||+|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~i~y~~~-G--------------~~~~~~lvliHG~~~~-~~~w-~~~~~~L~~~gy~v 76 (302)
T PRK00870 14 LPDYPFAPHYVDVDDGDGGPLRMHYVDE-G--------------PADGPPVLLLHGEPSW-SYLY-RKMIPILAAAGHRV 76 (302)
T ss_pred CcCCCCCceeEeecCCCCceEEEEEEec-C--------------CCCCCEEEEECCCCCc-hhhH-HHHHHHHHhCCCEE
Confidence 445566666666664 56555544322 1 1245789999999653 4445 68899998889999
Q ss_pred EEEcCCCCCCCCCCCC-CCCC-CCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCC
Q 008371 187 VVSNHRGLGGISLTSD-CFYN-GGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (568)
Q Consensus 187 vv~D~RG~G~S~~~~~-~~~~-~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~ 264 (568)
+++|+||||.|+.... ..+. ..+.+|+.++++.+ +..+++++||||||.+++.++.++|+ +|+++|++++..
T Consensus 77 i~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l----~~~~v~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 150 (302)
T PRK00870 77 IAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL----DLTDVTLVCQDWGGLIGLRLAAEHPD--RFARLVVANTGL 150 (302)
T ss_pred EEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc----CCCCEEEEEEChHHHHHHHHHHhChh--heeEEEEeCCCC
Confidence 9999999999975422 1122 23345555555443 44589999999999999999999988 899999998643
Q ss_pred Chhhh--hHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhc----------cCCHHHHHHhhhcccCCCCC
Q 008371 265 DLLIC--DRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITK----------SRSIRDFDNHATRVLGKFET 332 (568)
Q Consensus 265 d~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~----------~~~l~~fd~~~~~~~~g~~~ 332 (568)
..... ..... .+ ..+........+...... ........+.... ......+.... ..+...
T Consensus 151 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 222 (302)
T PRK00870 151 PTGDGPMPDAFW-AW-RAFSQYSPVLPVGRLVNG---GTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLV---PTSPDD 222 (302)
T ss_pred CCccccchHHHh-hh-hcccccCchhhHHHHhhc---cccccCCHHHHHHhhcccCChhhhcchhhhhhcC---CCCCCC
Confidence 21110 00000 00 000000000000000000 0000000000000 00000000000 000000
Q ss_pred HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEE---EEEeCCCCccccccccccCcccHHHHHH
Q 008371 333 VDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKII---LATTRHGGHLAFYEGITAKSLWWVRAVN 409 (568)
Q Consensus 333 ~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~---l~~~~~GGH~~f~eg~~~~~~w~~~~i~ 409 (568)
.. ..........+.+|++|+++|+|++|+++|.+. .. .....++.. +++++++||+.++| .+..+.+.+.
T Consensus 223 ~~-~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~-~~~~~~~~~~~~~~~i~~~gH~~~~e----~p~~~~~~l~ 295 (302)
T PRK00870 223 PA-VAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AI-LQKRIPGAAGQPHPTIKGAGHFLQED----SGEELAEAVL 295 (302)
T ss_pred cc-hHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HH-HHhhcccccccceeeecCCCccchhh----ChHHHHHHHH
Confidence 00 000000123467899999999999999999765 33 555566655 88999999999988 4557889999
Q ss_pred HHHHH
Q 008371 410 VFLDA 414 (568)
Q Consensus 410 eFL~~ 414 (568)
+|++.
T Consensus 296 ~fl~~ 300 (302)
T PRK00870 296 EFIRA 300 (302)
T ss_pred HHHhc
Confidence 99875
No 14
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.89 E-value=7.3e-22 Score=202.07 Aligned_cols=244 Identities=15% Similarity=0.131 Sum_probs=142.2
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG 233 (568)
+|.||++||++++ ...| +.+++.|.+++ +|+++|+||||.|+.+........+++|+.++++.+. ..+++++|
T Consensus 27 g~~vvllHG~~~~-~~~w-~~~~~~L~~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~----~~~~~lvG 99 (295)
T PRK03592 27 GDPIVFLHGNPTS-SYLW-RNIIPHLAGLG-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALG----LDDVVLVG 99 (295)
T ss_pred CCEEEEECCCCCC-HHHH-HHHHHHHhhCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC----CCCeEEEE
Confidence 4679999999754 4445 78899998875 9999999999999865432222345567776666653 46899999
Q ss_pred ecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHh-hH----Hhhhhhhhc----c
Q 008371 234 TSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRG-FA----QLHQSTVAR----L 304 (568)
Q Consensus 234 ~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~----~~~~~~~~~----~ 304 (568)
|||||.+++.++..+|+ +|+++|+++++........+ .... ...+.......+.. .. ......+.. .
T Consensus 100 hS~Gg~ia~~~a~~~p~--~v~~lil~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (295)
T PRK03592 100 HDWGSALGFDWAARHPD--RVRGIAFMEAIVRPMTWDDF-PPAV-RELFQALRSPGEGEEMVLEENVFIERVLPGSILRP 175 (295)
T ss_pred ECHHHHHHHHHHHhChh--heeEEEEECCCCCCcchhhc-chhH-HHHHHHHhCcccccccccchhhHHhhcccCccccc
Confidence 99999999999999998 89999999974321110000 0000 00011000000000 00 000000000 0
Q ss_pred CChhhhh-------ccCC---HHHHHHhhhcccCCCC-CHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHH
Q 008371 305 ADWEGIT-------KSRS---IRDFDNHATRVLGKFE-TVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDE 373 (568)
Q Consensus 305 ~d~~~i~-------~~~~---l~~fd~~~~~~~~g~~-~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~ 373 (568)
...+.+. .... ..++.... ...++. ....... .....+.+|++|+|+|+|++|+++++.......
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~ 251 (295)
T PRK03592 176 LSDEEMAVYRRPFPTPESRRPTLSWPREL--PIDGEPADVVALVE--EYAQWLATSDVPKLLINAEPGAILTTGAIRDWC 251 (295)
T ss_pred CCHHHHHHHHhhcCCchhhhhhhhhhhhc--CCCCcchhhHhhhh--HhHHHhccCCCCeEEEeccCCcccCcHHHHHHH
Confidence 0000000 0000 00000000 000000 0000000 012346789999999999999999655444434
Q ss_pred HhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhh
Q 008371 374 CRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALN 416 (568)
Q Consensus 374 ~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~ 416 (568)
....++.++.+++++||+.++| .+..+.+.+.+|+++..
T Consensus 252 ~~~~~~~~~~~i~~~gH~~~~e----~p~~v~~~i~~fl~~~~ 290 (295)
T PRK03592 252 RSWPNQLEITVFGAGLHFAQED----SPEEIGAAIAAWLRRLR 290 (295)
T ss_pred HHhhhhcceeeccCcchhhhhc----CHHHHHHHHHHHHHHhc
Confidence 4556789999999999999998 45679999999998764
No 15
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.88 E-value=1.6e-21 Score=192.19 Aligned_cols=280 Identities=15% Similarity=0.124 Sum_probs=178.5
Q ss_pred CCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEc
Q 008371 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (568)
Q Consensus 111 ~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D 190 (568)
.+.+...+++.++|..+...++.|.. ....+..|+++||+++.+...| +.++..|+..||.|+++|
T Consensus 24 ~~~~~~~~~~n~rG~~lft~~W~p~~-------------~~~pr~lv~~~HG~g~~~s~~~-~~~a~~l~~~g~~v~a~D 89 (313)
T KOG1455|consen 24 GVTYSESFFTNPRGAKLFTQSWLPLS-------------GTEPRGLVFLCHGYGEHSSWRY-QSTAKRLAKSGFAVYAID 89 (313)
T ss_pred ccceeeeeEEcCCCCEeEEEecccCC-------------CCCCceEEEEEcCCcccchhhH-HHHHHHHHhCCCeEEEee
Confidence 45677788999999999888777643 1356778999999977554444 789999999999999999
Q ss_pred CCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHH--CCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChh
Q 008371 191 HRGLGGISLTSDCFYN-GGWTEDLRRVIDYLHCQ--YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (568)
Q Consensus 191 ~RG~G~S~~~~~~~~~-~~~~~Dl~~vi~~l~~~--~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~ 267 (568)
++|||+|++....... ...++|+...++.++.+ +++.|.+++||||||.|++.++.+.|. -.+|+|++++.....
T Consensus 90 ~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~--~w~G~ilvaPmc~i~ 167 (313)
T KOG1455|consen 90 YEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPN--FWDGAILVAPMCKIS 167 (313)
T ss_pred ccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCc--ccccceeeecccccC
Confidence 9999999976543322 33458888888876554 567899999999999999999999887 799999998765443
Q ss_pred hhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHH---HHhhhcccCCCCCHHHHHHhCC-cc
Q 008371 268 ICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDF---DNHATRVLGKFETVDAYYRHSS-SA 343 (568)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~f---d~~~~~~~~g~~~~~~yy~~~s-~~ 343 (568)
.... .......++. .+...+...+ ........+.+.+....+.. +.....-....++..+..+... ..
T Consensus 168 ~~~k--p~p~v~~~l~-----~l~~liP~wk-~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le 239 (313)
T KOG1455|consen 168 EDTK--PHPPVISILT-----LLSKLIPTWK-IVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLE 239 (313)
T ss_pred CccC--CCcHHHHHHH-----HHHHhCCcee-ecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHH
Confidence 2210 0001011110 1111111111 00000000000000001111 0000100111223334433332 24
Q ss_pred cccCCCccceEEEEeCCCCCCCCCCcch-HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHH
Q 008371 344 NFVRNVSVPLLCISTLDDPVCTREAIPW-DECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (568)
Q Consensus 344 ~~l~~I~vPvLiI~G~dDpivp~~~~~~-~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~ 414 (568)
..++++++|.+++||++|.++.++.... .+...+.+..+.++|+.=|..+.-...++...+...|.+||++
T Consensus 240 ~~l~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 240 KNLNEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred HhcccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 5788999999999999999999886654 3556788999999999999876511223334667888888875
No 16
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.87 E-value=1.5e-21 Score=197.74 Aligned_cols=239 Identities=12% Similarity=0.017 Sum_probs=137.8
Q ss_pred CcEEEEeCCCCCCchhHHH--HHHHHHHHhCCceEEEEcCCCCCCCCCCCCC-CCCCCcHHHHHHHHHHHHHHCCCCcEE
Q 008371 154 NPIVVVIPGLTSDSAAAYI--KHLAFKMAGHGWNVVVSNHRGLGGISLTSDC-FYNGGWTEDLRRVIDYLHCQYPEVPLY 230 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~--~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~-~~~~~~~~Dl~~vi~~l~~~~~~~~i~ 230 (568)
.|.||++||++++.. .|- ...+..+.+.||+|+++|+||||.|+..... .......+|+.++++.+ ...+++
T Consensus 30 ~~~ivllHG~~~~~~-~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~ 104 (282)
T TIGR03343 30 GEAVIMLHGGGPGAG-GWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DIEKAH 104 (282)
T ss_pred CCeEEEECCCCCchh-hHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc----CCCCee
Confidence 467999999965433 231 1335567778999999999999999754221 11122456776666655 345899
Q ss_pred EEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHH---HHHHhHhhHHhhhhhhhc-cCC
Q 008371 231 AVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRV---IAIGLRGFAQLHQSTVAR-LAD 306 (568)
Q Consensus 231 lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~---l~~~l~~~~~~~~~~~~~-~~d 306 (568)
++||||||.+++.++.++|+ +++++|+++++..................+... ....+........ +.. ..+
T Consensus 105 lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 180 (282)
T TIGR03343 105 LVGNSMGGATALNFALEYPD--RIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFL--FDQSLIT 180 (282)
T ss_pred EEEECchHHHHHHHHHhChH--hhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCc--cCcccCc
Confidence 99999999999999999988 899999998753211000000000000000000 0000000000000 000 000
Q ss_pred hhhhh-----ccCCHHHHHHhhhcc-cCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCE
Q 008371 307 WEGIT-----KSRSIRDFDNHATRV-LGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKI 380 (568)
Q Consensus 307 ~~~i~-----~~~~l~~fd~~~~~~-~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~ 380 (568)
.+... ............... ...+. .......+++|++|+|+++|++|++++++.... .....+++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~-~~~~~~~~ 252 (282)
T TIGR03343 181 EELLQGRWENIQRQPEHLKNFLISSQKAPLS-------TWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLK-LLWNMPDA 252 (282)
T ss_pred HHHHHhHHHHhhcCHHHHHHHHHhccccccc-------cchHHHHHhhCCCCEEEEEccCCCcCCchhHHH-HHHhCCCC
Confidence 00000 000000000000000 00000 011124567899999999999999999876654 55677899
Q ss_pred EEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008371 381 ILATTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (568)
Q Consensus 381 ~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~ 413 (568)
++++++++||+.+.| .+..+.+.|.+|++
T Consensus 253 ~~~~i~~agH~~~~e----~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 253 QLHVFSRCGHWAQWE----HADAFNRLVIDFLR 281 (282)
T ss_pred EEEEeCCCCcCCccc----CHHHHHHHHHHHhh
Confidence 999999999999988 55678899999986
No 17
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.87 E-value=2.9e-21 Score=190.97 Aligned_cols=239 Identities=18% Similarity=0.164 Sum_probs=139.0
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHHCCCCcEE
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYN-GGWTEDLRRVIDYLHCQYPEVPLY 230 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~vi~~l~~~~~~~~i~ 230 (568)
+++|+||++||+++++ ..| ...+..+. +||+|+++|+||||.|+...+..+. ..+.+|+.++++++ ...+++
T Consensus 11 ~~~~~iv~lhG~~~~~-~~~-~~~~~~l~-~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~----~~~~~~ 83 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSG-SYW-APQLDVLT-QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL----NIERFH 83 (257)
T ss_pred CCCCEEEEEcCCCcch-hHH-HHHHHHHH-hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh----CCCcEE
Confidence 4578999999997643 344 56777765 5799999999999999764333222 23345555555544 345899
Q ss_pred EEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhh
Q 008371 231 AVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGI 310 (568)
Q Consensus 231 lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i 310 (568)
++||||||.+++.+++.+++ .++++|++++............... ..+.... ....+... ...+.....+.
T Consensus 84 l~G~S~Gg~~a~~~a~~~~~--~v~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~-~~~~~~~~~~~-- 154 (257)
T TIGR03611 84 FVGHALGGLIGLQLALRYPE--RLLSLVLINAWSRPDPHTRRCFDVR-IALLQHA---GPEAYVHA-QALFLYPADWI-- 154 (257)
T ss_pred EEEechhHHHHHHHHHHChH--HhHHheeecCCCCCChhHHHHHHHH-HHHHhcc---Ccchhhhh-hhhhhccccHh--
Confidence 99999999999999999887 7999999886443321111000000 0000000 00000000 00000000000
Q ss_pred hccCCHHHHHHhhhcccCCCCCHH------HHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008371 311 TKSRSIRDFDNHATRVLGKFETVD------AYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILAT 384 (568)
Q Consensus 311 ~~~~~l~~fd~~~~~~~~g~~~~~------~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~ 384 (568)
.... ....+........+.... ......+....+.++++|+|+++|++|+++|.+.... .....++..++.
T Consensus 155 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~ 231 (257)
T TIGR03611 155 SENA--ARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLR-LAAALPNAQLKL 231 (257)
T ss_pred hccc--hhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHH-HHHhcCCceEEE
Confidence 0000 000000000000011111 1112223345678899999999999999999876544 455678899999
Q ss_pred eCCCCccccccccccCcccHHHHHHHHHH
Q 008371 385 TRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (568)
Q Consensus 385 ~~~GGH~~f~eg~~~~~~w~~~~i~eFL~ 413 (568)
++++||..+++ ++..+.+.+.+||+
T Consensus 232 ~~~~gH~~~~~----~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 232 LPYGGHASNVT----DPETFNRALLDFLK 256 (257)
T ss_pred ECCCCCCcccc----CHHHHHHHHHHHhc
Confidence 99999998887 45578899999986
No 18
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.87 E-value=1.9e-20 Score=197.43 Aligned_cols=245 Identities=14% Similarity=0.165 Sum_probs=139.4
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHHCCCCcEEE
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYN-GGWTEDLRRVIDYLHCQYPEVPLYA 231 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~vi~~l~~~~~~~~i~l 231 (568)
..|+|||+||++++ ...| ..++..|.+ +|+|+++|+||||.|+......|. ..+.+|+.++++.+ ...++++
T Consensus 87 ~gp~lvllHG~~~~-~~~w-~~~~~~L~~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l----~~~~~~l 159 (360)
T PLN02679 87 SGPPVLLVHGFGAS-IPHW-RRNIGVLAK-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV----VQKPTVL 159 (360)
T ss_pred CCCeEEEECCCCCC-HHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh----cCCCeEE
Confidence 45789999999764 4445 677888865 799999999999999764332222 33445666665544 3458999
Q ss_pred EEecHHHHHHHHHHHh-cCCCCCceEEEEEcCCCChhhh---hHHHhHHHH--HHHHHHHH-----HHHh-HhhH--Hhh
Q 008371 232 VGTSIGANILVKYLGE-NGVNTPLVGAAAICSPWDLLIC---DRFINRRLV--QKCYDRVI-----AIGL-RGFA--QLH 297 (568)
Q Consensus 232 vG~SmGG~ial~ya~~-~~~~~~I~a~V~is~p~d~~~~---~~~~~~~~~--~~~~~~~l-----~~~l-~~~~--~~~ 297 (568)
+||||||.+++.++.. +|+ +|+++|+++++...... ......... ...+...+ ...+ .... ...
T Consensus 160 vGhS~Gg~ia~~~a~~~~P~--rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (360)
T PLN02679 160 IGNSVGSLACVIAASESTRD--LVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNL 237 (360)
T ss_pred EEECHHHHHHHHHHHhcChh--hcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHH
Confidence 9999999999988874 577 89999999875322100 000000000 00000000 0000 0000 000
Q ss_pred hhhhhcc-CChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHh------CCcccccCCCccceEEEEeCCCCCCCCCCc-
Q 008371 298 QSTVARL-ADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRH------SSSANFVRNVSVPLLCISTLDDPVCTREAI- 369 (568)
Q Consensus 298 ~~~~~~~-~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~------~s~~~~l~~I~vPvLiI~G~dDpivp~~~~- 369 (568)
...+... .+... .-.++.+.+............+... ......+.+|++|+|+|+|++|+++|.+..
T Consensus 238 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~D~~~p~~~~~ 312 (360)
T PLN02679 238 KNILLSVYGNKEA-----VDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQDPFTPLDGPV 312 (360)
T ss_pred HHHHHHhccCccc-----CCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCCCCCcCchhhH
Confidence 0000000 00000 0001111111110000111111111 112245778999999999999999998631
Q ss_pred -c--hHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHh
Q 008371 370 -P--WDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (568)
Q Consensus 370 -~--~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~ 415 (568)
. ....+..++.++++++++||+.+.| .+..+++.|.+||+++
T Consensus 313 ~~~~~~l~~~ip~~~l~~i~~aGH~~~~E----~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 313 GKYFSSLPSQLPNVTLYVLEGVGHCPHDD----RPDLVHEKLLPWLAQL 357 (360)
T ss_pred HHHHHhhhccCCceEEEEcCCCCCCcccc----CHHHHHHHHHHHHHhc
Confidence 1 1234557899999999999999988 4567999999999864
No 19
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.87 E-value=2.3e-21 Score=189.98 Aligned_cols=236 Identities=15% Similarity=0.149 Sum_probs=138.5
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEE
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAV 232 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lv 232 (568)
.+|+||++||+++ +...| +.+++.|. +||+|+++|+||||.|+..........+++|+.++++.+ +..+++++
T Consensus 12 ~~~~li~~hg~~~-~~~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~----~~~~v~li 84 (251)
T TIGR02427 12 GAPVLVFINSLGT-DLRMW-DPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL----GIERAVFC 84 (251)
T ss_pred CCCeEEEEcCccc-chhhH-HHHHHHhh-cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCceEEE
Confidence 5789999999954 44444 67777775 689999999999999865422221122334555544443 44689999
Q ss_pred EecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHH--HHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhh
Q 008371 233 GTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRR--LVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGI 310 (568)
Q Consensus 233 G~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i 310 (568)
||||||++++.++.++++ +++++|+++++........+.... .............+.... ...+.. ..
T Consensus 85 G~S~Gg~~a~~~a~~~p~--~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~---- 154 (251)
T TIGR02427 85 GLSLGGLIAQGLAARRPD--RVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWF---TPGFRE-AH---- 154 (251)
T ss_pred EeCchHHHHHHHHHHCHH--HhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHc---cccccc-CC----
Confidence 999999999999999887 799999888654332211111000 000000000000000000 000000 00
Q ss_pred hccCCHHHHHHhhh-cccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCC
Q 008371 311 TKSRSIRDFDNHAT-RVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGG 389 (568)
Q Consensus 311 ~~~~~l~~fd~~~~-~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GG 389 (568)
......+..... ....++......+...+....+.++++|+++++|++|+++|.+.... ..+..++.+++.++++|
T Consensus 155 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~g 231 (251)
T TIGR02427 155 --PARLDLYRNMLVRQPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVRE-IADLVPGARFAEIRGAG 231 (251)
T ss_pred --hHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHH-HHHhCCCceEEEECCCC
Confidence 000011111110 00111111122222333345677899999999999999999876544 45556888999999999
Q ss_pred ccccccccccCcccHHHHHHHHH
Q 008371 390 HLAFYEGITAKSLWWVRAVNVFL 412 (568)
Q Consensus 390 H~~f~eg~~~~~~w~~~~i~eFL 412 (568)
|+.+++ .+..+.+.+.+|+
T Consensus 232 H~~~~~----~p~~~~~~i~~fl 250 (251)
T TIGR02427 232 HIPCVE----QPEAFNAALRDFL 250 (251)
T ss_pred Cccccc----ChHHHHHHHHHHh
Confidence 999987 3456778888886
No 20
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.86 E-value=2.1e-21 Score=189.85 Aligned_cols=234 Identities=12% Similarity=0.131 Sum_probs=134.9
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG 233 (568)
+|+||++||+++ +...| +.++..|.+ +|+|+++|+||+|.|+.... .++.++++.+.... ..+++++|
T Consensus 4 ~~~iv~~HG~~~-~~~~~-~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~--------~~~~~~~~~~~~~~-~~~~~lvG 71 (245)
T TIGR01738 4 NVHLVLIHGWGM-NAEVF-RCLDEELSA-HFTLHLVDLPGHGRSRGFGP--------LSLADAAEAIAAQA-PDPAIWLG 71 (245)
T ss_pred CceEEEEcCCCC-chhhH-HHHHHhhcc-CeEEEEecCCcCccCCCCCC--------cCHHHHHHHHHHhC-CCCeEEEE
Confidence 467999999965 44445 778888864 79999999999999864321 12333444444433 35899999
Q ss_pred ecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHH---HhHHHHHHHHHHHHHHHhHhhHHhhhh-hhhccCChhh
Q 008371 234 TSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRF---INRRLVQKCYDRVIAIGLRGFAQLHQS-TVARLADWEG 309 (568)
Q Consensus 234 ~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~d~~~ 309 (568)
|||||.+++.++.++|+ +++++|++++.........+ ........+... +............. .........
T Consensus 72 ~S~Gg~~a~~~a~~~p~--~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~- 147 (245)
T TIGR01738 72 WSLGGLVALHIAATHPD--RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQ-LSDDYQRTIERFLALQTLGTPTAR- 147 (245)
T ss_pred EcHHHHHHHHHHHHCHH--hhheeeEecCCcccccCCcccccCCHHHHHHHHHH-hhhhHHHHHHHHHHHHHhcCCccc-
Confidence 99999999999999988 79999998764322111000 000000000000 00000000000000 000000000
Q ss_pred hhccCCHHHHHHhhhcc-cCCCCCHH---HHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEe
Q 008371 310 ITKSRSIRDFDNHATRV-LGKFETVD---AYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATT 385 (568)
Q Consensus 310 i~~~~~l~~fd~~~~~~-~~g~~~~~---~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~ 385 (568)
.....+...+... ........ +.+...+....+.+|++|+|+++|++|+++|.+.... ..+..+++++.++
T Consensus 148 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~-~~~~~~~~~~~~~ 222 (245)
T TIGR01738 148 ----QDARALKQTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPY-LDKLAPHSELYIF 222 (245)
T ss_pred ----hHHHHHHHHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHH-HHHhCCCCeEEEe
Confidence 0000111111000 00000111 1111222335678999999999999999999876544 4566789999999
Q ss_pred CCCCccccccccccCcccHHHHHHHHH
Q 008371 386 RHGGHLAFYEGITAKSLWWVRAVNVFL 412 (568)
Q Consensus 386 ~~GGH~~f~eg~~~~~~w~~~~i~eFL 412 (568)
+++||+.++| ++..+++.+.+|+
T Consensus 223 ~~~gH~~~~e----~p~~~~~~i~~fi 245 (245)
T TIGR01738 223 AKAAHAPFLS----HAEAFCALLVAFK 245 (245)
T ss_pred CCCCCCcccc----CHHHHHHHHHhhC
Confidence 9999999998 4557888888885
No 21
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.86 E-value=3.7e-21 Score=200.60 Aligned_cols=268 Identities=15% Similarity=0.132 Sum_probs=156.7
Q ss_pred EEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHH------------------------HH
Q 008371 119 FQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYI------------------------KH 174 (568)
Q Consensus 119 ~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~------------------------~~ 174 (568)
|...||..|.+..+.+. ..+.+|+++||+++.+...|+ ..
T Consensus 2 ~~~~~g~~l~~~~~~~~----------------~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~ 65 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK----------------NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDS 65 (332)
T ss_pred ccCCCCCeEEEeeeecc----------------CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHH
Confidence 45679998877665542 346799999999877654544 35
Q ss_pred HHHHHHhCCceEEEEcCCCCCCCCCCCC-CCCCC---CcHHHHHHHHHHHHH-------------------HCC-CCcEE
Q 008371 175 LAFKMAGHGWNVVVSNHRGLGGISLTSD-CFYNG---GWTEDLRRVIDYLHC-------------------QYP-EVPLY 230 (568)
Q Consensus 175 l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~-~~~~~---~~~~Dl~~vi~~l~~-------------------~~~-~~~i~ 230 (568)
+++.|.++||+|+++|+||||.|..... ..+.. ...+|+.++++.+++ .++ +.|++
T Consensus 66 ~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 145 (332)
T TIGR01607 66 WIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMY 145 (332)
T ss_pred HHHHHHHCCCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCcee
Confidence 7899999999999999999999875422 22212 234788888887765 355 67999
Q ss_pred EEEecHHHHHHHHHHHhcCCC------CCceEEEEEcCCCChhhhh----HHHhHHHHHHHHHHHHHHHhHhhHHhhhhh
Q 008371 231 AVGTSIGANILVKYLGENGVN------TPLVGAAAICSPWDLLICD----RFINRRLVQKCYDRVIAIGLRGFAQLHQST 300 (568)
Q Consensus 231 lvG~SmGG~ial~ya~~~~~~------~~I~a~V~is~p~d~~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 300 (568)
++||||||++++.++.+.+.. ..++|+|++++++.+.... .... .....+.. .+..........
T Consensus 146 l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~-~~~~~l~~-----~~~~~~p~~~~~ 219 (332)
T TIGR01607 146 IIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFK-YFYLPVMN-----FMSRVFPTFRIS 219 (332)
T ss_pred EeeccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhh-hhHHHHHH-----HHHHHCCccccc
Confidence 999999999999998765431 2589999998877542110 0000 00000110 011110000000
Q ss_pred hhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCC-cccccCCC--ccceEEEEeCCCCCCCCCCcchHH-Hhc
Q 008371 301 VARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSS-SANFVRNV--SVPLLCISTLDDPVCTREAIPWDE-CRA 376 (568)
Q Consensus 301 ~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s-~~~~l~~I--~vPvLiI~G~dDpivp~~~~~~~~-~~~ 376 (568)
-....++.. .......-|..............+.+.... ....+.++ ++|+|+|+|++|++++++...... ...
T Consensus 220 ~~~~~~~~~--~~~~~~~~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~ 297 (332)
T TIGR01607 220 KKIRYEKSP--YVNDIIKFDKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLS 297 (332)
T ss_pred CccccccCh--hhhhHHhcCccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhcc
Confidence 000000000 000011111111000000111112221111 11234555 799999999999999987655432 234
Q ss_pred CCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008371 377 NEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (568)
Q Consensus 377 ~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~ 413 (568)
.+++.+.++++++|..+.| .++..+.+.+.+||+
T Consensus 298 ~~~~~l~~~~g~~H~i~~E---~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 298 ISNKELHTLEDMDHVITIE---PGNEEVLKKIIEWIS 331 (332)
T ss_pred CCCcEEEEECCCCCCCccC---CCHHHHHHHHHHHhh
Confidence 5788999999999999988 334457788888875
No 22
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.86 E-value=2.5e-20 Score=201.07 Aligned_cols=252 Identities=11% Similarity=0.144 Sum_probs=137.0
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHH---hCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHH-HHHHHHCCCC
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMA---GHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVI-DYLHCQYPEV 227 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~---~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi-~~l~~~~~~~ 227 (568)
+.+|+|||+||++++. ..|-..+...+. +++|+|+++|+||||.|+...+..|. + ++..+.+ ..+.+..+..
T Consensus 199 ~~k~~VVLlHG~~~s~-~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~yt--l-~~~a~~l~~~ll~~lg~~ 274 (481)
T PLN03087 199 KAKEDVLFIHGFISSS-AFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYT--L-REHLEMIERSVLERYKVK 274 (481)
T ss_pred CCCCeEEEECCCCccH-HHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCC--H-HHHHHHHHHHHHHHcCCC
Confidence 3457899999997644 344223434444 46999999999999999864333332 2 2322333 2344445567
Q ss_pred cEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhH----HHhHHHH-HHHHHHH-HHHHhHhhHHhhhhhh
Q 008371 228 PLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDR----FINRRLV-QKCYDRV-IAIGLRGFAQLHQSTV 301 (568)
Q Consensus 228 ~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~----~~~~~~~-~~~~~~~-l~~~l~~~~~~~~~~~ 301 (568)
+++++||||||.+++.++.++|+ +|+++|+++++........ ...+... ...+... +...............
T Consensus 275 k~~LVGhSmGG~iAl~~A~~~Pe--~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 352 (481)
T PLN03087 275 SFHIVAHSLGCILALALAVKHPG--AVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTI 352 (481)
T ss_pred CEEEEEECHHHHHHHHHHHhChH--hccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhh
Confidence 99999999999999999999998 8999999997654321110 0000000 0000000 0000000000000000
Q ss_pred h----c-cCChhhh---hccCCHHH-HHHhhhccc--CCCCCHHHHHHh------CCcccccCCCccceEEEEeCCCCCC
Q 008371 302 A----R-LADWEGI---TKSRSIRD-FDNHATRVL--GKFETVDAYYRH------SSSANFVRNVSVPLLCISTLDDPVC 364 (568)
Q Consensus 302 ~----~-~~d~~~i---~~~~~l~~-fd~~~~~~~--~g~~~~~~yy~~------~s~~~~l~~I~vPvLiI~G~dDpiv 364 (568)
. . ...++.+ .....+.. +.+.+.... ..+.....+... ........+|++|+|+|+|++|+++
T Consensus 353 ~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~iv 432 (481)
T PLN03087 353 CLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELI 432 (481)
T ss_pred hcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCC
Confidence 0 0 0000000 00000000 000000000 000000000000 0001223479999999999999999
Q ss_pred CCCCcchHHHhcCCCEEEEEeCCCCccccc-cccccCcccHHHHHHHHHHH
Q 008371 365 TREAIPWDECRANEKIILATTRHGGHLAFY-EGITAKSLWWVRAVNVFLDA 414 (568)
Q Consensus 365 p~~~~~~~~~~~~~~~~l~~~~~GGH~~f~-eg~~~~~~w~~~~i~eFL~~ 414 (568)
|++.... .....|++++++++++||+.++ | .+..+++.+.+|.+.
T Consensus 433 P~~~~~~-la~~iP~a~l~vI~~aGH~~~v~e----~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 433 PVECSYA-VKAKVPRARVKVIDDKDHITIVVG----RQKEFARELEEIWRR 478 (481)
T ss_pred CHHHHHH-HHHhCCCCEEEEeCCCCCcchhhc----CHHHHHHHHHHHhhc
Confidence 9887665 5677899999999999999986 5 456788999998864
No 23
>PRK13604 luxD acyl transferase; Provisional
Probab=99.86 E-value=2.1e-20 Score=189.04 Aligned_cols=251 Identities=16% Similarity=0.147 Sum_probs=159.9
Q ss_pred eEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCC
Q 008371 115 KRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGL 194 (568)
Q Consensus 115 ~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~ 194 (568)
..+.+.+.||.+|...|..|.+. ...+.++||++||+++. ...| ..++++|+++||.|+.||+||+
T Consensus 10 ~~~~~~~~dG~~L~Gwl~~P~~~------------~~~~~~~vIi~HGf~~~-~~~~-~~~A~~La~~G~~vLrfD~rg~ 75 (307)
T PRK13604 10 IDHVICLENGQSIRVWETLPKEN------------SPKKNNTILIASGFARR-MDHF-AGLAEYLSSNGFHVIRYDSLHH 75 (307)
T ss_pred hhheEEcCCCCEEEEEEEcCccc------------CCCCCCEEEEeCCCCCC-hHHH-HHHHHHHHHCCCEEEEecCCCC
Confidence 45788999999999977766431 13567899999999764 4334 7899999999999999999998
Q ss_pred -CCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHH
Q 008371 195 -GGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFI 273 (568)
Q Consensus 195 -G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~ 273 (568)
|.|++............|+.++++|++++. ..+++++||||||.+++..|++ . +++++|+.||..++... +
T Consensus 76 ~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~-~~~I~LiG~SmGgava~~~A~~--~--~v~~lI~~sp~~~l~d~---l 147 (307)
T PRK13604 76 VGLSSGTIDEFTMSIGKNSLLTVVDWLNTRG-INNLGLIAASLSARIAYEVINE--I--DLSFLITAVGVVNLRDT---L 147 (307)
T ss_pred CCCCCCccccCcccccHHHHHHHHHHHHhcC-CCceEEEEECHHHHHHHHHhcC--C--CCCEEEEcCCcccHHHH---H
Confidence 888764332222334689999999998864 4689999999999998655553 2 48899999887776421 1
Q ss_pred hHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccce
Q 008371 274 NRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPL 353 (568)
Q Consensus 274 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPv 353 (568)
.+.+ ...... +. ...+....+..... . ....|-+.... .+ ++...++.+.+.++++|+
T Consensus 148 ~~~~---------~~~~~~-~p--~~~lp~~~d~~g~~-l-~~~~f~~~~~~--~~------~~~~~s~i~~~~~l~~Pv 205 (307)
T PRK13604 148 ERAL---------GYDYLS-LP--IDELPEDLDFEGHN-L-GSEVFVTDCFK--HG------WDTLDSTINKMKGLDIPF 205 (307)
T ss_pred HHhh---------hccccc-Cc--cccccccccccccc-c-cHHHHHHHHHh--cC------ccccccHHHHHhhcCCCE
Confidence 1100 000000 00 00000000000000 0 00111110000 00 011233456677889999
Q ss_pred EEEEeCCCCCCCCCCcchHHH-hcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhhcC
Q 008371 354 LCISTLDDPVCTREAIPWDEC-RANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTS 418 (568)
Q Consensus 354 LiI~G~dDpivp~~~~~~~~~-~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~~ 418 (568)
|+|||.+|.+||.+....... ..+.+.++..+++++|.- .| +. ..+..|.+++...
T Consensus 206 LiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l-~~----~~----~~~~~~~~~~~~~ 262 (307)
T PRK13604 206 IAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDL-GE----NL----VVLRNFYQSVTKA 262 (307)
T ss_pred EEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCcccc-Cc----ch----HHHHHHHHHHHHH
Confidence 999999999999987655333 334689999999999963 33 22 5667788877643
No 24
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.86 E-value=2.7e-20 Score=187.26 Aligned_cols=246 Identities=14% Similarity=0.117 Sum_probs=137.6
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHHCCCCcEEE
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYN-GGWTEDLRRVIDYLHCQYPEVPLYA 231 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~vi~~l~~~~~~~~i~l 231 (568)
+.|+||++||++++ ...| +.++..|.+ +|+|+++|+||||.|+......++ ..+.+|+.++++. ....++++
T Consensus 27 ~~~~vv~~hG~~~~-~~~~-~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~----~~~~~~~l 99 (278)
T TIGR03056 27 AGPLLLLLHGTGAS-THSW-RDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAA----EGLSPDGV 99 (278)
T ss_pred CCCeEEEEcCCCCC-HHHH-HHHHHHHhh-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHH----cCCCCceE
Confidence 45889999999654 4445 678888865 799999999999999754332222 2334455555443 34468899
Q ss_pred EEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhH-HHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccC-Chhh
Q 008371 232 VGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDR-FINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLA-DWEG 309 (568)
Q Consensus 232 vG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~-d~~~ 309 (568)
+||||||++++.++..+++ +++++|++++......... ..............+...+............... ....
T Consensus 100 vG~S~Gg~~a~~~a~~~p~--~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (278)
T TIGR03056 100 IGHSAGAAIALRLALDGPV--TPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDTGS 177 (278)
T ss_pred EEECccHHHHHHHHHhCCc--ccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhcccc
Confidence 9999999999999999887 7999999987654221100 0000000000000000000000000000000000 0000
Q ss_pred hhccCCHHHHHHhhhcccCCCCCHHHHHHhC---CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008371 310 ITKSRSIRDFDNHATRVLGKFETVDAYYRHS---SSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTR 386 (568)
Q Consensus 310 i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~---s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~ 386 (568)
.........+.+..... ..+....++.... .....+++|++|+|+|+|++|.++|.+.... .....++++++.++
T Consensus 178 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~~-~~~~~~~~~~~~~~ 255 (278)
T TIGR03056 178 LLDKAGMTYYGRLIRSP-AHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESKR-AATRVPTATLHVVP 255 (278)
T ss_pred ccccchhhHHHHhhcCc-hhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHHH-HHHhccCCeEEEEC
Confidence 00000011111111000 0000011111111 1123577899999999999999999875544 55667899999999
Q ss_pred CCCccccccccccCcccHHHHHHHHHH
Q 008371 387 HGGHLAFYEGITAKSLWWVRAVNVFLD 413 (568)
Q Consensus 387 ~GGH~~f~eg~~~~~~w~~~~i~eFL~ 413 (568)
++||+.+.| .+..+.+.|.+|++
T Consensus 256 ~~gH~~~~e----~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 256 GGGHLVHEE----QADGVVGLILQAAE 278 (278)
T ss_pred CCCCccccc----CHHHHHHHHHHHhC
Confidence 999999887 45568899988874
No 25
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.85 E-value=9.8e-20 Score=182.67 Aligned_cols=248 Identities=14% Similarity=0.127 Sum_probs=134.4
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEE
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAV 232 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lv 232 (568)
.+|+||++||+.|++. .|+..+...+.+.||+|+++|+||+|.|+....... ....+++.+.+..+.+.....+++++
T Consensus 24 ~~~~vl~~hG~~g~~~-~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li 101 (288)
T TIGR01250 24 EKIKLLLLHGGPGMSH-EYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDE-LWTIDYFVDELEEVREKLGLDKFYLL 101 (288)
T ss_pred CCCeEEEEcCCCCccH-HHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccc-cccHHHHHHHHHHHHHHcCCCcEEEE
Confidence 3577999999877655 444667777766699999999999999875422110 01123333333334444445679999
Q ss_pred EecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHh-------hhhhhhccC
Q 008371 233 GTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQL-------HQSTVARLA 305 (568)
Q Consensus 233 G~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-------~~~~~~~~~ 305 (568)
||||||.+++.++..+++ +++++|++++.............. . ..+.......+...... .........
T Consensus 102 G~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (288)
T TIGR01250 102 GHSWGGMLAQEYALKYGQ--HLKGLIISSMLDSAPEYVKELNRL-R-KELPPEVRAAIKRCEASGDYDNPEYQEAVEVFY 177 (288)
T ss_pred EeehHHHHHHHHHHhCcc--ccceeeEecccccchHHHHHHHHH-H-hhcChhHHHHHHHHHhccCcchHHHHHHHHHHH
Confidence 999999999999999987 799999887644322111110000 0 00000000000000000 000000000
Q ss_pred ChhhhhccC----CHHHHHHhhh----cccCCCCC--HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHh
Q 008371 306 DWEGITKSR----SIRDFDNHAT----RVLGKFET--VDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECR 375 (568)
Q Consensus 306 d~~~i~~~~----~l~~fd~~~~----~~~~g~~~--~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~ 375 (568)
. ....... ....+..... ....+-.. ....+........+.+|++|+|+++|++|.+ +++.... ...
T Consensus 178 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~-~~~~~~~-~~~ 254 (288)
T TIGR01250 178 H-HLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEFDTM-TPEAARE-MQE 254 (288)
T ss_pred H-HhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCCCcc-CHHHHHH-HHH
Confidence 0 0000000 0000000000 00000000 0001111122345678999999999999986 4444333 455
Q ss_pred cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008371 376 ANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (568)
Q Consensus 376 ~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~ 413 (568)
..++.++++++++||+.++| .+..+.+.|.+|++
T Consensus 255 ~~~~~~~~~~~~~gH~~~~e----~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 255 LIAGSRLVVFPDGSHMTMIE----DPEVYFKLLSDFIR 288 (288)
T ss_pred hccCCeEEEeCCCCCCcccC----CHHHHHHHHHHHhC
Confidence 67888999999999999998 45578889888874
No 26
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.85 E-value=1.3e-20 Score=188.50 Aligned_cols=233 Identities=12% Similarity=0.119 Sum_probs=135.6
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG 233 (568)
.|.|||+||++++ ...| +.++..|.+ +|+|+++|+||||.|+... .+ . .+++. +.+... ...+++++|
T Consensus 13 ~~~ivllHG~~~~-~~~w-~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~--~~--~-~~~~~---~~l~~~-~~~~~~lvG 80 (256)
T PRK10349 13 NVHLVLLHGWGLN-AEVW-RCIDEELSS-HFTLHLVDLPGFGRSRGFG--AL--S-LADMA---EAVLQQ-APDKAIWLG 80 (256)
T ss_pred CCeEEEECCCCCC-hhHH-HHHHHHHhc-CCEEEEecCCCCCCCCCCC--CC--C-HHHHH---HHHHhc-CCCCeEEEE
Confidence 3569999999654 4444 678888865 5999999999999997432 11 1 23332 233222 346899999
Q ss_pred ecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhH--HHhHHHHHHHHHHH---HHHHhHhhHHhhhhhhhccCChh
Q 008371 234 TSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDR--FINRRLVQKCYDRV---IAIGLRGFAQLHQSTVARLADWE 308 (568)
Q Consensus 234 ~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~--~~~~~~~~~~~~~~---l~~~l~~~~~~~~~~~~~~~d~~ 308 (568)
|||||.+++.++.++|+ +|+++|+++++........ .........+.... ....+..++... .+.. ....
T Consensus 81 hS~Gg~ia~~~a~~~p~--~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~ 155 (256)
T PRK10349 81 WSLGGLVASQIALTHPE--RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQ--TMGT-ETAR 155 (256)
T ss_pred ECHHHHHHHHHHHhChH--hhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHH--HccC-chHH
Confidence 99999999999999888 8999999987432211000 00000001111100 000011111000 0000 0000
Q ss_pred hhhccCCHHHHHHhhhc-ccCCCCC---HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008371 309 GITKSRSIRDFDNHATR-VLGKFET---VDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILAT 384 (568)
Q Consensus 309 ~i~~~~~l~~fd~~~~~-~~~g~~~---~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~ 384 (568)
....++...... ....... ..+.+...+....+.+|++|+|+|+|++|+++|.+.... .....++.++++
T Consensus 156 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~-~~~~i~~~~~~~ 229 (256)
T PRK10349 156 -----QDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPM-LDKLWPHSESYI 229 (256)
T ss_pred -----HHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHH-HHHhCCCCeEEE
Confidence 000011111100 0000000 112223334456788999999999999999998765443 556679999999
Q ss_pred eCCCCccccccccccCcccHHHHHHHHHH
Q 008371 385 TRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (568)
Q Consensus 385 ~~~GGH~~f~eg~~~~~~w~~~~i~eFL~ 413 (568)
++++||+.++| .+..+.+.+.+|-.
T Consensus 230 i~~~gH~~~~e----~p~~f~~~l~~~~~ 254 (256)
T PRK10349 230 FAKAAHAPFIS----HPAEFCHLLVALKQ 254 (256)
T ss_pred eCCCCCCcccc----CHHHHHHHHHHHhc
Confidence 99999999998 55578888888754
No 27
>PLN02578 hydrolase
Probab=99.85 E-value=3.5e-20 Score=195.05 Aligned_cols=243 Identities=16% Similarity=0.141 Sum_probs=139.0
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG 233 (568)
+|.||++||++++ ...| ..++..|.+ +|+|+++|+||||.|+..........+.+|+.++++.+. ..+++++|
T Consensus 86 g~~vvliHG~~~~-~~~w-~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~----~~~~~lvG 158 (354)
T PLN02578 86 GLPIVLIHGFGAS-AFHW-RYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVV----KEPAVLVG 158 (354)
T ss_pred CCeEEEECCCCCC-HHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhc----cCCeEEEE
Confidence 4668999999654 4344 567777764 699999999999999865322222234456666666553 35899999
Q ss_pred ecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhH-----------HHhHHHH---HHHHHHHHHHHhHhhHHhhhh
Q 008371 234 TSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDR-----------FINRRLV---QKCYDRVIAIGLRGFAQLHQS 299 (568)
Q Consensus 234 ~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~-----------~~~~~~~---~~~~~~~l~~~l~~~~~~~~~ 299 (568)
|||||.+++.++.++|+ +++++|+++++........ ....... ...+.+.....+.. ......
T Consensus 159 ~S~Gg~ia~~~A~~~p~--~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 235 (354)
T PLN02578 159 NSLGGFTALSTAVGYPE--LVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFW-QAKQPS 235 (354)
T ss_pred ECHHHHHHHHHHHhChH--hcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHH-HhcCHH
Confidence 99999999999999998 8999999986432211100 0000000 00111100000000 000000
Q ss_pred hhhccCChhhhhccCCH-HHHHHhhhcccCCCCCHHHHHHh----------CCcccccCCCccceEEEEeCCCCCCCCCC
Q 008371 300 TVARLADWEGITKSRSI-RDFDNHATRVLGKFETVDAYYRH----------SSSANFVRNVSVPLLCISTLDDPVCTREA 368 (568)
Q Consensus 300 ~~~~~~d~~~i~~~~~l-~~fd~~~~~~~~g~~~~~~yy~~----------~s~~~~l~~I~vPvLiI~G~dDpivp~~~ 368 (568)
.+..... ......... ..+.+.+............+++. ....+.++++++|+|+|+|++|+++|.+.
T Consensus 236 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLiI~G~~D~~v~~~~ 314 (354)
T PLN02578 236 RIESVLK-SVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCPLLLLWGDLDPWVGPAK 314 (354)
T ss_pred HHHHHHH-HhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCCEEEEEeCCCCCCCHHH
Confidence 0000000 000000000 00111111111111111222211 11234578899999999999999998876
Q ss_pred cchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008371 369 IPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (568)
Q Consensus 369 ~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~ 413 (568)
... ..+..++.+++.+ ++||+.+.| .+.++.+.|.+|++
T Consensus 315 ~~~-l~~~~p~a~l~~i-~~GH~~~~e----~p~~~~~~I~~fl~ 353 (354)
T PLN02578 315 AEK-IKAFYPDTTLVNL-QAGHCPHDE----VPEQVNKALLEWLS 353 (354)
T ss_pred HHH-HHHhCCCCEEEEe-CCCCCcccc----CHHHHHHHHHHHHh
Confidence 554 4566788888888 599999988 56679999999986
No 28
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.85 E-value=1.5e-20 Score=187.31 Aligned_cols=237 Identities=16% Similarity=0.097 Sum_probs=142.1
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEE
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYA 231 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~l 231 (568)
.++|+||++||+.++. ..| ..++..|.+ +|+|+++|+||||.|..... .....+.+|+.++++++ ...++++
T Consensus 14 ~~~~~iv~lhG~~~~~-~~~-~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~-~~~~~~~~d~~~~l~~l----~~~~~~l 85 (255)
T PRK10673 14 HNNSPIVLVHGLFGSL-DNL-GVLARDLVN-DHDIIQVDMRNHGLSPRDPV-MNYPAMAQDLLDTLDAL----QIEKATF 85 (255)
T ss_pred CCCCCEEEECCCCCch-hHH-HHHHHHHhh-CCeEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHHHc----CCCceEE
Confidence 4678899999997654 344 678888764 79999999999999975422 22234567777777765 3457999
Q ss_pred EEecHHHHHHHHHHHhcCCCCCceEEEEEcCC-CChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhh
Q 008371 232 VGTSIGANILVKYLGENGVNTPLVGAAAICSP-WDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGI 310 (568)
Q Consensus 232 vG~SmGG~ial~ya~~~~~~~~I~a~V~is~p-~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i 310 (568)
+||||||.+++.++.++++ +|+++|+++++ .+.... .. ...... ............ ......+......+
T Consensus 86 vGhS~Gg~va~~~a~~~~~--~v~~lvli~~~~~~~~~~-~~--~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~-- 156 (255)
T PRK10673 86 IGHSMGGKAVMALTALAPD--RIDKLVAIDIAPVDYHVR-RH--DEIFAA-INAVSEAGATTR-QQAAAIMRQHLNEE-- 156 (255)
T ss_pred EEECHHHHHHHHHHHhCHh--hcceEEEEecCCCCccch-hh--HHHHHH-HHHhhhcccccH-HHHHHHHHHhcCCH--
Confidence 9999999999999999888 89999998743 221100 00 000000 000000000000 00000000000000
Q ss_pred hccCCHHHHHH-hhhccc--CCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC
Q 008371 311 TKSRSIRDFDN-HATRVL--GKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRH 387 (568)
Q Consensus 311 ~~~~~l~~fd~-~~~~~~--~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~ 387 (568)
....+.. .+.... .........+........+.++++|+|+|+|++|++++.+.... ..+..++++++++++
T Consensus 157 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~-~~~~~~~~~~~~~~~ 231 (255)
T PRK10673 157 ----GVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDD-LLAQFPQARAHVIAG 231 (255)
T ss_pred ----HHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHH-HHHhCCCcEEEEeCC
Confidence 0000000 000000 00001111222223334567889999999999999998765554 566778999999999
Q ss_pred CCccccccccccCcccHHHHHHHHHHH
Q 008371 388 GGHLAFYEGITAKSLWWVRAVNVFLDA 414 (568)
Q Consensus 388 GGH~~f~eg~~~~~~w~~~~i~eFL~~ 414 (568)
+||+.++| .+..+.+.+.+||++
T Consensus 232 ~gH~~~~~----~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 232 AGHWVHAE----KPDAVLRAIRRYLND 254 (255)
T ss_pred CCCeeecc----CHHHHHHHHHHHHhc
Confidence 99998887 456788999999874
No 29
>PLN02965 Probable pheophorbidase
Probab=99.85 E-value=9.3e-21 Score=189.94 Aligned_cols=242 Identities=14% Similarity=0.101 Sum_probs=139.9
Q ss_pred EEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCC-CCcHHHHHHHHHHHHHHCCCCcEEEEEe
Q 008371 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYN-GGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (568)
Q Consensus 156 vVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-~~~~~Dl~~vi~~l~~~~~~~~i~lvG~ 234 (568)
.|||+||++++ ...| +.++..|.+.||+|+++|+||||.|+......+. ....+|+.++++.+. ...+++++||
T Consensus 5 ~vvllHG~~~~-~~~w-~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~~lvGh 79 (255)
T PLN02965 5 HFVFVHGASHG-AWCW-YKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLP---PDHKVILVGH 79 (255)
T ss_pred EEEEECCCCCC-cCcH-HHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcC---CCCCEEEEec
Confidence 38999999654 3344 6788999888999999999999999754332222 334456666666542 1248999999
Q ss_pred cHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhh---hhHHHhHH-HHHHHHHHHHHHHhHhhHH--hhhhhhhccCChh
Q 008371 235 SIGANILVKYLGENGVNTPLVGAAAICSPWDLLI---CDRFINRR-LVQKCYDRVIAIGLRGFAQ--LHQSTVARLADWE 308 (568)
Q Consensus 235 SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~---~~~~~~~~-~~~~~~~~~l~~~l~~~~~--~~~~~~~~~~d~~ 308 (568)
||||.+++.++.++|+ +|+++|++++...... ........ .....+...+......... .....+. ..
T Consensus 80 SmGG~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 153 (255)
T PLN02965 80 SIGGGSVTEALCKFTD--KISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFV----RH 153 (255)
T ss_pred CcchHHHHHHHHhCch--heeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHH----HH
Confidence 9999999999999988 8999999987521110 00000000 0000000000000000000 0000000 00
Q ss_pred hhhccCCHHHHHHhhhc-ccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC
Q 008371 309 GITKSRSIRDFDNHATR-VLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRH 387 (568)
Q Consensus 309 ~i~~~~~l~~fd~~~~~-~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~ 387 (568)
.........+....... ........... ......+.++++|+|+|+|++|.++|++.... ..+..++.+++++++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~-~~~~~~~a~~~~i~~ 229 (255)
T PLN02965 154 YYYNQSPLEDYTLSSKLLRPAPVRAFQDL---DKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDV-MVENWPPAQTYVLED 229 (255)
T ss_pred HHhcCCCHHHHHHHHHhcCCCCCcchhhh---hhccchhhcCCCCEEEEEcCCCCCCCHHHHHH-HHHhCCcceEEEecC
Confidence 00000001101000000 00001111111 01122455799999999999999999875554 667889999999999
Q ss_pred CCccccccccccCcccHHHHHHHHHHHhh
Q 008371 388 GGHLAFYEGITAKSLWWVRAVNVFLDALN 416 (568)
Q Consensus 388 GGH~~f~eg~~~~~~w~~~~i~eFL~~~~ 416 (568)
+||+.+.| .+..+++.+.+|++.+.
T Consensus 230 ~GH~~~~e----~p~~v~~~l~~~~~~~~ 254 (255)
T PLN02965 230 SDHSAFFS----VPTTLFQYLLQAVSSLQ 254 (255)
T ss_pred CCCchhhc----CHHHHHHHHHHHHHHhc
Confidence 99999998 55568899999988753
No 30
>PRK06489 hypothetical protein; Provisional
Probab=99.85 E-value=6.5e-20 Score=193.44 Aligned_cols=248 Identities=13% Similarity=0.106 Sum_probs=137.1
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHH-------HhCCceEEEEcCCCCCCCCCCCCCC----CCCCcHHHHH-HHHHHHH
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKM-------AGHGWNVVVSNHRGLGGISLTSDCF----YNGGWTEDLR-RVIDYLH 221 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l-------~~~Gy~Vvv~D~RG~G~S~~~~~~~----~~~~~~~Dl~-~vi~~l~ 221 (568)
+|+|||+||++++...++...+...+ ..++|+|+++|+||||.|+...... ... ..+|+. +++..+.
T Consensus 69 gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~-~~~~~a~~~~~~l~ 147 (360)
T PRK06489 69 DNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRY-DYDDMVEAQYRLVT 147 (360)
T ss_pred CCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcc-cHHHHHHHHHHHHH
Confidence 67899999997754432212344444 2468999999999999997543211 011 123433 3344454
Q ss_pred HHCCCCcEE-EEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHH----------HHHh
Q 008371 222 CQYPEVPLY-AVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVI----------AIGL 290 (568)
Q Consensus 222 ~~~~~~~i~-lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l----------~~~l 290 (568)
+..+..+++ ++||||||++++.++.++|+ +|+++|++++........................ ...+
T Consensus 148 ~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~--~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (360)
T PRK06489 148 EGLGVKHLRLILGTSMGGMHAWMWGEKYPD--FMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSL 225 (360)
T ss_pred HhcCCCceeEEEEECHHHHHHHHHHHhCch--hhheeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHH
Confidence 544555774 89999999999999999998 8999999987432111001000000000000000 0000
Q ss_pred HhhHHhhhh-------hhh-ccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHH------hCCcccccCCCccceEEE
Q 008371 291 RGFAQLHQS-------TVA-RLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYR------HSSSANFVRNVSVPLLCI 356 (568)
Q Consensus 291 ~~~~~~~~~-------~~~-~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~------~~s~~~~l~~I~vPvLiI 356 (568)
......... .+. ....... ....++........ .....+.. ..+....+.+|++|+|+|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~L~~I~~PvLvI 298 (360)
T PRK06489 226 KRANPMFAIATSGGTLAYQAQAPTRAA-----ADKLVDERLAAPVT--ADANDFLYQWDSSRDYNPSPDLEKIKAPVLAI 298 (360)
T ss_pred HHHHHHHHHHHhCCHHHHHHhcCChHH-----HHHHHHHHHHhhhh--cCHHHHHHHHHHhhccChHHHHHhCCCCEEEE
Confidence 000000000 000 0000000 00011111110000 01112211 122345678999999999
Q ss_pred EeCCCCCCCCCCcc-hHHHhcCCCEEEEEeCCC----CccccccccccCcccHHHHHHHHHHHhh
Q 008371 357 STLDDPVCTREAIP-WDECRANEKIILATTRHG----GHLAFYEGITAKSLWWVRAVNVFLDALN 416 (568)
Q Consensus 357 ~G~dDpivp~~~~~-~~~~~~~~~~~l~~~~~G----GH~~f~eg~~~~~~w~~~~i~eFL~~~~ 416 (568)
+|++|+++|++... ....+..|+.++++++++ ||+.+ | .+..+++.|.+||+.+.
T Consensus 299 ~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e----~P~~~~~~i~~FL~~~~ 358 (360)
T PRK06489 299 NSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-G----SAKFWKAYLAEFLAQVP 358 (360)
T ss_pred ecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-c----CHHHHHHHHHHHHHhcc
Confidence 99999999987541 235677899999999986 99886 5 45579999999998764
No 31
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.85 E-value=2.5e-20 Score=179.33 Aligned_cols=217 Identities=19% Similarity=0.223 Sum_probs=126.1
Q ss_pred EEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecH
Q 008371 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSI 236 (568)
Q Consensus 157 VVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~Sm 236 (568)
|||+||++++. ..| ..+++.|. +||+|+++|+||+|.|+.... .....+.+++.++.+.+ +.....+++++|||+
T Consensus 1 vv~~hG~~~~~-~~~-~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~l~~~l-~~~~~~~~~lvG~S~ 75 (228)
T PF12697_consen 1 VVFLHGFGGSS-ESW-DPLAEALA-RGYRVIAFDLPGHGRSDPPPD-YSPYSIEDYAEDLAELL-DALGIKKVILVGHSM 75 (228)
T ss_dssp EEEE-STTTTG-GGG-HHHHHHHH-TTSEEEEEECTTSTTSSSHSS-GSGGSHHHHHHHHHHHH-HHTTTSSEEEEEETH
T ss_pred eEEECCCCCCH-HHH-HHHHHHHh-CCCEEEEEecCCccccccccc-cCCcchhhhhhhhhhcc-ccccccccccccccc
Confidence 79999997654 344 67889884 799999999999999986432 11122222333333333 333346899999999
Q ss_pred HHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhh--HHHhHHHHHHHHHHHHHHHhHhhHHh-hhhhhhccCChhhhhcc
Q 008371 237 GANILVKYLGENGVNTPLVGAAAICSPWDLLICD--RFINRRLVQKCYDRVIAIGLRGFAQL-HQSTVARLADWEGITKS 313 (568)
Q Consensus 237 GG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~~~~d~~~i~~~ 313 (568)
||.+++.++.++|+ +|+++|+++++....... ... ......+...... ........ ..... ...........
T Consensus 76 Gg~~a~~~a~~~p~--~v~~~vl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~ 150 (228)
T PF12697_consen 76 GGMIALRLAARYPD--RVKGLVLLSPPPPLPDSPSRSFG-PSFIRRLLAWRSR-SLRRLASRFFYRWF-DGDEPEDLIRS 150 (228)
T ss_dssp HHHHHHHHHHHSGG--GEEEEEEESESSSHHHHHCHHHH-HHHHHHHHHHHHH-HHHHHHHHHHHHHH-THHHHHHHHHH
T ss_pred cccccccccccccc--ccccceeeccccccccccccccc-chhhhhhhhcccc-cccccccccccccc-ccccccccccc
Confidence 99999999999988 899999999988664322 111 1111111111100 00000000 00000 00000000000
Q ss_pred CCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcccc
Q 008371 314 RSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAF 393 (568)
Q Consensus 314 ~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f 393 (568)
....+.+.+... +........+.++++|+++++|++|++++.+.... .....+++++++++++||+.+
T Consensus 151 -~~~~~~~~~~~~----------~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~-~~~~~~~~~~~~~~~~gH~~~ 218 (228)
T PF12697_consen 151 -SRRALAEYLRSN----------LWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEE-LADKLPNAELVVIPGAGHFLF 218 (228)
T ss_dssp -HHHHHHHHHHHH----------HHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHH-HHHHSTTEEEEEETTSSSTHH
T ss_pred -cccccccccccc----------cccccccccccccCCCeEEeecCCCCCCCHHHHHH-HHHHCCCCEEEEECCCCCccH
Confidence 000010000000 01112235567889999999999999999554443 455678999999999999999
Q ss_pred cc
Q 008371 394 YE 395 (568)
Q Consensus 394 ~e 395 (568)
+|
T Consensus 219 ~~ 220 (228)
T PF12697_consen 219 LE 220 (228)
T ss_dssp HH
T ss_pred HH
Confidence 88
No 32
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.84 E-value=1.7e-20 Score=183.23 Aligned_cols=239 Identities=16% Similarity=0.182 Sum_probs=137.1
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG 233 (568)
+|+||++||+++++ ..| +.++..|. +||+|+++|+||+|.|+.... ....++.+.+.+++..+.+..+..+++++|
T Consensus 1 ~~~vv~~hG~~~~~-~~~-~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G 76 (251)
T TIGR03695 1 KPVLVFLHGFLGSG-ADW-QALIELLG-PHFRCLAIDLPGHGSSQSPDE-IERYDFEEAAQDILATLLDQLGIEPFFLVG 76 (251)
T ss_pred CCEEEEEcCCCCch-hhH-HHHHHHhc-ccCeEEEEcCCCCCCCCCCCc-cChhhHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 36799999997644 345 78889987 799999999999999975422 111223233334366666666677999999
Q ss_pred ecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHH-HHhHhhHHhhh--hhhhcc--CChh
Q 008371 234 TSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIA-IGLRGFAQLHQ--STVARL--ADWE 308 (568)
Q Consensus 234 ~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~-~~l~~~~~~~~--~~~~~~--~d~~ 308 (568)
|||||.+++.++.++++ .+++++++++............+......+...+. .....+..... ..+... .+..
T Consensus 77 ~S~Gg~ia~~~a~~~~~--~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (251)
T TIGR03695 77 YSMGGRIALYYALQYPE--RVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPE 154 (251)
T ss_pred eccHHHHHHHHHHhCch--heeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChH
Confidence 99999999999999988 79999999875443221111000000000000000 00011100000 000000 0000
Q ss_pred hhhccCCHHHHHHhhhcccCCCCCHHHHHHh------CCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEE
Q 008371 309 GITKSRSIRDFDNHATRVLGKFETVDAYYRH------SSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIIL 382 (568)
Q Consensus 309 ~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~------~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l 382 (568)
....+..... .........++.. ......+.++++|+++++|++|+.++ +.. .......++.++
T Consensus 155 ------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~-~~~~~~~~~~~~ 224 (251)
T TIGR03695 155 ------QRQALRAKRL--ANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIA-KEMQKLLPNLTL 224 (251)
T ss_pred ------HhHHHHHhcc--cccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHH-HHHHhcCCCCcE
Confidence 0000000000 0000111111111 11224567899999999999998764 222 224566788999
Q ss_pred EEeCCCCccccccccccCcccHHHHHHHHH
Q 008371 383 ATTRHGGHLAFYEGITAKSLWWVRAVNVFL 412 (568)
Q Consensus 383 ~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL 412 (568)
++++++||+.++| .+..+.+.+.+|+
T Consensus 225 ~~~~~~gH~~~~e----~~~~~~~~i~~~l 250 (251)
T TIGR03695 225 VIIANAGHNIHLE----NPEAFAKILLAFL 250 (251)
T ss_pred EEEcCCCCCcCcc----ChHHHHHHHHHHh
Confidence 9999999999998 3445778888887
No 33
>PRK07581 hypothetical protein; Validated
Probab=99.84 E-value=8.2e-20 Score=190.96 Aligned_cols=254 Identities=16% Similarity=0.098 Sum_probs=141.9
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHH---HHHHhCCceEEEEcCCCCCCCCCCCC--CCCC-C-----CcHHHHHHHHHHHH
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLA---FKMAGHGWNVVVSNHRGLGGISLTSD--CFYN-G-----GWTEDLRRVIDYLH 221 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~---~~l~~~Gy~Vvv~D~RG~G~S~~~~~--~~~~-~-----~~~~Dl~~vi~~l~ 221 (568)
+.|+||++||+++++. .+ ..++ ..+...+|+|+++|+||||.|+.... ..|. . ...+|+.+....+.
T Consensus 40 ~~~~vll~~~~~~~~~-~~-~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 117 (339)
T PRK07581 40 KDNAILYPTWYSGTHQ-DN-EWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLT 117 (339)
T ss_pred CCCEEEEeCCCCCCcc-cc-hhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHH
Confidence 4577888888765443 22 2232 35656789999999999999975432 1122 1 23577777666565
Q ss_pred HHCCCCc-EEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHH--------------HHH
Q 008371 222 CQYPEVP-LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYD--------------RVI 286 (568)
Q Consensus 222 ~~~~~~~-i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~--------------~~l 286 (568)
+.....+ .++|||||||++++.++.++|+ +|+++|++++............+.....+.. ..+
T Consensus 118 ~~lgi~~~~~lvG~S~GG~va~~~a~~~P~--~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 195 (339)
T PRK07581 118 EKFGIERLALVVGWSMGAQQTYHWAVRYPD--MVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFNGGWYAEPPERGL 195 (339)
T ss_pred HHhCCCceEEEEEeCHHHHHHHHHHHHCHH--HHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHH
Confidence 5556668 4799999999999999999998 8999999986543221111100000000000 000
Q ss_pred HHHhHhhHH-hhhhhhhccCChhhhhccCCHHHH-HHhhhccc--CCCCCHHHH----HH-----h----CCcccccCCC
Q 008371 287 AIGLRGFAQ-LHQSTVARLADWEGITKSRSIRDF-DNHATRVL--GKFETVDAY----YR-----H----SSSANFVRNV 349 (568)
Q Consensus 287 ~~~l~~~~~-~~~~~~~~~~d~~~i~~~~~l~~f-d~~~~~~~--~g~~~~~~y----y~-----~----~s~~~~l~~I 349 (568)
......... ...+.+.+...+... ......+. ........ ......... ++ . ......+.+|
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I 274 (339)
T PRK07581 196 RAHARVYAGWGFSQAFYRQELWRAM-GYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSI 274 (339)
T ss_pred HHHHHHHHHHHhHHHHHHhhhcccc-ChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcC
Confidence 000000000 000000000000000 00000000 00000000 000011111 00 0 0123467789
Q ss_pred ccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC-CCccccccccccCcccHHHHHHHHHHHhh
Q 008371 350 SVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRH-GGHLAFYEGITAKSLWWVRAVNVFLDALN 416 (568)
Q Consensus 350 ~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~-GGH~~f~eg~~~~~~w~~~~i~eFL~~~~ 416 (568)
++|+|+|+|++|.++|++.... ..+..++.+++++++ +||+.++| .+..+.+.|.+||++++
T Consensus 275 ~~PtLvI~G~~D~~~p~~~~~~-l~~~ip~a~l~~i~~~~GH~~~~~----~~~~~~~~~~~~~~~~~ 337 (339)
T PRK07581 275 TAKTFVMPISTDLYFPPEDCEA-EAALIPNAELRPIESIWGHLAGFG----QNPADIAFIDAALKELL 337 (339)
T ss_pred CCCEEEEEeCCCCCCCHHHHHH-HHHhCCCCeEEEeCCCCCcccccc----CcHHHHHHHHHHHHHHH
Confidence 9999999999999999876554 456678999999998 89999998 44578899999998875
No 34
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.84 E-value=1.7e-19 Score=184.19 Aligned_cols=264 Identities=11% Similarity=0.040 Sum_probs=145.6
Q ss_pred CCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcC
Q 008371 112 ISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (568)
Q Consensus 112 ~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~ 191 (568)
.+++...+++ +|.++.+.-. +.+|+|||+||++. +...| +.++..|.+ +|+|+++|+
T Consensus 12 ~~~~~~~~~~-~~~~i~y~~~-------------------G~~~~iv~lHG~~~-~~~~~-~~~~~~l~~-~~~vi~~D~ 68 (286)
T PRK03204 12 YPFESRWFDS-SRGRIHYIDE-------------------GTGPPILLCHGNPT-WSFLY-RDIIVALRD-RFRCVAPDY 68 (286)
T ss_pred ccccceEEEc-CCcEEEEEEC-------------------CCCCEEEEECCCCc-cHHHH-HHHHHHHhC-CcEEEEECC
Confidence 3455666666 5666655321 13478999999964 43344 667777764 699999999
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhh--
Q 008371 192 RGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLIC-- 269 (568)
Q Consensus 192 RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~-- 269 (568)
||||.|+......+ ..+|..+.+..+.+..+..+++++||||||.+++.++..+++ +|+++|+++++......
T Consensus 69 ~G~G~S~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~--~v~~lvl~~~~~~~~~~~~ 143 (286)
T PRK03204 69 LGFGLSERPSGFGY---QIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERAD--RVRGVVLGNTWFWPADTLA 143 (286)
T ss_pred CCCCCCCCCCcccc---CHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChh--heeEEEEECccccCCCchh
Confidence 99999976432222 235666666665555566789999999999999999999988 89999988765311100
Q ss_pred hHHHhHHHHHH-HHHHHHHHH--hHhhHHhhhhhhhccCChhh---hhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcc
Q 008371 270 DRFINRRLVQK-CYDRVIAIG--LRGFAQLHQSTVARLADWEG---ITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSA 343 (568)
Q Consensus 270 ~~~~~~~~~~~-~~~~~l~~~--l~~~~~~~~~~~~~~~d~~~---i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~ 343 (568)
........... .....+... ..+.... ......+... ....................+......... ..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 218 (286)
T PRK03204 144 MKAFSRVMSSPPVQYAILRRNFFVERLIPA---GTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLAR--LA 218 (286)
T ss_pred HHHHHHHhccccchhhhhhhhHHHHHhccc---cccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHH--hh
Confidence 00000000000 000000000 0000000 0000000000 000000000000000000000000000000 00
Q ss_pred cccC--CCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHH
Q 008371 344 NFVR--NVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFL 412 (568)
Q Consensus 344 ~~l~--~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL 412 (568)
..+. .+++|+|+|+|++|.++++........+..++.++++++++||+.+.| .+..+++.+.+||
T Consensus 219 ~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e----~Pe~~~~~i~~~~ 285 (286)
T PRK03204 219 REVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQED----APDRIAAAIIERF 285 (286)
T ss_pred hhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCccccccc----CHHHHHHHHHHhc
Confidence 1111 138999999999999987654333356788999999999999999998 4556888888886
No 35
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.84 E-value=3.5e-20 Score=183.40 Aligned_cols=231 Identities=16% Similarity=0.150 Sum_probs=130.4
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG 233 (568)
+|+||++||+++++ ..| +.++..+ + +|+|+++|+||||.|+..... ....+.+|+.++++. .+..+++++|
T Consensus 2 ~p~vvllHG~~~~~-~~w-~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~l~~~l~~----~~~~~~~lvG 72 (242)
T PRK11126 2 LPWLVFLHGLLGSG-QDW-QPVGEAL-P-DYPRLYIDLPGHGGSAAISVD-GFADVSRLLSQTLQS----YNILPYWLVG 72 (242)
T ss_pred CCEEEEECCCCCCh-HHH-HHHHHHc-C-CCCEEEecCCCCCCCCCcccc-CHHHHHHHHHHHHHH----cCCCCeEEEE
Confidence 47799999997654 455 6788877 3 799999999999999754321 112233444444443 3457999999
Q ss_pred ecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHH-HHhHhhHHhh--hhhhhccCChhhh
Q 008371 234 TSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIA-IGLRGFAQLH--QSTVARLADWEGI 310 (568)
Q Consensus 234 ~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~-~~l~~~~~~~--~~~~~~~~d~~~i 310 (568)
|||||.+++.++.++++. +++++++++++...........+......+...+. ..+....... ...+... ...
T Consensus 73 ~S~Gg~va~~~a~~~~~~-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 148 (242)
T PRK11126 73 YSLGGRIAMYYACQGLAG-GLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASL-NAE-- 148 (242)
T ss_pred ECHHHHHHHHHHHhCCcc-cccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhcc-Ccc--
Confidence 999999999999998652 49999988766533221111100000000000000 0000000000 0000000 000
Q ss_pred hccCCHHHHHHhhhcccCCCCCHHHHHHh------CCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEE
Q 008371 311 TKSRSIRDFDNHATRVLGKFETVDAYYRH------SSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILAT 384 (568)
Q Consensus 311 ~~~~~l~~fd~~~~~~~~g~~~~~~yy~~------~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~ 384 (568)
....+..... ...+ .....++.. ......+.+|++|+++|+|++|+++. . ... ..+.++++
T Consensus 149 ----~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~-~~~-~~~~~~~~ 215 (242)
T PRK11126 149 ----QRQQLVAKRS-NNNG-AAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----A-LAQ-QLALPLHV 215 (242)
T ss_pred ----HHHHHHHhcc-cCCH-HHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----H-HHH-HhcCeEEE
Confidence 0000000000 0000 001111111 11234678999999999999998652 1 122 24789999
Q ss_pred eCCCCccccccccccCcccHHHHHHHHHHH
Q 008371 385 TRHGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (568)
Q Consensus 385 ~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~ 414 (568)
++++||+.++| .+..+.+.|.+|++.
T Consensus 216 i~~~gH~~~~e----~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 216 IPNAGHNAHRE----NPAAFAASLAQILRL 241 (242)
T ss_pred eCCCCCchhhh----ChHHHHHHHHHHHhh
Confidence 99999999998 566789999999875
No 36
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.84 E-value=1.8e-20 Score=176.37 Aligned_cols=224 Identities=15% Similarity=0.165 Sum_probs=151.0
Q ss_pred cEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEe
Q 008371 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (568)
Q Consensus 155 PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~ 234 (568)
-.|+++||++|++.+ ++.++++|.++||.|.++++||||..+-.--......|.+|+.+..+++... ....|.++|.
T Consensus 16 ~AVLllHGFTGt~~D--vr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~Gl 92 (243)
T COG1647 16 RAVLLLHGFTGTPRD--VRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVGL 92 (243)
T ss_pred EEEEEEeccCCCcHH--HHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEee
Confidence 569999999997765 6899999999999999999999997652111112246788999999999854 2457999999
Q ss_pred cHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccC
Q 008371 235 SIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSR 314 (568)
Q Consensus 235 SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~ 314 (568)
||||.++++++..++ ++++|.+|+|.........+.. +... ..+.+++... +
T Consensus 93 SmGGv~alkla~~~p----~K~iv~m~a~~~~k~~~~iie~-----~l~y--~~~~kk~e~k---------~-------- 144 (243)
T COG1647 93 SMGGVFALKLAYHYP----PKKIVPMCAPVNVKSWRIIIEG-----LLEY--FRNAKKYEGK---------D-------- 144 (243)
T ss_pred cchhHHHHHHHhhCC----ccceeeecCCcccccchhhhHH-----HHHH--HHHhhhccCC---------C--------
Confidence 999999999998874 7899999999876543222211 1000 0122221111 1
Q ss_pred CHHHHHHhhhcccC-CCCCHHHHHHhC-CcccccCCCccceEEEEeCCCCCCCCCCcchH-HHhcCCCEEEEEeCCCCcc
Q 008371 315 SIRDFDNHATRVLG-KFETVDAYYRHS-SSANFVRNVSVPLLCISTLDDPVCTREAIPWD-ECRANEKIILATTRHGGHL 391 (568)
Q Consensus 315 ~l~~fd~~~~~~~~-g~~~~~~yy~~~-s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~-~~~~~~~~~l~~~~~GGH~ 391 (568)
..++++....... -..+..+++... .....+..|..|++++.|.+|+.+|.++.... ........++.++++.||+
T Consensus 145 -~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHV 223 (243)
T COG1647 145 -QEQIDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHV 223 (243)
T ss_pred -HHHHHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCce
Confidence 1111111100000 001111222111 12456789999999999999999999876653 4455678999999999999
Q ss_pred ccccccccCcccHHHHHHHHHH
Q 008371 392 AFYEGITAKSLWWVRAVNVFLD 413 (568)
Q Consensus 392 ~f~eg~~~~~~w~~~~i~eFL~ 413 (568)
.-.+ .++.-+.+.|.+||+
T Consensus 224 It~D---~Erd~v~e~V~~FL~ 242 (243)
T COG1647 224 ITLD---KERDQVEEDVITFLE 242 (243)
T ss_pred eecc---hhHHHHHHHHHHHhh
Confidence 8765 345568899999987
No 37
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.84 E-value=5.8e-19 Score=188.99 Aligned_cols=244 Identities=17% Similarity=0.131 Sum_probs=155.3
Q ss_pred CCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcC
Q 008371 112 ISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (568)
Q Consensus 112 ~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~ 191 (568)
...++..+...||.++...++.|.. +.+.|+||++||+.+ ....++..++..|+++||+|+++|+
T Consensus 166 ~~~e~v~i~~~~g~~l~g~l~~P~~--------------~~~~P~Vli~gG~~~-~~~~~~~~~~~~La~~Gy~vl~~D~ 230 (414)
T PRK05077 166 GELKELEFPIPGGGPITGFLHLPKG--------------DGPFPTVLVCGGLDS-LQTDYYRLFRDYLAPRGIAMLTIDM 230 (414)
T ss_pred CceEEEEEEcCCCcEEEEEEEECCC--------------CCCccEEEEeCCccc-chhhhHHHHHHHHHhCCCEEEEECC
Confidence 3567888888888788887776642 356789988888754 3333446788899999999999999
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhh
Q 008371 192 RGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLIC 269 (568)
Q Consensus 192 RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~--~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~ 269 (568)
||+|.|.... ..........++++++.... +..+++++||||||++++.++..+++ +|+++|+++++.+....
T Consensus 231 pG~G~s~~~~---~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~--ri~a~V~~~~~~~~~~~ 305 (414)
T PRK05077 231 PSVGFSSKWK---LTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP--RLKAVACLGPVVHTLLT 305 (414)
T ss_pred CCCCCCCCCC---ccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc--CceEEEEECCccchhhc
Confidence 9999986421 11222334467888887653 34689999999999999999998887 79999999988652211
Q ss_pred hHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccc-cCC
Q 008371 270 DRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANF-VRN 348 (568)
Q Consensus 270 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~-l~~ 348 (568)
........ ...+...+... +. .. ......+...+ ..+... .... ..+
T Consensus 306 ~~~~~~~~-p~~~~~~la~~-----------lg-~~-------~~~~~~l~~~l----~~~sl~--------~~~~l~~~ 353 (414)
T PRK05077 306 DPKRQQQV-PEMYLDVLASR-----------LG-MH-------DASDEALRVEL----NRYSLK--------VQGLLGRR 353 (414)
T ss_pred chhhhhhc-hHHHHHHHHHH-----------hC-CC-------CCChHHHHHHh----hhccch--------hhhhhccC
Confidence 11000000 00010001000 00 00 00011111111 000000 0011 157
Q ss_pred CccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHh
Q 008371 349 VSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (568)
Q Consensus 349 I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~ 415 (568)
+++|+|+|+|++|+++|.+.... .....++.++++++++. +++ .+..+.+.+.+||+..
T Consensus 354 i~~PvLiI~G~~D~ivP~~~a~~-l~~~~~~~~l~~i~~~~---~~e----~~~~~~~~i~~wL~~~ 412 (414)
T PRK05077 354 CPTPMLSGYWKNDPFSPEEDSRL-IASSSADGKLLEIPFKP---VYR----NFDKALQEISDWLEDR 412 (414)
T ss_pred CCCcEEEEecCCCCCCCHHHHHH-HHHhCCCCeEEEccCCC---ccC----CHHHHHHHHHHHHHHH
Confidence 99999999999999999887664 45667899999999863 233 3345789999999765
No 38
>PLN02872 triacylglycerol lipase
Probab=99.83 E-value=4.5e-20 Score=195.55 Aligned_cols=306 Identities=18% Similarity=0.171 Sum_probs=176.4
Q ss_pred chhhHHhhhhhhcCCCCCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHH---
Q 008371 95 SPHLQTAFLTFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAY--- 171 (568)
Q Consensus 95 ~ghlqT~~~~~~~~~p~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y--- 171 (568)
..-+||++..++.+. ..+.+++.++++||..|.+++..+.... .....+|+|+++||+.+++..+.
T Consensus 26 ~~~~~t~~~~~i~~~-gy~~e~h~v~T~DGy~L~l~ri~~~~~~----------~~~~~~~~Vll~HGl~~ss~~w~~~~ 94 (395)
T PLN02872 26 RSPVESLCAQLIHPA-GYSCTEHTIQTKDGYLLALQRVSSRNPR----------LGSQRGPPVLLQHGLFMAGDAWFLNS 94 (395)
T ss_pred CCCchhhHHHHHHHc-CCCceEEEEECCCCcEEEEEEcCCCCCC----------CCCCCCCeEEEeCcccccccceeecC
Confidence 346899988877654 5788999999999999999987532210 01234688999999976554321
Q ss_pred -HHHHHHHHHhCCceEEEEcCCCCCCCCCC------CCCCCCCCc----HHHHHHHHHHHHHHCCCCcEEEEEecHHHHH
Q 008371 172 -IKHLAFKMAGHGWNVVVSNHRGLGGISLT------SDCFYNGGW----TEDLRRVIDYLHCQYPEVPLYAVGTSIGANI 240 (568)
Q Consensus 172 -~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~------~~~~~~~~~----~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~i 240 (568)
.+.++..|+++||+|+++|.||++.+... ...+....+ ..|+.++++++.+..+ .++++|||||||.+
T Consensus 95 ~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~-~~v~~VGhS~Gg~~ 173 (395)
T PLN02872 95 PEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITN-SKIFIVGHSQGTIM 173 (395)
T ss_pred cccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccC-CceEEEEECHHHHH
Confidence 13577788999999999999998765321 111111122 2699999999986543 68999999999999
Q ss_pred HHHHHHhcCC-CCCceEEEEEcCCCChhhhhHHHhHHH----HHHHHHH--------------HHHHHhHhhHHhhhhhh
Q 008371 241 LVKYLGENGV-NTPLVGAAAICSPWDLLICDRFINRRL----VQKCYDR--------------VIAIGLRGFAQLHQSTV 301 (568)
Q Consensus 241 al~ya~~~~~-~~~I~a~V~is~p~d~~~~~~~~~~~~----~~~~~~~--------------~l~~~l~~~~~~~~~~~ 301 (568)
++.++ ..|+ +.+|+++++++|...+......+.... ...++.. .+...+..........+
T Consensus 174 ~~~~~-~~p~~~~~v~~~~~l~P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~ 252 (395)
T PLN02872 174 SLAAL-TQPNVVEMVEAAALLCPISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLL 252 (395)
T ss_pred HHHHh-hChHHHHHHHHHHHhcchhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHH
Confidence 98655 4443 225888888877543321111110000 0000000 00000000000000000
Q ss_pred hcc------CChhhh-------hccCCHHH---HHHhhhcc---cCCCCC--HHHHHHh-CCcccccCCC--ccceEEEE
Q 008371 302 ARL------ADWEGI-------TKSRSIRD---FDNHATRV---LGKFET--VDAYYRH-SSSANFVRNV--SVPLLCIS 357 (568)
Q Consensus 302 ~~~------~d~~~i-------~~~~~l~~---fd~~~~~~---~~g~~~--~~~yy~~-~s~~~~l~~I--~vPvLiI~ 357 (568)
... .+...+ ....+.+. |...+... .+.|.. -...|.. ..+...+.+| ++|+++++
T Consensus 253 ~~~~g~~~~~n~~~~~~~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~ 332 (395)
T PLN02872 253 TSITGTNCCFNASRIDYYLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGY 332 (395)
T ss_pred HHHhCCCcccchhhhhHHHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEE
Confidence 000 010000 01122222 22222111 122221 1222333 3445567888 68999999
Q ss_pred eCCCCCCCCCCcchHHHhcCCC-EEEEEeCCCCccccccccccCcccHHHHHHHHHHHh
Q 008371 358 TLDDPVCTREAIPWDECRANEK-IILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (568)
Q Consensus 358 G~dDpivp~~~~~~~~~~~~~~-~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~ 415 (568)
|++|.+++++...... +..++ ..+..+++.||+.|+-+. ..+..+.+.|.+|+++.
T Consensus 333 G~~D~lv~~~dv~~l~-~~Lp~~~~l~~l~~~gH~dfi~~~-eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 333 GGTDGLADVTDVEHTL-AELPSKPELLYLENYGHIDFLLST-SAKEDVYNHMIQFFRSL 389 (395)
T ss_pred cCCCCCCCHHHHHHHH-HHCCCccEEEEcCCCCCHHHHhCc-chHHHHHHHHHHHHHHh
Confidence 9999999987665533 33344 678889999999776321 23446789999999854
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.82 E-value=7.1e-19 Score=181.31 Aligned_cols=126 Identities=14% Similarity=0.089 Sum_probs=89.7
Q ss_pred eEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCC
Q 008371 115 KRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGL 194 (568)
Q Consensus 115 ~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~ 194 (568)
...++...||.++.+.-.. ..+.+.||++||+.++.... .....+...+|+|+++|+|||
T Consensus 5 ~~~~~~~~~~~~l~y~~~g-----------------~~~~~~lvllHG~~~~~~~~---~~~~~~~~~~~~vi~~D~~G~ 64 (306)
T TIGR01249 5 VSGYLNVSDNHQLYYEQSG-----------------NPDGKPVVFLHGGPGSGTDP---GCRRFFDPETYRIVLFDQRGC 64 (306)
T ss_pred cCCeEEcCCCcEEEEEECc-----------------CCCCCEEEEECCCCCCCCCH---HHHhccCccCCEEEEECCCCC
Confidence 4567888899888764321 12245689999987654321 233445456899999999999
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCC
Q 008371 195 GGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (568)
Q Consensus 195 G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~ 264 (568)
|.|+.... .+ ....+|+.+.+..+.+..+..+++++||||||.+++.++.++|+ +++++|++++..
T Consensus 65 G~S~~~~~-~~-~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~--~v~~lvl~~~~~ 130 (306)
T TIGR01249 65 GKSTPHAC-LE-ENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPE--VVTGLVLRGIFL 130 (306)
T ss_pred CCCCCCCC-cc-cCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChH--hhhhheeecccc
Confidence 99985422 11 12335555555555555556689999999999999999999988 799999987644
No 40
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.82 E-value=1.5e-19 Score=180.95 Aligned_cols=249 Identities=17% Similarity=0.169 Sum_probs=156.2
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCC-CCCC-CCcHHHHHHHHHHHHHHCCCCc
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSD-CFYN-GGWTEDLRRVIDYLHCQYPEVP 228 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~-~~~~-~~~~~Dl~~vi~~l~~~~~~~~ 228 (568)
.+..|+|+++||+.-.+. .| +.....|+.+||+|+++|+||+|.|+.+.. ..|+ ...+.|+..+++++. .++
T Consensus 41 ~~~gP~illlHGfPe~wy-sw-r~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg----~~k 114 (322)
T KOG4178|consen 41 PGDGPIVLLLHGFPESWY-SW-RHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLG----LKK 114 (322)
T ss_pred CCCCCEEEEEccCCccch-hh-hhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhc----cce
Confidence 467899999999986443 33 688899999999999999999999987654 2333 234478888888776 569
Q ss_pred EEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhh---hhHHHh---HH----------HHHHHHHHHHHHHhHh
Q 008371 229 LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLI---CDRFIN---RR----------LVQKCYDRVIAIGLRG 292 (568)
Q Consensus 229 i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~---~~~~~~---~~----------~~~~~~~~~l~~~l~~ 292 (568)
++++||+|||++++.++..+|+ +|++.|+++.+..... ...... +. .....+.......+..
T Consensus 115 ~~lvgHDwGaivaw~la~~~Pe--rv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~ 192 (322)
T KOG4178|consen 115 AFLVGHDWGAIVAWRLALFYPE--RVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVK 192 (322)
T ss_pred eEEEeccchhHHHHHHHHhChh--hcceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHH
Confidence 9999999999999999999999 8999999998776110 000000 00 0000011100001100
Q ss_pred hHHh-hhh---hhhc--c--CChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCc-----ccccCCCccceEEEEeC
Q 008371 293 FAQL-HQS---TVAR--L--ADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSS-----ANFVRNVSVPLLCISTL 359 (568)
Q Consensus 293 ~~~~-~~~---~~~~--~--~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~-----~~~l~~I~vPvLiI~G~ 359 (568)
.... ... .... . ..|. ....++-++..+ ...++..-.+||+.... ...+.+|++|+++|+|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~w~---t~edi~~~~~~f--~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~ 267 (322)
T KOG4178|consen 193 TFRTRKTPGPLIVPKQPNENPLWL---TEEDIAFYVSKF--QIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGD 267 (322)
T ss_pred hhhccccCCccccCCCCCCccchh---hHHHHHHHHhcc--ccccccccchhhHHHhhCchhccccccccccceEEEEec
Confidence 0000 000 0000 0 0000 001111222222 22345555566665433 34567899999999999
Q ss_pred CCCCCCCCCcchHHHhcCCCE-EEEEeCCCCccccccccccCcccHHHHHHHHHHHhh
Q 008371 360 DDPVCTREAIPWDECRANEKI-ILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALN 416 (568)
Q Consensus 360 dDpivp~~~~~~~~~~~~~~~-~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~ 416 (568)
.|++.+.........+..++. +.++++++||+...| ++..+++.+.+|+++..
T Consensus 268 ~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe----~p~~v~~~i~~f~~~~~ 321 (322)
T KOG4178|consen 268 LDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQE----KPQEVNQAILGFINSFS 321 (322)
T ss_pred CcccccchhHHHHHHHhhccccceEEecCCccccccc----CHHHHHHHHHHHHHhhc
Confidence 999998762222233444544 788899999998887 66789999999998753
No 41
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.82 E-value=3.8e-18 Score=182.37 Aligned_cols=259 Identities=13% Similarity=0.079 Sum_probs=138.4
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcH-HHHHH-HHHHHHHHCCCCcE
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWT-EDLRR-VIDYLHCQYPEVPL 229 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-~Dl~~-vi~~l~~~~~~~~i 229 (568)
..+|+||++||+++ +...| ...+..|.+ +|+|+++|+||||.|+............ +++.+ +.+++ +.....++
T Consensus 103 ~~~p~vvllHG~~~-~~~~~-~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~-~~l~~~~~ 178 (402)
T PLN02894 103 EDAPTLVMVHGYGA-SQGFF-FRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWR-KAKNLSNF 178 (402)
T ss_pred CCCCEEEEECCCCc-chhHH-HHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHH-HHcCCCCe
Confidence 45689999999965 44445 346677765 6999999999999997532111111111 12222 22333 33345689
Q ss_pred EEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHH---HhH---HHHHHHHHHH---------HHHHhH---
Q 008371 230 YAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRF---INR---RLVQKCYDRV---------IAIGLR--- 291 (568)
Q Consensus 230 ~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~---~~~---~~~~~~~~~~---------l~~~l~--- 291 (568)
+++||||||.+++.++.++++ +++++|++++.......... ..+ .+...+.... +.....
T Consensus 179 ~lvGhS~GG~la~~~a~~~p~--~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~ 256 (402)
T PLN02894 179 ILLGHSFGGYVAAKYALKHPE--HVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWG 256 (402)
T ss_pred EEEEECHHHHHHHHHHHhCch--hhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchh
Confidence 999999999999999999988 89999998764322111110 000 0000000000 000000
Q ss_pred -hhHHhhh-hhhhccCChhhhhccCCHHHHHHhhhcccCCCCCH---HHH------HHhCCcccccCCCccceEEEEeCC
Q 008371 292 -GFAQLHQ-STVARLADWEGITKSRSIRDFDNHATRVLGKFETV---DAY------YRHSSSANFVRNVSVPLLCISTLD 360 (568)
Q Consensus 292 -~~~~~~~-~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~---~~y------y~~~s~~~~l~~I~vPvLiI~G~d 360 (568)
....... ..+........+ .......+.+.+......-.+. ..+ ....+....+.+|++|+++|+|++
T Consensus 257 ~~l~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~ 335 (402)
T PLN02894 257 PNLVRRYTTARFGAHSTGDIL-SEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRH 335 (402)
T ss_pred HHHHHHHHHHHhhhccccccc-CcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCC
Confidence 0000000 000000000000 0000011111110000000000 000 111122345788999999999999
Q ss_pred CCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhhcCCCCC
Q 008371 361 DPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTSPYVN 422 (568)
Q Consensus 361 Dpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~~~~~~ 422 (568)
|.+.+.. .........+++++++++++||+.+.| .+..+++.+.+|++.+......+
T Consensus 336 D~i~~~~-~~~~~~~~~~~~~~~~i~~aGH~~~~E----~P~~f~~~l~~~~~~~~~~~~~~ 392 (402)
T PLN02894 336 DWMNYEG-AVEARKRMKVPCEIIRVPQGGHFVFLD----NPSGFHSAVLYACRKYLSPDREE 392 (402)
T ss_pred CCCCcHH-HHHHHHHcCCCCcEEEeCCCCCeeecc----CHHHHHHHHHHHHHHhccCCchh
Confidence 9877633 322233334568899999999999998 45569999999999888764433
No 42
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.81 E-value=3.9e-18 Score=171.18 Aligned_cols=301 Identities=15% Similarity=0.140 Sum_probs=166.9
Q ss_pred CCCCCCCCchh--hHHhhhhhhcCCCCCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCC
Q 008371 87 YLPTPWLSSPH--LQTAFLTFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT 164 (568)
Q Consensus 87 y~P~~wl~~gh--lqT~~~~~~~~~p~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~ 164 (568)
+.|+.|+...+ +++.-..++... .++|..+.+..+++..+-.--..+ ....++.+|++||++
T Consensus 37 ~~~~~w~~~~~~~l~~~e~ril~~~-~v~~~~~~v~i~~~~~iw~~~~~~---------------~~~~~~plVliHGyG 100 (365)
T KOG4409|consen 37 WLPTLWCSTSRDQLKEAEKRILSSV-PVPYSKKYVRIPNGIEIWTITVSN---------------ESANKTPLVLIHGYG 100 (365)
T ss_pred cCCcccccchHHHHHHHHHhhhhhc-CCCcceeeeecCCCceeEEEeecc---------------cccCCCcEEEEeccc
Confidence 45556876554 665544444333 478888999888766553211111 124556689999997
Q ss_pred CCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHH
Q 008371 165 SDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKY 244 (568)
Q Consensus 165 G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~y 244 (568)
++.. .|.+ -.+.|++ .++|+++|++|+|+|+.+.-..-.........+-|+.-+...+-.+++++||||||+++..|
T Consensus 101 Ag~g-~f~~-Nf~~La~-~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~Y 177 (365)
T KOG4409|consen 101 AGLG-LFFR-NFDDLAK-IRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKY 177 (365)
T ss_pred hhHH-HHHH-hhhhhhh-cCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHH
Confidence 6554 4544 4466665 79999999999999986432211122334566666666777777899999999999999999
Q ss_pred HHhcCCCCCceEEEEEcCCCChhhh---hHHHhHHHHHHHHHHHHH--------HHhHhhHHhhhhhhhccCChhhhhcc
Q 008371 245 LGENGVNTPLVGAAAICSPWDLLIC---DRFINRRLVQKCYDRVIA--------IGLRGFAQLHQSTVARLADWEGITKS 313 (568)
Q Consensus 245 a~~~~~~~~I~a~V~is~p~d~~~~---~~~~~~~~~~~~~~~~l~--------~~l~~~~~~~~~~~~~~~d~~~i~~~ 313 (568)
|.++|+ +|+.+|+++|..-.... ..+... ....+ +.+. ..+-+......+.+......+...+.
T Consensus 178 AlKyPe--rV~kLiLvsP~Gf~~~~~~~~~~~~~--~~~w~-~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~ 252 (365)
T KOG4409|consen 178 ALKYPE--RVEKLILVSPWGFPEKPDSEPEFTKP--PPEWY-KALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKF 252 (365)
T ss_pred HHhChH--hhceEEEecccccccCCCcchhhcCC--ChHHH-hhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhc
Confidence 999999 89999998763221111 001000 00011 0000 00000000000000000000111111
Q ss_pred CC--HHHH-HHhhhcccCCCCCHHHHHH---------hCCcccccCCCc--cceEEEEeCCCCCCCCCCcchHHHhcCCC
Q 008371 314 RS--IRDF-DNHATRVLGKFETVDAYYR---------HSSSANFVRNVS--VPLLCISTLDDPVCTREAIPWDECRANEK 379 (568)
Q Consensus 314 ~~--l~~f-d~~~~~~~~g~~~~~~yy~---------~~s~~~~l~~I~--vPvLiI~G~dDpivp~~~~~~~~~~~~~~ 379 (568)
.. -.++ .+.+......-.+.+.-+. +-...+.+..++ +|+++|+|++|-+--..............
T Consensus 253 ~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l~~~~pv~fiyG~~dWmD~~~g~~~~~~~~~~~ 332 (365)
T KOG4409|consen 253 PSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLRELKKDVPVTFIYGDRDWMDKNAGLEVTKSLMKEY 332 (365)
T ss_pred cccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhhccCCCEEEEecCcccccchhHHHHHHHhhccc
Confidence 00 1111 1111111111111111111 111234455554 99999999999765433322222235667
Q ss_pred EEEEEeCCCCccccccccccCcccHHHHHHHHHHHh
Q 008371 380 IILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (568)
Q Consensus 380 ~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~ 415 (568)
+..++++++||..|.+ ++.-+++.|.++++..
T Consensus 333 ~~~~~v~~aGHhvylD----np~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 333 VEIIIVPGAGHHVYLD----NPEFFNQIVLEECDKV 364 (365)
T ss_pred ceEEEecCCCceeecC----CHHHHHHHHHHHHhcc
Confidence 9999999999999998 5667899999988753
No 43
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.81 E-value=4.5e-19 Score=183.55 Aligned_cols=282 Identities=17% Similarity=0.169 Sum_probs=161.5
Q ss_pred ceEEEEEcCCCC-EEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhC-CceEEEEcC
Q 008371 114 YKRHLFQTPDGG-TIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGH-GWNVVVSNH 191 (568)
Q Consensus 114 y~r~~~~~~DGg-~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~-Gy~Vvv~D~ 191 (568)
.+...++.+.|. ++...|+..... ...+.+..+|.||++|||.+ +...| +..+..+.+. |++|+++|.
T Consensus 25 ~~~~~i~~~~g~~~~~~~w~~~~~~--------~~~~~~~~~~pvlllHGF~~-~~~~w-~~~~~~L~~~~~~~v~aiDl 94 (326)
T KOG1454|consen 25 LRSTSIEIPWGPLTIRSKWIPNLDK--------YGSPGDKDKPPVLLLHGFGA-SSFSW-RRVVPLLSKAKGLRVLAIDL 94 (326)
T ss_pred ccceEEEcccCCceeEEEEecccee--------ccCCCCCCCCcEEEeccccC-CcccH-hhhccccccccceEEEEEec
Confidence 344556666665 778888865421 00112246788999999966 44445 6777777665 599999999
Q ss_pred CCCC-CCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEE---EEcCCCChh
Q 008371 192 RGLG-GISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAA---AICSPWDLL 267 (568)
Q Consensus 192 RG~G-~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V---~is~p~d~~ 267 (568)
.|+| .|+.+....| ...+....+..+...+...+++++||||||.+++.+|+.+|+ .|++++ +++++....
T Consensus 95 ~G~g~~s~~~~~~~y---~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~--~V~~lv~~~~~~~~~~~~ 169 (326)
T KOG1454|consen 95 PGHGYSSPLPRGPLY---TLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPE--TVDSLVLLDLLGPPVYST 169 (326)
T ss_pred CCCCcCCCCCCCCce---ehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcc--cccceeeecccccccccC
Confidence 9999 4444333333 235566666666666667789999999999999999999999 899999 666665543
Q ss_pred hhhHHHhHHHHHHHHHHH-HHHH--hHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhccc--CCCC----CHHHHHH
Q 008371 268 ICDRFINRRLVQKCYDRV-IAIG--LRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVL--GKFE----TVDAYYR 338 (568)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~-l~~~--l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~--~g~~----~~~~yy~ 338 (568)
.............+.... .... +..........+....-............+.+...... ...+ +...+..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (326)
T KOG1454|consen 170 PKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELL 249 (326)
T ss_pred CcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEecc
Confidence 322111111111000000 0000 00000000000000000000000011111111111110 0000 0000000
Q ss_pred --hCCcccccCCCc-cceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHh
Q 008371 339 --HSSSANFVRNVS-VPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (568)
Q Consensus 339 --~~s~~~~l~~I~-vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~ 415 (568)
.......+.+|. +|+|+++|+.|+++|.+.... ..+..||+++++++++||+.+.| .+..+++.+..|+...
T Consensus 250 ~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~-~~~~~pn~~~~~I~~~gH~~h~e----~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 250 GFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEE-LKKKLPNAELVEIPGAGHLPHLE----RPEEVAALLRSFIARL 324 (326)
T ss_pred CccchHHHhhccccCCceEEEEcCcCCccCHHHHHH-HHhhCCCceEEEeCCCCcccccC----CHHHHHHHHHHHHHHh
Confidence 112234567776 999999999999999984443 45556999999999999999997 4556899999999865
No 44
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.81 E-value=3.5e-19 Score=186.67 Aligned_cols=232 Identities=10% Similarity=0.028 Sum_probs=126.2
Q ss_pred HHHHHHH---HHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCc-EEEEEecHHHHHHHHHHH
Q 008371 171 YIKHLAF---KMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVP-LYAVGTSIGANILVKYLG 246 (568)
Q Consensus 171 y~~~l~~---~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~-i~lvG~SmGG~ial~ya~ 246 (568)
++..++. .|...+|+|+++|+||||.|... ........+|+.++++.+. ..+ ++++||||||++++.++.
T Consensus 84 ~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~--~~~~~~~a~dl~~ll~~l~----l~~~~~lvG~SmGG~vA~~~A~ 157 (343)
T PRK08775 84 WWEGLVGSGRALDPARFRLLAFDFIGADGSLDV--PIDTADQADAIALLLDALG----IARLHAFVGYSYGALVGLQFAS 157 (343)
T ss_pred cchhccCCCCccCccccEEEEEeCCCCCCCCCC--CCCHHHHHHHHHHHHHHcC----CCcceEEEEECHHHHHHHHHHH
Confidence 3455665 45445799999999999987532 1112334566666666542 334 579999999999999999
Q ss_pred hcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHH------------HHHHH--hHhh--HHhhhhhhhccCChhhh
Q 008371 247 ENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDR------------VIAIG--LRGF--AQLHQSTVARLADWEGI 310 (568)
Q Consensus 247 ~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~------------~l~~~--l~~~--~~~~~~~~~~~~d~~~i 310 (568)
++|+ +|+++|++++............ .. .+.... ..... +..+ .......+.........
T Consensus 158 ~~P~--~V~~LvLi~s~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (343)
T PRK08775 158 RHPA--RVRTLVVVSGAHRAHPYAAAWR-AL-QRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVING 233 (343)
T ss_pred HChH--hhheEEEECccccCCHHHHHHH-HH-HHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCC
Confidence 9998 8999999987644321110000 00 000000 00000 0000 00000000000000000
Q ss_pred hccCCHHHHHH----hhhcccCCCCCHHHHHHhCC-cccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEe
Q 008371 311 TKSRSIRDFDN----HATRVLGKFETVDAYYRHSS-SANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATT 385 (568)
Q Consensus 311 ~~~~~l~~fd~----~~~~~~~g~~~~~~yy~~~s-~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~ 385 (568)
........+-. ..... ..........+... ....+.+|++|+|+|+|++|.++|.+..........++..++++
T Consensus 234 ~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i 312 (343)
T PRK08775 234 RVRVAAEDYLDAAGAQYVAR-TPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVL 312 (343)
T ss_pred CccchHHHHHHHHHHHHHHh-cChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEE
Confidence 00000111100 00000 00000111111111 12246789999999999999999977554433334478999999
Q ss_pred CC-CCccccccccccCcccHHHHHHHHHHHhhc
Q 008371 386 RH-GGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (568)
Q Consensus 386 ~~-GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~ 417 (568)
++ +||+.++| .+..+++.+.+||++..+
T Consensus 313 ~~~aGH~~~lE----~Pe~~~~~l~~FL~~~~~ 341 (343)
T PRK08775 313 RSPYGHDAFLK----ETDRIDAILTTALRSTGE 341 (343)
T ss_pred eCCccHHHHhc----CHHHHHHHHHHHHHhccc
Confidence 85 99999998 566799999999987654
No 45
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.80 E-value=8.3e-19 Score=184.36 Aligned_cols=112 Identities=19% Similarity=0.133 Sum_probs=76.3
Q ss_pred CCcEEEEeCCCCCCchhH---------HHHHHH---HHHHhCCceEEEEcCCC--CCCCCCCC----CCCCC----CCcH
Q 008371 153 KNPIVVVIPGLTSDSAAA---------YIKHLA---FKMAGHGWNVVVSNHRG--LGGISLTS----DCFYN----GGWT 210 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~---------y~~~l~---~~l~~~Gy~Vvv~D~RG--~G~S~~~~----~~~~~----~~~~ 210 (568)
..|+||++||+++++... |+..++ ..+..++|+|+++|+|| +|.|...+ ...+. ....
T Consensus 30 ~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~ 109 (351)
T TIGR01392 30 RSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITI 109 (351)
T ss_pred CCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcH
Confidence 357899999998755432 345554 25656799999999999 44443211 11111 1123
Q ss_pred HHHHHHHHHHHHHCCCCc-EEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 211 EDLRRVIDYLHCQYPEVP-LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~~~~-i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
+|..+.+..+.+.....+ ++++||||||++++.++.++|+ +++++|++++....
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~ 164 (351)
T TIGR01392 110 RDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPE--RVRAIVVLATSARH 164 (351)
T ss_pred HHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEccCCcC
Confidence 444444444444455567 9999999999999999999998 89999999986543
No 46
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.80 E-value=3.6e-18 Score=173.35 Aligned_cols=253 Identities=15% Similarity=0.118 Sum_probs=146.4
Q ss_pred CCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCC---chhHHHHHHHHHHHhCCceEEEEcCCCCCCCC
Q 008371 122 PDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSD---SAAAYIKHLAFKMAGHGWNVVVSNHRGLGGIS 198 (568)
Q Consensus 122 ~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~---s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~ 198 (568)
.+|.++...++.|.+ ..++.||++||.++. ....+ ..+++.|+++||+|+++|+||||.|+
T Consensus 9 ~~~~~l~g~~~~p~~---------------~~~~~vv~i~gg~~~~~g~~~~~-~~la~~l~~~G~~v~~~Dl~G~G~S~ 72 (274)
T TIGR03100 9 CEGETLVGVLHIPGA---------------SHTTGVLIVVGGPQYRVGSHRQF-VLLARRLAEAGFPVLRFDYRGMGDSE 72 (274)
T ss_pred cCCcEEEEEEEcCCC---------------CCCCeEEEEeCCccccCCchhHH-HHHHHHHHHCCCEEEEeCCCCCCCCC
Confidence 456777766666532 234557777765432 22223 56889999999999999999999987
Q ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHCC-CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHH
Q 008371 199 LTSDCFYNGGWTEDLRRVIDYLHCQYP-EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRL 277 (568)
Q Consensus 199 ~~~~~~~~~~~~~Dl~~vi~~l~~~~~-~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~ 277 (568)
... .....+.+|+.++++++++..+ ..+++++||||||.+++.++... . +|+++|++++++....... . ..
T Consensus 73 ~~~--~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~-~--~v~~lil~~p~~~~~~~~~--~-~~ 144 (274)
T TIGR03100 73 GEN--LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPAD-L--RVAGLVLLNPWVRTEAAQA--A-SR 144 (274)
T ss_pred CCC--CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhC-C--CccEEEEECCccCCcccch--H-HH
Confidence 532 1223466899999999988764 35799999999999999887653 3 6999999988754322110 0 01
Q ss_pred HHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhh-c-ccCCCCCHHHHHHhCCcccccCCCccceEE
Q 008371 278 VQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHAT-R-VLGKFETVDAYYRHSSSANFVRNVSVPLLC 355 (568)
Q Consensus 278 ~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~-~-~~~g~~~~~~yy~~~s~~~~l~~I~vPvLi 355 (568)
....|...+... .+.. ..+....+...+. ..+..... . ........... .......+.++++|+|+
T Consensus 145 ~~~~~~~~~~~~--~~~~---~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~P~ll 212 (274)
T TIGR03100 145 IRHYYLGQLLSA--DFWR---KLLSGEVNLGSSL-----RGLGDALLKARQKGDEVAHGGL--AERMKAGLERFQGPVLF 212 (274)
T ss_pred HHHHHHHHHhCh--HHHH---HhcCCCccHHHHH-----HHHHHHHHhhhhcCCCcccchH--HHHHHHHHHhcCCcEEE
Confidence 111111111110 0000 0011111111110 11111000 0 00000000000 00112345678999999
Q ss_pred EEeCCCCCCCCCC------cchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008371 356 ISTLDDPVCTREA------IPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (568)
Q Consensus 356 I~G~dDpivp~~~------~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~ 413 (568)
++|..|+..+.-. ..+.....+++++++.++++||+...| ..+..+.+.|.+||+
T Consensus 213 ~~g~~D~~~~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e---~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 213 ILSGNDLTAQEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDR---VWREWVAARTTEWLR 273 (274)
T ss_pred EEcCcchhHHHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccH---HHHHHHHHHHHHHHh
Confidence 9999999864211 111111245899999999999976565 345678899999985
No 47
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.79 E-value=1.7e-17 Score=175.55 Aligned_cols=239 Identities=14% Similarity=0.139 Sum_probs=135.8
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCC---CCC-CCcHHHHHHHHHHHHHHCCCCc
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDC---FYN-GGWTEDLRRVIDYLHCQYPEVP 228 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~---~~~-~~~~~Dl~~vi~~l~~~~~~~~ 228 (568)
.+|+|||+||+++ +...| +.++..|.+ +|+|+++|+||||.|+..... .|. ..+++|+.++++.+. ..+
T Consensus 126 ~~~~ivllHG~~~-~~~~w-~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~----~~~ 198 (383)
T PLN03084 126 NNPPVLLIHGFPS-QAYSY-RKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK----SDK 198 (383)
T ss_pred CCCeEEEECCCCC-CHHHH-HHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC----CCC
Confidence 4678999999965 44455 678888865 899999999999999865331 122 334566666666653 358
Q ss_pred EEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhh--hHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhcc--
Q 008371 229 LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLIC--DRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARL-- 304 (568)
Q Consensus 229 i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~-- 304 (568)
++++|||+||++++.++.++|+ +|+++|+++++...... ...+. .+...+....+.... .......+...
T Consensus 199 ~~LvG~s~GG~ia~~~a~~~P~--~v~~lILi~~~~~~~~~~~p~~l~-~~~~~l~~~~~~~~~---~~~~~~~~~~~~~ 272 (383)
T PLN03084 199 VSLVVQGYFSPPVVKYASAHPD--KIKKLILLNPPLTKEHAKLPSTLS-EFSNFLLGEIFSQDP---LRASDKALTSCGP 272 (383)
T ss_pred ceEEEECHHHHHHHHHHHhChH--hhcEEEEECCCCccccccchHHHH-HHHHHHhhhhhhcch---HHHHhhhhcccCc
Confidence 9999999999999999999998 89999999987532110 00000 000000000000000 00000000000
Q ss_pred --CChhhh---hc----cCCH-HHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHH
Q 008371 305 --ADWEGI---TK----SRSI-RDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDEC 374 (568)
Q Consensus 305 --~d~~~i---~~----~~~l-~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~ 374 (568)
...+.. .. .... ..+...... .. .....+...........+|++|+|+|+|++|++++.+.... .+
T Consensus 273 ~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~-~~--~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~-~a 348 (383)
T PLN03084 273 YAMKEDDAMVYRRPYLTSGSSGFALNAISRS-MK--KELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVED-FC 348 (383)
T ss_pred cCCCHHHHHHHhccccCCcchHHHHHHHHHH-hh--cccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHH-HH
Confidence 000000 00 0000 000000000 00 00000000000000114689999999999999998875544 33
Q ss_pred hcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008371 375 RANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (568)
Q Consensus 375 ~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~ 413 (568)
+. .+.++++++++||+.+.| .+..+++.|.+|+.
T Consensus 349 ~~-~~a~l~vIp~aGH~~~~E----~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 349 KS-SQHKLIELPMAGHHVQED----CGEELGGIISGILS 382 (383)
T ss_pred Hh-cCCeEEEECCCCCCcchh----CHHHHHHHHHHHhh
Confidence 33 578999999999999988 45578899998885
No 48
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.79 E-value=4.6e-18 Score=158.80 Aligned_cols=231 Identities=16% Similarity=0.181 Sum_probs=159.4
Q ss_pred CCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEc
Q 008371 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (568)
Q Consensus 111 ~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D 190 (568)
.++|+|..+.++|..++...|... ...+|+++++||..|+... .+...--....-+.+|+.++
T Consensus 51 n~pye~i~l~T~D~vtL~a~~~~~----------------E~S~pTlLyfh~NAGNmGh-r~~i~~~fy~~l~mnv~ivs 113 (300)
T KOG4391|consen 51 NMPYERIELRTRDKVTLDAYLMLS----------------ESSRPTLLYFHANAGNMGH-RLPIARVFYVNLKMNVLIVS 113 (300)
T ss_pred CCCceEEEEEcCcceeEeeeeecc----------------cCCCceEEEEccCCCcccc-hhhHHHHHHHHcCceEEEEE
Confidence 479999999999999998767652 3478999999999886542 22222223455689999999
Q ss_pred CCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhh
Q 008371 191 HRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLI 268 (568)
Q Consensus 191 ~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~--~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~ 268 (568)
+||+|.|++.+. ..|..-|.+++++|+..+. ...++++.|.|+||.+++..+++..+ ++.++++-+.-.....
T Consensus 114 YRGYG~S~Gsps---E~GL~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~--ri~~~ivENTF~SIp~ 188 (300)
T KOG4391|consen 114 YRGYGKSEGSPS---EEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSD--RISAIIVENTFLSIPH 188 (300)
T ss_pred eeccccCCCCcc---ccceeccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchh--heeeeeeechhccchh
Confidence 999999986543 3567789999999998764 46789999999999999999999887 7888887543222211
Q ss_pred hhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCC
Q 008371 269 CDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRN 348 (568)
Q Consensus 269 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~ 348 (568)
..- . .+.. ..+ ++ +..|.. -....+...+.+
T Consensus 189 ~~i----~---~v~p----~~~-k~----------------------i~~lc~---------------kn~~~S~~ki~~ 219 (300)
T KOG4391|consen 189 MAI----P---LVFP----FPM-KY----------------------IPLLCY---------------KNKWLSYRKIGQ 219 (300)
T ss_pred hhh----h---eecc----chh-hH----------------------HHHHHH---------------Hhhhcchhhhcc
Confidence 000 0 0000 000 00 000000 001122345667
Q ss_pred CccceEEEEeCCCCCCCCCCcchH-HHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhhc
Q 008371 349 VSVPLLCISTLDDPVCTREAIPWD-ECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (568)
Q Consensus 349 I~vPvLiI~G~dDpivp~~~~~~~-~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~ 417 (568)
-++|.|+|.|..|.++|+...... ....+.+.++..+|+|.|..-.- .+. +.+++.+||..+..
T Consensus 220 ~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i---~dG--Yfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 220 CRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWI---CDG--YFQAIEDFLAEVVK 284 (300)
T ss_pred ccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEE---ecc--HHHHHHHHHHHhcc
Confidence 789999999999999999765542 33456788999999999987443 234 44999999987654
No 49
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.79 E-value=6.5e-18 Score=179.40 Aligned_cols=253 Identities=16% Similarity=0.117 Sum_probs=135.0
Q ss_pred CCcEEEEeCCCCCCchhH-----------HHHHHHH---HHHhCCceEEEEcCCC-CCCCCCCCC------C-------C
Q 008371 153 KNPIVVVIPGLTSDSAAA-----------YIKHLAF---KMAGHGWNVVVSNHRG-LGGISLTSD------C-------F 204 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~-----------y~~~l~~---~l~~~Gy~Vvv~D~RG-~G~S~~~~~------~-------~ 204 (568)
.+|.||++||+++++... |+..++. .+...+|+|+++|+|| +|+|+..+. . .
T Consensus 47 ~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~ 126 (379)
T PRK00175 47 RSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPV 126 (379)
T ss_pred CCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCc
Confidence 468899999998765431 2355542 4435689999999999 455543221 0 1
Q ss_pred CC-CCcHHHHHHHHHHHHHHCCCCc-EEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHH
Q 008371 205 YN-GGWTEDLRRVIDYLHCQYPEVP-LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCY 282 (568)
Q Consensus 205 ~~-~~~~~Dl~~vi~~l~~~~~~~~-i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~ 282 (568)
|+ ..+.+|+.++++.+ +..+ ++++||||||++++.++.++|+ +|+++|++++..........+.......+.
T Consensus 127 ~~~~~~~~~~~~~l~~l----~~~~~~~lvG~S~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~ 200 (379)
T PRK00175 127 ITIRDWVRAQARLLDAL----GITRLAAVVGGSMGGMQALEWAIDYPD--RVRSALVIASSARLSAQNIAFNEVARQAIL 200 (379)
T ss_pred CCHHHHHHHHHHHHHHh----CCCCceEEEEECHHHHHHHHHHHhChH--hhhEEEEECCCcccCHHHHHHHHHHHHHHH
Confidence 11 23334555555544 4456 5899999999999999999998 899999998765432211100000000000
Q ss_pred -------------------HHHHHHHh--------HhhHHhhhhhhhccCC-hhhhhccCCHHHHHH----hhhccc--C
Q 008371 283 -------------------DRVIAIGL--------RGFAQLHQSTVARLAD-WEGITKSRSIRDFDN----HATRVL--G 328 (568)
Q Consensus 283 -------------------~~~l~~~l--------~~~~~~~~~~~~~~~d-~~~i~~~~~l~~fd~----~~~~~~--~ 328 (568)
........ ................ +. .........+.. ...... .
T Consensus 201 ~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~d~~ 279 (379)
T PRK00175 201 ADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFG-FDVEFQVESYLRYQGDKFVERFDAN 279 (379)
T ss_pred hCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccC-CCccchHHHHHHHHHHHHhhccCch
Confidence 00000000 0000000000000000 00 000000001100 000000 0
Q ss_pred CCCCHHHHHHhC--------CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCC----EEEEEeC-CCCcccccc
Q 008371 329 KFETVDAYYRHS--------SSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEK----IILATTR-HGGHLAFYE 395 (568)
Q Consensus 329 g~~~~~~yy~~~--------s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~----~~l~~~~-~GGH~~f~e 395 (568)
.+......+... +....+.+|++|+|+|+|++|.++|++.... .....++ +++++++ ++||+.++|
T Consensus 280 ~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~-la~~i~~a~~~~~l~~i~~~~GH~~~le 358 (379)
T PRK00175 280 SYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSRE-IVDALLAAGADVSYAEIDSPYGHDAFLL 358 (379)
T ss_pred HHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHH-HHHHHHhcCCCeEEEEeCCCCCchhHhc
Confidence 000000111111 1235678999999999999999999876554 3343444 3777775 899999998
Q ss_pred ccccCcccHHHHHHHHHHHhhc
Q 008371 396 GITAKSLWWVRAVNVFLDALNT 417 (568)
Q Consensus 396 g~~~~~~w~~~~i~eFL~~~~~ 417 (568)
.+..+++.|.+||+....
T Consensus 359 ----~p~~~~~~L~~FL~~~~~ 376 (379)
T PRK00175 359 ----DDPRYGRLVRAFLERAAR 376 (379)
T ss_pred ----CHHHHHHHHHHHHHhhhh
Confidence 455799999999987643
No 50
>PRK05855 short chain dehydrogenase; Validated
Probab=99.78 E-value=8.7e-18 Score=187.64 Aligned_cols=271 Identities=19% Similarity=0.228 Sum_probs=147.1
Q ss_pred EEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCC
Q 008371 117 HLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (568)
Q Consensus 117 ~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~ 196 (568)
+.+...||..+.+.++.+ .++|+|||+||++++ ...| ..+++.| .+||+|+++|+||||.
T Consensus 5 ~~~~~~~g~~l~~~~~g~-----------------~~~~~ivllHG~~~~-~~~w-~~~~~~L-~~~~~Vi~~D~~G~G~ 64 (582)
T PRK05855 5 RTVVSSDGVRLAVYEWGD-----------------PDRPTVVLVHGYPDN-HEVW-DGVAPLL-ADRFRVVAYDVRGAGR 64 (582)
T ss_pred EEEEeeCCEEEEEEEcCC-----------------CCCCeEEEEcCCCch-HHHH-HHHHHHh-hcceEEEEecCCCCCC
Confidence 455667899998876532 236789999999654 3344 6788888 5689999999999999
Q ss_pred CCCCCCC-CC-CCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHh
Q 008371 197 ISLTSDC-FY-NGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFIN 274 (568)
Q Consensus 197 S~~~~~~-~~-~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~ 274 (568)
|+..... .+ ...+.+|+.++++.+. ...+++++||||||.+++.++.+......+..++.++.+... ....+..
T Consensus 65 S~~~~~~~~~~~~~~a~dl~~~i~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~-~~~~~~~ 140 (582)
T PRK05855 65 SSAPKRTAAYTLARLADDFAAVIDAVS---PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLD-HVGFWLR 140 (582)
T ss_pred CCCCCcccccCHHHHHHHHHHHHHHhC---CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchH-HHHHHHh
Confidence 9754322 22 2345677777777653 234699999999999999888774322245556655554321 1111110
Q ss_pred HHH---HHHHHHHHHHHHhHhh-HHh-hhhhhh----ccC---Chhhhhc---cCCHHHHHHhhhcccCCCCCHHHHH--
Q 008371 275 RRL---VQKCYDRVIAIGLRGF-AQL-HQSTVA----RLA---DWEGITK---SRSIRDFDNHATRVLGKFETVDAYY-- 337 (568)
Q Consensus 275 ~~~---~~~~~~~~l~~~l~~~-~~~-~~~~~~----~~~---d~~~i~~---~~~l~~fd~~~~~~~~g~~~~~~yy-- 337 (568)
... ........+....... ... ..+.+. ... .+....+ ............. .........+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 219 (582)
T PRK05855 141 SGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTL-SDGAHGVKLYRAN 219 (582)
T ss_pred hcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhh-ccccchHHHHHhh
Confidence 000 0000000000000000 000 000000 000 0000000 0000000000000 00001111111
Q ss_pred -HhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhh
Q 008371 338 -RHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALN 416 (568)
Q Consensus 338 -~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~ 416 (568)
........+.++++|+|+|+|++|+++|.+.... .....++..+++++ +||+.++| .+..+.+.+.+|++...
T Consensus 220 ~~~~~~~~~~~~~~~P~lii~G~~D~~v~~~~~~~-~~~~~~~~~~~~~~-~gH~~~~e----~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 220 MIRSLSRPRERYTDVPVQLIVPTGDPYVRPALYDD-LSRWVPRLWRREIK-AGHWLPMS----HPQVLAAAVAEFVDAVE 293 (582)
T ss_pred hhhhhccCccCCccCceEEEEeCCCcccCHHHhcc-ccccCCcceEEEcc-CCCcchhh----ChhHHHHHHHHHHHhcc
Confidence 1111122355689999999999999999876554 34445677777775 79999988 45578999999999865
Q ss_pred cC
Q 008371 417 TS 418 (568)
Q Consensus 417 ~~ 418 (568)
..
T Consensus 294 ~~ 295 (582)
T PRK05855 294 GG 295 (582)
T ss_pred CC
Confidence 43
No 51
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.78 E-value=1.1e-17 Score=176.50 Aligned_cols=238 Identities=15% Similarity=0.100 Sum_probs=134.2
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEE
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYA 231 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~l 231 (568)
+..|+||++||++++.. .| ..++..|.+ +|+|+++|+||||.|...... ...+++.+.+..+.+..+..++++
T Consensus 129 ~~~~~vl~~HG~~~~~~-~~-~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l 201 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLN-NW-LFNHAALAA-GRPVIALDLPGHGASSKAVGA----GSLDELAAAVLAFLDALGIERAHL 201 (371)
T ss_pred CCCCeEEEECCCCCccc-hH-HHHHHHHhc-CCEEEEEcCCCCCCCCCCCCC----CCHHHHHHHHHHHHHhcCCccEEE
Confidence 34678999999976544 44 467777765 599999999999998643221 223455555555555566668999
Q ss_pred EEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhh
Q 008371 232 VGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGIT 311 (568)
Q Consensus 232 vG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~ 311 (568)
+||||||.+++.++..++. ++.++|+++++.............+........+...+...... ...+.. .......
T Consensus 202 vG~S~Gg~~a~~~a~~~~~--~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~ 277 (371)
T PRK14875 202 VGHSMGGAVALRLAARAPQ--RVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFAD-PALVTR-QMVEDLL 277 (371)
T ss_pred EeechHHHHHHHHHHhCch--heeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcC-hhhCCH-HHHHHHH
Confidence 9999999999999999887 79999999875432211110000000000000000000000000 000000 0000000
Q ss_pred ---ccCCHHHHHHhhhcc-cCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCC
Q 008371 312 ---KSRSIRDFDNHATRV-LGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRH 387 (568)
Q Consensus 312 ---~~~~l~~fd~~~~~~-~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~ 387 (568)
...........+... ...... ..+....+.++++|+|+++|++|.++|.+... ...+++.+.++++
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~----~l~~~~~~~~~~~ 347 (371)
T PRK14875 278 KYKRLDGVDDALRALADALFAGGRQ------RVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQ----GLPDGVAVHVLPG 347 (371)
T ss_pred HHhccccHHHHHHHHHHHhccCccc------chhHHHHHhcCCCCEEEEEECCCCccCHHHHh----hccCCCeEEEeCC
Confidence 000000000000000 000000 01122356789999999999999999865432 2345789999999
Q ss_pred CCccccccccccCcccHHHHHHHHHHH
Q 008371 388 GGHLAFYEGITAKSLWWVRAVNVFLDA 414 (568)
Q Consensus 388 GGH~~f~eg~~~~~~w~~~~i~eFL~~ 414 (568)
+||+.+++ .+.++.+.|.+||+.
T Consensus 348 ~gH~~~~e----~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 348 AGHMPQME----AAADVNRLLAEFLGK 370 (371)
T ss_pred CCCChhhh----CHHHHHHHHHHHhcc
Confidence 99999988 456788888888864
No 52
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.76 E-value=1.4e-17 Score=168.86 Aligned_cols=241 Identities=15% Similarity=0.147 Sum_probs=132.3
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEE
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYA 231 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~l 231 (568)
..+|+|||+||+.++. ..| ..++..|.++||+|+++|+||||.|....... .++.++...+.+.+.......++++
T Consensus 16 ~~~p~vvliHG~~~~~-~~w-~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~--~~~~~~~~~l~~~i~~l~~~~~v~l 91 (273)
T PLN02211 16 RQPPHFVLIHGISGGS-WCW-YKIRCLMENSGYKVTCIDLKSAGIDQSDADSV--TTFDEYNKPLIDFLSSLPENEKVIL 91 (273)
T ss_pred CCCCeEEEECCCCCCc-CcH-HHHHHHHHhCCCEEEEecccCCCCCCCCcccC--CCHHHHHHHHHHHHHhcCCCCCEEE
Confidence 4578999999997644 344 67888998889999999999999875332221 2333444555555544323468999
Q ss_pred EEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHh-hh--hh---hhccC
Q 008371 232 VGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQL-HQ--ST---VARLA 305 (568)
Q Consensus 232 vG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~--~~---~~~~~ 305 (568)
|||||||.++..++..+++ +|+++|++++.......... . .+... +.... .+...... .. .. .....
T Consensus 92 vGhS~GG~v~~~~a~~~p~--~v~~lv~~~~~~~~~g~~~~-~-~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 164 (273)
T PLN02211 92 VGHSAGGLSVTQAIHRFPK--KICLAVYVAATMLKLGFQTD-E-DMKDG-VPDLS--EFGDVYELGFGLGPDQPPTSAII 164 (273)
T ss_pred EEECchHHHHHHHHHhChh--heeEEEEeccccCCCCCCHH-H-HHhcc-ccchh--hhccceeeeeccCCCCCCceeee
Confidence 9999999999999998887 79999999763211000000 0 00000 00000 00000000 00 00 00000
Q ss_pred Chh---hh-hccCCHH--HHHHhhhcccCCCCCHHHHHHhCCcccccCCC-ccceEEEEeCCCCCCCCCCcchHHHhcCC
Q 008371 306 DWE---GI-TKSRSIR--DFDNHATRVLGKFETVDAYYRHSSSANFVRNV-SVPLLCISTLDDPVCTREAIPWDECRANE 378 (568)
Q Consensus 306 d~~---~i-~~~~~l~--~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I-~vPvLiI~G~dDpivp~~~~~~~~~~~~~ 378 (568)
..+ .+ ....... .+-...... ...... ..........++ ++|+++|.|++|.++|++..+. ..+..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~-m~~~~~ 238 (273)
T PLN02211 165 KKEFRRKILYQMSPQEDSTLAAMLLRP-GPILAL----RSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEA-MIKRWP 238 (273)
T ss_pred CHHHHHHHHhcCCCHHHHHHHHHhcCC-cCcccc----ccccccccccccCccceEEEEeCCCCCCCHHHHHH-HHHhCC
Confidence 000 00 0000000 000000000 000000 000011123355 8899999999999999886555 455567
Q ss_pred CEEEEEeCCCCccccccccccCcccHHHHHHHHHHH
Q 008371 379 KIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (568)
Q Consensus 379 ~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~ 414 (568)
..+++.++ +||..|++ .+..+.+.|.++...
T Consensus 239 ~~~~~~l~-~gH~p~ls----~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 239 PSQVYELE-SDHSPFFS----TPFLLFGLLIKAAAS 269 (273)
T ss_pred ccEEEEEC-CCCCcccc----CHHHHHHHHHHHHHH
Confidence 77888886 89999998 455566777666554
No 53
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.75 E-value=1.4e-17 Score=174.94 Aligned_cols=107 Identities=11% Similarity=0.154 Sum_probs=86.0
Q ss_pred CcEEEEeCCCCCCchhHHH------HHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcH-HHHHHHHHHHHHHCCC
Q 008371 154 NPIVVVIPGLTSDSAAAYI------KHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWT-EDLRRVIDYLHCQYPE 226 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~------~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-~Dl~~vi~~l~~~~~~ 226 (568)
+++||++||+.. + .|+ +.+++.|+++||+|+++|+||+|.++... ....+. +|+.+++++++++.+.
T Consensus 62 ~~pvl~v~~~~~-~--~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~---~~~d~~~~~~~~~v~~l~~~~~~ 135 (350)
T TIGR01836 62 KTPLLIVYALVN-R--PYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYL---TLDDYINGYIDKCVDYICRTSKL 135 (350)
T ss_pred CCcEEEeccccc-c--ceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcC---CHHHHHHHHHHHHHHHHHHHhCC
Confidence 344899999843 2 222 47999999999999999999998765321 112233 4689999999999888
Q ss_pred CcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhh
Q 008371 227 VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLI 268 (568)
Q Consensus 227 ~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~ 268 (568)
.+++++||||||.+++.|++.+++ +++++|++++|.++..
T Consensus 136 ~~i~lvGhS~GG~i~~~~~~~~~~--~v~~lv~~~~p~~~~~ 175 (350)
T TIGR01836 136 DQISLLGICQGGTFSLCYAALYPD--KIKNLVTMVTPVDFET 175 (350)
T ss_pred CcccEEEECHHHHHHHHHHHhCch--heeeEEEeccccccCC
Confidence 899999999999999999999887 7999999999988643
No 54
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.73 E-value=1.5e-17 Score=161.81 Aligned_cols=207 Identities=20% Similarity=0.243 Sum_probs=124.3
Q ss_pred ceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCC
Q 008371 184 WNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (568)
Q Consensus 184 y~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p 263 (568)
|+|+++|+||+|.|+............+|+.+.++.+.++.+..+++++||||||++++.|+.++|+ +|+++|+++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~--~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPE--RVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGG--GEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCch--hhcCcEEEeee
Confidence 7899999999999983101222233468999999999999888889999999999999999999999 89999999886
Q ss_pred C--ChhhhhHHHhH-HHHHHHHHHH---HHHHhHhhHHhhhhh---hhc--cCChhhhhccCCHHHHHHh-hhccc-CCC
Q 008371 264 W--DLLICDRFINR-RLVQKCYDRV---IAIGLRGFAQLHQST---VAR--LADWEGITKSRSIRDFDNH-ATRVL-GKF 330 (568)
Q Consensus 264 ~--d~~~~~~~~~~-~~~~~~~~~~---l~~~l~~~~~~~~~~---~~~--~~d~~~i~~~~~l~~fd~~-~~~~~-~g~ 330 (568)
. ........... .......... ............... ... ..+...... ....... ..... ..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 155 (230)
T PF00561_consen 79 PDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQ---SQQYARFAETDAFDNMF 155 (230)
T ss_dssp SHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHH---HHHHHHTCHHHHHHHHH
T ss_pred ccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccc---hhhhhHHHHHHHHhhhc
Confidence 3 11111111111 0000000000 000000000000000 000 000000000 0000000 00000 000
Q ss_pred CCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccc
Q 008371 331 ETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEG 396 (568)
Q Consensus 331 ~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg 396 (568)
.....++...+....+.+|++|+|+++|++|+++|++.... ..+..|+.++++++++||..++++
T Consensus 156 ~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~-~~~~~~~~~~~~~~~~GH~~~~~~ 220 (230)
T PF00561_consen 156 WNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQ-LAKLIPNSQLVLIEGSGHFAFLEG 220 (230)
T ss_dssp HHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHH-HHHHSTTEEEEEETTCCSTHHHHS
T ss_pred cccccccccccccccccccCCCeEEEEeCCCCCCCHHHHHH-HHHhcCCCEEEECCCCChHHHhcC
Confidence 02334455555567788999999999999999999887665 677889999999999999999984
No 55
>PRK10566 esterase; Provisional
Probab=99.72 E-value=1.1e-16 Score=159.38 Aligned_cols=209 Identities=13% Similarity=0.091 Sum_probs=126.4
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCC-------CcHHHHHHHHHHHHHHC
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNG-------GWTEDLRRVIDYLHCQY 224 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~-------~~~~Dl~~vi~~l~~~~ 224 (568)
++.|+||++||++++ ...| ..++..|+++||+|+++|+||+|.+....+..... ...+|+.++++++.++.
T Consensus 25 ~~~p~vv~~HG~~~~-~~~~-~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 102 (249)
T PRK10566 25 TPLPTVFFYHGFTSS-KLVY-SYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEG 102 (249)
T ss_pred CCCCEEEEeCCCCcc-cchH-HHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 457999999999764 3344 67899999999999999999999753211111001 12467888888887663
Q ss_pred --CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhh
Q 008371 225 --PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVA 302 (568)
Q Consensus 225 --~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 302 (568)
+..+++++||||||.+++.++...++ +++.+.+..+..... +....+. +...
T Consensus 103 ~~~~~~i~v~G~S~Gg~~al~~~~~~~~---~~~~~~~~~~~~~~~------------~~~~~~~-----------~~~~ 156 (249)
T PRK10566 103 WLLDDRLAVGGASMGGMTALGIMARHPW---VKCVASLMGSGYFTS------------LARTLFP-----------PLIP 156 (249)
T ss_pred CcCccceeEEeecccHHHHHHHHHhCCC---eeEEEEeeCcHHHHH------------HHHHhcc-----------cccc
Confidence 35689999999999999998888765 665554433211100 0000000 0000
Q ss_pred ccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCC-ccceEEEEeCCCCCCCCCCcchHHH--hcC--
Q 008371 303 RLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNV-SVPLLCISTLDDPVCTREAIPWDEC--RAN-- 377 (568)
Q Consensus 303 ~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I-~vPvLiI~G~dDpivp~~~~~~~~~--~~~-- 377 (568)
.. ......+..... .....+....+.++ ++|+|+++|++|+++|.+....... ...
T Consensus 157 ~~--------~~~~~~~~~~~~-----------~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~ 217 (249)
T PRK10566 157 ET--------AAQQAEFNNIVA-----------PLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGL 217 (249)
T ss_pred cc--------cccHHHHHHHHH-----------HHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCC
Confidence 00 000111111110 01111223345666 7999999999999999875543221 111
Q ss_pred -CCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHh
Q 008371 378 -EKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (568)
Q Consensus 378 -~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~ 415 (568)
.++++..++++||... + -..+.+.+||++.
T Consensus 218 ~~~~~~~~~~~~~H~~~-----~---~~~~~~~~fl~~~ 248 (249)
T PRK10566 218 DKNLTCLWEPGVRHRIT-----P---EALDAGVAFFRQH 248 (249)
T ss_pred CcceEEEecCCCCCccC-----H---HHHHHHHHHHHhh
Confidence 2478889999999632 1 1458899999853
No 56
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.71 E-value=5.2e-16 Score=150.53 Aligned_cols=215 Identities=18% Similarity=0.177 Sum_probs=149.1
Q ss_pred EEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHh-CCceEEEEcCCCCCC
Q 008371 118 LFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAG-HGWNVVVSNHRGLGG 196 (568)
Q Consensus 118 ~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~-~Gy~Vvv~D~RG~G~ 196 (568)
..+++-|..+..-.+.++. ...++++++||...+-.... .+...+.. -+++++.+|++|+|.
T Consensus 39 ~~~t~rgn~~~~~y~~~~~---------------~~~~~lly~hGNa~Dlgq~~--~~~~~l~~~ln~nv~~~DYSGyG~ 101 (258)
T KOG1552|consen 39 KVKTSRGNEIVCMYVRPPE---------------AAHPTLLYSHGNAADLGQMV--ELFKELSIFLNCNVVSYDYSGYGR 101 (258)
T ss_pred EeecCCCCEEEEEEEcCcc---------------ccceEEEEcCCcccchHHHH--HHHHHHhhcccceEEEEecccccc
Confidence 4556667776655555432 34689999999865544322 33334433 379999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHHHHC-CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhH
Q 008371 197 ISLTSDCFYNGGWTEDLRRVIDYLHCQY-PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINR 275 (568)
Q Consensus 197 S~~~~~~~~~~~~~~Dl~~vi~~l~~~~-~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~ 275 (568)
|.++.... +..+|+.++.++++.++ +.++++++|+|||+..++.+|++.+ ++++|+.+|-.+..+.
T Consensus 102 S~G~psE~---n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~----~~alVL~SPf~S~~rv------ 168 (258)
T KOG1552|consen 102 SSGKPSER---NLYADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP----LAAVVLHSPFTSGMRV------ 168 (258)
T ss_pred cCCCcccc---cchhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC----cceEEEeccchhhhhh------
Confidence 99775443 56799999999999999 5789999999999999999999875 7899988664332110
Q ss_pred HHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEE
Q 008371 276 RLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLC 355 (568)
Q Consensus 276 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLi 355 (568)
+++ + . .++ ..|| .....+.+..|++|+|+
T Consensus 169 -----~~~-------------~--~------------~~~-~~~d------------------~f~~i~kI~~i~~PVLi 197 (258)
T KOG1552|consen 169 -----AFP-------------D--T------------KTT-YCFD------------------AFPNIEKISKITCPVLI 197 (258)
T ss_pred -----hcc-------------C--c------------ceE-Eeec------------------cccccCcceeccCCEEE
Confidence 000 0 0 000 0000 01115678899999999
Q ss_pred EEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhhcC
Q 008371 356 ISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTS 418 (568)
Q Consensus 356 I~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~~ 418 (568)
+||.+|++++.......-.......+-.++.++||+.... ...+.+.+.+|+..+...
T Consensus 198 iHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~-----~~~yi~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 198 IHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIEL-----YPEYIEHLRRFISSVLPS 255 (258)
T ss_pred EecccCceecccccHHHHHhccccCCCcEEecCCCccccc-----CHHHHHHHHHHHHHhccc
Confidence 9999999999987665333333445777888999986433 124778999999887653
No 57
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.69 E-value=2.5e-15 Score=184.37 Aligned_cols=246 Identities=17% Similarity=0.144 Sum_probs=135.5
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCC-C---CCCCcHHHHHHHHHHHHHHCCCCc
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDC-F---YNGGWTEDLRRVIDYLHCQYPEVP 228 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~-~---~~~~~~~Dl~~vi~~l~~~~~~~~ 228 (568)
.+|+|||+||+++++. .| ..++..|.+ +|+|+++|+||||.|+..... . ......+++.+.+..+.++....+
T Consensus 1370 ~~~~vVllHG~~~s~~-~w-~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~ 1446 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGE-DW-IPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGK 1446 (1655)
T ss_pred CCCeEEEECCCCCCHH-HH-HHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCC
Confidence 4678999999977554 45 678888865 699999999999998754210 0 001123343333333333334568
Q ss_pred EEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHH-HHHHHHHHHHHhHhhHHhh-hhhh-hccC
Q 008371 229 LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLV-QKCYDRVIAIGLRGFAQLH-QSTV-ARLA 305 (568)
Q Consensus 229 i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~-~~~~-~~~~ 305 (568)
++++||||||.+++.++.++|+ +|+++|++++............+... ...........+..+.... ...+ ....
T Consensus 1447 v~LvGhSmGG~iAl~~A~~~P~--~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~ 1524 (1655)
T PLN02980 1447 VTLVGYSMGARIALYMALRFSD--KIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLR 1524 (1655)
T ss_pred EEEEEECHHHHHHHHHHHhChH--hhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhc
Confidence 9999999999999999999998 89999999864322111000000000 0000000000011110000 0000 0000
Q ss_pred C---hhhh----hccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCC
Q 008371 306 D---WEGI----TKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANE 378 (568)
Q Consensus 306 d---~~~i----~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~ 378 (568)
. .... ........+...+.... .....+....+.+|++|+|+|+|++|++++ +.... ..+..+
T Consensus 1525 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~-~~~~i~ 1594 (1655)
T PLN02980 1525 NHPHFNKIVASRLLHKDVPSLAKLLSDLS--------IGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQK-MYREIG 1594 (1655)
T ss_pred cCHHHHHHHHHHHhcCCHHHHHHHHHHhh--------hcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHH-HHHHcc
Confidence 0 0000 00000111110000000 000111224578999999999999999875 32222 222222
Q ss_pred ------------CEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhhc
Q 008371 379 ------------KIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (568)
Q Consensus 379 ------------~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~ 417 (568)
.+++++++++||+.++| .+..+.+.|.+||+....
T Consensus 1595 ~a~~~~~~~~~~~a~lvvI~~aGH~~~lE----~Pe~f~~~I~~FL~~~~~ 1641 (1655)
T PLN02980 1595 KSKESGNDKGKEIIEIVEIPNCGHAVHLE----NPLPVIRALRKFLTRLHN 1641 (1655)
T ss_pred ccccccccccccceEEEEECCCCCchHHH----CHHHHHHHHHHHHHhccc
Confidence 36899999999999998 566799999999998653
No 58
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.68 E-value=7.9e-16 Score=139.65 Aligned_cols=144 Identities=20% Similarity=0.276 Sum_probs=111.2
Q ss_pred EEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH-CCCCcEEEEEe
Q 008371 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ-YPEVPLYAVGT 234 (568)
Q Consensus 156 vVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~-~~~~~i~lvG~ 234 (568)
+||++||++++ ...| ..+++.++++||.|+++|+||+|.+.. .+++.++++.+.+. .+..+++++||
T Consensus 1 ~vv~~HG~~~~-~~~~-~~~~~~l~~~G~~v~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~i~l~G~ 68 (145)
T PF12695_consen 1 VVVLLHGWGGS-RRDY-QPLAEALAEQGYAVVAFDYPGHGDSDG----------ADAVERVLADIRAGYPDPDRIILIGH 68 (145)
T ss_dssp EEEEECTTTTT-THHH-HHHHHHHHHTTEEEEEESCTTSTTSHH----------SHHHHHHHHHHHHHHCTCCEEEEEEE
T ss_pred CEEEECCCCCC-HHHH-HHHHHHHHHCCCEEEEEecCCCCccch----------hHHHHHHHHHHHhhcCCCCcEEEEEE
Confidence 48999999765 4455 689999999999999999999998732 25788888887443 35579999999
Q ss_pred cHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccC
Q 008371 235 SIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSR 314 (568)
Q Consensus 235 SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~ 314 (568)
|+||.+++.++.+. . +++++|++++..+
T Consensus 69 S~Gg~~a~~~~~~~-~--~v~~~v~~~~~~~------------------------------------------------- 96 (145)
T PF12695_consen 69 SMGGAIAANLAARN-P--RVKAVVLLSPYPD------------------------------------------------- 96 (145)
T ss_dssp THHHHHHHHHHHHS-T--TESEEEEESESSG-------------------------------------------------
T ss_pred ccCcHHHHHHhhhc-c--ceeEEEEecCccc-------------------------------------------------
Confidence 99999999999988 4 6999999977210
Q ss_pred CHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcc
Q 008371 315 SIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHL 391 (568)
Q Consensus 315 ~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~ 391 (568)
...+.+.++|+++++|++|++++.+...........+.++..+++++|+
T Consensus 97 ----------------------------~~~~~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 97 ----------------------------SEDLAKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp ----------------------------CHHHTTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred ----------------------------hhhhhccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0112345569999999999999887665544444578999999999995
No 59
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.68 E-value=2.3e-16 Score=158.26 Aligned_cols=244 Identities=14% Similarity=0.150 Sum_probs=149.4
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhC-CceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcE
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGH-GWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPL 229 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i 229 (568)
....|.++++||+.|+. ..| +.+...|+.. |-.|++.|.|.||.|+......| ...++|+..+++..+..+...++
T Consensus 49 ~~~~Pp~i~lHGl~GS~-~Nw-~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~-~~ma~dv~~Fi~~v~~~~~~~~~ 125 (315)
T KOG2382|consen 49 LERAPPAIILHGLLGSK-ENW-RSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNY-EAMAEDVKLFIDGVGGSTRLDPV 125 (315)
T ss_pred cCCCCceEEecccccCC-CCH-HHHHHHhcccccCceEEEecccCCCCccccccCH-HHHHHHHHHHHHHcccccccCCc
Confidence 35678899999998854 566 7888888765 77999999999999987665554 34678999999988765556799
Q ss_pred EEEEecHHH-HHHHHHHHhcCCCCCceEEEEEcCCCC-hhhhhHHHhHHHHHHHHHHHHHHHhH----hhHHhhhhhhhc
Q 008371 230 YAVGTSIGA-NILVKYLGENGVNTPLVGAAAICSPWD-LLICDRFINRRLVQKCYDRVIAIGLR----GFAQLHQSTVAR 303 (568)
Q Consensus 230 ~lvG~SmGG-~ial~ya~~~~~~~~I~a~V~is~p~d-~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~~~~ 303 (568)
+++|||||| .+++.+....|. .+..+|++..... ..... .. ...++..+....+. .-.+...+.+..
T Consensus 126 ~l~GHsmGG~~~~m~~t~~~p~--~~~rliv~D~sP~~~~~~~-~e----~~e~i~~m~~~d~~~~~~~~rke~~~~l~~ 198 (315)
T KOG2382|consen 126 VLLGHSMGGVKVAMAETLKKPD--LIERLIVEDISPGGVGRSY-GE----YRELIKAMIQLDLSIGVSRGRKEALKSLIE 198 (315)
T ss_pred eecccCcchHHHHHHHHHhcCc--ccceeEEEecCCccCCccc-ch----HHHHHHHHHhccccccccccHHHHHHHHHH
Confidence 999999999 556666666776 6777777764331 11110 00 01111111111100 000000000000
Q ss_pred cCChhhhhccCCHHHHHHhhhc--ccC-------CCCCHHHHHH---hCCccccc--CCCccceEEEEeCCCCCCCCCCc
Q 008371 304 LADWEGITKSRSIRDFDNHATR--VLG-------KFETVDAYYR---HSSSANFV--RNVSVPLLCISTLDDPVCTREAI 369 (568)
Q Consensus 304 ~~d~~~i~~~~~l~~fd~~~~~--~~~-------g~~~~~~yy~---~~s~~~~l--~~I~vPvLiI~G~dDpivp~~~~ 369 (568)
......+.+|-..-.. ... ...++.+.+. ..+....+ ..-..|+|++.|.++++++.+..
T Consensus 199 ------~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~ 272 (315)
T KOG2382|consen 199 ------VGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHY 272 (315)
T ss_pred ------HhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHH
Confidence 0001111111110000 000 0011122221 22222223 56689999999999999999887
Q ss_pred chHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHh
Q 008371 370 PWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (568)
Q Consensus 370 ~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~ 415 (568)
+. ..+..|++++..++++||+.+.| +|..+.+.|.+|++..
T Consensus 273 ~~-~~~~fp~~e~~~ld~aGHwVh~E----~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 273 PR-MEKIFPNVEVHELDEAGHWVHLE----KPEEFIESISEFLEEP 313 (315)
T ss_pred HH-HHHhccchheeecccCCceeecC----CHHHHHHHHHHHhccc
Confidence 76 56778899999999999999999 5666889999998754
No 60
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.67 E-value=1.2e-16 Score=147.81 Aligned_cols=228 Identities=12% Similarity=0.098 Sum_probs=149.9
Q ss_pred EEEEeCCCCCCchhHHHHHHHHHHHhC-CceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEe
Q 008371 156 IVVVIPGLTSDSAAAYIKHLAFKMAGH-GWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (568)
Q Consensus 156 vVVllHGl~G~s~~~y~~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~ 234 (568)
.|++++|..|++...| ......+.+. -++++++|.||+|.|..+...+-...+.+|...+++.++.. .-.++.++|+
T Consensus 44 ~iLlipGalGs~~tDf-~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL-k~~~fsvlGW 121 (277)
T KOG2984|consen 44 YILLIPGALGSYKTDF-PPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL-KLEPFSVLGW 121 (277)
T ss_pred eeEecccccccccccC-CHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh-CCCCeeEeee
Confidence 4899999999877666 4444444333 38999999999999986654443344557888888776543 4568999999
Q ss_pred cHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccC
Q 008371 235 SIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSR 314 (568)
Q Consensus 235 SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~ 314 (568)
|=||..++..|+++++ .|..+|+.++..-.........+.. + -.+++....-+.+.. ....+.+ .+
T Consensus 122 SdGgiTalivAak~~e--~v~rmiiwga~ayvn~~~~ma~kgi-R-dv~kWs~r~R~P~e~--------~Yg~e~f--~~ 187 (277)
T KOG2984|consen 122 SDGGITALIVAAKGKE--KVNRMIIWGAAAYVNHLGAMAFKGI-R-DVNKWSARGRQPYED--------HYGPETF--RT 187 (277)
T ss_pred cCCCeEEEEeeccChh--hhhhheeecccceecchhHHHHhch-H-HHhhhhhhhcchHHH--------hcCHHHH--HH
Confidence 9999999999999998 7988888876543322211111110 0 001111111111111 1111111 11
Q ss_pred CHHHHHHhhhcccCCCCCHHHHHHhC---CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcc
Q 008371 315 SIRDFDNHATRVLGKFETVDAYYRHS---SSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHL 391 (568)
Q Consensus 315 ~l~~fd~~~~~~~~g~~~~~~yy~~~---s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~ 391 (568)
...+|.+.+ ..++..+ -|...+++|+||+|++||+.||+|+...+.+ .....+..++.+.+.|+|.
T Consensus 188 ~wa~wvD~v----------~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~f-i~~~~~~a~~~~~peGkHn 256 (277)
T KOG2984|consen 188 QWAAWVDVV----------DQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCF-IPVLKSLAKVEIHPEGKHN 256 (277)
T ss_pred HHHHHHHHH----------HHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccc-hhhhcccceEEEccCCCcc
Confidence 122232222 1112111 1566789999999999999999999998887 4566788999999999999
Q ss_pred ccccccccCcccHHHHHHHHHHH
Q 008371 392 AFYEGITAKSLWWVRAVNVFLDA 414 (568)
Q Consensus 392 ~f~eg~~~~~~w~~~~i~eFL~~ 414 (568)
.++. -..|+++.+.+||++
T Consensus 257 ~hLr----ya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 257 FHLR----YAKEFNKLVLDFLKS 275 (277)
T ss_pred eeee----chHHHHHHHHHHHhc
Confidence 8886 445899999999985
No 61
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.65 E-value=5.3e-15 Score=166.42 Aligned_cols=246 Identities=18% Similarity=0.122 Sum_probs=165.8
Q ss_pred CCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEc
Q 008371 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (568)
Q Consensus 111 ~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D 190 (568)
..+.+...+...||.++....+.|.+.+ ...+-|+||++||.+............+.++.+||.|+.+|
T Consensus 362 ~~~~e~~~~~~~dG~~i~~~l~~P~~~~-----------~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n 430 (620)
T COG1506 362 LAEPEPVTYKSNDGETIHGWLYKPPGFD-----------PRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPN 430 (620)
T ss_pred cCCceEEEEEcCCCCEEEEEEecCCCCC-----------CCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeC
Confidence 4566788899999999999777775521 11235999999997543333233567888999999999999
Q ss_pred CCCCCCCCCC----CCCCCCCCcHHHHHHHHHHHHHHCC---CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCC
Q 008371 191 HRGLGGISLT----SDCFYNGGWTEDLRRVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (568)
Q Consensus 191 ~RG~G~S~~~----~~~~~~~~~~~Dl~~vi~~l~~~~~---~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p 263 (568)
+||.++-... ....+.....+|+.++++++.+ .| ..+++++|+|+||.+++..+...+. ++++++..++
T Consensus 431 ~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~-~~~~d~~ri~i~G~SyGGymtl~~~~~~~~---f~a~~~~~~~ 506 (620)
T COG1506 431 YRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVK-LPLVDPERIGITGGSYGGYMTLLAATKTPR---FKAAVAVAGG 506 (620)
T ss_pred CCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHh-CCCcChHHeEEeccChHHHHHHHHHhcCch---hheEEeccCc
Confidence 9996652110 1123334567999999996644 44 3479999999999999999988874 8888887765
Q ss_pred CChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcc
Q 008371 264 WDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSA 343 (568)
Q Consensus 264 ~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~ 343 (568)
.+......... ..+ ...+ +.... +.....++|...|+.
T Consensus 507 ~~~~~~~~~~~------------------------~~~--~~~~------------~~~~~----~~~~~~~~~~~~sp~ 544 (620)
T COG1506 507 VDWLLYFGEST------------------------EGL--RFDP------------EENGG----GPPEDREKYEDRSPI 544 (620)
T ss_pred chhhhhccccc------------------------hhh--cCCH------------HHhCC----CcccChHHHHhcChh
Confidence 54321100000 000 0000 00000 000034678888999
Q ss_pred cccCCCccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhh
Q 008371 344 NFVRNVSVPLLCISTLDDPVCTREAIPW---DECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALN 416 (568)
Q Consensus 344 ~~l~~I~vPvLiI~G~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~ 416 (568)
...++|++|+|+|||++|..||.+.... .+.....+++++++|+.||-.--. .+..-+.+.+.+|+++.+
T Consensus 545 ~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~---~~~~~~~~~~~~~~~~~~ 617 (620)
T COG1506 545 FYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRP---ENRVKVLKEILDWFKRHL 617 (620)
T ss_pred hhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCc---hhHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999885543 234567889999999999954321 122335577888887654
No 62
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.65 E-value=8.5e-15 Score=155.31 Aligned_cols=256 Identities=13% Similarity=0.048 Sum_probs=137.4
Q ss_pred CCCcEEEEeCCCCCCchh-----------HHHHHHHHH---HHhCCceEEEEcCCCCCCC-------CCC------CCCC
Q 008371 152 EKNPIVVVIPGLTSDSAA-----------AYIKHLAFK---MAGHGWNVVVSNHRGLGGI-------SLT------SDCF 204 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~-----------~y~~~l~~~---l~~~Gy~Vvv~D~RG~G~S-------~~~------~~~~ 204 (568)
.+.++||++|+++|+++. .|+..++-. +-...|-|+++|..|-|.| .++ +...
T Consensus 54 ~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~ 133 (389)
T PRK06765 54 AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKP 133 (389)
T ss_pred CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCc
Confidence 456899999999986532 233444321 3234699999999996542 111 0111
Q ss_pred C----CCCcHHHHHHHHHHHHHHCCCCcEE-EEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhh-HHHhHHHH
Q 008371 205 Y----NGGWTEDLRRVIDYLHCQYPEVPLY-AVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICD-RFINRRLV 278 (568)
Q Consensus 205 ~----~~~~~~Dl~~vi~~l~~~~~~~~i~-lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~-~~~~~~~~ 278 (568)
+ -.-..+|+.+.+..+.+..+..++. ++||||||++++.++.++|+ +++++|++++........ ..+.....
T Consensus 134 ~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~--~v~~lv~ia~~~~~~~~~~~~~~~~~~ 211 (389)
T PRK06765 134 YGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPH--MVERMIGVIGNPQNDAWTSVNVLQNWA 211 (389)
T ss_pred cCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChH--hhheEEEEecCCCCChhHHHHHHHHHH
Confidence 1 1122456666555555666667776 99999999999999999999 899999998755432211 11111000
Q ss_pred HHHHH----------------HHH--HHHh--Hhh--HHhhhhhhhccC--Chh---hhhccCCHHHHHHhhhcccCCCC
Q 008371 279 QKCYD----------------RVI--AIGL--RGF--AQLHQSTVARLA--DWE---GITKSRSIRDFDNHATRVLGKFE 331 (568)
Q Consensus 279 ~~~~~----------------~~l--~~~l--~~~--~~~~~~~~~~~~--d~~---~i~~~~~l~~fd~~~~~~~~g~~ 331 (568)
..+.. .-+ ...+ ..+ .......+.+.. ... .......+..+-+....+.....
T Consensus 212 ~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~ 291 (389)
T PRK06765 212 EAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELV 291 (389)
T ss_pred HHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhcc
Confidence 00000 000 0000 000 000000000000 000 00000011111111111100111
Q ss_pred CHHHHH------HhC-------CcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcC----CCEEEEEeCC-CCcccc
Q 008371 332 TVDAYY------RHS-------SSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRAN----EKIILATTRH-GGHLAF 393 (568)
Q Consensus 332 ~~~~yy------~~~-------s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~----~~~~l~~~~~-GGH~~f 393 (568)
+...|. ... +....+.+|++|+|+|+|++|.++|++.... ..+.. ++++++++++ .||+.+
T Consensus 292 Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~-la~~lp~~~~~a~l~~I~s~~GH~~~ 370 (389)
T PRK06765 292 DANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYK-MVDILQKQGKYAEVYEIESINGHMAG 370 (389)
T ss_pred ChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHH-HHHHhhhcCCCeEEEEECCCCCcchh
Confidence 111111 011 2234677899999999999999999875544 23323 4799999985 899999
Q ss_pred ccccccCcccHHHHHHHHHHH
Q 008371 394 YEGITAKSLWWVRAVNVFLDA 414 (568)
Q Consensus 394 ~eg~~~~~~w~~~~i~eFL~~ 414 (568)
+| .+..+.+.|.+||++
T Consensus 371 le----~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 371 VF----DIHLFEKKIYEFLNR 387 (389)
T ss_pred hc----CHHHHHHHHHHHHcc
Confidence 98 555788999999864
No 63
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.64 E-value=5.8e-15 Score=153.95 Aligned_cols=240 Identities=19% Similarity=0.164 Sum_probs=139.4
Q ss_pred CCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcC
Q 008371 112 ISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (568)
Q Consensus 112 ~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~ 191 (568)
.+.++..|+.++ ++|......|.. +.+.|+||++.|+-+ ..+.+++.+.+++..+|+.++++|.
T Consensus 163 ~~i~~v~iP~eg-~~I~g~LhlP~~--------------~~p~P~VIv~gGlDs-~qeD~~~l~~~~l~~rGiA~LtvDm 226 (411)
T PF06500_consen 163 YPIEEVEIPFEG-KTIPGYLHLPSG--------------EKPYPTVIVCGGLDS-LQEDLYRLFRDYLAPRGIAMLTVDM 226 (411)
T ss_dssp SEEEEEEEEETT-CEEEEEEEESSS--------------SS-EEEEEEE--TTS--GGGGHHHHHCCCHHCT-EEEEE--
T ss_pred CCcEEEEEeeCC-cEEEEEEEcCCC--------------CCCCCEEEEeCCcch-hHHHHHHHHHHHHHhCCCEEEEEcc
Confidence 355777888875 788776666643 467899999999954 4445545566778899999999999
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhh
Q 008371 192 RGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLIC 269 (568)
Q Consensus 192 RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~--~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~ 269 (568)
||.|.|.... ...+...-..++++++...- ...+|.++|.|+||+++++.|..++. +|+++|+.+++.+-.-.
T Consensus 227 PG~G~s~~~~---l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~--RlkavV~~Ga~vh~~ft 301 (411)
T PF06500_consen 227 PGQGESPKWP---LTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDP--RLKAVVALGAPVHHFFT 301 (411)
T ss_dssp TTSGGGTTT----S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTT--T-SEEEEES---SCGGH
T ss_pred CCCcccccCC---CCcCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhccc--ceeeEeeeCchHhhhhc
Confidence 9999985321 11222234578889987752 24589999999999999999987766 79999999998654332
Q ss_pred hHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCc--cccc-
Q 008371 270 DRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSS--ANFV- 346 (568)
Q Consensus 270 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~--~~~l- 346 (568)
....... ....|...++..+... ..+...+.... ...|. ...+
T Consensus 302 ~~~~~~~-~P~my~d~LA~rlG~~-------------------~~~~~~l~~el--------------~~~SLk~qGlL~ 347 (411)
T PF06500_consen 302 DPEWQQR-VPDMYLDVLASRLGMA-------------------AVSDESLRGEL--------------NKFSLKTQGLLS 347 (411)
T ss_dssp -HHHHTT-S-HHHHHHHHHHCT-S-------------------CE-HHHHHHHG--------------GGGSTTTTTTTT
T ss_pred cHHHHhc-CCHHHHHHHHHHhCCc-------------------cCCHHHHHHHH--------------HhcCcchhcccc
Confidence 2211111 1222222222221100 00111111111 01111 1233
Q ss_pred -CCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCC-ccccccccccCcccHHHHHHHHHHHh
Q 008371 347 -RNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGG-HLAFYEGITAKSLWWVRAVNVFLDAL 415 (568)
Q Consensus 347 -~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GG-H~~f~eg~~~~~~w~~~~i~eFL~~~ 415 (568)
.+.++|+|.+++++|+++|.+.... .+..+.+.+...++.+. |.+|.. ....+.+||+..
T Consensus 348 ~rr~~~plL~i~~~~D~v~P~eD~~l-ia~~s~~gk~~~~~~~~~~~gy~~--------al~~~~~Wl~~~ 409 (411)
T PF06500_consen 348 GRRCPTPLLAINGEDDPVSPIEDSRL-IAESSTDGKALRIPSKPLHMGYPQ--------ALDEIYKWLEDK 409 (411)
T ss_dssp SS-BSS-EEEEEETT-SSS-HHHHHH-HHHTBTT-EEEEE-SSSHHHHHHH--------HHHHHHHHHHHH
T ss_pred CCCCCcceEEeecCCCCCCCHHHHHH-HHhcCCCCceeecCCCccccchHH--------HHHHHHHHHHHh
Confidence 5789999999999999999886654 45556656666666655 988865 457777888764
No 64
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.64 E-value=3.6e-15 Score=165.87 Aligned_cols=133 Identities=19% Similarity=0.167 Sum_probs=105.0
Q ss_pred EEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCch--hHHHHHHHHHHHhCCceEEEEcCCCCCC
Q 008371 119 FQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSA--AAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (568)
Q Consensus 119 ~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~--~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~ 196 (568)
+++.||.+|..+++.|.+ ..+.|+||++||++.... ..+.......++++||.|+++|+||+|.
T Consensus 1 i~~~DG~~L~~~~~~P~~--------------~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~ 66 (550)
T TIGR00976 1 VPMRDGTRLAIDVYRPAG--------------GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGA 66 (550)
T ss_pred CcCCCCCEEEEEEEecCC--------------CCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEecccccc
Confidence 467899999999998743 346899999999965332 0122235567889999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHHHH-CCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhh
Q 008371 197 ISLTSDCFYNGGWTEDLRRVIDYLHCQ-YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLI 268 (568)
Q Consensus 197 S~~~~~~~~~~~~~~Dl~~vi~~l~~~-~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~ 268 (568)
|++...... ....+|+.++++++.++ ..+.+++++|+||||.+++.++...++ .++++|..++..+...
T Consensus 67 S~g~~~~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~--~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 67 SEGEFDLLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPP--ALRAIAPQEGVWDLYR 136 (550)
T ss_pred CCCceEecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCC--ceeEEeecCcccchhH
Confidence 986533322 45679999999999876 234689999999999999999998877 7999999988877654
No 65
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.63 E-value=6.6e-15 Score=160.63 Aligned_cols=234 Identities=14% Similarity=0.123 Sum_probs=133.6
Q ss_pred CCcEEEEeCCCCCCchhHH-H---HHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcH-HHHHHHHHHHHHHCCCC
Q 008371 153 KNPIVVVIPGLTSDSAAAY-I---KHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWT-EDLRRVIDYLHCQYPEV 227 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y-~---~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-~Dl~~vi~~l~~~~~~~ 227 (568)
.++.||++||+..... .+ . ++++++|.++||+|+++|+||+|.+..... ..++. +++.++++.+.+..+..
T Consensus 187 ~~~PlLiVp~~i~k~y-ilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~---~ddY~~~~i~~al~~v~~~~g~~ 262 (532)
T TIGR01838 187 HKTPLLIVPPWINKYY-ILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKT---FDDYIRDGVIAALEVVEAITGEK 262 (532)
T ss_pred CCCcEEEECcccccce-eeecccchHHHHHHHHCCcEEEEEECCCCCcccccCC---hhhhHHHHHHHHHHHHHHhcCCC
Confidence 4566899999853221 11 1 379999999999999999999998753211 12333 56899999999888888
Q ss_pred cEEEEEecHHHHHHH----HHHHhc-CCCCCceEEEEEcCCCChhhhhH---HHhHHHHHHHHHHHHHH-------HhHh
Q 008371 228 PLYAVGTSIGANILV----KYLGEN-GVNTPLVGAAAICSPWDLLICDR---FINRRLVQKCYDRVIAI-------GLRG 292 (568)
Q Consensus 228 ~i~lvG~SmGG~ial----~ya~~~-~~~~~I~a~V~is~p~d~~~~~~---~~~~~~~~~~~~~~l~~-------~l~~ 292 (568)
+++++||||||.++. .+++.. ++ +|+++++++++.|+..... ++....... .+..+.. .+..
T Consensus 263 kv~lvG~cmGGtl~a~ala~~aa~~~~~--rv~slvll~t~~Df~~~G~l~~f~~~~~~~~-~e~~~~~~G~lpg~~m~~ 339 (532)
T TIGR01838 263 QVNCVGYCIGGTLLSTALAYLAARGDDK--RIKSATFFTTLLDFSDPGELGVFVDEEIVAG-IERQNGGGGYLDGRQMAV 339 (532)
T ss_pred CeEEEEECcCcHHHHHHHHHHHHhCCCC--ccceEEEEecCcCCCCcchhhhhcCchhHHH-HHHHHHhcCCCCHHHHHH
Confidence 999999999999863 244444 44 7999999999988764321 111111000 0111100 0000
Q ss_pred hHHhhhhh---hhccCChhhhhccCCHHHHHHhh-----hc-ccCCCC-CHHHHHHhCC----------cccccCCCccc
Q 008371 293 FAQLHQST---VARLADWEGITKSRSIRDFDNHA-----TR-VLGKFE-TVDAYYRHSS----------SANFVRNVSVP 352 (568)
Q Consensus 293 ~~~~~~~~---~~~~~d~~~i~~~~~l~~fd~~~-----~~-~~~g~~-~~~~yy~~~s----------~~~~l~~I~vP 352 (568)
.+...++. .... ............||-.+ +. +..-+. .+.+.|.... ....+.+|++|
T Consensus 340 ~F~~lrp~~l~w~~~--v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vP 417 (532)
T TIGR01838 340 TFSLLRENDLIWNYY--VDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVP 417 (532)
T ss_pred HHHhcChhhHHHHHH--HHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCC
Confidence 00000000 0000 00000000000111100 00 000000 0112222222 22467899999
Q ss_pred eEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccc
Q 008371 353 LLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEG 396 (568)
Q Consensus 353 vLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg 396 (568)
+|+|+|++|.++|++.... .....++....+++++||+.+++.
T Consensus 418 vLvV~G~~D~IvP~~sa~~-l~~~i~~~~~~vL~~sGHi~~ien 460 (532)
T TIGR01838 418 VYIIATREDHIAPWQSAYR-GAALLGGPKTFVLGESGHIAGVVN 460 (532)
T ss_pred EEEEeeCCCCcCCHHHHHH-HHHHCCCCEEEEECCCCCchHhhC
Confidence 9999999999999876654 345566788889999999999874
No 66
>PRK11071 esterase YqiA; Provisional
Probab=99.62 E-value=7.4e-15 Score=140.87 Aligned_cols=186 Identities=12% Similarity=0.059 Sum_probs=111.5
Q ss_pred cEEEEeCCCCCCchhHHHHHHHHHHHh--CCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEE
Q 008371 155 PIVVVIPGLTSDSAAAYIKHLAFKMAG--HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAV 232 (568)
Q Consensus 155 PvVVllHGl~G~s~~~y~~~l~~~l~~--~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lv 232 (568)
|+||++||++++..++....+...+.+ .+|+|+++|+||++ ++..+.+..+.++.+..+++++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~---------------~~~~~~l~~l~~~~~~~~~~lv 66 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP---------------ADAAELLESLVLEHGGDPLGLV 66 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH---------------HHHHHHHHHHHHHcCCCCeEEE
Confidence 579999999876665443345566654 37999999999984 2344455555555566789999
Q ss_pred EecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhc
Q 008371 233 GTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITK 312 (568)
Q Consensus 233 G~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~ 312 (568)
||||||.+++.++.+++. .+|+++++.+.... +. .+....... ...+..
T Consensus 67 G~S~Gg~~a~~~a~~~~~-----~~vl~~~~~~~~~~---~~-----------------~~~~~~~~~----~~~~~~-- 115 (190)
T PRK11071 67 GSSLGGYYATWLSQCFML-----PAVVVNPAVRPFEL---LT-----------------DYLGENENP----YTGQQY-- 115 (190)
T ss_pred EECHHHHHHHHHHHHcCC-----CEEEECCCCCHHHH---HH-----------------HhcCCcccc----cCCCcE--
Confidence 999999999999999873 35788887663211 00 000000000 000000
Q ss_pred cCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccc
Q 008371 313 SRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLA 392 (568)
Q Consensus 313 ~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~ 392 (568)
.-+...+++. +... ...+. ..+|+++|+|.+|.++|.+....... ++.++++++|+|.-
T Consensus 116 ~~~~~~~~d~---------------~~~~-~~~i~-~~~~v~iihg~~De~V~~~~a~~~~~----~~~~~~~~ggdH~f 174 (190)
T PRK11071 116 VLESRHIYDL---------------KVMQ-IDPLE-SPDLIWLLQQTGDEVLDYRQAVAYYA----ACRQTVEEGGNHAF 174 (190)
T ss_pred EEcHHHHHHH---------------HhcC-CccCC-ChhhEEEEEeCCCCcCCHHHHHHHHH----hcceEEECCCCcch
Confidence 0000011110 0001 11233 67888999999999999886554322 34666889999963
Q ss_pred cccccccCcccHHHHHHHHHH
Q 008371 393 FYEGITAKSLWWVRAVNVFLD 413 (568)
Q Consensus 393 f~eg~~~~~~w~~~~i~eFL~ 413 (568)
.+ ...+.+.+.+|+.
T Consensus 175 --~~----~~~~~~~i~~fl~ 189 (190)
T PRK11071 175 --VG----FERYFNQIVDFLG 189 (190)
T ss_pred --hh----HHHhHHHHHHHhc
Confidence 21 1235577888764
No 67
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.62 E-value=1.2e-14 Score=146.10 Aligned_cols=112 Identities=15% Similarity=0.130 Sum_probs=88.3
Q ss_pred CCCcEEEEeCCCCCCch--hHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcE
Q 008371 152 EKNPIVVVIPGLTSDSA--AAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPL 229 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~--~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i 229 (568)
..+|+||++||+++... ...+..+++.|+++||+|+++|+||||.|+..........+.+|+.++++++++. +..++
T Consensus 23 ~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~~v 101 (266)
T TIGR03101 23 GPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-GHPPV 101 (266)
T ss_pred CCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-CCCCE
Confidence 34689999999965322 2234568899999999999999999999975432222234679999999999875 45789
Q ss_pred EEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 230 YAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 230 ~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
+++||||||.+++.++.++++ +++++|++++....
T Consensus 102 ~LvG~SmGG~vAl~~A~~~p~--~v~~lVL~~P~~~g 136 (266)
T TIGR03101 102 TLWGLRLGALLALDAANPLAA--KCNRLVLWQPVVSG 136 (266)
T ss_pred EEEEECHHHHHHHHHHHhCcc--ccceEEEeccccch
Confidence 999999999999999999887 79999999876543
No 68
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.61 E-value=4.6e-15 Score=144.64 Aligned_cols=196 Identities=21% Similarity=0.235 Sum_probs=127.3
Q ss_pred HHHHHHHhCCceEEEEcCCCCCCCCCCC----CCCCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEecHHHHHHHHHHHh
Q 008371 174 HLAFKMAGHGWNVVVSNHRGLGGISLTS----DCFYNGGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGE 247 (568)
Q Consensus 174 ~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~----~~~~~~~~~~Dl~~vi~~l~~~~--~~~~i~lvG~SmGG~ial~ya~~ 247 (568)
.....|+++||.|+++|+||.++....- .........+|+.++++++.++. ...+++++|+|+||.+++..+..
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 4567788999999999999987532110 11111234589999999998875 34689999999999999999998
Q ss_pred cCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhccc
Q 008371 248 NGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVL 327 (568)
Q Consensus 248 ~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~ 327 (568)
+++ .++++|+.++..+.......... +... ++...
T Consensus 85 ~~~--~f~a~v~~~g~~d~~~~~~~~~~------~~~~--------------------------------~~~~~----- 119 (213)
T PF00326_consen 85 HPD--RFKAAVAGAGVSDLFSYYGTTDI------YTKA--------------------------------EYLEY----- 119 (213)
T ss_dssp TCC--GSSEEEEESE-SSTTCSBHHTCC------HHHG--------------------------------HHHHH-----
T ss_pred cce--eeeeeeccceecchhcccccccc------cccc--------------------------------ccccc-----
Confidence 888 79999999988876532211000 0000 00000
Q ss_pred CCCCCHHHHHHhCCcccccCC--CccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcc
Q 008371 328 GKFETVDAYYRHSSSANFVRN--VSVPLLCISTLDDPVCTREAIPW---DECRANEKIILATTRHGGHLAFYEGITAKSL 402 (568)
Q Consensus 328 ~g~~~~~~yy~~~s~~~~l~~--I~vPvLiI~G~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~ 402 (568)
.......+.|+..++...+.+ +++|+|++||++|+.||.+.... .+.+...++++.+++++|| ++... ....
T Consensus 120 ~~~~~~~~~~~~~s~~~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH-~~~~~--~~~~ 196 (213)
T PF00326_consen 120 GDPWDNPEFYRELSPISPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGH-GFGNP--ENRR 196 (213)
T ss_dssp SSTTTSHHHHHHHHHGGGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SS-STTSH--HHHH
T ss_pred CccchhhhhhhhhccccccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCC-CCCCc--hhHH
Confidence 000012233444455566666 89999999999999999874433 2345566799999999999 33321 1223
Q ss_pred cHHHHHHHHHHHhhc
Q 008371 403 WWVRAVNVFLDALNT 417 (568)
Q Consensus 403 w~~~~i~eFL~~~~~ 417 (568)
.+.+.+.+||++.+.
T Consensus 197 ~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 197 DWYERILDFFDKYLK 211 (213)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 567889999987653
No 69
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.58 E-value=5e-14 Score=166.91 Aligned_cols=255 Identities=14% Similarity=0.150 Sum_probs=140.3
Q ss_pred CCcEEEEeCCCCCCchhHHHH-----HHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHH---HHHC
Q 008371 153 KNPIVVVIPGLTSDSAAAYIK-----HLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYL---HCQY 224 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~-----~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l---~~~~ 224 (568)
.+|+||++||+.++ ...| + +++..|.++||+|+++|+ |.++.. ...+..+..+++..+++.+ +...
T Consensus 66 ~~~plllvhg~~~~-~~~~-d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~-~~~~~~~l~~~i~~l~~~l~~v~~~~ 139 (994)
T PRK07868 66 VGPPVLMVHPMMMS-ADMW-DVTRDDGAVGILHRAGLDPWVIDF---GSPDKV-EGGMERNLADHVVALSEAIDTVKDVT 139 (994)
T ss_pred CCCcEEEECCCCCC-ccce-ecCCcccHHHHHHHCCCEEEEEcC---CCCChh-HcCccCCHHHHHHHHHHHHHHHHHhh
Confidence 45789999999653 3333 3 248899999999999995 544432 1112234555655555554 3332
Q ss_pred CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhH--HH-----------hHHHHHHHH--HHHHHHH
Q 008371 225 PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDR--FI-----------NRRLVQKCY--DRVIAIG 289 (568)
Q Consensus 225 ~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~--~~-----------~~~~~~~~~--~~~l~~~ 289 (568)
..+++++||||||.+++.|++.++++ +|+++|++++|.|+..... .. ......... .......
T Consensus 140 -~~~v~lvG~s~GG~~a~~~aa~~~~~-~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 217 (994)
T PRK07868 140 -GRDVHLVGYSQGGMFCYQAAAYRRSK-DIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRLDIPGWMARTG 217 (994)
T ss_pred -CCceEEEEEChhHHHHHHHHHhcCCC-ccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcCCCCHHHHHHH
Confidence 35899999999999999998865432 6999999999987532210 00 000000000 0000000
Q ss_pred ---hHh--hHHhhhhhhhccCChhhhhccCCHHHHHHhhhc-ccCC--CC-CHHHHHHhCCc----------ccccCCCc
Q 008371 290 ---LRG--FAQLHQSTVARLADWEGITKSRSIRDFDNHATR-VLGK--FE-TVDAYYRHSSS----------ANFVRNVS 350 (568)
Q Consensus 290 ---l~~--~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~-~~~g--~~-~~~~yy~~~s~----------~~~l~~I~ 350 (568)
++. ........+....+.+........+++...... ...+ +. ....++..... ...+.+|+
T Consensus 218 ~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~ 297 (994)
T PRK07868 218 FQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADIT 297 (994)
T ss_pred HHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCC
Confidence 000 000000111111111111000001111111000 0000 01 11222221111 12478999
Q ss_pred cceEEEEeCCCCCCCCCCcchHHHhcCCCEEE-EEeCCCCcccccccccc-CcccHHHHHHHHHHHhhcC
Q 008371 351 VPLLCISTLDDPVCTREAIPWDECRANEKIIL-ATTRHGGHLAFYEGITA-KSLWWVRAVNVFLDALNTS 418 (568)
Q Consensus 351 vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l-~~~~~GGH~~f~eg~~~-~~~w~~~~i~eFL~~~~~~ 418 (568)
+|+|+|+|++|+++|++.... ..+..++..+ .+++++||++++-|... ...| ..+.+||......
T Consensus 298 ~P~L~i~G~~D~ivp~~~~~~-l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~w--p~i~~wl~~~~~~ 364 (994)
T PRK07868 298 CPVLAFVGEVDDIGQPASVRG-IRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTW--PTVADWVKWLEGD 364 (994)
T ss_pred CCEEEEEeCCCCCCCHHHHHH-HHHhCCCCeEEEEeCCCCCEeeeechhhhhhhC--hHHHHHHHHhccC
Confidence 999999999999999887655 3555678877 67899999999987433 3446 9999999987654
No 70
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.55 E-value=1e-13 Score=128.24 Aligned_cols=177 Identities=22% Similarity=0.279 Sum_probs=134.0
Q ss_pred CCCCcEEEEeCC---CCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCC
Q 008371 151 CEKNPIVVVIPG---LTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEV 227 (568)
Q Consensus 151 ~~~~PvVVllHG---l~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~ 227 (568)
.+.+|+.|+||- ++|+....-+..++..|.++||.|+.+|+||.|+|.++-+. ..|..+|..++++|++.++|..
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~--GiGE~~Da~aaldW~~~~hp~s 102 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDN--GIGELEDAAAALDWLQARHPDS 102 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccC--CcchHHHHHHHHHHHHhhCCCc
Confidence 367899999984 33545555567899999999999999999999999875432 3567899999999999999988
Q ss_pred cE-EEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCC
Q 008371 228 PL-YAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLAD 306 (568)
Q Consensus 228 ~i-~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d 306 (568)
+. .+.|+|+||.|+..+|.+.++ ....+++.++.+.. +
T Consensus 103 ~~~~l~GfSFGa~Ia~~la~r~~e---~~~~is~~p~~~~~---------------d----------------------- 141 (210)
T COG2945 103 ASCWLAGFSFGAYIAMQLAMRRPE---ILVFISILPPINAY---------------D----------------------- 141 (210)
T ss_pred hhhhhcccchHHHHHHHHHHhccc---ccceeeccCCCCch---------------h-----------------------
Confidence 87 778899999999999999877 66677776655410 0
Q ss_pred hhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008371 307 WEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTR 386 (568)
Q Consensus 307 ~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~ 386 (568)
...+.....|.++|+|+.|.+++....- .........+++++
T Consensus 142 ------------------------------------fs~l~P~P~~~lvi~g~~Ddvv~l~~~l--~~~~~~~~~~i~i~ 183 (210)
T COG2945 142 ------------------------------------FSFLAPCPSPGLVIQGDADDVVDLVAVL--KWQESIKITVITIP 183 (210)
T ss_pred ------------------------------------hhhccCCCCCceeEecChhhhhcHHHHH--HhhcCCCCceEEec
Confidence 0113456789999999999988765332 22333667888999
Q ss_pred CCCccccccccccCcccHHHHHHHHHH
Q 008371 387 HGGHLAFYEGITAKSLWWVRAVNVFLD 413 (568)
Q Consensus 387 ~GGH~~f~eg~~~~~~w~~~~i~eFL~ 413 (568)
+++|+-+ | +-..+.+.+.+|+.
T Consensus 184 ~a~HFF~--g---Kl~~l~~~i~~~l~ 205 (210)
T COG2945 184 GADHFFH--G---KLIELRDTIADFLE 205 (210)
T ss_pred CCCceec--c---cHHHHHHHHHHHhh
Confidence 9999643 2 22357788999985
No 71
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.55 E-value=7.2e-14 Score=130.96 Aligned_cols=208 Identities=16% Similarity=0.145 Sum_probs=134.0
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEE
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYA 231 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~l 231 (568)
....++|+|||+-.+....++..++..+.+.||.++.+|++|.|.|+..-........++|+..+++++....- .--++
T Consensus 31 gs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr-~v~vi 109 (269)
T KOG4667|consen 31 GSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNR-VVPVI 109 (269)
T ss_pred CCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCce-EEEEE
Confidence 34678999999987777889999999999999999999999999998643221112345999999999986421 11378
Q ss_pred EEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhh
Q 008371 232 VGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGIT 311 (568)
Q Consensus 232 vG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~ 311 (568)
+|||-||.+++.|+.++.+ +.-+|-++.-++....- ..++......+....++..+-.+. ....
T Consensus 110 ~gHSkGg~Vvl~ya~K~~d---~~~viNcsGRydl~~~I---~eRlg~~~l~~ike~Gfid~~~rk-------G~y~--- 173 (269)
T KOG4667|consen 110 LGHSKGGDVVLLYASKYHD---IRNVINCSGRYDLKNGI---NERLGEDYLERIKEQGFIDVGPRK-------GKYG--- 173 (269)
T ss_pred EeecCccHHHHHHHHhhcC---chheEEcccccchhcch---hhhhcccHHHHHHhCCceecCccc-------CCcC---
Confidence 9999999999999999987 77777777766664221 111101111111111100000000 0000
Q ss_pred ccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccC--CCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCC
Q 008371 312 KSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVR--NVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGG 389 (568)
Q Consensus 312 ~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~--~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GG 389 (568)
..-+.. ++ .+.-...+..... ..+||+|-+||..|.+||.+.... .++..|+..+.+++++.
T Consensus 174 ~rvt~e--------------Sl-mdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~Ake-fAk~i~nH~L~iIEgAD 237 (269)
T KOG4667|consen 174 YRVTEE--------------SL-MDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKE-FAKIIPNHKLEIIEGAD 237 (269)
T ss_pred ceecHH--------------HH-HHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHH-HHHhccCCceEEecCCC
Confidence 000000 00 0111111122223 348999999999999999997765 67788889999999999
Q ss_pred ccc
Q 008371 390 HLA 392 (568)
Q Consensus 390 H~~ 392 (568)
|.-
T Consensus 238 Hny 240 (269)
T KOG4667|consen 238 HNY 240 (269)
T ss_pred cCc
Confidence 964
No 72
>PLN00021 chlorophyllase
Probab=99.52 E-value=5.5e-13 Score=137.48 Aligned_cols=116 Identities=19% Similarity=0.168 Sum_probs=85.8
Q ss_pred CEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCC
Q 008371 125 GTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCF 204 (568)
Q Consensus 125 g~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~ 204 (568)
..+.++++.|.. ....|+||++||+.++ ...| ..+++.++++||.|+++|++|++....
T Consensus 37 ~~~p~~v~~P~~--------------~g~~PvVv~lHG~~~~-~~~y-~~l~~~Las~G~~VvapD~~g~~~~~~----- 95 (313)
T PLN00021 37 PPKPLLVATPSE--------------AGTYPVLLFLHGYLLY-NSFY-SQLLQHIASHGFIVVAPQLYTLAGPDG----- 95 (313)
T ss_pred CCceEEEEeCCC--------------CCCCCEEEEECCCCCC-cccH-HHHHHHHHhCCCEEEEecCCCcCCCCc-----
Confidence 346677777643 3567999999999654 4455 679999999999999999999754311
Q ss_pred CCCCcHHHHHHHHHHHHHHC----------CCCcEEEEEecHHHHHHHHHHHhcCCC---CCceEEEEEcCC
Q 008371 205 YNGGWTEDLRRVIDYLHCQY----------PEVPLYAVGTSIGANILVKYLGENGVN---TPLVGAAAICSP 263 (568)
Q Consensus 205 ~~~~~~~Dl~~vi~~l~~~~----------~~~~i~lvG~SmGG~ial~ya~~~~~~---~~I~a~V~is~p 263 (568)
....+|..++++++.+.. ...+++++||||||.+++.++.++++. .+++++|++++.
T Consensus 96 --~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv 165 (313)
T PLN00021 96 --TDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPV 165 (313)
T ss_pred --hhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccc
Confidence 123467777788776531 125799999999999999999887642 368888888664
No 73
>PLN02442 S-formylglutathione hydrolase
Probab=99.51 E-value=1.8e-12 Score=132.30 Aligned_cols=208 Identities=15% Similarity=0.159 Sum_probs=124.8
Q ss_pred CCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHH--HHHHHHHhCCceEEEEcCCCCCC----
Q 008371 123 DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIK--HLAFKMAGHGWNVVVSNHRGLGG---- 196 (568)
Q Consensus 123 DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~--~l~~~l~~~Gy~Vvv~D~RG~G~---- 196 (568)
-|..+.+..+.|+.. ...+.|+|+++||+.|+. ..+.. .+...+...|+.|+++|..++|.
T Consensus 28 l~~~~~~~vy~P~~~------------~~~~~Pvv~~lHG~~~~~-~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~ 94 (283)
T PLN02442 28 LGCSMTFSVYFPPAS------------DSGKVPVLYWLSGLTCTD-ENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEG 94 (283)
T ss_pred cCCceEEEEEcCCcc------------cCCCCCEEEEecCCCcCh-HHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCC
Confidence 467788887777531 135689999999997654 33422 24456677899999999877661
Q ss_pred -CCC---C-CCCCC-------------CCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEE
Q 008371 197 -ISL---T-SDCFY-------------NGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAA 258 (568)
Q Consensus 197 -S~~---~-~~~~~-------------~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V 258 (568)
+.. . ....| ..-..+++...++.........+++++||||||..++.++.++|+ .+++++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~--~~~~~~ 172 (283)
T PLN02442 95 EADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPD--KYKSVS 172 (283)
T ss_pred CccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCch--hEEEEE
Confidence 100 0 00001 001224444444444333455689999999999999999999988 799999
Q ss_pred EEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHH
Q 008371 259 AICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYR 338 (568)
Q Consensus 259 ~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~ 338 (568)
++++..+..... +. ..... .+ + .. ...++.+ +.
T Consensus 173 ~~~~~~~~~~~~-~~-----~~~~~--------~~-------~---g~--------~~~~~~~---------------~d 205 (283)
T PLN02442 173 AFAPIANPINCP-WG-----QKAFT--------NY-------L---GS--------DKADWEE---------------YD 205 (283)
T ss_pred EECCccCcccCc-hh-----hHHHH--------HH-------c---CC--------ChhhHHH---------------cC
Confidence 998876643110 00 00000 00 0 00 0000100 11
Q ss_pred hCCcccccCCCccceEEEEeCCCCCCCCCC--cc--hHHHhcCCCEEEEEeCCCCccc
Q 008371 339 HSSSANFVRNVSVPLLCISTLDDPVCTREA--IP--WDECRANEKIILATTRHGGHLA 392 (568)
Q Consensus 339 ~~s~~~~l~~I~vPvLiI~G~dDpivp~~~--~~--~~~~~~~~~~~l~~~~~GGH~~ 392 (568)
..+....+.++++|+++++|++|++++... .. ....+...++++.++++++|.-
T Consensus 206 ~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~~~~~~pg~~H~~ 263 (283)
T PLN02442 206 ATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPVTLRLQPGYDHSY 263 (283)
T ss_pred hhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCeEEEEeCCCCccH
Confidence 122234455678999999999999998631 11 1233455679999999999953
No 74
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.49 E-value=1.8e-13 Score=129.81 Aligned_cols=259 Identities=19% Similarity=0.250 Sum_probs=145.5
Q ss_pred EEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCC
Q 008371 117 HLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (568)
Q Consensus 117 ~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~ 196 (568)
..+..+||..+..+.+...+ +.+--+++.|-+|-.. .|++.++..++++||.|+.+|+||.|.
T Consensus 8 ~~l~~~DG~~l~~~~~pA~~----------------~~~g~~~va~a~Gv~~-~fYRrfA~~a~~~Gf~Vlt~dyRG~g~ 70 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPADG----------------KASGRLVVAGATGVGQ-YFYRRFAAAAAKAGFEVLTFDYRGIGQ 70 (281)
T ss_pred cccccCCCccCccccccCCC----------------CCCCcEEecccCCcch-hHhHHHHHHhhccCceEEEEecccccC
Confidence 45778899999888774322 2222345555556444 555999999999999999999999999
Q ss_pred CCCCCCCCCC---CCcH-HHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHH
Q 008371 197 ISLTSDCFYN---GGWT-EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRF 272 (568)
Q Consensus 197 S~~~~~~~~~---~~~~-~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~ 272 (568)
|..++..... .+|. .|+.++++.+++..+..|.+.|||||||.+... +++++ +..+....++..-.. .+
T Consensus 71 S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL-~~~~~---k~~a~~vfG~gagws---g~ 143 (281)
T COG4757 71 SRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGL-LGQHP---KYAAFAVFGSGAGWS---GW 143 (281)
T ss_pred CCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecc-cccCc---ccceeeEeccccccc---cc
Confidence 9876544222 2233 699999999999889999999999999998653 33333 344444444322211 11
Q ss_pred HhHHH---HHHHHHHH--HHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccC
Q 008371 273 INRRL---VQKCYDRV--IAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVR 347 (568)
Q Consensus 273 ~~~~~---~~~~~~~~--l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~ 347 (568)
+.+.. ...+++-. ....++++.. ..+....+ -......++|.+....+..-+.+-.. ....+...
T Consensus 144 m~~~~~l~~~~l~~lv~p~lt~w~g~~p---~~l~G~G~---d~p~~v~RdW~RwcR~p~y~fddp~~----~~~~q~ya 213 (281)
T COG4757 144 MGLRERLGAVLLWNLVGPPLTFWKGYMP---KDLLGLGS---DLPGTVMRDWARWCRHPRYYFDDPAM----RNYRQVYA 213 (281)
T ss_pred hhhhhcccceeeccccccchhhccccCc---HhhcCCCc---cCcchHHHHHHHHhcCccccccChhH----hHHHHHHH
Confidence 11100 00000000 0000111110 11111110 11123345555544333222222110 00123456
Q ss_pred CCccceEEEEeCCCCCCCCCCcchH-HHhcCCCEEEEEeCC----CCccccccccccCcccHHHHHHHHH
Q 008371 348 NVSVPLLCISTLDDPVCTREAIPWD-ECRANEKIILATTRH----GGHLAFYEGITAKSLWWVRAVNVFL 412 (568)
Q Consensus 348 ~I~vPvLiI~G~dDpivp~~~~~~~-~~~~~~~~~l~~~~~----GGH~~f~eg~~~~~~w~~~~i~eFL 412 (568)
.+++|+.++...||+.+|+.+.+.. ..-.+..++...++. -||++++.... +..| +.+.+|+
T Consensus 214 aVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~-Ealw--k~~L~w~ 280 (281)
T COG4757 214 AVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPF-EALW--KEMLGWF 280 (281)
T ss_pred HhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccch-HHHH--HHHHHhh
Confidence 8999999999999999998876542 222344455555544 39999987311 3334 5555543
No 75
>PRK11460 putative hydrolase; Provisional
Probab=99.47 E-value=2.3e-12 Score=127.55 Aligned_cols=179 Identities=12% Similarity=0.019 Sum_probs=114.0
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCC-------CCCCCcH-------HHHHHH
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDC-------FYNGGWT-------EDLRRV 216 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~-------~~~~~~~-------~Dl~~v 216 (568)
.+.+|+||++||+++ +...+ ..+++.+.+.++.+.+++.+|.........+ ....... +++.+.
T Consensus 13 ~~~~~~vIlLHG~G~-~~~~~-~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~ 90 (232)
T PRK11460 13 KPAQQLLLLFHGVGD-NPVAM-GEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIET 90 (232)
T ss_pred CCCCcEEEEEeCCCC-ChHHH-HHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHH
Confidence 456789999999965 44444 6799999887777777778875432111000 0001111 223344
Q ss_pred HHHHHHHC--CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhH
Q 008371 217 IDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFA 294 (568)
Q Consensus 217 i~~l~~~~--~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 294 (568)
++++..++ +..+++++|||+||.+++.++...++ .+.+++++++.+..
T Consensus 91 i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~--~~~~vv~~sg~~~~---------------------------- 140 (232)
T PRK11460 91 VRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPG--LAGRVIAFSGRYAS---------------------------- 140 (232)
T ss_pred HHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC--cceEEEEecccccc----------------------------
Confidence 55555554 24579999999999999998888776 56666665431100
Q ss_pred HhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchH--
Q 008371 295 QLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWD-- 372 (568)
Q Consensus 295 ~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~-- 372 (568)
.. .....++|++++||++|+++|.+.....
T Consensus 141 ---------~~---------------------------------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~ 172 (232)
T PRK11460 141 ---------LP---------------------------------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQE 172 (232)
T ss_pred ---------cc---------------------------------------ccccCCCcEEEEecCCCCccCHHHHHHHHH
Confidence 00 0012368999999999999998754432
Q ss_pred -HHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhhc
Q 008371 373 -ECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (568)
Q Consensus 373 -~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~ 417 (568)
+.....++++..++++||..-.+ ..+.+.+||.+.+.
T Consensus 173 ~L~~~g~~~~~~~~~~~gH~i~~~--------~~~~~~~~l~~~l~ 210 (232)
T PRK11460 173 ALISLGGDVTLDIVEDLGHAIDPR--------LMQFALDRLRYTVP 210 (232)
T ss_pred HHHHCCCCeEEEEECCCCCCCCHH--------HHHHHHHHHHHHcc
Confidence 23344678899999999965322 44667777776664
No 76
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.46 E-value=1.3e-12 Score=127.05 Aligned_cols=107 Identities=21% Similarity=0.309 Sum_probs=79.6
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhC-CceEEEEcCCCCCCCCCCCCCC-CCCCcHHHHHHHHHHHHHHCCCCcE
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGH-GWNVVVSNHRGLGGISLTSDCF-YNGGWTEDLRRVIDYLHCQYPEVPL 229 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~-~~~~~~~Dl~~vi~~l~~~~~~~~i 229 (568)
...|++++.||. |.|.-.| ..++.++..+ ..+|+++|+||||.+....+.. ..+.+..|+.++++++-...+ .+|
T Consensus 72 t~gpil~l~HG~-G~S~LSf-A~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~-~~i 148 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSF-AIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELP-PQI 148 (343)
T ss_pred CCccEEEEeecC-cccchhH-HHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCC-Cce
Confidence 568999999997 5666566 5677777653 6789999999999998665433 335667888888887764433 479
Q ss_pred EEEEecHHHHHHHHHHHhcCCCCCceEEEEEcC
Q 008371 230 YAVGTSIGANILVKYLGENGVNTPLVGAAAICS 262 (568)
Q Consensus 230 ~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~ 262 (568)
++|||||||.|+...+...--. .+.|++.|+.
T Consensus 149 ilVGHSmGGaIav~~a~~k~lp-sl~Gl~viDV 180 (343)
T KOG2564|consen 149 ILVGHSMGGAIAVHTAASKTLP-SLAGLVVIDV 180 (343)
T ss_pred EEEeccccchhhhhhhhhhhch-hhhceEEEEE
Confidence 9999999999998776654322 3888888753
No 77
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.46 E-value=8.8e-13 Score=138.56 Aligned_cols=289 Identities=20% Similarity=0.195 Sum_probs=175.9
Q ss_pred CCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHH----HHHHHHHHhCCceE
Q 008371 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYI----KHLAFKMAGHGWNV 186 (568)
Q Consensus 111 ~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~----~~l~~~l~~~Gy~V 186 (568)
..+.|.+.+++.||..+.+...... ..++|+|++.||+.++|..+.. +.++-.|+++||+|
T Consensus 45 gy~~E~h~V~T~DgYiL~lhRIp~~---------------~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDV 109 (403)
T KOG2624|consen 45 GYPVEEHEVTTEDGYILTLHRIPRG---------------KKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDV 109 (403)
T ss_pred CCceEEEEEEccCCeEEEEeeecCC---------------CCCCCcEEEeeccccccccceecCccccHHHHHHHcCCce
Confidence 4577899999999998888655321 2688999999999887664432 25778899999999
Q ss_pred EEEcCCCCCCCCCC-------CCCCCCCCcH----HHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCC-CCCc
Q 008371 187 VVSNHRGLGGISLT-------SDCFYNGGWT----EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGV-NTPL 254 (568)
Q Consensus 187 vv~D~RG~G~S~~~-------~~~~~~~~~~----~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~-~~~I 254 (568)
+.-|.||--.|... ...+....|- .|+.++|+++.+..+..+++.||||.|+.+...++.+.++ +.+|
T Consensus 110 WLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI 189 (403)
T KOG2624|consen 110 WLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKI 189 (403)
T ss_pred eeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhh
Confidence 99999996555321 1123222332 5999999999999888999999999999999998888865 3379
Q ss_pred eEEEEEcCCCChhhhhHHHhHHHHHH-----HHHHH---------------HHHHhHh---hHH-hhhhhhhccC--Chh
Q 008371 255 VGAAAICSPWDLLICDRFINRRLVQK-----CYDRV---------------IAIGLRG---FAQ-LHQSTVARLA--DWE 308 (568)
Q Consensus 255 ~a~V~is~p~d~~~~~~~~~~~~~~~-----~~~~~---------------l~~~l~~---~~~-~~~~~~~~~~--d~~ 308 (568)
+.+++++|..-............... +.... +...+.. ... .....+.-.. +..
T Consensus 190 ~~~~aLAP~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~ 269 (403)
T KOG2624|consen 190 KSFIALAPAAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSN 269 (403)
T ss_pred heeeeecchhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchH
Confidence 99999988663331111111100000 00000 0000000 000 0000000000 000
Q ss_pred hh------------hccCC---HHHHHHhhhc---ccCCCC---CHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCC
Q 008371 309 GI------------TKSRS---IRDFDNHATR---VLGKFE---TVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTRE 367 (568)
Q Consensus 309 ~i------------~~~~~---l~~fd~~~~~---~~~g~~---~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~ 367 (568)
.. ....+ +..|...... +.+.+. ....|-+...+...+.+|++|+.+.+|.+|-++.++
T Consensus 270 ~~n~~~~~~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~ 349 (403)
T KOG2624|consen 270 NWNTTLLPVYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPE 349 (403)
T ss_pred hhhhcccchhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHH
Confidence 00 01112 2223222211 112222 334444445566788999999999999999999998
Q ss_pred CcchHHHhcCCCEEEE---EeCCCCccccccccccCcccHHHHHHHHHHHhh
Q 008371 368 AIPWDECRANEKIILA---TTRHGGHLAFYEGITAKSLWWVRAVNVFLDALN 416 (568)
Q Consensus 368 ~~~~~~~~~~~~~~l~---~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~ 416 (568)
.+.... ...++.... .+++=.|+.|+-|.... ..+.+.|.+.++...
T Consensus 350 DV~~~~-~~~~~~~~~~~~~~~~ynHlDFi~g~da~-~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 350 DVLILL-LVLPNSVIKYIVPIPEYNHLDFIWGLDAK-EEVYDPVIERLRLFE 399 (403)
T ss_pred HHHHHH-HhcccccccccccCCCccceeeeeccCcH-HHHHHHHHHHHHhhh
Confidence 776533 233333222 26888999999875433 367788888887654
No 78
>PRK10115 protease 2; Provisional
Probab=99.46 E-value=1.1e-12 Score=148.92 Aligned_cols=227 Identities=15% Similarity=0.092 Sum_probs=151.5
Q ss_pred CCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcC
Q 008371 112 ISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (568)
Q Consensus 112 ~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~ 191 (568)
...++..++..||.+|.+.++.+++. ..+.+.|+||++||..+.+....+......++++||.|+..|.
T Consensus 414 ~~~e~v~~~s~DG~~Ip~~l~~~~~~-----------~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~ 482 (686)
T PRK10115 414 YRSEHLWITARDGVEVPVSLVYHRKH-----------FRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHV 482 (686)
T ss_pred cEEEEEEEECCCCCEEEEEEEEECCC-----------CCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEc
Confidence 34466678889999999866654431 0134569999999988766544445566778899999999999
Q ss_pred CCCCCCCCC---CCC-CCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCC
Q 008371 192 RGLGGISLT---SDC-FYNGGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (568)
Q Consensus 192 RG~G~S~~~---~~~-~~~~~~~~Dl~~vi~~l~~~~--~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d 265 (568)
||-|+-... ..+ .......+|+.++++++.++. ...++.+.|.|.||.++...+.+.|+ .++++|+..+..|
T Consensus 483 RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd--lf~A~v~~vp~~D 560 (686)
T PRK10115 483 RGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPE--LFHGVIAQVPFVD 560 (686)
T ss_pred CCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChh--heeEEEecCCchh
Confidence 996653311 001 111234689999999998764 24689999999999999999999988 8999999888777
Q ss_pred hhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccc
Q 008371 266 LLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANF 345 (568)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~ 345 (568)
+.... .. ..+ + ....++.+. ..+. -....+|+...|+...
T Consensus 561 ~~~~~---~~------------~~~--------p--------------~~~~~~~e~-G~p~--~~~~~~~l~~~SP~~~ 600 (686)
T PRK10115 561 VVTTM---LD------------ESI--------P--------------LTTGEFEEW-GNPQ--DPQYYEYMKSYSPYDN 600 (686)
T ss_pred Hhhhc---cc------------CCC--------C--------------CChhHHHHh-CCCC--CHHHHHHHHHcCchhc
Confidence 64210 00 000 0 000011110 0000 0112456777899999
Q ss_pred cCCCccc-eEEEEeCCCCCCCCCCcchH---HHhcCCCEEEEEe---CCCCcc
Q 008371 346 VRNVSVP-LLCISTLDDPVCTREAIPWD---ECRANEKIILATT---RHGGHL 391 (568)
Q Consensus 346 l~~I~vP-vLiI~G~dDpivp~~~~~~~---~~~~~~~~~l~~~---~~GGH~ 391 (568)
+.+++.| +|+++|.+|+-||+....+. +........++++ +++||.
T Consensus 601 v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg 653 (686)
T PRK10115 601 VTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHG 653 (686)
T ss_pred cCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceEEEEecCCCCCC
Confidence 9999999 56779999999998754432 2223344555666 899997
No 79
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.44 E-value=1.4e-12 Score=134.68 Aligned_cols=245 Identities=20% Similarity=0.155 Sum_probs=136.7
Q ss_pred CCCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEE
Q 008371 110 PDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVS 189 (568)
Q Consensus 110 p~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~ 189 (568)
+.+.+....|...+|..|....+.|.+. ..+.|.||.+||.++.+.... ..+ .++.+||.|+.+
T Consensus 52 ~~~~vy~v~f~s~~g~~V~g~l~~P~~~-------------~~~~Pavv~~hGyg~~~~~~~--~~~-~~a~~G~~vl~~ 115 (320)
T PF05448_consen 52 PGVEVYDVSFESFDGSRVYGWLYRPKNA-------------KGKLPAVVQFHGYGGRSGDPF--DLL-PWAAAGYAVLAM 115 (320)
T ss_dssp SSEEEEEEEEEEGGGEEEEEEEEEES-S-------------SSSEEEEEEE--TT--GGGHH--HHH-HHHHTT-EEEEE
T ss_pred CCEEEEEEEEEccCCCEEEEEEEecCCC-------------CCCcCEEEEecCCCCCCCCcc--ccc-ccccCCeEEEEe
Confidence 4556677788888999999988877531 467899999999976544322 233 356789999999
Q ss_pred cCCCCCCCCCCC-------CCCC-C------------CCcHHHHHHHHHHHHHHC--CCCcEEEEEecHHHHHHHHHHHh
Q 008371 190 NHRGLGGISLTS-------DCFY-N------------GGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGE 247 (568)
Q Consensus 190 D~RG~G~S~~~~-------~~~~-~------------~~~~~Dl~~vi~~l~~~~--~~~~i~lvG~SmGG~ial~ya~~ 247 (568)
|.||+|+..... ...+ . .+...|...+++++...- +.++|.+.|.|.||.+++..++-
T Consensus 116 d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaL 195 (320)
T PF05448_consen 116 DVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL 195 (320)
T ss_dssp --TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred cCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHh
Confidence 999999422110 0000 0 012368999999998753 24689999999999999999998
Q ss_pred cCCCCCceEEEEEcCCC-ChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcc
Q 008371 248 NGVNTPLVGAAAICSPW-DLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRV 326 (568)
Q Consensus 248 ~~~~~~I~a~V~is~p~-d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~ 326 (568)
.+. |+++++..|.. |.......-... ..|. .+..+++..... .. .. ++.+
T Consensus 196 d~r---v~~~~~~vP~l~d~~~~~~~~~~~---~~y~-----~~~~~~~~~d~~----~~--------~~---~~v~--- 246 (320)
T PF05448_consen 196 DPR---VKAAAADVPFLCDFRRALELRADE---GPYP-----EIRRYFRWRDPH----HE--------RE---PEVF--- 246 (320)
T ss_dssp SST----SEEEEESESSSSHHHHHHHT--S---TTTH-----HHHHHHHHHSCT----HC--------HH---HHHH---
T ss_pred Ccc---ccEEEecCCCccchhhhhhcCCcc---ccHH-----HHHHHHhccCCC----cc--------cH---HHHH---
Confidence 764 99998886633 332110000000 0000 111121110000 00 00 0000
Q ss_pred cCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHH
Q 008371 327 LGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVR 406 (568)
Q Consensus 327 ~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~ 406 (568)
+-..-.+..+..++|++|+++-.|-.|++||++..-..........++.+++.+||-..-+ +-.+
T Consensus 247 --------~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~~~-------~~~~ 311 (320)
T PF05448_consen 247 --------ETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYGPE-------FQED 311 (320)
T ss_dssp --------HHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTTHH-------HHHH
T ss_pred --------HHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCchhh-------HHHH
Confidence 0011122345567899999999999999999985433233344568999999999954322 2357
Q ss_pred HHHHHHHH
Q 008371 407 AVNVFLDA 414 (568)
Q Consensus 407 ~i~eFL~~ 414 (568)
...+||.+
T Consensus 312 ~~~~~l~~ 319 (320)
T PF05448_consen 312 KQLNFLKE 319 (320)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 78888864
No 80
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.44 E-value=1.3e-13 Score=139.93 Aligned_cols=130 Identities=20% Similarity=0.138 Sum_probs=92.9
Q ss_pred CCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHH--HH------HHHHhCCceEEEEcCCCC
Q 008371 123 DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKH--LA------FKMAGHGWNVVVSNHRGL 194 (568)
Q Consensus 123 DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~--l~------~~l~~~Gy~Vvv~D~RG~ 194 (568)
||.+|+.|.+.| +. ....+.|+||..|++..+........ .. ..++++||.||+.|.||.
T Consensus 1 DGv~L~adv~~P-~~-----------~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~ 68 (272)
T PF02129_consen 1 DGVRLAADVYRP-GA-----------DGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGT 68 (272)
T ss_dssp TS-EEEEEEEEE--------------TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTS
T ss_pred CCCEEEEEEEec-CC-----------CCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCccc
Confidence 899999999998 21 11567899999999964321111011 11 128899999999999999
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHHHHHHHCC--CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhh
Q 008371 195 GGISLTSDCFYNGGWTEDLRRVIDYLHCQYP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLI 268 (568)
Q Consensus 195 G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~--~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~ 268 (568)
|.|++..... .....+|..++|+++..+ | +.+|.++|.|++|...+..|+..+. .+++++..++..|...
T Consensus 69 g~S~G~~~~~-~~~e~~D~~d~I~W~~~Q-pws~G~VGm~G~SY~G~~q~~~A~~~~p--~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 69 GGSEGEFDPM-SPNEAQDGYDTIEWIAAQ-PWSNGKVGMYGISYGGFTQWAAAARRPP--HLKAIVPQSGWSDLYR 140 (272)
T ss_dssp TTS-S-B-TT-SHHHHHHHHHHHHHHHHC-TTEEEEEEEEEETHHHHHHHHHHTTT-T--TEEEEEEESE-SBTCC
T ss_pred ccCCCccccC-ChhHHHHHHHHHHHHHhC-CCCCCeEEeeccCHHHHHHHHHHhcCCC--CceEEEecccCCcccc
Confidence 9999764332 334568999999999887 4 4589999999999999999887766 7999999988887765
No 81
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.44 E-value=5.7e-12 Score=122.93 Aligned_cols=110 Identities=18% Similarity=0.205 Sum_probs=81.9
Q ss_pred CCCcEEEEeCCCCCCchhHHHH--HHHHHHHhCCceEEEEcCCCCCCCCCCCC------CCCCCCcHHHHHHHHHHHHHH
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIK--HLAFKMAGHGWNVVVSNHRGLGGISLTSD------CFYNGGWTEDLRRVIDYLHCQ 223 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~--~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~------~~~~~~~~~Dl~~vi~~l~~~ 223 (568)
.+.|+||++||.+++ ...+.. .+...+.+.||.|+++|+||++.+..... .....+...|+..+++++.++
T Consensus 11 ~~~P~vv~lHG~~~~-~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 89 (212)
T TIGR01840 11 GPRALVLALHGCGQT-ASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKAN 89 (212)
T ss_pred CCCCEEEEeCCCCCC-HHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHh
Confidence 568999999998654 334421 35556666899999999999875432110 011123568899999999888
Q ss_pred CC--CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCC
Q 008371 224 YP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (568)
Q Consensus 224 ~~--~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~ 264 (568)
++ ..+++++||||||.+++.++.++++ .+.+++.++++.
T Consensus 90 ~~id~~~i~l~G~S~Gg~~a~~~a~~~p~--~~~~~~~~~g~~ 130 (212)
T TIGR01840 90 YSIDPNRVYVTGLSAGGGMTAVLGCTYPD--VFAGGASNAGLP 130 (212)
T ss_pred cCcChhheEEEEECHHHHHHHHHHHhCch--hheEEEeecCCc
Confidence 74 3589999999999999999999988 788888887654
No 82
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.44 E-value=8.8e-12 Score=126.64 Aligned_cols=129 Identities=16% Similarity=0.171 Sum_probs=81.3
Q ss_pred CCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHH-HH-HHHHHHhCCceEEEEcC--CCCCCCC
Q 008371 123 DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYI-KH-LAFKMAGHGWNVVVSNH--RGLGGIS 198 (568)
Q Consensus 123 DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~-~~-l~~~l~~~Gy~Vvv~D~--RG~G~S~ 198 (568)
.|..+.+..+.|+.. ...+.|+|+++||++++.. .|. .. +...+.+.|+.|+++|. ||+|.+.
T Consensus 23 ~~~~~~~~v~~P~~~------------~~~~~P~vvllHG~~~~~~-~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~ 89 (275)
T TIGR02821 23 CGVPMTFGVFLPPQA------------AAGPVPVLWYLSGLTCTHE-NFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAG 89 (275)
T ss_pred cCCceEEEEEcCCCc------------cCCCCCEEEEccCCCCCcc-HHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCC
Confidence 456677777777531 1235799999999976444 342 22 22334456999999998 6665332
Q ss_pred CCC-------CCCC----------CCCcHHHH-HHHHHHHHHHC--CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEE
Q 008371 199 LTS-------DCFY----------NGGWTEDL-RRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAA 258 (568)
Q Consensus 199 ~~~-------~~~~----------~~~~~~Dl-~~vi~~l~~~~--~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V 258 (568)
... ...| ...+.+.+ .++...+...+ ...+++++||||||.+++.++.++|+ .+++++
T Consensus 90 ~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~--~~~~~~ 167 (275)
T TIGR02821 90 EDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPD--RFKSVS 167 (275)
T ss_pred CcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcc--cceEEE
Confidence 100 0000 01112232 33334444443 34589999999999999999999998 799999
Q ss_pred EEcCCCCh
Q 008371 259 AICSPWDL 266 (568)
Q Consensus 259 ~is~p~d~ 266 (568)
++++..+.
T Consensus 168 ~~~~~~~~ 175 (275)
T TIGR02821 168 AFAPIVAP 175 (275)
T ss_pred EECCccCc
Confidence 98876554
No 83
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.43 E-value=4.4e-12 Score=123.14 Aligned_cols=102 Identities=17% Similarity=0.263 Sum_probs=70.0
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhC--CceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEE
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGH--GWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYA 231 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~--Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~l 231 (568)
.|.++++||+.++.. .|.. ....+... .|+|+++|+||||.|. .. ......+.+|+..+++. ....++++
T Consensus 21 ~~~i~~~hg~~~~~~-~~~~-~~~~~~~~~~~~~~~~~d~~g~g~s~-~~-~~~~~~~~~~~~~~~~~----~~~~~~~l 92 (282)
T COG0596 21 GPPLVLLHGFPGSSS-VWRP-VFKVLPALAARYRVIAPDLRGHGRSD-PA-GYSLSAYADDLAALLDA----LGLEKVVL 92 (282)
T ss_pred CCeEEEeCCCCCchh-hhHH-HHHHhhccccceEEEEecccCCCCCC-cc-cccHHHHHHHHHHHHHH----hCCCceEE
Confidence 458999999976554 3322 21222221 1999999999999997 11 00111124555555553 34446999
Q ss_pred EEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCC
Q 008371 232 VGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (568)
Q Consensus 232 vG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d 265 (568)
+||||||.+++.++.++++ +++++|+++++..
T Consensus 93 ~G~S~Gg~~~~~~~~~~p~--~~~~~v~~~~~~~ 124 (282)
T COG0596 93 VGHSMGGAVALALALRHPD--RVRGLVLIGPAPP 124 (282)
T ss_pred EEecccHHHHHHHHHhcch--hhheeeEecCCCC
Confidence 9999999999999999998 8999999997643
No 84
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.39 E-value=2.2e-12 Score=126.26 Aligned_cols=186 Identities=17% Similarity=0.141 Sum_probs=115.7
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCC-CCCCCCC---CC----C---CCcHHHHHHHHHHH
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG-ISLTSDC---FY----N---GGWTEDLRRVIDYL 220 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~-S~~~~~~---~~----~---~~~~~Dl~~vi~~l 220 (568)
.+.|.||++|++.|-. .+++.+++.|+++||.|+++|+-+-.. ....... .. . ....+|+.++++++
T Consensus 12 ~~~~~Vvv~~d~~G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l 89 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYL 89 (218)
T ss_dssp SSEEEEEEE-BTTBS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 4679999999998744 556889999999999999999765433 1111110 00 0 11236888889999
Q ss_pred HHHC--CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhh
Q 008371 221 HCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQ 298 (568)
Q Consensus 221 ~~~~--~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 298 (568)
+.+. ...+|.++|+|+||.+++.++.+.+ .++++|+.-++.....
T Consensus 90 ~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~---~~~a~v~~yg~~~~~~------------------------------ 136 (218)
T PF01738_consen 90 RAQPEVDPGKIGVVGFCWGGKLALLLAARDP---RVDAAVSFYGGSPPPP------------------------------ 136 (218)
T ss_dssp HCTTTCEEEEEEEEEETHHHHHHHHHHCCTT---TSSEEEEES-SSSGGG------------------------------
T ss_pred HhccccCCCcEEEEEEecchHHhhhhhhhcc---ccceEEEEcCCCCCCc------------------------------
Confidence 8875 3568999999999999999888763 5999998755111100
Q ss_pred hhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcch---HHHh
Q 008371 299 STVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPW---DECR 375 (568)
Q Consensus 299 ~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~---~~~~ 375 (568)
......++++|+++++|++|+.++.+.... .+..
T Consensus 137 -------------------------------------------~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~ 173 (218)
T PF01738_consen 137 -------------------------------------------PLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKA 173 (218)
T ss_dssp -------------------------------------------HHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHC
T ss_pred -------------------------------------------chhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHh
Confidence 011235688999999999999999875332 2334
Q ss_pred cCCCEEEEEeCCCCcccccccccc-Cc---ccHHHHHHHHHHHh
Q 008371 376 ANEKIILATTRHGGHLAFYEGITA-KS---LWWVRAVNVFLDAL 415 (568)
Q Consensus 376 ~~~~~~l~~~~~GGH~~f~eg~~~-~~---~w~~~~i~eFL~~~ 415 (568)
.....++.++++++|--...+... ++ .-..+.+.+||++.
T Consensus 174 ~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 174 AGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp TTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred cCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 578899999999999544332211 11 11226777777654
No 85
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.34 E-value=4.8e-11 Score=125.82 Aligned_cols=250 Identities=13% Similarity=0.160 Sum_probs=141.1
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG 233 (568)
+|.|+++.-+.| ....+.+++++.|.+ |+.|++.|+.--+..+.....+..+++++-+.++++++ + .++.++|
T Consensus 102 ~~pvLiV~Pl~g-~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~----G-~~v~l~G 174 (406)
T TIGR01849 102 GPAVLIVAPMSG-HYATLLRSTVEALLP-DHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL----G-PDIHVIA 174 (406)
T ss_pred CCcEEEEcCCch-HHHHHHHHHHHHHhC-CCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh----C-CCCcEEE
Confidence 367888888865 445667899999999 99999999988776654333333233333334444333 2 3499999
Q ss_pred ecHHHHHHHHHHHhcCC---CCCceEEEEEcCCCChhhhhHHHhH------------HHHH-----------HHHHHHH-
Q 008371 234 TSIGANILVKYLGENGV---NTPLVGAAAICSPWDLLICDRFINR------------RLVQ-----------KCYDRVI- 286 (568)
Q Consensus 234 ~SmGG~ial~ya~~~~~---~~~I~a~V~is~p~d~~~~~~~~~~------------~~~~-----------~~~~~~l- 286 (568)
+|+||..++.+++...+ +.+++.++++++|.|.......+.. .... +.+...+
T Consensus 175 vCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~ 254 (406)
T TIGR01849 175 VCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQ 254 (406)
T ss_pred EchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCCCCcccCHHHH
Confidence 99999998877665432 2269999999999998653111111 0000 0111110
Q ss_pred HH-----HhHhhHHhhhhhhhcc--CChhhhhccCCHHHHHHhhhccc----CCC-CCHHHHHHhCCcc----------c
Q 008371 287 AI-----GLRGFAQLHQSTVARL--ADWEGITKSRSIRDFDNHATRVL----GKF-ETVDAYYRHSSSA----------N 344 (568)
Q Consensus 287 ~~-----~l~~~~~~~~~~~~~~--~d~~~i~~~~~l~~fd~~~~~~~----~g~-~~~~~yy~~~s~~----------~ 344 (568)
.. +..+....+...+... .+.+... ....|.+.+.... ..| ..+.+.|+..... -
T Consensus 255 ~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~---~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~V 331 (406)
T TIGR01849 255 LAGFISMNLDRHTKAHSDFFLHLVKGDGQEAD---KHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRV 331 (406)
T ss_pred HHHHHHcCcchHHHHHHHHHHHHhcCCcchHH---HHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCcEEECCEEe
Confidence 00 0111111111111111 0111111 1111222111100 001 2334445444322 1
Q ss_pred ccCCCc-cceEEEEeCCCCCCCCCCcchH--HH--hcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHH
Q 008371 345 FVRNVS-VPLLCISTLDDPVCTREAIPWD--EC--RANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (568)
Q Consensus 345 ~l~~I~-vPvLiI~G~dDpivp~~~~~~~--~~--~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~ 414 (568)
.+.+|+ +|+|.+.|++|.|+|+.+.... ++ ..+......+.+++||+|.+.|..... .+...|.+||.+
T Consensus 332 dl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~-~i~P~i~~wl~~ 405 (406)
T TIGR01849 332 DPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFRE-EIYPLVREFIRR 405 (406)
T ss_pred cHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhh-hhchHHHHHHHh
Confidence 566898 9999999999999999865442 22 134466778888999999998743222 223788999875
No 86
>PRK10162 acetyl esterase; Provisional
Probab=99.34 E-value=7.3e-11 Score=122.48 Aligned_cols=131 Identities=14% Similarity=0.098 Sum_probs=91.1
Q ss_pred CCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCC--CCchhHHHHHHHHHHHh-CCceEEE
Q 008371 112 ISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT--SDSAAAYIKHLAFKMAG-HGWNVVV 188 (568)
Q Consensus 112 ~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~--G~s~~~y~~~l~~~l~~-~Gy~Vvv 188 (568)
+.-+...+..++| .+.+++|.|.. ...|+||++||.+ .++...+ ..++..+++ .|+.|++
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~~---------------~~~p~vv~~HGGg~~~g~~~~~-~~~~~~la~~~g~~Vv~ 117 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQP---------------DSQATLFYLHGGGFILGNLDTH-DRIMRLLASYSGCTVIG 117 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCCC---------------CCCCEEEEEeCCcccCCCchhh-hHHHHHHHHHcCCEEEE
Confidence 3333445666665 68899988732 2468999999943 1232333 456777776 5999999
Q ss_pred EcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH---C--CCCcEEEEEecHHHHHHHHHHHhcCC----CCCceEEEE
Q 008371 189 SNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ---Y--PEVPLYAVGTSIGANILVKYLGENGV----NTPLVGAAA 259 (568)
Q Consensus 189 ~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~---~--~~~~i~lvG~SmGG~ial~ya~~~~~----~~~I~a~V~ 259 (568)
+|+|.....+. ....+|+.++++++.+. + ...+++++|+|+||++++.++....+ ..++.++++
T Consensus 118 vdYrlape~~~-------p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl 190 (318)
T PRK10162 118 IDYTLSPEARF-------PQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLL 190 (318)
T ss_pred ecCCCCCCCCC-------CCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEE
Confidence 99997554321 22468999999998753 3 24589999999999999988764321 136899999
Q ss_pred EcCCCCh
Q 008371 260 ICSPWDL 266 (568)
Q Consensus 260 is~p~d~ 266 (568)
+++..+.
T Consensus 191 ~~p~~~~ 197 (318)
T PRK10162 191 WYGLYGL 197 (318)
T ss_pred ECCccCC
Confidence 9887765
No 87
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.33 E-value=1.4e-11 Score=133.57 Aligned_cols=108 Identities=13% Similarity=0.119 Sum_probs=84.4
Q ss_pred CcEEEEeCCCCCCchhHHH------HHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCC
Q 008371 154 NPIVVVIPGLTSDSAAAYI------KHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEV 227 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~------~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~ 227 (568)
+..||++|.+- ...|+ ++++++|.++||+|+++|+++-+.... .....++.+.+.++++.+++..+..
T Consensus 215 ~~PLLIVPp~I---NK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r---~~~ldDYv~~i~~Ald~V~~~tG~~ 288 (560)
T TIGR01839 215 ARPLLVVPPQI---NKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHR---EWGLSTYVDALKEAVDAVRAITGSR 288 (560)
T ss_pred CCcEEEechhh---hhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhc---CCCHHHHHHHHHHHHHHHHHhcCCC
Confidence 44578889874 22343 489999999999999999999665431 1112345578999999999988888
Q ss_pred cEEEEEecHHHHHHHH----HHHhcCCCCCceEEEEEcCCCChhh
Q 008371 228 PLYAVGTSIGANILVK----YLGENGVNTPLVGAAAICSPWDLLI 268 (568)
Q Consensus 228 ~i~lvG~SmGG~ial~----ya~~~~~~~~I~a~V~is~p~d~~~ 268 (568)
++.++|+||||.+++. |++.+++ .+|+.++++.++.|+..
T Consensus 289 ~vnl~GyC~GGtl~a~~~a~~aA~~~~-~~V~sltllatplDf~~ 332 (560)
T TIGR01839 289 DLNLLGACAGGLTCAALVGHLQALGQL-RKVNSLTYLVSLLDSTM 332 (560)
T ss_pred CeeEEEECcchHHHHHHHHHHHhcCCC-CceeeEEeeecccccCC
Confidence 9999999999999986 6777663 26999999999999764
No 88
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.31 E-value=1.7e-10 Score=114.36 Aligned_cols=207 Identities=17% Similarity=0.119 Sum_probs=140.9
Q ss_pred EEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCC-
Q 008371 116 RHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGL- 194 (568)
Q Consensus 116 r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~- 194 (568)
...+..+| +.+...+..|.. ....|.||++|++.|-. .+++.+++.++..||.|+++|+-+.
T Consensus 4 ~v~~~~~~-~~~~~~~a~P~~--------------~~~~P~VIv~hei~Gl~--~~i~~~a~rlA~~Gy~v~~Pdl~~~~ 66 (236)
T COG0412 4 DVTIPAPD-GELPAYLARPAG--------------AGGFPGVIVLHEIFGLN--PHIRDVARRLAKAGYVVLAPDLYGRQ 66 (236)
T ss_pred ceEeeCCC-ceEeEEEecCCc--------------CCCCCEEEEEecccCCc--hHHHHHHHHHHhCCcEEEechhhccC
Confidence 34566677 778777877754 23349999999998744 3579999999999999999998873
Q ss_pred CCCCCCC--CC---------CCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEc
Q 008371 195 GGISLTS--DC---------FYNGGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAIC 261 (568)
Q Consensus 195 G~S~~~~--~~---------~~~~~~~~Dl~~vi~~l~~~~--~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is 261 (568)
|.+.... +. ........|+.++++++.++. ...+|.++|+||||.+++.++...++ ++++++.-
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~---v~a~v~fy 143 (236)
T COG0412 67 GDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPE---VKAAVAFY 143 (236)
T ss_pred CCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCC---ccEEEEec
Confidence 3332111 10 000223479999999998764 24579999999999999999988774 88988763
Q ss_pred CCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCC
Q 008371 262 SPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSS 341 (568)
Q Consensus 262 ~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s 341 (568)
+.....
T Consensus 144 g~~~~~-------------------------------------------------------------------------- 149 (236)
T COG0412 144 GGLIAD-------------------------------------------------------------------------- 149 (236)
T ss_pred CCCCCC--------------------------------------------------------------------------
Confidence 321100
Q ss_pred cccccCCCccceEEEEeCCCCCCCCCCcchH---HHhcCCCEEEEEeCCCCccccccc----cccCc---ccHHHHHHHH
Q 008371 342 SANFVRNVSVPLLCISTLDDPVCTREAIPWD---ECRANEKIILATTRHGGHLAFYEG----ITAKS---LWWVRAVNVF 411 (568)
Q Consensus 342 ~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~---~~~~~~~~~l~~~~~GGH~~f~eg----~~~~~---~w~~~~i~eF 411 (568)
......++++|+|++.|+.|+.+|.+..... .......+.+.+++++.|--+-+. ..-++ .-..+.+.+|
T Consensus 150 ~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~f 229 (236)
T COG0412 150 DTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAF 229 (236)
T ss_pred cccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHH
Confidence 0011358999999999999999998754432 222234788999999888554331 01111 1122788888
Q ss_pred HHHhh
Q 008371 412 LDALN 416 (568)
Q Consensus 412 L~~~~ 416 (568)
|.+.+
T Consensus 230 f~~~~ 234 (236)
T COG0412 230 FKRLL 234 (236)
T ss_pred HHHhc
Confidence 88765
No 89
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.30 E-value=2.4e-11 Score=118.00 Aligned_cols=243 Identities=19% Similarity=0.164 Sum_probs=151.7
Q ss_pred CCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEc
Q 008371 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (568)
Q Consensus 111 ~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D 190 (568)
.++--+.+|+..+|..|..+...|... ..+.|.||-.||++|+... + ..+..+ +..||.|+++|
T Consensus 53 ~ve~ydvTf~g~~g~rI~gwlvlP~~~-------------~~~~P~vV~fhGY~g~~g~-~-~~~l~w-a~~Gyavf~Md 116 (321)
T COG3458 53 RVEVYDVTFTGYGGARIKGWLVLPRHE-------------KGKLPAVVQFHGYGGRGGE-W-HDMLHW-AVAGYAVFVMD 116 (321)
T ss_pred ceEEEEEEEeccCCceEEEEEEeeccc-------------CCccceEEEEeeccCCCCC-c-cccccc-cccceeEEEEe
Confidence 344455677778999999866666431 3678999999999876543 2 233333 45699999999
Q ss_pred CCCCCCCCCCC---C------------------CCCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEecHHHHHHHHHHHh
Q 008371 191 HRGLGGISLTS---D------------------CFYNGGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGE 247 (568)
Q Consensus 191 ~RG~G~S~~~~---~------------------~~~~~~~~~Dl~~vi~~l~~~~--~~~~i~lvG~SmGG~ial~ya~~ 247 (568)
-||.|.+.-.+ + ..|..+...|+..+++.+.... ..++|.+.|.|.||.|++..++.
T Consensus 117 vRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal 196 (321)
T COG3458 117 VRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEERIGVTGGSQGGGLALAAAAL 196 (321)
T ss_pred cccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhheEEeccccCchhhhhhhhc
Confidence 99999873211 1 0111223368888888887654 35689999999999999988888
Q ss_pred cCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhccc
Q 008371 248 NGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVL 327 (568)
Q Consensus 248 ~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~ 327 (568)
.+. |++++++-|-..-. .+.+.- .....|. .+..+.+.|.+. .+.+ .+++.-|
T Consensus 197 ~~r---ik~~~~~~Pfl~df--~r~i~~-~~~~~yd-----ei~~y~k~h~~~------e~~v--~~TL~yf-------- 249 (321)
T COG3458 197 DPR---IKAVVADYPFLSDF--PRAIEL-ATEGPYD-----EIQTYFKRHDPK------EAEV--FETLSYF-------- 249 (321)
T ss_pred Chh---hhcccccccccccc--hhheee-cccCcHH-----HHHHHHHhcCch------HHHH--HHHHhhh--------
Confidence 764 88888775533211 111110 0111122 233444444322 0000 1112112
Q ss_pred CCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHH
Q 008371 328 GKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRA 407 (568)
Q Consensus 328 ~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~ 407 (568)
+..+..++|++|+|+.-|..|++||+...-...........+.+++.-+|.+.. ...++.
T Consensus 250 -------------D~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~p-------~~~~~~ 309 (321)
T COG3458 250 -------------DIVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGGP-------GFQSRQ 309 (321)
T ss_pred -------------hhhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccCc-------chhHHH
Confidence 123455789999999999999999998643333344445667777777786532 245577
Q ss_pred HHHHHHHhh
Q 008371 408 VNVFLDALN 416 (568)
Q Consensus 408 i~eFL~~~~ 416 (568)
+..|+..+.
T Consensus 310 ~~~~l~~l~ 318 (321)
T COG3458 310 QVHFLKILF 318 (321)
T ss_pred HHHHHHhhc
Confidence 888887653
No 90
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.24 E-value=3.4e-10 Score=115.59 Aligned_cols=114 Identities=23% Similarity=0.166 Sum_probs=79.3
Q ss_pred CCCcEEEEeCCCCCCchh-H--------HHHHHHHH---HHhCCceEEEEcCCCCC-CCCCCCC---C--CCCC----Cc
Q 008371 152 EKNPIVVVIPGLTSDSAA-A--------YIKHLAFK---MAGHGWNVVVSNHRGLG-GISLTSD---C--FYNG----GW 209 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~-~--------y~~~l~~~---l~~~Gy~Vvv~D~RG~G-~S~~~~~---~--~~~~----~~ 209 (568)
+....|++|||++|+++. . |+..++-. +--..|-|++.|..|.+ +|..++. . .|.. -.
T Consensus 49 ~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~t 128 (368)
T COG2021 49 EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVIT 128 (368)
T ss_pred cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCccc
Confidence 455689999999996542 1 33333221 22234999999999944 6654431 1 1211 12
Q ss_pred HHHHHHHHHHHHHHCCCCcEE-EEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChh
Q 008371 210 TEDLRRVIDYLHCQYPEVPLY-AVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (568)
Q Consensus 210 ~~Dl~~vi~~l~~~~~~~~i~-lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~ 267 (568)
+.|...+-..+.+..+-+++. +||-||||+.++..+..+|+ ++..+|.|++.....
T Consensus 129 i~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd--~V~~~i~ia~~~r~s 185 (368)
T COG2021 129 IRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPD--RVRRAIPIATAARLS 185 (368)
T ss_pred HHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChH--HHhhhheecccccCC
Confidence 356666667777788877876 89999999999999999999 899999998866544
No 91
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.24 E-value=3e-10 Score=111.13 Aligned_cols=182 Identities=20% Similarity=0.164 Sum_probs=99.1
Q ss_pred CCCCCcEEEEeCCCCCCchhHHHHHHHH-HHHhCCceEEEEcCCC------CCCC--CCCCCCCCCC-C--cHHH-----
Q 008371 150 NCEKNPIVVVIPGLTSDSAAAYIKHLAF-KMAGHGWNVVVSNHRG------LGGI--SLTSDCFYNG-G--WTED----- 212 (568)
Q Consensus 150 ~~~~~PvVVllHGl~G~s~~~y~~~l~~-~l~~~Gy~Vvv~D~RG------~G~S--~~~~~~~~~~-~--~~~D----- 212 (568)
.+..+|+||++||+ |++...+ ..+.. .+.....+++.++-+- .|.. .+-....... . ..++
T Consensus 10 ~~~~~~lvi~LHG~-G~~~~~~-~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~ 87 (216)
T PF02230_consen 10 KGKAKPLVILLHGY-GDSEDLF-ALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESA 87 (216)
T ss_dssp SST-SEEEEEE--T-TS-HHHH-HHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHH
T ss_pred CCCCceEEEEECCC-CCCcchh-HHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHH
Confidence 35778999999999 5555333 33333 2233467777775442 1220 1100000000 1 1223
Q ss_pred --HHHHHHHHHHH-CCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHH
Q 008371 213 --LRRVIDYLHCQ-YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIG 289 (568)
Q Consensus 213 --l~~vi~~l~~~-~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~ 289 (568)
+.++++...+. .+..++++.|+|.||++++.++..++. ++.++|++++.......
T Consensus 88 ~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~--~~~gvv~lsG~~~~~~~-------------------- 145 (216)
T PF02230_consen 88 ERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPE--PLAGVVALSGYLPPESE-------------------- 145 (216)
T ss_dssp HHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSS--TSSEEEEES---TTGCC--------------------
T ss_pred HHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCc--CcCEEEEeecccccccc--------------------
Confidence 33333333222 245689999999999999999999988 89999999764322100
Q ss_pred hHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCC-ccceEEEEeCCCCCCCCCC
Q 008371 290 LRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNV-SVPLLCISTLDDPVCTREA 368 (568)
Q Consensus 290 l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I-~vPvLiI~G~dDpivp~~~ 368 (568)
+ ....... ++|++++||.+|+++|.+.
T Consensus 146 -----------------~-----------------------------------~~~~~~~~~~pi~~~hG~~D~vvp~~~ 173 (216)
T PF02230_consen 146 -----------------L-----------------------------------EDRPEALAKTPILIIHGDEDPVVPFEW 173 (216)
T ss_dssp -----------------C-----------------------------------HCCHCCCCTS-EEEEEETT-SSSTHHH
T ss_pred -----------------c-----------------------------------cccccccCCCcEEEEecCCCCcccHHH
Confidence 0 0000111 7899999999999999764
Q ss_pred cch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHh
Q 008371 369 IPW---DECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (568)
Q Consensus 369 ~~~---~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~ 415 (568)
... .+.....++++..++++||-...+ ..+.+.+||++.
T Consensus 174 ~~~~~~~L~~~~~~v~~~~~~g~gH~i~~~--------~~~~~~~~l~~~ 215 (216)
T PF02230_consen 174 AEKTAEFLKAAGANVEFHEYPGGGHEISPE--------ELRDLREFLEKH 215 (216)
T ss_dssp HHHHHHHHHCTT-GEEEEEETT-SSS--HH--------HHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEcCCCCCCCCHH--------HHHHHHHHHhhh
Confidence 332 244555689999999999965333 457788888764
No 92
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.23 E-value=7e-11 Score=125.89 Aligned_cols=112 Identities=13% Similarity=0.158 Sum_probs=83.8
Q ss_pred CCCCcEEEEeCCCCCCc-hhHHHHHHHHHHHh--CCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC--C
Q 008371 151 CEKNPIVVVIPGLTSDS-AAAYIKHLAFKMAG--HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY--P 225 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s-~~~y~~~l~~~l~~--~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~--~ 225 (568)
+..+|++|++||+.++. ...|+..++..+.. ..|+|+++|++|+|.+.......+.....+++.++++++.... +
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~ 117 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYP 117 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCC
Confidence 34678999999997643 24566667776653 3599999999999987654322222223467888888886543 4
Q ss_pred CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCC
Q 008371 226 EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (568)
Q Consensus 226 ~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~ 264 (568)
..++++|||||||.++..++...+. +|.++++++|..
T Consensus 118 l~~VhLIGHSLGAhIAg~ag~~~p~--rV~rItgLDPAg 154 (442)
T TIGR03230 118 WDNVHLLGYSLGAHVAGIAGSLTKH--KVNRITGLDPAG 154 (442)
T ss_pred CCcEEEEEECHHHHHHHHHHHhCCc--ceeEEEEEcCCC
Confidence 5789999999999999998887776 799999998743
No 93
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.22 E-value=1.3e-10 Score=125.36 Aligned_cols=139 Identities=18% Similarity=0.077 Sum_probs=109.0
Q ss_pred CceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeC--CCC---CCchhHHHHHHHH---HHHhCCc
Q 008371 113 SYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIP--GLT---SDSAAAYIKHLAF---KMAGHGW 184 (568)
Q Consensus 113 ~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllH--Gl~---G~s~~~y~~~l~~---~l~~~Gy 184 (568)
-++.+.++|.||.+|+.|.|.|.+ ..+.|+++..+ -.. |.... ...... .++.+||
T Consensus 18 ~~~~v~V~MRDGvrL~~dIy~Pa~--------------~g~~Pvll~~~~~Py~k~~~~~~~--~~~~~p~~~~~aa~GY 81 (563)
T COG2936 18 IERDVMVPMRDGVRLAADIYRPAG--------------AGPLPVLLSRTRLPYRKRNGTFGP--QLSALPQPAWFAAQGY 81 (563)
T ss_pred eeeeeeEEecCCeEEEEEEEccCC--------------CCCCceeEEeeccccccccccCcc--hhhcccccceeecCce
Confidence 446678999999999999999865 36788888888 111 00111 112334 5788999
Q ss_pred eEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH-CCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCC
Q 008371 185 NVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ-YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (568)
Q Consensus 185 ~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~-~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p 263 (568)
.||..|.||.|.|++.-...+. ...+|-.++|+||.++ ..+.++.++|.|++|...+..|+..+. .+++++..++.
T Consensus 82 avV~qDvRG~~~SeG~~~~~~~-~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP--aLkai~p~~~~ 158 (563)
T COG2936 82 AVVNQDVRGRGGSEGVFDPESS-REAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP--ALKAIAPTEGL 158 (563)
T ss_pred EEEEecccccccCCcccceecc-ccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCc--hheeecccccc
Confidence 9999999999999987666555 4678999999999875 357799999999999999999998877 79999999998
Q ss_pred CChhhhh
Q 008371 264 WDLLICD 270 (568)
Q Consensus 264 ~d~~~~~ 270 (568)
.|.....
T Consensus 159 ~D~y~d~ 165 (563)
T COG2936 159 VDRYRDD 165 (563)
T ss_pred ccccccc
Confidence 8876543
No 94
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.21 E-value=5.1e-11 Score=119.84 Aligned_cols=244 Identities=18% Similarity=0.227 Sum_probs=96.2
Q ss_pred CCcEEEEeCCCCCCch-hHHHHHHHHHHHhCCceEEEEcCCC----CCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC---
Q 008371 153 KNPIVVVIPGLTSDSA-AAYIKHLAFKMAGHGWNVVVSNHRG----LGGISLTSDCFYNGGWTEDLRRVIDYLHCQY--- 224 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~-~~y~~~l~~~l~~~Gy~Vvv~D~RG----~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~--- 224 (568)
.+..|||+.|++.+-. -.|+..+++.|.+.||.++-+.++. +|.+++ ...++|+.++|+|++...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL-------~~D~~eI~~~v~ylr~~~~g~ 104 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSL-------DRDVEEIAQLVEYLRSEKGGH 104 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--H-------HHHHHHHHHHHHHHHHHS---
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchh-------hhHHHHHHHHHHHHHHhhccc
Confidence 4567999999975543 4788999999988899999998764 554443 345789999999999883
Q ss_pred -CCCcEEEEEecHHHHHHHHHHHhcCC---CCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhh--h
Q 008371 225 -PEVPLYAVGTSIGANILVKYLGENGV---NTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLH--Q 298 (568)
Q Consensus 225 -~~~~i~lvG~SmGG~ial~ya~~~~~---~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~--~ 298 (568)
...+|+++|||-|..-++.|+..... ..+|+++|+-+|..|-+........ +..+++.+.... ..+... .
T Consensus 105 ~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~---~~~~~~~v~~A~-~~i~~g~~~ 180 (303)
T PF08538_consen 105 FGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGE---REAYEELVALAK-ELIAEGKGD 180 (303)
T ss_dssp ---S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH------HHHHHHHHH-HHHHCT-TT
T ss_pred cCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccc---hHHHHHHHHHHH-HHHHcCCCC
Confidence 46789999999999999999987753 3589999999987766543222111 112222221110 001000 0
Q ss_pred hhhhccCChhhh--hccCCHHHHHHhhhcccCCCCCHHHHHHhC----CcccccCCCccceEEEEeCCCCCCCCCCc---
Q 008371 299 STVARLADWEGI--TKSRSIRDFDNHATRVLGKFETVDAYYRHS----SSANFVRNVSVPLLCISTLDDPVCTREAI--- 369 (568)
Q Consensus 299 ~~~~~~~d~~~i--~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~----s~~~~l~~I~vPvLiI~G~dDpivp~~~~--- 369 (568)
..+.... ...+ ...-+-..|.... ....-++|+... .....+.+|++|+|++.+..|+.+|...-
T Consensus 181 ~~lp~~~-~~~~~~~~PiTA~Rf~SL~-----s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~ 254 (303)
T PF08538_consen 181 EILPREF-TPLVFYDTPITAYRFLSLA-----SPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEA 254 (303)
T ss_dssp -GG-----GGTTT-SS---HHHHHT-S------SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT----------
T ss_pred ceeeccc-cccccCCCcccHHHHHhcc-----CCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceecccccccc
Confidence 0000000 0000 0001111221111 111223333221 12245678899999999999999987521
Q ss_pred --chHHHhcCC---CEEEEEeCCCCccccccccccCcccHHHHHHHHHH
Q 008371 370 --PWDECRANE---KIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLD 413 (568)
Q Consensus 370 --~~~~~~~~~---~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~ 413 (568)
.+.....++ ...-.+++++.|..--++......|+.++|..||+
T Consensus 255 Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 255 LLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp -------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 111111111 12245789999976433211123588899998874
No 95
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.21 E-value=3.2e-11 Score=122.43 Aligned_cols=112 Identities=16% Similarity=0.131 Sum_probs=81.4
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHh-CCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH--CCCC
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAG-HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ--YPEV 227 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~--~~~~ 227 (568)
+..+|++|++||+.++....|...+...+.. .+|+|+++|++|++...............+++..+++++.+. .+..
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~ 112 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLE 112 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChH
Confidence 3457899999999876645555666665544 579999999999843221111000112236888889988776 3456
Q ss_pred cEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCC
Q 008371 228 PLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (568)
Q Consensus 228 ~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~ 264 (568)
++++|||||||.++..++...++ +|.+++.++|..
T Consensus 113 ~i~lIGhSlGa~vAg~~a~~~~~--~v~~iv~LDPa~ 147 (275)
T cd00707 113 NVHLIGHSLGAHVAGFAGKRLNG--KLGRITGLDPAG 147 (275)
T ss_pred HEEEEEecHHHHHHHHHHHHhcC--ccceeEEecCCc
Confidence 89999999999999999998887 799999998754
No 96
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.19 E-value=2.8e-10 Score=130.25 Aligned_cols=227 Identities=15% Similarity=0.110 Sum_probs=131.5
Q ss_pred HHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC----------------CCCcEEEEEecHH
Q 008371 174 HLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY----------------PEVPLYAVGTSIG 237 (568)
Q Consensus 174 ~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~----------------~~~~i~lvG~SmG 237 (568)
.+..+++++||.|++.|.||+|+|++... .+.....+|..++|+|+..+. .+.+|.++|.|+|
T Consensus 270 ~~~~~~~~rGYaVV~~D~RGtg~SeG~~~-~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 270 SLNDYFLPRGFAVVYVSGIGTRGSDGCPT-TGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred hHHHHHHhCCeEEEEEcCCCCCCCCCcCc-cCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 46678899999999999999999987532 222345689999999998531 2569999999999
Q ss_pred HHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHH--HHH----HHHHHHhHhhHHhhhhhhhccCChhhhh
Q 008371 238 ANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQK--CYD----RVIAIGLRGFAQLHQSTVARLADWEGIT 311 (568)
Q Consensus 238 G~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~--~~~----~~l~~~l~~~~~~~~~~~~~~~d~~~i~ 311 (568)
|.+++..|+..++ .++++|.+++..+...... ....+.. .+. ..+....................++..
T Consensus 349 G~~~~~aAa~~pp--~LkAIVp~a~is~~yd~yr--~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~~~~~~~~~~~- 423 (767)
T PRK05371 349 GTLPNAVATTGVE--GLETIIPEAAISSWYDYYR--ENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDYLRHNEACEKL- 423 (767)
T ss_pred HHHHHHHHhhCCC--cceEEEeeCCCCcHHHHhh--cCCceeccCCcCCcchhhHHHHhhhcccCcchhhcchHHHHHH-
Confidence 9999988888776 7999999887665432110 0000000 000 000000000000000000000000000
Q ss_pred ccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCc-chHH--HhcCCCEEEEEeCCC
Q 008371 312 KSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAI-PWDE--CRANEKIILATTRHG 388 (568)
Q Consensus 312 ~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~-~~~~--~~~~~~~~l~~~~~G 388 (568)
+.++...... ......+||+..+....+++|++|+|+|+|..|..++.+.. .... .....+..+.+. .+
T Consensus 424 ----~~~~~~~~~~---~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~g 495 (767)
T PRK05371 424 ----LAELTAAQDR---KTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-QG 495 (767)
T ss_pred ----Hhhhhhhhhh---cCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-CC
Confidence 0001111100 01233477888888888899999999999999999986533 2222 222345666554 56
Q ss_pred CccccccccccCcccHHHHHHHHHHHhhc
Q 008371 389 GHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (568)
Q Consensus 389 GH~~f~eg~~~~~~w~~~~i~eFL~~~~~ 417 (568)
||..... ..+.-+.+.+.+||++.+.
T Consensus 496 ~H~~~~~---~~~~d~~e~~~~Wfd~~Lk 521 (767)
T PRK05371 496 GHVYPNN---WQSIDFRDTMNAWFTHKLL 521 (767)
T ss_pred CccCCCc---hhHHHHHHHHHHHHHhccc
Confidence 8964332 1222355778899987654
No 97
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.18 E-value=2.9e-09 Score=105.17 Aligned_cols=128 Identities=18% Similarity=0.180 Sum_probs=92.2
Q ss_pred EEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCC
Q 008371 117 HLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (568)
Q Consensus 117 ~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~ 196 (568)
..+...+|..+.++-... +..+......+||-+||-+|+..+ + +.+...|.+.|.|++.+|+||+|.
T Consensus 9 ~k~~~~~~~~~~~~a~y~-----------D~~~~gs~~gTVv~~hGsPGSH~D-F-kYi~~~l~~~~iR~I~iN~PGf~~ 75 (297)
T PF06342_consen 9 VKFQAENGKIVTVQAVYE-----------DSLPSGSPLGTVVAFHGSPGSHND-F-KYIRPPLDEAGIRFIGINYPGFGF 75 (297)
T ss_pred EEcccccCceEEEEEEEE-----------ecCCCCCCceeEEEecCCCCCccc-h-hhhhhHHHHcCeEEEEeCCCCCCC
Confidence 345566888877764332 122335566799999999986553 4 788899999999999999999999
Q ss_pred CCCCCCCCCCCCcHHHHHHHHHHHHHHCC-CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCC
Q 008371 197 ISLTSDCFYNGGWTEDLRRVIDYLHCQYP-EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (568)
Q Consensus 197 S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~-~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~ 264 (568)
++......|+. .+-...++.+.++.. ..+++++|||.|+-.|+.++...+ ..++++++++-
T Consensus 76 t~~~~~~~~~n---~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~----~~g~~lin~~G 137 (297)
T PF06342_consen 76 TPGYPDQQYTN---EERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP----LHGLVLINPPG 137 (297)
T ss_pred CCCCcccccCh---HHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc----cceEEEecCCc
Confidence 98765554442 333333333333332 468999999999999999998873 66999998754
No 98
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.08 E-value=9.1e-10 Score=103.63 Aligned_cols=156 Identities=17% Similarity=0.175 Sum_probs=94.9
Q ss_pred EEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEe
Q 008371 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY--PEVPLYAVGT 234 (568)
Q Consensus 157 VVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~--~~~~i~lvG~ 234 (568)
|+++||++|+....|...+.+.+... ++|-..|+ . . -|+.+.++.+.+.. ...++++|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~------~--~---------P~~~~W~~~l~~~i~~~~~~~ilVaH 62 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDW------D--N---------PDLDEWVQALDQAIDAIDEPTILVAH 62 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--------T--S-----------HHHHHHHHHHCCHC-TTTEEEEEE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEecccc------C--C---------CCHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 68999999988888878888888776 88877766 1 1 12333444443332 2457999999
Q ss_pred cHHHHHHHHHHH-hcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhcc
Q 008371 235 SIGANILVKYLG-ENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKS 313 (568)
Q Consensus 235 SmGG~ial~ya~-~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~ 313 (568)
|+|+..+++|++ .... +|.++++++++...... .. .+.
T Consensus 63 SLGc~~~l~~l~~~~~~--~v~g~lLVAp~~~~~~~----~~----------------------~~~------------- 101 (171)
T PF06821_consen 63 SLGCLTALRWLAEQSQK--KVAGALLVAPFDPDDPE----PF----------------------PPE------------- 101 (171)
T ss_dssp THHHHHHHHHHHHTCCS--SEEEEEEES--SCGCHH----CC----------------------TCG-------------
T ss_pred CHHHHHHHHHHhhcccc--cccEEEEEcCCCccccc----ch----------------------hhh-------------
Confidence 999999999995 4444 89999999776321000 00 000
Q ss_pred CCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcccc
Q 008371 314 RSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAF 393 (568)
Q Consensus 314 ~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f 393 (568)
...|.. .....+.+|.++|.++|||++|.+.... .++. =++.++.++++||+.-
T Consensus 102 -------------~~~f~~-----------~p~~~l~~~~~viaS~nDp~vp~~~a~~-~A~~-l~a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 102 -------------LDGFTP-----------LPRDPLPFPSIVIASDNDPYVPFERAQR-LAQR-LGAELIILGGGGHFNA 155 (171)
T ss_dssp -------------GCCCTT-----------SHCCHHHCCEEEEEETTBSSS-HHHHHH-HHHH-HT-EEEEETS-TTSSG
T ss_pred -------------cccccc-----------CcccccCCCeEEEEcCCCCccCHHHHHH-HHHH-cCCCeEECCCCCCccc
Confidence 001110 0112345677999999999999875544 2222 2678999999999987
Q ss_pred cccc
Q 008371 394 YEGI 397 (568)
Q Consensus 394 ~eg~ 397 (568)
-+|.
T Consensus 156 ~~G~ 159 (171)
T PF06821_consen 156 ASGF 159 (171)
T ss_dssp GGTH
T ss_pred ccCC
Confidence 7764
No 99
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.08 E-value=2.8e-09 Score=102.40 Aligned_cols=250 Identities=16% Similarity=0.175 Sum_probs=127.7
Q ss_pred eEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCC
Q 008371 115 KRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGL 194 (568)
Q Consensus 115 ~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~ 194 (568)
..+.+...||.+|.++--.|... ...+.++||+.+|++ -....| ..++++|+..||+|+.+|.--|
T Consensus 3 idhvi~~~~~~~I~vwet~P~~~------------~~~~~~tiliA~Gf~-rrmdh~-agLA~YL~~NGFhViRyDsl~H 68 (294)
T PF02273_consen 3 IDHVIRLEDGRQIRVWETRPKNN------------EPKRNNTILIAPGFA-RRMDHF-AGLAEYLSANGFHVIRYDSLNH 68 (294)
T ss_dssp EEEEEEETTTEEEEEEEE---TT------------S---S-EEEEE-TT--GGGGGG-HHHHHHHHTTT--EEEE---B-
T ss_pred ccceeEcCCCCEEEEeccCCCCC------------CcccCCeEEEecchh-HHHHHH-HHHHHHHhhCCeEEEecccccc
Confidence 35778999999999944333221 134568999999995 455566 6899999999999999999885
Q ss_pred -CCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHH
Q 008371 195 -GGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFI 273 (568)
Q Consensus 195 -G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~ 273 (568)
|.|++....+......+|+..+++|++ ..+..++.++..|+-|-||...+++- .+.-+|..-+-.++...
T Consensus 69 vGlSsG~I~eftms~g~~sL~~V~dwl~-~~g~~~~GLIAaSLSaRIAy~Va~~i----~lsfLitaVGVVnlr~T---- 139 (294)
T PF02273_consen 69 VGLSSGDINEFTMSIGKASLLTVIDWLA-TRGIRRIGLIAASLSARIAYEVAADI----NLSFLITAVGVVNLRDT---- 139 (294)
T ss_dssp ------------HHHHHHHHHHHHHHHH-HTT---EEEEEETTHHHHHHHHTTTS------SEEEEES--S-HHHH----
T ss_pred ccCCCCChhhcchHHhHHHHHHHHHHHH-hcCCCcchhhhhhhhHHHHHHHhhcc----CcceEEEEeeeeeHHHH----
Confidence 777766444433334589999999999 45666899999999999999998854 25556655554444221
Q ss_pred hHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccce
Q 008371 274 NRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPL 353 (568)
Q Consensus 274 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPv 353 (568)
..+.+.. .|+......++...+.+...- .. .-|-. .+.-.++.++.. ..+.++++.+|+
T Consensus 140 --------Le~al~~---Dyl~~~i~~lp~dldfeGh~l-~~-~vFv~--dc~e~~w~~l~S------T~~~~k~l~iP~ 198 (294)
T PF02273_consen 140 --------LEKALGY---DYLQLPIEQLPEDLDFEGHNL-GA-EVFVT--DCFEHGWDDLDS------TINDMKRLSIPF 198 (294)
T ss_dssp --------HHHHHSS----GGGS-GGG--SEEEETTEEE-EH-HHHHH--HHHHTT-SSHHH------HHHHHTT--S-E
T ss_pred --------HHHHhcc---chhhcchhhCCCccccccccc-ch-HHHHH--HHHHcCCccchh------HHHHHhhCCCCE
Confidence 1111111 122222222222222221100 00 01111 111234555433 346778999999
Q ss_pred EEEEeCCCCCCCCCCcchHH-HhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhhc
Q 008371 354 LCISTLDDPVCTREAIPWDE-CRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (568)
Q Consensus 354 LiI~G~dDpivp~~~~~~~~-~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~ 417 (568)
+.+++.+|..|....+.... ...++..++...++.+|-. ..+ ...+..|.+++..
T Consensus 199 iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL-----~en----l~vlrnfy~svtk 254 (294)
T PF02273_consen 199 IAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDL-----GEN----LVVLRNFYQSVTK 254 (294)
T ss_dssp EEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-T-----TSS----HHHHHHHHHHHHH
T ss_pred EEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchh-----hhC----hHHHHHHHHHHHH
Confidence 99999999999766554322 2356789999999999942 112 2556667776653
No 100
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.07 E-value=3.5e-09 Score=95.27 Aligned_cols=168 Identities=16% Similarity=0.164 Sum_probs=119.3
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCC--CCCCCCCCCCcHHHHHHHHHHHHHHCCCCcE
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGIS--LTSDCFYNGGWTEDLRRVIDYLHCQYPEVPL 229 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~--~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i 229 (568)
+..-+||+-||-+++.++..+...+..++.+||.|+.|+++=...-. ...+..-...-......++..++......|+
T Consensus 12 ~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpL 91 (213)
T COG3571 12 PAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPL 91 (213)
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCce
Confidence 34457888999988888999999999999999999999976432211 0001111111223445555566666666799
Q ss_pred EEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhh
Q 008371 230 YAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEG 309 (568)
Q Consensus 230 ~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~ 309 (568)
++-|+||||-++...+.+... +|+++++++-|+...-. .++
T Consensus 92 i~GGkSmGGR~aSmvade~~A--~i~~L~clgYPfhppGK-------------------------------------Pe~ 132 (213)
T COG3571 92 IIGGKSMGGRVASMVADELQA--PIDGLVCLGYPFHPPGK-------------------------------------PEQ 132 (213)
T ss_pred eeccccccchHHHHHHHhhcC--CcceEEEecCccCCCCC-------------------------------------ccc
Confidence 999999999999988888766 69999999877644210 000
Q ss_pred hhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCC
Q 008371 310 ITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGG 389 (568)
Q Consensus 310 i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GG 389 (568)
. ....+..+++|+||.+|+.|++-..+... ....++.++++.++++.
T Consensus 133 ---~----------------------------Rt~HL~gl~tPtli~qGtrD~fGtr~~Va--~y~ls~~iev~wl~~ad 179 (213)
T COG3571 133 ---L----------------------------RTEHLTGLKTPTLITQGTRDEFGTRDEVA--GYALSDPIEVVWLEDAD 179 (213)
T ss_pred ---c----------------------------hhhhccCCCCCeEEeecccccccCHHHHH--hhhcCCceEEEEeccCc
Confidence 0 01336789999999999999998765442 34567889999999999
Q ss_pred cc
Q 008371 390 HL 391 (568)
Q Consensus 390 H~ 391 (568)
|-
T Consensus 180 HD 181 (213)
T COG3571 180 HD 181 (213)
T ss_pred cc
Confidence 94
No 101
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.99 E-value=1.5e-09 Score=88.53 Aligned_cols=60 Identities=25% Similarity=0.412 Sum_probs=47.9
Q ss_pred CCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q 008371 124 GGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLT 200 (568)
Q Consensus 124 Gg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~ 200 (568)
|.+|.+..+.|+. ..+.+|+++||++. ....| ..+++.|+++||.|+++|+||||.|+..
T Consensus 1 G~~L~~~~w~p~~---------------~~k~~v~i~HG~~e-h~~ry-~~~a~~L~~~G~~V~~~D~rGhG~S~g~ 60 (79)
T PF12146_consen 1 GTKLFYRRWKPEN---------------PPKAVVVIVHGFGE-HSGRY-AHLAEFLAEQGYAVFAYDHRGHGRSEGK 60 (79)
T ss_pred CcEEEEEEecCCC---------------CCCEEEEEeCCcHH-HHHHH-HHHHHHHHhCCCEEEEECCCcCCCCCCc
Confidence 4567666665533 26889999999954 44455 8899999999999999999999999853
No 102
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.96 E-value=2.6e-08 Score=102.97 Aligned_cols=130 Identities=16% Similarity=0.072 Sum_probs=91.1
Q ss_pred EcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCC--CCchhHHHHHHHHHHHhCCceEEEEcCCCCCCC
Q 008371 120 QTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT--SDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGI 197 (568)
Q Consensus 120 ~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~--G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S 197 (568)
...++..+.+++|.|.. ......|+||++||.+ .++.......+...+...|+.|+++|||-...-
T Consensus 57 ~~~~~~~~~~~~y~p~~------------~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~ 124 (312)
T COG0657 57 AGPSGDGVPVRVYRPDR------------KAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEH 124 (312)
T ss_pred cCCCCCceeEEEECCCC------------CCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCC
Confidence 44566668899998711 1145689999999832 222333323455666778999999999965433
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHHC-----CCCcEEEEEecHHHHHHHHHHHhcCC--CCCceEEEEEcCCCChhh
Q 008371 198 SLTSDCFYNGGWTEDLRRVIDYLHCQY-----PEVPLYAVGTSIGANILVKYLGENGV--NTPLVGAAAICSPWDLLI 268 (568)
Q Consensus 198 ~~~~~~~~~~~~~~Dl~~vi~~l~~~~-----~~~~i~lvG~SmGG~ial~ya~~~~~--~~~I~a~V~is~p~d~~~ 268 (568)
+ .....+|+.+++.++.++. ...+|+++|+|.||++++.++..-.+ .....+.+++++..+...
T Consensus 125 ~-------~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 125 P-------FPAALEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred C-------CCchHHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 2 2345689999999998763 25689999999999999987655443 235788899988777653
No 103
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.94 E-value=2e-09 Score=104.41 Aligned_cols=102 Identities=21% Similarity=0.134 Sum_probs=71.1
Q ss_pred EEEeCCCC--CCchhHHHHHHHHHHHh-CCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH-----CCCCc
Q 008371 157 VVVIPGLT--SDSAAAYIKHLAFKMAG-HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ-----YPEVP 228 (568)
Q Consensus 157 VVllHGl~--G~s~~~y~~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~-----~~~~~ 228 (568)
||++||.+ .++.... ..++..+++ .|+.|+++|||=.... ......+|+.++++++.+. ++..+
T Consensus 1 v~~~HGGg~~~g~~~~~-~~~~~~la~~~g~~v~~~~Yrl~p~~-------~~p~~~~D~~~a~~~l~~~~~~~~~d~~~ 72 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH-WPFAARLAAERGFVVVSIDYRLAPEA-------PFPAALEDVKAAYRWLLKNADKLGIDPER 72 (211)
T ss_dssp EEEE--STTTSCGTTTH-HHHHHHHHHHHTSEEEEEE---TTTS-------STTHHHHHHHHHHHHHHHTHHHHTEEEEE
T ss_pred CEEECCcccccCChHHH-HHHHHHHHhhccEEEEEeeccccccc-------cccccccccccceeeeccccccccccccc
Confidence 68999843 1222333 456666664 8999999999954322 1234669999999999987 56679
Q ss_pred EEEEEecHHHHHHHHHHHhcCCC--CCceEEEEEcCCCCh
Q 008371 229 LYAVGTSIGANILVKYLGENGVN--TPLVGAAAICSPWDL 266 (568)
Q Consensus 229 i~lvG~SmGG~ial~ya~~~~~~--~~I~a~V~is~p~d~ 266 (568)
|+++|+|.||++++.++....+. ..+++++++++..++
T Consensus 73 i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 73 IVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred eEEeecccccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999999999888654432 258999999997766
No 104
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.94 E-value=6.8e-07 Score=88.45 Aligned_cols=274 Identities=12% Similarity=0.119 Sum_probs=159.3
Q ss_pred ceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHH----HHHHHHHhCCceEEEE
Q 008371 114 YKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIK----HLAFKMAGHGWNVVVS 189 (568)
Q Consensus 114 y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~----~l~~~l~~~Gy~Vvv~ 189 (568)
.+.+.+.+.- |.+....+..+ ++.+|++|=.|.++-++.+.|.. .-+..+.++ |.++-+
T Consensus 22 ~~e~~V~T~~-G~v~V~V~Gd~---------------~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV 84 (326)
T KOG2931|consen 22 CQEHDVETAH-GVVHVTVYGDP---------------KGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHV 84 (326)
T ss_pred ceeeeecccc-ccEEEEEecCC---------------CCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEec
Confidence 4566677765 55666565432 23688899999986544443421 223344555 999999
Q ss_pred cCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhh
Q 008371 190 NHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLIC 269 (568)
Q Consensus 190 D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~ 269 (568)
|-+|+-.-...-+..|.+-..+|+.+.+-.+.+.+.-..++.+|.=.||+|..+||..+|+ +|.|+|+|++-......
T Consensus 85 ~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~--rV~GLvLIn~~~~a~gw 162 (326)
T KOG2931|consen 85 DAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPE--RVLGLVLINCDPCAKGW 162 (326)
T ss_pred CCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChh--heeEEEEEecCCCCchH
Confidence 9999754433334444444557777777766666666789999999999999999999999 99999999886655433
Q ss_pred hHHHhHHHHH-HHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccC-
Q 008371 270 DRFINRRLVQ-KCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVR- 347 (568)
Q Consensus 270 ~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~- 347 (568)
..+...++.. .++..-+......++..|. |.+..... +..-+.++...+... .+-.++..|......+..|.
T Consensus 163 iew~~~K~~s~~l~~~Gmt~~~~d~ll~H~--Fg~e~~~~---~~diVq~Yr~~l~~~-~N~~Nl~~fl~ayn~R~DL~~ 236 (326)
T KOG2931|consen 163 IEWAYNKVSSNLLYYYGMTQGVKDYLLAHH--FGKEELGN---NSDIVQEYRQHLGER-LNPKNLALFLNAYNGRRDLSI 236 (326)
T ss_pred HHHHHHHHHHHHHHhhchhhhHHHHHHHHH--hccccccc---cHHHHHHHHHHHHhc-CChhHHHHHHHHhcCCCCccc
Confidence 3333333322 2233333344444433321 11100000 001112222222221 22233444444433332221
Q ss_pred -------CCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhhc
Q 008371 348 -------NVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (568)
Q Consensus 348 -------~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~ 417 (568)
.++||+|++.|+..|.+..- ..-.......++.++.+.++|=+...+. |. -+.+.+.=|+.-..-
T Consensus 237 ~r~~~~~tlkc~vllvvGd~Sp~~~~v-v~~n~~Ldp~~ttllk~~d~g~l~~e~q--P~--kl~ea~~~FlqG~Gy 308 (326)
T KOG2931|consen 237 ERPKLGTTLKCPVLLVVGDNSPHVSAV-VECNSKLDPTYTTLLKMADCGGLVQEEQ--PG--KLAEAFKYFLQGMGY 308 (326)
T ss_pred cCCCcCccccccEEEEecCCCchhhhh-hhhhcccCcccceEEEEcccCCcccccC--ch--HHHHHHHHHHccCCc
Confidence 45799999999999877532 1111112345688888889887766542 33 377888888876543
No 105
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.94 E-value=8.8e-09 Score=99.86 Aligned_cols=211 Identities=13% Similarity=0.116 Sum_probs=112.7
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH----CCCC
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ----YPEV 227 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~----~~~~ 227 (568)
..++.++.+|=- |++.+.| +.+...+.. -+.++++.++|+|.--.. ....|+..+++.+... +..+
T Consensus 5 ~~~~~L~cfP~A-GGsa~~f-r~W~~~lp~-~iel~avqlPGR~~r~~e-------p~~~di~~Lad~la~el~~~~~d~ 74 (244)
T COG3208 5 GARLRLFCFPHA-GGSASLF-RSWSRRLPA-DIELLAVQLPGRGDRFGE-------PLLTDIESLADELANELLPPLLDA 74 (244)
T ss_pred CCCceEEEecCC-CCCHHHH-HHHHhhCCc-hhheeeecCCCcccccCC-------cccccHHHHHHHHHHHhccccCCC
Confidence 456678888855 4456556 778777754 589999999999864322 1235555555555443 4567
Q ss_pred cEEEEEecHHHHHHHHHHHhcCCC-CCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCC
Q 008371 228 PLYAVGTSIGANILVKYLGENGVN-TPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLAD 306 (568)
Q Consensus 228 ~i~lvG~SmGG~ial~ya~~~~~~-~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d 306 (568)
|+.++||||||+++...|.+.... ....++.+.+...........+.. .-+..+...++.+-..
T Consensus 75 P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~-----~~D~~~l~~l~~lgG~---------- 139 (244)
T COG3208 75 PFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHH-----LDDADFLADLVDLGGT---------- 139 (244)
T ss_pred CeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccC-----CCHHHHHHHHHHhCCC----------
Confidence 999999999999999988765432 135555554432211111011100 0011111111111000
Q ss_pred hhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeC
Q 008371 307 WEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTR 386 (568)
Q Consensus 307 ~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~ 386 (568)
...+.....+.++---+.+ ..|.-.+.|- . ..-..+++|+.++.|++|+.+..+.+............+.+++
T Consensus 140 p~e~led~El~~l~LPilR--AD~~~~e~Y~-~----~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd 212 (244)
T COG3208 140 PPELLEDPELMALFLPILR--ADFRALESYR-Y----PPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD 212 (244)
T ss_pred ChHHhcCHHHHHHHHHHHH--HHHHHhcccc-c----CCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec
Confidence 0001011111111000000 0011111110 0 1114789999999999999999886663344556678888886
Q ss_pred CCCcccccc
Q 008371 387 HGGHLAFYE 395 (568)
Q Consensus 387 ~GGH~~f~e 395 (568)
|||+-..+
T Consensus 213 -GgHFfl~~ 220 (244)
T COG3208 213 -GGHFFLNQ 220 (244)
T ss_pred -Ccceehhh
Confidence 79975544
No 106
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.93 E-value=3.2e-08 Score=97.98 Aligned_cols=104 Identities=20% Similarity=0.228 Sum_probs=80.2
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC------
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY------ 224 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~------ 224 (568)
.+.-|+|||+||+. ...++| ..+.++++.+||.||.+|+...+.... ....+++.++++|+.+..
T Consensus 14 ~g~yPVv~f~~G~~-~~~s~Y-s~ll~hvAShGyIVV~~d~~~~~~~~~-------~~~~~~~~~vi~Wl~~~L~~~l~~ 84 (259)
T PF12740_consen 14 AGTYPVVLFLHGFL-LINSWY-SQLLEHVASHGYIVVAPDLYSIGGPDD-------TDEVASAAEVIDWLAKGLESKLPL 84 (259)
T ss_pred CCCcCEEEEeCCcC-CCHHHH-HHHHHHHHhCceEEEEecccccCCCCc-------chhHHHHHHHHHHHHhcchhhccc
Confidence 45689999999996 566666 789999999999999999776544211 234578899999976632
Q ss_pred ----CCCcEEEEEecHHHHHHHHHHHhcCC---CCCceEEEEEcCC
Q 008371 225 ----PEVPLYAVGTSIGANILVKYLGENGV---NTPLVGAAAICSP 263 (568)
Q Consensus 225 ----~~~~i~lvG~SmGG~ial~ya~~~~~---~~~I~a~V~is~p 263 (568)
...++.+.|||-||-++..++....+ ..+++++++++|.
T Consensus 85 ~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPV 130 (259)
T PF12740_consen 85 GVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPV 130 (259)
T ss_pred cccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccc
Confidence 13479999999999999988877632 2379999999764
No 107
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.92 E-value=1.7e-08 Score=108.04 Aligned_cols=249 Identities=20% Similarity=0.153 Sum_probs=155.0
Q ss_pred hHHhhhhhh--cCCCCCCceE-EE--EEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCc-----
Q 008371 98 LQTAFLTFF--GRAPDISYKR-HL--FQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDS----- 167 (568)
Q Consensus 98 lqT~~~~~~--~~~p~~~y~r-~~--~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s----- 167 (568)
-|+-+.... +.++.+.|.. ++ |..+.|.++..-.+.|.+.+ ...+-|+|+++-|.++-.
T Consensus 592 ~q~~~~~~l~~~~~~~Pdy~p~eif~fqs~tg~~lYgmiyKPhn~~-----------pgkkYptvl~VYGGP~VQlVnns 660 (867)
T KOG2281|consen 592 KQVSFWAILVSGAPPPPDYVPPEIFSFQSKTGLTLYGMIYKPHNFQ-----------PGKKYPTVLNVYGGPGVQLVNNS 660 (867)
T ss_pred chhhHHHHHHhcCCCCCccCChhheeeecCCCcEEEEEEEccccCC-----------CCCCCceEEEEcCCCceEEeecc
Confidence 354443332 3444455554 33 47767777877788876532 235689999999965421
Q ss_pred --hhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCC--CCCCC--cHHHHHHHHHHHHHHCC---CCcEEEEEecHHH
Q 008371 168 --AAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDC--FYNGG--WTEDLRRVIDYLHCQYP---EVPLYAVGTSIGA 238 (568)
Q Consensus 168 --~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~--~~~~~--~~~Dl~~vi~~l~~~~~---~~~i~lvG~SmGG 238 (568)
.-.|++ ...|+..||.|+++|.||...-...-.. -..-| .++|-.+-++++.++++ -.++.+-|+|+||
T Consensus 661 fkgi~ylR--~~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGG 738 (867)
T KOG2281|consen 661 FKGIQYLR--FCRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGG 738 (867)
T ss_pred ccceehhh--hhhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEecccccc
Confidence 112322 3457789999999999995443322111 11112 34799999999999874 4689999999999
Q ss_pred HHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHH
Q 008371 239 NILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRD 318 (568)
Q Consensus 239 ~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~ 318 (568)
.+++..+.++|+ -++++|+= +|..... .|
T Consensus 739 YLSlm~L~~~P~--IfrvAIAG-apVT~W~------------~Y------------------------------------ 767 (867)
T KOG2281|consen 739 YLSLMGLAQYPN--IFRVAIAG-APVTDWR------------LY------------------------------------ 767 (867)
T ss_pred HHHHHHhhcCcc--eeeEEecc-Ccceeee------------ee------------------------------------
Confidence 999999999998 55666653 3332210 11
Q ss_pred HHHhhhcccCCCC-CHHHHHHhCCccccc---CCCccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCcc
Q 008371 319 FDNHATRVLGKFE-TVDAYYRHSSSANFV---RNVSVPLLCISTLDDPVCTREAIPW---DECRANEKIILATTRHGGHL 391 (568)
Q Consensus 319 fd~~~~~~~~g~~-~~~~yy~~~s~~~~l---~~I~vPvLiI~G~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~ 391 (568)
|..+|.+..|+. .-+.-|...|....+ ++=.-.+|++||--|.-|...+... .+.++.+.-++.++|+--|.
T Consensus 768 -DTgYTERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHs 846 (867)
T KOG2281|consen 768 -DTGYTERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHS 846 (867)
T ss_pred -cccchhhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccc
Confidence 112222223333 222233333333333 3335568999999999888764443 35677888999999999996
Q ss_pred ccccccccCcccHHHHHHHHHHH
Q 008371 392 AFYEGITAKSLWWVRAVNVFLDA 414 (568)
Q Consensus 392 ~f~eg~~~~~~w~~~~i~eFL~~ 414 (568)
.=.. .....++..+..|+++
T Consensus 847 iR~~---es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 847 IRNP---ESGIYYEARLLHFLQE 866 (867)
T ss_pred cCCC---ccchhHHHHHHHHHhh
Confidence 4211 1234678899999874
No 108
>COG0400 Predicted esterase [General function prediction only]
Probab=98.91 E-value=3.1e-08 Score=95.68 Aligned_cols=177 Identities=18% Similarity=0.152 Sum_probs=109.0
Q ss_pred cCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCC----CCCC---CCCCCC-CC---cHHHHHHHH
Q 008371 149 LNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG----ISLT---SDCFYN-GG---WTEDLRRVI 217 (568)
Q Consensus 149 ~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~----S~~~---~~~~~~-~~---~~~Dl~~vi 217 (568)
+.++..|+||++||++| ....++. +.+.... .+.++. .||-=. -... ....+. .+ .++.+.+.+
T Consensus 13 ~~~p~~~~iilLHG~Gg-de~~~~~-~~~~~~P-~~~~is--~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l 87 (207)
T COG0400 13 PGDPAAPLLILLHGLGG-DELDLVP-LPELILP-NATLVS--PRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFL 87 (207)
T ss_pred CCCCCCcEEEEEecCCC-Chhhhhh-hhhhcCC-CCeEEc--CCCCccccCcccceeecCCCccchhhHHHHHHHHHHHH
Confidence 34567889999999965 4444533 4444443 344443 344211 1100 011111 01 113444555
Q ss_pred HHHHHHCC--CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHH
Q 008371 218 DYLHCQYP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQ 295 (568)
Q Consensus 218 ~~l~~~~~--~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 295 (568)
+.+..+++ ..+++++|||-||++++..+..++. .++++|+.++.......
T Consensus 88 ~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~--~~~~ail~~g~~~~~~~-------------------------- 139 (207)
T COG0400 88 EELAEEYGIDSSRIILIGFSQGANIALSLGLTLPG--LFAGAILFSGMLPLEPE-------------------------- 139 (207)
T ss_pred HHHHHHhCCChhheEEEecChHHHHHHHHHHhCch--hhccchhcCCcCCCCCc--------------------------
Confidence 55555554 4789999999999999999999988 78999887653322100
Q ss_pred hhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcch---H
Q 008371 296 LHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPW---D 372 (568)
Q Consensus 296 ~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~---~ 372 (568)
..-..-.+|+++++|..||+||....+. .
T Consensus 140 ------------------------------------------------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~ 171 (207)
T COG0400 140 ------------------------------------------------LLPDLAGTPILLSHGTEDPVVPLALAEALAEY 171 (207)
T ss_pred ------------------------------------------------cccccCCCeEEEeccCcCCccCHHHHHHHHHH
Confidence 0001235799999999999999774433 3
Q ss_pred HHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHh
Q 008371 373 ECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (568)
Q Consensus 373 ~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~ 415 (568)
+.....++....++ +||-.-.| ..+.+.+|+...
T Consensus 172 l~~~g~~v~~~~~~-~GH~i~~e--------~~~~~~~wl~~~ 205 (207)
T COG0400 172 LTASGADVEVRWHE-GGHEIPPE--------ELEAARSWLANT 205 (207)
T ss_pred HHHcCCCEEEEEec-CCCcCCHH--------HHHHHHHHHHhc
Confidence 45567788888888 99965333 446667777653
No 109
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.91 E-value=4.3e-08 Score=112.18 Aligned_cols=256 Identities=17% Similarity=0.127 Sum_probs=159.9
Q ss_pred CCchhhHHhhhhhhcCCCCCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCch--hH
Q 008371 93 LSSPHLQTAFLTFFGRAPDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSA--AA 170 (568)
Q Consensus 93 l~~ghlqT~~~~~~~~~p~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~--~~ 170 (568)
..|..++.....+ .-|..++++..+ ||.+..+....|++.+ ...+-|+++.+||.+++.. ..
T Consensus 481 e~n~~~~~~~~~~--~~p~~~~~~i~~---~~~~~~~~~~lP~~~~-----------~~~kyPllv~~yGGP~sq~v~~~ 544 (755)
T KOG2100|consen 481 ETNEELKKTIENV--ALPIVEFGKIEI---DGITANAILILPPNFD-----------PSKKYPLLVVVYGGPGSQSVTSK 544 (755)
T ss_pred ccChhhHHHhhcc--cCCcceeEEEEe---ccEEEEEEEecCCCCC-----------CCCCCCEEEEecCCCCcceeeee
Confidence 3444554444311 123445554444 8888888777776532 2347799999999876211 11
Q ss_pred HHHHHHH-HHHhCCceEEEEcCCCCCCCCCCC----CCCCCCCcHHHHHHHHHHHHHHC--CCCcEEEEEecHHHHHHHH
Q 008371 171 YIKHLAF-KMAGHGWNVVVSNHRGLGGISLTS----DCFYNGGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVK 243 (568)
Q Consensus 171 y~~~l~~-~l~~~Gy~Vvv~D~RG~G~S~~~~----~~~~~~~~~~Dl~~vi~~l~~~~--~~~~i~lvG~SmGG~ial~ 243 (568)
+.-.+.. .+...|+.|+.+|.||-|+....- .+....-..+|...++.++.+.. ...++.++|+|.||.++++
T Consensus 545 ~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~ 624 (755)
T KOG2100|consen 545 FSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLK 624 (755)
T ss_pred EEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHH
Confidence 1112223 356789999999999988654321 11111234578888888887764 3458999999999999999
Q ss_pred HHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhh
Q 008371 244 YLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHA 323 (568)
Q Consensus 244 ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~ 323 (568)
.++..+.. -++++++++|..+..-.. .. .
T Consensus 625 ~l~~~~~~-~fkcgvavaPVtd~~~yd-------------s~-------------------------------------~ 653 (755)
T KOG2100|consen 625 LLESDPGD-VFKCGVAVAPVTDWLYYD-------------ST-------------------------------------Y 653 (755)
T ss_pred HhhhCcCc-eEEEEEEecceeeeeeec-------------cc-------------------------------------c
Confidence 99998741 467779998877653110 00 0
Q ss_pred hcccCCCCCH-HHHHHhCCcccccCCCccce-EEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccc
Q 008371 324 TRVLGKFETV-DAYYRHSSSANFVRNVSVPL-LCISTLDDPVCTREAIPW---DECRANEKIILATTRHGGHLAFYEGIT 398 (568)
Q Consensus 324 ~~~~~g~~~~-~~yy~~~s~~~~l~~I~vPv-LiI~G~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~f~eg~~ 398 (568)
+....|.... ..-|...+....+..++.|. |+|||+.|.-|+.+.... .+....-...+.++|+.+|-....
T Consensus 654 terymg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is~~--- 730 (755)
T KOG2100|consen 654 TERYMGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGISYV--- 730 (755)
T ss_pred cHhhcCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccccc---
Confidence 0000111110 11155666677778888777 999999999998773322 233344449999999999965432
Q ss_pred cCcccHHHHHHHHHHHhhcC
Q 008371 399 AKSLWWVRAVNVFLDALNTS 418 (568)
Q Consensus 399 ~~~~w~~~~i~eFL~~~~~~ 418 (568)
....-+...+..|+......
T Consensus 731 ~~~~~~~~~~~~~~~~~~~~ 750 (755)
T KOG2100|consen 731 EVISHLYEKLDRFLRDCFGS 750 (755)
T ss_pred cchHHHHHHHHHHHHHHcCc
Confidence 11235668888998865543
No 110
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.88 E-value=1e-08 Score=115.81 Aligned_cols=95 Identities=19% Similarity=0.200 Sum_probs=71.6
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCC---------CCC--CC-C--------CC---c
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLT---------SDC--FY-N--------GG---W 209 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~---------~~~--~~-~--------~~---~ 209 (568)
..|+||++||++++. ..| ..+++.|.++||+|+++|+||||.+... ... .| + .+ .
T Consensus 448 g~P~VVllHG~~g~~-~~~-~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~ 525 (792)
T TIGR03502 448 GWPVVIYQHGITGAK-ENA-LAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQS 525 (792)
T ss_pred CCcEEEEeCCCCCCH-HHH-HHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHH
Confidence 457999999997754 445 6799999989999999999999998543 111 11 1 12 2
Q ss_pred HHHHHHHHHHHH------HH------CCCCcEEEEEecHHHHHHHHHHHhcC
Q 008371 210 TEDLRRVIDYLH------CQ------YPEVPLYAVGTSIGANILVKYLGENG 249 (568)
Q Consensus 210 ~~Dl~~vi~~l~------~~------~~~~~i~lvG~SmGG~ial~ya~~~~ 249 (568)
+.|+..+...+. .. ++..+++++||||||.++..|+....
T Consensus 526 v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 526 ILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred HHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcC
Confidence 368888888777 22 56779999999999999999997643
No 111
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.87 E-value=2.5e-08 Score=102.37 Aligned_cols=117 Identities=19% Similarity=0.182 Sum_probs=81.9
Q ss_pred CCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCC--CCCCCCCC
Q 008371 124 GGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG--LGGISLTS 201 (568)
Q Consensus 124 Gg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG--~G~S~~~~ 201 (568)
++.+.++.+.+....+ .-.....|+|++-||.+ ++...+ ..+++.+++.||.|.++|++| .|+.+...
T Consensus 49 ~~~~~v~~~~p~~~~~--------~~~~~~~PlvvlshG~G-s~~~~f-~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~ 118 (365)
T COG4188 49 DRERPVDLRLPQGGTG--------TVALYLLPLVVLSHGSG-SYVTGF-AWLAEHLASYGFVVAAPDHPGSNAGGAPAAY 118 (365)
T ss_pred CCccccceeccCCCcc--------ccccCcCCeEEecCCCC-CCccch-hhhHHHHhhCceEEEeccCCCcccccCChhh
Confidence 5666777666544210 01124689999999995 455555 679999999999999999999 45544221
Q ss_pred CCC--CC----CCcHHHHHHHHHHHHHH-----C----CCCcEEEEEecHHHHHHHHHHHhcCC
Q 008371 202 DCF--YN----GGWTEDLRRVIDYLHCQ-----Y----PEVPLYAVGTSIGANILVKYLGENGV 250 (568)
Q Consensus 202 ~~~--~~----~~~~~Dl~~vi~~l~~~-----~----~~~~i~lvG~SmGG~ial~ya~~~~~ 250 (568)
... +. .+...|+..+++++.+. . ...+|.++|||+||..++..++.+.+
T Consensus 119 ~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 119 AGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred cCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhcccccc
Confidence 110 11 12347999999999877 1 13479999999999999988877654
No 112
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.85 E-value=3.3e-09 Score=109.40 Aligned_cols=133 Identities=17% Similarity=0.140 Sum_probs=78.3
Q ss_pred eEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHH-----------------HHHHHH
Q 008371 115 KRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAY-----------------IKHLAF 177 (568)
Q Consensus 115 ~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y-----------------~~~l~~ 177 (568)
++..|.+.++..+....+.|... ..+.|.||++||-+++. +.. -..++.
T Consensus 89 EKv~f~~~p~~~vpaylLvPd~~-------------~~p~PAVL~lHgHg~~K-e~~~g~~gv~~~~~~~~~~~~~~~g~ 154 (390)
T PF12715_consen 89 EKVEFNTTPGSRVPAYLLVPDGA-------------KGPFPAVLCLHGHGGGK-EKMAGEDGVSPDLKDDYDDPKQDYGD 154 (390)
T ss_dssp EEEEE--STTB-EEEEEEEETT---------------S-EEEEEEE--TT--H-HHHCT---SSGCG--STTSTTT-HHH
T ss_pred EEEEEEccCCeeEEEEEEecCCC-------------CCCCCEEEEeCCCCCCc-ccccCCcccccccchhhccccccHHH
Confidence 33455666777787777776442 45679999999975532 221 124678
Q ss_pred HHHhCCceEEEEcCCCCCCCCCCCCCC--CC------------CCc------HHHHHHHHHHHHHHC--CCCcEEEEEec
Q 008371 178 KMAGHGWNVVVSNHRGLGGISLTSDCF--YN------------GGW------TEDLRRVIDYLHCQY--PEVPLYAVGTS 235 (568)
Q Consensus 178 ~l~~~Gy~Vvv~D~RG~G~S~~~~~~~--~~------------~~~------~~Dl~~vi~~l~~~~--~~~~i~lvG~S 235 (568)
+|+++||.|+++|.+|+|......... .+ -|+ +.|...+++|+..+- ...+|.++|+|
T Consensus 155 ~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfS 234 (390)
T PF12715_consen 155 QLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFS 234 (390)
T ss_dssp HHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEG
T ss_pred HHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeec
Confidence 899999999999999999754322111 11 111 135566889987653 24589999999
Q ss_pred HHHHHHHHHHHhcCCCCCceEEEEEcCCC
Q 008371 236 IGANILVKYLGENGVNTPLVGAAAICSPW 264 (568)
Q Consensus 236 mGG~ial~ya~~~~~~~~I~a~V~is~p~ 264 (568)
|||..++.+++..+ +|+++|+.+...
T Consensus 235 mGg~~a~~LaALDd---RIka~v~~~~l~ 260 (390)
T PF12715_consen 235 MGGYRAWWLAALDD---RIKATVANGYLC 260 (390)
T ss_dssp GGHHHHHHHHHH-T---T--EEEEES-B-
T ss_pred ccHHHHHHHHHcch---hhHhHhhhhhhh
Confidence 99999998888865 499988876543
No 113
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.84 E-value=2.6e-08 Score=94.81 Aligned_cols=159 Identities=18% Similarity=0.172 Sum_probs=109.2
Q ss_pred cEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCC-CCCCCCCC--CC------CCCCCCcHHHHHHHHHHHHHHCC
Q 008371 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR-GLGGISLT--SD------CFYNGGWTEDLRRVIDYLHCQYP 225 (568)
Q Consensus 155 PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~R-G~G~S~~~--~~------~~~~~~~~~Dl~~vi~~l~~~~~ 225 (568)
..||++--+.|-+... .+..+..++..||.|+++|+- |=-.++.. +. +........|+..++++|+.+.+
T Consensus 40 ~~li~i~DvfG~~~~n-~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~ 118 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPN-TREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGD 118 (242)
T ss_pred eEEEEEEeeeccccHH-HHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCC
Confidence 4566666555654433 488999999999999999964 41112110 00 11112234799999999998887
Q ss_pred CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccC
Q 008371 226 EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLA 305 (568)
Q Consensus 226 ~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 305 (568)
..+|.++|+.|||.++..+....++ +.++++.-+.+
T Consensus 119 ~kkIGv~GfCwGak~vv~~~~~~~~---f~a~v~~hps~----------------------------------------- 154 (242)
T KOG3043|consen 119 SKKIGVVGFCWGAKVVVTLSAKDPE---FDAGVSFHPSF----------------------------------------- 154 (242)
T ss_pred cceeeEEEEeecceEEEEeeccchh---heeeeEecCCc-----------------------------------------
Confidence 8899999999999999988887765 77777652211
Q ss_pred ChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHH--HhcCCC--EE
Q 008371 306 DWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDE--CRANEK--II 381 (568)
Q Consensus 306 d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~--~~~~~~--~~ 381 (568)
.+ ...+.++++|+|++.|+.|+++|++.....+ .+.++. .+
T Consensus 155 -------------------------~d----------~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~ 199 (242)
T KOG3043|consen 155 -------------------------VD----------SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQ 199 (242)
T ss_pred -------------------------CC----------hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCccccee
Confidence 00 1224678899999999999999988554322 223333 46
Q ss_pred EEEeCCCCccccc
Q 008371 382 LATTRHGGHLAFY 394 (568)
Q Consensus 382 l~~~~~GGH~~f~ 394 (568)
+.++++-|| ||.
T Consensus 200 v~~f~g~~H-Gf~ 211 (242)
T KOG3043|consen 200 VKTFSGVGH-GFV 211 (242)
T ss_pred EEEcCCccc-hhh
Confidence 889999999 444
No 114
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.82 E-value=1.6e-07 Score=92.12 Aligned_cols=103 Identities=19% Similarity=0.144 Sum_probs=75.6
Q ss_pred EEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEec
Q 008371 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTS 235 (568)
Q Consensus 156 vVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~S 235 (568)
+|+++||.+| +...| ..+++.+...++.|+.++++|.+.... ......+=+...++.|+...+..|+.++|||
T Consensus 2 ~lf~~p~~gG-~~~~y-~~la~~l~~~~~~v~~i~~~~~~~~~~-----~~~si~~la~~y~~~I~~~~~~gp~~L~G~S 74 (229)
T PF00975_consen 2 PLFCFPPAGG-SASSY-RPLARALPDDVIGVYGIEYPGRGDDEP-----PPDSIEELASRYAEAIRARQPEGPYVLAGWS 74 (229)
T ss_dssp EEEEESSTTC-SGGGG-HHHHHHHTTTEEEEEEECSTTSCTTSH-----EESSHHHHHHHHHHHHHHHTSSSSEEEEEET
T ss_pred eEEEEcCCcc-CHHHH-HHHHHhCCCCeEEEEEEecCCCCCCCC-----CCCCHHHHHHHHHHHhhhhCCCCCeeehccC
Confidence 5899999976 45566 789999876558999999999973221 1122334456677788888888899999999
Q ss_pred HHHHHHHHHHHhcCC-CCCceEEEEEcCCCC
Q 008371 236 IGANILVKYLGENGV-NTPLVGAAAICSPWD 265 (568)
Q Consensus 236 mGG~ial~ya~~~~~-~~~I~a~V~is~p~d 265 (568)
+||.+|..+|.+-.+ ...+..+++++++..
T Consensus 75 ~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p 105 (229)
T PF00975_consen 75 FGGILAFEMARQLEEAGEEVSRLILIDSPPP 105 (229)
T ss_dssp HHHHHHHHHHHHHHHTT-SESEEEEESCSST
T ss_pred ccHHHHHHHHHHHHHhhhccCceEEecCCCC
Confidence 999999988765422 126999999996543
No 115
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.82 E-value=4.8e-07 Score=91.47 Aligned_cols=107 Identities=20% Similarity=0.307 Sum_probs=78.8
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhC---CceEEEEcCCCCCCCCCCC-----CCCCCCCcHHHHHHHHHHHHH---
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGH---GWNVVVSNHRGLGGISLTS-----DCFYNGGWTEDLRRVIDYLHC--- 222 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~---Gy~Vvv~D~RG~G~S~~~~-----~~~~~~~~~~Dl~~vi~~l~~--- 222 (568)
++.++++||.+|- - .|+..+...|.++ .|.|++..+.||-.++... .+. .+..+.+...++.+++
T Consensus 2 ~~li~~IPGNPGl-v-~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~--~sL~~QI~hk~~~i~~~~~ 77 (266)
T PF10230_consen 2 RPLIVFIPGNPGL-V-EFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRL--FSLQDQIEHKIDFIKELIP 77 (266)
T ss_pred cEEEEEECCCCCh-H-HHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCc--cCHHHHHHHHHHHHHHHhh
Confidence 5689999999983 3 4457788888754 7999999999998776541 122 2233445555554443
Q ss_pred HC--CCCcEEEEEecHHHHHHHHHHHhcC-CCCCceEEEEEcCCC
Q 008371 223 QY--PEVPLYAVGTSIGANILVKYLGENG-VNTPLVGAAAICSPW 264 (568)
Q Consensus 223 ~~--~~~~i~lvG~SmGG~ial~ya~~~~-~~~~I~a~V~is~p~ 264 (568)
.+ +..+++++|||+|+.|+++.+.+.+ ...+|++++++.|..
T Consensus 78 ~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 78 QKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred hhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 33 5678999999999999999999998 334799999998754
No 116
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.80 E-value=1.9e-07 Score=95.55 Aligned_cols=107 Identities=14% Similarity=0.137 Sum_probs=79.1
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHH-HHHHHhCCceEEEEcCCCCCCCCCCCCCCCC-----------CCcHHHHHHHHHH
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHL-AFKMAGHGWNVVVSNHRGLGGISLTSDCFYN-----------GGWTEDLRRVIDY 219 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l-~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~-----------~~~~~Dl~~vi~~ 219 (568)
+.+|++|.++|. |+..-+.-+.+ +..|.++|+..+++..+=||.-......... .....+...+++|
T Consensus 90 ~~rp~~IhLagT-GDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~W 168 (348)
T PF09752_consen 90 PYRPVCIHLAGT-GDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHW 168 (348)
T ss_pred CCCceEEEecCC-CccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHH
Confidence 468999999997 55544443455 8889999999999999999865432111110 1123678888999
Q ss_pred HHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcC
Q 008371 220 LHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICS 262 (568)
Q Consensus 220 l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~ 262 (568)
+..+ +..++.+.|.||||.+|...++..|. ++..+-++++
T Consensus 169 l~~~-G~~~~g~~G~SmGG~~A~laa~~~p~--pv~~vp~ls~ 208 (348)
T PF09752_consen 169 LERE-GYGPLGLTGISMGGHMAALAASNWPR--PVALVPCLSW 208 (348)
T ss_pred HHhc-CCCceEEEEechhHhhHHhhhhcCCC--ceeEEEeecc
Confidence 9888 67799999999999999998988888 5665555554
No 117
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.78 E-value=5.2e-07 Score=93.37 Aligned_cols=253 Identities=12% Similarity=0.065 Sum_probs=138.7
Q ss_pred EEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCC---CCchhHHHHHHHHHH-HhCCceEEEEcCCCC
Q 008371 119 FQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT---SDSAAAYIKHLAFKM-AGHGWNVVVSNHRGL 194 (568)
Q Consensus 119 ~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~---G~s~~~y~~~l~~~l-~~~Gy~Vvv~D~RG~ 194 (568)
++....+.+..+.|.|.... .....|+||++||.+ |+........+...+ .+.+..|+.+|||=.
T Consensus 66 v~~~~~~~l~vRly~P~~~~-----------~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLA 134 (336)
T KOG1515|consen 66 VTIDPFTNLPVRLYRPTSSS-----------SETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLA 134 (336)
T ss_pred eEecCCCCeEEEEEcCCCCC-----------cccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccC
Confidence 44455666788888875421 126789999999953 221223335666666 445899999999965
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHHHHHHH------CCCCcEEEEEecHHHHHHHHHHHhcC----CCCCceEEEEEcCCC
Q 008371 195 GGISLTSDCFYNGGWTEDLRRVIDYLHCQ------YPEVPLYAVGTSIGANILVKYLGENG----VNTPLVGAAAICSPW 264 (568)
Q Consensus 195 G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~------~~~~~i~lvG~SmGG~ial~ya~~~~----~~~~I~a~V~is~p~ 264 (568)
-..+. ....+|...++.|+.+. .+..+++++|-|.||+||...+.+.. ...++++.|++-|.+
T Consensus 135 PEh~~-------Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~ 207 (336)
T KOG1515|consen 135 PEHPF-------PAAYDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFF 207 (336)
T ss_pred CCCCC-------CccchHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEeccc
Confidence 44332 22347888888887764 23457999999999999988775543 234799999998866
Q ss_pred ChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCccc
Q 008371 265 DLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSAN 344 (568)
Q Consensus 265 d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~ 344 (568)
........-.+.. .................. .+.. .....++-+..+... +...
T Consensus 208 ~~~~~~~~e~~~~-~~~~~~~~~~~~~~~w~~---~lP~-----------~~~~~~~p~~np~~~-----------~~~~ 261 (336)
T KOG1515|consen 208 QGTDRTESEKQQN-LNGSPELARPKIDKWWRL---LLPN-----------GKTDLDHPFINPVGN-----------SLAK 261 (336)
T ss_pred CCCCCCCHHHHHh-hcCCcchhHHHHHHHHHH---hCCC-----------CCCCcCCcccccccc-----------cccc
Confidence 5443211100000 000000000000000000 0000 000011111000000 0011
Q ss_pred ccCCCcc-ceEEEEeCCCCCCCCCC-cchHHHhcCCCEEEEEeCCCCccccccccc-cCcccHHHHHHHHHHHh
Q 008371 345 FVRNVSV-PLLCISTLDDPVCTREA-IPWDECRANEKIILATTRHGGHLAFYEGIT-AKSLWWVRAVNVFLDAL 415 (568)
Q Consensus 345 ~l~~I~v-PvLiI~G~dDpivp~~~-~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~-~~~~w~~~~i~eFL~~~ 415 (568)
......+ |+|++.++.|.+..... +...+.+..-.+.+..+++|+|..++-... ....-+.+.+.+|+.+.
T Consensus 262 d~~~~~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 262 DLSGLGLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CccccCCCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 2223344 59999999999986542 222344555667778899999988765321 12234567777777653
No 118
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.72 E-value=6.2e-08 Score=100.43 Aligned_cols=108 Identities=19% Similarity=0.236 Sum_probs=83.6
Q ss_pred CcEEEEeCCCCCCchhHHH------HHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcH-HHHHHHHHHHHHHCCC
Q 008371 154 NPIVVVIPGLTSDSAAAYI------KHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWT-EDLRRVIDYLHCQYPE 226 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~------~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-~Dl~~vi~~l~~~~~~ 226 (568)
++.++++|-+... .|+ ++++..+.++|..|+++++++=..+.. .+.. ..+. +++.++++.+++..+.
T Consensus 107 ~~PlLiVpP~iNk---~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~--~~~~-edYi~e~l~~aid~v~~itg~ 180 (445)
T COG3243 107 KRPLLIVPPWINK---FYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLA--AKNL-EDYILEGLSEAIDTVKDITGQ 180 (445)
T ss_pred CCceEeeccccCc---eeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhh--hccH-HHHHHHHHHHHHHHHHHHhCc
Confidence 3447778876431 222 378999999999999999998554432 1111 2233 7889999999998888
Q ss_pred CcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhh
Q 008371 227 VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLI 268 (568)
Q Consensus 227 ~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~ 268 (568)
++|.++|+|.||+++..+++..+.. +|+.++.+.+++|+..
T Consensus 181 ~~InliGyCvGGtl~~~ala~~~~k-~I~S~T~lts~~DF~~ 221 (445)
T COG3243 181 KDINLIGYCVGGTLLAAALALMAAK-RIKSLTLLTSPVDFSH 221 (445)
T ss_pred cccceeeEecchHHHHHHHHhhhhc-ccccceeeecchhhcc
Confidence 8999999999999999999988874 5999999999998865
No 119
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.71 E-value=3.3e-07 Score=87.36 Aligned_cols=90 Identities=16% Similarity=0.173 Sum_probs=60.5
Q ss_pred EEEeCCCCCCchhHHHHHHHHHHHhCC--ceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEe
Q 008371 157 VVVIPGLTSDSAAAYIKHLAFKMAGHG--WNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (568)
Q Consensus 157 VVllHGl~G~s~~~y~~~l~~~l~~~G--y~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~ 234 (568)
|+++||+.++..+.-.+.+.+++.+.+ ..+.++|++- ..++..+.++.+.+......+.+||.
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~---------------~p~~a~~~l~~~i~~~~~~~~~liGS 66 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPP---------------FPEEAIAQLEQLIEELKPENVVLIGS 66 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCc---------------CHHHHHHHHHHHHHhCCCCCeEEEEE
Confidence 799999987665554456667777665 3455554431 12444444555555555556999999
Q ss_pred cHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 235 SIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 235 SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
||||..|..++.+++ +++ |+|+|....
T Consensus 67 SlGG~~A~~La~~~~----~~a-vLiNPav~p 93 (187)
T PF05728_consen 67 SLGGFYATYLAERYG----LPA-VLINPAVRP 93 (187)
T ss_pred ChHHHHHHHHHHHhC----CCE-EEEcCCCCH
Confidence 999999998888775 344 888887665
No 120
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.70 E-value=1.1e-06 Score=89.99 Aligned_cols=233 Identities=20% Similarity=0.156 Sum_probs=118.1
Q ss_pred HHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCc--HHHHHHHHHHHHHHC------CCCcEEEEEecHHHHHHH
Q 008371 171 YIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGW--TEDLRRVIDYLHCQY------PEVPLYAVGTSIGANILV 242 (568)
Q Consensus 171 y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~--~~Dl~~vi~~l~~~~------~~~~i~lvG~SmGG~ial 242 (568)
+-..++..+.++||.|++.||.|.|. + |..+. ..++.+.+...++.. ...+++++|||-||.-++
T Consensus 14 ~e~~~l~~~L~~GyaVv~pDY~Glg~-~------y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~ 86 (290)
T PF03583_consen 14 YEAPFLAAWLARGYAVVAPDYEGLGT-P------YLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAAL 86 (290)
T ss_pred hHHHHHHHHHHCCCEEEecCCCCCCC-c------ccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHH
Confidence 33456677788999999999999987 2 21111 123333333333221 246899999999999886
Q ss_pred HHHH---hcCCCCC--ceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChh---hhh--c
Q 008371 243 KYLG---ENGVNTP--LVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWE---GIT--K 312 (568)
Q Consensus 243 ~ya~---~~~~~~~--I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~---~i~--~ 312 (568)
..+. .+..+.. +.++++.++|.|+..............+....+. .+..........+....... .+. .
T Consensus 87 ~AA~l~~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~-gl~~~yP~l~~~~~~~l~~~g~~~~~~~~ 165 (290)
T PF03583_consen 87 WAAELAPSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALL-GLAAAYPELDELLDSYLTPEGRALLDDAR 165 (290)
T ss_pred HHHHHhHHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHH-HHHHhCccHHHHHHHHhhHHHHHHHHHHH
Confidence 5443 3333445 8999999988887654333222111111111110 11100000000000000000 000 0
Q ss_pred cCCHHHH-HHhhhccc-----CCCC---------CHHHHHHhCCc-ccccCCCccceEEEEeCCCCCCCCCCcch---HH
Q 008371 313 SRSIRDF-DNHATRVL-----GKFE---------TVDAYYRHSSS-ANFVRNVSVPLLCISTLDDPVCTREAIPW---DE 373 (568)
Q Consensus 313 ~~~l~~f-d~~~~~~~-----~g~~---------~~~~yy~~~s~-~~~l~~I~vPvLiI~G~dDpivp~~~~~~---~~ 373 (568)
.....+. ........ ..+. .+...++..+. ...-..-++|+++.+|..|.++|...... ..
T Consensus 166 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~ 245 (290)
T PF03583_consen 166 TRCLADIVAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKW 245 (290)
T ss_pred hhhHHHHHHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHH
Confidence 0000000 00000000 0001 11222222221 00112347999999999999999874433 35
Q ss_pred HhcC-CCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhhcC
Q 008371 374 CRAN-EKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTS 418 (568)
Q Consensus 374 ~~~~-~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~~ 418 (568)
|... .++++..++.++|..-.- . ......+|+...++.
T Consensus 246 c~~G~a~V~~~~~~~~~H~~~~~---~----~~~~a~~Wl~~rf~G 284 (290)
T PF03583_consen 246 CAAGGADVEYVRYPGGGHLGAAF---A----SAPDALAWLDDRFAG 284 (290)
T ss_pred HHcCCCCEEEEecCCCChhhhhh---c----CcHHHHHHHHHHHCC
Confidence 6777 789999999999987432 1 125666888877654
No 121
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.68 E-value=3.5e-07 Score=90.11 Aligned_cols=109 Identities=16% Similarity=0.142 Sum_probs=74.8
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHh--------CCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC-
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAG--------HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY- 224 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~--------~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~- 224 (568)
+.+|||+||..|+.. .+ +.++..+.+ ..++++.+|+...... .. .. ......+-+.+.++++.+.+
T Consensus 4 g~pVlFIhG~~Gs~~-q~-rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~-~~-g~-~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 4 GIPVLFIHGNAGSYK-QV-RSLASELQRKALLNDNSSHFDFFTVDFNEELSA-FH-GR-TLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCEEEEECcCCCCHh-HH-HHHHHHHhhhhhhccCccceeEEEeccCccccc-cc-cc-cHHHHHHHHHHHHHHHHHhhh
Confidence 456999999977544 33 566655522 2588999998764211 11 11 11233466777888887777
Q ss_pred ----CCCcEEEEEecHHHHHHHHHHHhcCCC-CCceEEEEEcCCCChh
Q 008371 225 ----PEVPLYAVGTSIGANILVKYLGENGVN-TPLVGAAAICSPWDLL 267 (568)
Q Consensus 225 ----~~~~i~lvG~SmGG~ial~ya~~~~~~-~~I~a~V~is~p~d~~ 267 (568)
+..++++|||||||.++-.++...... ..|+.+|.+++|....
T Consensus 79 ~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 79 SNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred hccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 678999999999999998887665422 3699999999988654
No 122
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.67 E-value=1e-07 Score=95.21 Aligned_cols=112 Identities=21% Similarity=0.372 Sum_probs=71.4
Q ss_pred cEEEEeCCCCCCchhHHHHHHHHHHH-hCCc--eE--EEEcCCC----CCCCCCC--CCC---CCC--C-----CcHHHH
Q 008371 155 PIVVVIPGLTSDSAAAYIKHLAFKMA-GHGW--NV--VVSNHRG----LGGISLT--SDC---FYN--G-----GWTEDL 213 (568)
Q Consensus 155 PvVVllHGl~G~s~~~y~~~l~~~l~-~~Gy--~V--vv~D~RG----~G~S~~~--~~~---~~~--~-----~~~~Dl 213 (568)
-+.||+||+.|+.. .+ ..++..+. ++|. .+ +-++--| .|.-+.. .|- .|. . ..+.-+
T Consensus 12 tPTifihG~~gt~~-s~-~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl 89 (255)
T PF06028_consen 12 TPTIFIHGYGGTAN-SF-NHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWL 89 (255)
T ss_dssp EEEEEE--TTGGCC-CC-HHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHH
T ss_pred CcEEEECCCCCChh-HH-HHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHH
Confidence 34699999977543 44 78999997 6664 33 3333334 1221111 110 011 1 134678
Q ss_pred HHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCC---CceEEEEEcCCCChhh
Q 008371 214 RRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNT---PLVGAAAICSPWDLLI 268 (568)
Q Consensus 214 ~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~---~I~a~V~is~p~d~~~ 268 (568)
..++.+|+++|.-.++.+|||||||+.++.|+..++.+. ++..+|+|++|++...
T Consensus 90 ~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~ 147 (255)
T PF06028_consen 90 KKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGIL 147 (255)
T ss_dssp HHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTT
T ss_pred HHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccc
Confidence 999999999999999999999999999999999986543 5899999999998753
No 123
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.67 E-value=4.8e-08 Score=103.42 Aligned_cols=107 Identities=19% Similarity=0.259 Sum_probs=63.3
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCC-C-C-CCC-----C-----C-------CCC---C
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGI-S-L-TSD-----C-----F-------YNG---G 208 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S-~-~-~~~-----~-----~-------~~~---~ 208 (568)
++-|+|||-||++| +...| ..++..|+.+||-|+++|||..-.. . . ... . . +.. .
T Consensus 98 ~~~PvvIFSHGlgg-~R~~y-S~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (379)
T PF03403_consen 98 GKFPVVIFSHGLGG-SRTSY-SAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPE 175 (379)
T ss_dssp S-EEEEEEE--TT---TTTT-HHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GG
T ss_pred CCCCEEEEeCCCCc-chhhH-HHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccch
Confidence 56899999999976 45566 6899999999999999999964211 0 0 000 0 0 000 0
Q ss_pred ------------cHHHHHHHHHHHHHHC----------------------CCCcEEEEEecHHHHHHHHHHHhcCCCCCc
Q 008371 209 ------------WTEDLRRVIDYLHCQY----------------------PEVPLYAVGTSIGANILVKYLGENGVNTPL 254 (568)
Q Consensus 209 ------------~~~Dl~~vi~~l~~~~----------------------~~~~i~lvG~SmGG~ial~ya~~~~~~~~I 254 (568)
.++|+..+++.+.+.. .-.++.++|||+||..++..+.+.. ++
T Consensus 176 ~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~---r~ 252 (379)
T PF03403_consen 176 EEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDT---RF 252 (379)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-T---T-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhcc---Cc
Confidence 1257788888776411 1236899999999999998888774 59
Q ss_pred eEEEEEcCC
Q 008371 255 VGAAAICSP 263 (568)
Q Consensus 255 ~a~V~is~p 263 (568)
+++|++++.
T Consensus 253 ~~~I~LD~W 261 (379)
T PF03403_consen 253 KAGILLDPW 261 (379)
T ss_dssp -EEEEES--
T ss_pred ceEEEeCCc
Confidence 999998653
No 124
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.65 E-value=1e-06 Score=88.27 Aligned_cols=248 Identities=12% Similarity=0.175 Sum_probs=119.7
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHH-----HHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCC
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHL-----AFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPE 226 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l-----~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~ 226 (568)
.++|++|-.|-++-+..+.| ..+ +..+. +.+.++=+|.+|+..-..+.+..|.+-..+++.+.+..+.+.+.-
T Consensus 21 ~~kp~ilT~HDvGlNh~scF-~~ff~~~~m~~i~-~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~l 98 (283)
T PF03096_consen 21 GNKPAILTYHDVGLNHKSCF-QGFFNFEDMQEIL-QNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGL 98 (283)
T ss_dssp TTS-EEEEE--TT--HHHHC-HHHHCSHHHHHHH-TTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT-
T ss_pred CCCceEEEeccccccchHHH-HHHhcchhHHHHh-hceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCc
Confidence 36999999998843333323 222 23333 569999999999876544444455555556666666666666666
Q ss_pred CcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHH-HHHHHHHHHHhHhhHHhhhhhhhccC
Q 008371 227 VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQ-KCYDRVIAIGLRGFAQLHQSTVARLA 305 (568)
Q Consensus 227 ~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~~~~~~~~~~~ 305 (568)
+.++.+|-=.||+|..+||..+|+ ++.|+|+|++.........+...++.. .++..-+......++..|. |.+
T Consensus 99 k~vIg~GvGAGAnIL~rfAl~~p~--~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gmt~~~~d~Ll~h~--Fg~-- 172 (283)
T PF03096_consen 99 KSVIGFGVGAGANILARFALKHPE--RVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGMTSSVKDYLLWHY--FGK-- 172 (283)
T ss_dssp --EEEEEETHHHHHHHHHHHHSGG--GEEEEEEES---S---HHHHHHHHHH-------CTTS-HHHHHHHHH--S-H--
T ss_pred cEEEEEeeccchhhhhhccccCcc--ceeEEEEEecCCCCccHHHHHHHHHhcccccccccccchHHhhhhcc--ccc--
Confidence 689999999999999999999999 899999998866554333333222211 1111111112222222111 000
Q ss_pred Chhhhhc-cCCHHHHHHhhhcccCCCCCHH----HHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCE
Q 008371 306 DWEGITK-SRSIRDFDNHATRVLGKFETVD----AYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKI 380 (568)
Q Consensus 306 d~~~i~~-~~~l~~fd~~~~~~~~g~~~~~----~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~ 380 (568)
+.... ..-+..+.+.+.... .-.++. .|-++.+.....+...||+|++.|+..|....- ..........+.
T Consensus 173 --~~~~~n~Dlv~~yr~~l~~~~-Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~~v-v~~ns~Ldp~~t 248 (283)
T PF03096_consen 173 --EEEENNSDLVQTYRQHLDERI-NPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVDDV-VEMNSKLDPTKT 248 (283)
T ss_dssp --HHHHCT-HHHHHHHHHHHT-T-THHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHHHH-HHHHHHS-CCCE
T ss_pred --ccccccHHHHHHHHHHHhcCC-CHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchhhH-HHHHhhcCcccc
Confidence 00000 001112222221110 001222 232233333445667899999999998876421 111122234578
Q ss_pred EEEEeCCCCccccccccccCcccHHHHHHHHHHHh
Q 008371 381 ILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDAL 415 (568)
Q Consensus 381 ~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~ 415 (568)
.++.++++|=+...| .|.-+.+.+.=|+.-+
T Consensus 249 tllkv~dcGglV~eE----qP~klaea~~lFlQG~ 279 (283)
T PF03096_consen 249 TLLKVADCGGLVLEE----QPGKLAEAFKLFLQGM 279 (283)
T ss_dssp EEEEETT-TT-HHHH-----HHHHHHHHHHHHHHT
T ss_pred eEEEecccCCccccc----CcHHHHHHHHHHHccC
Confidence 999999998877776 3334778888887754
No 125
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.62 E-value=2.2e-07 Score=87.39 Aligned_cols=102 Identities=18% Similarity=0.128 Sum_probs=80.0
Q ss_pred EEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEec
Q 008371 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTS 235 (568)
Q Consensus 156 vVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~S 235 (568)
.+||+-|=+|-. ..-+.+++.|+++|+.|+.+|-+-+=-+..+ | .....|+.+++++..++....+++++|+|
T Consensus 4 ~~v~~SGDgGw~--~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rt-P----~~~a~Dl~~~i~~y~~~w~~~~vvLiGYS 76 (192)
T PF06057_consen 4 LAVFFSGDGGWR--DLDKQIAEALAKQGVPVVGVDSLRYFWSERT-P----EQTAADLARIIRHYRARWGRKRVVLIGYS 76 (192)
T ss_pred EEEEEeCCCCch--hhhHHHHHHHHHCCCeEEEechHHHHhhhCC-H----HHHHHHHHHHHHHHHHHhCCceEEEEeec
Confidence 578888875533 4457899999999999999998765444433 2 23468999999999999888999999999
Q ss_pred HHHHHHHHHHHhcCCC--CCceEEEEEcCCC
Q 008371 236 IGANILVKYLGENGVN--TPLVGAAAICSPW 264 (568)
Q Consensus 236 mGG~ial~ya~~~~~~--~~I~a~V~is~p~ 264 (568)
+||-++-....+.|.. .+|+.++++++.-
T Consensus 77 FGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 77 FGADVLPFIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred CCchhHHHHHhhCCHHHHhheeEEEEeccCC
Confidence 9999988777776642 3699999987643
No 126
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.62 E-value=5.7e-07 Score=87.72 Aligned_cols=104 Identities=18% Similarity=0.187 Sum_probs=79.7
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC----C-
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY----P- 225 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~----~- 225 (568)
.+.-|+|+|+||+.- ..+.| ..+..+++.+||-|+++++-..-. + .....+++..++++|+.+.. |
T Consensus 43 ~G~yPVilF~HG~~l-~ns~Y-s~lL~HIASHGfIVVAPQl~~~~~-----p--~~~~Ei~~aa~V~~WL~~gL~~~Lp~ 113 (307)
T PF07224_consen 43 AGTYPVILFLHGFNL-YNSFY-SQLLAHIASHGFIVVAPQLYTLFP-----P--DGQDEIKSAASVINWLPEGLQHVLPE 113 (307)
T ss_pred CCCccEEEEeechhh-hhHHH-HHHHHHHhhcCeEEEechhhcccC-----C--CchHHHHHHHHHHHHHHhhhhhhCCC
Confidence 456899999999963 44444 789999999999999999865321 1 11345688999999997653 1
Q ss_pred -----CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCC
Q 008371 226 -----EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (568)
Q Consensus 226 -----~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p 263 (568)
..++.++|||.||-.|..+|..+..+.++.++|-++|.
T Consensus 114 ~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 114 NVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPV 156 (307)
T ss_pred CcccccceEEEeecCCccHHHHHHHhcccccCchhheeccccc
Confidence 35799999999999999998877655578888887654
No 127
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.61 E-value=7.4e-07 Score=82.19 Aligned_cols=175 Identities=15% Similarity=0.205 Sum_probs=100.8
Q ss_pred cEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEe
Q 008371 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (568)
Q Consensus 155 PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~ 234 (568)
+.+|+|||+.|++...|....-..+.. +-.+++. +...+ ..+.|++-+.+.++ .. ..++++|+|
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~~----a~rveq~-----~w~~P--~~~dWi~~l~~~v~---a~--~~~~vlVAH 66 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALPN----ARRVEQD-----DWEAP--VLDDWIARLEKEVN---AA--EGPVVLVAH 66 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCcc----chhcccC-----CCCCC--CHHHHHHHHHHHHh---cc--CCCeEEEEe
Confidence 458999999988777775444333322 2222221 11111 11233333333333 32 347999999
Q ss_pred cHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccC
Q 008371 235 SIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSR 314 (568)
Q Consensus 235 SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~ 314 (568)
|+|...+++++.+... +|.|++++++|---... . .
T Consensus 67 SLGc~~v~h~~~~~~~--~V~GalLVAppd~~~~~--~--~--------------------------------------- 101 (181)
T COG3545 67 SLGCATVAHWAEHIQR--QVAGALLVAPPDVSRPE--I--R--------------------------------------- 101 (181)
T ss_pred cccHHHHHHHHHhhhh--ccceEEEecCCCccccc--c--c---------------------------------------
Confidence 9999999999998877 89999999776421100 0 0
Q ss_pred CHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccc
Q 008371 315 SIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFY 394 (568)
Q Consensus 315 ~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~ 394 (568)
+... ..|. ........-|.+++.+.+||+++.+.... .... =...++.+.++||+.--
T Consensus 102 -----~~~~----~tf~-----------~~p~~~lpfps~vvaSrnDp~~~~~~a~~-~a~~-wgs~lv~~g~~GHiN~~ 159 (181)
T COG3545 102 -----PKHL----MTFD-----------PIPREPLPFPSVVVASRNDPYVSYEHAED-LANA-WGSALVDVGEGGHINAE 159 (181)
T ss_pred -----hhhc----cccC-----------CCccccCCCceeEEEecCCCCCCHHHHHH-HHHh-ccHhheecccccccchh
Confidence 0000 0000 01123556799999999999999876544 2222 24567888899998765
Q ss_pred cccccCcccHHHHHHHHHH
Q 008371 395 EGITAKSLWWVRAVNVFLD 413 (568)
Q Consensus 395 eg~~~~~~w~~~~i~eFL~ 413 (568)
+|..+.+ .....+.+|+.
T Consensus 160 sG~g~wp-eg~~~l~~~~s 177 (181)
T COG3545 160 SGFGPWP-EGYALLAQLLS 177 (181)
T ss_pred hcCCCcH-HHHHHHHHHhh
Confidence 5533322 22344455544
No 128
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.54 E-value=2.7e-06 Score=84.20 Aligned_cols=125 Identities=15% Similarity=0.076 Sum_probs=74.4
Q ss_pred CCCCEEEEEEeccCccccCCccccccccCCCCC-cEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCC---CC
Q 008371 122 PDGGTIALDWLTYSDVIQGSTHVNRGILNCEKN-PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG---GI 197 (568)
Q Consensus 122 ~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~-PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G---~S 197 (568)
+-|.++.+..|.|.+. ..+.+- |.|||+||-+..+...+ .. +. .|.-.++.+.+-.+ .+
T Consensus 169 ~tgneLkYrly~Pkdy-----------~pdkky~PLvlfLHgagq~g~dn~-~~----l~-sg~gaiawa~pedqcfVlA 231 (387)
T COG4099 169 STGNELKYRLYTPKDY-----------APDKKYYPLVLFLHGAGQGGSDND-KV----LS-SGIGAIAWAGPEDQCFVLA 231 (387)
T ss_pred ccCceeeEEEeccccc-----------CCCCccccEEEEEecCCCCCchhh-hh----hh-cCccceeeecccCceEEEc
Confidence 3478889999988653 223444 99999999765444444 21 11 12233333333222 01
Q ss_pred CCCCC----CC-CCCCcHHHHHHHHH-HHHHHCC--CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCC
Q 008371 198 SLTSD----CF-YNGGWTEDLRRVID-YLHCQYP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (568)
Q Consensus 198 ~~~~~----~~-~~~~~~~Dl~~vi~-~l~~~~~--~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d 265 (568)
+--.+ .. -..........+++ -+..+|. ..+|+++|.|+||+.++.++.++|+ .+.+++.||+.++
T Consensus 232 PQy~~if~d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd--fFAaa~~iaG~~d 305 (387)
T COG4099 232 PQYNPIFADSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD--FFAAAVPIAGGGD 305 (387)
T ss_pred ccccccccccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch--hhheeeeecCCCc
Confidence 10000 00 00111122233333 4455553 5689999999999999999999999 8999999998776
No 129
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.53 E-value=7.2e-06 Score=83.31 Aligned_cols=119 Identities=19% Similarity=0.190 Sum_probs=81.4
Q ss_pred CceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHH-----HHHHHHHHhCCceEE
Q 008371 113 SYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYI-----KHLAFKMAGHGWNVV 187 (568)
Q Consensus 113 ~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~-----~~l~~~l~~~Gy~Vv 187 (568)
+.+|..++. ||..|..--...++ ......|+++-|.++.-+..++ ..+.+.+...|-+|+
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~--------------a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl 175 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPE--------------AKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVL 175 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCC--------------CCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEE
Confidence 557777776 77666321121111 2345689999997554333222 234444455688999
Q ss_pred EEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC---CCCcEEEEEecHHHHHHHHHHHhcC
Q 008371 188 VSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY---PEVPLYAVGTSIGANILVKYLGENG 249 (568)
Q Consensus 188 v~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~---~~~~i~lvG~SmGG~ial~ya~~~~ 249 (568)
++|+||.|.|.+... ....+.|..++++|++++. ....|++.|||+||.++...+..+.
T Consensus 176 ~fNYpGVg~S~G~~s---~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 176 VFNYPGVGSSTGPPS---RKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred EECCCccccCCCCCC---HHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 999999999987543 2567789999999998743 2357999999999999987766653
No 130
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.51 E-value=4.2e-07 Score=85.32 Aligned_cols=202 Identities=13% Similarity=0.083 Sum_probs=122.4
Q ss_pred EEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCC---CCchhHHHHHHHHHHHhCCceEEEEcCCCC
Q 008371 118 LFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT---SDSAAAYIKHLAFKMAGHGWNVVVSNHRGL 194 (568)
Q Consensus 118 ~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~---G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~ 194 (568)
.+..-.|+.-..|.+.+ ....|+.||+||.- |+... . -..+..+.++||+|+++++
T Consensus 47 ~l~Yg~~g~q~VDIwg~----------------~~~~klfIfIHGGYW~~g~rk~-c-lsiv~~a~~~gY~vasvgY--- 105 (270)
T KOG4627|consen 47 HLRYGEGGRQLVDIWGS----------------TNQAKLFIFIHGGYWQEGDRKM-C-LSIVGPAVRRGYRVASVGY--- 105 (270)
T ss_pred ccccCCCCceEEEEecC----------------CCCccEEEEEecchhhcCchhc-c-cchhhhhhhcCeEEEEecc---
Confidence 34444455556676654 24568999999921 22221 2 3577888899999999865
Q ss_pred CCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCc-EEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHH
Q 008371 195 GGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVP-LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFI 273 (568)
Q Consensus 195 G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~-i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~ 273 (568)
+.++. .+ .-.....|+..-++++.+.+++.+ +.+-|||.|+.++.+...+..+ ++|.|+++.|+-+++.+.....
T Consensus 106 ~l~~q--~h-tL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~-prI~gl~l~~GvY~l~EL~~te 181 (270)
T KOG4627|consen 106 NLCPQ--VH-TLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRS-PRIWGLILLCGVYDLRELSNTE 181 (270)
T ss_pred CcCcc--cc-cHHHHHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcC-chHHHHHHHhhHhhHHHHhCCc
Confidence 33321 10 112234788888999999988765 5667999999999988877543 3788888887766653211000
Q ss_pred hHHHHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCc-ccccCCCccc
Q 008371 274 NRRLVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSS-ANFVRNVSVP 352 (568)
Q Consensus 274 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~-~~~l~~I~vP 352 (568)
. . . | .|..+ +--+.+|| ...+..+++|
T Consensus 182 ~------------------------------g--~-----------d-------lgLt~--~~ae~~Scdl~~~~~v~~~ 209 (270)
T KOG4627|consen 182 S------------------------------G--N-----------D-------LGLTE--RNAESVSCDLWEYTDVTVW 209 (270)
T ss_pred c------------------------------c--c-----------c-------cCccc--chhhhcCccHHHhcCceee
Confidence 0 0 0 0 00000 00011122 2346789999
Q ss_pred eEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCcccccccc
Q 008371 353 LLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGI 397 (568)
Q Consensus 353 vLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~ 397 (568)
+|++.|+.|.---.+.- +..........+..+++-+|...++..
T Consensus 210 ilVv~~~~espklieQn-rdf~~q~~~a~~~~f~n~~hy~I~~~~ 253 (270)
T KOG4627|consen 210 ILVVAAEHESPKLIEQN-RDFADQLRKASFTLFKNYDHYDIIEET 253 (270)
T ss_pred eeEeeecccCcHHHHhh-hhHHHHhhhcceeecCCcchhhHHHHh
Confidence 99999999842211211 123344455888999999999988853
No 131
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.48 E-value=7.7e-07 Score=95.67 Aligned_cols=96 Identities=11% Similarity=0.104 Sum_probs=77.9
Q ss_pred hHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhc
Q 008371 169 AAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGEN 248 (568)
Q Consensus 169 ~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~ 248 (568)
..|+..+++.|.+.||.+ ..|++|+|.+-..+.. .....+++.+.++.+.+.++..+++++||||||.++..++..+
T Consensus 107 ~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~--~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 107 VYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNR--LPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred HHHHHHHHHHHHHcCCcc-CCCcccCCCCcccccc--HHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHC
Confidence 356689999999999866 7899999987543211 1234689999999999888888999999999999999999887
Q ss_pred CCC--CCceEEEEEcCCCChh
Q 008371 249 GVN--TPLVGAAAICSPWDLL 267 (568)
Q Consensus 249 ~~~--~~I~a~V~is~p~d~~ 267 (568)
++. ..|+.+|++++|+...
T Consensus 184 p~~~~k~I~~~I~la~P~~Gs 204 (440)
T PLN02733 184 SDVFEKYVNSWIAIAAPFQGA 204 (440)
T ss_pred CHhHHhHhccEEEECCCCCCC
Confidence 752 2589999999998765
No 132
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.47 E-value=2e-06 Score=84.00 Aligned_cols=109 Identities=18% Similarity=0.224 Sum_probs=73.4
Q ss_pred CCCcEEEEeCCCCCCchhHHHH--HHHHHHHhCCceEEEEcCCCCCCCC--CC---CCCCCCCCcHHHHHHHHHHHHHHC
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIK--HLAFKMAGHGWNVVVSNHRGLGGIS--LT---SDCFYNGGWTEDLRRVIDYLHCQY 224 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~--~l~~~l~~~Gy~Vvv~D~RG~G~S~--~~---~~~~~~~~~~~Dl~~vi~~l~~~~ 224 (568)
.+.|+||++||.+++ ...+.. .+.+...++||-|+.++........ .. .......+....+.++++++..++
T Consensus 14 ~~~PLVv~LHG~~~~-a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~ 92 (220)
T PF10503_consen 14 GPVPLVVVLHGCGQS-AEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARY 92 (220)
T ss_pred CCCCEEEEeCCCCCC-HHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhc
Confidence 357999999998654 444433 2334445578999988853211110 00 001111234567889999999888
Q ss_pred C--CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCC
Q 008371 225 P--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (568)
Q Consensus 225 ~--~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p 263 (568)
+ ..+|++.|+|.||+++..++..+|+ .+.++..++..
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd--~faa~a~~sG~ 131 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPD--LFAAVAVVSGV 131 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCc--cceEEEeeccc
Confidence 5 4589999999999999999999999 77777666553
No 133
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.39 E-value=3.6e-05 Score=83.84 Aligned_cols=135 Identities=15% Similarity=0.112 Sum_probs=85.2
Q ss_pred eEEEEEcCC---CCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHH------------HH
Q 008371 115 KRHLFQTPD---GGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAF------------KM 179 (568)
Q Consensus 115 ~r~~~~~~D---Gg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~------------~l 179 (568)
..-++...+ +..+.+..++... ...+.|+|++++|.+|+|... .+.. .+
T Consensus 48 ~sGy~~v~~~~~~~~lFyw~~~s~~-------------~~~~~Pl~lwlnGGPG~ss~~---G~f~E~GP~~i~~~~~~~ 111 (462)
T PTZ00472 48 WSGYFDIPGNQTDKHYFYWAFGPRN-------------GNPEAPVLLWMTGGPGCSSMF---ALLAENGPCLMNETTGDI 111 (462)
T ss_pred eeEEEEeCCCCCCceEEEEEEEcCC-------------CCCCCCEEEEECCCCcHHHHH---hhhccCCCeEEeCCCCce
Confidence 345566653 5667775554322 145679999999999877531 1111 01
Q ss_pred H------hCCceEEEEcC-CCCCCCCCCCCCCC--CCCcHHHHHHHHHHHHHHCCC---CcEEEEEecHHHHHHHHHHHh
Q 008371 180 A------GHGWNVVVSNH-RGLGGISLTSDCFY--NGGWTEDLRRVIDYLHCQYPE---VPLYAVGTSIGANILVKYLGE 247 (568)
Q Consensus 180 ~------~~Gy~Vvv~D~-RG~G~S~~~~~~~~--~~~~~~Dl~~vi~~l~~~~~~---~~i~lvG~SmGG~ial~ya~~ 247 (568)
. .+-.+++.+|. +|+|.|........ .....+|+.++++...+++|. .+++++|+||||..+..++.+
T Consensus 112 ~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~ 191 (462)
T PTZ00472 112 YNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYR 191 (462)
T ss_pred eECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHH
Confidence 0 12257889996 58888865332211 123457888888887777764 799999999999998777655
Q ss_pred cC--------CCCCceEEEEEcCCCC
Q 008371 248 NG--------VNTPLVGAAAICSPWD 265 (568)
Q Consensus 248 ~~--------~~~~I~a~V~is~p~d 265 (568)
-- ....++++++.++..+
T Consensus 192 i~~~n~~~~~~~inLkGi~IGNg~~d 217 (462)
T PTZ00472 192 INMGNKKGDGLYINLAGLAVGNGLTD 217 (462)
T ss_pred HHhhccccCCceeeeEEEEEeccccC
Confidence 21 1135788777665443
No 134
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.35 E-value=1.9e-07 Score=91.06 Aligned_cols=90 Identities=20% Similarity=0.250 Sum_probs=57.6
Q ss_pred EEEeCCCCCCchhHHHHHHHHHHHhCCce---EEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008371 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWN---VVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (568)
Q Consensus 157 VVllHGl~G~s~~~y~~~l~~~l~~~Gy~---Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG 233 (568)
|||+||..++....| ..+++.|.++||. ++++++-...................+++++|+.++...+. ++-+||
T Consensus 4 VVlVHG~~~~~~~~w-~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVg 81 (219)
T PF01674_consen 4 VVLVHGTGGNAYSNW-STLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVG 81 (219)
T ss_dssp EEEE--TTTTTCGGC-CHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEE
T ss_pred EEEECCCCcchhhCH-HHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEE
Confidence 899999977555566 6799999999999 79999854433221000000112336889999999887777 999999
Q ss_pred ecHHHHHHHHHHHhc
Q 008371 234 TSIGANILVKYLGEN 248 (568)
Q Consensus 234 ~SmGG~ial~ya~~~ 248 (568)
|||||.++-+|+...
T Consensus 82 HS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 82 HSMGGTIARYYIKGG 96 (219)
T ss_dssp ETCHHHHHHHHHHHC
T ss_pred cCCcCHHHHHHHHHc
Confidence 999999998887643
No 135
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.32 E-value=5.8e-06 Score=83.17 Aligned_cols=134 Identities=16% Similarity=0.078 Sum_probs=92.4
Q ss_pred CCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcC
Q 008371 112 ISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (568)
Q Consensus 112 ~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~ 191 (568)
-+.+|-.+.+.||.+|..-+...... .....+..||.+-|..|-.+ -..+..-++.||.|+.+|+
T Consensus 212 ~NG~R~kiks~dgneiDtmF~d~r~n-----------~~~ngq~LvIC~EGNAGFYE----vG~m~tP~~lgYsvLGwNh 276 (517)
T KOG1553|consen 212 KNGQRLKIKSSDGNEIDTMFLDGRPN-----------QSGNGQDLVICFEGNAGFYE----VGVMNTPAQLGYSVLGWNH 276 (517)
T ss_pred CCCeEEEEeecCCcchhheeecCCCC-----------CCCCCceEEEEecCCccceE----eeeecChHHhCceeeccCC
Confidence 36678888899998875434332110 11334567888888876332 2344444567999999999
Q ss_pred CCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH--CCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 192 RGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ--YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 192 RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~--~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
+|+++|.+.+- . .....-+.+++++..+. ++.+.|++.|+|.||.-++..|..+|+ |+++|+-+.--|+
T Consensus 277 PGFagSTG~P~-p--~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd---VkavvLDAtFDDl 347 (517)
T KOG1553|consen 277 PGFAGSTGLPY-P--VNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD---VKAVVLDATFDDL 347 (517)
T ss_pred CCccccCCCCC-c--ccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC---ceEEEeecchhhh
Confidence 99999986532 1 22234455666666554 467789999999999999999999998 9999976544333
No 136
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.31 E-value=2.4e-05 Score=79.82 Aligned_cols=117 Identities=15% Similarity=0.189 Sum_probs=87.8
Q ss_pred CCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhC---C------ceEEEEcCCC
Q 008371 123 DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGH---G------WNVVVSNHRG 193 (568)
Q Consensus 123 DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~---G------y~Vvv~D~RG 193 (568)
.|-.|.+-...+++.+ ......| ++++|||+|+-.+-| .++..|.+. | |.|+++.++|
T Consensus 132 eGL~iHFlhvk~p~~k----------~~k~v~P-lLl~HGwPGsv~EFy--kfIPlLT~p~~hg~~~d~~FEVI~PSlPG 198 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKK----------KKKKVKP-LLLLHGWPGSVREFY--KFIPLLTDPKRHGNESDYAFEVIAPSLPG 198 (469)
T ss_pred cceeEEEEEecCCccc----------cCCcccc-eEEecCCCchHHHHH--hhhhhhcCccccCCccceeEEEeccCCCC
Confidence 5777766666555421 1123344 789999999766555 577777654 3 8999999999
Q ss_pred CCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEE
Q 008371 194 LGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGA 257 (568)
Q Consensus 194 ~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~ 257 (568)
+|-|+.++...++. ..++.++..+.-+.+..+.++=|-.+|+.|+.+++..+|+ +|.|.
T Consensus 199 ygwSd~~sk~GFn~---~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPe--nV~Gl 257 (469)
T KOG2565|consen 199 YGWSDAPSKTGFNA---AATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPE--NVLGL 257 (469)
T ss_pred cccCcCCccCCccH---HHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcch--hhhHh
Confidence 99999887665543 5667778888888888899999999999999999999998 55543
No 137
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.28 E-value=4.7e-07 Score=94.06 Aligned_cols=109 Identities=17% Similarity=0.206 Sum_probs=68.2
Q ss_pred CCCCcEEEEeCCCCCCc-hhHHHHHHHHHHHhC---CceEEEEcCCCCCCCCCCCCCCCCC--CcH----HHHHHHHHHH
Q 008371 151 CEKNPIVVVIPGLTSDS-AAAYIKHLAFKMAGH---GWNVVVSNHRGLGGISLTSDCFYNG--GWT----EDLRRVIDYL 220 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s-~~~y~~~l~~~l~~~---Gy~Vvv~D~RG~G~S~~~~~~~~~~--~~~----~Dl~~vi~~l 220 (568)
+..+|++|++|||.++. ...|+..+...+.++ +++|+++|+...... .|.. ..+ ..+..++..|
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~------~Y~~a~~n~~~vg~~la~~l~~L 141 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASN------NYPQAVANTRLVGRQLAKFLSFL 141 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccc------cccchhhhHHHHHHHHHHHHHHH
Confidence 56789999999999877 567778888876654 799999999754321 1211 112 3555666666
Q ss_pred HHH--CCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCC
Q 008371 221 HCQ--YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (568)
Q Consensus 221 ~~~--~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d 265 (568)
... .+.+++++||||+||.++-..........+|..+..++|...
T Consensus 142 ~~~~g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 142 INNFGVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp HHHH---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred HhhcCCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 533 356789999999999999866555444336889999887543
No 138
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.26 E-value=3.5e-07 Score=89.35 Aligned_cols=53 Identities=19% Similarity=0.203 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHCC--CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 211 EDLRRVIDYLHCQYP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~--~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
+-+.++++||+++-. ..+|.++|.|.||-+++.++..++. |+++|+++++.-.
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~---i~avVa~~ps~~~ 58 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ---ISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS---EEEEEEES--SB-
T ss_pred HHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC---ccEEEEeCCceeE
Confidence 457889999987632 3589999999999999999999986 9999999876544
No 139
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.24 E-value=1.2e-05 Score=80.20 Aligned_cols=107 Identities=19% Similarity=0.222 Sum_probs=71.5
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCC------CCCCCCCC----------CCc-----
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGIS------LTSDCFYN----------GGW----- 209 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~------~~~~~~~~----------~~~----- 209 (568)
+++-|+|||-||++| +..-| ..++-.|+.+||-|.++.+|-+..+- ......+. .+.
T Consensus 115 ~~k~PvvvFSHGLgg-sRt~Y-Sa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~i 192 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGG-SRTLY-SAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHI 192 (399)
T ss_pred CCCccEEEEeccccc-chhhH-HHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEe
Confidence 567899999999965 56566 78999999999999999999865331 10000000 000
Q ss_pred --------HHHHHHHHHHHHHH-----------------------CCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEE
Q 008371 210 --------TEDLRRVIDYLHCQ-----------------------YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAA 258 (568)
Q Consensus 210 --------~~Dl~~vi~~l~~~-----------------------~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V 258 (568)
.++...+++-|.+. ....++.++|||+||..++...+.+-+ ++++|
T Consensus 193 rNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~---FrcaI 269 (399)
T KOG3847|consen 193 RNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD---FRCAI 269 (399)
T ss_pred eCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc---eeeee
Confidence 13444444444321 112458899999999999877776554 99999
Q ss_pred EEcC
Q 008371 259 AICS 262 (568)
Q Consensus 259 ~is~ 262 (568)
+++.
T Consensus 270 ~lD~ 273 (399)
T KOG3847|consen 270 ALDA 273 (399)
T ss_pred eeee
Confidence 8754
No 140
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.23 E-value=5.3e-05 Score=75.31 Aligned_cols=218 Identities=15% Similarity=0.135 Sum_probs=119.6
Q ss_pred EEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCC--CcEEEEEe
Q 008371 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPE--VPLYAVGT 234 (568)
Q Consensus 157 VVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~--~~i~lvG~ 234 (568)
+|++=||.|... ..+...++...+.|++++++-.+-....... .+...-+..+++.+.+.... .++++-.+
T Consensus 2 lvvl~gW~gA~~-~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~------~~~~~~~~~l~~~l~~~~~~~~~~il~H~F 74 (240)
T PF05705_consen 2 LVVLLGWMGAKP-KHLAKYSDLYQDPGFDILLVTSPPADFFWPS------KRLAPAADKLLELLSDSQSASPPPILFHSF 74 (240)
T ss_pred EEEEEeCCCCCH-HHHHHHHHHHHhcCCeEEEEeCCHHHHeeec------cchHHHHHHHHHHhhhhccCCCCCEEEEEE
Confidence 456667877544 4556666777779999999865542211110 12223444455555544332 28999999
Q ss_pred cHHHHHHHHHHHh-----c--CCC-CCceEEEEEcCCCChhh--hhHHHhHHHHHH----H--HHHHHHHHhHhhHHhhh
Q 008371 235 SIGANILVKYLGE-----N--GVN-TPLVGAAAICSPWDLLI--CDRFINRRLVQK----C--YDRVIAIGLRGFAQLHQ 298 (568)
Q Consensus 235 SmGG~ial~ya~~-----~--~~~-~~I~a~V~is~p~d~~~--~~~~~~~~~~~~----~--~~~~l~~~l~~~~~~~~ 298 (568)
|.||...+..+.+ . +.. .+++|.|.-|+|..... ....+....... + ........+...
T Consensus 75 SnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 149 (240)
T PF05705_consen 75 SNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAALPKSSPRWFVPLWPLLQFLLRLS----- 149 (240)
T ss_pred ECchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHHcCccchhhHHHHHHHHHHHHHHH-----
Confidence 9988887765442 1 111 13899998888754432 111111100000 0 000000000000
Q ss_pred hhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchH---HHh
Q 008371 299 STVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWD---ECR 375 (568)
Q Consensus 299 ~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~---~~~ 375 (568)
.......+......++............++|-|+|++++|++++.+.++.. ..+
T Consensus 150 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~ 206 (240)
T PF05705_consen 150 -----------------------IISYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARR 206 (240)
T ss_pred -----------------------HHHHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHH
Confidence 000011222333333333322223345679999999999999999876642 233
Q ss_pred cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHH
Q 008371 376 ANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFL 412 (568)
Q Consensus 376 ~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL 412 (568)
..-.+....+++++|++++. .++..+.+.+.+|+
T Consensus 207 ~G~~V~~~~f~~S~HV~H~r---~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 207 KGWDVRAEKFEDSPHVAHLR---KHPDRYWRAVDEFW 240 (240)
T ss_pred cCCeEEEecCCCCchhhhcc---cCHHHHHHHHHhhC
Confidence 45568899999999999987 35555668888774
No 141
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.22 E-value=4.1e-05 Score=81.60 Aligned_cols=103 Identities=14% Similarity=0.061 Sum_probs=68.5
Q ss_pred CCCCcEEEEeC------CCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHH----HHHHHHH
Q 008371 151 CEKNPIVVVIP------GLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDL----RRVIDYL 220 (568)
Q Consensus 151 ~~~~PvVVllH------Gl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl----~~vi~~l 220 (568)
..++|.||+=| |++|-.. .+-+-...+.|+.|+.+.+.-. +.+. ...+|+ .++++.+
T Consensus 66 ~~krP~vViDPRAGHGpGIGGFK~----dSevG~AL~~GHPvYFV~F~p~-----P~pg----QTl~DV~~ae~~Fv~~V 132 (581)
T PF11339_consen 66 PTKRPFVVIDPRAGHGPGIGGFKP----DSEVGVALRAGHPVYFVGFFPE-----PEPG----QTLEDVMRAEAAFVEEV 132 (581)
T ss_pred CCCCCeEEeCCCCCCCCCccCCCc----ccHHHHHHHcCCCeEEEEecCC-----CCCC----CcHHHHHHHHHHHHHHH
Confidence 45678777754 5544332 2233344456999988865421 1111 123454 4566667
Q ss_pred HHHCCCC-cEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhh
Q 008371 221 HCQYPEV-PLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLI 268 (568)
Q Consensus 221 ~~~~~~~-~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~ 268 (568)
...+|.. +.++||.+.||..++.+++..|+ .+.-+|+-++|.+...
T Consensus 133 ~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd--~~gplvlaGaPlsywa 179 (581)
T PF11339_consen 133 AERHPDAPKPNLIGNCQGGWAAMMLAALRPD--LVGPLVLAGAPLSYWA 179 (581)
T ss_pred HHhCCCCCCceEEeccHHHHHHHHHHhcCcC--ccCceeecCCCccccc
Confidence 7777765 89999999999999999999999 6777777777776654
No 142
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.18 E-value=1.4e-05 Score=79.12 Aligned_cols=115 Identities=14% Similarity=0.081 Sum_probs=76.3
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCc--eEEEEcCCCCCCCCC-CCCCCCCCCcHHHHHHHHHHHHHHCCCC
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGW--NVVVSNHRGLGGISL-TSDCFYNGGWTEDLRRVIDYLHCQYPEV 227 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy--~Vvv~D~RG~G~S~~-~~~~~~~~~~~~Dl~~vi~~l~~~~~~~ 227 (568)
.+.+.++||+||+.. +-+.-+...++.....|+ .+++|.+|+.|.... ..++........++.+++..+....+..
T Consensus 15 ~~~~~vlvfVHGyn~-~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~ 93 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNN-SFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIK 93 (233)
T ss_pred CCCCeEEEEEeCCCC-CHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCc
Confidence 356789999999964 333333445444444444 799999999876321 1111111112367888888887776788
Q ss_pred cEEEEEecHHHHHHHHHHHhcCC-------CCCceEEEEEcCCCCh
Q 008371 228 PLYAVGTSIGANILVKYLGENGV-------NTPLVGAAAICSPWDL 266 (568)
Q Consensus 228 ~i~lvG~SmGG~ial~ya~~~~~-------~~~I~a~V~is~p~d~ 266 (568)
+|.+++||||+.+++..+..... ..++..+++++|-.+.
T Consensus 94 ~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 94 RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 99999999999999987654221 1257889988876665
No 143
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.17 E-value=7.6e-06 Score=88.60 Aligned_cols=140 Identities=16% Similarity=0.152 Sum_probs=96.8
Q ss_pred ceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCC
Q 008371 114 YKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (568)
Q Consensus 114 y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG 193 (568)
-+|..+...||..+.+..+...+ ...+..+|.++..+|.-|-+-..+++.--.-|.++|+..+..|-||
T Consensus 441 ~~r~~~~SkDGt~VPM~Iv~kk~-----------~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRG 509 (712)
T KOG2237|consen 441 VERIEVSSKDGTKVPMFIVYKKD-----------IKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRG 509 (712)
T ss_pred EEEEEEecCCCCccceEEEEech-----------hhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeecc
Confidence 35667778899888776655322 1235578999988886665544444433344567899999999999
Q ss_pred CCCCCCC---CCCCCC-CCcHHHHHHHHHHHHHHC--CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 194 LGGISLT---SDCFYN-GGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 194 ~G~S~~~---~~~~~~-~~~~~Dl~~vi~~l~~~~--~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
=|.-... ..+... ....+|+.+..++|..+. ...++.+.|.|.||.++.......|+ .+.++|+=.+-.|+
T Consensus 510 GGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPd--LF~avia~VpfmDv 586 (712)
T KOG2237|consen 510 GGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPD--LFGAVIAKVPFMDV 586 (712)
T ss_pred CcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCch--HhhhhhhcCcceeh
Confidence 7654321 122111 234589999999998763 34589999999999999999988888 67777665555554
No 144
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.17 E-value=1.6e-05 Score=86.84 Aligned_cols=139 Identities=15% Similarity=0.118 Sum_probs=100.3
Q ss_pred eEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCC
Q 008371 115 KRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGL 194 (568)
Q Consensus 115 ~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~ 194 (568)
+|...+..||.++.+..+...+. ..+...|+++..-|--|.+....+....-.|.++|+--....-||=
T Consensus 420 ~riwa~a~dgv~VPVSLvyrkd~-----------~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGG 488 (682)
T COG1770 420 RRIWATADDGVQVPVSLVYRKDT-----------KLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGG 488 (682)
T ss_pred EEEEEEcCCCcEeeEEEEEeccc-----------CCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecc
Confidence 44455668999887776654331 2356789999999988877666656666678899998888888996
Q ss_pred CCCCCC---CCCCCC-CCcHHHHHHHHHHHHHHC--CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 195 GGISLT---SDCFYN-GGWTEDLRRVIDYLHCQY--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 195 G~S~~~---~~~~~~-~~~~~Dl~~vi~~l~~~~--~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
|.-... ..+..+ .....|+.++.++|.+.. ....++++|-|.||+++...+.+.|+ .++++|+-.|-.|.
T Consensus 489 gelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~--lf~~iiA~VPFVDv 564 (682)
T COG1770 489 GELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPD--LFAGIIAQVPFVDV 564 (682)
T ss_pred cccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChh--hhhheeecCCccch
Confidence 643311 122222 123389999999998763 23479999999999999999999998 78888887665555
No 145
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.16 E-value=4.3e-06 Score=89.59 Aligned_cols=168 Identities=15% Similarity=0.203 Sum_probs=109.2
Q ss_pred CCCcEEEEeCCCC-CCchhHHHHHHHHHHHhCC--ceEEEEcCCC-CCCCCCCCCCCCCCCcHHHHHHHH----HHHHHH
Q 008371 152 EKNPIVVVIPGLT-SDSAAAYIKHLAFKMAGHG--WNVVVSNHRG-LGGISLTSDCFYNGGWTEDLRRVI----DYLHCQ 223 (568)
Q Consensus 152 ~~~PvVVllHGl~-G~s~~~y~~~l~~~l~~~G--y~Vvv~D~RG-~G~S~~~~~~~~~~~~~~Dl~~vi----~~l~~~ 223 (568)
...|++|+.||.. ....+.++..+-..+...| ..+..||++. +|+-.. ....+-+..+. ..+..+
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI-------~h~ae~~vSf~r~kvlei~ge 246 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANI-------KHAAEYSVSFDRYKVLEITGE 246 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcch-------HHHHHHHHHHhhhhhhhhhcc
Confidence 3568999999976 2222233344445554444 4667788775 454211 11122222332 334456
Q ss_pred CCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhc
Q 008371 224 YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVAR 303 (568)
Q Consensus 224 ~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 303 (568)
+|..+|+++|.|||+.+++.....+.+. -|+++|+|+-|.+.....+
T Consensus 247 fpha~IiLvGrsmGAlVachVSpsnsdv-~V~~vVCigypl~~vdgpr-------------------------------- 293 (784)
T KOG3253|consen 247 FPHAPIILVGRSMGALVACHVSPSNSDV-EVDAVVCIGYPLDTVDGPR-------------------------------- 293 (784)
T ss_pred CCCCceEEEecccCceeeEEeccccCCc-eEEEEEEecccccCCCccc--------------------------------
Confidence 7899999999999998888776655432 4899999877665532110
Q ss_pred cCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008371 304 LADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILA 383 (568)
Q Consensus 304 ~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~ 383 (568)
|.+ .+.+-.++.|+||+.|..|+.|+++..+....+......++
T Consensus 294 -------------------------gir-----------DE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elh 337 (784)
T KOG3253|consen 294 -------------------------GIR-----------DEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELH 337 (784)
T ss_pred -------------------------CCc-----------chhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEE
Confidence 000 12345688999999999999999987776555666778899
Q ss_pred EeCCCCcccccc
Q 008371 384 TTRHGGHLAFYE 395 (568)
Q Consensus 384 ~~~~GGH~~f~e 395 (568)
++.+++|..-.-
T Consensus 338 VI~~adhsmaip 349 (784)
T KOG3253|consen 338 VIGGADHSMAIP 349 (784)
T ss_pred EecCCCccccCC
Confidence 999999976543
No 146
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.14 E-value=8.2e-06 Score=79.66 Aligned_cols=108 Identities=19% Similarity=0.218 Sum_probs=48.7
Q ss_pred CCcEEEEeCCCCCCchhHHHH----HHHHHHHhCCceEEEEcCCCCC-----CCCC---------CCCCCCC--------
Q 008371 153 KNPIVVVIPGLTSDSAAAYIK----HLAFKMAGHGWNVVVSNHRGLG-----GISL---------TSDCFYN-------- 206 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~----~l~~~l~~~Gy~Vvv~D~RG~G-----~S~~---------~~~~~~~-------- 206 (568)
.++-|+++||++ ++.+.+ + .+...|.+.++..+.+|-+=-- -... .....|.
T Consensus 3 ~k~riLcLHG~~-~na~if-~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~ 80 (212)
T PF03959_consen 3 RKPRILCLHGYG-QNAEIF-RQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDD 80 (212)
T ss_dssp ---EEEEE--TT---HHHH-HHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-S
T ss_pred CCceEEEeCCCC-cCHHHH-HHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCc
Confidence 467799999994 455444 3 3444454437999988865311 1100 0011110
Q ss_pred ---CCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcC------CCCCceEEEEEcCCC
Q 008371 207 ---GGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENG------VNTPLVGAAAICSPW 264 (568)
Q Consensus 207 ---~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~------~~~~I~a~V~is~p~ 264 (568)
.+..+-+..+.+++.+..| =..++|||.||.+|..++.... ...+++.+|++|+..
T Consensus 81 ~~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~ 145 (212)
T PF03959_consen 81 HEYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFP 145 (212)
T ss_dssp GGG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES---
T ss_pred ccccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccC
Confidence 1122333444444444433 2589999999999998875431 123688999987643
No 147
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.10 E-value=3.4e-05 Score=76.92 Aligned_cols=126 Identities=20% Similarity=0.150 Sum_probs=88.8
Q ss_pred CCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHH--HHHH-hCCceEEEEcCC------
Q 008371 122 PDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLA--FKMA-GHGWNVVVSNHR------ 192 (568)
Q Consensus 122 ~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~--~~l~-~~Gy~Vvv~D~R------ 192 (568)
.+|....+..+.|+.. +.+.|+||++||-.+ +...+ .+.. +.++ +.||-|+.+|--
T Consensus 42 ~~g~~r~y~l~vP~g~-------------~~~apLvv~LHG~~~-sgag~-~~~sg~d~lAd~~gFlV~yPdg~~~~wn~ 106 (312)
T COG3509 42 VNGLKRSYRLYVPPGL-------------PSGAPLVVVLHGSGG-SGAGQ-LHGTGWDALADREGFLVAYPDGYDRAWNA 106 (312)
T ss_pred cCCCccceEEEcCCCC-------------CCCCCEEEEEecCCC-ChHHh-hcccchhhhhcccCcEEECcCccccccCC
Confidence 3577778888888763 345699999999865 34344 3332 3343 469999998422
Q ss_pred -CCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCC--cEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCC
Q 008371 193 -GLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEV--PLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (568)
Q Consensus 193 -G~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~--~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~ 264 (568)
|++.+..+.++.-..+.+.+++++++.+..++.-+ ++++.|.|-||.++..++.++++ .+.++..+++..
T Consensus 107 ~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~--~faa~A~VAg~~ 179 (312)
T COG3509 107 NGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPD--IFAAIAPVAGLL 179 (312)
T ss_pred CcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc--cccceeeeeccc
Confidence 23334333333333456678999999999998644 89999999999999999999998 677777776644
No 148
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.09 E-value=0.00018 Score=68.99 Aligned_cols=184 Identities=18% Similarity=0.217 Sum_probs=111.1
Q ss_pred CCcEEEEeCCCCCCchhHH---HHHHHHHHHhCCceEEEEcCCC------CCCCCC----CCCC---------------C
Q 008371 153 KNPIVVVIPGLTSDSAAAY---IKHLAFKMAGHGWNVVVSNHRG------LGGISL----TSDC---------------F 204 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y---~~~l~~~l~~~Gy~Vvv~D~RG------~G~S~~----~~~~---------------~ 204 (568)
.++-|+++||+.- +...+ ...+.+.+.+. +.++.+|-+- .-.+.. ..+. .
T Consensus 4 ~k~rvLcLHGfrQ-sg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQ-SGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCceEEEecchhh-ccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 4567999999964 33333 12444555554 7777777662 111110 0000 0
Q ss_pred CC--CCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHH--hcC----CCCCceEEEEEcCCCChhhhhHHHhHH
Q 008371 205 YN--GGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLG--ENG----VNTPLVGAAAICSPWDLLICDRFINRR 276 (568)
Q Consensus 205 ~~--~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~--~~~----~~~~I~a~V~is~p~d~~~~~~~~~~~ 276 (568)
.+ .++.+-+..+.+|+.++.|-+ .++|+|.|+.++..+++ ..+ ...+++-+|++++.. ... ..
T Consensus 82 ~~~~~~~eesl~yl~~~i~enGPFD--GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~-~~~------~~ 152 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENGPFD--GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFK-FPS------KK 152 (230)
T ss_pred cccccChHHHHHHHHHHHHHhCCCc--cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCC-CCc------ch
Confidence 00 122345778888888876543 79999999999998877 222 123567777775421 100 00
Q ss_pred HHHHHHHHHHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEE
Q 008371 277 LVQKCYDRVIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCI 356 (568)
Q Consensus 277 ~~~~~~~~~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI 356 (568)
++. ..+.+.|++|.|-|
T Consensus 153 ------------------------------------------~~~---------------------~~~~~~i~~PSLHi 169 (230)
T KOG2551|consen 153 ------------------------------------------LDE---------------------SAYKRPLSTPSLHI 169 (230)
T ss_pred ------------------------------------------hhh---------------------hhhccCCCCCeeEE
Confidence 000 11235789999999
Q ss_pred EeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhhcC
Q 008371 357 STLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTS 418 (568)
Q Consensus 357 ~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~~ 418 (568)
.|+.|.++|.+.... +....++. .++.-.|||+.- +..-+.+.+.+|+......
T Consensus 170 ~G~~D~iv~~~~s~~-L~~~~~~a-~vl~HpggH~VP------~~~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 170 FGETDTIVPSERSEQ-LAESFKDA-TVLEHPGGHIVP------NKAKYKEKIADFIQSFLQE 223 (230)
T ss_pred ecccceeecchHHHH-HHHhcCCC-eEEecCCCccCC------CchHHHHHHHHHHHHHHHh
Confidence 999999999876554 45555555 455556899763 3334778999999887754
No 149
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.06 E-value=0.0002 Score=88.00 Aligned_cols=99 Identities=14% Similarity=0.103 Sum_probs=68.3
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG 233 (568)
.|.++++||++|+ ...| ..++..+. .+++|+.++.+|+|.... .........+|+ ++.+....+..+++++|
T Consensus 1068 ~~~l~~lh~~~g~-~~~~-~~l~~~l~-~~~~v~~~~~~g~~~~~~--~~~~l~~la~~~---~~~i~~~~~~~p~~l~G 1139 (1296)
T PRK10252 1068 GPTLFCFHPASGF-AWQF-SVLSRYLD-PQWSIYGIQSPRPDGPMQ--TATSLDEVCEAH---LATLLEQQPHGPYHLLG 1139 (1296)
T ss_pred CCCeEEecCCCCc-hHHH-HHHHHhcC-CCCcEEEEECCCCCCCCC--CCCCHHHHHHHH---HHHHHhhCCCCCEEEEE
Confidence 4668999999764 3345 67888775 479999999999986532 111111222333 33344434556899999
Q ss_pred ecHHHHHHHHHHHhc---CCCCCceEEEEEcC
Q 008371 234 TSIGANILVKYLGEN---GVNTPLVGAAAICS 262 (568)
Q Consensus 234 ~SmGG~ial~ya~~~---~~~~~I~a~V~is~ 262 (568)
|||||.++..++.+. +. ++..++++++
T Consensus 1140 ~S~Gg~vA~e~A~~l~~~~~--~v~~l~l~~~ 1169 (1296)
T PRK10252 1140 YSLGGTLAQGIAARLRARGE--EVAFLGLLDT 1169 (1296)
T ss_pred echhhHHHHHHHHHHHHcCC--ceeEEEEecC
Confidence 999999999998753 44 6888888875
No 150
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.03 E-value=1.8e-05 Score=78.82 Aligned_cols=130 Identities=12% Similarity=0.034 Sum_probs=79.1
Q ss_pred CCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCC----ceEEEEcCCCCCC--C
Q 008371 124 GGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHG----WNVVVSNHRGLGG--I 197 (568)
Q Consensus 124 Gg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~G----y~Vvv~D~RG~G~--S 197 (568)
|....+..+.|++- ....+-|+|+++||..+.....-+......+.+.| .-+|+++.-+.+. +
T Consensus 5 g~~~~~~VylP~~y-----------~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~ 73 (251)
T PF00756_consen 5 GRDRRVWVYLPPGY-----------DPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYT 73 (251)
T ss_dssp TEEEEEEEEECTTG-----------GTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTS
T ss_pred CCeEEEEEEECCCC-----------CCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEeccccccccc
Confidence 45666666766541 22567799999999722111111223344344433 4566677655541 1
Q ss_pred CCCCC-----CCCCCCcH----HH-HHHHHHHHHHHCCCC--cEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCC
Q 008371 198 SLTSD-----CFYNGGWT----ED-LRRVIDYLHCQYPEV--PLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (568)
Q Consensus 198 ~~~~~-----~~~~~~~~----~D-l~~vi~~l~~~~~~~--~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d 265 (568)
....+ .....+.. +- ..+++.+|.++++.. +..++|+||||..++.++.++|+ .+.+++++|+.++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd--~F~~~~~~S~~~~ 151 (251)
T PF00756_consen 74 SWYLPAGSSRRADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD--LFGAVIAFSGALD 151 (251)
T ss_dssp BTTSSBCTTCBCTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT--TESEEEEESEESE
T ss_pred ccccccccccccccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc--ccccccccCcccc
Confidence 11101 01111111 22 257778888888632 27999999999999999999999 8999999987655
Q ss_pred h
Q 008371 266 L 266 (568)
Q Consensus 266 ~ 266 (568)
.
T Consensus 152 ~ 152 (251)
T PF00756_consen 152 P 152 (251)
T ss_dssp T
T ss_pred c
Confidence 4
No 151
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.97 E-value=6.5e-05 Score=73.64 Aligned_cols=112 Identities=14% Similarity=0.035 Sum_probs=53.2
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHh--CCceEEEEcCCCCCCCCCCCCCCCCCCcHHHH-HHHHHHHHHHCC-CCc
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAG--HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDL-RRVIDYLHCQYP-EVP 228 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~--~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl-~~vi~~l~~~~~-~~~ 228 (568)
+.-+||++||+.|+.. .+ +.+...+.. ..+.-..+...+.......+... .....+.+ .++.+.+..... ..+
T Consensus 3 ~~hLvV~vHGL~G~~~-d~-~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~g-I~~~g~rL~~eI~~~~~~~~~~~~~ 79 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPA-DM-RYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDG-IDVCGERLAEEILEHIKDYESKIRK 79 (217)
T ss_pred CCEEEEEeCCCCCCHH-HH-HHHHHHHHHhhhhcchhhhhhhcccccccccchh-hHHHHHHHHHHHHHhcccccccccc
Confidence 3457999999988644 33 445555544 12221222222221111000000 00011222 222222222212 258
Q ss_pred EEEEEecHHHHHHHHHHHhcCCC----------CCceEEEEEcCCCChh
Q 008371 229 LYAVGTSIGANILVKYLGENGVN----------TPLVGAAAICSPWDLL 267 (568)
Q Consensus 229 i~lvG~SmGG~ial~ya~~~~~~----------~~I~a~V~is~p~d~~ 267 (568)
|.+|||||||.++-.++...... ......+.++.|.-..
T Consensus 80 IsfIgHSLGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~ 128 (217)
T PF05057_consen 80 ISFIGHSLGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGS 128 (217)
T ss_pred ceEEEecccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCC
Confidence 99999999999987555432211 0344566677776543
No 152
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.94 E-value=4.2e-05 Score=74.41 Aligned_cols=109 Identities=20% Similarity=0.296 Sum_probs=78.1
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhCC-----ceEEEEcCCCC----CCCCCCC--C---------CCCCCCcHHHH
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHG-----WNVVVSNHRGL----GGISLTS--D---------CFYNGGWTEDL 213 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~G-----y~Vvv~D~RG~----G~S~~~~--~---------~~~~~~~~~Dl 213 (568)
-| .||+||..|+.. . +..++.++...+ --++..|--|- |.-+... | +.....+..-+
T Consensus 46 iP-TIfIhGsgG~as-S-~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wl 122 (288)
T COG4814 46 IP-TIFIHGSGGTAS-S-LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWL 122 (288)
T ss_pred cc-eEEEecCCCChh-H-HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHH
Confidence 35 589999977443 3 478888887754 13555665551 1111110 1 11112345678
Q ss_pred HHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCC---CCceEEEEEcCCCC
Q 008371 214 RRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVN---TPLVGAAAICSPWD 265 (568)
Q Consensus 214 ~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~---~~I~a~V~is~p~d 265 (568)
..++.+|.++|.-..+.+|||||||.-+..|+..++.+ +++...|++++|++
T Consensus 123 k~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 123 KKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 99999999999999999999999999999999998764 36999999999987
No 153
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.93 E-value=0.00033 Score=72.38 Aligned_cols=114 Identities=14% Similarity=0.216 Sum_probs=76.9
Q ss_pred CCCCcEEEEeCCCCCCch-hHHHHHHHHHHHhCCceEEEEcCCC--CCCCCCCC-----------CCCCC----------
Q 008371 151 CEKNPIVVVIPGLTSDSA-AAYIKHLAFKMAGHGWNVVVSNHRG--LGGISLTS-----------DCFYN---------- 206 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~-~~y~~~l~~~l~~~Gy~Vvv~D~RG--~G~S~~~~-----------~~~~~---------- 206 (568)
...+..||++||.+.+.+ ...+..+-..|.++||..+.+..+. ....+... .....
T Consensus 84 ~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 163 (310)
T PF12048_consen 84 AKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASA 163 (310)
T ss_pred CCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccc
Confidence 456778999999865443 3556788889999999999999988 21111000 00000
Q ss_pred ----------CCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 207 ----------GGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 207 ----------~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
.....-+.++++++.+ ++..+++++||..|+.++++|+.+.+.. .++++|+|++.+..
T Consensus 164 ~~~~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~-~~daLV~I~a~~p~ 231 (310)
T PF12048_consen 164 QEAEAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPP-MPDALVLINAYWPQ 231 (310)
T ss_pred cHhHHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCc-ccCeEEEEeCCCCc
Confidence 0111344555555544 4555699999999999999999998752 48999999876543
No 154
>PRK04940 hypothetical protein; Provisional
Probab=97.92 E-value=0.00038 Score=65.54 Aligned_cols=35 Identities=9% Similarity=-0.078 Sum_probs=28.9
Q ss_pred CcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 227 VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 227 ~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
.++.+||.||||+.|..++.+++- .+|+|+|....
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~-----~aVLiNPAv~P 94 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGI-----RQVIFNPNLFP 94 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCC-----CEEEECCCCCh
Confidence 479999999999999999988864 56778886655
No 155
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.92 E-value=8.6e-05 Score=74.16 Aligned_cols=103 Identities=15% Similarity=0.092 Sum_probs=77.7
Q ss_pred cEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEe
Q 008371 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (568)
Q Consensus 155 PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~ 234 (568)
|+++++||..| +...| ..++..+... +.|+.++.||.|...-. ....-+-+...++.|++..|..|++++|+
T Consensus 1 ~pLF~fhp~~G-~~~~~-~~L~~~l~~~-~~v~~l~a~g~~~~~~~-----~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~ 72 (257)
T COG3319 1 PPLFCFHPAGG-SVLAY-APLAAALGPL-LPVYGLQAPGYGAGEQP-----FASLDDMAAAYVAAIRRVQPEGPYVLLGW 72 (257)
T ss_pred CCEEEEcCCCC-cHHHH-HHHHHHhccC-ceeeccccCcccccccc-----cCCHHHHHHHHHHHHHHhCCCCCEEEEee
Confidence 46899999866 44455 6788888765 99999999998853211 12233456778888888889999999999
Q ss_pred cHHHHHHHHHHHhcCC-CCCceEEEEEcCCCC
Q 008371 235 SIGANILVKYLGENGV-NTPLVGAAAICSPWD 265 (568)
Q Consensus 235 SmGG~ial~ya~~~~~-~~~I~a~V~is~p~d 265 (568)
|+||+++...|.+-.. ...|..+++++++..
T Consensus 73 S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 73 SLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred ccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 9999999988765321 116999999998776
No 156
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.88 E-value=0.00022 Score=68.01 Aligned_cols=108 Identities=23% Similarity=0.280 Sum_probs=82.1
Q ss_pred CCcEEEEeCCCCCCc-hhHHHHHHHHHHHhCCceEEEEcCC----CCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCC
Q 008371 153 KNPIVVVIPGLTSDS-AAAYIKHLAFKMAGHGWNVVVSNHR----GLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEV 227 (568)
Q Consensus 153 ~~PvVVllHGl~G~s-~~~y~~~l~~~l~~~Gy~Vvv~D~R----G~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~ 227 (568)
.+-.|||+-|++.+- ...|...++.++-+.+|..+-+-.| |+|.++. ....+|+..+++||...--..
T Consensus 35 ~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~sl-------k~D~edl~~l~~Hi~~~~fSt 107 (299)
T KOG4840|consen 35 ESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSL-------KDDVEDLKCLLEHIQLCGFST 107 (299)
T ss_pred eEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccc-------cccHHHHHHHHHHhhccCccc
Confidence 345689999985332 2567888999999999999988876 4554443 345699999999997664455
Q ss_pred cEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChh
Q 008371 228 PLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (568)
Q Consensus 228 ~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~ 267 (568)
.++++|||-|..=.+.|+...-....|.++|+.+|..|-.
T Consensus 108 ~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 108 DVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred ceEEEecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 8999999999999999995443333688999888777654
No 157
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.79 E-value=6.4e-05 Score=82.83 Aligned_cols=126 Identities=18% Similarity=0.111 Sum_probs=77.9
Q ss_pred CEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCC---CCchhHHHHHHHHHHHhC--CceEEEEcCC-C-CCCC
Q 008371 125 GTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT---SDSAAAYIKHLAFKMAGH--GWNVVVSNHR-G-LGGI 197 (568)
Q Consensus 125 g~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~---G~s~~~y~~~l~~~l~~~--Gy~Vvv~D~R-G-~G~S 197 (568)
.-+.++.+.|... ....+.|+||++||-+ |+.. .+ ....++++ |+.|+.+|+| | .|.-
T Consensus 77 dcl~l~i~~p~~~-----------~~~~~~pv~v~ihGG~~~~g~~~-~~---~~~~~~~~~~~~~vv~~~yRlg~~g~~ 141 (493)
T cd00312 77 DCLYLNVYTPKNT-----------KPGNSLPVMVWIHGGGFMFGSGS-LY---PGDGLAREGDNVIVVSINYRLGVLGFL 141 (493)
T ss_pred cCCeEEEEeCCCC-----------CCCCCCCEEEEEcCCccccCCCC-CC---ChHHHHhcCCCEEEEEecccccccccc
Confidence 3566777766431 0135679999999931 2222 11 12333333 3999999999 5 3322
Q ss_pred CCCCCCCCCCCcHHHHHHHHHHHHHH---C--CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCC
Q 008371 198 SLTSDCFYNGGWTEDLRRVIDYLHCQ---Y--PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (568)
Q Consensus 198 ~~~~~~~~~~~~~~Dl~~vi~~l~~~---~--~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d 265 (568)
...........-..|...+++|+++. + ...+|.++|+|.||..+..++........++++|+.++...
T Consensus 142 ~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 142 STGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred cCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 11111111111248999999999875 2 24589999999999999877766433336888888887554
No 158
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.63 E-value=0.00045 Score=67.57 Aligned_cols=59 Identities=20% Similarity=0.215 Sum_probs=45.8
Q ss_pred eEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhh
Q 008371 353 LLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALN 416 (568)
Q Consensus 353 vLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~ 416 (568)
+.++.+++|..+|....+. ..+.-|++++...+ |||+.-+- -....+.++|.+-|+.+.
T Consensus 309 ~ivv~A~~D~Yipr~gv~~-lQ~~WPg~eVr~~e-gGHVsayl---~k~dlfRR~I~d~L~R~~ 367 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRS-LQEIWPGCEVRYLE-GGHVSAYL---FKQDLFRRAIVDGLDRLD 367 (371)
T ss_pred EEEEEecCCccccccCcHH-HHHhCCCCEEEEee-cCceeeee---hhchHHHHHHHHHHHhhh
Confidence 5778899999999876654 67788999999998 89987543 133467899999888754
No 159
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.60 E-value=0.001 Score=64.80 Aligned_cols=110 Identities=17% Similarity=0.256 Sum_probs=79.4
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhC---CceEEEEcCCCCCCCCCCC---CCCC---CCCcHHHHHHHHHHHH
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGH---GWNVVVSNHRGLGGISLTS---DCFY---NGGWTEDLRRVIDYLH 221 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~---Gy~Vvv~D~RG~G~S~~~~---~~~~---~~~~~~Dl~~vi~~l~ 221 (568)
...++.+++++|.+|.. .|...++..|... ...++.+-+.||.+-+... .... ..+..+.+..-+++++
T Consensus 26 ~~~~~li~~IpGNPG~~--gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik 103 (301)
T KOG3975|consen 26 GEDKPLIVWIPGNPGLL--GFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIK 103 (301)
T ss_pred CCCceEEEEecCCCCch--hHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHH
Confidence 35789999999999843 4457788887653 2569999999998766211 1111 1223467788888888
Q ss_pred HHCC-CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcC
Q 008371 222 CQYP-EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICS 262 (568)
Q Consensus 222 ~~~~-~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~ 262 (568)
...| +.+++++|||.|+++.++.+-......+|..++++=|
T Consensus 104 ~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFP 145 (301)
T KOG3975|consen 104 EYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFP 145 (301)
T ss_pred HhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecc
Confidence 8776 5689999999999999999886555456888887755
No 160
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.58 E-value=0.00074 Score=72.52 Aligned_cols=123 Identities=10% Similarity=0.025 Sum_probs=75.1
Q ss_pred CCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCc----eEEEEcCCCCCCCCC
Q 008371 124 GGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGW----NVVVSNHRGLGGISL 199 (568)
Q Consensus 124 Gg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy----~Vvv~D~RG~G~S~~ 199 (568)
|.+..+..|.|++. . ..+.|+|+++||-.- .....+...+..+.++|. .+|.+|..+.. ..
T Consensus 191 g~~r~v~VY~P~~y-----------~-~~~~PvlyllDG~~w-~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~--~R 255 (411)
T PRK10439 191 GNSRRVWIYTTGDA-----------A-PEERPLAILLDGQFW-AESMPVWPALDSLTHRGQLPPAVYLLIDAIDTT--HR 255 (411)
T ss_pred CCceEEEEEECCCC-----------C-CCCCCEEEEEECHHh-hhcCCHHHHHHHHHHcCCCCceEEEEECCCCcc--cc
Confidence 55566666666431 1 346799999999431 111112345566666663 45677753211 11
Q ss_pred CCCCCCCCCcHHHH-HHHHHHHHHHCC----CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCC
Q 008371 200 TSDCFYNGGWTEDL-RRVIDYLHCQYP----EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (568)
Q Consensus 200 ~~~~~~~~~~~~Dl-~~vi~~l~~~~~----~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p 263 (568)
.........+.+.+ .+++-++.++|+ ..+.++.|+||||..++..+.++|+ .+.+++++++.
T Consensus 256 ~~el~~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd--~Fg~v~s~Sgs 322 (411)
T PRK10439 256 SQELPCNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPE--RFGCVLSQSGS 322 (411)
T ss_pred cccCCchHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcc--cccEEEEeccc
Confidence 00101111222333 566677777765 2468999999999999999999999 89999999875
No 161
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.57 E-value=0.00041 Score=71.25 Aligned_cols=114 Identities=17% Similarity=0.195 Sum_probs=79.1
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCc--eEEEEcCCCCCCCC-CCCCCCCCCCcHHHHHHHHHHHHHHCCCCc
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGW--NVVVSNHRGLGGIS-LTSDCFYNGGWTEDLRRVIDYLHCQYPEVP 228 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy--~Vvv~D~RG~G~S~-~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~ 228 (568)
..+-++||+||+..+ -+.-...+++.....|+ .+++|-++..|..- ...++..+.....+++.++.+|..+.+..+
T Consensus 114 ~~k~vlvFvHGfNnt-f~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~ 192 (377)
T COG4782 114 SAKTVLVFVHGFNNT-FEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKR 192 (377)
T ss_pred CCCeEEEEEcccCCc-hhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCce
Confidence 567789999999643 33333456676666664 78899999877532 112222222234799999999999888889
Q ss_pred EEEEEecHHHHHHHHHHHhc---CC---CCCceEEEEEcCCCCh
Q 008371 229 LYAVGTSIGANILVKYLGEN---GV---NTPLVGAAAICSPWDL 266 (568)
Q Consensus 229 i~lvG~SmGG~ial~ya~~~---~~---~~~I~a~V~is~p~d~ 266 (568)
|++++||||..+++..+.+. +. +.+|+-+|+-++-.|.
T Consensus 193 I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 193 IYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred EEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 99999999999998776542 11 2257777877766555
No 162
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.56 E-value=0.00057 Score=74.10 Aligned_cols=111 Identities=24% Similarity=0.279 Sum_probs=71.2
Q ss_pred CCcEEEEeCCCCCCchhHHHH-HHHHHHHh-CCceEEEEcCCCCCCCCCCCCCC-------CCCCcHHHHHHHHHHHHHH
Q 008371 153 KNPIVVVIPGLTSDSAAAYIK-HLAFKMAG-HGWNVVVSNHRGLGGISLTSDCF-------YNGGWTEDLRRVIDYLHCQ 223 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~-~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~-------~~~~~~~Dl~~vi~~l~~~ 223 (568)
..|++|++-|= |.-...++. .++..+++ .|=-++++.||-+|.|....+.. ......+|+..++++++.+
T Consensus 28 ~gpifl~~ggE-~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYIGGE-GPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE--S-S-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 37887877663 433322322 23444443 47789999999999997543211 1122347999999999977
Q ss_pred C---CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 224 Y---PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 224 ~---~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
+ +..|++++|-|+||+++.-+-.++|+ .+.|+++-++|...
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~--~~~ga~ASSapv~a 150 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPH--LFDGAWASSAPVQA 150 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TT--T-SEEEEET--CCH
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCC--eeEEEEeccceeee
Confidence 6 45689999999999999999999999 89999998888754
No 163
>PLN02606 palmitoyl-protein thioesterase
Probab=97.51 E-value=0.004 Score=63.20 Aligned_cols=107 Identities=11% Similarity=0.090 Sum_probs=65.6
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHh-CCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCC-CCcEE
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAG-HGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYP-EVPLY 230 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~-~~~i~ 230 (568)
..| ||+.||++.+....-+..+.+.+.+ .|+-+..+- .|-+. ...+.....+.+..+.+.++..-. ..-+.
T Consensus 26 ~~P-vViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~-----~~s~~~~~~~Qv~~vce~l~~~~~L~~G~n 98 (306)
T PLN02606 26 SVP-FVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGV-----QDSLFMPLRQQASIACEKIKQMKELSEGYN 98 (306)
T ss_pred CCC-EEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCc-----ccccccCHHHHHHHHHHHHhcchhhcCceE
Confidence 345 7888999522222245677777752 365444433 23111 111212234566666666654210 12499
Q ss_pred EEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 231 AVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 231 lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
++|+|.||.++=.++.+.+...+|+-.|++++|-..
T Consensus 99 aIGfSQGglflRa~ierc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 99 IVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred EEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcCC
Confidence 999999999999999998764479999999986543
No 164
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=97.46 E-value=0.00093 Score=63.68 Aligned_cols=57 Identities=11% Similarity=0.036 Sum_probs=40.1
Q ss_pred ccceEEEEeCCCCCCCCCCcch---HHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHH
Q 008371 350 SVPLLCISTLDDPVCTREAIPW---DECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (568)
Q Consensus 350 ~vPvLiI~G~dDpivp~~~~~~---~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~ 414 (568)
..|++.-||++|++||..-... .+......+++..+++-+|-...+ -.+.+..|+.+
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~--------e~~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQ--------ELDDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccccccHH--------HHHHHHHHHHH
Confidence 6899999999999999762221 123333348999999999976554 22566777765
No 165
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.40 E-value=0.00064 Score=64.51 Aligned_cols=129 Identities=22% Similarity=0.401 Sum_probs=72.7
Q ss_pred CEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHH--HHHHHHHhCCceEEEEcC--CCC---CCC
Q 008371 125 GTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIK--HLAFKMAGHGWNVVVSNH--RGL---GGI 197 (568)
Q Consensus 125 g~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~--~l~~~l~~~Gy~Vvv~D~--RG~---G~S 197 (568)
-.+.+..|.|++. +.+.+-|++.++-|++. ..+.++. .+...+.++|+.||.+|- ||. |..
T Consensus 26 c~Mtf~vylPp~a-----------~~~k~~P~lf~LSGLTC-T~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~ 93 (283)
T KOG3101|consen 26 CSMTFGVYLPPDA-----------PRGKRCPVLFYLSGLTC-THENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDD 93 (283)
T ss_pred cceEEEEecCCCc-----------ccCCcCceEEEecCCcc-cchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCc
Confidence 3456667777653 22455799999999985 4555654 344556778999999994 553 222
Q ss_pred CC----CCCCCCC----CCcHHHHHHHHHHHHHHCC-----------CCcEEEEEecHHHHHHHHHHHhcCCC-CCceEE
Q 008371 198 SL----TSDCFYN----GGWTEDLRRVIDYLHCQYP-----------EVPLYAVGTSIGANILVKYLGENGVN-TPLVGA 257 (568)
Q Consensus 198 ~~----~~~~~~~----~~~~~Dl~~vi~~l~~~~~-----------~~~i~lvG~SmGG~ial~ya~~~~~~-~~I~a~ 257 (568)
+- ....+|. +.|.. --.+.+|+.+..| ..++.+.||||||.=|+-.+.+.+.. ..+.+.
T Consensus 94 eswDFG~GAGFYvnAt~epw~~-~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAF 172 (283)
T KOG3101|consen 94 ESWDFGQGAGFYVNATQEPWAK-HYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAF 172 (283)
T ss_pred ccccccCCceeEEecccchHhh-hhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceecc
Confidence 10 0011111 11111 1223334433321 34689999999999887655554441 136666
Q ss_pred EEEcCCCCh
Q 008371 258 AAICSPWDL 266 (568)
Q Consensus 258 V~is~p~d~ 266 (568)
.-|+.|...
T Consensus 173 API~NP~~c 181 (283)
T KOG3101|consen 173 APICNPINC 181 (283)
T ss_pred ccccCcccC
Confidence 666666544
No 166
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.40 E-value=0.00051 Score=71.85 Aligned_cols=105 Identities=20% Similarity=0.253 Sum_probs=75.8
Q ss_pred EEEEeCCCCCCchhHHHHHHHHHHHhCCce---EEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEE
Q 008371 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWN---VVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAV 232 (568)
Q Consensus 156 vVVllHGl~G~s~~~y~~~l~~~l~~~Gy~---Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lv 232 (568)
.++++||+.+ ....+ ..+...+...||. +..+++.+-.. .. + .....+-+...++.+....+..++.++
T Consensus 61 pivlVhG~~~-~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~--~---~~~~~~ql~~~V~~~l~~~ga~~v~Li 132 (336)
T COG1075 61 PIVLVHGLGG-GYGNF-LPLDYRLAILGWLTNGVYAFELSGGDG-TY--S---LAVRGEQLFAYVDEVLAKTGAKKVNLI 132 (336)
T ss_pred eEEEEccCcC-Ccchh-hhhhhhhcchHHHhcccccccccccCC-Cc--c---ccccHHHHHHHHHHHHhhcCCCceEEE
Confidence 4899999844 44444 5677777777887 88888886511 11 1 122335566666666666667899999
Q ss_pred EecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChhh
Q 008371 233 GTSIGANILVKYLGENGVNTPLVGAAAICSPWDLLI 268 (568)
Q Consensus 233 G~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~~ 268 (568)
||||||.++..|++..+....|+.++.+++|-....
T Consensus 133 gHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~ 168 (336)
T COG1075 133 GHSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTE 168 (336)
T ss_pred eecccchhhHHHHhhcCccceEEEEEEeccCCCCch
Confidence 999999999988988885558999999998765543
No 167
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.38 E-value=0.00059 Score=72.84 Aligned_cols=114 Identities=21% Similarity=0.173 Sum_probs=74.7
Q ss_pred CCCCcEEEEeCCC--CCCchhHHHHHHHHHHHhCC-ceEEEEcCCC--CCCCCC---CCCCCCC-CCcHHHHHHHHHHHH
Q 008371 151 CEKNPIVVVIPGL--TSDSAAAYIKHLAFKMAGHG-WNVVVSNHRG--LGGISL---TSDCFYN-GGWTEDLRRVIDYLH 221 (568)
Q Consensus 151 ~~~~PvVVllHGl--~G~s~~~y~~~l~~~l~~~G-y~Vvv~D~RG--~G~S~~---~~~~~~~-~~~~~Dl~~vi~~l~ 221 (568)
.++.|+||++||- .+++.+.. ..--..|+++| +-||.+|||= +|--.. ...+.+. .--..|...+++|++
T Consensus 91 a~~~PVmV~IHGG~y~~Gs~s~~-~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~ 169 (491)
T COG2272 91 AEKLPVMVYIHGGGYIMGSGSEP-LYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVR 169 (491)
T ss_pred CCCCcEEEEEeccccccCCCccc-ccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHH
Confidence 3567999999983 22232221 12345577777 9999999993 443322 2112211 123489999999998
Q ss_pred HH---CC--CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCC
Q 008371 222 CQ---YP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (568)
Q Consensus 222 ~~---~~--~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d 265 (568)
+. ++ ..+|.++|+|.||+.++.+++--.-+..++.+|+.|++..
T Consensus 170 ~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 170 DNIEAFGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHhCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 75 33 3479999999999999987776333335778888877664
No 168
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.27 E-value=0.0012 Score=66.32 Aligned_cols=74 Identities=19% Similarity=0.151 Sum_probs=48.4
Q ss_pred cccccCCCc-cceEEEEeCCCCCCCCCCcchHHHhcCC-CEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhh
Q 008371 342 SANFVRNVS-VPLLCISTLDDPVCTREAIPWDECRANE-KIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALN 416 (568)
Q Consensus 342 ~~~~l~~I~-vPvLiI~G~dDpivp~~~~~~~~~~~~~-~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~ 416 (568)
....+.+++ +|+|+++|.+|.++|............. +.....+++++|...... .+......+.+.+|+.+.+
T Consensus 223 ~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 223 PFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDN-PPAVEQALDKLAEFLERHL 298 (299)
T ss_pred chhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCc-cHHHHHHHHHHHHHHHHhc
Confidence 334455665 8999999999999998755443222222 678888889999876531 0111135578888887643
No 169
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.15 E-value=0.0012 Score=71.64 Aligned_cols=160 Identities=17% Similarity=0.037 Sum_probs=97.4
Q ss_pred CCchhhHHhhhhhhcC-CCCCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHH
Q 008371 93 LSSPHLQTAFLTFFGR-APDISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAY 171 (568)
Q Consensus 93 l~~ghlqT~~~~~~~~-~p~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y 171 (568)
+....++++=.....- .....-+...-+..||..|.+-... .+. ..+ +.|++|.--|..+-+....
T Consensus 372 ~~~~eLe~ik~~p~~FDa~~~~veQ~~atSkDGT~IPYFiv~-K~~-----------~~d-~~pTll~aYGGF~vsltP~ 438 (648)
T COG1505 372 LFGGELEVIREQPVQFDADNYEVEQFFATSKDGTRIPYFIVR-KGA-----------KKD-ENPTLLYAYGGFNISLTPR 438 (648)
T ss_pred cCCceehhhhhccCCcCccCceEEEEEEEcCCCccccEEEEe-cCC-----------cCC-CCceEEEeccccccccCCc
Confidence 4444466553222111 1223334445566799999886554 231 113 6788776665333333222
Q ss_pred HHHHHHHHHhCCceEEEEcCCCCCCCCCC--C--CCCCCCCcHHHHHHHHHHHHHHCC--CCcEEEEEecHHHHHHHHHH
Q 008371 172 IKHLAFKMAGHGWNVVVSNHRGLGGISLT--S--DCFYNGGWTEDLRRVIDYLHCQYP--EVPLYAVGTSIGANILVKYL 245 (568)
Q Consensus 172 ~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~--~--~~~~~~~~~~Dl~~vi~~l~~~~~--~~~i~lvG~SmGG~ial~ya 245 (568)
.........++|..-+.-|.||=|.-... . -+.....-.+|..++.+.+.++.- .+++.+.|-|=||.++-..+
T Consensus 439 fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~al 518 (648)
T COG1505 439 FSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAAL 518 (648)
T ss_pred cchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeee
Confidence 23344666788999999999996643210 0 011112233899999999988742 34799999999999998888
Q ss_pred HhcCCCCCceEEEEEcCCCChh
Q 008371 246 GENGVNTPLVGAAAICSPWDLL 267 (568)
Q Consensus 246 ~~~~~~~~I~a~V~is~p~d~~ 267 (568)
.+.|+ .+.++|+-.|-.|+.
T Consensus 519 TQrPe--lfgA~v~evPllDMl 538 (648)
T COG1505 519 TQRPE--LFGAAVCEVPLLDML 538 (648)
T ss_pred ccChh--hhCceeeccchhhhh
Confidence 88888 566666554555554
No 170
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=97.15 E-value=0.0048 Score=58.59 Aligned_cols=88 Identities=15% Similarity=0.108 Sum_probs=58.9
Q ss_pred hhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHh
Q 008371 168 AAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGE 247 (568)
Q Consensus 168 ~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~ 247 (568)
...| ..++..+.. ++.|+.+|.+|++.+.... ....+......+.+....+..+++++|||+||.++...+..
T Consensus 12 ~~~~-~~~~~~l~~-~~~v~~~~~~g~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~ 84 (212)
T smart00824 12 PHEY-ARLAAALRG-RRDVSALPLPGFGPGEPLP-----ASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAAR 84 (212)
T ss_pred HHHH-HHHHHhcCC-CccEEEecCCCCCCCCCCC-----CCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHH
Confidence 3344 567777754 6899999999998654321 11222333445556666667789999999999999887775
Q ss_pred cCC-CCCceEEEEEcC
Q 008371 248 NGV-NTPLVGAAAICS 262 (568)
Q Consensus 248 ~~~-~~~I~a~V~is~ 262 (568)
... ...+.+++++++
T Consensus 85 l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 85 LEARGIPPAAVVLLDT 100 (212)
T ss_pred HHhCCCCCcEEEEEcc
Confidence 322 125788877765
No 171
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.11 E-value=0.00081 Score=71.82 Aligned_cols=88 Identities=13% Similarity=0.119 Sum_probs=67.7
Q ss_pred HHHHHHHHHHhCCceE------EEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHH
Q 008371 171 YIKHLAFKMAGHGWNV------VVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKY 244 (568)
Q Consensus 171 y~~~l~~~l~~~Gy~V------vv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~y 244 (568)
++..+++.|.+.||.. .-+|+|=--. ....+...++..|+.+.+.. +.++++|||||||.++..+
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~--------~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~f 136 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA--------ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYF 136 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh--------hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHH
Confidence 5688999999888753 2267773211 12345578999999888877 7899999999999999999
Q ss_pred HHhcCCC----CCceEEEEEcCCCChh
Q 008371 245 LGENGVN----TPLVGAAAICSPWDLL 267 (568)
Q Consensus 245 a~~~~~~----~~I~a~V~is~p~d~~ 267 (568)
+...+.. ..|++.|.+++|+...
T Consensus 137 l~~~~~~~W~~~~i~~~i~i~~p~~Gs 163 (389)
T PF02450_consen 137 LQWMPQEEWKDKYIKRFISIGTPFGGS 163 (389)
T ss_pred HHhccchhhHHhhhhEEEEeCCCCCCC
Confidence 9887542 3699999999998653
No 172
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.10 E-value=0.0045 Score=58.89 Aligned_cols=115 Identities=14% Similarity=0.119 Sum_probs=78.1
Q ss_pred CCCcEEEEeCCCCCCchhHHHH--------------HHHHHHHhCCceEEEEcCCCCCC--CCCCCCCCCCCCcHHHHHH
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIK--------------HLAFKMAGHGWNVVVSNHRGLGG--ISLTSDCFYNGGWTEDLRR 215 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~--------------~l~~~l~~~Gy~Vvv~D~RG~G~--S~~~~~~~~~~~~~~Dl~~ 215 (568)
.....+|++||-+--....|.+ .+++.+.+.||.|+++|---+-. .....+..|...-.+.+..
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 3456899999964222234433 35677788899999998642211 0112344444445566666
Q ss_pred HHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 216 VIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 216 vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
+..++........+++|.||+||...+.++.+.+...+|.++.+-++++..
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 666665544456799999999999999999999987788888887777443
No 173
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.09 E-value=0.012 Score=57.18 Aligned_cols=77 Identities=21% Similarity=0.275 Sum_probs=48.4
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhCCce-EEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEE
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWN-VVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAV 232 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~-Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lv 232 (568)
.-+||++.||+. ..+.+ .++. ...+|. ++++|||..--. .| + .. ...+.+|
T Consensus 11 ~~LilfF~GWg~-d~~~f-~hL~---~~~~~D~l~~yDYr~l~~d-------------~~-------~-~~--y~~i~lv 62 (213)
T PF04301_consen 11 KELILFFAGWGM-DPSPF-SHLI---LPENYDVLICYDYRDLDFD-------------FD-------L-SG--YREIYLV 62 (213)
T ss_pred CeEEEEEecCCC-ChHHh-hhcc---CCCCccEEEEecCcccccc-------------cc-------c-cc--CceEEEE
Confidence 468999999953 33222 3221 233453 567888854310 01 1 12 3479999
Q ss_pred EecHHHHHHHHHHHhcCCCCCceEEEEEcC
Q 008371 233 GTSIGANILVKYLGENGVNTPLVGAAAICS 262 (568)
Q Consensus 233 G~SmGG~ial~ya~~~~~~~~I~a~V~is~ 262 (568)
|+|||-.+|.+++... +++..|+|++
T Consensus 63 AWSmGVw~A~~~l~~~----~~~~aiAING 88 (213)
T PF04301_consen 63 AWSMGVWAANRVLQGI----PFKRAIAING 88 (213)
T ss_pred EEeHHHHHHHHHhccC----CcceeEEEEC
Confidence 9999999998877643 4777888876
No 174
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.05 E-value=0.0012 Score=73.12 Aligned_cols=125 Identities=22% Similarity=0.112 Sum_probs=73.3
Q ss_pred CEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCC---CCch-hHHHHHHHHHHHhCCceEEEEcCCC--CCCCC
Q 008371 125 GTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT---SDSA-AAYIKHLAFKMAGHGWNVVVSNHRG--LGGIS 198 (568)
Q Consensus 125 g~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~---G~s~-~~y~~~l~~~l~~~Gy~Vvv~D~RG--~G~S~ 198 (568)
.-|.++.+.|.... ...+.|++|++||.+ |++. ..| .-...+++++.-||.+|||= +|--.
T Consensus 107 DCL~LnI~~P~~~~-----------~~~~lPV~v~ihGG~f~~G~~~~~~~--~~~~~~~~~~vivVt~nYRlg~~Gfl~ 173 (535)
T PF00135_consen 107 DCLYLNIYTPSNAS-----------SNSKLPVMVWIHGGGFMFGSGSFPPY--DGASLAASKDVIVVTINYRLGAFGFLS 173 (535)
T ss_dssp ---EEEEEEETSSS-----------STTSEEEEEEE--STTTSSCTTSGGG--HTHHHHHHHTSEEEEE----HHHHH-B
T ss_pred hHHHHhhhhccccc-----------cccccceEEEeecccccCCCcccccc--cccccccCCCEEEEEeccccccccccc
Confidence 35778888775521 122679999999932 3221 233 23445667899999999993 33221
Q ss_pred CCCCCC--CCCCcHHHHHHHHHHHHHH---CC--CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCC
Q 008371 199 LTSDCF--YNGGWTEDLRRVIDYLHCQ---YP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (568)
Q Consensus 199 ~~~~~~--~~~~~~~Dl~~vi~~l~~~---~~--~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p 263 (568)
...... .+. -..|...+++|+++. ++ ..+|.++|+|.||..+...+.....+..++++|+.++.
T Consensus 174 ~~~~~~~~gN~-Gl~Dq~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 174 LGDLDAPSGNY-GLLDQRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp SSSTTSHBSTH-HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred ccccccCchhh-hhhhhHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccc
Confidence 111111 111 237999999999976 33 34799999999999988766654334479999999873
No 175
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=96.91 E-value=0.0082 Score=62.91 Aligned_cols=110 Identities=15% Similarity=0.135 Sum_probs=69.5
Q ss_pred CCcEEEEeCCCC---CCchh--HHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCC
Q 008371 153 KNPIVVVIPGLT---SDSAA--AYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEV 227 (568)
Q Consensus 153 ~~PvVVllHGl~---G~s~~--~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~ 227 (568)
..|+||++||.+ +.... .++..+...+ + ...++++|+.-...-+. +..| .....++.+..+++.+..+..
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~~~~~--~~~y-PtQL~qlv~~Y~~Lv~~~G~~ 195 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTSSDEH--GHKY-PTQLRQLVATYDYLVESEGNK 195 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEeccccccccC--CCcC-chHHHHHHHHHHHHHhccCCC
Confidence 459999999942 11111 1222233333 3 45899999976431000 1111 234578888889998666778
Q ss_pred cEEEEEecHHHHHHHHHHHhcCC---CCCceEEEEEcCCCChh
Q 008371 228 PLYAVGTSIGANILVKYLGENGV---NTPLVGAAAICSPWDLL 267 (568)
Q Consensus 228 ~i~lvG~SmGG~ial~ya~~~~~---~~~I~a~V~is~p~d~~ 267 (568)
+|+++|=|.||++++.++..-.. ...-+++|+|+|-.++.
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 99999999999999876644322 12357999998765553
No 176
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.91 E-value=0.0027 Score=70.65 Aligned_cols=102 Identities=19% Similarity=0.236 Sum_probs=62.5
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHh----------------CCceEEEEcCCC-----CCCCCCCCCCCCCCCcHHH
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAG----------------HGWNVVVSNHRG-----LGGISLTSDCFYNGGWTED 212 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~----------------~Gy~Vvv~D~RG-----~G~S~~~~~~~~~~~~~~D 212 (568)
+-+|+|+||..|+-.. +|.++..... ..|+-++.|.-+ ||++- ...++-
T Consensus 89 GIPVLFIPGNAGSyKQ--vRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l--------~dQtEY 158 (973)
T KOG3724|consen 89 GIPVLFIPGNAGSYKQ--VRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHIL--------LDQTEY 158 (973)
T ss_pred CceEEEecCCCCchHH--HHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhH--------HHHHHH
Confidence 3458999999885443 4666665542 135555555543 22111 123456
Q ss_pred HHHHHHHHHHHCCC---------CcEEEEEecHHHHHHHHHHHhcCC-CCCceEEEEEcCCCC
Q 008371 213 LRRVIDYLHCQYPE---------VPLYAVGTSIGANILVKYLGENGV-NTPLVGAAAICSPWD 265 (568)
Q Consensus 213 l~~vi~~l~~~~~~---------~~i~lvG~SmGG~ial~ya~~~~~-~~~I~a~V~is~p~d 265 (568)
+.++|.+|.+.|.+ ..+++|||||||.+|...+..... +..|.-++..++|..
T Consensus 159 V~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 159 VNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred HHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 77777777766532 239999999999999876654322 114667777776553
No 177
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=96.57 E-value=0.038 Score=58.27 Aligned_cols=108 Identities=21% Similarity=0.235 Sum_probs=71.8
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEE--EEcCCCCCCCCCCCCC-------------------C----C
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVV--VSNHRGLGGISLTSDC-------------------F----Y 205 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vv--v~D~RG~G~S~~~~~~-------------------~----~ 205 (568)
.+.+.+|++++|++|+....|...+.+.++++ |+|+ .+|+-|.|..+..++. . .
T Consensus 32 Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~-fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~~iLk~~L~~i~i~~~~i 110 (403)
T PF11144_consen 32 KEIKAIVFIIPGFGADANSNYLDFMREYIAKK-FNVVVISVNYHCFCNRPQYGAKFYFDDIDKEILKKSLEKINIDSESI 110 (403)
T ss_pred CCceEEEEEeCCcCCCcchHHHHHHHHHHHHh-CCEEEEEeeeeheeeccccCchhcCCHHHHHHHHHHHHHcCcccccc
Confidence 45678999999999988888878788888764 5554 5566665533221110 0 0
Q ss_pred ----------------------------------------------CCC--cHHHHHHHHHHHHHHCC----CCcEEEEE
Q 008371 206 ----------------------------------------------NGG--WTEDLRRVIDYLHCQYP----EVPLYAVG 233 (568)
Q Consensus 206 ----------------------------------------------~~~--~~~Dl~~vi~~l~~~~~----~~~i~lvG 233 (568)
+.| .+-|+..++.++.+.++ +-|++++|
T Consensus 111 ~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l~k~~~~~~~~lp~I~~G 190 (403)
T PF11144_consen 111 NTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDLKKIFPKNGGGLPKIYIG 190 (403)
T ss_pred ccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHHHHhhhcccCCCcEEEEe
Confidence 000 01366666777777664 24899999
Q ss_pred ecHHHHHHHHHHHhcCCCCCceEEEEEc
Q 008371 234 TSIGANILVKYLGENGVNTPLVGAAAIC 261 (568)
Q Consensus 234 ~SmGG~ial~ya~~~~~~~~I~a~V~is 261 (568)
+|.||.++...+.-.|- .+++++=-+
T Consensus 191 ~s~G~yla~l~~k~aP~--~~~~~iDns 216 (403)
T PF11144_consen 191 SSHGGYLAHLCAKIAPW--LFDGVIDNS 216 (403)
T ss_pred cCcHHHHHHHHHhhCcc--ceeEEEecC
Confidence 99999999988877776 566666433
No 178
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.52 E-value=0.0067 Score=55.70 Aligned_cols=56 Identities=16% Similarity=0.097 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCC--CCceEEEEEcCCCCh
Q 008371 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVN--TPLVGAAAICSPWDL 266 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~--~~I~a~V~is~p~d~ 266 (568)
.++...++....++|..+++++||||||.+|..++...... ..+..++..++|...
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~ 69 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVG 69 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCccc
Confidence 45666666666668889999999999999999877766542 246678888776543
No 179
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.34 E-value=0.033 Score=56.70 Aligned_cols=106 Identities=11% Similarity=0.073 Sum_probs=66.5
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHhC-CceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH--CCCCcE
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGH-GWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ--YPEVPL 229 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~--~~~~~i 229 (568)
..| +|+.||++.+....-+..+.+.+.+. |.-+.++-. |.+. ...+.....+.+..+.+.++.. .. .-+
T Consensus 25 ~~P-~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~---~~s~~~~~~~Qve~vce~l~~~~~l~-~G~ 96 (314)
T PLN02633 25 SVP-FIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGV---GDSWLMPLTQQAEIACEKVKQMKELS-QGY 96 (314)
T ss_pred CCC-eEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCc---cccceeCHHHHHHHHHHHHhhchhhh-CcE
Confidence 445 78889995433333456666666442 555554432 3321 1122233345666666666542 12 249
Q ss_pred EEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 230 YAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 230 ~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
.++|||.||.++=.++.+.+...+|+..|++++|-..
T Consensus 97 naIGfSQGGlflRa~ierc~~~p~V~nlISlggph~G 133 (314)
T PLN02633 97 NIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAG 133 (314)
T ss_pred EEEEEccchHHHHHHHHHCCCCCCcceEEEecCCCCC
Confidence 9999999999999999998763479999999986543
No 180
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=96.21 E-value=0.11 Score=52.04 Aligned_cols=256 Identities=13% Similarity=0.205 Sum_probs=132.2
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEE
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAV 232 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lv 232 (568)
..|.|+++--+.| .....++..++.|.. -..|++-|+-..--.+.....+...++.+-+.++++++ .| .++++
T Consensus 102 pdPkvLivapmsG-H~aTLLR~TV~alLp-~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~---Gp--~~hv~ 174 (415)
T COG4553 102 PDPKVLIVAPMSG-HYATLLRGTVEALLP-YHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFL---GP--DAHVM 174 (415)
T ss_pred CCCeEEEEecccc-cHHHHHHHHHHHhcc-ccceeEeeccccceeecccCCccHHHHHHHHHHHHHHh---CC--CCcEE
Confidence 3568888888876 455777889998876 36899999887665555444433233334444444444 23 35555
Q ss_pred EecHHHHHH---HHHHHhcCCCCCceEEEEEcCCCChhhhhHHHhH-------HHH----------------HHHHHH--
Q 008371 233 GTSIGANIL---VKYLGENGVNTPLVGAAAICSPWDLLICDRFINR-------RLV----------------QKCYDR-- 284 (568)
Q Consensus 233 G~SmGG~ia---l~ya~~~~~~~~I~a~V~is~p~d~~~~~~~~~~-------~~~----------------~~~~~~-- 284 (568)
+.+.-+.-+ ..++++.++...-..++++++|.|.-........ .|+ +++|..
T Consensus 175 aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR~nPTavN~lA~~k~~~WF~~n~vm~vP~~ypg~gR~VYPGFl 254 (415)
T COG4553 175 AVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDARKNPTAVNELATEKSIEWFRDNVVMQVPPPYPGFGRRVYPGFL 254 (415)
T ss_pred EEecCCchHHHHHHHHHhcCCCCCCceeeeecCccccccCcHHHhHhhhccchHHHHhCeeeecCCCCCCccccccccHH
Confidence 555443322 2334444443356788999999886543211110 000 112222
Q ss_pred ----HHHHHhHhhHHhhhhhhhccCChhhhhccCCHHHHHHhhhcccC-----CCCCHHHHHHhCCcc--c--------c
Q 008371 285 ----VIAIGLRGFAQLHQSTVARLADWEGITKSRSIRDFDNHATRVLG-----KFETVDAYYRHSSSA--N--------F 345 (568)
Q Consensus 285 ----~l~~~l~~~~~~~~~~~~~~~d~~~i~~~~~l~~fd~~~~~~~~-----g~~~~~~yy~~~s~~--~--------~ 345 (568)
.+..++.+.+..|...+..+..-+.- ++..-.+|-+.+..... -..++++-+.+.... + .
T Consensus 255 QlagFmsmNldrH~~aH~~~~~~Lv~~D~~-~Ae~h~~FYdEYlavmdl~aEfYLqTid~VFqq~~LpkG~~vhrg~~vd 333 (415)
T COG4553 255 QLAGFMSMNLDRHIDAHKDFFLSLVKNDGD-SAEKHREFYDEYLAVMDLTAEFYLQTIDEVFQQHALPKGEMVHRGKPVD 333 (415)
T ss_pred HhhhHhhcChhhhHHHHHHHHHHHHcccch-hHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhcccCCceeecCCcCC
Confidence 12233444444444443322111110 11112233222221111 011222222222211 0 1
Q ss_pred cCCC-ccceEEEEeCCCCCCCCCCcc--hHHHhcCCC--EEEEEeCCCCccccccccccCcccHHHHHHHHHHHhhc
Q 008371 346 VRNV-SVPLLCISTLDDPVCTREAIP--WDECRANEK--IILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNT 417 (568)
Q Consensus 346 l~~I-~vPvLiI~G~dDpivp~~~~~--~~~~~~~~~--~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~ 417 (568)
...| ++-++-|-|+.|.|....... ..+|...|. .+..+-++.||.|.|.|.. -+.+....|.+|+...-.
T Consensus 334 p~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsr-fr~eIvPri~dFI~~~d~ 409 (415)
T COG4553 334 PTAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSR-FREEIVPRIRDFIRRYDR 409 (415)
T ss_pred hhheeceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccch-HHHHHHHHHHHHHHHhCc
Confidence 1233 577899999999998765332 234544442 4456678899999998732 234667788999887543
No 181
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.15 E-value=0.0063 Score=66.70 Aligned_cols=92 Identities=13% Similarity=0.005 Sum_probs=62.7
Q ss_pred HHHHHHHHhCCceEEEEcCCCCCCCCCCCCC--CCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcC-
Q 008371 173 KHLAFKMAGHGWNVVVSNHRGLGGISLTSDC--FYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENG- 249 (568)
Q Consensus 173 ~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~--~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~- 249 (568)
..+++.|.+.||. --|++|...-=..+.. ....++...++..|+.+.....+.+++++||||||.+++.++....
T Consensus 159 ~kLIe~L~~iGY~--~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~ 236 (642)
T PLN02517 159 AVLIANLARIGYE--EKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEA 236 (642)
T ss_pred HHHHHHHHHcCCC--CCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccc
Confidence 6899999999986 3444443210000000 0113455789999998888776789999999999999998886321
Q ss_pred ---------C---CCCceEEEEEcCCCCh
Q 008371 250 ---------V---NTPLVGAAAICSPWDL 266 (568)
Q Consensus 250 ---------~---~~~I~a~V~is~p~d~ 266 (568)
. +..|++.|.|++|+..
T Consensus 237 ~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 237 PAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred cccccCCcchHHHHHHHHHheecccccCC
Confidence 0 1248999999998754
No 182
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.10 E-value=0.014 Score=52.48 Aligned_cols=56 Identities=14% Similarity=0.232 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCC---C-CCceEEEEEcCCCC
Q 008371 210 TEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGV---N-TPLVGAAAICSPWD 265 (568)
Q Consensus 210 ~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~---~-~~I~a~V~is~p~d 265 (568)
.+.+.+.++.+.++++..++++.|||+||.+|..++..... . .....++..++|.-
T Consensus 47 ~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 47 YDQILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 35666677777778888899999999999999876654321 1 12344455555543
No 183
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.06 E-value=0.0078 Score=51.64 Aligned_cols=61 Identities=23% Similarity=0.213 Sum_probs=48.7
Q ss_pred CccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHH
Q 008371 349 VSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (568)
Q Consensus 349 I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~ 414 (568)
-..|+|+|+++.||+.|.+.... ..+..++..+++.++.||..+..+ . .=..+.+.+||..
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~-~~~~l~~s~lvt~~g~gHg~~~~~---s-~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARA-MAARLPGSRLVTVDGAGHGVYAGG---S-PCVDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHH-HHHHCCCceEEEEeccCcceecCC---C-hHHHHHHHHHHHc
Confidence 35999999999999999887665 566778899999999999887531 2 2356888899874
No 184
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.02 E-value=0.049 Score=53.99 Aligned_cols=105 Identities=16% Similarity=0.092 Sum_probs=67.3
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhC-CceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCC-CCcEEE
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGH-GWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYP-EVPLYA 231 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~-~~~i~l 231 (568)
.| +|++||++.+..+.-+.++.+.+.+. |..|++++. |-| . ...+.....+.+..+.+.++..-. ..-+.+
T Consensus 24 ~P-~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g-~----~~s~l~pl~~Qv~~~ce~v~~m~~lsqGyni 96 (296)
T KOG2541|consen 24 VP-VIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDG-I----KDSSLMPLWEQVDVACEKVKQMPELSQGYNI 96 (296)
T ss_pred CC-EEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCC-c----chhhhccHHHHHHHHHHHHhcchhccCceEE
Confidence 45 78889996544433346677777664 778888874 433 1 111112234566666666653211 234899
Q ss_pred EEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 232 VGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 232 vG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
+|+|.||.++-.++..-+. .+|+..|++++|--.
T Consensus 97 vg~SQGglv~Raliq~cd~-ppV~n~ISL~gPhaG 130 (296)
T KOG2541|consen 97 VGYSQGGLVARALIQFCDN-PPVKNFISLGGPHAG 130 (296)
T ss_pred EEEccccHHHHHHHHhCCC-CCcceeEeccCCcCC
Confidence 9999999998766666554 689999999987543
No 185
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=95.97 E-value=0.02 Score=44.38 Aligned_cols=50 Identities=22% Similarity=0.254 Sum_probs=28.3
Q ss_pred CCCceEEEEEcCCCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchh
Q 008371 111 DISYKRHLFQTPDGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAA 169 (568)
Q Consensus 111 ~~~y~r~~~~~~DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~ 169 (568)
..+.+...++++||-.|.+....++.. ..+....+|+|++.||+.++|..
T Consensus 9 GY~~E~h~V~T~DGYiL~l~RIp~~~~---------~~~~~~~k~pVll~HGL~~ss~~ 58 (63)
T PF04083_consen 9 GYPCEEHEVTTEDGYILTLHRIPPGKN---------SSNQNKKKPPVLLQHGLLQSSDD 58 (63)
T ss_dssp T---EEEEEE-TTSEEEEEEEE-SBTT---------CTTTTTT--EEEEE--TT--GGG
T ss_pred CCCcEEEEEEeCCCcEEEEEEccCCCC---------CcccCCCCCcEEEECCcccChHH
Confidence 356689999999999999976654331 12235678999999999876654
No 186
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=95.85 E-value=0.1 Score=55.80 Aligned_cols=136 Identities=16% Similarity=0.152 Sum_probs=77.4
Q ss_pred EEEEcC--CCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHH----HH----------
Q 008371 117 HLFQTP--DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFK----MA---------- 180 (568)
Q Consensus 117 ~~~~~~--DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~----l~---------- 180 (568)
-++... .+..+.+..++... ...++|+||.+.|.+|+|...- .+.+. +.
T Consensus 14 Gyl~~~~~~~~~lfyw~~~s~~-------------~~~~~Pl~~wlnGGPG~SS~~g--~f~e~GP~~~~~~~~~~l~~n 78 (415)
T PF00450_consen 14 GYLPVNDNENAHLFYWFFESRN-------------DPEDDPLILWLNGGPGCSSMWG--LFGENGPFRINPDGPYTLEDN 78 (415)
T ss_dssp EEEEECTTTTEEEEEEEEE-SS-------------GGCSS-EEEEEE-TTTB-THHH--HHCTTSSEEEETTSTSEEEE-
T ss_pred EEEecCCCCCcEEEEEEEEeCC-------------CCCCccEEEEecCCceeccccc--cccccCceEEeeccccccccc
Confidence 356666 56777775554322 2467899999999999775321 11110 00
Q ss_pred ----hCCceEEEEcCC-CCCCCCCCCCCCCCCCc---HHHHHHHHHHHHHHCC---CCcEEEEEecHHHHHHHHHHHh--
Q 008371 181 ----GHGWNVVVSNHR-GLGGISLTSDCFYNGGW---TEDLRRVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGE-- 247 (568)
Q Consensus 181 ----~~Gy~Vvv~D~R-G~G~S~~~~~~~~~~~~---~~Dl~~vi~~l~~~~~---~~~i~lvG~SmGG~ial~ya~~-- 247 (568)
.+-.+++-+|.| |.|-|....+..+..+. .+|+.+++...-.++| ..++++.|-|+||.-+-.++.+
T Consensus 79 ~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 79 PYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred ccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 112578999955 89988765444322222 3566666665556665 4589999999999876544432
Q ss_pred -cCC-----CCCceEEEEEcCCCChh
Q 008371 248 -NGV-----NTPLVGAAAICSPWDLL 267 (568)
Q Consensus 248 -~~~-----~~~I~a~V~is~p~d~~ 267 (568)
... ...++|+++.++-.+..
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPR 184 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHH
T ss_pred hccccccccccccccceecCcccccc
Confidence 221 24688988776655553
No 187
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=95.77 E-value=0.054 Score=54.73 Aligned_cols=108 Identities=12% Similarity=0.105 Sum_probs=63.4
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCC----ceEEEEcCCCCCCCCCCCCCCCCC-CcHHH-HHHHHHHHHHHC
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHG----WNVVVSNHRGLGGISLTSDCFYNG-GWTED-LRRVIDYLHCQY 224 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~G----y~Vvv~D~RG~G~S~~~~~~~~~~-~~~~D-l~~vi~~l~~~~ 224 (568)
..+.|++++.||-.- -...-+....+.+...| -.++.+|+- ........+++. ...+. ..+++=++.++|
T Consensus 95 ~~k~pvl~~~DG~~~-~~~g~i~~~~dsli~~g~i~pai~vgid~~---d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~y 170 (299)
T COG2382 95 LEKYPVLYLQDGQDW-FRSGRIPRILDSLIAAGEIPPAILVGIDYI---DVKKRREELHCNEAYWRFLAQELLPYVEERY 170 (299)
T ss_pred cccccEEEEeccHHH-HhcCChHHHHHHHHHcCCCCCceEEecCCC---CHHHHHHHhcccHHHHHHHHHHhhhhhhccC
Confidence 467899999998420 01111123555555554 334444432 221111222221 12222 355666788888
Q ss_pred CCC----cEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCC
Q 008371 225 PEV----PLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (568)
Q Consensus 225 ~~~----~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~ 264 (568)
|.. .-+++|.|+||.+++..+..+|+ .+-.+++-|+.+
T Consensus 171 p~~~~a~~r~L~G~SlGG~vsL~agl~~Pe--~FG~V~s~Sps~ 212 (299)
T COG2382 171 PTSADADGRVLAGDSLGGLVSLYAGLRHPE--RFGHVLSQSGSF 212 (299)
T ss_pred cccccCCCcEEeccccccHHHHHHHhcCch--hhceeeccCCcc
Confidence 632 35899999999999999999998 677777666544
No 188
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=95.73 E-value=0.14 Score=53.91 Aligned_cols=154 Identities=9% Similarity=0.075 Sum_probs=93.8
Q ss_pred CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCC-ChhhhhHHHhHHHHHHHHHHHHHHHhHhhHHhhhhhhhc
Q 008371 225 PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW-DLLICDRFINRRLVQKCYDRVIAIGLRGFAQLHQSTVAR 303 (568)
Q Consensus 225 ~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~-d~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 303 (568)
.-.++++.|.|==|..++..++..+ ||++++-+.-.. ++.. .+... .+.|.......+..|..
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D~---RV~aivP~Vid~LN~~~---~l~h~--y~~yG~~ws~a~~dY~~-------- 233 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVDP---RVKAIVPIVIDVLNMKA---NLEHQ--YRSYGGNWSFAFQDYYN-------- 233 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccCc---ceeEEeeEEEccCCcHH---HHHHH--HHHhCCCCccchhhhhH--------
Confidence 3568999999999999998777443 699988776433 2221 11110 00000000001111110
Q ss_pred cCChhhhhccCCHHHHHHhhhcccCCCCCHHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEE
Q 008371 304 LADWEGITKSRSIRDFDNHATRVLGKFETVDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILA 383 (568)
Q Consensus 304 ~~d~~~i~~~~~l~~fd~~~~~~~~g~~~~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~ 383 (568)
+.++.. .+-.......+..++..+.+++++|-++|+|..|++..++.......+......+.
T Consensus 234 -----------------~gi~~~-l~tp~f~~L~~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr 295 (367)
T PF10142_consen 234 -----------------EGITQQ-LDTPEFDKLMQIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLR 295 (367)
T ss_pred -----------------hCchhh-cCCHHHHHHHHhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEE
Confidence 000000 01112233344556667778899999999999999999887766555555678999
Q ss_pred EeCCCCccccccccccCcccHHHHHHHHHHHhhcCC
Q 008371 384 TTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTSP 419 (568)
Q Consensus 384 ~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~~~ 419 (568)
.+|+.+|.+-. .-..+.+..|+..+....
T Consensus 296 ~vPN~~H~~~~-------~~~~~~l~~f~~~~~~~~ 324 (367)
T PF10142_consen 296 YVPNAGHSLIG-------SDVVQSLRAFYNRIQNGR 324 (367)
T ss_pred eCCCCCcccch-------HHHHHHHHHHHHHHHcCC
Confidence 99999997533 236688999999886543
No 189
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=95.71 E-value=0.12 Score=48.91 Aligned_cols=52 Identities=25% Similarity=0.349 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHC-CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCC
Q 008371 211 EDLRRVIDYLHCQY-PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~-~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~ 264 (568)
.++..+++-|+... +..++.++|||+|+.++-..+...+. .++.+|++++|-
T Consensus 92 ~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~--~vddvv~~GSPG 144 (177)
T PF06259_consen 92 PRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGL--RVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCC--CcccEEEECCCC
Confidence 58888888888777 77789999999999999887777444 799999998875
No 190
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.69 E-value=0.02 Score=56.29 Aligned_cols=53 Identities=13% Similarity=0.213 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCC---CCCceEEEEEcCCC
Q 008371 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGV---NTPLVGAAAICSPW 264 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~---~~~I~a~V~is~p~ 264 (568)
+++...+..+.+++|..++++.||||||.+|..++..... ...+. ++..++|-
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~-~~tFg~P~ 167 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVT-VYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceE-EEEeCCCC
Confidence 4556666666777888899999999999999876665331 11344 55555554
No 191
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.67 E-value=0.0058 Score=64.93 Aligned_cols=91 Identities=14% Similarity=0.162 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHhCCce------EEEEcCCC-CCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHH
Q 008371 170 AYIKHLAFKMAGHGWN------VVVSNHRG-LGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILV 242 (568)
Q Consensus 170 ~y~~~l~~~l~~~Gy~------Vvv~D~RG-~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial 242 (568)
+|+..+++.+..-||. -+.+|+|= +-.+. + .......++..++...+.++++|+++|||||||.+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e----~--rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~l 197 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSE----E--RDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVL 197 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChh----H--HHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHH
Confidence 5678899999888886 45677773 11111 1 1223478889999998888889999999999999999
Q ss_pred HHHHhcCCC------CCceEEEEEcCCCCh
Q 008371 243 KYLGENGVN------TPLVGAAAICSPWDL 266 (568)
Q Consensus 243 ~ya~~~~~~------~~I~a~V~is~p~d~ 266 (568)
.++...+.. .-|++.+.+++||..
T Consensus 198 yFl~w~~~~~~~W~~k~I~sfvnig~p~lG 227 (473)
T KOG2369|consen 198 YFLKWVEAEGPAWCDKYIKSFVNIGAPWLG 227 (473)
T ss_pred HHHhcccccchhHHHHHHHHHHccCchhcC
Confidence 999888762 137777777777644
No 192
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.66 E-value=0.13 Score=54.07 Aligned_cols=107 Identities=18% Similarity=0.239 Sum_probs=73.6
Q ss_pred CcEEEEeCCCCCCchhHHHH--HHHHHH-HhCCceEEEEcCCCCCCCCCCCCCCC----------CCCcHHHHHHHHHHH
Q 008371 154 NPIVVVIPGLTSDSAAAYIK--HLAFKM-AGHGWNVVVSNHRGLGGISLTSDCFY----------NGGWTEDLRRVIDYL 220 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~--~l~~~l-~~~Gy~Vvv~D~RG~G~S~~~~~~~~----------~~~~~~Dl~~vi~~l 220 (568)
.| |++--|..|+-. ++.. .++..+ .+.+--+|-..+|=+|.|-.--...+ ......|..+++.++
T Consensus 81 gP-IffYtGNEGdie-~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~l 158 (492)
T KOG2183|consen 81 GP-IFFYTGNEGDIE-WFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFL 158 (492)
T ss_pred Cc-eEEEeCCcccHH-HHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHH
Confidence 55 677788877533 3322 122222 23355789999999998853222211 122337999999999
Q ss_pred HHHCC--CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCC
Q 008371 221 HCQYP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (568)
Q Consensus 221 ~~~~~--~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~ 264 (568)
+.... ..|++++|-|+|||++..+=.++|. -+.|+.+-++|.
T Consensus 159 K~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH--iv~GAlAaSAPv 202 (492)
T KOG2183|consen 159 KRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH--IVLGALAASAPV 202 (492)
T ss_pred hhccccccCcEEEecCchhhHHHHHHHhcChh--hhhhhhhccCce
Confidence 88753 5689999999999999998889998 677888777665
No 193
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.62 E-value=0.069 Score=52.69 Aligned_cols=98 Identities=19% Similarity=0.266 Sum_probs=59.8
Q ss_pred CCcEEEEeCCC-CCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcH----HHHHHHHHHHHHHCC--
Q 008371 153 KNPIVVVIPGL-TSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWT----EDLRRVIDYLHCQYP-- 225 (568)
Q Consensus 153 ~~PvVVllHGl-~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~----~Dl~~vi~~l~~~~~-- 225 (568)
++.+|=|+-|. -|..-...++.+.+.|+++||.|++.=+.- .+-+...+ +....+++.+..+..
T Consensus 16 P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~---------tfDH~~~A~~~~~~f~~~~~~L~~~~~~~ 86 (250)
T PF07082_consen 16 PKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV---------TFDHQAIAREVWERFERCLRALQKRGGLD 86 (250)
T ss_pred CCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC---------CCcHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 45566677662 233334444899999999999999986532 01111111 344555555555432
Q ss_pred --CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEc
Q 008371 226 --EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAIC 261 (568)
Q Consensus 226 --~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is 261 (568)
.-|++-+|||||+-+-+.....+.. .-++-++++
T Consensus 87 ~~~lP~~~vGHSlGcklhlLi~s~~~~--~r~gniliS 122 (250)
T PF07082_consen 87 PAYLPVYGVGHSLGCKLHLLIGSLFDV--ERAGNILIS 122 (250)
T ss_pred cccCCeeeeecccchHHHHHHhhhccC--cccceEEEe
Confidence 2478999999999987766555544 235556654
No 194
>COG0627 Predicted esterase [General function prediction only]
Probab=95.40 E-value=0.042 Score=56.80 Aligned_cols=115 Identities=18% Similarity=0.266 Sum_probs=67.3
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHH-HHHHHHhCCceEEEEcC--CCCC------------CC---CCCCCC-CCC-CCcH
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKH-LAFKMAGHGWNVVVSNH--RGLG------------GI---SLTSDC-FYN-GGWT 210 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~-l~~~l~~~Gy~Vvv~D~--RG~G------------~S---~~~~~~-~~~-~~~~ 210 (568)
+.+-|+++++||.++.....|.+. +-......|+.+++.|- |+.+ .+ +...+. ... ..|.
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 456799999999987543444433 33444556888888632 2222 11 001000 000 1111
Q ss_pred H-HHHHHHHHHHHHCCC----CcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChh
Q 008371 211 E-DLRRVIDYLHCQYPE----VPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (568)
Q Consensus 211 ~-Dl~~vi~~l~~~~~~----~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~ 267 (568)
. =..++-..+.+.++. ..-.++||||||.-|+++|..+|+ +++.+.+.++..+..
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd--~f~~~sS~Sg~~~~s 190 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD--RFKSASSFSGILSPS 190 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc--hhceecccccccccc
Confidence 1 112222233444441 268999999999999999999987 788888888765543
No 195
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.27 E-value=0.66 Score=46.35 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=33.7
Q ss_pred HHHHHCC--CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCC
Q 008371 219 YLHCQYP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (568)
Q Consensus 219 ~l~~~~~--~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p 263 (568)
++..+|. .++-.++||||||.+++..+..+|+ .+...++++|.
T Consensus 127 ~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~--~F~~y~~~SPS 171 (264)
T COG2819 127 FIEARYRTNSERTAIIGHSLGGLFVLFALLTYPD--CFGRYGLISPS 171 (264)
T ss_pred HHhcccccCcccceeeeecchhHHHHHHHhcCcc--hhceeeeecch
Confidence 3444443 3468999999999999999999988 78888887663
No 196
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.20 E-value=0.032 Score=52.93 Aligned_cols=55 Identities=20% Similarity=0.342 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCC----CCCceEEEEEcCCCC
Q 008371 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGV----NTPLVGAAAICSPWD 265 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~----~~~I~a~V~is~p~d 265 (568)
.++...++....+.|+.+++++|+|.||.++...+...+. ..+|.++++++.|..
T Consensus 65 ~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 65 ANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 6777777777788999999999999999999999887211 126999999987764
No 197
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.07 E-value=0.051 Score=53.42 Aligned_cols=54 Identities=15% Similarity=0.179 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCC--CCCceEEEEEcCCCC
Q 008371 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGV--NTPLVGAAAICSPWD 265 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~--~~~I~a~V~is~p~d 265 (568)
....+.++.+.+.++. ++.+.|||+||++|...+....+ ..+|..++..++|--
T Consensus 69 ~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 69 KSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred HHHHHHHHHHHHhCCC-CEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 3445555556666665 59999999999999987776432 237999998887753
No 198
>COG3150 Predicted esterase [General function prediction only]
Probab=94.73 E-value=0.2 Score=46.26 Aligned_cols=49 Identities=10% Similarity=0.030 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCC
Q 008371 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~ 264 (568)
.++.+-++.+..........++|-|+||+.+.......+ +++++ ++|..
T Consensus 43 ~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G----irav~-~NPav 91 (191)
T COG3150 43 QQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG----IRAVV-FNPAV 91 (191)
T ss_pred HHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC----Chhhh-cCCCc
Confidence 455555555555555556899999999999998888875 44444 55543
No 199
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=94.46 E-value=0.069 Score=51.55 Aligned_cols=90 Identities=24% Similarity=0.204 Sum_probs=56.5
Q ss_pred HHHHHHHhCCceEEEEcCCCCCCCCCC-C----CCCCCCCcHHHHHHHHHHHHHHC-CCCcEEEEEecHHHHHHHHHHHh
Q 008371 174 HLAFKMAGHGWNVVVSNHRGLGGISLT-S----DCFYNGGWTEDLRRVIDYLHCQY-PEVPLYAVGTSIGANILVKYLGE 247 (568)
Q Consensus 174 ~l~~~l~~~Gy~Vvv~D~RG~G~S~~~-~----~~~~~~~~~~Dl~~vi~~l~~~~-~~~~i~lvG~SmGG~ial~ya~~ 247 (568)
..+..+.. -.+|+++=||=....... . .......-..|+.++.++..+++ .++|++++|||.|++++.+++.+
T Consensus 37 ~qas~F~~-~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 37 NQASAFNG-VCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HHhhhhhc-CCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHH
Confidence 33444433 368999998863322211 1 11111122379999998777666 46699999999999999999987
Q ss_pred cCC----CCCceEEEEEcCCC
Q 008371 248 NGV----NTPLVGAAAICSPW 264 (568)
Q Consensus 248 ~~~----~~~I~a~V~is~p~ 264 (568)
+=. ..++.++-+|+.+.
T Consensus 116 ~~~~~pl~~rLVAAYliG~~v 136 (207)
T PF11288_consen 116 EIAGDPLRKRLVAAYLIGYPV 136 (207)
T ss_pred HhcCchHHhhhheeeecCccc
Confidence 622 12566666665543
No 200
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=94.30 E-value=0.14 Score=53.63 Aligned_cols=85 Identities=20% Similarity=0.171 Sum_probs=63.3
Q ss_pred EEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEec
Q 008371 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTS 235 (568)
Q Consensus 156 vVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~S 235 (568)
.-||.-|=+| ....-+...++|+++|+.|+-+|-.-+=-++.++ ....+|+..++++-..+.+..++.++|+|
T Consensus 262 ~av~~SGDGG--Wr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtP-----e~~a~Dl~r~i~~y~~~w~~~~~~liGyS 334 (456)
T COG3946 262 VAVFYSGDGG--WRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTP-----EQIAADLSRLIRFYARRWGAKRVLLIGYS 334 (456)
T ss_pred EEEEEecCCc--hhhhhHHHHHHHHHCCCceeeeehhhhhhccCCH-----HHHHHHHHHHHHHHHHhhCcceEEEEeec
Confidence 4466677544 2234478999999999999999966544444332 23558999999999998888899999999
Q ss_pred HHHHHHHHHHHh
Q 008371 236 IGANILVKYLGE 247 (568)
Q Consensus 236 mGG~ial~ya~~ 247 (568)
+|+-+.-.....
T Consensus 335 fGADvlP~~~n~ 346 (456)
T COG3946 335 FGADVLPFAYNR 346 (456)
T ss_pred ccchhhHHHHHh
Confidence 999886543333
No 201
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.26 E-value=0.49 Score=51.26 Aligned_cols=113 Identities=17% Similarity=0.114 Sum_probs=65.7
Q ss_pred CCCCcEEEEeCCCCCCchhHH-HHHHHH-------------HHH------hCCceEEEEc-CCCCCCCCCCCCCCCCCC-
Q 008371 151 CEKNPIVVVIPGLTSDSAAAY-IKHLAF-------------KMA------GHGWNVVVSN-HRGLGGISLTSDCFYNGG- 208 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y-~~~l~~-------------~l~------~~Gy~Vvv~D-~RG~G~S~~~~~~~~~~~- 208 (568)
....|+|+.+-|.+|+|...- +..... .+. .+-.+++-+| .-|.|-|....+..+...
T Consensus 63 ~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~ 142 (433)
T PLN03016 63 PKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDI 142 (433)
T ss_pred cccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCH
Confidence 356799999999998775211 011111 110 0125788889 568888854333222211
Q ss_pred -cHHHHHHHHHHHHHHCC---CCcEEEEEecHHHHHHHHHHHhc---C-----CCCCceEEEEEcCC
Q 008371 209 -WTEDLRRVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGEN---G-----VNTPLVGAAAICSP 263 (568)
Q Consensus 209 -~~~Dl~~vi~~l~~~~~---~~~i~lvG~SmGG~ial~ya~~~---~-----~~~~I~a~V~is~p 263 (568)
..+|+.+++...-+++| ..++++.|.|+||..+-.++.+- . ....++|+++-++.
T Consensus 143 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~ 209 (433)
T PLN03016 143 SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPV 209 (433)
T ss_pred HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCC
Confidence 12456555555545555 46899999999998766554431 1 11257787766553
No 202
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=94.24 E-value=0.21 Score=53.70 Aligned_cols=112 Identities=18% Similarity=0.161 Sum_probs=80.1
Q ss_pred CCCcEEEEeCCCCCCchhHHHH----HHHHHHHhCCceEEEEcCCCCCCCCCCCCCCC-------CCCcHHHHHHHHHHH
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIK----HLAFKMAGHGWNVVVSNHRGLGGISLTSDCFY-------NGGWTEDLRRVIDYL 220 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~----~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~-------~~~~~~Dl~~vi~~l 220 (568)
++.|+.+++-|= |.-...|+. .....+.+.|-.|+.+.||=+|.|....+... ......|+.++|+.+
T Consensus 84 ~~gPiFLmIGGE-gp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 84 PGGPIFLMIGGE-GPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCCceEEEEcCC-CCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 456777777763 221211211 34555666788999999999998854322211 122347999999999
Q ss_pred HHHCC---CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 221 HCQYP---EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 221 ~~~~~---~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
..+++ ..|.+.+|-|+-|.++.-+=..+|+ .+.|+|+-++|...
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe--l~~GsvASSapv~A 209 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE--LTVGSVASSAPVLA 209 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCch--hheeecccccceeE
Confidence 98874 2389999999999999988899999 89999988887644
No 203
>PLN02454 triacylglycerol lipase
Probab=94.22 E-value=0.099 Score=55.57 Aligned_cols=38 Identities=21% Similarity=0.225 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHCCCCc--EEEEEecHHHHHHHHHHHh
Q 008371 210 TEDLRRVIDYLHCQYPEVP--LYAVGTSIGANILVKYLGE 247 (568)
Q Consensus 210 ~~Dl~~vi~~l~~~~~~~~--i~lvG~SmGG~ial~ya~~ 247 (568)
.+++...|+.+.++|+..+ |++.||||||.+|+..|..
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 3577778888888888765 9999999999999987744
No 204
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=94.16 E-value=0.11 Score=52.51 Aligned_cols=106 Identities=21% Similarity=0.215 Sum_probs=48.7
Q ss_pred CCcEEEEeCCCCCCch----hHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcH-HHHHHHHHHHHHHCC--
Q 008371 153 KNPIVVVIPGLTSDSA----AAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWT-EDLRRVIDYLHCQYP-- 225 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~----~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~-~Dl~~vi~~l~~~~~-- 225 (568)
.+| ||+.||++.+.. ..-+..+++... -|--|..++. |-+.++-. ...+ .+.. +.+..+.+.++. -|
T Consensus 5 ~~P-vViwHGmGD~~~~~~~m~~i~~~i~~~~-PG~yV~si~i-g~~~~~D~-~~s~-f~~v~~Qv~~vc~~l~~-~p~L 78 (279)
T PF02089_consen 5 PLP-VVIWHGMGDSCCNPSSMGSIKELIEEQH-PGTYVHSIEI-GNDPSEDV-ENSF-FGNVNDQVEQVCEQLAN-DPEL 78 (279)
T ss_dssp S---EEEE--TT--S--TTTHHHHHHHHHHHS-TT--EEE--S-SSSHHHHH-HHHH-HSHHHHHHHHHHHHHHH--GGG
T ss_pred CCc-EEEEEcCccccCChhHHHHHHHHHHHhC-CCceEEEEEE-CCCcchhh-hhhH-HHHHHHHHHHHHHHHhh-Chhh
Confidence 455 788899953221 122233333332 2655666654 22211100 0000 0112 333444444433 22
Q ss_pred CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCC
Q 008371 226 EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWD 265 (568)
Q Consensus 226 ~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d 265 (568)
..-+.++|+|.||.++=.++.+.+. .+|+-.|++++|-.
T Consensus 79 ~~G~~~IGfSQGgl~lRa~vq~c~~-~~V~nlISlggph~ 117 (279)
T PF02089_consen 79 ANGFNAIGFSQGGLFLRAYVQRCND-PPVHNLISLGGPHM 117 (279)
T ss_dssp TT-EEEEEETCHHHHHHHHHHH-TS-S-EEEEEEES--TT
T ss_pred hcceeeeeeccccHHHHHHHHHCCC-CCceeEEEecCccc
Confidence 1359999999999999999999875 37999999998653
No 205
>PLN02162 triacylglycerol lipase
Probab=94.07 E-value=0.12 Score=55.39 Aligned_cols=55 Identities=15% Similarity=0.233 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHH---hcCCC---CCceEEEEEcCCCC
Q 008371 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLG---ENGVN---TPLVGAAAICSPWD 265 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~---~~~~~---~~I~a~V~is~p~d 265 (568)
..+.+.++.+..++|..++++.|||+||.+|..++. ..+.. .++.+++..++|--
T Consensus 262 ~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRV 322 (475)
T PLN02162 262 YTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRV 322 (475)
T ss_pred HHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCc
Confidence 345666666667788889999999999999987654 22221 13567777777643
No 206
>PLN00413 triacylglycerol lipase
Probab=94.02 E-value=0.13 Score=55.32 Aligned_cols=54 Identities=17% Similarity=0.229 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHh---c-CC--CCCceEEEEEcCCCC
Q 008371 212 DLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGE---N-GV--NTPLVGAAAICSPWD 265 (568)
Q Consensus 212 Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~---~-~~--~~~I~a~V~is~p~d 265 (568)
++...++.+.+++|..++++.|||+||++|..++.. + +. ..++.++...++|--
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 566677777778999999999999999999976642 1 11 114567777777643
No 207
>PLN02209 serine carboxypeptidase
Probab=93.83 E-value=0.5 Score=51.26 Aligned_cols=114 Identities=14% Similarity=0.119 Sum_probs=66.3
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHH----------------HHH------hCCceEEEEc-CCCCCCCCCCCCCCCCC
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAF----------------KMA------GHGWNVVVSN-HRGLGGISLTSDCFYNG 207 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~----------------~l~------~~Gy~Vvv~D-~RG~G~S~~~~~~~~~~ 207 (568)
....|+|+++-|.+|+|.. + -.+.+ .+. .+-.+++-+| .-|.|-|-...+..+..
T Consensus 65 ~~~~Pl~lWlnGGPG~SS~-~-g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~ 142 (437)
T PLN02209 65 PQEDPLIIWLNGGPGCSCL-S-GLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERTS 142 (437)
T ss_pred CCCCCEEEEECCCCcHHHh-h-hHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCccC
Confidence 3567999999999997753 2 11110 010 0124688888 55788875333322211
Q ss_pred --CcHHHHHHHHHHHHHHCC---CCcEEEEEecHHHHHHHHHHHhc---C-----CCCCceEEEEEcCCCCh
Q 008371 208 --GWTEDLRRVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGEN---G-----VNTPLVGAAAICSPWDL 266 (568)
Q Consensus 208 --~~~~Dl~~vi~~l~~~~~---~~~i~lvG~SmGG~ial~ya~~~---~-----~~~~I~a~V~is~p~d~ 266 (568)
...+|+.+++...-+++| ..++++.|.|+||.-+-.++..- . ....++|+++.++..+.
T Consensus 143 ~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 143 DTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred CHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 123455555555555665 46899999999998665554331 1 12357888876664443
No 208
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=93.55 E-value=0.11 Score=54.76 Aligned_cols=109 Identities=18% Similarity=0.145 Sum_probs=82.1
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCC---CCCCCcHHHHHHHHHHHHHHCCCC
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDC---FYNGGWTEDLRRVIDYLHCQYPEV 227 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~---~~~~~~~~Dl~~vi~~l~~~~~~~ 227 (568)
+.++|+|+..-|+.-. ...........| + -+-+.+.+|=+|.|...+.. .......+|.+.+++.++..|++
T Consensus 60 ~~drPtV~~T~GY~~~-~~p~r~Ept~Ll-d--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~- 134 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVS-TSPRRSEPTQLL-D--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPG- 134 (448)
T ss_pred CCCCCeEEEecCcccc-cCccccchhHhh-c--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccC-
Confidence 5678999999998653 322323333333 2 37889999999998754321 11223458999999999999976
Q ss_pred cEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 228 PLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 228 ~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
+.+--|.|=||+.++.|=.-+|+ .|++.|...+|.+.
T Consensus 135 kWISTG~SKGGmTa~y~rrFyP~--DVD~tVaYVAP~~~ 171 (448)
T PF05576_consen 135 KWISTGGSKGGMTAVYYRRFYPD--DVDGTVAYVAPNDV 171 (448)
T ss_pred CceecCcCCCceeEEEEeeeCCC--CCCeeeeeeccccc
Confidence 79999999999999988888888 79999999998764
No 209
>PLN02934 triacylglycerol lipase
Probab=93.21 E-value=0.2 Score=54.43 Aligned_cols=54 Identities=15% Similarity=0.230 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHh---cCCC---CCceEEEEEcCCC
Q 008371 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGE---NGVN---TPLVGAAAICSPW 264 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~---~~~~---~~I~a~V~is~p~ 264 (568)
..+...++.+.+++|+.++++.|||+||.+|..++.. ..+. .++..++..++|-
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFGsPR 364 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFGQPR 364 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeCCCC
Confidence 3577777778888999999999999999999877532 1111 1244566776664
No 210
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.54 E-value=1.5 Score=45.86 Aligned_cols=242 Identities=13% Similarity=0.025 Sum_probs=120.4
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCC--CCcE
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYP--EVPL 229 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~--~~~i 229 (568)
..+|+|+++ ||.|+.+ .++........+.||.++.+-.+-+-..-..+.+. -...+....+..+...+. ..|+
T Consensus 37 s~k~Iv~~~-gWag~~~-r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s~~~---~sl~~~~~~l~~L~~~~~~~~~pi 111 (350)
T KOG2521|consen 37 SEKPIVVLL-GWAGAID-RNLMKYSKIYQDKGYIVVRITAPCPSVFLSASRRI---LSLSLASTRLSELLSDYNSDPCPI 111 (350)
T ss_pred ccccEEEEe-eeccccc-hhHHHHHHHHhcCCceEEEecCccccccccccccc---chhhHHHHHHHHHhhhccCCcCce
Confidence 344655554 5656544 57677888888999999988877654332222111 122444455555555443 5578
Q ss_pred EEEEecHHHHHHHHHH-Hh--c--CCCC-CceEEEEEcCCCChhhhhHHHhHHHH---HHHHHHHHHHHhHhhHHhhhhh
Q 008371 230 YAVGTSIGANILVKYL-GE--N--GVNT-PLVGAAAICSPWDLLICDRFINRRLV---QKCYDRVIAIGLRGFAQLHQST 300 (568)
Q Consensus 230 ~lvG~SmGG~ial~ya-~~--~--~~~~-~I~a~V~is~p~d~~~~~~~~~~~~~---~~~~~~~l~~~l~~~~~~~~~~ 300 (568)
+.--+|+||..++... .+ . +... ...+.+..+.|............... ..-...+.. ... +...
T Consensus 112 ~fh~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~-~~~-----~i~~ 185 (350)
T KOG2521|consen 112 IFHVFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWAR-LNY-----HITL 185 (350)
T ss_pred EEEEecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHh-cCe-----EEEE
Confidence 8889999998876543 11 1 2211 34556666666543221110000000 000000000 000 0000
Q ss_pred hhccCChhhhhccCCHHHHHHhhhcccCCCCC-HHHHHHhCCcccccCCCccceEEEEeCCCCCCCCCCcchH---HHhc
Q 008371 301 VARLADWEGITKSRSIRDFDNHATRVLGKFET-VDAYYRHSSSANFVRNVSVPLLCISTLDDPVCTREAIPWD---ECRA 376 (568)
Q Consensus 301 ~~~~~d~~~i~~~~~l~~fd~~~~~~~~g~~~-~~~yy~~~s~~~~l~~I~vPvLiI~G~dDpivp~~~~~~~---~~~~ 376 (568)
+ .+...+ .....+...+.....+... ..++|.. .-.....+.+.+.+..|.++|.+.+... ....
T Consensus 186 ~-~~~~~~-----~~~~~~~~~~~~~~~~r~~~~~~r~~~-----~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~ 254 (350)
T KOG2521|consen 186 L-TMAGNE-----GGAYLLGPLAEKISMSRKYHFLDRYEE-----QRNELPWNQLYLYSDNDDVLPADEIEKFIALRREK 254 (350)
T ss_pred E-Eeeecc-----cchhhhhhhhhccccccchHHHHHHHh-----hhhcccccceeecCCccccccHHHHHHHHHHHHhc
Confidence 0 000000 0000000000000011110 1111111 0112256788888999999998877653 2334
Q ss_pred CCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhhcC
Q 008371 377 NEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTS 418 (568)
Q Consensus 377 ~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~~ 418 (568)
.-++.-+-..++-|++++.. .+.-+.+...+|++.....
T Consensus 255 g~~v~s~~~~ds~H~~h~r~---~p~~y~~~~~~Fl~~~~~~ 293 (350)
T KOG2521|consen 255 GVNVKSVKFKDSEHVAHFRS---FPKTYLKKCSEFLRSVISS 293 (350)
T ss_pred CceEEEeeccCccceeeecc---CcHHHHHHHHHHHHhcccc
Confidence 55677777788999998874 4445779999999987643
No 211
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=92.29 E-value=0.26 Score=49.16 Aligned_cols=54 Identities=20% Similarity=0.288 Sum_probs=41.1
Q ss_pred cHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChh
Q 008371 209 WTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (568)
Q Consensus 209 ~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~ 267 (568)
+..+..+++..+++.||..+|.+.|||+||.+|..+-..++- -+|+..+|-+..
T Consensus 258 yySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl-----P~VaFesPGd~~ 311 (425)
T COG5153 258 YYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL-----PVVAFESPGDAY 311 (425)
T ss_pred hhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC-----ceEEecCchhhh
Confidence 335677778888999999999999999999999866666654 245566666553
No 212
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=92.29 E-value=0.26 Score=49.16 Aligned_cols=54 Identities=20% Similarity=0.288 Sum_probs=41.1
Q ss_pred cHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCChh
Q 008371 209 WTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDLL 267 (568)
Q Consensus 209 ~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~~ 267 (568)
+..+..+++..+++.||..+|.+.|||+||.+|..+-..++- -+|+..+|-+..
T Consensus 258 yySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fgl-----P~VaFesPGd~~ 311 (425)
T KOG4540|consen 258 YYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFGL-----PVVAFESPGDAY 311 (425)
T ss_pred hhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccCC-----ceEEecCchhhh
Confidence 335677778888999999999999999999999866666654 245566666553
No 213
>PLN02408 phospholipase A1
Probab=92.22 E-value=0.26 Score=51.71 Aligned_cols=54 Identities=24% Similarity=0.290 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHCCCC--cEEEEEecHHHHHHHHHHHhcCC---CCCceEEEEEcCCC
Q 008371 211 EDLRRVIDYLHCQYPEV--PLYAVGTSIGANILVKYLGENGV---NTPLVGAAAICSPW 264 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~~~--~i~lvG~SmGG~ial~ya~~~~~---~~~I~a~V~is~p~ 264 (568)
+++.+.+..+.++|+.. +|++.||||||.+|...+..... +.+...++..++|-
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPR 240 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPR 240 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCC
Confidence 55666677777788764 59999999999999876654322 11223355565553
No 214
>PLN02847 triacylglycerol lipase
Probab=91.63 E-value=1.1 Score=49.73 Aligned_cols=36 Identities=17% Similarity=0.121 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHh
Q 008371 212 DLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGE 247 (568)
Q Consensus 212 Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~ 247 (568)
++...+..+..++|+-+++++||||||.+|..++..
T Consensus 236 ~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 236 LSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 344444555667888899999999999999865443
No 215
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=91.07 E-value=0.39 Score=50.50 Aligned_cols=84 Identities=19% Similarity=0.202 Sum_probs=45.5
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhC--CceEEEEcCCCCCCCCCCCCCCCC--CCcHHHHHHHHHHHHHHCCCC
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGH--GWNVVVSNHRGLGGISLTSDCFYN--GGWTEDLRRVIDYLHCQYPEV 227 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~--Gy~Vvv~D~RG~G~S~~~~~~~~~--~~~~~Dl~~vi~~l~~~~~~~ 227 (568)
.+.-.||+.||+-| ....|+...+...... ++.++....+| ....+...... .+..+++.+.+... .-.
T Consensus 78 k~~HLvVlthGi~~-~~~~~~~~~~~~~~kk~p~~~iv~~g~~~--~~~~T~~Gv~~lG~Rla~~~~e~~~~~----si~ 150 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHG-ADMEYWKEKIEQMTKKMPDKLIVVRGKMN--NMCQTFDGVDVLGERLAEEVKETLYDY----SIE 150 (405)
T ss_pred CCceEEEecccccc-ccHHHHHHHHHhhhcCCCcceEeeecccc--chhhccccceeeecccHHHHhhhhhcc----ccc
Confidence 44568999999987 3345556666666654 34333333332 22222222111 22223333322221 135
Q ss_pred cEEEEEecHHHHHHH
Q 008371 228 PLYAVGTSIGANILV 242 (568)
Q Consensus 228 ~i~lvG~SmGG~ial 242 (568)
+|-.+|||+||.++.
T Consensus 151 kISfvghSLGGLvar 165 (405)
T KOG4372|consen 151 KISFVGHSLGGLVAR 165 (405)
T ss_pred eeeeeeeecCCeeee
Confidence 899999999999865
No 216
>PLN02571 triacylglycerol lipase
Probab=90.95 E-value=0.33 Score=51.70 Aligned_cols=37 Identities=16% Similarity=0.257 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHCCCC--cEEEEEecHHHHHHHHHHHh
Q 008371 211 EDLRRVIDYLHCQYPEV--PLYAVGTSIGANILVKYLGE 247 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~~~--~i~lvG~SmGG~ial~ya~~ 247 (568)
+++.+.+..+.++++.. +|++.||||||.+|+..|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 55666666667777654 68999999999999877654
No 217
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=90.82 E-value=0.24 Score=45.92 Aligned_cols=49 Identities=16% Similarity=0.211 Sum_probs=38.4
Q ss_pred HHHHHHHHH-CCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCCCh
Q 008371 215 RVIDYLHCQ-YPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPWDL 266 (568)
Q Consensus 215 ~vi~~l~~~-~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~d~ 266 (568)
+.-.|+... .|. ...+-|.||||..+.++.-++|+ ...++|+++..+|.
T Consensus 89 AyerYv~eEalpg-s~~~sgcsmGayhA~nfvfrhP~--lftkvialSGvYda 138 (227)
T COG4947 89 AYERYVIEEALPG-STIVSGCSMGAYHAANFVFRHPH--LFTKVIALSGVYDA 138 (227)
T ss_pred HHHHHHHHhhcCC-CccccccchhhhhhhhhheeChh--HhhhheeecceeeH
Confidence 334455554 344 46788999999999999999998 78899999887765
No 218
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=89.87 E-value=0.47 Score=49.66 Aligned_cols=60 Identities=22% Similarity=0.396 Sum_probs=44.1
Q ss_pred CCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHh---cCCC-CCceEEEEEcCCC
Q 008371 205 YNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGE---NGVN-TPLVGAAAICSPW 264 (568)
Q Consensus 205 ~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~---~~~~-~~I~a~V~is~p~ 264 (568)
+...|...+.+.++.+...+|+-.+.+.||||||.+|...+.. .+.. ..-.+++..+.|-
T Consensus 149 ~~~~~~~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PR 212 (336)
T KOG4569|consen 149 YTSLWNSGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPR 212 (336)
T ss_pred hccccHHHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCC
Confidence 3445667889999999999999999999999999999866543 2221 1344666676664
No 219
>PLN02310 triacylglycerol lipase
Probab=89.35 E-value=0.69 Score=49.21 Aligned_cols=53 Identities=21% Similarity=0.258 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHCC----CCcEEEEEecHHHHHHHHHHHhcC---CCCCceEEEEEcCCC
Q 008371 211 EDLRRVIDYLHCQYP----EVPLYAVGTSIGANILVKYLGENG---VNTPLVGAAAICSPW 264 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~----~~~i~lvG~SmGG~ial~ya~~~~---~~~~I~a~V~is~p~ 264 (568)
+.+.+.+..+...|+ ..+|.+.||||||.+|+..+.... ...++ .++..++|-
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v-~vyTFGsPR 248 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFV-SVISFGAPR 248 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcce-eEEEecCCC
Confidence 445555555555553 357999999999999987664321 11123 366666664
No 220
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=89.17 E-value=1.8 Score=48.42 Aligned_cols=109 Identities=21% Similarity=0.125 Sum_probs=63.3
Q ss_pred CcEEEEeCCCCC--CchhHH-HHHHHHHHHhCCceEEEEcCCC--CCCC-CCCCCCCCCCCcHHHHHHHHHHHHHH---C
Q 008371 154 NPIVVVIPGLTS--DSAAAY-IKHLAFKMAGHGWNVVVSNHRG--LGGI-SLTSDCFYNGGWTEDLRRVIDYLHCQ---Y 224 (568)
Q Consensus 154 ~PvVVllHGl~G--~s~~~y-~~~l~~~l~~~Gy~Vvv~D~RG--~G~S-~~~~~~~~~~~~~~Dl~~vi~~l~~~---~ 224 (568)
.|++|++||..- ++...+ .......+..+..-||.+++|= +|.- ........+.+ ..|...+++|+++. +
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~g-l~Dq~~AL~wv~~~I~~F 190 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLG-LFDQLLALRWVKDNIPSF 190 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCccc-HHHHHHHHHHHHHHHHhc
Confidence 799999999421 121111 1223334445568899999993 3311 11111112222 25999999999876 2
Q ss_pred C--CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCC
Q 008371 225 P--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSP 263 (568)
Q Consensus 225 ~--~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p 263 (568)
+ ..+|.++|||.||..+.........+..+..+|..++.
T Consensus 191 GGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~ 231 (545)
T KOG1516|consen 191 GGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGN 231 (545)
T ss_pred CCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccc
Confidence 2 45799999999999986544322211245566666543
No 221
>PLN02324 triacylglycerol lipase
Probab=89.13 E-value=0.59 Score=49.80 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHCCCC--cEEEEEecHHHHHHHHHHHh
Q 008371 211 EDLRRVIDYLHCQYPEV--PLYAVGTSIGANILVKYLGE 247 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~~~--~i~lvG~SmGG~ial~ya~~ 247 (568)
+.+.+.|..+..+|++. .|.+.||||||.+|+..|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 56666677777888753 69999999999999877643
No 222
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=89.12 E-value=4.1 Score=44.28 Aligned_cols=130 Identities=18% Similarity=0.209 Sum_probs=74.8
Q ss_pred EEEEcC--CCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCchhHHHHHHHHHHH----h-C-------
Q 008371 117 HLFQTP--DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSAAAYIKHLAFKMA----G-H------- 182 (568)
Q Consensus 117 ~~~~~~--DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~~~y~~~l~~~l~----~-~------- 182 (568)
-++... +|..+.+.+++... ....+|+||.+-|.+|+|.- ..+..++- . .
T Consensus 47 GYv~v~~~~~~~LFYwf~eS~~-------------~P~~dPlvLWLnGGPGCSSl---~G~~~E~GPf~v~~~G~tL~~N 110 (454)
T KOG1282|consen 47 GYVTVNESEGRQLFYWFFESEN-------------NPETDPLVLWLNGGPGCSSL---GGLFEENGPFRVKYNGKTLYLN 110 (454)
T ss_pred ceEECCCCCCceEEEEEEEccC-------------CCCCCCEEEEeCCCCCccch---hhhhhhcCCeEEcCCCCcceeC
Confidence 356665 57788885554322 13568999999999998752 12222220 0 1
Q ss_pred ------CceEEEEcCC-CCCCCCCCCCCCCC---CCcHHHHHHHHHHHHHHCC---CCcEEEEEecHHHHHHHHHHHh--
Q 008371 183 ------GWNVVVSNHR-GLGGISLTSDCFYN---GGWTEDLRRVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGE-- 247 (568)
Q Consensus 183 ------Gy~Vvv~D~R-G~G~S~~~~~~~~~---~~~~~Dl~~vi~~l~~~~~---~~~i~lvG~SmGG~ial~ya~~-- 247 (568)
--+++-+|.| |.|-|--.....+. .+.++|...++...-+++| ..++++.|-|++|..+-.+|.+
T Consensus 111 ~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~ 190 (454)
T KOG1282|consen 111 PYSWNKEANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEIL 190 (454)
T ss_pred CccccccccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHH
Confidence 1245666655 56655422222222 2233576666655555666 5789999999999766555433
Q ss_pred --cC----CCCCceEEEEEcC
Q 008371 248 --NG----VNTPLVGAAAICS 262 (568)
Q Consensus 248 --~~----~~~~I~a~V~is~ 262 (568)
.. ....++|+++-++
T Consensus 191 ~~N~~~~~~~iNLkG~~IGNg 211 (454)
T KOG1282|consen 191 KGNKKCCKPNINLKGYAIGNG 211 (454)
T ss_pred hccccccCCcccceEEEecCc
Confidence 21 1125777775444
No 223
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=88.63 E-value=2.5 Score=45.82 Aligned_cols=96 Identities=17% Similarity=0.169 Sum_probs=62.4
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHH---HhCC---------------ceEEEEc-CCCCCCCCC--CCCCCCCCCc
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKM---AGHG---------------WNVVVSN-HRGLGGISL--TSDCFYNGGW 209 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l---~~~G---------------y~Vvv~D-~RG~G~S~~--~~~~~~~~~~ 209 (568)
..++|+++.+.|.+|+|.. + -.+.+.= ...| =.++-+| .-|.|.|.. ........+.
T Consensus 98 p~~rPvi~wlNGGPGcSS~-~-g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~ 175 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSV-T-GLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGA 175 (498)
T ss_pred CCCCceEEEecCCCChHhh-h-hhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhcc
Confidence 3578999999999997653 3 1221110 0001 2577788 567777753 2222222445
Q ss_pred HHHHHHHHHHHHHHCC-----CCcEEEEEecHHHHHHHHHHHhc
Q 008371 210 TEDLRRVIDYLHCQYP-----EVPLYAVGTSIGANILVKYLGEN 248 (568)
Q Consensus 210 ~~Dl~~vi~~l~~~~~-----~~~i~lvG~SmGG~ial~ya~~~ 248 (568)
.+|+..+.+.+.+.++ ..+.+++|-|+||.-+..+|.+-
T Consensus 176 ~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L 219 (498)
T COG2939 176 GKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHEL 219 (498)
T ss_pred chhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHH
Confidence 5899999998887664 34899999999999887776543
No 224
>PLN02802 triacylglycerol lipase
Probab=87.82 E-value=0.76 Score=50.00 Aligned_cols=37 Identities=22% Similarity=0.288 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHCCCC--cEEEEEecHHHHHHHHHHHh
Q 008371 211 EDLRRVIDYLHCQYPEV--PLYAVGTSIGANILVKYLGE 247 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~~~--~i~lvG~SmGG~ial~ya~~ 247 (568)
+++.+-+..+.++|++. .|++.||||||.+|...+..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 45666666666777653 68999999999999876654
No 225
>PLN02719 triacylglycerol lipase
Probab=87.66 E-value=0.93 Score=49.40 Aligned_cols=38 Identities=18% Similarity=0.289 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHCCC-----CcEEEEEecHHHHHHHHHHHh
Q 008371 210 TEDLRRVIDYLHCQYPE-----VPLYAVGTSIGANILVKYLGE 247 (568)
Q Consensus 210 ~~Dl~~vi~~l~~~~~~-----~~i~lvG~SmGG~ial~ya~~ 247 (568)
.+++.+.|..+.++|+. .+|.+.||||||.+|+..|..
T Consensus 276 ReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 276 REQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 35677777777777764 379999999999999876643
No 226
>PLN03037 lipase class 3 family protein; Provisional
Probab=87.35 E-value=0.75 Score=50.16 Aligned_cols=36 Identities=22% Similarity=0.266 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHCC----CCcEEEEEecHHHHHHHHHHHh
Q 008371 212 DLRRVIDYLHCQYP----EVPLYAVGTSIGANILVKYLGE 247 (568)
Q Consensus 212 Dl~~vi~~l~~~~~----~~~i~lvG~SmGG~ial~ya~~ 247 (568)
++.+.|..+.+.|+ ..+|.+.||||||.+|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34444455555553 3469999999999999876644
No 227
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=87.29 E-value=1.1 Score=42.63 Aligned_cols=67 Identities=13% Similarity=0.133 Sum_probs=44.6
Q ss_pred CCC-ccceEEEEeCCCCCCCCCCcc--hHHHhcCC--CEEEEEeCCCCccccccccccCcccHHHHHHHHHHH
Q 008371 347 RNV-SVPLLCISTLDDPVCTREAIP--WDECRANE--KIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDA 414 (568)
Q Consensus 347 ~~I-~vPvLiI~G~dDpivp~~~~~--~~~~~~~~--~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~ 414 (568)
..| ++++|-|-|+.|.|+...... ..+|...| .....+.+++||.|.|.|. .....+...|.+|+.+
T Consensus 130 ~aI~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~-rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 130 AAIRRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGS-RWREEIYPRIREFIRQ 201 (202)
T ss_pred HHcccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccch-hhhhhhhHHHHHHHHh
Confidence 355 678888999999999876432 23454443 3566777899999999862 1112234567777764
No 228
>PLN02753 triacylglycerol lipase
Probab=86.49 E-value=0.93 Score=49.52 Aligned_cols=36 Identities=14% Similarity=0.198 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHHCC-----CCcEEEEEecHHHHHHHHHHH
Q 008371 211 EDLRRVIDYLHCQYP-----EVPLYAVGTSIGANILVKYLG 246 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~-----~~~i~lvG~SmGG~ial~ya~ 246 (568)
+++.+.|..+..+|+ ..+|.+.|||+||.+|+..|.
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 566666677777775 358999999999999987664
No 229
>PLN02761 lipase class 3 family protein
Probab=86.39 E-value=1 Score=49.26 Aligned_cols=37 Identities=22% Similarity=0.277 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHCC------CCcEEEEEecHHHHHHHHHHH
Q 008371 210 TEDLRRVIDYLHCQYP------EVPLYAVGTSIGANILVKYLG 246 (568)
Q Consensus 210 ~~Dl~~vi~~l~~~~~------~~~i~lvG~SmGG~ial~ya~ 246 (568)
.+++.+.|..+...|+ ..+|.+.||||||.+|...+.
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 3567777777777773 246999999999999986664
No 230
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=84.09 E-value=7.3 Score=36.76 Aligned_cols=41 Identities=17% Similarity=0.279 Sum_probs=35.6
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcC
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~ 191 (568)
...+|.+|++-|+.|+..+.....+.+.|.++|++|+++|-
T Consensus 19 ~~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 19 KGQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred hCCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 35678999999999988887777888899999999999994
No 231
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=82.73 E-value=5 Score=39.49 Aligned_cols=83 Identities=17% Similarity=0.174 Sum_probs=45.9
Q ss_pred CceEEEEcCCC-CCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC-CCCcEEEEEecHHHHHHHHHHHhcCC---C-CCceE
Q 008371 183 GWNVVVSNHRG-LGGISLTSDCFYNGGWTEDLRRVIDYLHCQY-PEVPLYAVGTSIGANILVKYLGENGV---N-TPLVG 256 (568)
Q Consensus 183 Gy~Vvv~D~RG-~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~-~~~~i~lvG~SmGG~ial~ya~~~~~---~-~~I~a 256 (568)
|+++..++++. ++-........+...-.+-+..+.+.++... ...+++++|+|.||.++...+.+... . ..-..
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~ 81 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLS 81 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceE
Confidence 67888888887 2221111011121111222333333444322 46789999999999999877665422 1 12446
Q ss_pred EEEEcCCCC
Q 008371 257 AAAICSPWD 265 (568)
Q Consensus 257 ~V~is~p~d 265 (568)
.|+++.|..
T Consensus 82 fVl~gnP~r 90 (225)
T PF08237_consen 82 FVLIGNPRR 90 (225)
T ss_pred EEEecCCCC
Confidence 777877643
No 232
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=81.94 E-value=3.1 Score=43.56 Aligned_cols=43 Identities=23% Similarity=0.213 Sum_probs=33.5
Q ss_pred CCCcEEEEEecHHHHHHHHHHHhcCCC---CCceEEEEEcCCCChh
Q 008371 225 PEVPLYAVGTSIGANILVKYLGENGVN---TPLVGAAAICSPWDLL 267 (568)
Q Consensus 225 ~~~~i~lvG~SmGG~ial~ya~~~~~~---~~I~a~V~is~p~d~~ 267 (568)
+.+|+.+||||||+-+....+.+-.+. ..|..+++++.|....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~ 263 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSD 263 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCC
Confidence 567999999999999988766554332 2489999999887654
No 233
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=81.56 E-value=5.4 Score=41.39 Aligned_cols=78 Identities=19% Similarity=0.181 Sum_probs=49.1
Q ss_pred eEEEEcCC-CCCCCCCCCCCCCCC--CcHHHHHHHHHHHHHHCC---CCcEEEEEecHHHHHHHHHHHhc---C-----C
Q 008371 185 NVVVSNHR-GLGGISLTSDCFYNG--GWTEDLRRVIDYLHCQYP---EVPLYAVGTSIGANILVKYLGEN---G-----V 250 (568)
Q Consensus 185 ~Vvv~D~R-G~G~S~~~~~~~~~~--~~~~Dl~~vi~~l~~~~~---~~~i~lvG~SmGG~ial~ya~~~---~-----~ 250 (568)
+++-+|.| |.|-|-...+..+.. ...+|+..++...-+++| ..++++.|-|+||.-+-.++.+- . .
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 68889988 888885433322221 123677766666666665 57899999999998766555432 1 1
Q ss_pred CCCceEEEEEcC
Q 008371 251 NTPLVGAAAICS 262 (568)
Q Consensus 251 ~~~I~a~V~is~ 262 (568)
...++|+++-++
T Consensus 83 ~inLkGi~IGNg 94 (319)
T PLN02213 83 PINLQGYMLGNP 94 (319)
T ss_pred ceeeeEEEeCCC
Confidence 125777765444
No 234
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=81.01 E-value=3.6 Score=45.19 Aligned_cols=101 Identities=16% Similarity=0.125 Sum_probs=62.5
Q ss_pred CCcEEEEeCCCC-----CCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC---
Q 008371 153 KNPIVVVIPGLT-----SDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY--- 224 (568)
Q Consensus 153 ~~PvVVllHGl~-----G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~--- 224 (568)
.+-+|+-|||.+ .-|++.|++.++..| |+.++.+||-=.-.-+. ....+++-.+..|+....
T Consensus 395 S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL---~cPiiSVdYSLAPEaPF-------PRaleEv~fAYcW~inn~all 464 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQSSKSHEPYLRSWAQAL---GCPIISVDYSLAPEAPF-------PRALEEVFFAYCWAINNCALL 464 (880)
T ss_pred CceEEEEecCCceeeeccccccHHHHHHHHHh---CCCeEEeeeccCCCCCC-------CcHHHHHHHHHHHHhcCHHHh
Confidence 455788899842 124577877665554 78999999853322222 234577777777775432
Q ss_pred --CCCcEEEEEecHHHHHHHHHHH---hcCCCCCceEEEEEcCCC
Q 008371 225 --PEVPLYAVGTSIGANILVKYLG---ENGVNTPLVGAAAICSPW 264 (568)
Q Consensus 225 --~~~~i~lvG~SmGG~ial~ya~---~~~~~~~I~a~V~is~p~ 264 (568)
-.++|+++|-|.||++....+. +++-. .-+|+++.=+|.
T Consensus 465 G~TgEriv~aGDSAGgNL~~~VaLr~i~~gvR-vPDGl~laY~pt 508 (880)
T KOG4388|consen 465 GSTGERIVLAGDSAGGNLCFTVALRAIAYGVR-VPDGLMLAYPPT 508 (880)
T ss_pred CcccceEEEeccCCCcceeehhHHHHHHhCCC-CCCceEEecChh
Confidence 2579999999999998654432 23321 235666544443
No 235
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=75.17 E-value=15 Score=37.73 Aligned_cols=97 Identities=20% Similarity=0.297 Sum_probs=63.5
Q ss_pred CCCCcEEEEeCCCC---CCchhHHHHHHHHHHHh-CCceEEEEcCCCCCCCCCCC------------C-CCCCCCcHHHH
Q 008371 151 CEKNPIVVVIPGLT---SDSAAAYIKHLAFKMAG-HGWNVVVSNHRGLGGISLTS------------D-CFYNGGWTEDL 213 (568)
Q Consensus 151 ~~~~PvVVllHGl~---G~s~~~y~~~l~~~l~~-~Gy~Vvv~D~RG~G~S~~~~------------~-~~~~~~~~~Dl 213 (568)
+..+-+|+.+-|.. |...-.-+-.+...|.. .|-+++++=-.|.|...... . ..+..+....+
T Consensus 28 ds~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI 107 (423)
T COG3673 28 DSMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNI 107 (423)
T ss_pred cCcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 44566777777742 11111122345555655 57889998889988652211 1 12223445778
Q ss_pred HHHHHHHHHHC-CCCcEEEEEecHHHHHHHHHHHh
Q 008371 214 RRVIDYLHCQY-PEVPLYAVGTSIGANILVKYLGE 247 (568)
Q Consensus 214 ~~vi~~l~~~~-~~~~i~lvG~SmGG~ial~ya~~ 247 (568)
..+..++...| |+..|+++|+|-|+.++--+|+.
T Consensus 108 ~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 108 REAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 88888888887 67899999999999998877765
No 236
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=74.85 E-value=14 Score=44.25 Aligned_cols=98 Identities=15% Similarity=0.105 Sum_probs=59.2
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCC-CCCCCCCCCCCcHHHH-HHHHHHHHHHCCCCc
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGI-SLTSDCFYNGGWTEDL-RRVIDYLHCQYPEVP 228 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S-~~~~~~~~~~~~~~Dl-~~vi~~l~~~~~~~~ 228 (568)
....|+++|+|-+.|. .... ..++..+ .+ +-+|.- ....| .+..+++ ...|+.+++-.|..|
T Consensus 2120 ~se~~~~Ffv~pIEG~-tt~l-~~la~rl-----e~-----PaYglQ~T~~vP----~dSies~A~~yirqirkvQP~GP 2183 (2376)
T KOG1202|consen 2120 QSEEPPLFFVHPIEGF-TTAL-ESLASRL-----EI-----PAYGLQCTEAVP----LDSIESLAAYYIRQIRKVQPEGP 2183 (2376)
T ss_pred cccCCceEEEeccccc-hHHH-HHHHhhc-----CC-----cchhhhccccCC----cchHHHHHHHHHHHHHhcCCCCC
Confidence 3456789999999763 2222 3343333 22 222211 10011 1233444 445677777788999
Q ss_pred EEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCC
Q 008371 229 LYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (568)
Q Consensus 229 i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~ 264 (568)
..++|+|+|+.++..++....+......+|+++...
T Consensus 2184 Yrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2184 YRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred eeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 999999999999998887655433455577776543
No 237
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=73.88 E-value=17 Score=36.98 Aligned_cols=94 Identities=20% Similarity=0.239 Sum_probs=55.4
Q ss_pred cEEEEeCCCCCCchh----HHHHHHHHHH-HhCCceEEEEcCCCCCCC--------CCC----CCCCCCCCcHHHHHHHH
Q 008371 155 PIVVVIPGLTSDSAA----AYIKHLAFKM-AGHGWNVVVSNHRGLGGI--------SLT----SDCFYNGGWTEDLRRVI 217 (568)
Q Consensus 155 PvVVllHGl~G~s~~----~y~~~l~~~l-~~~Gy~Vvv~D~RG~G~S--------~~~----~~~~~~~~~~~Dl~~vi 217 (568)
.+||++=|...+... .-+..+.+.+ ...+-+.+++=..|.|.. ... ....+..+..+.+..+.
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 356666665433221 1123444555 222334555556777761 110 01122234557888888
Q ss_pred HHHHHHC-CCCcEEEEEecHHHHHHHHHHHhc
Q 008371 218 DYLHCQY-PEVPLYAVGTSIGANILVKYLGEN 248 (568)
Q Consensus 218 ~~l~~~~-~~~~i~lvG~SmGG~ial~ya~~~ 248 (568)
.++.+.+ +..+|+++|+|-||.+|-.++..-
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 8887776 567899999999999998877654
No 238
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=72.64 E-value=11 Score=41.00 Aligned_cols=102 Identities=18% Similarity=0.173 Sum_probs=60.8
Q ss_pred cCCCCCcEEEEeCCCCCCch-hHHHHHHHHHHHhCCc-eEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHC--
Q 008371 149 LNCEKNPIVVVIPGLTSDSA-AAYIKHLAFKMAGHGW-NVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQY-- 224 (568)
Q Consensus 149 ~~~~~~PvVVllHGl~G~s~-~~y~~~l~~~l~~~Gy-~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~-- 224 (568)
|.+-+.|..|.+-|+-..-. +.| .++..| |. -.+.-|.|=-|++=.. .+....+-+.++|+.-.+..
T Consensus 284 PGD~KPPL~VYFSGyR~aEGFEgy--~MMk~L---g~PfLL~~DpRleGGaFYl----Gs~eyE~~I~~~I~~~L~~LgF 354 (511)
T TIGR03712 284 PGDFKPPLNVYFSGYRPAEGFEGY--FMMKRL---GAPFLLIGDPRLEGGAFYL----GSDEYEQGIINVIQEKLDYLGF 354 (511)
T ss_pred CcCCCCCeEEeeccCcccCcchhH--HHHHhc---CCCeEEeeccccccceeee----CcHHHHHHHHHHHHHHHHHhCC
Confidence 55667889999999853111 223 233333 44 3455677776654211 01112244555554444433
Q ss_pred CCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcCCC
Q 008371 225 PEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICSPW 264 (568)
Q Consensus 225 ~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~p~ 264 (568)
....+++-|.|||..-|+.|++.... .+|.++-|.
T Consensus 355 ~~~qLILSGlSMGTfgAlYYga~l~P-----~AIiVgKPL 389 (511)
T TIGR03712 355 DHDQLILSGLSMGTFGALYYGAKLSP-----HAIIVGKPL 389 (511)
T ss_pred CHHHeeeccccccchhhhhhcccCCC-----ceEEEcCcc
Confidence 34579999999999999999988754 455566554
No 239
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=69.93 E-value=46 Score=36.63 Aligned_cols=89 Identities=16% Similarity=0.083 Sum_probs=58.5
Q ss_pred HHHHhCCceEEEEcCCCCCCCCCCCCCCC--C--------CCcHHHHHHHHHHHHHH-C--CCCcEEEEEecHHHHHHHH
Q 008371 177 FKMAGHGWNVVVSNHRGLGGISLTSDCFY--N--------GGWTEDLRRVIDYLHCQ-Y--PEVPLYAVGTSIGANILVK 243 (568)
Q Consensus 177 ~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~--~--------~~~~~Dl~~vi~~l~~~-~--~~~~i~lvG~SmGG~ial~ 243 (568)
.....+||.++.-|- ||..+.......+ + .....+...+-+.|.+. | +...-+..|.|-||--++.
T Consensus 53 ~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~ 131 (474)
T PF07519_consen 53 ATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLM 131 (474)
T ss_pred chhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHH
Confidence 344567999999995 7776643101111 1 11112333333344433 2 2345799999999999999
Q ss_pred HHHhcCCCCCceEEEEEcCCCChhh
Q 008371 244 YLGENGVNTPLVGAAAICSPWDLLI 268 (568)
Q Consensus 244 ya~~~~~~~~I~a~V~is~p~d~~~ 268 (568)
.|.++|+ ..+|+++-+|.++...
T Consensus 132 ~AQryP~--dfDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 132 AAQRYPE--DFDGILAGAPAINWTH 154 (474)
T ss_pred HHHhChh--hcCeEEeCCchHHHHH
Confidence 9999999 7999999988776643
No 240
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=68.82 E-value=8.6 Score=34.18 Aligned_cols=33 Identities=18% Similarity=0.280 Sum_probs=23.6
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCC
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHG 183 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~G 183 (568)
.+.+|.|+-+||++|.......+-+++.+-..|
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 467899999999998765433345566666665
No 241
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=66.44 E-value=11 Score=34.95 Aligned_cols=40 Identities=15% Similarity=0.301 Sum_probs=33.1
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCC
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG 193 (568)
+|.||++-|+.|+..+...+.+...|.+.|+.|+.+|-.-
T Consensus 1 ~g~vIwltGlsGsGKtTlA~~L~~~L~~~g~~~~~LDgD~ 40 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKTTLARALERRLFARGIKVYLLDGDN 40 (156)
T ss_dssp S-EEEEEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEHHH
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEecCcc
Confidence 4789999999998888888889999999999999998543
No 242
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=55.30 E-value=25 Score=39.09 Aligned_cols=55 Identities=18% Similarity=0.205 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHC-C-CCcEEEEEecHHHHHHHHHHHhc-----CC----CCCceEEEEEcCCCChh
Q 008371 213 LRRVIDYLHCQY-P-EVPLYAVGTSIGANILVKYLGEN-----GV----NTPLVGAAAICSPWDLL 267 (568)
Q Consensus 213 l~~vi~~l~~~~-~-~~~i~lvG~SmGG~ial~ya~~~-----~~----~~~I~a~V~is~p~d~~ 267 (568)
..++++.+.+.. + ++|++.+||||||.++=+.+-.. |+ ...-+|++.++.|....
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrGS 575 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRGS 575 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCCC
Confidence 445666665542 3 67999999999998876655332 21 12467888888875443
No 243
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A.
Probab=55.01 E-value=25 Score=31.73 Aligned_cols=44 Identities=23% Similarity=0.416 Sum_probs=33.3
Q ss_pred EEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCC
Q 008371 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLT 200 (568)
Q Consensus 157 VVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~ 200 (568)
+|.+-|..++-....++.++..|.++||+|.++=+-+||+....
T Consensus 2 vv~VvG~~~sGKTTl~~~Li~~l~~~g~~v~~ik~~~~g~~~~d 45 (140)
T PF03205_consen 2 VVQVVGPKNSGKTTLIRKLINELKRRGYRVAVIKHTDHGQFEID 45 (140)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEE-STTSTTCS
T ss_pred EEEEECCCCCCHHHHHHHHHHHHhHcCCceEEEEEccCCCcccC
Confidence 56666777777889999999999999999998888888776654
No 244
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=54.86 E-value=1.2e+02 Score=25.84 Aligned_cols=83 Identities=14% Similarity=0.109 Sum_probs=55.4
Q ss_pred HHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHHHHH--HHHHHHhc
Q 008371 171 YIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIGANI--LVKYLGEN 248 (568)
Q Consensus 171 y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~i--al~ya~~~ 248 (568)
....+.+.+..+||-.-.+.+|..|.+-. .....+..+-=...++.+.+.+|+.++++||=|=-.=. -..++.++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~---~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~ 88 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLS---GLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRF 88 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCcccc---ccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHC
Confidence 33667777777889888888888865431 11222222344667788889999999999998854432 23457788
Q ss_pred CCCCCceEEE
Q 008371 249 GVNTPLVGAA 258 (568)
Q Consensus 249 ~~~~~I~a~V 258 (568)
|+ +|.++.
T Consensus 89 P~--~i~ai~ 96 (100)
T PF09949_consen 89 PG--RILAIY 96 (100)
T ss_pred CC--CEEEEE
Confidence 88 677664
No 245
>PF03283 PAE: Pectinacetylesterase
Probab=54.43 E-value=14 Score=39.04 Aligned_cols=35 Identities=26% Similarity=0.245 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHH-CC-CCcEEEEEecHHHHHHHHHH
Q 008371 211 EDLRRVIDYLHCQ-YP-EVPLYAVGTSIGANILVKYL 245 (568)
Q Consensus 211 ~Dl~~vi~~l~~~-~~-~~~i~lvG~SmGG~ial~ya 245 (568)
.-++++++++..+ .+ .+++++.|.|.||.-++..+
T Consensus 138 ~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~ 174 (361)
T PF03283_consen 138 RILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHA 174 (361)
T ss_pred HHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHH
Confidence 5688999999887 54 35799999999999887543
No 246
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=53.54 E-value=18 Score=31.44 Aligned_cols=31 Identities=13% Similarity=0.109 Sum_probs=15.7
Q ss_pred CCCEEEEEEeccCccccCCccccccccCCCCCcEEEEeCCCCCCch
Q 008371 123 DGGTIALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLTSDSA 168 (568)
Q Consensus 123 DGg~l~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~G~s~ 168 (568)
||..|.+-..... +.+...+|++||++|+--
T Consensus 76 ~g~~iHFih~rs~---------------~~~aiPLll~HGWPgSf~ 106 (112)
T PF06441_consen 76 DGLDIHFIHVRSK---------------RPNAIPLLLLHGWPGSFL 106 (112)
T ss_dssp TTEEEEEEEE--S----------------TT-EEEEEE--SS--GG
T ss_pred eeEEEEEEEeeCC---------------CCCCeEEEEECCCCccHH
Confidence 6888876544332 345556899999998543
No 247
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=50.71 E-value=42 Score=31.12 Aligned_cols=75 Identities=21% Similarity=0.216 Sum_probs=47.0
Q ss_pred EEEEeCCCCCCchhHHHHHHHHHHHhCCc-eEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEe
Q 008371 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGW-NVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (568)
Q Consensus 156 vVVllHGl~G~s~~~y~~~l~~~l~~~Gy-~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~ 234 (568)
.||++-|| |+..+.. .++. ....+ -++++|++....- -|+.+ | ..+.+|.+
T Consensus 13 LIvyFaGw-gtpps~v-~HLi---lpeN~dl~lcYDY~dl~ld-------------fDfsA--------y--~hirlvAw 64 (214)
T COG2830 13 LIVYFAGW-GTPPSAV-NHLI---LPENHDLLLCYDYQDLNLD-------------FDFSA--------Y--RHIRLVAW 64 (214)
T ss_pred EEEEEecC-CCCHHHH-hhcc---CCCCCcEEEEeehhhcCcc-------------cchhh--------h--hhhhhhhh
Confidence 78888999 4443332 3332 33444 5678888764310 11111 1 24678999
Q ss_pred cHHHHHHHHHHHhcCCCCCceEEEEEcC
Q 008371 235 SIGANILVKYLGENGVNTPLVGAAAICS 262 (568)
Q Consensus 235 SmGG~ial~ya~~~~~~~~I~a~V~is~ 262 (568)
|||-.+|-+.+... +++.+++|++
T Consensus 65 SMGVwvAeR~lqg~----~lksatAiNG 88 (214)
T COG2830 65 SMGVWVAERVLQGI----RLKSATAING 88 (214)
T ss_pred hHHHHHHHHHHhhc----cccceeeecC
Confidence 99999998888765 5777888765
No 248
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=50.70 E-value=83 Score=30.60 Aligned_cols=56 Identities=29% Similarity=0.386 Sum_probs=39.2
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCc-eEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHH
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGW-NVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQ 223 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy-~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~ 223 (568)
+.+.-+|+++||..-.+.+.| ..+-.-+.+.|| +|++...-|+. ++..+++++++.
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~Y-acLd~~~~~~~f~~v~v~~ve~yP----------------~~d~vi~~l~~~ 191 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAY-ACLDHVLDEYGFDNVFVAAVEGYP----------------LVDTVIEYLRKN 191 (265)
T ss_pred CcCeEEEEEecCCCccHHHHH-HHHHHHHHhcCCCceEEEEecCCC----------------cHHHHHHHHHHc
Confidence 455678999999865555555 456666778899 77777665542 356788888765
No 249
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=49.73 E-value=33 Score=37.52 Aligned_cols=44 Identities=20% Similarity=0.172 Sum_probs=33.4
Q ss_pred CCCCcEEEEEecHHHHHHHHHHHhc---CCCCCceEEEEEcCCCChh
Q 008371 224 YPEVPLYAVGTSIGANILVKYLGEN---GVNTPLVGAAAICSPWDLL 267 (568)
Q Consensus 224 ~~~~~i~lvG~SmGG~ial~ya~~~---~~~~~I~a~V~is~p~d~~ 267 (568)
.+.+|+.+||||+|+-+....+.+. .+-.-|.-+++++.|....
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 4678999999999999988765532 2222588999999987664
No 250
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=46.31 E-value=25 Score=35.42 Aligned_cols=40 Identities=13% Similarity=0.286 Sum_probs=34.8
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcC
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~ 191 (568)
...|+||++.|+-++....-++.+...+-.+|++|+++.-
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~ 92 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKA 92 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCC
Confidence 3569999999998877788889999999999999999843
No 251
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=44.65 E-value=38 Score=37.22 Aligned_cols=67 Identities=13% Similarity=0.058 Sum_probs=45.7
Q ss_pred CCccceEEEEeCCCCCCCCCCcc-hH---HHh-------cCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhh
Q 008371 348 NVSVPLLCISTLDDPVCTREAIP-WD---ECR-------ANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALN 416 (568)
Q Consensus 348 ~I~vPvLiI~G~dDpivp~~~~~-~~---~~~-------~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~ 416 (568)
+---.+|+.||..|+++|+.... +. ... .....++.++|+.+||.--.+. .+.=....+.+|+++=.
T Consensus 351 ~~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~--~~~d~l~aL~~WVE~G~ 428 (474)
T PF07519_consen 351 ARGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGP--DPFDALTALVDWVENGK 428 (474)
T ss_pred hcCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCC--CCCCHHHHHHHHHhCCC
Confidence 33568999999999999987432 21 111 2346899999999999854432 22235678888888543
No 252
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=43.04 E-value=1.6e+02 Score=31.23 Aligned_cols=66 Identities=9% Similarity=0.096 Sum_probs=46.8
Q ss_pred cCCCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccCcccHHHHHHHHHHHhhcC
Q 008371 346 VRNVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAKSLWWVRAVNVFLDALNTS 418 (568)
Q Consensus 346 l~~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~~i~eFL~~~~~~ 418 (568)
-.++..|-.+++|..|.+.++++.............+.++|+..|..... ...+.+.-|++.+...
T Consensus 325 ~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n~-------~i~esl~~flnrfq~~ 390 (507)
T COG4287 325 QLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLINQ-------FIKESLEPFLNRFQMY 390 (507)
T ss_pred hhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhHH-------HHHHHHHHHHHHHhcC
Confidence 35788999999999999888887665444445567788999999975332 3445666666666544
No 253
>PRK00889 adenylylsulfate kinase; Provisional
Probab=41.70 E-value=55 Score=30.25 Aligned_cols=37 Identities=24% Similarity=0.334 Sum_probs=31.2
Q ss_pred cEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcC
Q 008371 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (568)
Q Consensus 155 PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~ 191 (568)
+.+|++.|+.|+..+...+.++..+...|+.+..+|.
T Consensus 4 g~~i~~~G~~GsGKST~a~~la~~l~~~g~~v~~id~ 40 (175)
T PRK00889 4 GVTVWFTGLSGAGKTTIARALAEKLREAGYPVEVLDG 40 (175)
T ss_pred CeEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 4488889999988888888899998888888888864
No 254
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=40.66 E-value=35 Score=33.72 Aligned_cols=74 Identities=15% Similarity=0.117 Sum_probs=49.3
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCC-CCcEE
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYP-EVPLY 230 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~-~~~i~ 230 (568)
.+.|+||++.|+-++....-++.+...+-.+|++|.++.-+-- .+.-...+-......| ...|.
T Consensus 28 ~~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt~---------------eE~~~p~lwRfw~~lP~~G~i~ 92 (230)
T TIGR03707 28 TGARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPSD---------------RERTQWYFQRYVQHLPAAGEIV 92 (230)
T ss_pred cCCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCH---------------HHHcChHHHHHHHhCCCCCeEE
Confidence 3469999999998877788889999999999999998754321 1112222333333444 45677
Q ss_pred EEEecHHHHH
Q 008371 231 AVGTSIGANI 240 (568)
Q Consensus 231 lvG~SmGG~i 240 (568)
++=-|+=+-+
T Consensus 93 IF~rSwY~~~ 102 (230)
T TIGR03707 93 LFDRSWYNRA 102 (230)
T ss_pred EEeCchhhhH
Confidence 7777764443
No 255
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies.The domain contains a putative ATP binding P-loop motif. A mutation in FtsK causes a temperature sensitive block in cell division and it is involved in peptidoglycan synthesis or modification []. The SpoIIIE protein is implicated in intercellular chromosomal DNA transfer []. ; GO: 0000166 nucleotide binding, 0003677 DNA binding, 0005524 ATP binding, 0007049 cell cycle, 0007059 chromosome segregation, 0051301 cell division, 0016021 integral to membrane; PDB: 2IUS_E 2IUU_A 2IUT_A.
Probab=40.43 E-value=1.2e+02 Score=28.65 Aligned_cols=65 Identities=15% Similarity=0.216 Sum_probs=39.8
Q ss_pred EEeCCCCCCchhHHHHHHHHHHHh----CCceEEEEcCCCCCCCCCCC-CCCC---CCCcHHHHHHHHHHHHH
Q 008371 158 VVIPGLTSDSAAAYIKHLAFKMAG----HGWNVVVSNHRGLGGISLTS-DCFY---NGGWTEDLRRVIDYLHC 222 (568)
Q Consensus 158 VllHGl~G~s~~~y~~~l~~~l~~----~Gy~Vvv~D~RG~G~S~~~~-~~~~---~~~~~~Dl~~vi~~l~~ 222 (568)
+++-|-+|+..+.+++.++..++. .+.+++++|..|.+...... +... .....+++.++++++..
T Consensus 41 ~li~G~tgsGKS~~l~~ll~~l~~~~~p~~~~l~iiD~k~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 113 (205)
T PF01580_consen 41 LLIAGATGSGKSTLLRTLLLSLALTYSPDDVQLYIIDPKGSDLAPLADLPHVAAVAVATDPEEILRLLEELVE 113 (205)
T ss_dssp EEEE--TTSSHHHHHHHHHHHHHTT--TTTEEEEEE-TTSSCCGGGTT-TTBSS-S-B-SHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCccHHHHHHHHHHHHHhcCCccEEEEEcCCccccchhhhhhhhccccccccHHHHHHHHHHHHH
Confidence 555677787788888888888887 68999999999764433221 1111 12344666666666654
No 256
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=39.57 E-value=1.6e+02 Score=29.06 Aligned_cols=92 Identities=20% Similarity=0.161 Sum_probs=51.4
Q ss_pred CCcEEEEeCCCCC-CchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCC-CCCCCC-CCCcHHHHHHHH------HHHHHH
Q 008371 153 KNPIVVVIPGLTS-DSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISL-TSDCFY-NGGWTEDLRRVI------DYLHCQ 223 (568)
Q Consensus 153 ~~PvVVllHGl~G-~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~-~~~~~~-~~~~~~Dl~~vi------~~l~~~ 223 (568)
..|.|+|++--.. .....|++.+...+.+.|+.+..++...--.... ..+..+ ..|.+--+.+.+ +.|++.
T Consensus 30 ~~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~~d~~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~~l~~~ 109 (233)
T PRK05282 30 GRRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRVADPVAAIENAEAIFVGGGNTFQLLKQLYERGLLAPIREA 109 (233)
T ss_pred CCCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccchhhHHHHhcCCEEEECCccHHHHHHHHHHCCcHHHHHHH
Confidence 4577999996542 2346788888888989999988887652100000 011111 123332222111 223333
Q ss_pred CCCCcEEEEEecHHHHHHHHHH
Q 008371 224 YPEVPLYAVGTSIGANILVKYL 245 (568)
Q Consensus 224 ~~~~~i~lvG~SmGG~ial~ya 245 (568)
... -..++|.|.|++++....
T Consensus 110 ~~~-G~~~~G~SAGAii~~~~i 130 (233)
T PRK05282 110 VKN-GTPYIGWSAGANVAGPTI 130 (233)
T ss_pred HHC-CCEEEEECHHHHhhhccc
Confidence 222 378999999999976433
No 257
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=38.75 E-value=1.9e+02 Score=27.84 Aligned_cols=85 Identities=18% Similarity=0.236 Sum_probs=51.1
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHhC-CceEEEEcCCCCCCCCC-----CCCCCCCCCcHHHHHHHHHHHH-----
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGH-GWNVVVSNHRGLGGISL-----TSDCFYNGGWTEDLRRVIDYLH----- 221 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~~-Gy~Vvv~D~RG~G~S~~-----~~~~~~~~~~~~Dl~~vi~~l~----- 221 (568)
..+.|++++--.+ ....|...+...+.+. |+.+..++... .... ..+..+..+ .+...+++.++
T Consensus 30 ~~~~i~~IptAs~-~~~~~~~~~~~a~~~l~G~~~~~~~~~~--~~~~~~~l~~ad~I~l~G--G~~~~~~~~l~~~~l~ 104 (212)
T cd03146 30 ARPKVLFVPTASG-DRDEYTARFYAAFESLRGVEVSHLHLFD--TEDPLDALLEADVIYVGG--GNTFNLLAQWREHGLD 104 (212)
T ss_pred CCCeEEEECCCCC-CHHHHHHHHHHHHhhccCcEEEEEeccC--cccHHHHHhcCCEEEECC--chHHHHHHHHHHcCHH
Confidence 4567999997654 4557778888889999 99999988654 1110 111112111 12222222222
Q ss_pred ----HHCCCCcEEEEEecHHHHHHHH
Q 008371 222 ----CQYPEVPLYAVGTSIGANILVK 243 (568)
Q Consensus 222 ----~~~~~~~i~lvG~SmGG~ial~ 243 (568)
+.+ .....++|.|.|++++..
T Consensus 105 ~~l~~~~-~~g~~i~G~SAGa~i~~~ 129 (212)
T cd03146 105 AILKAAL-ERGVVYIGWSAGSNCWFP 129 (212)
T ss_pred HHHHHHH-HCCCEEEEECHhHHhhCC
Confidence 222 224789999999999765
No 258
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=36.60 E-value=2e+02 Score=29.90 Aligned_cols=93 Identities=17% Similarity=0.281 Sum_probs=58.3
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHH--------------HHHHhCCceEEEEcCC-CCCCCCCCCCCCCCCCcH---HHH
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLA--------------FKMAGHGWNVVVSNHR-GLGGISLTSDCFYNGGWT---EDL 213 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~--------------~~l~~~Gy~Vvv~D~R-G~G~S~~~~~~~~~~~~~---~Dl 213 (568)
..+|..+.+.|-.|.|...| -.+- -.+.. -.++-+|.| |.|.|-......|..... .|+
T Consensus 29 s~~pl~lwlqGgpGaSstG~-GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl 105 (414)
T KOG1283|consen 29 SERPLALWLQGGPGASSTGF-GNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDL 105 (414)
T ss_pred cCCCeeEEecCCCCCCCcCc-cchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceeeecCcccccccHHHHHHHH
Confidence 56899999999888776544 2121 11222 245555555 777765443344443333 466
Q ss_pred HHHHHHHHHHC---CCCcEEEEEecHHHHHHHHHHHh
Q 008371 214 RRVIDYLHCQY---PEVPLYAVGTSIGANILVKYLGE 247 (568)
Q Consensus 214 ~~vi~~l~~~~---~~~~i~lvG~SmGG~ial~ya~~ 247 (568)
.++++.+-..+ ...|++++--|+||-++.+++.+
T Consensus 106 ~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~ 142 (414)
T KOG1283|consen 106 VELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALE 142 (414)
T ss_pred HHHHHHHHhcCccccccceEEEEhhcccchhhhhhhh
Confidence 66666554443 36799999999999999887654
No 259
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=35.98 E-value=1.7e+02 Score=29.89 Aligned_cols=107 Identities=19% Similarity=0.084 Sum_probs=56.7
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCC---CCcHHHHHHHHHHHHHH---CC--
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYN---GGWTEDLRRVIDYLHCQ---YP-- 225 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~---~~~~~Dl~~vi~~l~~~---~~-- 225 (568)
+-+||..+-.+|--+..- -.-.+++..-...++++-| |..++...+. ..-.+-.+++++.+..+ .|
T Consensus 33 ~~lvV~~pTGtGWVdp~a-~~a~E~l~~GD~A~va~QY-----SylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~ 106 (289)
T PF10081_consen 33 KVLVVATPTGTGWVDPWA-VDALEYLYGGDVAIVAMQY-----SYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPED 106 (289)
T ss_pred ceEEEEcCCCCCccCHHH-HhHHHHHhCCCeEEEEecc-----ccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCcc
Confidence 334444443333333222 3455666655567777665 3333322221 11223344555555433 33
Q ss_pred -CCcEEEEEecHHHHHHHHHHHhcCC-CCCceEEEEEcCCCCh
Q 008371 226 -EVPLYAVGTSIGANILVKYLGENGV-NTPLVGAAAICSPWDL 266 (568)
Q Consensus 226 -~~~i~lvG~SmGG~ial~ya~~~~~-~~~I~a~V~is~p~d~ 266 (568)
..++++.|.|+|+.-+........+ ..++++++..++|...
T Consensus 107 ~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s 149 (289)
T PF10081_consen 107 RRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFS 149 (289)
T ss_pred cCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCC
Confidence 2369999999999887654322211 1269999999888755
No 260
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional
Probab=35.73 E-value=80 Score=29.71 Aligned_cols=43 Identities=12% Similarity=0.106 Sum_probs=35.1
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCC
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGG 196 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~ 196 (568)
.+.|+.+=|..|+-....++.++..+..+|++|-++-+-|||.
T Consensus 5 ~~~ii~ivG~sgsGKTTLi~~li~~l~~~g~~vg~Ik~~~~~~ 47 (173)
T PRK10751 5 MIPLLAIAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDM 47 (173)
T ss_pred CceEEEEECCCCChHHHHHHHHHHHHhhcCCeEEEEEEcCCCc
Confidence 4456666788888888888999999988899999888877764
No 261
>KOG1532 consensus GTPase XAB1, interacts with DNA repair protein XPA [Replication, recombination and repair]
Probab=35.39 E-value=46 Score=33.73 Aligned_cols=41 Identities=12% Similarity=0.336 Sum_probs=35.2
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcC
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~ 191 (568)
...+|++|++-|+.|+....|++.+..++.+++.+.+++|+
T Consensus 15 ~~~~p~~ilVvGMAGSGKTTF~QrL~~hl~~~~~ppYviNL 55 (366)
T KOG1532|consen 15 AIQRPVIILVVGMAGSGKTTFMQRLNSHLHAKKTPPYVINL 55 (366)
T ss_pred cccCCcEEEEEecCCCCchhHHHHHHHHHhhccCCCeEEeC
Confidence 45678899999999988899999999999988877777775
No 262
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB. This molybdenum cofactor biosynthesis enzyme is similar to the urease accessory protein UreG and to the hydrogenase accessory protein HypB, both GTP hydrolases involved in loading nickel into the metallocenters of their respective target enzymes.
Probab=35.23 E-value=63 Score=29.62 Aligned_cols=38 Identities=18% Similarity=0.310 Sum_probs=31.0
Q ss_pred EEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCC
Q 008371 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (568)
Q Consensus 158 VllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G 195 (568)
+.+-|..|+.....+..++..+.++|++|.++.+-+++
T Consensus 2 i~i~G~~gsGKTtl~~~l~~~l~~~G~~V~viK~~~~~ 39 (155)
T TIGR00176 2 LQIVGPKNSGKTTLIERLVKALKARGYRVATIKHDHHD 39 (155)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCeEEEEeccccc
Confidence 45558878778888889999999999999999976554
No 263
>PF13396 PLDc_N: Phospholipase_D-nuclease N-terminal
Probab=35.22 E-value=11 Score=26.85 Aligned_cols=26 Identities=35% Similarity=0.809 Sum_probs=18.8
Q ss_pred CcchhhhHHHHhhccccchhHHHHHHHHhh
Q 008371 527 RISIWLLVCIAITTTWPLVGSALILFLRRK 556 (568)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 556 (568)
.+-.|+++-+ --|.+|.+++++++||
T Consensus 21 ~k~~W~~~i~----~~P~iG~i~Yl~~gr~ 46 (46)
T PF13396_consen 21 SKILWLIVIL----FFPIIGPILYLIFGRK 46 (46)
T ss_pred hhhHHHHHHH----HHHHHHHhheEEEeCC
Confidence 4445655433 3699999999999886
No 264
>PRK03846 adenylylsulfate kinase; Provisional
Probab=35.18 E-value=2.1e+02 Score=27.06 Aligned_cols=40 Identities=13% Similarity=0.169 Sum_probs=32.2
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcC
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~ 191 (568)
..+|.+|.+.|..|+..+...+.+...+...|+.++.+|-
T Consensus 21 ~~~~~~i~i~G~~GsGKSTla~~l~~~l~~~~~~~~~ld~ 60 (198)
T PRK03846 21 GHKGVVLWFTGLSGSGKSTVAGALEEALHELGVSTYLLDG 60 (198)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHhCCCCEEEEcC
Confidence 4578899999998888887777788888777888888863
No 265
>PRK07933 thymidylate kinase; Validated
Probab=34.46 E-value=83 Score=30.45 Aligned_cols=42 Identities=14% Similarity=0.234 Sum_probs=35.7
Q ss_pred EEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCC
Q 008371 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGIS 198 (568)
Q Consensus 157 VVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~ 198 (568)
+|.+=|.-|+..+.-.+.++++|.++|+.|+....+++|++.
T Consensus 2 ~IviEG~dGsGKST~~~~L~~~L~~~g~~v~~~~~P~~~~~~ 43 (213)
T PRK07933 2 LIAIEGVDGAGKRTLTEALRAALEARGRSVATLAFPRYGRSV 43 (213)
T ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHCCCeEEEEecCCCCCCC
Confidence 466778888888888899999999999999999999877543
No 266
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=34.00 E-value=68 Score=25.45 Aligned_cols=32 Identities=22% Similarity=0.292 Sum_probs=25.4
Q ss_pred EeCCCCCCchhHHHHHHHHHHHhCCceEEEEc
Q 008371 159 VIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (568)
Q Consensus 159 llHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D 190 (568)
++-|..|...+.....++..+++.|++|+++|
T Consensus 3 ~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 3 VVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 34455566677777889999999999999999
No 267
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=33.65 E-value=23 Score=34.97 Aligned_cols=40 Identities=15% Similarity=0.273 Sum_probs=32.2
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCC
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~R 192 (568)
+.|+||++.|+.|+....-++.+...+-.+|++|.++.-+
T Consensus 29 ~~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 29 GIPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HHEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CCcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 4679999999988877888888888888899999999754
No 268
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=33.26 E-value=65 Score=34.56 Aligned_cols=63 Identities=14% Similarity=0.132 Sum_probs=41.6
Q ss_pred CCccceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccccccC-cccHHHHHHHHHH
Q 008371 348 NVSVPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEGITAK-SLWWVRAVNVFLD 413 (568)
Q Consensus 348 ~I~vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg~~~~-~~w~~~~i~eFL~ 413 (568)
+-.--+|+|+|++||..... ...-....+..+.+.|+|.|.+-+.++.+. +......|.+|..
T Consensus 349 ~~~~rmlFVYG~nDPW~A~~---f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~WaG 412 (448)
T PF05576_consen 349 NNGPRMLFVYGENDPWSAEP---FRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRWAG 412 (448)
T ss_pred hCCCeEEEEeCCCCCcccCc---cccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHcC
Confidence 33456999999999986432 212234567888889999999887765332 2344455566654
No 269
>COG5192 BMS1 GTP-binding protein required for 40S ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=33.10 E-value=4.2e+02 Score=29.79 Aligned_cols=100 Identities=17% Similarity=0.212 Sum_probs=63.6
Q ss_pred CCCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCC-CCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcE
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGL-GGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPL 229 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~-G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i 229 (568)
+.+.|.|+-+-|=+|+..+..+++++..+.+.-. -+.+|- --+.+...+.....+.+|+.++|+-.+.. .+
T Consensus 65 d~PPPfIvavvGPpGtGKsTLirSlVrr~tk~ti----~~i~GPiTvvsgK~RRiTflEcp~Dl~~miDvaKIa----DL 136 (1077)
T COG5192 65 DLPPPFIVAVVGPPGTGKSTLIRSLVRRFTKQTI----DEIRGPITVVSGKTRRITFLECPSDLHQMIDVAKIA----DL 136 (1077)
T ss_pred cCCCCeEEEeecCCCCChhHHHHHHHHHHHHhhh----hccCCceEEeecceeEEEEEeChHHHHHHHhHHHhh----he
Confidence 4566777778888888888889999998876321 123331 01111223333334558999999876643 22
Q ss_pred E------EEEecHHHHHHHHHHHhcCCCCCceEEEE
Q 008371 230 Y------AVGTSIGANILVKYLGENGVNTPLVGAAA 259 (568)
Q Consensus 230 ~------lvG~SmGG~ial~ya~~~~~~~~I~a~V~ 259 (568)
+ -+|+-|-.+--++.+..++-. +|-|++.
T Consensus 137 VlLlIdgnfGfEMETmEFLnil~~HGmP-rvlgV~T 171 (1077)
T COG5192 137 VLLLIDGNFGFEMETMEFLNILISHGMP-RVLGVVT 171 (1077)
T ss_pred eEEEeccccCceehHHHHHHHHhhcCCC-ceEEEEe
Confidence 2 258899999888888888742 5666654
No 270
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=32.40 E-value=2.5e+02 Score=28.32 Aligned_cols=38 Identities=29% Similarity=0.397 Sum_probs=27.0
Q ss_pred EEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCC
Q 008371 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (568)
Q Consensus 156 vVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG 193 (568)
++++++|+..+........+++.|.++|+.|.++...+
T Consensus 2 il~~~~~~~~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 39 (360)
T cd04951 2 ILYVITGLGLGGAEKQVVDLADQFVAKGHQVAIISLTG 39 (360)
T ss_pred eEEEecCCCCCCHHHHHHHHHHhcccCCceEEEEEEeC
Confidence 46666765423345666789999999999998887554
No 271
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=31.75 E-value=3 Score=41.48 Aligned_cols=95 Identities=23% Similarity=0.204 Sum_probs=53.5
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcC----------CCCCCCCCCCCCCCCCCcHHHHHHHHH---
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH----------RGLGGISLTSDCFYNGGWTEDLRRVID--- 218 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~----------RG~G~S~~~~~~~~~~~~~~Dl~~vi~--- 218 (568)
...|.+++.||+++.... . ...+..++..++.+...+. +|++.+..............+...++.
T Consensus 47 ~~~p~v~~~h~~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (299)
T COG1073 47 KKLPAVVFLHGFGSSKEQ-S-LGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAAVLLLLSEGVLDKDY 124 (299)
T ss_pred ccCceEEeccCccccccC-c-chHHHHhhhceeEEeeeccccccccccccccccCccccccccchhheeeeccccccHHH
Confidence 578899999999765443 2 2377888888998887764 333332221111111000011111111
Q ss_pred HHHHHCCCCcEEEEEecHHHHHHHHHHHhcC
Q 008371 219 YLHCQYPEVPLYAVGTSIGANILVKYLGENG 249 (568)
Q Consensus 219 ~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~ 249 (568)
...... ..+....|.++|+..+..++...+
T Consensus 125 ~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~ 154 (299)
T COG1073 125 RLLGAS-LGPRILAGLSLGGPSAGALLAWGP 154 (299)
T ss_pred HHHhhh-cCcceEEEEEeeccchHHHhhcch
Confidence 111111 247889999999999888887765
No 272
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=31.67 E-value=2.4e+02 Score=29.39 Aligned_cols=100 Identities=24% Similarity=0.189 Sum_probs=56.0
Q ss_pred EEeCCCCCCchhHHHHHHHHHHHhCC--ceEEEEc--CCCCCCCC--------CCCC-CCCCCCcHHHHHHHHHHHHHHC
Q 008371 158 VVIPGLTSDSAAAYIKHLAFKMAGHG--WNVVVSN--HRGLGGIS--------LTSD-CFYNGGWTEDLRRVIDYLHCQY 224 (568)
Q Consensus 158 VllHGl~G~s~~~y~~~l~~~l~~~G--y~Vvv~D--~RG~G~S~--------~~~~-~~~~~~~~~Dl~~vi~~l~~~~ 224 (568)
|+++|+ | |....+..+++.+.... +.|+++| .++..--+ .... ........+-+..+++++....
T Consensus 57 lL~YG~-G-SKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~ 134 (326)
T PF04084_consen 57 LLFYGY-G-SKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRP 134 (326)
T ss_pred EEEEec-C-hHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccC
Confidence 778898 4 56677788888877763 6777777 22221100 0001 1111122344555666666554
Q ss_pred CCCcEEEEEecHHHHH--------HHHHHHhcCCCCCceEEEEEcC
Q 008371 225 PEVPLYAVGTSIGANI--------LVKYLGENGVNTPLVGAAAICS 262 (568)
Q Consensus 225 ~~~~i~lvG~SmGG~i--------al~ya~~~~~~~~I~a~V~is~ 262 (568)
+..+++++=|++=|-. ++..++..|. |.-+++++.
T Consensus 135 ~~~~l~lvIHnIDg~~LR~~~~Q~~La~LA~~p~---I~lIASiDh 177 (326)
T PF04084_consen 135 SPPPLYLVIHNIDGPSLRNEKAQSLLAQLASIPN---IHLIASIDH 177 (326)
T ss_pred CCCceEEEEECCCChhhcChHHHHHHHHHHcCCC---eEEEEeccC
Confidence 3668999999985554 3334444443 666666653
No 273
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=31.29 E-value=1.6e+02 Score=26.78 Aligned_cols=75 Identities=16% Similarity=0.201 Sum_probs=43.7
Q ss_pred EEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEe
Q 008371 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (568)
Q Consensus 156 vVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~ 234 (568)
.-++-.|+.|.........+...+......++++- -|..... .. .....+.+.+.++++.+++.+|..++++++.
T Consensus 23 ~~v~N~Gi~G~~~~~~~~~~~~~~~~~~p~~vvi~-~G~ND~~--~~-~~~~~~~~~~~~lv~~i~~~~~~~~iil~~~ 97 (171)
T cd04502 23 LPVVNRGFGGSTLADCLHYFDRLVLPYQPRRVVLY-AGDNDLA--SG-RTPEEVLRDFRELVNRIRAKLPDTPIAIISI 97 (171)
T ss_pred CceeecCcccchHHHHHHHHHhhhccCCCCEEEEE-EecCccc--CC-CCHHHHHHHHHHHHHHHHHHCCCCcEEEEEe
Confidence 34788899887665554444444444455555552 2222211 00 0112355788889998988887777777763
No 274
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=31.21 E-value=73 Score=32.79 Aligned_cols=86 Identities=15% Similarity=0.077 Sum_probs=47.8
Q ss_pred HHHHHHHHhCCceEEEEcCCCCCCCCCCCC--CCCCCCcHHHHHHHHHHHHHHCCCCc-----EEEEEecH---------
Q 008371 173 KHLAFKMAGHGWNVVVSNHRGLGGISLTSD--CFYNGGWTEDLRRVIDYLHCQYPEVP-----LYAVGTSI--------- 236 (568)
Q Consensus 173 ~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~--~~~~~~~~~Dl~~vi~~l~~~~~~~~-----i~lvG~Sm--------- 236 (568)
.+.+..|.+.||.|+++|..-.|....-.. ..+..+...|-..+-+.+.+..+..- ...||-|+
T Consensus 14 SHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~~VgESv~~Pl~Yy~N 93 (329)
T COG1087 14 SHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEENKIDAVVHFAASISVGESVQNPLKYYDN 93 (329)
T ss_pred HHHHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhcCCCEEEECccccccchhhhCHHHHHhh
Confidence 367788889999999999988776543222 12334445554444444444333222 34567774
Q ss_pred ---HHHHHHHHHHhcCCCCCceEEEEEcC
Q 008371 237 ---GANILVKYLGENGVNTPLVGAAAICS 262 (568)
Q Consensus 237 ---GG~ial~ya~~~~~~~~I~a~V~is~ 262 (568)
|...++..+.+. .|+.+|.-|+
T Consensus 94 Nv~gTl~Ll~am~~~----gv~~~vFSSt 118 (329)
T COG1087 94 NVVGTLNLIEAMLQT----GVKKFIFSST 118 (329)
T ss_pred chHhHHHHHHHHHHh----CCCEEEEecc
Confidence 333344444444 3666665443
No 275
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=30.97 E-value=2.3e+02 Score=25.67 Aligned_cols=75 Identities=16% Similarity=0.266 Sum_probs=45.4
Q ss_pred cEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008371 155 PIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (568)
Q Consensus 155 PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG 233 (568)
+.-++-.|.+|.........+-..+.....+++++- -|...... .. ....+.+.+..+++.+++.+|..++++++
T Consensus 23 ~~~v~n~g~~G~t~~~~~~~~~~~~~~~~pd~v~i~-~G~ND~~~--~~-~~~~~~~~~~~l~~~~~~~~p~~~vi~~~ 97 (174)
T cd01841 23 GKTVNNLGIAGISSRQYLEHIEPQLIQKNPSKVFLF-LGTNDIGK--EV-SSNQFIKWYRDIIEQIREEFPNTKIYLLS 97 (174)
T ss_pred CCeEEecccccccHHHHHHHHHHHHHhcCCCEEEEE-eccccCCC--CC-CHHHHHHHHHHHHHHHHHHCCCCEEEEEe
Confidence 445677888887766665555455656666666664 23322211 11 11335578888888888877766666665
No 276
>CHL00175 minD septum-site determining protein; Validated
Probab=30.88 E-value=1.1e+02 Score=30.84 Aligned_cols=39 Identities=18% Similarity=0.323 Sum_probs=29.9
Q ss_pred CcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCC
Q 008371 154 NPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (568)
Q Consensus 154 ~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~R 192 (568)
..+|.+..|=+|...+.....++..|++.|++|+++|.=
T Consensus 15 ~~vi~v~s~KGGvGKTt~a~nLA~~La~~g~~vlliD~D 53 (281)
T CHL00175 15 SRIIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDAD 53 (281)
T ss_pred ceEEEEEcCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 346677776666556666678999999999999999874
No 277
>COG1763 MobB Molybdopterin-guanine dinucleotide biosynthesis protein [Coenzyme metabolism]
Probab=30.47 E-value=84 Score=29.21 Aligned_cols=40 Identities=20% Similarity=0.342 Sum_probs=35.1
Q ss_pred EEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCC
Q 008371 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (568)
Q Consensus 156 vVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G 195 (568)
.|+=+=|+.++.....+..+++.|.++||+|.++-+-+|+
T Consensus 3 ~Il~ivG~k~SGKTTLie~lv~~L~~~G~rVa~iKH~hh~ 42 (161)
T COG1763 3 KILGIVGYKNSGKTTLIEKLVRKLKARGYRVATVKHAHHD 42 (161)
T ss_pred cEEEEEecCCCChhhHHHHHHHHHHhCCcEEEEEEecCCC
Confidence 3666778877777888899999999999999999999998
No 278
>TIGR02069 cyanophycinase cyanophycinase. This model describes both cytosolic and extracellular cyanophycinases. The former are part of a system in many Cyanobacteria and a few other species of generating and later utilizing a storage polymer for nitrogen, carbon, and energy, called cyanophycin. The latter are found in species such as Pseudomonas anguilliseptica that can use external cyanophycin. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine.
Probab=30.29 E-value=1.8e+02 Score=29.09 Aligned_cols=92 Identities=18% Similarity=0.258 Sum_probs=49.5
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCce-EEEEcCCCCCCC--CC------CCC-CCCCCCcHHHHH------H
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWN-VVVSNHRGLGGI--SL------TSD-CFYNGGWTEDLR------R 215 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~-Vvv~D~RG~G~S--~~------~~~-~~~~~~~~~Dl~------~ 215 (568)
...|-|++++--.+ ....|.+...+.+.+.|+. |-.++.+..... +. ..+ -+...+.+.-+. .
T Consensus 26 ~~~~rI~~iptAS~-~~~~~~~~~~~~~~~lG~~~v~~l~i~~r~~a~~~~~~~~l~~ad~I~~~GGnq~~l~~~l~~t~ 104 (250)
T TIGR02069 26 GEDAIIVIITSASE-EPREVGERYITIFSRLGVKEVKILDVREREDASDENAIALLSNATGIFFTGGDQLRITSLLGDTP 104 (250)
T ss_pred CCCceEEEEeCCCC-ChHHHHHHHHHHHHHcCCceeEEEecCChHHccCHHHHHHHhhCCEEEEeCCCHHHHHHHHcCCc
Confidence 34567899996543 4456677788888888984 666666432111 10 001 111223332222 1
Q ss_pred HHHHHHHHCCCCcEEEEEecHHHHHHHHHH
Q 008371 216 VIDYLHCQYPEVPLYAVGTSIGANILVKYL 245 (568)
Q Consensus 216 vi~~l~~~~~~~~i~lvG~SmGG~ial~ya 245 (568)
+.+.|++.+.. -.+++|.|.|++++....
T Consensus 105 l~~~l~~~~~~-G~vi~G~SAGA~i~~~~~ 133 (250)
T TIGR02069 105 LLDRLRKRVHE-GIILGGTSAGAAVMSDTM 133 (250)
T ss_pred HHHHHHHHHHc-CCeEEEccHHHHhcccce
Confidence 11233333322 378999999999875443
No 279
>PF01656 CbiA: CobQ/CobB/MinD/ParA nucleotide binding domain; InterPro: IPR002586 This entry consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from Salmonella typhimurium []., and CobQ from Rhodobacter capsulatus []. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria [].; PDB: 3K9G_A 3K9H_B 3EZ9_B 3EZF_A 3EZ2_B 3EZ6_A 3EZ7_A 1G3Q_A 1G3R_A 1DTS_A ....
Probab=30.27 E-value=71 Score=29.63 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=23.6
Q ss_pred EeCCCCCCchhHHHHHHHHHHHhCCceEEEEcC
Q 008371 159 VIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (568)
Q Consensus 159 llHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~ 191 (568)
+..+=+|...+.....++..++++|++|+++|.
T Consensus 3 v~~~kGG~GKTt~a~~la~~la~~g~~VlliD~ 35 (195)
T PF01656_consen 3 VTSGKGGVGKTTIAANLAQALARKGKKVLLIDL 35 (195)
T ss_dssp EEESSTTSSHHHHHHHHHHHHHHTTS-EEEEEE
T ss_pred EEcCCCCccHHHHHHHHHhcccccccccccccc
Confidence 334433444556666899999999999999998
No 280
>TIGR00455 apsK adenylylsulfate kinase (apsK). Important residue (active site in E.coli) is residue 100 of the seed alignment.
Probab=30.23 E-value=4.4e+02 Score=24.31 Aligned_cols=40 Identities=20% Similarity=0.374 Sum_probs=32.4
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcC
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~ 191 (568)
...+.++++.|..|+..+...+.+...+...|+.++.+|-
T Consensus 15 ~~~~~~i~i~G~~GsGKstla~~l~~~l~~~~~~~~~l~~ 54 (184)
T TIGR00455 15 GHRGVVIWLTGLSGSGKSTIANALEKKLESKGYRVYVLDG 54 (184)
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHHHHcCCcEEEECC
Confidence 3567899999999988888888888888778888877763
No 281
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=29.62 E-value=40 Score=34.22 Aligned_cols=82 Identities=16% Similarity=0.196 Sum_probs=43.8
Q ss_pred EEeCCCCCCchhHHHHHHHHHHHhCCc-------eEEEEcCCCCCCCC---CCCC-CCCCC----CcHHHHHHHHHHHHH
Q 008371 158 VVIPGLTSDSAAAYIKHLAFKMAGHGW-------NVVVSNHRGLGGIS---LTSD-CFYNG----GWTEDLRRVIDYLHC 222 (568)
Q Consensus 158 VllHGl~G~s~~~y~~~l~~~l~~~Gy-------~Vvv~D~RG~G~S~---~~~~-~~~~~----~~~~Dl~~vi~~l~~ 222 (568)
|++.|. |+....-.+.+...+.+.|. +++++|..|.=..+ .... ..|.. ....++.++++.++
T Consensus 28 iv~~GA-GsAg~gia~ll~~~~~~~G~~~eeA~~~i~~vD~~Gll~~~r~~l~~~~~~~a~~~~~~~~~~L~e~i~~v~- 105 (279)
T cd05312 28 ILFLGA-GSAGIGIADLIVSAMVREGLSEEEARKKIWLVDSKGLLTKDRKDLTPFKKPFARKDEEKEGKSLLEVVKAVK- 105 (279)
T ss_pred EEEECc-CHHHHHHHHHHHHHHHHcCCChhhccCeEEEEcCCCeEeCCCCcchHHHHHHHhhcCcccCCCHHHHHHhcC-
Confidence 555665 43333344556666666687 89999999932221 1100 00100 01135555555543
Q ss_pred HCCCCcEEEEEecH-HHHHHHHHHH
Q 008371 223 QYPEVPLYAVGTSI-GANILVKYLG 246 (568)
Q Consensus 223 ~~~~~~i~lvG~Sm-GG~ial~ya~ 246 (568)
+-+++|.|- ||.+.-.++.
T Consensus 106 -----ptvlIG~S~~~g~ft~evv~ 125 (279)
T cd05312 106 -----PTVLIGLSGVGGAFTEEVVR 125 (279)
T ss_pred -----CCEEEEeCCCCCCCCHHHHH
Confidence 569999995 6765444443
No 282
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=29.30 E-value=5.5e+02 Score=25.09 Aligned_cols=41 Identities=15% Similarity=0.165 Sum_probs=22.4
Q ss_pred CCcEEEEeCCCC-CCch-hHHHHHHHHHHHhCCceEEEEcCCC
Q 008371 153 KNPIVVVIPGLT-SDSA-AAYIKHLAFKMAGHGWNVVVSNHRG 193 (568)
Q Consensus 153 ~~PvVVllHGl~-G~s~-~~y~~~l~~~l~~~Gy~Vvv~D~RG 193 (568)
..+-|+.+-|-. -+|. ....+.+.+.+.++|..+-.+|++.
T Consensus 25 ~~~kI~~I~GSlR~~S~n~~la~~~~~~~~~~g~~v~~idl~~ 67 (219)
T TIGR02690 25 HIPRILLLYGSLRERSYSRLLAEEAARLLGCEGRETRIFDPPG 67 (219)
T ss_pred CCCEEEEEECCCCCcchHHHHHHHHHHHHhhcCCEEEEeCccc
Confidence 345566666632 1122 2223344444554689999998764
No 283
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=29.05 E-value=82 Score=32.44 Aligned_cols=32 Identities=22% Similarity=0.412 Sum_probs=21.4
Q ss_pred CCCCcEEEEeCCCCCCchhHHHH-HHHHHHHhCC
Q 008371 151 CEKNPIVVVIPGLTSDSAAAYIK-HLAFKMAGHG 183 (568)
Q Consensus 151 ~~~~PvVVllHGl~G~s~~~y~~-~l~~~l~~~G 183 (568)
.+.+|.++=+||++|... +|+. -+++.+...|
T Consensus 106 ~p~KPLvLSfHG~tGTGK-N~Va~iiA~n~~~~G 138 (344)
T KOG2170|consen 106 NPRKPLVLSFHGWTGTGK-NYVAEIIAENLYRGG 138 (344)
T ss_pred CCCCCeEEEecCCCCCch-hHHHHHHHHHHHhcc
Confidence 468999999999998654 5643 3444444433
No 284
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=28.29 E-value=1.5e+02 Score=27.73 Aligned_cols=54 Identities=13% Similarity=0.167 Sum_probs=41.0
Q ss_pred HHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEecHH
Q 008371 178 KMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGTSIG 237 (568)
Q Consensus 178 ~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~SmG 237 (568)
.|.+.|++.+++|.=.+=-. .+......++.+.++.+++.++..++.++--|.|
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~------~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTP------PYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCCCCC------CCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 37889999999998654211 1223344789999999999988778999999986
No 285
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=28.09 E-value=86 Score=33.82 Aligned_cols=42 Identities=10% Similarity=0.038 Sum_probs=27.3
Q ss_pred cceEEEEeCCCCCCCCCCcchHHHhcCCCEEEEEeCCCCccccccc
Q 008371 351 VPLLCISTLDDPVCTREAIPWDECRANEKIILATTRHGGHLAFYEG 396 (568)
Q Consensus 351 vPvLiI~G~dDpivp~~~~~~~~~~~~~~~~l~~~~~GGH~~f~eg 396 (568)
.-+++.+|..||...... ....+..+..+++++|+|+.-+.+
T Consensus 377 tnviFtNG~~DPW~~lgv----~~~~~~~~~~~~I~g~~Hc~Dl~~ 418 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGV----TSDSSDSVPAIVIPGGAHCSDLYP 418 (434)
T ss_dssp -SEEEEEETT-CCGGGS------S-SSSSEEEEEETT--TTGGGS-
T ss_pred CeEEeeCCCCCCcccccC----CCCCCCCcccEEECCCeeeccccC
Confidence 579999999999876542 223456777889999999986654
No 286
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=27.99 E-value=50 Score=35.06 Aligned_cols=60 Identities=15% Similarity=0.161 Sum_probs=35.5
Q ss_pred ccceEEEEeCCCCCCCCCCcchHH-------------------------HhcCCCEEEEEeCCCCccccccccccCcccH
Q 008371 350 SVPLLCISTLDDPVCTREAIPWDE-------------------------CRANEKIILATTRHGGHLAFYEGITAKSLWW 404 (568)
Q Consensus 350 ~vPvLiI~G~dDpivp~~~~~~~~-------------------------~~~~~~~~l~~~~~GGH~~f~eg~~~~~~w~ 404 (568)
.+++|+.+|..|-+|+.-...... .+...+..++++.++||+...+ .|...
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~d----qP~~a 405 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQD----QPEAA 405 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHH----SHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhh----CHHHH
Confidence 389999999999999842111100 0122568899999999998776 34345
Q ss_pred HHHHHHHHH
Q 008371 405 VRAVNVFLD 413 (568)
Q Consensus 405 ~~~i~eFL~ 413 (568)
.+.+.+|++
T Consensus 406 ~~m~~~fl~ 414 (415)
T PF00450_consen 406 LQMFRRFLK 414 (415)
T ss_dssp HHHHHHHHC
T ss_pred HHHHHHHhc
Confidence 566666653
No 287
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=27.52 E-value=1.4e+02 Score=32.81 Aligned_cols=105 Identities=21% Similarity=0.154 Sum_probs=56.7
Q ss_pred CcEEEEeCCC---CCCch-hHHHHHHHHHHHhC-CceEEEEcCCC--CCCCCC--CCCCCCCCCcHHHHHHHHHHHHHH-
Q 008371 154 NPIVVVIPGL---TSDSA-AAYIKHLAFKMAGH-GWNVVVSNHRG--LGGISL--TSDCFYNGGWTEDLRRVIDYLHCQ- 223 (568)
Q Consensus 154 ~PvVVllHGl---~G~s~-~~y~~~l~~~l~~~-Gy~Vvv~D~RG--~G~S~~--~~~~~~~~~~~~Dl~~vi~~l~~~- 223 (568)
..++|.+-|. .|++. ..| =.+.|+.. .--|+.+|+|= +|---. .++...+-|. -|..-++.|+++.
T Consensus 135 ~tVlVWiyGGGF~sGt~SLdvY---dGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmGl-~DQqLAl~WV~~Ni 210 (601)
T KOG4389|consen 135 LTVLVWIYGGGFYSGTPSLDVY---DGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMGL-LDQQLALQWVQENI 210 (601)
T ss_pred ceEEEEEEcCccccCCcceeee---ccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccch-HHHHHHHHHHHHhH
Confidence 3367777762 22221 223 22334443 35677888883 332221 1111222222 5777888888875
Q ss_pred --CC--CCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEEEcC
Q 008371 224 --YP--EVPLYAVGTSIGANILVKYLGENGVNTPLVGAAAICS 262 (568)
Q Consensus 224 --~~--~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~is~ 262 (568)
++ ..++.++|-|.|+.-+..-+-.-+....++.+|+-++
T Consensus 211 ~aFGGnp~~vTLFGESAGaASv~aHLlsP~S~glF~raIlQSG 253 (601)
T KOG4389|consen 211 AAFGGNPSRVTLFGESAGAASVVAHLLSPGSRGLFHRAILQSG 253 (601)
T ss_pred HHhCCCcceEEEeccccchhhhhheecCCCchhhHHHHHhhcC
Confidence 22 3579999999999876643333333223555555443
No 288
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=27.27 E-value=1.1e+02 Score=33.34 Aligned_cols=38 Identities=16% Similarity=0.275 Sum_probs=32.9
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEc
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D 190 (568)
.+|.+|++-|..|.........++.++.++|++|.+++
T Consensus 98 ~~~~vi~lvG~~GvGKTTtaaKLA~~l~~~G~kV~lV~ 135 (429)
T TIGR01425 98 GKQNVIMFVGLQGSGKTTTCTKLAYYYQRKGFKPCLVC 135 (429)
T ss_pred CCCeEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEc
Confidence 45789999999998888788889999999999999886
No 289
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=27.13 E-value=1.2e+02 Score=27.95 Aligned_cols=45 Identities=18% Similarity=0.309 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHCCCCcEEEEEecHHHHHHHHHHHhcCCCCCceEEEE
Q 008371 211 EDLRRVIDYLHCQYPEVPLYAVGTSIGANILVKYLGENGVNTPLVGAAA 259 (568)
Q Consensus 211 ~Dl~~vi~~l~~~~~~~~i~lvG~SmGG~ial~ya~~~~~~~~I~a~V~ 259 (568)
+++.+.++.++.+ +.+++++|-|..|.+.+++++..++ .|..++=
T Consensus 55 ~~l~~~L~~~~~~--gk~I~~yGA~~kg~tlln~~g~~~~--~I~~vvD 99 (160)
T PF08484_consen 55 AELREFLEKLKAE--GKRIAGYGAGAKGNTLLNYFGLDND--LIDYVVD 99 (160)
T ss_dssp HHHHHHHHHHHHT--T--EEEE---SHHHHHHHHHT--TT--TS--EEE
T ss_pred HHHHHHHHHHHHc--CCEEEEECcchHHHHHHHHhCCCcc--eeEEEEe
Confidence 4555555555554 4689999999999999999988666 4666553
No 290
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=26.54 E-value=66 Score=31.35 Aligned_cols=35 Identities=17% Similarity=0.452 Sum_probs=31.1
Q ss_pred EEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcC
Q 008371 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (568)
Q Consensus 157 VVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~ 191 (568)
+|++.|++|+....+.++++..|.+++++|+...-
T Consensus 3 LiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 3 LIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred eEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 68889999988889999999999999999987754
No 291
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=26.16 E-value=1.1e+02 Score=31.63 Aligned_cols=59 Identities=22% Similarity=0.048 Sum_probs=38.0
Q ss_pred ccceEEEEeCCCCCCCCCCcchHHH-----------------------hcCC-CEEEEEeCCCCccccccccccCcccHH
Q 008371 350 SVPLLCISTLDDPVCTREAIPWDEC-----------------------RANE-KIILATTRHGGHLAFYEGITAKSLWWV 405 (568)
Q Consensus 350 ~vPvLiI~G~dDpivp~~~~~~~~~-----------------------~~~~-~~~l~~~~~GGH~~f~eg~~~~~~w~~ 405 (568)
.+++|+.+|..|-+|+.-....... +... +..++++.++||+.. . .|....
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~----qP~~al 307 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-Y----RPNETF 307 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-c----CHHHHH
Confidence 4799999999999988632111000 1112 388889999999984 2 243455
Q ss_pred HHHHHHHH
Q 008371 406 RAVNVFLD 413 (568)
Q Consensus 406 ~~i~eFL~ 413 (568)
+.+..|+.
T Consensus 308 ~m~~~fi~ 315 (319)
T PLN02213 308 IMFQRWIS 315 (319)
T ss_pred HHHHHHHc
Confidence 66677764
No 292
>PRK06696 uridine kinase; Validated
Probab=25.61 E-value=1.2e+02 Score=29.30 Aligned_cols=39 Identities=23% Similarity=0.417 Sum_probs=32.4
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEc
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D 190 (568)
..+|.||.+-|..|+..+...+.+++.|.+.|..++.+.
T Consensus 19 ~~~~~iI~I~G~sgsGKSTlA~~L~~~l~~~g~~v~~~~ 57 (223)
T PRK06696 19 LTRPLRVAIDGITASGKTTFADELAEEIKKRGRPVIRAS 57 (223)
T ss_pred CCCceEEEEECCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 457899999999998888888888888887788887744
No 293
>PRK13230 nitrogenase reductase-like protein; Reviewed
Probab=24.74 E-value=1.2e+02 Score=30.34 Aligned_cols=41 Identities=15% Similarity=0.096 Sum_probs=30.4
Q ss_pred EEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCC
Q 008371 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGI 197 (568)
Q Consensus 156 vVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S 197 (568)
++.++ |=+|.........++..|+++|++|+++|.=-.|..
T Consensus 3 ~i~~~-gKGGVGKTT~a~nLA~~La~~G~rVLliD~Dpq~n~ 43 (279)
T PRK13230 3 KFCFY-GKGGIGKSTTVCNIAAALAESGKKVLVVGCDPKADC 43 (279)
T ss_pred EEEEE-CCCCCcHHHHHHHHHHHHHhCCCEEEEEeeCCcccc
Confidence 35555 654555666667899999999999999998665543
No 294
>TIGR03063 srtB_target sortase B cell surface sorting signal. Two different classes of sorting signal, both analogous to the sortase A signal LPXTG, may be recognized by the sortase SrtB. These are given as NXZTN and NPKXZ. Proteins sorted by this class of sortase are less common than the sortase A and LPXTG system. This model describes a number of cell surface protein C-terminal regions from Gram-positive bacteria that appear to be sortase B (SrtB) sorting signals.
Probab=24.70 E-value=37 Score=22.01 Aligned_cols=11 Identities=36% Similarity=0.715 Sum_probs=7.6
Q ss_pred chhHHHHHHHH
Q 008371 544 LVGSALILFLR 554 (568)
Q Consensus 544 ~~~~~~~~~~~ 554 (568)
++||+++++.|
T Consensus 17 ~~~s~~~Li~k 27 (29)
T TIGR03063 17 FLGSGLFLIRK 27 (29)
T ss_pred HHHHHHHHhhc
Confidence 48888877643
No 295
>TIGR03371 cellulose_yhjQ cellulose synthase operon protein YhjQ. Members of this family are the YhjQ protein, found immediately upsteam of bacterial cellulose synthase (bcs) genes in a broad range of bacteria, including both copies of the bcs locus in Klebsiella pneumoniae. In several species it is seen clearly as part of the bcs operon. It is identified as a probable component of the bacterial cellulose metabolic process not only by gene location, but also by partial phylogenetic profiling, or Haft-Selengut algorithm (PubMed:16930487), based on a bacterial cellulose biosynthesis genome property profile. Cellulose plays an important role in biofilm formation and structural integrity in some bacteria. Mutants in yhjQ in Escherichia coli, show altered morphology an growth, but the function of YhjQ has not yet been determined.
Probab=24.01 E-value=1.4e+02 Score=29.13 Aligned_cols=40 Identities=10% Similarity=0.042 Sum_probs=29.5
Q ss_pred EEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCC
Q 008371 156 IVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (568)
Q Consensus 156 vVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G 195 (568)
+|.+..+=+|...+...-.++..|+++|++|+++|.=..|
T Consensus 3 iI~v~s~KGGvGKTt~a~nla~~la~~g~~VlliD~D~q~ 42 (246)
T TIGR03371 3 VIAIVGVKGGVGKTTLTANLASALKLLGEPVLAIDLDPQN 42 (246)
T ss_pred EEEEEeCCCCccHHHHHHHHHHHHHhCCCcEEEEeCCCcc
Confidence 4555555545556666678999999999999999986544
No 296
>COG2240 PdxK Pyridoxal/pyridoxine/pyridoxamine kinase [Coenzyme metabolism]
Probab=23.99 E-value=2.4e+02 Score=28.76 Aligned_cols=64 Identities=27% Similarity=0.287 Sum_probs=41.5
Q ss_pred EeCCCCCCchhHHHHHHHHHHHhCCceEEEE------cCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHH--HCCCCcEE
Q 008371 159 VIPGLTSDSAAAYIKHLAFKMAGHGWNVVVS------NHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHC--QYPEVPLY 230 (568)
Q Consensus 159 llHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~------D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~--~~~~~~i~ 230 (568)
.+||..|.+.. +..+...|++|+++ ++.|+|...+. ..-.+++.++++.+.. ....-..+
T Consensus 10 Vv~G~vGn~AA------~f~lq~~G~~V~~vpTV~fSnHtgyg~~~g~------v~~~e~l~~~l~~l~~~~~~~~~dav 77 (281)
T COG2240 10 VVYGSVGNSAA------IFPLQRLGLDVWAVPTVQFSNHTGYGKWTGI------VMPPEQLADLLNGLEAIDKLGECDAV 77 (281)
T ss_pred EeecccccHhH------HHHHHHcCCceeeeceEEecCCCCCCCCCCc------CCCHHHHHHHHHHHHhcccccccCEE
Confidence 56788775543 34466678887765 68888875432 1234788888888876 33444677
Q ss_pred EEEe
Q 008371 231 AVGT 234 (568)
Q Consensus 231 lvG~ 234 (568)
+.|+
T Consensus 78 ltGY 81 (281)
T COG2240 78 LTGY 81 (281)
T ss_pred EEcc
Confidence 7776
No 297
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=23.91 E-value=1.3e+02 Score=27.31 Aligned_cols=35 Identities=23% Similarity=0.293 Sum_probs=24.9
Q ss_pred EEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCC
Q 008371 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHR 192 (568)
Q Consensus 158 VllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~R 192 (568)
.+..+=+|...+.....++..++++|++|+++|.=
T Consensus 3 ~v~~~kgG~GKtt~a~~la~~l~~~g~~vllvD~D 37 (179)
T cd02036 3 VVTSGKGGVGKTTTTANLGTALAQLGYKVVLIDAD 37 (179)
T ss_pred EEeeCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34443334445566678999999999999999753
No 298
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=23.75 E-value=2e+02 Score=24.42 Aligned_cols=35 Identities=14% Similarity=0.252 Sum_probs=26.8
Q ss_pred EEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCC
Q 008371 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLG 195 (568)
Q Consensus 158 VllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G 195 (568)
|++||-.|+.....++.++..+ |+.++-+|..-..
T Consensus 1 ill~G~~G~GKT~l~~~la~~l---~~~~~~i~~~~~~ 35 (132)
T PF00004_consen 1 ILLHGPPGTGKTTLARALAQYL---GFPFIEIDGSELI 35 (132)
T ss_dssp EEEESSTTSSHHHHHHHHHHHT---TSEEEEEETTHHH
T ss_pred CEEECcCCCCeeHHHHHHHhhc---ccccccccccccc
Confidence 6889999888877777676665 6788888876554
No 299
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=23.72 E-value=1.3e+02 Score=32.95 Aligned_cols=60 Identities=23% Similarity=0.263 Sum_probs=39.7
Q ss_pred cceEEEEeCCCCCCCCCCcc----------------hHHH--h------cCCCEEEEEeCCCCccccccccccCcccHHH
Q 008371 351 VPLLCISTLDDPVCTREAIP----------------WDEC--R------ANEKIILATTRHGGHLAFYEGITAKSLWWVR 406 (568)
Q Consensus 351 vPvLiI~G~dDpivp~~~~~----------------~~~~--~------~~~~~~l~~~~~GGH~~f~eg~~~~~~w~~~ 406 (568)
.++|+.+|+.|-+||.-..+ |... + ...+..++++.++||+.-+. .+.....
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~----~p~~al~ 439 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYD----KPESALI 439 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCC----CcHHHHH
Confidence 89999999999999864222 1110 0 12346778999999977655 3334556
Q ss_pred HHHHHHHH
Q 008371 407 AVNVFLDA 414 (568)
Q Consensus 407 ~i~eFL~~ 414 (568)
.+..|+..
T Consensus 440 m~~~fl~g 447 (454)
T KOG1282|consen 440 MFQRFLNG 447 (454)
T ss_pred HHHHHHcC
Confidence 67777764
No 300
>KOG3551 consensus Syntrophins (type beta) [Extracellular structures]
Probab=23.63 E-value=59 Score=34.23 Aligned_cols=45 Identities=22% Similarity=0.358 Sum_probs=27.3
Q ss_pred CceEEEEEcCCCCEE-EEEEeccCccccCCccccccccCCCCCcEEEEeCCCC
Q 008371 113 SYKRHLFQTPDGGTI-ALDWLTYSDVIQGSTHVNRGILNCEKNPIVVVIPGLT 164 (568)
Q Consensus 113 ~y~r~~~~~~DGg~l-~ldw~~p~~~~~~~~~~~~~~~~~~~~PvVVllHGl~ 164 (568)
+|++-.....||..+ .+|+-.+.+.-+-+.| ...+|+|+++|.+.
T Consensus 450 pFEkLkmSsDDG~r~LyLDFGg~dGEiqLDLh-------scpKpiVFIlHsfL 495 (506)
T KOG3551|consen 450 PFEKLKMSSDDGARMLYLDFGGPDGEIQLDLH-------SCPKPIVFILHSFL 495 (506)
T ss_pred hHHHhccccCCCceEEEEecCCCCccEEeeec-------cCCCcEEEEehhhh
Confidence 556666667788754 6666544331111112 35789999999875
No 301
>TIGR03708 poly_P_AMP_trns polyphosphate:AMP phosphotransferase. Members of this protein family contain a domain duplication. The characterized member from Acinetobacter johnsonii is polyphosphate:AMP phosphotransferase (PAP), which can transfer the terminal phosphate from poly(P) to AMP, yielding ADP. In the opposite direction, this enzyme can synthesize poly(P). Each domain of this protein family is homologous to polyphosphate kinase, an enzyme that can run in the forward direction to extend a polyphosphate chain with a new terminal phosphate from ATP, or in reverse to make ATP (or GTP) from ADP (or GDP).
Probab=23.63 E-value=1.1e+02 Score=33.74 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=36.8
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCC
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG 193 (568)
.+.|+||++-|+-|+....-++.+...+..+|++|..+..+.
T Consensus 37 ~~~~vlIv~eG~DaaGKg~~I~~l~~~ldprg~~v~~~~~P~ 78 (493)
T TIGR03708 37 AGFPVIILIEGWDGAGKGETINLLNEWMDPRGIETHAFGRPS 78 (493)
T ss_pred cCCeEEEEEeCCCCCChHHHHHHHHHHhCcCccEEEeCCCCC
Confidence 467999999999888888888999999999999999987654
No 302
>PLN02209 serine carboxypeptidase
Probab=23.31 E-value=1.4e+02 Score=32.52 Aligned_cols=59 Identities=19% Similarity=0.020 Sum_probs=39.2
Q ss_pred ccceEEEEeCCCCCCCCCCcchHHH-----------------------hcCCC-EEEEEeCCCCccccccccccCcccHH
Q 008371 350 SVPLLCISTLDDPVCTREAIPWDEC-----------------------RANEK-IILATTRHGGHLAFYEGITAKSLWWV 405 (568)
Q Consensus 350 ~vPvLiI~G~dDpivp~~~~~~~~~-----------------------~~~~~-~~l~~~~~GGH~~f~eg~~~~~~w~~ 405 (568)
.+++|+.+|+.|-+|+.-....... +...+ ..++++.++||+.. . .|....
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~----qP~~al 425 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-Y----LPEESS 425 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-c----CHHHHH
Confidence 4799999999999998642211000 12244 88899999999983 2 343455
Q ss_pred HHHHHHHH
Q 008371 406 RAVNVFLD 413 (568)
Q Consensus 406 ~~i~eFL~ 413 (568)
+.+.+|+.
T Consensus 426 ~m~~~fi~ 433 (437)
T PLN02209 426 IMFQRWIS 433 (437)
T ss_pred HHHHHHHc
Confidence 67777764
No 303
>PRK13768 GTPase; Provisional
Probab=23.16 E-value=1.3e+02 Score=30.01 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=29.2
Q ss_pred EEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcC
Q 008371 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNH 191 (568)
Q Consensus 157 VVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~ 191 (568)
++++-|-+|...+.+...++..+..+|.+|+++|.
T Consensus 4 ~i~v~G~~G~GKTt~~~~~~~~l~~~g~~v~~i~~ 38 (253)
T PRK13768 4 IVFFLGTAGSGKTTLTKALSDWLEEQGYDVAIVNL 38 (253)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHhcCCceEEEEC
Confidence 56667777877888888999999999999999874
No 304
>PF01935 DUF87: Domain of unknown function DUF87; InterPro: IPR002789 The function of this domain is unknown. It contains several conserved aspartates and histidines that could be metal ligands.
Probab=23.16 E-value=1.2e+02 Score=29.27 Aligned_cols=36 Identities=22% Similarity=0.329 Sum_probs=30.3
Q ss_pred EEeCCCCCCchhHHHHHHHHHHH-hCCceEEEEcCCC
Q 008371 158 VVIPGLTSDSAAAYIKHLAFKMA-GHGWNVVVSNHRG 193 (568)
Q Consensus 158 VllHGl~G~s~~~y~~~l~~~l~-~~Gy~Vvv~D~RG 193 (568)
+.+=|.+|+..+..+..+++.+. +.|..++++|.=|
T Consensus 26 ~~I~G~TGsGKS~~~~~ll~~l~~~~~~~~ii~D~~G 62 (229)
T PF01935_consen 26 IAIFGTTGSGKSNTVKVLLEELLKKKGAKVIIFDPHG 62 (229)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 34457788888889999999999 8899999999855
No 305
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=23.09 E-value=1.8e+02 Score=30.32 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=26.8
Q ss_pred CCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCC
Q 008371 165 SDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISL 199 (568)
Q Consensus 165 G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~ 199 (568)
|+.....+..++..|.++||++.++- ||+|+...
T Consensus 47 GTGKTP~v~~L~~~L~~~G~~~~IlS-RGYg~~~~ 80 (326)
T PF02606_consen 47 GTGKTPLVIWLARLLQARGYRPAILS-RGYGRKSK 80 (326)
T ss_pred CCCchHHHHHHHHHHHhcCCceEEEc-CCCCCCCC
Confidence 33456777889999999999977774 89998654
No 306
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=23.07 E-value=4.6e+02 Score=27.44 Aligned_cols=94 Identities=15% Similarity=0.126 Sum_probs=63.5
Q ss_pred EEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCc--EEEEEec
Q 008371 158 VVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVP--LYAVGTS 235 (568)
Q Consensus 158 VllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~--i~lvG~S 235 (568)
|+-|..+++..+ -+..-+++..++||.|+.+|--|.=... ....+.+..+.+-++...+..| +.++.-+
T Consensus 197 vI~~~~G~DpAa-VafDAi~~Akar~~DvvliDTAGRLhnk--------~nLM~EL~KI~rV~~k~~~~ap~e~llvlDA 267 (340)
T COG0552 197 VISGKEGADPAA-VAFDAIQAAKARGIDVVLIDTAGRLHNK--------KNLMDELKKIVRVIKKDDPDAPHEILLVLDA 267 (340)
T ss_pred EEccCCCCCcHH-HHHHHHHHHHHcCCCEEEEeCcccccCc--------hhHHHHHHHHHHHhccccCCCCceEEEEEEc
Confidence 444444344443 3346777888899999999976632221 2345777777777766655433 7777788
Q ss_pred HHHHHHHHHHHhcCCCCCceEEEEE
Q 008371 236 IGANILVKYLGENGVNTPLVGAAAI 260 (568)
Q Consensus 236 mGG~ial~ya~~~~~~~~I~a~V~i 260 (568)
.-|.-++.-|..+.+...+.|+|+-
T Consensus 268 ttGqnal~QAk~F~eav~l~GiIlT 292 (340)
T COG0552 268 TTGQNALSQAKIFNEAVGLDGIILT 292 (340)
T ss_pred ccChhHHHHHHHHHHhcCCceEEEE
Confidence 8888888888888776678888874
No 307
>PRK05541 adenylylsulfate kinase; Provisional
Probab=22.53 E-value=1.4e+02 Score=27.44 Aligned_cols=38 Identities=24% Similarity=0.215 Sum_probs=30.6
Q ss_pred CCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEc
Q 008371 153 KNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSN 190 (568)
Q Consensus 153 ~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D 190 (568)
.+|.+|++-|..|+..+...+.++..+...+..++.+|
T Consensus 5 ~~~~~I~i~G~~GsGKst~a~~l~~~l~~~~~~~~~~~ 42 (176)
T PRK05541 5 PNGYVIWITGLAGSGKTTIAKALYERLKLKYSNVIYLD 42 (176)
T ss_pred CCCCEEEEEcCCCCCHHHHHHHHHHHHHHcCCcEEEEe
Confidence 35668999999998888888888888877777777775
No 308
>PLN02924 thymidylate kinase
Probab=22.08 E-value=2e+02 Score=27.96 Aligned_cols=42 Identities=17% Similarity=0.217 Sum_probs=35.1
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCC
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG 193 (568)
...+.+|.+=|..|+..+.-.+.+++.|..+|+.|+....++
T Consensus 13 ~~~g~~IviEGiDGsGKsTq~~~L~~~l~~~g~~v~~~~ep~ 54 (220)
T PLN02924 13 ESRGALIVLEGLDRSGKSTQCAKLVSFLKGLGVAAELWRFPD 54 (220)
T ss_pred CCCCeEEEEECCCCCCHHHHHHHHHHHHHhcCCCceeeeCCC
Confidence 345678888999998888888999999999999998877665
No 309
>cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2.7.1.48), also known as uridine kinase or uridine-cytidine kinase (UCK).
Probab=21.96 E-value=2.9e+02 Score=25.74 Aligned_cols=38 Identities=24% Similarity=0.305 Sum_probs=28.8
Q ss_pred EEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCC
Q 008371 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGL 194 (568)
Q Consensus 157 VVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~ 194 (568)
||.+-|..|+..+.+.+.++..+...|.+|.++..=++
T Consensus 1 ii~i~G~sgsGKttla~~l~~~l~~~~~~~~~i~~Ddf 38 (179)
T cd02028 1 VVGIAGPSGSGKTTFAKKLSNQLRVNGIGPVVISLDDY 38 (179)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEehhhc
Confidence 46677888888888888888888877887777755443
No 310
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=21.58 E-value=1.6e+02 Score=27.87 Aligned_cols=52 Identities=15% Similarity=0.194 Sum_probs=31.0
Q ss_pred HHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEEe
Q 008371 174 HLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVGT 234 (568)
Q Consensus 174 ~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG~ 234 (568)
.+++.+++..-+++++|.--- .......+-+..+++.+++.+|..||+++-+
T Consensus 50 ~~a~~ia~~~a~~~~ld~~~N---------~~~~~~~~~~~~fv~~iR~~hP~tPIllv~~ 101 (178)
T PF14606_consen 50 EVADLIAEIDADLIVLDCGPN---------MSPEEFRERLDGFVKTIREAHPDTPILLVSP 101 (178)
T ss_dssp HHHHHHHHS--SEEEEEESHH---------CCTTTHHHHHHHHHHHHHTT-SSS-EEEEE-
T ss_pred HHHHHHhcCCCCEEEEEeecC---------CCHHHHHHHHHHHHHHHHHhCCCCCEEEEec
Confidence 345555554446666665322 1113456788999999999999999988854
No 311
>PF06624 RAMP4: Ribosome associated membrane protein RAMP4; InterPro: IPR010580 This entry contains Serp1/Ramp4, which has been shown to interacts with target proteins during their translocation into the lumen of the endoplasmic reticulum. It has also been shown to protect unfolded target proteins against degradation during ER stress. It may facilitate glycosylation of target proteins after termination of ER stress and may modulate the use of N-glycosylation sites on target proteins [, ].
Probab=21.45 E-value=58 Score=25.24 Aligned_cols=26 Identities=27% Similarity=0.526 Sum_probs=20.9
Q ss_pred hcCcchhhhHHHHhhccccchhHHHHHHHH
Q 008371 525 HSRISIWLLVCIAITTTWPLVGSALILFLR 554 (568)
Q Consensus 525 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (568)
..-.|-|||+++.+| .+||++|=++|
T Consensus 34 k~pVgp~~L~l~iFV----V~Gs~ifqiir 59 (63)
T PF06624_consen 34 KYPVGPWLLGLFIFV----VCGSAIFQIIR 59 (63)
T ss_pred cCCcCHHHHhhhhee----eEcHHHHHHHH
Confidence 345678999999988 58999987776
No 312
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=21.42 E-value=2.9e+02 Score=24.87 Aligned_cols=72 Identities=10% Similarity=0.117 Sum_probs=41.1
Q ss_pred EEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCCCCCCCCCCcHHHHHHHHHHHHHHCCCCcEEEEE
Q 008371 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLTSDCFYNGGWTEDLRRVIDYLHCQYPEVPLYAVG 233 (568)
Q Consensus 157 VVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~~~~~~~~~~~~Dl~~vi~~l~~~~~~~~i~lvG 233 (568)
-+.-.|..|.........+.+.+ .....++++..-+.-... ......+.+.+..+++.+++..++.++++++
T Consensus 23 ~v~n~g~~G~~~~~~~~~l~~~~-~~~pd~vvl~~G~ND~~~----~~~~~~~~~~l~~li~~~~~~~~~~~vi~~~ 94 (169)
T cd01828 23 KVANRGISGDTTRGLLARLDEDV-ALQPKAIFIMIGINDLAQ----GTSDEDIVANYRTILEKLRKHFPNIKIVVQS 94 (169)
T ss_pred ceEecCcccccHHHHHHHHHHHh-ccCCCEEEEEeeccCCCC----CCCHHHHHHHHHHHHHHHHHHCCCCeEEEEe
Confidence 46778887766555544444444 334577777432211111 1111345578888888888877666766665
No 313
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=21.27 E-value=1.6e+02 Score=24.18 Aligned_cols=34 Identities=21% Similarity=0.382 Sum_probs=22.0
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCC
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRG 193 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG 193 (568)
..+|+|++|++ |.. + ...+..|.+.||+ +.++.|
T Consensus 60 ~~~~ivv~C~~--G~r-s---~~aa~~L~~~G~~--~~~l~G 93 (100)
T cd01523 60 DDQEVTVICAK--EGS-S---QFVAELLAERGYD--VDYLAG 93 (100)
T ss_pred CCCeEEEEcCC--CCc-H---HHHHHHHHHcCce--eEEeCC
Confidence 45688888885 322 2 2456778889999 455544
No 314
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=21.10 E-value=2.6e+02 Score=28.71 Aligned_cols=75 Identities=20% Similarity=0.190 Sum_probs=45.4
Q ss_pred EEEeCCCCCCchhHHHHHHHHHHHhCCceEEEEcCCCCCCCCCC-----CC-----C-CCCCCcHHHHHHHHHHHHHHCC
Q 008371 157 VVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVSNHRGLGGISLT-----SD-----C-FYNGGWTEDLRRVIDYLHCQYP 225 (568)
Q Consensus 157 VVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~-----~~-----~-~~~~~~~~Dl~~vi~~l~~~~~ 225 (568)
+.++-|.+|. +..| +++.|.++||.|..+..|..-.+... .+ + ....+...|...++..+....|
T Consensus 4 ~ALITGITGQ-DGsY---La~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~P 79 (345)
T COG1089 4 VALITGITGQ-DGSY---LAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQP 79 (345)
T ss_pred eEEEecccCC-chHH---HHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCc
Confidence 5688999884 3455 78999999999999998853322211 00 0 1123344577777777766555
Q ss_pred CCcEEEEEec
Q 008371 226 EVPLYAVGTS 235 (568)
Q Consensus 226 ~~~i~lvG~S 235 (568)
..-..+-+.|
T Consensus 80 dEIYNLaAQS 89 (345)
T COG1089 80 DEIYNLAAQS 89 (345)
T ss_pred hhheeccccc
Confidence 5444443333
No 315
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=21.06 E-value=1.5e+02 Score=30.85 Aligned_cols=38 Identities=26% Similarity=0.434 Sum_probs=33.2
Q ss_pred CCCcEEEEeCCCCCCchhHHHHHHHHHHHhCCceEEEE
Q 008371 152 EKNPIVVVIPGLTSDSAAAYIKHLAFKMAGHGWNVVVS 189 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~~~y~~~l~~~l~~~Gy~Vvv~ 189 (568)
+++|.|+++=|..|.....-+-.++.++.++|++|+.-
T Consensus 136 ~~~p~Vil~vGVNG~GKTTTIaKLA~~l~~~g~~Vlla 173 (340)
T COG0552 136 EKKPFVILFVGVNGVGKTTTIAKLAKYLKQQGKSVLLA 173 (340)
T ss_pred CCCcEEEEEEecCCCchHhHHHHHHHHHHHCCCeEEEE
Confidence 46799999999988877777889999999999999875
No 316
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=20.76 E-value=1.7e+02 Score=31.81 Aligned_cols=59 Identities=24% Similarity=0.107 Sum_probs=39.0
Q ss_pred ccceEEEEeCCCCCCCCCCcchHHH-----------------------hcCC-CEEEEEeCCCCccccccccccCcccHH
Q 008371 350 SVPLLCISTLDDPVCTREAIPWDEC-----------------------RANE-KIILATTRHGGHLAFYEGITAKSLWWV 405 (568)
Q Consensus 350 ~vPvLiI~G~dDpivp~~~~~~~~~-----------------------~~~~-~~~l~~~~~GGH~~f~eg~~~~~~w~~ 405 (568)
.+++|+.+|+.|-+|+.-....... +... +..++++.++||+... .|....
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~-----qP~~al 421 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEY-----RPNETF 421 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCC-----CHHHHH
Confidence 4799999999999998642211000 1113 3888899999999842 243455
Q ss_pred HHHHHHHH
Q 008371 406 RAVNVFLD 413 (568)
Q Consensus 406 ~~i~eFL~ 413 (568)
+.+..|+.
T Consensus 422 ~m~~~Fi~ 429 (433)
T PLN03016 422 IMFQRWIS 429 (433)
T ss_pred HHHHHHHc
Confidence 77777774
No 317
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=20.25 E-value=1.3e+02 Score=29.40 Aligned_cols=90 Identities=23% Similarity=0.257 Sum_probs=50.5
Q ss_pred CCCcEEEEeCCCCCCch-hHHHHHHHHHHHhCCceEEEEcCCCCCCCCCC-----CCCCCC-CCcHHHHHHHHH------
Q 008371 152 EKNPIVVVIPGLTSDSA-AAYIKHLAFKMAGHGWNVVVSNHRGLGGISLT-----SDCFYN-GGWTEDLRRVID------ 218 (568)
Q Consensus 152 ~~~PvVVllHGl~G~s~-~~y~~~l~~~l~~~Gy~Vvv~D~RG~G~S~~~-----~~~~~~-~~~~~Dl~~vi~------ 218 (568)
+.++.|.|+|--++++. ..|+....+.|.+.|+.+.-++.----..... .+..|- .|.+-++-..+.
T Consensus 30 g~~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~~~~~~~Ie~~l~~~d~IyVgGGNTF~LL~~lke~gld~ 109 (224)
T COG3340 30 GKRKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSELHLSKPPLAAIENKLMKADIIYVGGGNTFNLLQELKETGLDD 109 (224)
T ss_pred CCCceEEEEecCccccchHHHHHHHHHHHHHcCCeeeeeeccCCCHHHHHHhhhhccEEEECCchHHHHHHHHHHhCcHH
Confidence 34678999997655433 34888899999999998877764211111110 111121 334433332221
Q ss_pred HHHHHCCCCcEEEEEecHHHHHHH
Q 008371 219 YLHCQYPEVPLYAVGTSIGANILV 242 (568)
Q Consensus 219 ~l~~~~~~~~i~lvG~SmGG~ial 242 (568)
-|+++. ..-...+|+|.|++++.
T Consensus 110 iIr~~v-k~G~~YiG~SAGA~ia~ 132 (224)
T COG3340 110 IIRERV-KAGTPYIGWSAGANIAG 132 (224)
T ss_pred HHHHHH-HcCCceEEeccCceeec
Confidence 222222 12357889999998865
No 318
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=20.01 E-value=1.2e+02 Score=34.14 Aligned_cols=47 Identities=9% Similarity=0.122 Sum_probs=35.1
Q ss_pred CC-ccceEEEEeCCCCCCCCCCcch-H--HH----hcCCCEEEEEeCCCCccccc
Q 008371 348 NV-SVPLLCISTLDDPVCTREAIPW-D--EC----RANEKIILATTRHGGHLAFY 394 (568)
Q Consensus 348 ~I-~vPvLiI~G~dDpivp~~~~~~-~--~~----~~~~~~~l~~~~~GGH~~f~ 394 (568)
++ ..|++++||..|-++|.....+ . +. -......++.+.+|-|+.-|
T Consensus 552 ~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfDaf 606 (690)
T PF10605_consen 552 NLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFDAF 606 (690)
T ss_pred CcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeechhh
Confidence 56 7899999999999999874332 1 11 12356899999999999754
Done!